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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010265 Bordetella pertussis strain I669 chromosome, complete genome 4 crisprs DEDDh,cas3,csa3,DinG 0 0 27 0

Results visualization

1. NZ_CP010265
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010265_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010265_2 625048-625157 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010265_3 2907772-2907888 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010265_4 3620445-3620538 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 41 Synechococcus_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_4 233336 : 286924 48 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_5 556358 : 615658 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 621813 : 674672 48 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 723610 : 763560 30 Pseudomonas_phage(33.33%) tRNA,integrase,protease,transposase attL 720858:720876|attR 740746:740764
DBSCAN-SWA_8 773487 : 821105 47 Bovine_alphaherpesvirus(10.0%) tRNA,holin,protease,transposase NA
DBSCAN-SWA_9 1005321 : 1099357 88 Bacillus_virus(30.0%) transposase NA
DBSCAN-SWA_10 1129743 : 1201764 54 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_11 1249158 : 1330033 59 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_12 1449428 : 1501581 46 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_13 1545506 : 1613592 59 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_14 1649541 : 1705132 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_15 1937896 : 2007548 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_16 2019044 : 2068440 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_17 2079644 : 2148020 58 Klosneuvirus(22.22%) tRNA,protease,transposase NA
DBSCAN-SWA_18 2163298 : 2228119 54 Lake_Baikal_phage(18.18%) tRNA,protease,transposase NA
DBSCAN-SWA_19 2506265 : 2564509 54 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_20 2607837 : 2674337 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2872676 : 2946002 53 Catovirus(22.22%) tRNA,protease,transposase NA
DBSCAN-SWA_22 2957727 : 3007340 42 uncultured_Mediterranean_phage(50.0%) tRNA,holin,transposase NA
DBSCAN-SWA_23 3028291 : 3100785 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3114292 : 3168859 45 Bacillus_phage(33.33%) holin,transposase NA
DBSCAN-SWA_25 3233317 : 3306479 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3317766 : 3417879 108 uncultured_Caudovirales_phage(14.29%) tail,terminase,transposase,protease,tRNA NA
DBSCAN-SWA_27 4025588 : 4079020 46 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage