CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011530	Mycobacteroides immunogenum strain CCUG 47286 chromosome, complete genome	1 crisprs	cas3,csa3,DinG,DEDDh,cas4,WYL	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011530_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011530_1

2656501-2656589

Orphan

Consensus_repeat	Method
CCGGCTCCCGGTCAACCCGCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011530_1

>merge|NZ_CP011530|1|2656501-2656589|CRISPRCasFinder
CCGGCTCCCGGTCAACCCGCGCCCAACCCGGAAACGCCTACGACGGTGACGACGCCTCCGCCGGCACCGGCTCCGGGTCAACCCGCGCC

>NZ_CP011530|1|1|2656501-2656589|CRISPRCasFinder
CCGGCTCCCGGTCAACCCGCGCC	CAACCCGGAAACGCCTACGACGGTGACGACGCCTCCGCCGGCA
CCGGCTCCGGGTCAACCCGCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011530.1\|WP_131676283.1\|2664377_2665451_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011530.1\|WP_043078967.1\|2647907_2648600_+\|urease-accessory-protein-UreG	unknown	unknown	gnl\|CDD\|349776
NZ_CP011530.1\|WP_043078960.1\|2655049_2656114_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP011530.1\|WP_043078957.1\|2662269_2662641_+\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|223317
NZ_CP011530.1\|WP_043078965.1\|2650823_2651420_-\|TIGR03086-family-protein	unknown	unknown	gnl\|CDD\|274424
NZ_CP011530.1\|WP_043078953.1\|2665447_2665855_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011530.1\|WP_078343851.1\|2657852_2661701_+\|bifunctional-nitrate-reductase/sulfite-reductase-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|239155
NZ_CP011530.1\|WP_043078962.1\|2653428_2654259_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270256
NZ_CP011530.1\|WP_043078966.1\|2648589_2649249_+\|urease-accessory-protein-UreD	unknown	unknown	gnl\|CDD\|376611
NZ_CP011530.1\|WP_054173196.1\|2663136_2664294_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NZ_CP011530.1\|WP_043078961.1\|2654255_2655050_+\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|130643
NZ_CP011530.1\|WP_043078964.1\|2651471_2652455_-\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274648
NZ_CP011530.1\|WP_043078956.1\|2662651_2663095_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|238182
NZ_CP011530.1\|WP_043078958.1\|2657371_2657647_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP011530.1\|WP_174544362.1\|2649245_2650637_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP011530.1\|WP_078343852.1\|2661802_2662273_+\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809
NZ_CP011530.1\|WP_109475903.1\|2667154_2667949_-\|phosphohydrolase	unknown	unknown	gnl\|CDD\|188314
NZ_CP011530.1\|WP_043078963.1\|2652549_2653233_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|135642
NZ_CP011530.1\|WP_043078952.1\|2665886_2667152_+\|competence/damage-inducible-protein-A	unknown	unknown	gnl\|CDD\|234789
NZ_CP011530.1\|WP_043078968.1\|2647232_2647886_+\|urease-accessory-protein-UreF	unknown	unknown	gnl\|CDD\|223900

Protein	Function_ID	Function_description	E-value
NZ_CP011530.1\|WP_043078967.1\|2647907_2648600_+\|urease-accessory-protein-UreG	gnl\|CDD\|349776	cd05540, UreG, urease accessory protein UreG. UreG is one of the four accessory proteins of urease. Urease is an enzyme which catalyzes the decomposition of urea to form ammonia and carbon dioxide. Bacterial urease is a trimer of three subunits which are encoded by genes ureA, ureB, and ureC. Up to four accessory proteins (ureD, ureE, ureF, and ureG) are required for urease catalytical function. UreG may play an important role in nickel incorporation of the urease metallocenter. UreG is a member of the Fer4_NifH superfamily which contains an ATP-binding domain. Proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.	3.1069e-113
NZ_CP011530.1\|WP_043078960.1\|2655049_2656114_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	6.45894e-68
NZ_CP011530.1\|WP_043078957.1\|2662269_2662641_+\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	4.06838e-26
NZ_CP011530.1\|WP_043078965.1\|2650823_2651420_-\|TIGR03086-family-protein	gnl\|CDD\|274424	TIGR03086, TIGR03086, TIGR03086 family protein. This family, like pfam07398 and TIGRFAMs family TIGR030834, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized.	1.31449e-31
NZ_CP011530.1\|WP_078343851.1\|2657852_2661701_+\|bifunctional-nitrate-reductase/sulfite-reductase-flavoprotein-subunit-alpha	gnl\|CDD\|239155	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. Members of the MopB_Nitrate-R-NapA CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP011530.1\|WP_043078962.1\|2653428_2654259_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270256	cd13538, PBP2_ModA_like_1, Substrate binding domain of putative molybdate-binding protein;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. Molybdate transport system is comprised of a periplasmic binding protein, an integral membrane protein, and an energizer protein. These three proteins are coded by modA, modB, and modC genes, respectively. ModA proteins serve as initial receptors in the ABC transport of molybdate mostly in eubacteria and archaea. After binding molybdate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	9.55975e-80
NZ_CP011530.1\|WP_043078966.1\|2648589_2649249_+\|urease-accessory-protein-UreD	gnl\|CDD\|376611	pfam01774, UreD, UreD urease accessory protein. UreD is a urease accessory protein. Urease pfam00449 hydrolyzes urea into ammonia and carbamic acid. UreD is involved in activation of the urease enzyme via the UreD-UreF-UreG-urease complex and is required for urease nickel metallocenter assembly. See also UreF pfam01730, UreG pfam01495.	2.28389e-11
NZ_CP011530.1\|WP_054173196.1\|2663136_2664294_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	4.72348e-08
NZ_CP011530.1\|WP_043078961.1\|2654255_2655050_+\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|130643	TIGR01581, Molybdenum_transport_system_permease_protein_modB., NifC-like ABC-type porter. This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.	2.65261e-65
NZ_CP011530.1\|WP_043078964.1\|2651471_2652455_-\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274648	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by Rv1855c from Mycobacterium tuberculosis. [Unknown function, Enzymes of unknown specificity].	3.62677e-112
NZ_CP011530.1\|WP_043078956.1\|2662651_2663095_+\|universal-stress-protein	gnl\|CDD\|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	3.4722e-13
NZ_CP011530.1\|WP_043078958.1\|2657371_2657647_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.95042e-11
NZ_CP011530.1\|WP_174544362.1\|2649245_2650637_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	8.1595e-164
NZ_CP011530.1\|WP_078343852.1\|2661802_2662273_+\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	4.57879e-27
NZ_CP011530.1\|WP_109475903.1\|2667154_2667949_-\|phosphohydrolase	gnl\|CDD\|188314	TIGR03401, Uncharacterized_protein_YFL061W/YNL335W, HD domain protein, cyanamide hydratase family. Members of this protein family are known, so far, in the Ascomycota, a branch of the Fungi, and contain an HD domain (pfam01966), found typically in various metal-dependent phosphohydrolases. The only characterized member of this family, from the soil fungus Myrothecium verrucaria, is cyanamide hydratase (EC 4.2.1.69), a zinc-containing homohexamer that adds water to the fertilizer cyanamide (NCNH2), a nitrile compound, to produce urea (NH2-CO-NH2). Homologs are likely to be nitrile hydratases.	6.67285e-10
NZ_CP011530.1\|WP_043078963.1\|2652549_2653233_-\|SDR-family-oxidoreductase	gnl\|CDD\|135642	PRK05884, PRK05884, SDR family oxidoreductase.	5.24845e-120
NZ_CP011530.1\|WP_043078952.1\|2665886_2667152_+\|competence/damage-inducible-protein-A	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	1.97671e-174
NZ_CP011530.1\|WP_043078968.1\|2647232_2647886_+\|urease-accessory-protein-UreF	gnl\|CDD\|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	2.28103e-32

>NZ_CP011530.1|WP_043078960.1|2655049_2656114_+|ABC-transporter-ATP-binding-protein
MSELRFDAGHAGRGVRAAFTVAAGETLAIVGPNGAGKSTVLALVAGLLRPDTGEISLGDHVLAHCGTGTFVPTHRRRTALLLQEALLFPHLSVAGNVEFGIRGGRGDVSTRRDHWLDAVGAGDLATRRPGELSGGQAQRVAIARALATEPDLVLLDEPLVGLDADSAPAIRALLGQVLGRDGQSALIVTHDIMDAVAIADRVMVLDSGRVAELGDTATVLARPTSQFGARFAGVNFVRGIAGEGGALHAGDLVLHGVWSGPGGPAHEQHAVAVFRPRDVAVHLSAPGGSPRNVIAVSITTLTAHDDSVVVTATAGVTIFTAHITAAAAAELRLTPGASAYFAVKAHEVVIQAAQ
>NZ_CP011530.1|WP_043078961.1|2654255_2655050_+|molybdate-ABC-transporter-permease-subunit
MSPAPGLPRWVYLPAAIGAVLIVLPLLALVVKADWAQFPALVGSPASQAALLLSVRTCLASTALCLLFGVPLAVVLARGPRQLTRVLRPMILLPLVLPPVVGGIALLYAFGKLGLLGHYLDAAGIRIAFSTSAVVLAQTFVSLPFLVISLQGALAATGQRYDDVAASLGAPPTTVLRRVSLPLVMPALASGTVLAFARSLGEFGATLTFAGSRQGVTRTLPLEIYLQRESDPQSAVALSLLLVAVAAVVLAVVGARTWRPVGWR
>NZ_CP011530.1|WP_043078962.1|2653428_2654259_+|molybdate-ABC-transporter-substrate-binding-protein
MPVTGSTWIVLTSRTCKFLAATLLSGSLMVAGCGSPTASEEGSTATSAGSGAASVQLHVLAAASLRKAFTDIGKSFESTHAGTTVEFTFAGSSDLVTQLTQGAPADVLATADSATMDKAWKAHSVINPVDFAANTLTIVVAPGNPKGIGGFADLARPGLDVVVCAPQVPCGAAAAATSKEAGVQLNPVSEESSVTDVLNKVIAGQADAGLVYFTDAKAAGDKVTAVRFPEAQSISNTYPIAVTSNSRNPERANQFIETVNGDVGHQILAAAGFSAP
>NZ_CP011530.1|WP_043078963.1|2652549_2653233_-|SDR-family-oxidoreductase
MDVLVTGAVNEVGRAVAAEFRNAGHRVVITGPNADELEIAAKELEVDAIVCDNADPDSLEENVELFPQHLDAIVNIPNPVWSEPGPHLGTLTDTGEAWLSRYESSVLTAVLTVQAIGDHLRSGAAIINLCTLGSRDRSGATTAAKAALSAWTAEQAERMGTRGITINTIAPGQSAEANYDGLDSTEDTHELIAGEIARLALFLTSPQARHITGQTLHVSRGVPAGVS
>NZ_CP011530.1|WP_043078964.1|2651471_2652455_-|LLM-class-F420-dependent-oxidoreductase
MTIRLGYQIPNFSYGTGVAELFPTVVKQVRDAEASGFDTVFVMDHFYQLPMIGTPDQPMLEAYTALGALASATSTIQLSTLVTGNTYRNPTLLAKAVTTLDVVSGGRAILGIGAGWFELEHQQLGFEFGTFTDRFERLSEALEIIPPMLRGERPTFEGKYYRTETALNEPRLRPNIPIMIGGSGEKKTFGLAVKYADHLNLLSSLDEIPHKLAVLRQRCEEAGRDPSTLETSAFFSVFIDDDSATAWKLAAAQLSKNGIDLDTLPDEARAQVLGRTLVGSPDEIAEQVQTRVLDQGIDSVTLNAPANGHLPGVVELIGSTLRPLFKD
>NZ_CP011530.1|WP_043078965.1|2650823_2651420_-|TIGR03086-family-protein
MEVPFSLRPAAAAVEALLPGVRDDALDSPTPCTGLTVRALVNHLMGLSSAFRYAAIPEEAATAGFVPSGPTFTEDLDSQWRTLLPRRLAGLVEAWERPASWVGESTIAGNVMPNDQVAMVALDELVLHGWDLAVATGQPFELPEGTDPGLFGFLSALASDGGIPGLFGPRLPVPPGTGRFDQMLAMSGRDPGWRPEAM
>NZ_CP011530.1|WP_174544362.1|2649245_2650637_-|NAD(P)/FAD-dependent-oxidoreductase
MKDALTPKHRVVIIGSGFGGLTAAKTLKRANVDVTLIARTTHHLFQPLLYQVATGIISEGEIAPPTRQILKDQDNAQVVLGDVTSIDLANQVVHSSLLGHDYSTPYDSLIVAAGAGQSYFGNDHFAEWAPGMKSIDDALELRGRILGAFEQAERSSDPVRRRKLMTFTVVGAGPTGVEMAGQIAELANETLKGTFRNIDSTDARVILLDAAPAVLPPFGPKLGDKARKRLEKLGVEIQLSAMVTDVDRNGLTVKHADGTVERIESWCKVWSAGVSASPLGKNLAEQSGVELDRAGRVKVGPDLSIPGHPNVFVVGDMMAVDGVPGVAQGAIQGGRYAAKQIKAELKGRSPQERPPFKFFDKGSMATVSRYSAVVKIGKIEFSGFIAWLSWLALHLVYLVGFKNRLVTLILWSFAFVTRSRGQMAITEQQAWARTRLDQLEELVAEKNGDEEQATQPETERAAS
>NZ_CP011530.1|WP_043078966.1|2648589_2649249_+|urease-accessory-protein-UreD
MRTDVQIIAEKGRFPRLRCTGSLQGRITDPDTVHLVGIAANPLGGDEISVRIEVGEGATLRVRSVAAAVALPGRVTGRSSTAWDCAVAGELDLDPAPTIVAANASHHSDVTVRGAAGAGLRMRERVQIGRAGESSGFWSGQLHVDINDNPLLRHRIELGAGSVTDDELGCPLALISELRYPTTASAVPEPAGATVLSLAGDASLLTWQGQRLPPLVGLG
>NZ_CP011530.1|WP_043078967.1|2647907_2648600_+|urease-accessory-protein-UreG
MPPHLIDGQPHQHIDRPRRVRQPGEPLRIGIGGPVGSGKTALVAALCRTLRDEISVAVLTNDIYTTEDADFLRRHAVLPDERITAVQTGGCPHTAIRDDITANLDAIEDLIAANDALDLILVESGGDNLTATFSSGLIDVQIFVIDVAGGDKVPRKGGPGVTFSDLLVINKTDLAPMVGADLAVMARDAAAVREGRPTAMISLTEDPAASEVLAWVRAHLAEAHQSDHAH
>NZ_CP011530.1|WP_043078968.1|2647232_2647886_+|urease-accessory-protein-UreF
MDLANTSATTALLLSLADSRLPTGSHVHSGGVEEAIAQGLVWDRSTLMAYLRRRIRTHGLVAGSIAAAISTGRLDPVRADAETDARTPSRAARDASRAQGRGLRRLASIAWPHIDWSPHGRQPHLAVVYGIIGAATGLTGRDIALVVVYTTLTGSATAGQRLLALDPAEVAVGTLELTGLCEQTATLADTELASLSDPLLDVLAEQHLMRERPLFVS
>NZ_CP011530.1|WP_043078958.1|2657371_2657647_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MVLNIIWMIILGLIVGWIARLIVPGKENFGWIATALLGIVGGYVGGTLGSLVFAPHKFTVTPPINHAFLGALVGAVILLVVYKFIAGKTKS
>NZ_CP011530.1|WP_078343851.1|2657852_2661701_+|bifunctional-nitrate-reductase/sulfite-reductase-flavoprotein-subunit-alpha
MTETSAPPAARRAACSYCGVGCGVVVRADDRAAGPVTIATVEGDTLHPSNHGRLCTKGATHAQLMAADGRMTAAHIRAARGQEPVPAPLKTAIAEAGRRLRQVLDTDGPDAIALYVSGQMTLEAQYLANKLAKGYLRTSHIESNSRLCMASAGTGYTQSLGADGPPGSYSDIEHSDLFLVIGANMADCHPILFLRMADRLGSGARLIVVDPRRTATADRADLFLQITAGTDLALLNGLLHLLVENGDIDAEFIAGHTEGWAGMPEFLAGYAPAVVAAITGLAEDDIRTAARWIGEAREWMTLWTMGLNQSTHGTWNTNAICNLHLATGAICRPGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSVKSAADREFVERQWRLAPGSIRAEFGTGTVDMFTQMATGSIKACWIICTNPVASVANRQNVIEGLRRAELVIAQDAFLATATNGYADILLPAALWAESDGVSINSERTATLTSQVVQAPGDAQPDWRLICDIAAAMGFGDAFDYSSSEQIFEEIRAFWNPRTGYDMRGISYARLRQGPVQWPCPSVDSGDRNPIRYLNDGISQHLHTDGADVVPRLAFPTPSRRAVFHARAHRQPAELPGEGYAMVLNTGRLQHHWHTLTKTGRIKTLDRLHPSPFVEIHPHDAATLGIADGDIVEIASRRGSAELPAIVSDKVKRGSCFAPFHWNDAHGPGLTINAVTNDAVDPDSLQPEFKVSAVALRPTGRAVADTAPAKQTKTLGDIAILWTSQTGNAEMAAVSVCRVLRTAGISATITAMDECDPDDLVAVRTAVVIASSFGEGGPPDNGSRFWEALSGYVKPLNHLRYAVLGFGDRAYANFCGHARALDERLCELGASPVLGRVDGEATDRTLVASWTADLLETIGEGATAITETVRTLRSTGLPAAAPERFTRAAPILAALSHNEILSAPGSDKEVRRIEFDLTGHDVAYSVGDALGIYPTNREEDVQRWLEATGLDAGLPIAVDGGELPLATALTDHYDICRVTDDLLRFVAERRRDKHSIKLLRGSDTEARAVWLRGRNALDVIREFPVRADLEEWRQVLIRLTPRQYSISSSPLVSPQAISLAVSIVRYRGPDGSSRGGVGSTFLADRAQRLPVPIFLQRSPHFRPPEASDTPMIMVGPGTGIAPFRGFLQERRALGHTGANWLFFGDQHRSEHFYYRDELDGFLRDGSLRRLDLAFSRDQAKRIYVQHRMMEQGAQLWRWLCGGAHLYVCGDASRMAKDVDSTLLAIAQKYGRLSGEQALEFRKELVAQKRYVRDVY
>NZ_CP011530.1|WP_078343852.1|2661802_2662273_+|CrcB-family-protein
MGPNVTAANRQKPQLPRPYLRPSALFWVFFGGVCGTALRYWFEQLWPASGTSWPWGTFAANLCGAFVLGAVLETLTLLGPDGGWRRHVRLFLGTGFCGAFTTYSALALEISNLSRNGFLVTGVVYALVSVLAGMVAAIGGIATAAKVLARYSGGAE
>NZ_CP011530.1|WP_043078957.1|2662269_2662641_+|fluoride-efflux-transporter-CrcB
MTVLVVVLAGALGAVLRFVVDSAVKQRWTHRFPWTTLFINLTGSAFIGLLAGLVMFHHSAPQLLTVLGTGFCGGYTTFSTASVESVRLVEQRQWSLALYNTFGTLLGTVGACAAGLALGWVLA
>NZ_CP011530.1|WP_043078956.1|2662651_2663095_+|universal-stress-protein
MSESPAAQLVIGWDHYPPSTAALRFAIDMARRLHAHIHVVHIQDMDDEPVDPDCDSWESQSRMAIAEAESAAREELVTGDVSWEYHRAHGPAAVQLLALAQQCDALMIILGSPRGGPASALDTLLGQSVSHRLIGARRVPLVLVPAV
>NZ_CP011530.1|WP_054173196.1|2663136_2664294_+|GNAT-family-N-acetyltransferase
MRSKFSTGSSVHLGPVTIDGVTVLLRPPRLADGPSWRETALAFEERLSPAFDRDDMDWESAHSPVMWVDTWRAASADARAGGVSYLLVRIDDGSERVVGHFLMAGRDHRTGGAEISTWAADVPSAVSAWAQLTTVLSAFDGNPAIPHALAPAAVSNVGANRFAESMGWTQLQTRRALRRYGGQVSDHHIWFLPNTAEYRDWARRRLSAIPFTRAPFTAPAPRMPSAEYLAAWLRFVAIRARLRFGTLRRKAIAESPLEIPSGSGEVARIERGESGQYRVSIGGRPAGSIDVYSDIGTATTELVPRLPLWVSDSARVAVVSGLAGHLAQGPAVSCRTTVVAQESDAMLADRLAALGFADEGTAPAALGEDGPPRRMWTRLRNPDAK
>NZ_CP011530.1|WP_131676283.1|2664377_2665451_+|hypothetical-protein
MRARDRHSAPACLGPVRVDGMTVMLRKPRLSDGPSWRETNLRYERRLAPAFAHQEMSWPEAHSPYMWVHTRRQALADAARGWVSYLLVHLDSGQERVAGHLVMAGRHPRTGGTEVSTWTAGVPHSVTMWAQTALIIAGFEADPHVPHAVAPLAVQNVAVHRLAQAVGWSRLQTCRRLRIFDGAPSDHEIWFQANSAENLAALRGKRDALSNGAPERVRAGRPAIPWSQLLACGHYELRNRLRRTTPNANSTVPVDISGRPAGVIEISVDPGSSTTELIVRAHADAPEDAFTPDLVKLAARVRAAPAPTRRVVVAARADDLVLIEALAAAGFQGEGPTLPTYGESGITRHLWTYLTAD
>NZ_CP011530.1|WP_043078953.1|2665447_2665855_-|hypothetical-protein
MAVGIDEGAVIEYIVTTFPDLQHEVMQGNWFFFSGTDRQVPVITLMSNAAYDSHSDLERPSVYRLNIGVGGTTFTNLLRGQDASSAIDYTEFDRVLPHPEYSGAKWVCVVNPSEDTFAEVVRPLLAEAHARAARD
>NZ_CP011530.1|WP_043078952.1|2665886_2667152_+|competence/damage-inducible-protein-A
MLRAGIVVTGTEVLTGRVADANGPWLSEHLREAGIDVAHICVCGDRKDDLLAQLQFLTDQGVDLIITSGGLGPTADDMTLPTVAEFADTTLVFDAALEAAIMDRLRPMADRWENVDWEALRVGIAKQALVPARGQILDPVGTAPGAIVTAGKVVIVVLPGPPHELQRMWPAVVRAEPFRGLVGDDAVAIEQTILRLYGITEPDIAETLRLAEEALGSLAALEITTCLRRSEVEVVTRFEPSARPAWERLHEFIATRHGAALFSSDGSTVDQVVAALLRGRRLAVAESCTAGLLGARIADVPGSSAYFLGGVISYANDVKIGQLQVDPQLLATHGAVSPQVAAAMADGVLTALGADIAVSTTGVAGPGGGSPDKPVGTVCFCVKTVAGERADLRVVIPGNRNQIRERATTVALHLLRRLLQQ
>NZ_CP011530.1|WP_109475903.1|2667154_2667949_-|phosphohydrolase
MPLAALGALDLTYVMTTFELDWEWATRTGGTITATQRRALLGRLIRTLPGMVSDAVRTRIGRRGQGRVEFGSIAVPDSALALAAEQEARDCVTPHVLEHSYRTYFFGKALAELDGIRVDDELVYVASLLHDLQLEHPTPGRCFAVVGGERAAQFVRDQGAPETRAQAVGAAVAAHITLGASENLSDPGGFVSAGAGTDVFGLRLSDLDTEWVQELLRRHPRLDFKRHMLKAWAAESSAVPSGRAAWLTRYAAFPMLIKAAPFSE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1265488 : 1274749

Mycobacterium_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052511106.1\|1265488_1267543_+	hypothetical protein	A0A1D8EX10	Mycobacterium_phage	5.9e-13	28.8
WP_043079722.1\|1267641_1269273_+	hypothetical protein	NA	NA	NA	NA
WP_043079680.1\|1269305_1269719_+	hypothetical protein	A0A0U1UNR7	Pseudomonas_phage	4.7e-39	60.6
WP_052511105.1\|1269772_1272301_+	hypothetical protein	A0A2L1IWS8	Mycobacterium_phage	5.9e-148	49.4
WP_043079679.1\|1272309_1272630_+	hypothetical protein	NA	NA	NA	NA
WP_165589752.1\|1272631_1272799_+	hypothetical protein	A0A2D1G824	Mycobacterium_phage	1.5e-15	68.6
WP_043079678.1\|1272962_1273907_+	M15 family metallopeptidase	G8I6Q9	Mycobacterium_virus	4.5e-85	56.0
WP_043079677.1\|1273903_1274749_+	PE-PPE domain-containing protein	A0A2D2W371	Mycobacterium_phage	2.6e-44	42.3

DBSCAN-SWA_2

1879772 : 1951988

Mycobacterium_phage(47.06%)

terminase,head,capsid,integrase,portal

attL 1943710:1943724|attR 1953534:1953548

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043076095.1\|1879772_1880186_+	hypothetical protein	A0A160DCS6	Gordonia_phage	5.6e-24	43.8
WP_043075847.1\|1880352_1880580_+	hypothetical protein	NA	NA	NA	NA
WP_043075846.1\|1880576_1881665_+	hypothetical protein	NA	NA	NA	NA
WP_157847520.1\|1881661_1882174_+	hypothetical protein	NA	NA	NA	NA
WP_052510902.1\|1882170_1883148_+	AAA family ATPase	A0A220NS67	Mycobacterium_phage	1.0e-76	47.2
WP_043075844.1\|1883144_1884677_+	DNA cytosine methyltransferase	A0A142KCP3	Gordonia_phage	3.2e-197	64.2
WP_052510901.1\|1884673_1885024_+	hypothetical protein	NA	NA	NA	NA
WP_078343584.1\|1885020_1885758_+	hypothetical protein	A0A142K8V3	Gordonia_phage	6.8e-20	30.4
WP_043075842.1\|1885933_1886791_+	hypothetical protein	E0YQ62	Mycobacterium_phage	1.3e-70	61.2
WP_043075841.1\|1886790_1887168_+	hypothetical protein	G8I4T8	Mycobacterium_phage	3.3e-31	56.7
WP_043075840.1\|1887247_1887775_+	hypothetical protein	NA	NA	NA	NA
WP_078343600.1\|1887780_1888224_+	hypothetical protein	Q6JIG5	Burkholderia_virus	2.5e-38	57.4
WP_043075839.1\|1888500_1889469_+	hypothetical protein	A0A023W5I3	Mycobacterium_phage	1.7e-39	35.2
WP_065212763.1\|1889410_1890037_-	type II toxin-antitoxin system HicB family antitoxin	A0A0K2CZV4	Paenibacillus_phage	6.8e-05	34.1
WP_043076090.1\|1890029_1890293_-	toxin HicA	A0A2P1A0R7	Gordonia_phage	9.8e-06	63.2
WP_043075838.1\|1890413_1890845_-	hypothetical protein	NA	NA	NA	NA
WP_052510900.1\|1891198_1891630_+	hypothetical protein	NA	NA	NA	NA
WP_131676215.1\|1891718_1892522_-	hypothetical protein	NA	NA	NA	NA
WP_043076088.1\|1892610_1892952_+	hypothetical protein	A0A159B6G9	Gordonia_phage	6.7e-31	56.2
WP_043075836.1\|1892959_1893682_-	hypothetical protein	NA	NA	NA	NA
WP_054416702.1\|1893881_1894352_+	hypothetical protein	A0A0S1S0J8	Mycobacterium_phage	4.6e-22	44.2
WP_043075835.1\|1894361_1896014_+\|terminase	terminase	A0A159B6A7	Gordonia_phage	1.1e-198	61.8
WP_078343601.1\|1896090_1897476_+\|portal	phage portal protein	A0A161C2E3	Gordonia_phage	3.0e-146	61.3
WP_052510898.1\|1897459_1898635_+	hypothetical protein	A0A159B6A6	Gordonia_phage	9.9e-66	49.3
WP_109475847.1\|1898707_1899424_+	hypothetical protein	A0A159B6A8	Gordonia_phage	1.6e-26	44.6
WP_052510897.1\|1899438_1899852_+\|head	head decoration protein	A0A162E0Z2	Gordonia_phage	3.1e-30	53.7
WP_043075833.1\|1899866_1900925_+\|capsid	major capsid protein	A0A159B6B2	Gordonia_phage	6.4e-64	37.6
WP_043075832.1\|1900924_1901359_+	hypothetical protein	A0A159B6B3	Gordonia_phage	1.0e-07	32.6
WP_043075831.1\|1901358_1901781_+	hypothetical protein	A0A162E0Z9	Gordonia_phage	1.7e-23	46.9
WP_043075830.1\|1901771_1902095_+	hypothetical protein	NA	NA	NA	NA
WP_043075829.1\|1902097_1902484_+	hypothetical protein	A0A2P1CGB5	Mycobacterium_phage	1.4e-13	43.7
WP_131676213.1\|1902480_1902954_+	hypothetical protein	A0A2P1CG68	Mycobacterium_phage	5.4e-39	51.9
WP_043075827.1\|1902972_1903899_+	Ig-like domain-containing protein	A0A2P1CG50	Mycobacterium_phage	1.5e-80	54.4
WP_043075826.1\|1903975_1904467_+	hypothetical protein	NA	NA	NA	NA
WP_043075825.1\|1904523_1904883_+	hypothetical protein	NA	NA	NA	NA
WP_043075824.1\|1904886_1909860_+	hypothetical protein	A0A076G771	Mycobacterium_phage	6.3e-170	36.3
WP_043075823.1\|1909856_1910807_+	hypothetical protein	A0A2P1CGB7	Mycobacterium_phage	1.1e-112	58.7
WP_052510896.1\|1910803_1912519_+	hypothetical protein	A0A2P1CGW3	Mycobacterium_phage	1.9e-203	59.7
WP_043075822.1\|1912545_1913517_+	hypothetical protein	A0A097EWF4	Mycobacterium_phage	1.3e-58	41.7
WP_043075821.1\|1913509_1913917_+	hypothetical protein	NA	NA	NA	NA
WP_052510895.1\|1913913_1916292_+	hypothetical protein	A0A2P1JZR8	Mycobacterium_phage	1.4e-45	41.9
WP_165589758.1\|1918624_1918768_+	hypothetical protein	NA	NA	NA	NA
WP_043079591.1\|1918764_1919034_+	hypothetical protein	NA	NA	NA	NA
WP_157847534.1\|1919030_1920266_+	N-acetylmuramoyl-L-alanine amidase	A0A088FVW8	Mycobacterium_phage	3.2e-83	45.0
WP_043079590.1\|1921402_1921609_+	hypothetical protein	NA	NA	NA	NA
WP_043079589.1\|1921626_1921875_+	hypothetical protein	NA	NA	NA	NA
WP_043079588.1\|1921871_1922060_+	hypothetical protein	NA	NA	NA	NA
WP_052511096.1\|1922056_1922401_+	hypothetical protein	A0A2K9VEV9	Mycobacterium_phage	1.1e-09	40.0
WP_157847533.1\|1922574_1923252_-	DUF4241 domain-containing protein	NA	NA	NA	NA
WP_043079586.1\|1923335_1924565_-\|integrase	tyrosine-type recombinase/integrase	A0A059VKS6	Mycobacterium_phage	1.4e-118	52.8
WP_043079583.1\|1926691_1927135_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_043079582.1\|1927502_1927898_+	hypothetical protein	NA	NA	NA	NA
WP_043079581.1\|1927897_1928497_+	DUF3558 domain-containing protein	NA	NA	NA	NA
WP_043079580.1\|1928512_1929736_+	hypothetical protein	NA	NA	NA	NA
WP_043079578.1\|1930245_1931283_-	hypothetical protein	NA	NA	NA	NA
WP_131676306.1\|1932904_1933570_-	hypothetical protein	NA	NA	NA	NA
WP_043079576.1\|1933603_1934362_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_043079575.1\|1934677_1935394_-	DUF5642 family protein	NA	NA	NA	NA
WP_043079574.1\|1935453_1936185_+	VIT1/CCC1 transporter family protein	NA	NA	NA	NA
WP_162269252.1\|1936268_1938266_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.8e-12	28.3
WP_043079572.1\|1938265_1939081_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_043079571.1\|1939394_1940657_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_043079570.1\|1940653_1941481_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_054432074.1\|1941524_1941848_+	hypothetical protein	NA	NA	NA	NA
WP_043079568.1\|1941910_1943491_-	PPE family protein	NA	NA	NA	NA
WP_043079567.1\|1943631_1944498_-	sugar ABC transporter permease	NA	NA	NA	NA
1943710:1943724	attL	NA	NA	NA	NA
WP_043079611.1\|1944539_1946054_+	TldD/PmbA family protein	NA	NA	NA	NA
WP_043079566.1\|1946050_1947427_+	peptidase	NA	NA	NA	NA
WP_054173194.1\|1947525_1948188_+	response regulator transcription factor	W8CYM9	Bacillus_phage	6.2e-33	35.7
WP_043079565.1\|1948184_1949201_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_043079564.1\|1949197_1950760_+	DUF4173 domain-containing protein	NA	NA	NA	NA
WP_157847532.1\|1950962_1951988_-\|integrase	tyrosine-type recombinase/integrase	A0A0U4B2E0	Arthrobacter_phage	1.5e-25	33.9
1953534:1953548	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3153713 : 3162165

Streptococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043075497.1\|3153713_3154385_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	5.8e-18	33.8
WP_043075779.1\|3154530_3155337_+	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	1.4e-07	30.9
WP_043075496.1\|3155338_3156208_+	class A beta-lactamase	A0A1B0VBP7	Salmonella_phage	2.5e-53	44.4
WP_043075495.1\|3156317_3158684_-	RelA/SpoT family protein	A0A291L9W9	Bordetella_phage	1.8e-13	38.4
WP_043075494.1\|3158714_3159248_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	6.2e-15	35.7
WP_043075493.1\|3159244_3160921_-	hypothetical protein	NA	NA	NA	NA
WP_174544368.1\|3160920_3162165_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	7.6e-24	30.4

DBSCAN-SWA_4

3708426 : 3713540

Mycobacterium_virus(33.33%)

integrase

attL 3703883:3703896|attR 3716257:3716270

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3703883:3703896	attL	NA	NA	NA	NA
WP_109475864.1\|3708426_3709749_-\|integrase	tyrosine-type recombinase/integrase	G9FH48	Rhodococcus_phage	4.9e-69	39.7
WP_043077924.1\|3709760_3710060_-	hypothetical protein	NA	NA	NA	NA
WP_043077923.1\|3710215_3710419_-	DUF3263 domain-containing protein	Q854V6	Mycobacterium_virus	4.6e-11	55.9
WP_043077922.1\|3710415_3710844_-	hypothetical protein	A0A2P1A0T3	Gordonia_phage	1.1e-35	59.7
WP_052511008.1\|3710921_3711896_-	helix-turn-helix domain-containing protein	Q855G2	Mycobacterium_virus	6.0e-16	52.7
WP_078343295.1\|3712072_3712357_+	helix-turn-helix transcriptional regulator	A0A0A7RVM8	Mycobacterium_phage	2.5e-15	51.2
WP_043077921.1\|3712353_3712707_+	DNA-binding protein	NA	NA	NA	NA
WP_043077920.1\|3712818_3713103_+	hypothetical protein	NA	NA	NA	NA
WP_043077919.1\|3713099_3713540_+	hypothetical protein	A0A2P1JZV0	Mycobacterium_phage	4.1e-33	75.6
3716257:3716270	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3729634 : 3747595

Mycobacterium_phage(56.25%)

tail,portal,terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043077893.1\|3729634_3729871_+	hypothetical protein	A0A142KA58	Gordonia_phage	1.1e-13	57.7
WP_016343093.1\|3729867_3730008_+	hypothetical protein	NA	NA	NA	NA
WP_043077892.1\|3730013_3730202_+	hypothetical protein	NA	NA	NA	NA
WP_043077891.1\|3730198_3730477_+	HNH endonuclease	A0A1D8EQ93	Mycobacterium_phage	2.7e-22	58.0
WP_043077889.1\|3730896_3732744_+\|terminase	terminase	A0A1I9SBW6	Mycobacterium_phage	1.4e-138	52.6
WP_043077888.1\|3732744_3734226_+\|portal	phage portal protein	A0A2P1A0M6	Gordonia_phage	1.0e-131	52.6
WP_043077887.1\|3734206_3735112_+	hypothetical protein	A0A088FUW7	Mycobacterium_phage	4.2e-80	55.2
WP_109475917.1\|3735257_3735806_+	DUF4355 domain-containing protein	A0A166XYP9	Gordonia_phage	1.5e-16	39.4
WP_043077886.1\|3735856_3736231_+	hypothetical protein	A0A2P1A0L4	Gordonia_phage	1.5e-44	70.9
WP_043077885.1\|3736245_3737283_+\|capsid	major capsid protein	A0A166XYQ6	Gordonia_phage	2.9e-117	63.0
WP_062826698.1\|3737282_3737540_+	hypothetical protein	NA	NA	NA	NA
WP_043077883.1\|3737523_3737898_+	hypothetical protein	A0A166XYS3	Gordonia_phage	4.0e-21	45.7
WP_043077882.1\|3737894_3738242_+	hypothetical protein	A0A142KBU5	Gordonia_phage	4.0e-15	37.6
WP_043077881.1\|3738238_3738535_+	hypothetical protein	NA	NA	NA	NA
WP_043077880.1\|3738531_3738939_+	hypothetical protein	NA	NA	NA	NA
WP_043077879.1\|3739000_3739678_+	hypothetical protein	S5YN28	Mycobacterium_phage	4.9e-41	45.1
WP_043077878.1\|3739865_3740330_+	hypothetical protein	NA	NA	NA	NA
WP_043077877.1\|3740434_3740758_+	hypothetical protein	S5Z5T8	Mycobacterium_phage	7.5e-16	56.7
WP_174544337.1\|3740754_3744174_+\|tail	tail tape measure protein	A0A068F1L4	Mycobacterium_phage	2.1e-68	41.7
WP_043077875.1\|3744170_3745400_+	hypothetical protein	M4W8F3	Mycobacterium_phage	6.5e-68	38.3
WP_078343360.1\|3745457_3747122_+	hypothetical protein	M4W9S6	Mycobacterium_phage	8.0e-186	56.5
WP_043077873.1\|3747121_3747595_+	hypothetical protein	A0A1P8DUD8	Mycobacterium_phage	3.5e-14	40.5

DBSCAN-SWA_6

3811842 : 3837857

Mycobacterium_phage(85.71%)

tail,terminase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043077829.1\|3811842_3812226_-	hypothetical protein	A0A222ZQF4	Mycobacterium_phage	2.3e-43	72.2
WP_043077828.1\|3812240_3813395_-	hypothetical protein	A0A0F6SJK6	Mycobacterium_phage	1.2e-07	38.9
WP_165589733.1\|3813396_3813558_-	hypothetical protein	NA	NA	NA	NA
WP_078343304.1\|3813580_3816115_-	hypothetical protein	A0A1I9SC74	Mycobacterium_phage	9.4e-37	29.5
WP_043077827.1\|3816102_3816942_-	hypothetical protein	A0A2H4PFN3	Mycobacterium_phage	9.5e-87	58.0
WP_043077826.1\|3816957_3818661_-	hypothetical protein	A0A097EYM8	Mycobacterium_phage	1.8e-265	77.5
WP_043077825.1\|3818704_3820435_-	hypothetical protein	A0A142K810	Mycobacterium_phage	3.2e-214	62.1
WP_043077824.1\|3820431_3824133_-\|tail	phage tail tape measure protein	Q854Y3	Mycobacterium_virus	9.6e-224	44.3
WP_078343306.1\|3824147_3824510_-	hypothetical protein	A0A0A7RVJ2	Mycobacterium_phage	1.7e-29	57.4
WP_043077822.1\|3824571_3825027_-	hypothetical protein	A0A0A7RVK9	Mycobacterium_phage	7.8e-27	43.6
WP_043077821.1\|3825123_3826209_-	hypothetical protein	A0A2H4PED2	Mycobacterium_phage	5.2e-61	46.1
WP_043077820.1\|3826301_3826712_-	hypothetical protein	NA	NA	NA	NA
WP_043077819.1\|3826708_3827071_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_043077818.1\|3827070_3827478_-	hypothetical protein	NA	NA	NA	NA
WP_043077817.1\|3827477_3827840_-	hypothetical protein	A0A1D8EUW7	Mycobacterium_phage	7.1e-31	58.3
WP_043077816.1\|3827844_3828309_-	hypothetical protein	NA	NA	NA	NA
WP_043077815.1\|3828355_3829261_-	hypothetical protein	A0A2K9VEV5	Mycobacterium_phage	1.0e-139	80.7
WP_043077814.1\|3829276_3829654_-	hypothetical protein	W8EH90	Mycobacterium_phage	6.9e-45	79.2
WP_043077813.1\|3829657_3830908_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A142K8P6	Gordonia_phage	2.1e-85	51.4
WP_043077812.1\|3832313_3833726_-\|terminase	terminase	R4TCB6	Mycobacterium_phage	7.1e-151	56.8
WP_043077811.1\|3833874_3834276_-	hypothetical protein	A0A1D8EWZ5	Mycobacterium_phage	9.6e-21	50.5
WP_043077810.1\|3834436_3834889_-	hypothetical protein	A0A1D8EX78	Mycobacterium_phage	1.6e-51	66.0
WP_052511009.1\|3834885_3835152_-	hypothetical protein	A0A218M9N1	Mycobacterium_phage	2.4e-28	68.2
WP_043077808.1\|3835258_3835657_-	hypothetical protein	A0A2H4PFU6	Mycobacterium_phage	7.6e-10	44.0
WP_043077807.1\|3835653_3836055_-	hypothetical protein	A0A2H4PD32	Mycobacterium_phage	1.7e-33	59.1
WP_054429051.1\|3836054_3836264_-	monovalent cation/H(+) antiporter subunit G	NA	NA	NA	NA
WP_043077805.1\|3836395_3836635_+	DUF2188 domain-containing protein	NA	NA	NA	NA
WP_043077804.1\|3836906_3837857_+	HNH endonuclease	A0A125RNK0	Pseudomonas_phage	6.5e-07	44.9

DBSCAN-SWA_7

3841299 : 3853673

Mycobacterium_phage(68.75%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052511000.1\|3841299_3841833_-	hypothetical protein	A0A2P1JRA4	Mycobacterium_phage	8.6e-33	49.1
WP_043077801.1\|3841829_3842660_-	hypothetical protein	R4T9Y8	Mycobacterium_phage	6.1e-70	56.2
WP_043077800.1\|3842945_3843227_-	hypothetical protein	A0A076G9B0	Mycobacterium_phage	8.8e-13	41.6
WP_043077799.1\|3843223_3843562_-	DUF4326 domain-containing protein	A0A2P1JTB8	Mycobacterium_phage	1.1e-22	53.6
WP_043077798.1\|3843554_3843887_-	hypothetical protein	NA	NA	NA	NA
WP_043077797.1\|3843879_3844935_-	phage Gp37/Gp68 family protein	A0A1B3B211	Gordonia_phage	2.3e-98	56.6
WP_155772773.1\|3845059_3845227_-	hypothetical protein	NA	NA	NA	NA
WP_155772774.1\|3845226_3845364_-	hypothetical protein	A0A0A7RVX1	Mycobacterium_phage	7.8e-07	65.8
WP_078343308.1\|3845527_3845722_-	hypothetical protein	NA	NA	NA	NA
WP_043077796.1\|3845718_3846243_-	hypothetical protein	A0A1J0MDV9	Mycobacterium_phage	1.9e-08	31.7
WP_043077795.1\|3846239_3846656_-	hypothetical protein	NA	NA	NA	NA
WP_043077794.1\|3846652_3847183_-	hypothetical protein	A0A068F2H8	Mycobacterium_phage	2.0e-37	48.6
WP_052510999.1\|3847179_3847692_-	hypothetical protein	A0A249XR93	Mycobacterium_phage	7.4e-50	62.7
WP_043077793.1\|3847702_3848539_-	DUF2303 family protein	G8I4S3	Mycobacterium_phage	9.1e-106	66.9
WP_043077792.1\|3848566_3848908_-	hypothetical protein	G8I4S2	Mycobacterium_phage	5.8e-35	67.3
WP_052510998.1\|3848910_3849942_-	recombinase RecT	A0A1B3AZ29	Gordonia_phage	2.9e-53	43.5
WP_043077791.1\|3849938_3850859_-	YqaJ viral recombinase family protein	A0A2P1N2T8	Gordonia_phage	5.0e-97	61.6
WP_043077790.1\|3850855_3851116_-	hypothetical protein	NA	NA	NA	NA
WP_043077789.1\|3851112_3851523_-	hypothetical protein	A0A160DCS6	Gordonia_phage	5.1e-25	46.7
WP_043077788.1\|3851519_3851843_-	hypothetical protein	NA	NA	NA	NA
WP_043077787.1\|3851839_3852226_-	DUF732 domain-containing protein	NA	NA	NA	NA
WP_043077786.1\|3852328_3853099_-	phage antirepressor KilAC domain-containing protein	A0A142K8T5	Gordonia_phage	1.1e-49	47.3
WP_043077785.1\|3853095_3853395_-	hypothetical protein	NA	NA	NA	NA
WP_043077784.1\|3853391_3853673_-	Cro/Cl family transcriptional regulator	A0A0U4IQZ7	Mycobacterium_phage	8.3e-11	39.7

DBSCAN-SWA_8

3861901 : 3899576

Mycobacterium_phage(75.86%)

tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043077776.1\|3861901_3862450_-	hypothetical protein	A0A2K9VF19	Mycobacterium_phage	3.0e-33	46.7
WP_043077775.1\|3862442_3862811_-	hypothetical protein	A0A2D1G9X1	Mycobacterium_phage	2.3e-08	39.0
WP_043077774.1\|3862998_3863265_-	hypothetical protein	NA	NA	NA	NA
WP_043077773.1\|3863265_3863505_-	membrane protein	NA	NA	NA	NA
WP_043077772.1\|3863520_3864687_-	hypothetical protein	A0A023ZXI5	Mycobacterium_phage	1.4e-149	67.4
WP_043077928.1\|3864793_3865507_-	N-acetylmuramoyl-L-alanine amidase	A0A0A0RKX1	Mycobacterium_phage	3.0e-81	70.7
WP_043077771.1\|3866055_3866319_-	hypothetical protein	NA	NA	NA	NA
WP_165589732.1\|3866377_3866530_-	hypothetical protein	NA	NA	NA	NA
WP_043077770.1\|3866526_3866934_-	hypothetical protein	A0A0U1UNR7	Pseudomonas_phage	1.7e-36	57.0
WP_062826725.1\|3866968_3868621_-	hypothetical protein	A0A1J0M9U9	Mycobacterium_phage	4.6e-16	28.5
WP_043080443.1\|3868722_3870849_-	hypothetical protein	A0A2P1JZR8	Mycobacterium_phage	5.3e-41	39.2
WP_043080442.1\|3870848_3871955_-	hypothetical protein	A0A023ZX82	Mycobacterium_phage	7.8e-113	55.7
WP_043080441.1\|3871951_3872506_-	hypothetical protein	A0A023ZXQ6	Mycobacterium_phage	2.7e-21	38.7
WP_052511143.1\|3872505_3874224_-	hypothetical protein	A0A023ZX29	Mycobacterium_phage	4.4e-264	73.5
WP_043080446.1\|3874220_3875327_-	hypothetical protein	A0A023ZWM1	Mycobacterium_phage	1.7e-147	64.3
WP_043080445.1\|3875331_3879042_-\|tail	phage tail tape measure protein	S5Y5B9	Mycobacterium_phage	6.0e-48	46.4
WP_043080440.1\|3879239_3879539_-	hypothetical protein	NA	NA	NA	NA
WP_043080439.1\|3879544_3880288_-	hypothetical protein	A0A2K9VEZ9	Mycobacterium_phage	3.2e-46	41.8
WP_043080438.1\|3880259_3880544_-	hypothetical protein	NA	NA	NA	NA
WP_016895916.1\|3880560_3881103_-	hypothetical protein	A0A023ZYD0	Mycobacterium_phage	4.3e-64	66.1
WP_043080437.1\|3881123_3881546_-	hypothetical protein	W8EG37	Mycobacterium_phage	5.2e-17	46.2
WP_043080436.1\|3881542_3881785_-	hypothetical protein	NA	NA	NA	NA
WP_043080435.1\|3881784_3882471_-	hypothetical protein	A0A2K9VET7	Mycobacterium_phage	8.2e-36	43.0
WP_043080434.1\|3882464_3882860_-	hypothetical protein	NA	NA	NA	NA
WP_043080433.1\|3882866_3883286_-	hypothetical protein	NA	NA	NA	NA
WP_043080432.1\|3883282_3884227_-	hypothetical protein	A0A142KC12	Gordonia_phage	9.3e-107	60.8
WP_043080431.1\|3884258_3884711_-	hypothetical protein	A0A2P1N303	Gordonia_phage	1.5e-46	70.9
WP_043080430.1\|3884712_3885969_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A0U4IA42	Gordonia_phage	1.0e-63	42.4
WP_043080429.1\|3885968_3887348_-	hypothetical protein	A0A023ZWK5	Mycobacterium_phage	2.4e-143	59.1
WP_043080428.1\|3887398_3889072_-	hypothetical protein	A0A2K9VEU8	Mycobacterium_phage	4.8e-122	46.0
WP_043080444.1\|3889028_3889472_-	hypothetical protein	A0A023ZWK1	Mycobacterium_phage	9.7e-14	44.9
WP_078343311.1\|3889778_3890060_-	hypothetical protein	NA	NA	NA	NA
WP_043080427.1\|3890176_3890611_+	hypothetical protein	NA	NA	NA	NA
WP_109475901.1\|3890616_3890940_-	hypothetical protein	NA	NA	NA	NA
WP_131676357.1\|3890882_3891329_-	hypothetical protein	NA	NA	NA	NA
WP_065212771.1\|3891637_3892534_-	hypothetical protein	A0A023W769	Mycobacterium_phage	7.5e-05	56.2
WP_155772775.1\|3892719_3892893_-	hypothetical protein	NA	NA	NA	NA
WP_165589757.1\|3892895_3893072_-	hypothetical protein	NA	NA	NA	NA
WP_043080422.1\|3893068_3893473_-	hypothetical protein	NA	NA	NA	NA
WP_043080421.1\|3893481_3894159_-	hypothetical protein	A0A1B3AYN8	Gordonia_phage	5.2e-59	56.1
WP_043080420.1\|3894201_3894540_-	WhiB family transcriptional regulator	A0A023ZXD5	Mycobacterium_phage	1.0e-10	45.3
WP_043080419.1\|3894540_3895158_-	hypothetical protein	A0A142KBT1	Gordonia_phage	2.9e-32	41.6
WP_043080418.1\|3895154_3895397_-	hypothetical protein	NA	NA	NA	NA
WP_043080417.1\|3895393_3895759_-	hypothetical protein	NA	NA	NA	NA
WP_043080136.1\|3896531_3896903_-	hypothetical protein	G8I4T1	Mycobacterium_phage	1.2e-49	77.8
WP_043080135.1\|3896902_3897160_-	glutaredoxin family protein	A0A2H4PFR8	Mycobacterium_phage	2.4e-17	53.7
WP_043080133.1\|3897388_3898024_+	hypothetical protein	NA	NA	NA	NA
WP_043080132.1\|3898184_3899576_-	DNA cytosine methyltransferase	A0A142KB20	Gordonia_phage	6.7e-154	52.6

DBSCAN-SWA_9

4710317 : 4718631

Shahe_endorna-like_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043076677.1\|4710317_4711568_+	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	2.1e-05	40.3
WP_043076678.1\|4711747_4712977_+	class I SAM-dependent methyltransferase	A0A1V0SJ83	Klosneuvirus	1.1e-30	24.2
WP_043076679.1\|4712977_4713766_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_078343670.1\|4713873_4715019_-	acyltransferase	A9YX16	Burkholderia_phage	2.5e-21	29.0
WP_043076680.1\|4715063_4716332_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	2.5e-06	38.7
WP_043076681.1\|4716328_4717456_-	acyltransferase	A9YX16	Burkholderia_phage	4.8e-17	27.7
WP_043076682.1\|4717554_4718631_-	NAD(P)-dependent oxidoreductase	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	2.8e-14	22.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage