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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP014951 Mycobacteroides abscessus strain FLAC004 chromosome, complete genome 1 crisprs DEDDh,cas3,csa3,DinG,cas4,WYL 0 1 8 0

Results visualization

1. NZ_CP014951
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014951_1 1024450-1024537 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP014951_1 1.1|1024481|26|NZ_CP014951|CRISPRCasFinder 1024481-1024506 26 NZ_CP032323 Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence 418376-418401 5 0.808
NZ_CP014951_1 1.1|1024481|26|NZ_CP014951|CRISPRCasFinder 1024481-1024506 26 NZ_CP007795 Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence 678153-678178 5 0.808
NZ_CP014951_1 1.1|1024481|26|NZ_CP014951|CRISPRCasFinder 1024481-1024506 26 NZ_CP029333 Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence 54049-54074 6 0.769
NZ_CP014951_1 1.1|1024481|26|NZ_CP014951|CRISPRCasFinder 1024481-1024506 26 NC_022654 Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence 143457-143482 6 0.769

1. spacer 1.1|1024481|26|NZ_CP014951|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.808

aaccccggccagggtggttggggcca	CRISPR spacer
gaccccggccagggtggtcgcggcgg	Protospacer
.*****************.* *** .

2. spacer 1.1|1024481|26|NZ_CP014951|CRISPRCasFinder matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 5, identity: 0.808

aaccccggccagggtggttggggcca	CRISPR spacer
gaccccggccagggtggtcgcggcgg	Protospacer
.*****************.* *** .

3. spacer 1.1|1024481|26|NZ_CP014951|CRISPRCasFinder matches to NZ_CP029333 (Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence) position: , mismatch: 6, identity: 0.769

aaccccggccagggtggttggggcca	CRISPR spacer
ttgcccggcgagggtggttggggcac	Protospacer
   ****** **************  

4. spacer 1.1|1024481|26|NZ_CP014951|CRISPRCasFinder matches to NC_022654 (Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence) position: , mismatch: 6, identity: 0.769

aaccccggccagggtggttggggcca	CRISPR spacer
ttgcccggcgagggtggttggggcac	Protospacer
   ****** **************  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 232683 : 317041 109 Mycobacterium_phage(82.76%) capsid,integrase,protease,transposase,portal,head,tail attL 282843:282856|attR 318377:318390
DBSCAN-SWA_2 492104 : 553824 55 Gordonia_phage(28.57%) holin,integrase,protease attL 552490:552504|attR 553842:553856
DBSCAN-SWA_3 1766750 : 1774948 11 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_4 1783622 : 1813297 29 Mycobacterium_phage(59.09%) portal,terminase,integrase attL 1811266:1811280|attR 1817924:1817938
DBSCAN-SWA_5 2900865 : 2909426 7 Streptococcus_phage(16.67%) NA NA
DBSCAN-SWA_6 4214351 : 4272863 77 Mycobacterium_phage(43.75%) capsid,integrase,protease,portal,terminase,head attL 4226402:4226416|attR 4275154:4275168
DBSCAN-SWA_7 4441224 : 4450723 9 Burkholderia_phage(25.0%) NA NA
DBSCAN-SWA_8 5157713 : 5166085 8 Mycobacterium_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage