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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013347 Paraburkholderia caribensis strain Bcrs1W chromosome 1, complete sequence 6 crisprs DEDDh,csa3,RT,DinG,cas3,c2c9_V-U4,cas14j,WYL 1 4 2 0
NZ_CP013349 Paraburkholderia caribensis strain Bcrs1W chromosome 3, complete sequence 1 crisprs csa3,cas3,WYL 0 0 5 0
NZ_CP013348 Paraburkholderia caribensis strain Bcrs1W chromosome 2, complete sequence 8 crisprs DinG,csa3,cas3,WYL 1 2 0 0

Results visualization

1. NZ_CP013347
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013347_1 1201380-1201530 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013347_2 1470189-1470281 Orphan NA
1 spacers
DinG

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013347_3 2346942-2347034 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013347_4 2465908-2466151 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013347_5 3252458-3252542 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013347_6 3329503-3329587 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP013347_4 4.2|2466089|47|NZ_CP013347|PILER-CR 2466089-2466135 47 NZ_CP013347.1 650462-650508 0 1.0
NZ_CP013347_4 4.2|2466089|47|NZ_CP013347|PILER-CR 2466089-2466135 47 NZ_CP013347.1 651312-651358 0 1.0
NZ_CP013347_4 4.2|2466089|47|NZ_CP013347|PILER-CR 2466089-2466135 47 NZ_CP013347.1 651415-651461 1 0.979

1. spacer 4.2|2466089|47|NZ_CP013347|PILER-CR matches to position: 650462-650508, mismatch: 0, identity: 1.0

ttgcccctgtgcggggcggcacctactctttggttgtcggcgacgcc	CRISPR spacer
ttgcccctgtgcggggcggcacctactctttggttgtcggcgacgcc	Protospacer
***********************************************

2. spacer 4.2|2466089|47|NZ_CP013347|PILER-CR matches to position: 651312-651358, mismatch: 0, identity: 1.0

ttgcccctgtgcggggcggcacctactctttggttgtcggcgacgcc	CRISPR spacer
ttgcccctgtgcggggcggcacctactctttggttgtcggcgacgcc	Protospacer
***********************************************

3. spacer 4.2|2466089|47|NZ_CP013347|PILER-CR matches to position: 651415-651461, mismatch: 1, identity: 0.979

ttgcccctgtgcggggcggcacctactctttggttgtcggcgacgcc	CRISPR spacer
ttgcccctgtgcggggcggcacctgctctttggttgtcggcgacgcc	Protospacer
************************.**********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1313541-1313577 4 0.892
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1313683-1313719 4 0.892
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 2554516-2554552 4 0.892
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1313541-1313577 4 0.892
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1313683-1313719 4 0.892
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1551787-1551823 5 0.865
NZ_CP013347_3 3.1|2346971|35|NZ_CP013347|CRISPRCasFinder 2346971-2347005 35 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1036166-1036200 6 0.829
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1036124-1036160 6 0.838
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 290849-290885 6 0.838
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1349001-1349037 6 0.838
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1316776-1316812 6 0.838
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1551787-1551823 7 0.811
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 9359-9395 7 0.811
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1748901-1748937 7 0.811
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1748963-1748999 7 0.811
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1564533-1564569 8 0.784
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1778485-1778521 8 0.784
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1855994-1856030 9 0.757
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 200388-200424 9 0.757
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1531751-1531787 9 0.757
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 535791-535827 9 0.757
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 726230-726266 9 0.757
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1531751-1531787 10 0.73
NZ_CP013347_5 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder 3252482-3252518 37 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 215035-215071 10 0.73
NZ_CP013347_6 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder 3329527-3329563 37 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1912322-1912358 10 0.73
NZ_CP013347_4 4.1|2465964|69|NZ_CP013347|PILER-CR 2465964-2466032 69 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 290783-290851 18 0.739
NZ_CP013347_4 4.1|2465964|69|NZ_CP013347|PILER-CR 2465964-2466032 69 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1265206-1265274 18 0.739
NZ_CP013347_4 4.1|2465964|69|NZ_CP013347|PILER-CR 2465964-2466032 69 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 215069-215137 20 0.71

1. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

taaagcggatgccagcgcaaaggccaaaccaccaaac	CRISPR spacer
cagcgcggatgccagcgcaaaggccaaaacaccaaac	Protospacer
.*. ************************ ********

2. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

taaagcggatgccagcgcaaaggccaaaccaccaaac	CRISPR spacer
cagcgcggatgccagcgcaaaggccaaaacaccaaac	Protospacer
.*. ************************ ********

3. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

taaagcggatgccagcgcaaaggccaaaccaccaaac	CRISPR spacer
tcacgcggatgccagcgcaaaggcgaacccaccaaac	Protospacer
* * ******************** ** *********

4. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
gtttggtgttttggcctttgcgctggcatccgcgctg	Protospacer
*****.** ************************* * 

5. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
gtttggtgttttggcctttgcgctggcatccgcgctg	Protospacer
*****.** ************************* * 

6. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.865

gtttgatggtt-tggcctttgcgctggcatccgcgatt	CRISPR spacer
-tctggttgttatggcctttgcgctggcatccgcgaat	Protospacer
 *.**.* *** ************************ *

7. spacer 3.1|2346971|35|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

aaccaaaaccccgaacaacgacgcgtgaagtgagc	CRISPR spacer
gaccaaaaccccgaacggcgacgcgtgaagcacgc	Protospacer
.***************..************.. **

8. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.838

taaagcggatgccagcgcaaaggccaaaccaccaaac	CRISPR spacer
attcgcggatgccagcgcaaagaccaaaacaccaaac	Protospacer
    ******************.***** ********

9. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.838

taaagcggatgccagcgcaaaggccaaaccaccaaac	CRISPR spacer
aatcgcggatgccagcgcaaagaccaaaacaccaaaa	Protospacer
 *  ******************.***** ******* 

10. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.838

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
ttttttcgcttttgcctttgcgctggcatccgcgatt	Protospacer
 ***  .* *** ************************

11. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.838

--gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
tcggttggt--tttggcctttgcgctggcattcgcgctt	Protospacer
  * ***.*  ********************.**** **

12. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

taaagcggatgccagcgcaaaggcca-aaccaccaaac	CRISPR spacer
attcgcggatgccagcgcaaaggccataacaaccaga-	Protospacer
    ********************** *** ****.* 

13. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.811

taaagcggatgccagcgcaaaggccaaaccaccaaac	CRISPR spacer
taacgcggatgccagcgcaaaggccaaaaacaccgac	Protospacer
*** ************************    * .**

14. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
ttcggttttttcggcctttgcgctggcatccgcgatt	Protospacer
 *. * *  **.*************************

15. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
atctgtggttttgggctgtgcgctggcatccgcgatt	Protospacer
.*.**  * ***** ** *******************

16. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.784

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
ttttgggttgttgggctttgcgctggcatccgcgatg	Protospacer
 ****.    **** ********************* 

17. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.784

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
gtgcggggtgttgggctttgcgcgggcatccgcgatt	Protospacer
** .*. *  **** ******** *************

18. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.757

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
cccctgtgcgtttgcctttgcgctggcatccgcgatt	Protospacer
 ... .**  ** ************************

19. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.757

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
cccctgtgcgtttgcctttgcgctggcatccgcgatt	Protospacer
 ... .**  ** ************************

20. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.757

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
gcatccgcgatttgcctttgcgctggcatccgcgttt	Protospacer
*. *    * ** ********************* **

21. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.757

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
tccggcttgttttgcttttgcgctggcatccgcgaat	Protospacer
 .. * * **** **.******************* *

22. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.757

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
cccctgtgcgtttgcctttgcgctggcatccgcgatt	Protospacer
 ... .**  ** ************************

23. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

taaagcggatgccagcgcaaaggccaaaccaccaaac	CRISPR spacer
aaacgcggatgccagcgcaaaggcaaatcgcggatgc	Protospacer
 ** ******************** ** *    * .*

24. spacer 5.1|3252482|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.73

taaagcggatgccagcgcaaaggccaaaccaccaaac	CRISPR spacer
taacgcggatgccagcgcaaagcccattcgcggatgc	Protospacer
*** ****************** ***  *    * .*

25. spacer 6.1|3329527|37|NZ_CP013347|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.73

gtttgatggtttggcctttgcgctggcatccgcgatt	CRISPR spacer
ccggtgtgcgtttgcctttgcgctggcatccgcgatg	Protospacer
 .   .**  ** *********************** 

26. spacer 4.1|2465964|69|NZ_CP013347|PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 18, identity: 0.739

attcgttatctagcttcaggcgttgcccctgtgcggggcggcacctactctttggttgtc	CRISPR spacer
attcgttatctagcttcaggcgtcgcccctgtgcggggcggcacctacttt----tcttt	Protospacer
***********************.*************************.*    *. *.

27. spacer 4.1|2465964|69|NZ_CP013347|PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 18, identity: 0.739

attcgttatctagcttcaggcgttgcccctgtgcggggcggcacctactctttggttgtc	CRISPR spacer
attcgttatctagcttcacgcgttgcccctgtgcggggcggcacctacttt----tcttt	Protospacer
****************** ******************************.*    *. *.

28. spacer 4.1|2465964|69|NZ_CP013347|PILER-CR matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 20, identity: 0.71

attcgttatctagcttcaggcgttgcccctgtgcggggcggcacctactctttggttgtc	CRISPR spacer
ttacgttatctagcttcaggcgtcgcccctgtgcggggcggcacctacttt----tcttt	Protospacer
 * ********************.*************************.*    *. *.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1403218 : 1417060 15 Sinorhizobium_phage(50.0%) NA NA
DBSCAN-SWA_2 2983350 : 2996156 11 Pandoravirus(25.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP013349
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013349_1 253652-253733 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1088971 : 1173952 60 Acidithiobacillus_phage(20.0%) transposase,integrase attL 1086592:1086607|attR 1095191:1095206
DBSCAN-SWA_2 1627011 : 1676064 42 Microcystis_virus(33.33%) transposase NA
DBSCAN-SWA_3 1737026 : 1808120 59 Leptospira_phage(11.11%) transposase NA
DBSCAN-SWA_4 1821615 : 1869565 41 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_5 1916300 : 1965289 40 Burkholderia_virus(27.27%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP013348
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013348_1 301584-301672 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013348_2 935211-935342 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013348_3 957966-958056 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013348_4 1182643-1182729 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013348_5 2153934-2154017 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013348_6 2347950-2348043 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013348_7 2365294-2365410 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013348_8 2877040-2877113 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013348.1 926205-926231 1 0.963
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013348.1 504750-504776 2 0.926
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013348.1 504809-504835 2 0.926
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013348.1 504925-504951 2 0.926
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013348.1 504982-505008 2 0.926

1. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to position: 926205-926231, mismatch: 1, identity: 0.963

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cttgcctttgcgatggcgtccgcgatt	Protospacer
************************ **

2. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to position: 504750-504776, mismatch: 2, identity: 0.926

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cttgcctttgcgatggcatccgcgatt	Protospacer
*****************.****** **

3. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to position: 504809-504835, mismatch: 2, identity: 0.926

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cttgcctttgcgatggcatccgcgatt	Protospacer
*****************.****** **

4. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to position: 504925-504951, mismatch: 2, identity: 0.926

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cttgcctttgcgatggcatccgcgatt	Protospacer
*****************.****** **

5. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to position: 504982-505008, mismatch: 2, identity: 0.926

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cttgcctttgcgatggcatccgcgatt	Protospacer
*****************.****** **

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1271532-1271558 3 0.889
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1531761-1531787 3 0.889
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1856656-1856682 4 0.852
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 200447-200473 4 0.852
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1316855-1316881 4 0.852
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 768072-768098 4 0.852
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 895483-895509 4 0.852
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 895601-895627 4 0.852
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 895777-895803 4 0.852
NZ_CP013348_1 1.1|301608|41|NZ_CP013348|CRISPRCasFinder 301608-301648 41 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1856715-1856755 5 0.878
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1314432-1314458 5 0.815
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 1912322-1912348 5 0.815
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 9369-9395 5 0.815
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 214994-215020 5 0.815
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP009547 Burkholderia sp. 2002721687 plasmid pBTU, complete sequence 295453-295479 5 0.815
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013381 Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence 127521-127547 5 0.815
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1314550-1314576 6 0.778
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 215697-215723 6 0.778
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NC_014718 Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence 172986-173012 6 0.778
NZ_CP013348_3 3.1|957998|27|NZ_CP013348|CRISPRCasFinder 957998-958024 27 NZ_CP041045 Paracoccus sp. AK26 plasmid pAK1, complete sequence 151894-151920 7 0.741

1. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.889

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tttgcctttgcgctggcatccgcgttt	Protospacer
.*********** ****.*********

2. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.889

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tttgcctttgcgctggcatccgcgttt	Protospacer
.*********** ****.*********

3. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.852

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tttgcctttgcgctggcatccgcgtta	Protospacer
.*********** ****.******** 

4. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.852

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
ttggcctttgcgctggcatccgcgttt	Protospacer
.* ********* ****.*********

5. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.852

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
ttggcctttgcgctggcatccgcgttt	Protospacer
.* ********* ****.*********

6. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tttgcctttgcgctggcatccgcgtta	Protospacer
.*********** ****.******** 

7. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cttgcctttgcgctggcatccgcgatg	Protospacer
************ ****.****** * 

8. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cttgcctttgcgctggcatccgcgatg	Protospacer
************ ****.****** * 

9. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cttgcctttgcgctggcatccgcgatg	Protospacer
************ ****.****** * 

10. spacer 1.1|301608|41|NZ_CP013348|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.878

taacgcggatgccagcgaaagcaaaggccgaaacaccgaac	CRISPR spacer
attcgcggatgccagcgaaagcaaagcccaaaacaccgaac	Protospacer
   *********************** **.***********

11. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tttgcctttgcgctggcatccgcgcta	Protospacer
.*********** ****.******.* 

12. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.815

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tttgcctttgcgctggcatccgcgatg	Protospacer
.*********** ****.****** * 

13. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.815

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
ttggcctttgcgctggcatccgcgtta	Protospacer
.* ********* ****.******** 

14. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.815

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tttgcctttgcgctggcatccgcgaat	Protospacer
.*********** ****.******  *

15. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 5, identity: 0.815

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cgcgcctttgcaatggcgtccgcgagt	Protospacer
* .********.************  *

16. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 5, identity: 0.815

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
cgcgcctttgcaatggcgtccgcgagt	Protospacer
* .********.************  *

17. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tttgcctttgcgctggcatccgcgcga	Protospacer
.*********** ****.******.  

18. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.778

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tcggcctttgcgctggcatccgcgtta	Protospacer
.. ********* ****.******** 

19. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 6, identity: 0.778

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
attgcctttgcgatggcgtcgtcatgc	Protospacer
 *******************  *.* .

20. spacer 3.1|957998|27|NZ_CP013348|CRISPRCasFinder matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 7, identity: 0.741

cttgcctttgcgatggcgtccgcgttt	CRISPR spacer
tgtgcctttgcgatggcatccgccgcg	Protospacer
. ***************.*****  . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage