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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012279 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence 1 crisprs NA 0 1 5 0
NZ_CP012280 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-5, complete sequence 0 crisprs RT 0 0 0 0
NZ_CP012276 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence 2 crisprs RT 0 2 0 0
NZ_CP012277 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP012281 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-6, complete sequence 0 crisprs RT 0 0 0 0
NZ_CP012275 Pediococcus damnosus strain TMW 2.1533 chromosome, complete genome 4 crisprs RT,DinG,DEDDh,cas3,csa3,csn2,cas2,cas1,cas9,WYL 2 10 101 0
NZ_CP012278 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-3, complete sequence 0 crisprs NA 0 0 6 0
NZ_CP012282 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence 1 crisprs csa3 0 1 0 0

Results visualization

1. NZ_CP012275
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012275_1 1223607-1224568 TypeII NA
14 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012275_2 1803456-1803595 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012275_3 1894531-1894689 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012275_4 2109348-2109502 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP012275_1 1.13|1224435|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224435-1224465 31 NZ_CP012275.1 1475195-1475225 0 1.0
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP012275.1 41253-41307 0 1.0

1. spacer 1.13|1224435|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to position: 1475195-1475225, mismatch: 0, identity: 1.0

tgcgtttgatggtgccaaaaatgtggaagtg	CRISPR spacer
tgcgtttgatggtgccaaaaatgtggaagtg	Protospacer
*******************************

2. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to position: 41253-41307, mismatch: 0, identity: 1.0

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	Protospacer
*******************************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014885 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence 47187-47241 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014887 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-6, complete sequence 18173-18227 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014888 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-7, complete sequence 13070-13124 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014624 Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence 23822-23876 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014628 Lactobacillus backii strain TMW 1.1988 plasmid L11988-4, complete sequence 6073-6127 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014897 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-7, complete sequence 2276-2330 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP012289 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-1, complete sequence 3120-3174 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP012291 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence 113132-113186 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP012291 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence 126737-126791 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP012276 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence 2397-2451 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP012282 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence 35692-35746 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014883 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-2, complete sequence 3282-3336 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014884 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence 12876-12930 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014625 Lactobacillus backii strain TMW 1.1988 plasmid L11988-10, complete sequence 20638-20692 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014633 Lactobacillus backii strain TMW 1.1988 plasmid L11988-9, complete sequence 18129-18183 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014934 Pediococcus claussenii strain TMW 2.53 plasmid pL253-1, complete sequence 25414-25468 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014937 Pediococcus claussenii strain TMW 2.54 plasmid pL254-1, complete sequence 25415-25469 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP014893 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence 9247-9301 1 0.982
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP012292 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-4, complete sequence 35731-35785 1 0.982
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP012276 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence 2397-2455 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP012282 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence 35692-35750 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014883 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-2, complete sequence 3282-3340 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014884 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence 12876-12934 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014625 Lactobacillus backii strain TMW 1.1988 plasmid L11988-10, complete sequence 20638-20696 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014633 Lactobacillus backii strain TMW 1.1988 plasmid L11988-9, complete sequence 18129-18187 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014934 Pediococcus claussenii strain TMW 2.53 plasmid pL253-1, complete sequence 25414-25472 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014937 Pediococcus claussenii strain TMW 2.54 plasmid pL254-1, complete sequence 25415-25473 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014893 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence 9247-9305 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP012291 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence 126737-126795 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP012291 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence 113128-113186 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP012292 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-4, complete sequence 35731-35789 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014885 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence 47183-47241 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014887 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-6, complete sequence 18169-18227 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014888 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-7, complete sequence 13066-13124 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014624 Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence 23818-23876 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014628 Lactobacillus backii strain TMW 1.1988 plasmid L11988-4, complete sequence 6069-6127 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP014897 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-7, complete sequence 2272-2330 1 0.983
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP012289 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-1, complete sequence 3116-3174 1 0.983
NZ_CP012275_3 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder 1894583-1894637 55 NZ_CP012291 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence 89329-89383 2 0.964
NZ_CP012275_4 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder 2109396-2109454 59 NZ_CP012291 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence 89329-89387 2 0.966
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 NC_019526 Enterobacteria phage vB_KleM-RaK2, complete genome 344166-344195 6 0.8
NZ_CP012275_1 1.5|1223907|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1223907-1223936 30 MN693904 Marine virus AFVG_250M977, complete genome 513-542 7 0.767
NZ_CP012275_1 1.6|1223973|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1223973-1224002 30 NC_015383 Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence 267931-267960 7 0.767
NZ_CP012275_1 1.9|1224171|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224171-1224200 30 MW117965 Synechococcus phage S-H38, complete genome 72791-72820 7 0.767
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 MH051916 Enterobacteria phage vB_EcoM_IME340, complete genome 124535-124564 7 0.767
NZ_CP012275_1 1.14|1224502|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224502-1224532 31 NC_011990 Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence 89039-89069 7 0.774
NZ_CP012275_1 1.1|1223643|30|NZ_CP012275|CRISPRCasFinder,CRT 1223643-1223672 30 CP046512 Bacillus cereus strain JHU plasmid p1, complete sequence 129098-129127 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 Y00122 Bacteriophage T4 genes nrdC, 49 and 55 (5' terminus) 1029-1058 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 KM607002 Enterobacteria phage RB55, complete genome 47527-47556 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 KJ477684 Enterobacteria phage T4 strain wild, complete genome 47549-47578 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 HM137666 Enterobacteria phage T4T, complete genome 47549-47578 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 NC_000866 Enterobacteria phage T4, complete genome 47562-47591 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 KX828711 Shigella phage SH7, complete genome 42355-42384 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 KJ477686 Enterobacteria phage T4 strain GT7, complete genome 47549-47578 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 KJ477685 Enterobacteria phage T4 strain 147, complete genome 45441-45470 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 HE956711 Yersinia phage phiD1 complete genome 44164-44193 8 0.733
NZ_CP012275_1 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224303-1224332 30 KM607003 Enterobacteria phage RB59, complete genome 47527-47556 8 0.733
NZ_CP012275_1 1.2|1223709|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1223709-1223738 30 MN694366 Marine virus AFVG_250M1050, complete genome 29824-29853 9 0.7
NZ_CP012275_1 1.13|1224435|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224435-1224465 31 MT932329 Campylobacter phage F379, complete genome 36544-36574 9 0.71
NZ_CP012275_1 1.13|1224435|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224435-1224465 31 NC_019507 Campylobacter phage CP21, complete genome 162218-162248 9 0.71
NZ_CP012275_1 1.13|1224435|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR 1224435-1224465 31 HE815464 Campylobacter phage CP21 complete sequence 162218-162248 9 0.71

1. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014885 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

2. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014887 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-6, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

3. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014888 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-7, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

4. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014624 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

5. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014628 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-4, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

6. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014897 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-7, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

7. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012289 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-1, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

8. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012291 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

9. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012291 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

10. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012276 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

11. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012282 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

12. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014883 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-2, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

13. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014884 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

14. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014625 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-10, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

15. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014633 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-9, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

16. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014934 (Pediococcus claussenii strain TMW 2.53 plasmid pL253-1, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

17. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014937 (Pediococcus claussenii strain TMW 2.54 plasmid pL254-1, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

18. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014893 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

19. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012292 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-4, complete sequence) position: , mismatch: 1, identity: 0.982

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtg	Protospacer
******************************************************.

20. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012276 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

21. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012282 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

22. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014883 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-2, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

23. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014884 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

24. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014625 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-10, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

25. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014633 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-9, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

26. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014934 (Pediococcus claussenii strain TMW 2.53 plasmid pL253-1, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

27. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014937 (Pediococcus claussenii strain TMW 2.54 plasmid pL254-1, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

28. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014893 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

29. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012291 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

30. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012291 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

31. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012292 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-4, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

32. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014885 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

33. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014887 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-6, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

34. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014888 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-7, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

35. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014624 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

36. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014628 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-4, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

37. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP014897 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-7, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

38. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012289 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-1, complete sequence) position: , mismatch: 1, identity: 0.983

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************************************************.

39. spacer 3.1|1894583|55|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012291 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence) position: , mismatch: 2, identity: 0.964

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggta	CRISPR spacer
gggtctctgtcaaatcgtattgatggagattttgaacggcacattcacttcggtg	Protospacer
**********************.*******************************.

40. spacer 4.1|2109396|59|NZ_CP012275|CRISPRCasFinder matches to NZ_CP012291 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence) position: , mismatch: 2, identity: 0.966

gggtctctgtcaaatcgtattggtggagattttgaacggcacattcacttcggtgaata	CRISPR spacer
gggtctctgtcaaatcgtattgatggagattttgaacggcacattcacttcggtgaatg	Protospacer
**********************.***********************************.

41. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 6, identity: 0.8

ttagttcaacattaggatctgcatataata-	CRISPR spacer
gaagtttaacattaggatctgcat-tagcat	Protospacer
  ****.***************** **..* 

42. spacer 1.5|1223907|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to MN693904 (Marine virus AFVG_250M977, complete genome) position: , mismatch: 7, identity: 0.767

acgtatgtgtgatgaaatgccagataagat	CRISPR spacer
tcgtatgtgtgattaaatgcaagaggattt	Protospacer
 ************ ****** *** .*  *

43. spacer 1.6|1223973|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 7, identity: 0.767

tccggtgcggaatcaatttgcgattgagta	CRISPR spacer
tccggtgcggattcaatgtgcgattcgcct	Protospacer
*********** ***** ******* . . 

44. spacer 1.9|1224171|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to MW117965 (Synechococcus phage S-H38, complete genome) position: , mismatch: 7, identity: 0.767

acgttcctgccattggcagcacaaactttt	CRISPR spacer
aacatcctgccattggcatcataaacttgc	Protospacer
*   ************** **.****** .

45. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to MH051916 (Enterobacteria phage vB_EcoM_IME340, complete genome) position: , mismatch: 7, identity: 0.767

ttagttcaacattaggatctgcatataata	CRISPR spacer
ctagttcaacagtaggaactgcataatacc	Protospacer
.********** ***** *******  *. 

46. spacer 1.14|1224502|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to NC_011990 (Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence) position: , mismatch: 7, identity: 0.774

tttcaaccagctttcttggcttttggaaagt	CRISPR spacer
tatatgacagctttcttggcttttgcatagt	Protospacer
* *  . ****************** * ***

47. spacer 1.1|1223643|30|NZ_CP012275|CRISPRCasFinder,CRT matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

atgtgtatacagtcaagcttttttacatta	CRISPR spacer
cctctcatatagtccagcttttttacatta	Protospacer
 . . .***.**** ***************

48. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to Y00122 (Bacteriophage T4 genes nrdC, 49 and 55 (5' terminus)) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

49. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to KM607002 (Enterobacteria phage RB55, complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

50. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to KJ477684 (Enterobacteria phage T4 strain wild, complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

51. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to HM137666 (Enterobacteria phage T4T, complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

52. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to NC_000866 (Enterobacteria phage T4, complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

53. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to KX828711 (Shigella phage SH7, complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

54. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to KJ477686 (Enterobacteria phage T4 strain GT7, complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

55. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to KJ477685 (Enterobacteria phage T4 strain 147, complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

56. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to HE956711 (Yersinia phage phiD1 complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

57. spacer 1.11|1224303|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to KM607003 (Enterobacteria phage RB59, complete genome) position: , mismatch: 8, identity: 0.733

ttagttcaacattaggatctgcatataata	CRISPR spacer
ccagttcaacagtaggaactgcataatacc	Protospacer
..********* ***** *******  *. 

58. spacer 1.2|1223709|30|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to MN694366 (Marine virus AFVG_250M1050, complete genome) position: , mismatch: 9, identity: 0.7

tgccctcaacaacgttagccaacgccacac	CRISPR spacer
aattagcaacaacgtcagccaatgccacag	Protospacer
 ...  *********.******.****** 

59. spacer 1.13|1224435|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 9, identity: 0.71

tgcgtttgatggtgccaaaaatgtggaagtg	CRISPR spacer
aatatttgatggtgccaaaagtgtagacata	Protospacer
 ...****************.***.** .*.

60. spacer 1.13|1224435|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 9, identity: 0.71

tgcgtttgatggtgccaaaaatgtggaagtg	CRISPR spacer
aatatttgatggtgccaaaagtgtagacata	Protospacer
 ...****************.***.** .*.

61. spacer 1.13|1224435|31|NZ_CP012275|CRISPRCasFinder,CRT,PILER-CR matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 9, identity: 0.71

tgcgtttgatggtgccaaaaatgtggaagtg	CRISPR spacer
aatatttgatggtgccaaaagtgtagacata	Protospacer
 ...****************.***.** .*.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 9879 9 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_2 14847 : 18770 4 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 23856 : 25218 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_4 31511 : 33482 2 Lactococcus_phage(100.0%) transposase NA
DBSCAN-SWA_5 37148 : 41238 5 Enterococcus_phage(50.0%) transposase NA
DBSCAN-SWA_6 50108 : 52127 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_7 68220 : 70542 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_8 85227 : 151527 53 Mycobacterium_phage(21.43%) tRNA,transposase,protease NA
DBSCAN-SWA_9 154931 : 164711 9 Salmonella_virus(20.0%) NA NA
DBSCAN-SWA_10 176863 : 177709 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_11 181033 : 186381 4 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_12 190898 : 196167 4 Lactobacillus_phage(33.33%) NA NA
DBSCAN-SWA_13 199528 : 200137 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_14 204234 : 205119 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_15 217475 : 286451 61 Streptococcus_phage(23.81%) tRNA,transposase,protease NA
DBSCAN-SWA_16 289542 : 293850 4 Klosneuvirus(50.0%) tRNA NA
DBSCAN-SWA_17 301254 : 305003 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_18 311030 : 322167 7 Vibrio_phage(50.0%) tRNA NA
DBSCAN-SWA_19 326543 : 332474 7 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_20 336811 : 421585 73 Bacillus_virus(12.0%) tRNA,transposase,protease NA
DBSCAN-SWA_21 438917 : 440147 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_22 461184 : 519364 56 Mycobacterium_phage(15.0%) tRNA,transposase,protease NA
DBSCAN-SWA_23 525483 : 528496 4 Escherichia_phage(50.0%) transposase NA
DBSCAN-SWA_24 537006 : 537669 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_25 541341 : 542388 1 Bodo_saltans_virus(100.0%) tRNA NA
DBSCAN-SWA_26 547493 : 549794 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_27 553634 : 554279 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_28 558179 : 575686 13 Mycobacterium_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_29 578736 : 579477 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_30 593395 : 667059 54 Staphylococcus_phage(29.41%) tRNA,transposase,protease NA
DBSCAN-SWA_31 674388 : 725087 43 Escherichia_phage(10.53%) tRNA,transposase NA
DBSCAN-SWA_32 730072 : 733022 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_33 737834 : 740498 1 Catovirus(100.0%) tRNA NA
DBSCAN-SWA_34 744011 : 745259 1 Mycobacterium_phage(100.0%) transposase NA
DBSCAN-SWA_35 749887 : 754753 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_36 759820 : 771209 12 Staphylococcus_phage(40.0%) transposase NA
DBSCAN-SWA_37 780611 : 785418 5 Aeromonas_phage(33.33%) NA NA
DBSCAN-SWA_38 789955 : 833914 48 Bacillus_phage(27.27%) bacteriocin,transposase,protease NA
DBSCAN-SWA_39 838054 : 929862 82 Streptococcus_phage(21.05%) tRNA,transposase,holin,protease NA
DBSCAN-SWA_40 939030 : 942084 2 Moumouvirus(50.0%) tRNA NA
DBSCAN-SWA_41 945150 : 948332 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_42 972278 : 977524 3 Bacillus_virus(66.67%) NA NA
DBSCAN-SWA_43 982303 : 986693 3 Streptococcus_phage(66.67%) transposase NA
DBSCAN-SWA_44 992229 : 993729 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_45 999655 : 1007578 6 Tupanvirus(33.33%) tRNA,protease NA
DBSCAN-SWA_46 1019473 : 1025109 8 Pneumococcus_phage(25.0%) NA NA
DBSCAN-SWA_47 1035161 : 1039613 4 Only_Syngen_Nebraska_virus(50.0%) NA NA
DBSCAN-SWA_48 1053299 : 1053917 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_49 1058543 : 1124607 55 Streptococcus_phage(18.18%) transposase,protease NA
DBSCAN-SWA_50 1131955 : 1133203 1 Mycobacterium_phage(100.0%) transposase NA
DBSCAN-SWA_51 1142641 : 1144612 2 Lactococcus_phage(100.0%) transposase NA
DBSCAN-SWA_52 1148140 : 1158155 5 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_53 1166446 : 1170595 2 Only_Syngen_Nebraska_virus(50.0%) NA NA
DBSCAN-SWA_54 1173907 : 1174432 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_55 1182398 : 1187923 5 Indivirus(33.33%) NA NA
DBSCAN-SWA_56 1193516 : 1248414 48 Pseudomonas_phage(25.0%) transposase,holin NA
DBSCAN-SWA_57 1252422 : 1261288 10 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_58 1273752 : 1274982 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_59 1280695 : 1285556 6 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_60 1296632 : 1299146 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_61 1302814 : 1306567 6 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 1324104 : 1326046 2 Bacillus_virus(50.0%) transposase NA
DBSCAN-SWA_63 1336692 : 1348530 11 Wolbachia_phage(40.0%) transposase NA
DBSCAN-SWA_64 1352962 : 1361534 8 Klosneuvirus(25.0%) NA NA
DBSCAN-SWA_65 1366380 : 1366773 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_66 1370823 : 1372140 1 Phaeocystis_globosa_virus(100.0%) NA NA
DBSCAN-SWA_67 1379722 : 1380970 1 Mycobacterium_phage(100.0%) transposase NA
DBSCAN-SWA_68 1394246 : 1402902 7 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_69 1409758 : 1422725 11 Bacillus_phage(42.86%) NA NA
DBSCAN-SWA_70 1426488 : 1428459 2 Lactococcus_phage(100.0%) transposase NA
DBSCAN-SWA_71 1434834 : 1436064 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_72 1442906 : 1451345 8 Streptococcus_phage(50.0%) transposase NA
DBSCAN-SWA_73 1459201 : 1470323 14 Cedratvirus(20.0%) NA NA
DBSCAN-SWA_74 1481118 : 1484028 5 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_75 1498205 : 1499591 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_76 1503370 : 1510108 6 Mycobacterium_phage(25.0%) transposase NA
DBSCAN-SWA_77 1516472 : 1519512 2 Cronobacter_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_78 1532048 : 1533020 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_79 1541003 : 1541489 1 Molluscum_contagiosum_virus(100.0%) NA NA
DBSCAN-SWA_80 1544697 : 1546530 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_81 1559862 : 1560789 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_82 1570541 : 1579374 10 Bacillus_phage(40.0%) transposase NA
DBSCAN-SWA_83 1583188 : 1584661 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_84 1602460 : 1603519 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_85 1609515 : 1611867 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_86 1616391 : 1628296 12 Staphylococcus_phage(16.67%) NA NA
DBSCAN-SWA_87 1641256 : 1713449 50 Streptococcus_phage(36.36%) transposase,integrase attL 1688307:1688324|attR 1690111:1690128
DBSCAN-SWA_88 1720423 : 1723545 3 Streptococcus_phage(50.0%) transposase NA
DBSCAN-SWA_89 1729806 : 1731837 1 Klosneuvirus(100.0%) tRNA NA
DBSCAN-SWA_90 1747447 : 1755662 8 Indivirus(33.33%) NA NA
DBSCAN-SWA_91 1774671 : 1775367 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_92 1779836 : 1782333 2 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_93 1786630 : 1949748 146 Mycobacterium_phage(15.22%) tRNA,transposase NA
DBSCAN-SWA_94 1969326 : 1974937 5 Planktothrix_phage(40.0%) transposase NA
DBSCAN-SWA_95 2005187 : 2006228 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_96 2013213 : 2014419 1 Streptococcus_phage(100.0%) transposase NA
DBSCAN-SWA_97 2018452 : 2021405 2 Hokovirus(50.0%) transposase NA
DBSCAN-SWA_98 2035574 : 2036753 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_99 2045246 : 2045669 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_100 2050399 : 2078829 29 Bacillus_phage(14.29%) NA NA
DBSCAN-SWA_101 2089363 : 2145672 62 Mycobacterium_phage(31.25%) tRNA,transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP012279
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012279_1 3413-3569 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP012279 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence 3450-3532 23 0.723
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP045730 Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence 3542-3624 23 0.723
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP044413 Lactobacillus sp. JM1 plasmid unnamed1, complete sequence 16706-16788 23 0.723
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP014889 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-8, complete sequence 6175-6257 24 0.711
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP014631 Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence 25032-25114 24 0.711
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP029972 Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence 20634-20716 24 0.711
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP029972 Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence 20688-20770 24 0.711
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NC_011352 Lactobacillus paracasei plasmid plca36, complete sequence 462-544 24 0.711
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP031183 Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_A, complete sequence 816-898 24 0.711
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP044414 Lactobacillus sp. JM1 plasmid unnamed2, complete sequence 25960-26042 24 0.711
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP008839 Lactobacillus gasseri DSM 14869 plasmid pEB01-1, complete sequence 37234-37316 24 0.711
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP012287 Pediococcus damnosus strain TMW 2.1534 plasmid pL21534-4, complete sequence 30312-30394 35 0.578
NZ_CP012279_1 1.1|3450|83|NZ_CP012279|CRISPRCasFinder 3450-3532 83 NZ_CP012274 Pediococcus damnosus strain TMW 2.1532 plasmid pL21532-5, complete sequence 31520-31602 35 0.578

1. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP012279 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-4, complete sequence) position: , mismatch: 23, identity: 0.723

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
************************************************************

2. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP045730 (Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence) position: , mismatch: 23, identity: 0.723

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
************************************************************

3. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP044413 (Lactobacillus sp. JM1 plasmid unnamed1, complete sequence) position: , mismatch: 23, identity: 0.723

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
************************************************************

4. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP014889 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-8, complete sequence) position: , mismatch: 24, identity: 0.711

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttggatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
*****************.******************************************

5. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP014631 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence) position: , mismatch: 24, identity: 0.711

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttggatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
*****************.******************************************

6. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP029972 (Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence) position: , mismatch: 24, identity: 0.711

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttggatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
*****************.******************************************

7. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP029972 (Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence) position: , mismatch: 24, identity: 0.711

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttggatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
*****************.******************************************

8. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NC_011352 (Lactobacillus paracasei plasmid plca36, complete sequence) position: , mismatch: 24, identity: 0.711

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttgaaacccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
******************* ****************************************

9. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP031183 (Lactobacillus brevis strain UCCLB95 plasmid pUCCLB95_A, complete sequence) position: , mismatch: 24, identity: 0.711

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttggatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
*****************.******************************************

10. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP044414 (Lactobacillus sp. JM1 plasmid unnamed2, complete sequence) position: , mismatch: 24, identity: 0.711

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttgaaacccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
******************* ****************************************

11. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP008839 (Lactobacillus gasseri DSM 14869 plasmid pEB01-1, complete sequence) position: , mismatch: 24, identity: 0.711

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tccgcatgacttcgttgaaacccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
******************* ****************************************

12. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP012287 (Pediococcus damnosus strain TMW 2.1534 plasmid pL21534-4, complete sequence) position: , mismatch: 35, identity: 0.578

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tggacaagaaacgccgaaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
*  .** **  .  . .*******************************************

13. spacer 1.1|3450|83|NZ_CP012279|CRISPRCasFinder matches to NZ_CP012274 (Pediococcus damnosus strain TMW 2.1532 plasmid pL21532-5, complete sequence) position: , mismatch: 35, identity: 0.578

tccgcatgacttcgttgaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	CRISPR spacer
tggacaagaaacgccgaaatcccttgctacgagcggaatttcgaaaatcgaaagtccgca	Protospacer
*  .** **  .  . .*******************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 4092 3 Clostridioides_phage(50.0%) NA NA
DBSCAN-SWA_2 13800 : 14955 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 19662 : 21798 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_4 28478 : 33788 6 Vibrio_phage(25.0%) transposase NA
DBSCAN-SWA_5 37327 : 37915 1 Bacillus_phage(100.0%) integrase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP012282
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012282_1 9329-9483 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP012282 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence 9364-9448 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP014926 Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-2, complete sequence 8117-8201 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP014935 Pediococcus claussenii strain TMW 2.53 plasmid pL253-2, complete sequence 4405-4489 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP014938 Pediococcus claussenii strain TMW 2.54 plasmid pL254-2, complete sequence 4405-4489 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP012292 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-4, complete sequence 9364-9448 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP019747 Lactobacillus brevis strain TMW 1.2111 plasmid pl12111-4, complete sequence 36397-36481 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP014885 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence 32761-32845 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP014877 Lactobacillus backii strain TMW 1.1989 plasmid pL11989-4, complete sequence 20125-20209 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP014628 Lactobacillus backii strain TMW 1.1988 plasmid L11988-4, complete sequence 11513-11597 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP019738 Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-4, complete sequence 33714-33798 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP018797 Lactobacillus parabuchneri strain FAM21731 plasmid pFAM21731.1, complete sequence 57121-57205 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP014903 Lactobacillus backii strain TMW 1.2002 plasmid pL12002-4, complete sequence 56863-56947 25 0.706
NZ_CP012282_1 1.1|9364|85|NZ_CP012282|CRISPRCasFinder 9364-9448 85 NZ_CP014895 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-5, complete sequence 20198-20282 25 0.706

1. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP012282 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-7, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

2. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP014926 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-2, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

3. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP014935 (Pediococcus claussenii strain TMW 2.53 plasmid pL253-2, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

4. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP014938 (Pediococcus claussenii strain TMW 2.54 plasmid pL254-2, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

5. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP012292 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-4, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

6. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP019747 (Lactobacillus brevis strain TMW 1.2111 plasmid pl12111-4, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

7. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP014885 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

8. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP014877 (Lactobacillus backii strain TMW 1.1989 plasmid pL11989-4, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

9. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP014628 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-4, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

10. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP019738 (Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-4, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

11. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP018797 (Lactobacillus parabuchneri strain FAM21731 plasmid pFAM21731.1, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

12. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP014903 (Lactobacillus backii strain TMW 1.2002 plasmid pL12002-4, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

13. spacer 1.1|9364|85|NZ_CP012282|CRISPRCasFinder matches to NZ_CP014895 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-5, complete sequence) position: , mismatch: 25, identity: 0.706

aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	CRISPR spacer
aatcagcatgagaccgttgaatcccttgatacaagcagacttccgaaaaacggaaatcag	Protospacer
************************************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP012276
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012276_1 4934-5023 Orphan NA
1 spacers
RT

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012276_2 25049-25180 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP012276_1 1.1|4958|42|NZ_CP012276|CRISPRCasFinder 4958-4999 42 NZ_CP012276 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence 4958-4999 0 1.0
NZ_CP012276_1 1.1|4958|42|NZ_CP012276|CRISPRCasFinder 4958-4999 42 NZ_CP014883 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-2, complete sequence 5844-5885 0 1.0
NZ_CP012276_1 1.1|4958|42|NZ_CP012276|CRISPRCasFinder 4958-4999 42 NZ_CP014885 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence 44638-44679 0 1.0
NZ_CP012276_1 1.1|4958|42|NZ_CP012276|CRISPRCasFinder 4958-4999 42 NZ_CP014887 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-6, complete sequence 15624-15665 0 1.0
NZ_CP012276_1 1.1|4958|42|NZ_CP012276|CRISPRCasFinder 4958-4999 42 NZ_CP014888 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-7, complete sequence 10521-10562 0 1.0
NZ_CP012276_1 1.1|4958|42|NZ_CP012276|CRISPRCasFinder 4958-4999 42 NZ_CP014893 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence 11809-11850 0 1.0
NZ_CP012276_1 1.1|4958|42|NZ_CP012276|CRISPRCasFinder 4958-4999 42 NZ_CP014897 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-7, complete sequence 11714-11755 0 1.0
NZ_CP012276_1 1.1|4958|42|NZ_CP012276|CRISPRCasFinder 4958-4999 42 NZ_CP012291 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence 91825-91866 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP031186 Lactobacillus brevis strain SA-C12 plasmid pSAC12_A, complete sequence 12403-12448 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP021481 Lactobacillus brevis strain SRCM101174 plasmid pLB1174-3 sequence 12236-12281 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP024059 Lactobacillus plantarum strain KACC 92189 plasmid unnamed1 49686-49731 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP035028 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence 6172-6217 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP035028 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence 51589-51634 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP014624 Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence 26414-26459 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP035023 Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC 6172-6217 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP035023 Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC 51590-51635 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP017699 Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 plasmid pLDW-5, complete sequence 17314-17359 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP031176 Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_B, complete sequence 28262-28307 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP046663 Lactobacillus plantarum strain 83-18 plasmid p83-18.3, complete sequence 8115-8160 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NC_021233 Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp1, complete sequence 29746-29791 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP042372 Lactobacillus malefermentans strain CBA3618 plasmid unnamed1, complete sequence 38670-38715 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP024414 Lactobacillus plantarum strain ATCC 8014 plasmid pLP49, complete sequence 42638-42683 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP025692 Lactobacillus plantarum strain IRG1 plasmid pIRG102, complete sequence 3751-3796 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP015859 Lactobacillus plantarum strain LZ227 plasmid LZ227p4, complete sequence 6655-6700 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP015859 Lactobacillus plantarum strain LZ227 plasmid LZ227p4, complete sequence 75456-75501 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP035560 Lactobacillus plantarum strain SRCM103297 plasmid unnamed4 13850-13895 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP032748 Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed4, complete sequence 32088-32133 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP012276 Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence 25112-25157 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP014884 Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence 32536-32581 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP023491 Lactobacillus plantarum strain NCIMB 700965 plasmid unamed1, complete sequence 59353-59398 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP014916 Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-1, complete sequence 27822-27867 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP016800 Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-3, complete sequence 11416-11461 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP019752 Lactobacillus brevis strain TMW 1.2113 plasmid pl12113-2, complete sequence 820-865 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP015339 Lactobacillus brevis strain 100D8 plasmid unnamed1, complete sequence 38308-38353 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP026506 Lactobacillus plantarum strain NCIMB700965.EF.A plasmid punamed1, complete sequence 58757-58802 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP047123 Lactobacillus hilgardii strain FLUB plasmid unnamed2 32913-32958 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP048922 Lactobacillus plantarum strain X7022 plasmid unnamed1, complete sequence 1252-1297 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP028263 Lactobacillus plantarum strain SRCM102737 plasmid unnamed2, complete sequence 37968-38013 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NC_020822 Lactobacillus brevis KB290 plasmid pKB290-4, complete sequence 8725-8770 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP014893 Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence 38731-38776 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP028242 Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence 71289-71334 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP013153 Lactobacillus plantarum strain MF1298 plasmid pMF1298-3, complete sequence 38502-38547 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP012291 Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence 111631-111676 0 1.0
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP012659 Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK05, complete sequence 17052-17097 1 0.978
NZ_CP012276_2 2.2|25112|46|NZ_CP012276|CRISPRCasFinder 25112-25157 46 NZ_CP031211 Lactobacillus brevis strain UCCLB521 plasmid pUCCLB521_C, complete sequence 15249-15294 1 0.978

1. spacer 1.1|4958|42|NZ_CP012276|CRISPRCasFinder matches to NZ_CP012276 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence) position: , mismatch: 0, identity: 1.0

caataaggttaaaccccaagtttaaccatgaaagtatttctg	CRISPR spacer
caataaggttaaaccccaagtttaaccatgaaagtatttctg	Protospacer
******************************************

2. spacer 1.1|4958|42|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014883 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-2, complete sequence) position: , mismatch: 0, identity: 1.0

caataaggttaaaccccaagtttaaccatgaaagtatttctg	CRISPR spacer
caataaggttaaaccccaagtttaaccatgaaagtatttctg	Protospacer
******************************************

3. spacer 1.1|4958|42|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014885 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence) position: , mismatch: 0, identity: 1.0

caataaggttaaaccccaagtttaaccatgaaagtatttctg	CRISPR spacer
caataaggttaaaccccaagtttaaccatgaaagtatttctg	Protospacer
******************************************

4. spacer 1.1|4958|42|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014887 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-6, complete sequence) position: , mismatch: 0, identity: 1.0

caataaggttaaaccccaagtttaaccatgaaagtatttctg	CRISPR spacer
caataaggttaaaccccaagtttaaccatgaaagtatttctg	Protospacer
******************************************

5. spacer 1.1|4958|42|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014888 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-7, complete sequence) position: , mismatch: 0, identity: 1.0

caataaggttaaaccccaagtttaaccatgaaagtatttctg	CRISPR spacer
caataaggttaaaccccaagtttaaccatgaaagtatttctg	Protospacer
******************************************

6. spacer 1.1|4958|42|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014893 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence) position: , mismatch: 0, identity: 1.0

caataaggttaaaccccaagtttaaccatgaaagtatttctg	CRISPR spacer
caataaggttaaaccccaagtttaaccatgaaagtatttctg	Protospacer
******************************************

7. spacer 1.1|4958|42|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014897 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-7, complete sequence) position: , mismatch: 0, identity: 1.0

caataaggttaaaccccaagtttaaccatgaaagtatttctg	CRISPR spacer
caataaggttaaaccccaagtttaaccatgaaagtatttctg	Protospacer
******************************************

8. spacer 1.1|4958|42|NZ_CP012276|CRISPRCasFinder matches to NZ_CP012291 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence) position: , mismatch: 0, identity: 1.0

caataaggttaaaccccaagtttaaccatgaaagtatttctg	CRISPR spacer
caataaggttaaaccccaagtttaaccatgaaagtatttctg	Protospacer
******************************************

9. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP031186 (Lactobacillus brevis strain SA-C12 plasmid pSAC12_A, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

10. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP021481 (Lactobacillus brevis strain SRCM101174 plasmid pLB1174-3 sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

11. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP024059 (Lactobacillus plantarum strain KACC 92189 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

12. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP035028 (Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

13. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP035028 (Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

14. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014624 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

15. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP035023 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

16. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP035023 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pC) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

17. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP017699 (Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 plasmid pLDW-5, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

18. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP031176 (Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_B, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

19. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP046663 (Lactobacillus plantarum strain 83-18 plasmid p83-18.3, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

20. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NC_021233 (Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

21. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP042372 (Lactobacillus malefermentans strain CBA3618 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

22. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP024414 (Lactobacillus plantarum strain ATCC 8014 plasmid pLP49, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

23. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP025692 (Lactobacillus plantarum strain IRG1 plasmid pIRG102, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

24. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP015859 (Lactobacillus plantarum strain LZ227 plasmid LZ227p4, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

25. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP015859 (Lactobacillus plantarum strain LZ227 plasmid LZ227p4, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

26. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP035560 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed4) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

27. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP032748 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

28. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP012276 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

29. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014884 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-3, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

30. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP023491 (Lactobacillus plantarum strain NCIMB 700965 plasmid unamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

31. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014916 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

32. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP016800 (Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-3, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

33. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP019752 (Lactobacillus brevis strain TMW 1.2113 plasmid pl12113-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

34. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP015339 (Lactobacillus brevis strain 100D8 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

35. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP026506 (Lactobacillus plantarum strain NCIMB700965.EF.A plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

36. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP047123 (Lactobacillus hilgardii strain FLUB plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

37. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP048922 (Lactobacillus plantarum strain X7022 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

38. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP028263 (Lactobacillus plantarum strain SRCM102737 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

39. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NC_020822 (Lactobacillus brevis KB290 plasmid pKB290-4, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

40. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP014893 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-3, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

41. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP028242 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

42. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP013153 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-3, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

43. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP012291 (Pediococcus damnosus strain TMW 2.1535 plasmid pL21535-3, complete sequence) position: , mismatch: 0, identity: 1.0

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
**********************************************

44. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP012659 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK05, complete sequence) position: , mismatch: 1, identity: 0.978

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
ttttttctcaaaagccgttaaattaagattgactgcaagtatccta	Protospacer
***.******************************************

45. spacer 2.2|25112|46|NZ_CP012276|CRISPRCasFinder matches to NZ_CP031211 (Lactobacillus brevis strain UCCLB521 plasmid pUCCLB521_C, complete sequence) position: , mismatch: 1, identity: 0.978

tttcttctcaaaagccgttaaattaagattgactgcaagtatccta	CRISPR spacer
tttcttctcaaaagccgttaaattaagattaactgcaagtatccta	Protospacer
******************************.***************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. NZ_CP012278
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 7860 6 Streptococcus_phage(50.0%) transposase NA
DBSCAN-SWA_2 12809 : 14956 3 Bacillus_phage(66.67%) transposase NA
DBSCAN-SWA_3 19269 : 21168 3 Lactobacillus_phage(66.67%) transposase NA
DBSCAN-SWA_4 25250 : 29954 5 Vibrio_phage(33.33%) transposase NA
DBSCAN-SWA_5 45023 : 49237 3 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_6 54089 : 60942 8 Paramecium_bursaria_Chlorella_virus(25.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage