CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015098	Streptomyces qaidamensis strain S10 chromosome, complete genome	16 crisprs	c2c9_V-U4,csa3,DEDDh,WYL,cas4,cas3,Cas9_archaeal,DinG	2	8	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015098_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_1

1702176-1702294

Orphan

Consensus_repeat	Method
GTGGGGGCGCTGTCCGGGAGGCGTCGTGCCGCGCGGGGGCGTCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_1

>merge|NZ_CP015098|1|1702176-1702294|CRISPRCasFinder
GTGGGGGCGCTGTCCGGGAGGCGTCGTGCCGCGCGGGGGCGTCTGAGTGGGCGGTGGCGGATGTGTCCGGGTGAGTGGGGGCGCTGTCCGGGAGGCGTCGTGCCGCGCGGGGTCGTCTG

>NZ_CP015098|1|1|1702176-1702294|CRISPRCasFinder
GTGGGGGCGCTGTCCGGGAGGCGTCGTGCCGCGCGGGGGCGTCTG	AGTGGGCGGTGGCGGATGTGTCCGGGTGA
GTGGGGGCGCTGTCCGGGAGGCGTCGTGCCGCGCGGGGTCGTCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062925754.1\|1695468_1696038_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_033309656.1\|1709431_1709896_-\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|335420
NZ_CP015098.1\|WP_062925753.1\|1694329_1695472_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP015098.1\|WP_062925766.1\|1709914_1712587_-\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP015098.1\|WP_062925761.1\|1704459_1704975_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NZ_CP015098.1\|WP_031138970.1\|1700361_1700928_-\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
NZ_CP015098.1\|WP_062925760.1\|1703371_1704463_-\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|234565
NZ_CP015098.1\|WP_079128890.1\|1702349_1703207_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|237030
NZ_CP015098.1\|WP_062925756.1\|1697326_1698304_-\|aspartate-carbamoyltransferase-catalytic-subunit	unknown	unknown	gnl\|CDD\|234849
NZ_CP015098.1\|WP_031138968.1\|1699924_1700359_-\|transcription-antitermination-factor-NusB	unknown	unknown	gnl\|CDD\|234686
NZ_CP015098.1\|WP_062925752.1\|1691028_1694337_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP015098.1\|WP_018570201.1\|1699239_1699743_+\|transcriptional-regulator-BldD	unknown	unknown	gnl\|CDD\|319351
NZ_CP015098.1\|WP_062925762.1\|1704971_1706156_-\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
NZ_CP015098.1\|WP_062925755.1\|1696034_1697321_-\|dihydroorotase	unknown	unknown	gnl\|CDD\|236479
NZ_CP015098.1\|WP_062925764.1\|1706714_1707554_-\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
NZ_CP015098.1\|WP_062925763.1\|1706297_1706663_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062925765.1\|1707534_1709310_-\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|376862
NZ_CP015098.1\|WP_062925757.1\|1698406_1698973_-\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	unknown	unknown	gnl\|CDD\|235365
NZ_CP015098.1\|WP_062925758.1\|1700981_1702097_-\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238525
NZ_CP015098.1\|WP_062925767.1\|1712586_1712940_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062925761.1\|1704459_1704975_-\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	7.94342e-69
NZ_CP015098.1\|WP_033309656.1\|1709431_1709896_-\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|335420	pfam03652, RuvX, Holliday junction resolvase. This family of nucleases resolves the Holliday junction intermediates in genetic recombination.	2.93361e-53
NZ_CP015098.1\|WP_062925753.1\|1694329_1695472_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP015098.1\|WP_062925766.1\|1709914_1712587_-\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP015098.1\|WP_062925765.1\|1707534_1709310_-\|endolytic-transglycosylase-MltG	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	3.36754e-82
NZ_CP015098.1\|WP_031138970.1\|1700361_1700928_-\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	7.42344e-109
NZ_CP015098.1\|WP_062925760.1\|1703371_1704463_-\|3-dehydroquinate-synthase	gnl\|CDD\|234565	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed.	4.29557e-175
NZ_CP015098.1\|WP_079128890.1\|1702349_1703207_-\|AAA-family-ATPase	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	8.08721e-09
NZ_CP015098.1\|WP_062925756.1\|1697326_1698304_-\|aspartate-carbamoyltransferase-catalytic-subunit	gnl\|CDD\|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	0
NZ_CP015098.1\|WP_031138968.1\|1699924_1700359_-\|transcription-antitermination-factor-NusB	gnl\|CDD\|234686	PRK00202, nusB, transcription antitermination factor NusB.	1.56386e-49
NZ_CP015098.1\|WP_062925752.1\|1691028_1694337_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP015098.1\|WP_018570201.1\|1699239_1699743_+\|transcriptional-regulator-BldD	gnl\|CDD\|319351	cd16837, BldD_C_like, C-terminal domain of BldD and similar transcription factors. The Streptomyces transcription factor BldD dimerizes via an unusual mechanism that inolves a tetrameric c-di-GMP assembly. BdlD is involved in controlling multicellular differentiation in sporulating actinomycetes.	3.58309e-31
NZ_CP015098.1\|WP_062925762.1\|1704971_1706156_-\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
NZ_CP015098.1\|WP_062925755.1\|1696034_1697321_-\|dihydroorotase	gnl\|CDD\|236479	PRK09357, pyrC, dihydroorotase; Validated.	0
NZ_CP015098.1\|WP_062925764.1\|1706714_1707554_-\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	2.377e-88
NZ_CP015098.1\|WP_062925757.1\|1698406_1698973_-\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	6.95336e-92
NZ_CP015098.1\|WP_062925758.1\|1700981_1702097_-\|aminopeptidase-P-family-protein	gnl\|CDD\|238525	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.	1.62046e-93

>NZ_CP015098.1|WP_062925758.1|1700981_1702097_-|aminopeptidase-P-family-protein
MSEVYAARRTRLRDYCNAGGSAAALVSRPANVRYLAGAAPHGAVLLLGRTEEQDLLVRAGPTADRPTQERPDEALRVQTLPGVGGGDPAVAAAGLAAGQGADSLAVEEHHLTVARHRALGSVAPRLRLTGLGSAVEQLRVVKDEEEISCLRIGAEIADQALGELLESILVGRTERHLALELERRLVDHGADGPAFPTSVATGPNAGRPGHRPTDRRVEEGDFLSVCLGAAYRGYRCEIGRTFVIGTAPADWQIELYELVFAAQRAGRESLVPGAACRDVDRAARQVLDSAGYTEGLTALTGHGVGLEIDEDPQLSPAAMGKLDACVPVTVEPGVHLPGRGGVRIDDTLVVRPEADGGPELLTITTKELLAL
>NZ_CP015098.1|WP_031138970.1|1700361_1700928_-|elongation-factor-P
MASTNDLKNGMVLKLEGGQLWSVVEFQHVKPGKGPAFVRTKLKNVLSGKVVDKTFNAGVKVETATVDKRDMQFSYMDGEYFVFMDMETYDQLHVDRKAVGDAANFLIEGFTATVAQHEGEVLFVELPAAVELVIQETEPGVQGDRSTGGTKPAILETGHQINVPLFITTGEKIKVDTRTSDYLGRVNS
>NZ_CP015098.1|WP_031138968.1|1699924_1700359_-|transcription-antitermination-factor-NusB
MAARNTARKRAFQILFEGDQRGAEVLTVLADWVRLSRADTRQPPVSEYTMELVEGYAEHAKRIDELIAQYSVGWTLDRMPVVDRNILRLGAYELIWVDATPDAVVLDEMVQLAKEFSTDESPSFVNGLLGRLKELKPSLRRDEV
>NZ_CP015098.1|WP_018570201.1|1699239_1699743_+|transcriptional-regulator-BldD
MSSEYAKQLGAKLRAIRTQQGLSLHGVEEKSQGRWKAVVVGSYERGDRAVTVQRLAELADFYGVPVQELLPGTTPGGAAEPPPKLVLDLERLATVPAEKAGPLQRYAATIQSQRGDYNGKVLSIRQDDLRTLAVIYDQSPSVLTEQLISWGVLDADARRAVASHEEA
>NZ_CP015098.1|WP_062925757.1|1698406_1698973_-|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR
MDTHDTQSDARPVLEGPDIARVLTRIAHEIVERAKGADDVVLLGIPTRGVFLARRIADKLEQITERKVPCGSLDITMYRDDLRMHPPRALARTEIPGDGLDGKLVVLVDDVLFSGRTIRAALDALNDLGRPRAVQLAVLVDRGHRELPIRADYVGKNLPTSLRETVKVQLAEEDGRDTVLLGAKPTPR
>NZ_CP015098.1|WP_062925756.1|1697326_1698304_-|aspartate-carbamoyltransferase-catalytic-subunit
MQRHLISAADLTRDDAVLILDTAEEMARVADRPIKKLPTLRGRTIVNLFFEDSTRTRISFEAAEKRLSADVINFSAKGSSVSKGESLKDTAQTLEAMGVDAVVIRHGASGAPYRLANSGWIDAAVVNAGDGTHQHPTQALLDAFTMRRRLIGPDAGLGQDLEGKRITLVGDVLHSRVARSNVDLLHTLGAEVTLVAPPTLVPVGVGNWPCEVSYDLDSTLPKSDAVMMLRVQRERMNAAFFPTEREYSRRYGLDGERMARMPEHAIVMHPGPMVRGMEITAEVADSDRCTVVEQVANGVSIRMAVLYLLLGGNEPAVTHPRTEEK
>NZ_CP015098.1|WP_062925755.1|1696034_1697321_-|dihydroorotase
MSKILIRGAKVLGGEPQDVLIDGQTIAEVGVIPEAEADQVVEADGKVLLPGLVDLHTHLREPGREDSETVLTGTRAAASGGYTTVFAMANTFPVADTAGVVEQVWRLGKEHGYCDVQPIGAVTVGLEGRKLAELGAMHESAAGVTVFSDDGKCVHDAVIMRRALEYVKAFGGVVAQHAQEPRLTEGAEMNEGIVSAELGLGGWPAVAEESIIARDVLLADHVGSRVHICHLSTAGSVEIVRWAKSRGIAVTAEVTPHHLLLTDELVRTYNPVYKVNPPLRTERDVMALREALADGTIDIVATDHAPHPHEDKDCEWAAAAMGMVGLETALSVVQETMVDTGLLDWAGVADRMSVKPAQIGQATGHGRPVSAGEPANLTLVDTAYRGLVEPAGFASRSRNTPYEGRELPGRVTHTWLRGKATLVDGKLT
>NZ_CP015098.1|WP_062925754.1|1695468_1696038_-|hypothetical-protein
MTPVLLLAAEKESAQVTDWAARIGWVVGLALFVALVYWLMREGWKWRGTLQGDLPELPTTPDDPGPAKLSLSGRYHGSTTAGQWLDRIVAHGLGTRSRAELTLTDAGLDVVRPGATDFFVPAAQLREARLDKGIAGKVLTEGGLLVVTWAHGDRLIDSGFRSDRAAEHNEWVEAINSMIETNTREGAER
>NZ_CP015098.1|WP_062925753.1|1694329_1695472_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MTTSTRGAVKTPAVLVLEDGRIFRGRAYGAVGETFGEAVFSTGMTGYQETLTDPSYHRQVVVMTAPHVGNTGVNDEDMESKRIWVSGYVVRDPARVPSSWRSRRTLDEELDAQGVVGISGIDTRALTRHLRERGAMRVGIFSGGAVQDDAALLARVQEAPQMKGANLSAEVATTEPYVVPAIGEKKFTVAAVDLGIKGMTPHRMAERGIEVHVLPATATVEDVYAVNPDGVFFSNGPGDPATADHPVSVMQGVLERGTPLFGICFGNQILGRALGFGTFKLKYGHRGINQPVQDRTTGKVEVTAHNHGFAVDAPLDQVSETPFGRAEVSHVCLNDNVVEGLQLLDRPAFSVQYHPEAAAGPHDAAYLFDRFVKLMEGQRA
>NZ_CP015098.1|WP_062925752.1|1691028_1694337_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIQSVLVIGSGPIVIGQAAEFDYSGTQACRVLKAEGLRVVLVNSNPATIMTDPEIADATYVEPITPEFVEKIIAKERPDALLPTLGGQTALNTAISLHEAGTLDKYGVELIGANVEAINKGEDRDLFKEVVEAVRQKIGHGESARSVICHSMDDVLAGVDTLGGYPVVVRPSFTMGGAGSGFAHDEEELRRIAGQGLTLSPTTEVLLEESILGWKEYELELMRDKHDNVVVVCSIENFDPMGVHTGDSITVAPAMTLTDREYQTLRDIGIAVIREVGVDTGGCNIQFAVNPEDGRVIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITQETPASFEPTLDYVVVKAPRFAFEKFPSADATLTTTMKSVGEAMAIGRNFTEAFQKALRSLEKKGSQFTFVGEPGDKSQLLEQAVRPTDGRINTVMQAIRAGATPEEIFEYTKIDPWFVDQLFLIKEIADELAEAPELTTDLLAEAKRHGFSDQQIGEIRGLREDVVREVRHALGIRPVYKTVDTCAAEFAAKTPYFYSSYDEETEVASREKPAVIILGSGPNRIGQGIEFDYSCVHASFALSDAGYETVMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHAEQQAGPVAGVVVQLGGQTPLGLSQALKDNGVPIVGTSPEAIHAAEDRGAFGRVLKEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPSYVLGGRGMEIVYDETRLESYIAESTEISPSRPVLVDRFLDDAIEIDVDALYDGEELYLGGVMEHIEEAGIHSGDSACALPPITLGGFDIKRLRASTEGIAKGVGVRGLINIQFALAGDILYVLEANPRASRTVPFTSKATAVPLAKAAARISLGATIAELRAEGLLPATGDGGELPFDAPISVKEAVMPWSRFRDIHGRGVDTVLGPEMRSTGEVMGIDSVFGTAYAKSQAGAYGPLPTKGRAFISVANRDKRSMIFPARELVAHGFELLATSGTAEVLKRNGINATIVRKQSEGTGPNGEKTIVQLIHDGEVDLIVNTPYGTGGRLDGYDIRTAAVARSVPCLTTVQALAAAVQGIDALNRGDVSVRSLQEHAEHLTAARD
>NZ_CP015098.1|WP_079128890.1|1702349_1703207_-|AAA-family-ATPase
MQHAVGSPLPPPHQPGHGPATGWSPAAQHPVPPNAGAHQGPVPVPPPPPAPGYPAPPPGPGPAATSVPPTPETTGHVPLPPGGPVAMPMAPPAATVPDPAGTTLAVLLIGPAGAGKTSVAKYWADHRRVPTAHISLDDVREWVRSGFADPQSGWNDNSEAQYRLARRTCGFAARNFLANGISCILDDAVFPDRPVVGLGGWKRHVGPGLLPVVLLPGLEIVLERNAERSGNRRLTDDEVARIHGRMAGWYGSGLPIIDNSQLDIPQTAQVLNDVLSRSIASPPQW
>NZ_CP015098.1|WP_062925760.1|1703371_1704463_-|3-dehydroquinate-synthase
MSEAVTRIQVGGTAGTDPYEVLVGRQLLGELGGLIGEKAQRVAIVHPEALAETGDALRADLAEQGYEVVAVQVPNAEEAKTAEVAAYCWKALGQSGFTRTDVIVGVGGGATTDLAGFVAATWLRGVRWIAIPTTVLAMVDAAVGGKTGINTAEGKNLVGAFHPPAGVLCDLAALDSLPVNDYVSGLAEVIKAGFIADPVILDLIESDTEAARTPAGPHTAELIERSIRVKADVVSSDLKESGLREILNYGHTLGHAIEKNERYKWRHGAAVSVGMHFAAELGRLAGRLDDATADRHRTILEAVGLPLHYRYDQWPKLLETMKVDKKSRGNLLRFIVLDGLAKPTVLEGPDPAVLLAAYGEVGQ
>NZ_CP015098.1|WP_062925761.1|1704459_1704975_-|shikimate-kinase
MSGPLVVLVGPMGVGKSTVGQLLAERLGVSYRDTDDDIVAARGRTIAEIFVDEGESAFRAIEKQAVHRALAEHDGILALGGGAILDAGTRALLAGQRVAYLSMDVEEAVKRTGLGVARPLLAVNPRKQWRELMEARRHLYEEVATAVVATDGRTPEEVTEAALDALELKEA
>NZ_CP015098.1|WP_062925762.1|1704971_1706156_-|chorismate-synthase
MSRLRWLTAGESHGPALVATLEGLPAGVPITTDMVADHLARRRLGYGRGARMKFERDEVTFLGGVRHGLTLGSPVAVMVGNTEWPKWEQVMAADPVDPEILDGLARNAPLTRPRPGHADLAGMQKYGFDEARPILERASARETAARVALGAVARSYLKETTGVEIVSHVVELAAAKAPRGVYPTPADVEKLDADPVRCLDADASKAMVAEIDQAHKDGDTLGGVVEILAYGVPVGLGSHVHWDRKLDARLAGALMGIQAIKGVEIGDGFELARVPGSKAHDEIVKTDDGIRRTTGRSGGTEGGLTTGELLRVRAAMKPIATVPRALQTVDVTTGEAAQAHHQRSDVSAVPAAGIVAEAMVALVLADAVAEKFGGDSVTETRRNVTSYLDNLAIR
>NZ_CP015098.1|WP_062925763.1|1706297_1706663_-|hypothetical-protein
MSAGLSQASVKSQIFESLLGFLPDWVQITVLALIVLAVVASWGVKIKRKIARRRAVRTGQPVHAAAQYGQGRGADYLGQYAPQQTQPPQQAQPAQQPSGADFLGAYAPQRQAEGPSANASA
>NZ_CP015098.1|WP_062925764.1|1706714_1707554_-|shikimate-dehydrogenase
MPARATDARRAGVLGSPIAHSLSPVLHRTAYQELGLEGWTYDRFEVDEAGLPAFFETLGAEWAGLSLTMPLKRAVIPLLDEISETAASVDAVNTVVRTEDGRRIGDNTDIPGMVAALREHGIDEVDSAAVLGAGATASSALAALSRICPGEIAVYVRSEARAAEMRQWAERLDVSVRIADWADAEQALRAPLVISTTPAGVTDALARSVPERPAALFDVLYDPWPTDLAARWSAYGGAVVSGLDLLVHQAVLQVEQMTGLAPAPLDAMRKAGERALADR
>NZ_CP015098.1|WP_062925765.1|1707534_1709310_-|endolytic-transglycosylase-MltG
MTEYGRGPGSEPWHPEDPLYGDGGWGGQQAHQGQQSPYGGQPQHYPEQPQQPQYGDWGTGDQAGYGQAQQQYPYDQQYAAQAHGHQQYPGQQDPGHQQSQGYHQQQDGHQQAQGYHPQQYDNSGWVNDPHQQVSYPGDPGDPYGQQQAGSYGGGQQDYYGTPDAYPPPEPPGRRGVEPAQEPAQEPATDWDPGPDQGEHAFFAGGDDDDDGDEPGERRGREDKRGRGGGKPKKRRNGMACLLVVAILGGGLVGVSYFGYQFYQDRFGDAPDYAGGGNGQQVTVEIPEGALGYKIGQVLKSAGVVKSVDAFVAAQQSNPEGKSIQDGVYTLQKQMSAESAVELMLSPKSRDNLIIAEGKRNADIYRLIDKRLGVKGGTTAKVAEKDYKKLGLPAWALNHPDVKDPLEGFLYPSSYGVSKGQKPEAVLKQMVARAAATYKKAGVEKKAESLGLENPWQLITVASLVQAEGKTHDDFRKMAEVVYNRLKPTNTETNQLLQFDSSFNYLKNESNIHISESEINSNKDPYNTYTNKGLPPGPIDNPGDVALQAALNPTKDGWIYFVATDGVSKTEFAKTHAQFLKLKDKFDASSGN
>NZ_CP015098.1|WP_033309656.1|1709431_1709896_-|Holliday-junction-resolvase-RuvX
MRRGRRLAIDVGDARIGVASCDPDGILATPVETVPGRDIPAAQRRLKQLVEEYEPLEVVVGLPRSLKGGEGPAAVKVRGFTQELARMISPIPVRLVDERMTTVTASQGLRASGVKSKKGRSVIDQAAAVVILQQALESERVSGKAPGEGVEVVI
>NZ_CP015098.1|WP_062925766.1|1709914_1712587_-|alanine--tRNA-ligase
MESAEIRRRWLSFFEERGHTVVPSASLIADDPTLLLVPAGMVPFKPYFLGEVKPPFDRATSVQKCVRTPDIEEVGKTTRHGTFFQMCGNFSFGDYFKEGAIKLAWELLTSAQDKGGYGLDPERLWITVYKDDDEAERIWHDVVGVPKERIQRLGMKDNYWSMGVPGPCGPCSEINYDRGPEFGAEGGPAVNDERYVEIWNLVFMQYERGEGIGKDNFEILGDLPSKNIDTGLGLERLAMILQGVQNMYEIDTSMAVINKATELTGVRYGDAHGSDVSLRVVTDHMRTSVMLIGDGVTPGNEGRGYVLRRIMRRAIRNMRLLGATGPVVKDLIDTVIEMMGQQYPELITDRERIEKVALAEENAFLKTLKAGTNILDTAVTDTKASGGTVLPGDKAFLLHDTWGFPIDLTLEMAAEQGLSVDEDGFRRLMKEQRERAKADAQAKKTGHAGAGAYREIADQAGATDFIGYTDTESESTIVGILVDGASSPAATEGDEVEIVLDRTPFYAEGGGQIGDTGKIKVDSGAVIEIRDCQKPVPGVYVHKGVVQVGEVTVGAKAHASIDDRRRKAIARAHSATHLTHQALRDALGPTAAQAGSENQPGRFRFDFGSPSAVPTAVMTDVEQKINEVLARDLDVRADVMGIDEAKKQGAIAEFGEKYGERVRVVTIGDFSKELCGGTHVHNTAQLGLVKLLGESSIGSGVRRIEALVGVDAYNFLAREHTVVAQLQELIKGRPEELPEKVSAMLGKLKDAEKEIEKFRAEKVLQAAGGLAESAKDIRGIAVVTGQVPDGTTADDLRKLVLDVRGRIQGGRAAVVALFTVANGKPLTVIATNEAARERGLKAGDLVRTAAKTLGGGGGGKPDVAQGGGQNPAAIGDAVDAVERLVTETAK
>NZ_CP015098.1|WP_062925767.1|1712586_1712940_-|hypothetical-protein
MFRRTFWFTTGVAAGVWATTKVNRKLKQLTPESLARTAGNKAIEAGHRIKDRAVGFALDVRDNMAAREAELGDALGINENPELPGPRRFAAIENRNNPKYVEGSAYQTYPYNRNEDH

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Crispr_ID: NZ_CP015098_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_2

1957929-1958039

Orphan

Consensus_repeat	Method
ACCCGGCACGACACCCCGGCCAACCCG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP015098_2

>merge|NZ_CP015098|2|1957929-1958039|CRISPRCasFinder
ACCCGGCACGACACCCCGGCCAACCCGCACCGCACCCATCCGACCCAGCACGACACCCCGGCCAACCCGCACCGCACCCATCCGACCCAGCACGACACCCCGGCCAACCCG

>NZ_CP015098|2|2|1957929-1958039|CRISPRCasFinder
ACCCGGCACGACACCCCGGCCAACCCG	CACCGCACCCATCCGACCCAGCACGACACCCCGGCCAACCCGCACCGCACCCATCCG
ACCCAGCACGACACCCCGGCCAACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062925951.1\|1953178_1953643_-\|redox-sensitive-transcriptional-activator-SoxR	unknown	unknown	gnl\|CDD\|131005
NZ_CP015098.1\|WP_062925963.1\|1972208_1972829_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380058
NZ_CP015098.1\|WP_062925957.1\|1959077_1960439_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP015098.1\|WP_062925952.1\|1954231_1954867_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_CP015098.1\|WP_062925955.1\|1957158_1957869_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP015098.1\|WP_062925961.1\|1968268_1969711_-\|citrate:proton-symporter	unknown	unknown	gnl\|CDD\|225407
NZ_CP015098.1\|WP_062925959.1\|1961733_1963122_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143456
NZ_CP015098.1\|WP_033311842.1\|1953752_1954214_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
NZ_CP015098.1\|WP_107308476.1\|1964748_1965729_-\|class-F-sortase	unknown	unknown	gnl\|CDD\|320678
NZ_CP015098.1\|WP_062931367.1\|1955243_1956395_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173847
NZ_CP015098.1\|WP_062925950.1\|1951776_1952379_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062925953.1\|1954937_1955183_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377503
NZ_CP015098.1\|WP_062925954.1\|1956470_1957112_+\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|367243
NZ_CP015098.1\|WP_079128908.1\|1966288_1966882_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062925962.1\|1969846_1972114_-\|molybdopterin-oxidoreductase-family-protein	unknown	unknown	gnl\|CDD\|239163
NZ_CP015098.1\|WP_062925960.1\|1963243_1964578_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226359
NZ_CP015098.1\|WP_062925958.1\|1960631_1961714_-\|Zn-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176240
NZ_CP015098.1\|WP_062925949.1\|1948706_1951505_-\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|376618
NZ_CP015098.1\|WP_062925956.1\|1958126_1959089_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP015098.1\|WP_062931366.1\|1952454_1953219_+\|3-keto-5-aminohexanoate-cleavage-protein	unknown	unknown	gnl\|CDD\|225785

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062925951.1\|1953178_1953643_-\|redox-sensitive-transcriptional-activator-SoxR	gnl\|CDD\|131005	TIGR01950, HTH-type_transcriptional_activator_SoxR_homolog, redox-sensitive transcriptional activator SoxR. SoxR is a MerR-family homodimeric transcription factor with a 2Fe-2S cluster in each monomer. The motif CIGCGCxxxxxC is conserved. Oxidation of the iron-sulfur cluster activates SoxR. The physiological role in E. coli is response to oxidative stress. It is activated by superoxide, singlet oxygen, nitric oxide (NO), and hydrogen peroxide. In E. coli, SoxR increases expression of transcription factor SoxS; different downstream targets may exist in other species. [Cellular processes, Detoxification, Regulatory functions, DNA interactions].	2.40225e-79
NZ_CP015098.1\|WP_062925963.1\|1972208_1972829_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|380058	pfam17928, TetR_C_22, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present the TetR Transcriptional Repressor present in sco1712 proteins from Streptomyces coelicolo which act as a regulator of antibiotic production.	1.37081e-18
NZ_CP015098.1\|WP_062925957.1\|1959077_1960439_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.37067e-149
NZ_CP015098.1\|WP_062925952.1\|1954231_1954867_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	7.85908e-35
NZ_CP015098.1\|WP_062925955.1\|1957158_1957869_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.28766e-13
NZ_CP015098.1\|WP_062925961.1\|1968268_1969711_-\|citrate:proton-symporter	gnl\|CDD\|225407	COG2851, CitM, H+/citrate symporter [Energy production and conversion].	2.29927e-170
NZ_CP015098.1\|WP_062925959.1\|1961733_1963122_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143456	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.	0
NZ_CP015098.1\|WP_033311842.1\|1953752_1954214_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	2.38411e-90
NZ_CP015098.1\|WP_107308476.1\|1964748_1965729_-\|class-F-sortase	gnl\|CDD\|320678	cd05829, Sortase_F, Sortase domain found in the class F family of sortases. Class F sortases are mainly present in Actinobacteria, Chlorobacteria and Firmicutes. Their functions are largely unknown.	7.41124e-46
NZ_CP015098.1\|WP_062931367.1\|1955243_1956395_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	4.44905e-164
NZ_CP015098.1\|WP_062925953.1\|1954937_1955183_-\|hypothetical-protein	gnl\|CDD\|377503	pfam05360, YiaAB, yiaA/B two helix domain. This domain consists of two transmembrane helices and a conserved linking section.	8.90863e-16
NZ_CP015098.1\|WP_062925954.1\|1956470_1957112_+\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	gnl\|CDD\|367243	pfam02909, TetR_C, Tetracyclin repressor, C-terminal all-alpha domain.	6.54577e-15
NZ_CP015098.1\|WP_062925962.1\|1969846_1972114_-\|molybdopterin-oxidoreductase-family-protein	gnl\|CDD\|239163	cd02762, MopB_1, The MopB_1 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP015098.1\|WP_062925960.1\|1963243_1964578_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	9.94912e-129
NZ_CP015098.1\|WP_062925958.1\|1960631_1961714_-\|Zn-dependent-alcohol-dehydrogenase	gnl\|CDD\|176240	cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.	1.53288e-159
NZ_CP015098.1\|WP_062925949.1\|1948706_1951505_-\|penicillin-acylase-family-protein	gnl\|CDD\|376618	pfam01804, Penicil_amidase, Penicillin amidase. Penicillin amidase or penicillin acylase EC:3.5.1.11 catalyzes the hydrolysis of benzylpenicillin to phenylacetic acid and 6-aminopenicillanic acid (6-APA) a key intermediate in the the synthesis of penicillins. Also in the family is cephalosporin acylase and aculeacin A acylase which are involved in the synthesis of related peptide antibiotics.	2.77809e-74
NZ_CP015098.1\|WP_062925956.1\|1958126_1959089_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	2.63562e-20
NZ_CP015098.1\|WP_062931366.1\|1952454_1953219_+\|3-keto-5-aminohexanoate-cleavage-protein	gnl\|CDD\|225785	COG3246, COG3246, Uncharacterized conserved protein [Function unknown].	3.54429e-28

>NZ_CP015098.1|WP_062925955.1|1957158_1957869_+|winged-helix-turn-helix-transcriptional-regulator
MTTRDPRATALARFAALFADETRAACLLALLDGRAWTAGELARHAGVAASTLSEHLGRLVTGGLLTEDRQGRHRYVRLADARIAQLVEDLASQVPPGTAVRPRNLRESNAGSAMARGRTCYDHLAGRLGIAVTDALTARGLLQQETGFALTDAGTAWFVSAGIALDRQSRRPLARACLDWTERRPHLAGVAGAALCRHALDTGWCVRIGSERAVKVTAAGERALWDLLGVEAMALR
>NZ_CP015098.1|WP_062925954.1|1956470_1957112_+|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein
MARPRKPLLSTDRIVEAARALVDAEGLAAVSTRRLAAELGVSGPSLYNHFRTKDEILEAVADSVSGQVDLSMFQDGRDWRTALHDWAVSYRAALRDHPNIVPVLARGPGRRPAGLRLADAVYGAMVAAGWPPAQATSIGALMRYFVMGSALGSFAGGFVDDASAYDPADYPHLQQAHLLAEQQEKIDERAFETGLTALLDGLARQYEQVRRTA
>NZ_CP015098.1|WP_062931367.1|1955243_1956395_-|acyl-CoA-dehydrogenase-family-protein
MNLELSEEQSAVRQLARDFVEREITPHVIAWDRAEEVDRAIVKKLGEVGFLGLTIDEEYGGSGGDHLAYCLVTEELGRGDSSVRGIVSVSLGLVAKTVAAWGSEEQKRRWLPGLTSGASIGCFGLTEPGTGSDAGNLVTRAVRDGDDYVLNGTKTFITNGTWADVVLLFARSTDAPGHKGVSAFLVPAETPGLTRRTIHGKLGLRGQATAELALEDVRVPASALLGEEGKGFSIAMSALAKGRMSVAAGCVGIAQAALDAAVRYAGEREQFGRTIAHHQLVQELLSDIALDVDAARLLTWRVADLIDRGQPFAVESSKAKLFASEAAVRAANNALQVFGGYGYIDEYPAGKLLRDARVMTLYEGTSQIQKLVIGRALTGVSAF
>NZ_CP015098.1|WP_062925953.1|1954937_1955183_-|hypothetical-protein
MSDTPGKQQNTAAFYGQAVASFAVAMAATAIGIYQLSADAWVRAFLAIAVLYLVTSSFTLAKVIRDRQDGAAPSYAPFEKR
>NZ_CP015098.1|WP_062925952.1|1954231_1954867_-|TetR-family-transcriptional-regulator
MSTAEDTAGGEAQAWGEVTPDAARRLLIAAVEAFAERGYHATTTRDIAGRAGMSPAALYIHYKTKEELLHRISRIGHEKALEILRTASRREGSATERLADAVSSFVRWHAGGRTTARVVQYELESLGPDARAEILALRRQVDGEVRGIIEEGARSGEFEVIDVHGTTLAVLSLCIDVARWFNVDGPRTPEQVGELYAELVLRMVGAQGPAV
>NZ_CP015098.1|WP_033311842.1|1953752_1954214_+|MaoC-family-dehydratase
MAEPRIFTSVDDLKSAVGEQLGYTDWLDIDQKRIDLFAEATGDHQWIHVDPEKAAAGPFGTTIAHGYLTLSLLPLFGPQLIAVEGVKMGVNYGTNKVRFPAPVPVGSRLRATAAISAVEEVPGGVQVAVAFSVEREGGDKPVCVAESVARYYL
>NZ_CP015098.1|WP_062925951.1|1953178_1953643_-|redox-sensitive-transcriptional-activator-SoxR
MPQIPEKIHELTVGQLAARSGAAVSALHFYESKGLISSRRTAGNQRRYSRDTLRRVAFIRAAQRVGIPLATIRDALAELPEERTPTREDWAHLSEVWRTELEERINQLNRLRDHLTDCIGCGCLSLDNCVLSNPDDVFGERLTGSRLMVDRGGR
>NZ_CP015098.1|WP_062931366.1|1952454_1953219_+|3-keto-5-aminohexanoate-cleavage-protein
MMQVCLNGSRTAADGVAVPLTPESMAGSAAGAVAAGARDLHVHPKTPCGQDTLSPRVLAVTLSAIRARVPVPVGVTTGAWAEPDPAARLERIRAWTVLPDHASVNWHEPGAEETAALLMERGVGVEAGIWSGTDGAERFAASPLGPKVLRVLAEVTDTDPQGAVSSAHALLSGIGTAHGRPVLLHGEDGGAWPVLRLAGRLGLATRIGLEDVLVLPGGEPARSNGELVAAGLAEYETARSGVTDRPGRPSGASP
>NZ_CP015098.1|WP_062925950.1|1951776_1952379_+|hypothetical-protein
MAGFRSLARQVRDPRCDLALRRYSLRKCLERFAPYGHRATWDHLCSRAGFGPEDRSPDPVRLVAALDELEEARAVWLAYEVEFAERRKKEKHDGLRRPGSVDDWHRMTWGGFGVAWCDDPAVHPREPLAEVLRRLIAALEREPGSACPVCGGEQLMWRYDLDHEPSSGPVCTDCGILVPRPVLTPESLAYARRARLLVSA
>NZ_CP015098.1|WP_062925949.1|1948706_1951505_-|penicillin-acylase-family-protein
MPRRAPRTVLDRMRTPSGIPGFLKTASVCALIAGLLSPLAPAAASETATAQATAAANDHCGNQCSDILPPGQNGNATLAQILLNQAFGTQPEHAEDQLGPYANLAKGYPGLTNDKINTFFNDASFGVPADQVASSLKPAGRGDVTIVRDKKTGVPHITGTTRYGTEFGAGYAAAQDRLWLMDVFRHVGRGQLTSFAGGAPSNQGLEQQFWRHAPYTEADLQAQIDNAVATNGERGKQALADVKAYLDGINAYIDASDKGRTFPGEYVLTGHKDSVTNAGTIEHFKITDLVALASVIGALFGSGGGGEVNNALSLMAAQDKYGVAEGTKVWESFRMRNDPEAVLTQHAGSFPYGTKPADPQGTALPDAGSVKPEPLVYDRTGSATTASATGASGEAAKTATSSAKRGMSNALVVSGKHTASGHPVAVFGPQTGYFAPQLLLLQEIQGPGISARGASFAGLSMYVELGRGQDYAWSATTSGQDIIDSYAVELCQDDYHYLYRGTCTPMEKIEQKNTWKPTVADGTAAGSYTMRVWRTKYGPVEYRATVGGKKVAYTTLRSSFLHEADSIIGFQMLNDPDYVKGPDTFQKAVQHINYTFNWFYADSEHTAYYNSGDNPVRAAGVDAEFPAWARPAYEWRGWDPATNTADYTPPSAHPNSVDQDYYVSWNNKQARDYTTAPWGNGSVHRGNLLEDRVKKLVQQGGVTRAALVKAMADAGLTDLRAEDVLPKLLKVVNSSPVTDPAVAAAVSRLQAWAAAGGKRTETAAGSKKYADADAIRILDAWWPLLVKAEFEPGLGSGLYEAMTANLPVDESPSAAHGPTGSHAGSSFQYGWWSYVDKDVRAVLGEQVKGPLARTYCGDGSLAACRDTLVSTLKAAAGKTAAQVYPGDDVCPAGDQWCADSINHRTLGGIKHGKIGWQNRPTYQQVVEFTSHR
>NZ_CP015098.1|WP_062925956.1|1958126_1959089_+|DMT-family-transporter
MSNNSPSRPGRRAELLAAGAAAVTVVLWASAFVSIRSAGDAYSPGALALGRLLAGALTLGVICLLRREGVPPRSAWRGIAISGVLWFGFYMVALNWGEQQVDAGTAALVVNTGPILIALLGARLLGDPMPPRLLAGMAVSFAGAVTVGLSMSGEGGSSVLGVVLCLLAAIAYAGGVVAQKPALGSASPLQVTTFGCLVGAVLCLPFAGQLVQEAGDAPASATLNMLYLGVFPTALAFTTWAYALSRTTASRMGATTYAAPALVVLMSWLFLGEVPGLLTLVGGVLCLAGVAVSRSRAAARNAAPGAVPEPRSEQAGDSAR
>NZ_CP015098.1|WP_062925957.1|1959077_1960439_-|MHS-family-MFS-transporter
MDTAPSAQPATTTPAVGNRRRVATAAALASAVEWYDYFVFGIAAALVLGDLYFPAGSTTAGVLASFATFAVGFLARPIGGIVAGHLGDKRGRKPMLVLALTLMGVATTGIGLLPTYETIGVAAPILLVLLRVAQGVAVGAQWGGAMLLATEYAPEGKRGVYGSVVQLGVPIGVVTANTVFLLAGALTTDSAFASWGWRVPFLVGLLVLGLAWYIHTRVEETPAFREAERALAEKEKSEQNSPLRTILRGHLGTVFLAGGSFAVNTATFYILITGVLDYTTRELDMKKSAVLTVSLCVSLTQLVLIPASAALSDRVGRIRIYALGAVGIALWAVPLFLLIDTGSLLWLAVGTFVASCFLSIMYGPQAALFAELFTPEMRYTGASLGYQIAAVAGGGLAPFMMVLLLEATGTSMAVSGYIIVLSVIALMSIKILADRARAAEAQTGPETKAGSTS
>NZ_CP015098.1|WP_062925958.1|1960631_1961714_-|Zn-dependent-alcohol-dehydrogenase
MAVRAAVLPAIGSPLEITGIDLPDPGPGQVRVRLAAAGVCHSDLSLSDGTMRVPVPAVLGHEGAGTVVSVGEGVDHVSPGDGVVLNWAPSCGACHACSLGEVWLCANALSGAADVYARTTDGTDLHPGLNVAAFAEETVVYASCVLPVPDGVPLTDAALLGCAVLTGYGAVHHSARVRRGETVAVFGVGGVGLAALQAARIAGASKIVAVDVSAEKEELAKAAGATDYVVASDTTAREIRGLTGKQGVDVAVECAGRAVTIRTAWDSTRRGGRTTVVGIGGKDQQVTFNALEIFHWGRTLSGCVYGNSDPARDLPVLAEHIRAGRLDLSALVTEHISLDGIPAAFENMLAGKGGRALVVF
>NZ_CP015098.1|WP_062925959.1|1961733_1963122_-|aldehyde-dehydrogenase-family-protein
MKAYDGMYIEGAWRPAAGQDVIEVVNPVDEQVIGTVPAGTAEDVDAAVRAARAALPDWAATPPAERAARLAALRDVLVTRADEIAETVTAELGSPLKFSQAVHAGVPIAVAGSYAELAAAYAFEEKTGNSVVHHEPIGVVAAITPWNYPLHQIVAKVAPALAAGCTVVVKPAEDTPLVARLFADAVHEAGLPAGVFNLVTGLGPVAGQALAEHPGVDLVSFTGSTAVGRQIAAVAAGQVKKVALELGGKSANVILPSADLAKAVNVGVANVMSNSGQTCSAWTRMLVHRDRYDEAVELAAAAAAKYGDRIGPVVNAKQQDRVRGYIEKGVAEGARLVAGGPEAPREQGYFVSPTVFADVTEDMTIAQEEIFGPVLSILKYEDEDDALRIANGTVYGLAGAVWAGDEAEAVAFARRMETGQVDINGGRFNPLAPFGGYKQSGVGRELGVHGLAEYLQTKSLQF
>NZ_CP015098.1|WP_062925960.1|1963243_1964578_-|ABC-transporter-ATP-binding-protein
MTRAISLHDVSKAYPRGPRVVDRLSLDISPGEFLVLLGPSGCGKSTVLRMIAGLEEIDEGQLLLDGEYANDLPPSGRDMAMVFQNFALYPNMTSRANIGFPLRIEAPGTDPRPRVDATARMLGIEDLLDRLPGQLSGGERQRVAMGRAIARHPSAFLMDEPLSNLDAKLRTHLRAEISRLTRELGVTTIYVTHDQAEAMSLGDRVAVLRGGVLQQVDSPRAVYALPRNVFVAAFIGTPRINLVRGLVRAPLDGAMTISLGKQFLRLPEPLSLDHQLLRVQQGREVIVGLRSEAVRIAKHSAARPGEVPITGLVEHVEFQGHEILVHFSTGSSPAVVPDLEAPRPRPGRPARRRRRDGSVLTRLRERSGAGRAGPVIALDHPEAAAPATADARLPGDLIVRTTPDLALRHGMQVPLLVDLAHLFVFDQHGDRICPHPDRLPDLGE
>NZ_CP015098.1|WP_107308476.1|1964748_1965729_-|class-F-sortase
MLLVAGVCWDRGEEPGSTVTALPPDLTTAAHPAGSGTGTAALPPSPGPRATASPGASGARTGTAARTAASTAPSPRTGPPRTAASAATPRAPGPATDAPPAPRPVPNGARTQGPRVAPHPPIPSSPPPGARKGNPAAPHSRPAVATPRPAPPRPAARVPAPAARKPHSPPGPRPLPRSRATRLLIPYLRVDAPVMGLGLDRDRRLTAPPDDDPRLVGWYQHGASPGEQGTAVAVGHLDTDSGPAVFAGLTELKRGRIVKARRVDGRIAVYTVDKIKSYEKAHFPSQEVYGARGRPELRLITCGGSYDRRKGYSGNVVVFAHLTGIR
>NZ_CP015098.1|WP_079128908.1|1966288_1966882_-|hypothetical-protein
MFMPVVPLARRAGTRTAVVAALTLAGTTLSGVSAVAAPIPGDNGDVKIHASTTAAANQRNDPKVCDFYLAAFNFDAGEKVNWTIQTQPEVPGGATRTGSFTADATGAGRTAAVDLPNGQYKLTWLTDQAHGAGKFKVFKVDCPTSKPTTPVGGPPAGGGGIARGEAFTPVTGAAAVGLAAVAGTVWFRLRRRPDGAA
>NZ_CP015098.1|WP_062925961.1|1968268_1969711_-|citrate:proton-symporter
MLTILGFAMIATFLVLIMMKKMSPIAALVLIPALFCVFVGKGAELGDYVLDGVTDLAPTAAMLMFAIVYFGVMIDVGLFDPIVRGILKFCKADPMRIVVGTALLAAIVSLDGDGSTTFMITVSAMYPLYKRLKMSLVVMTGVAAMANGVMNTLPWGGPTARAATALKLDASDIFVPMIPALLVGLAFVFVLSYVLGVRERRRLGVLTLDEVLEEEKETETVLVGSGGSGDGKVSMRKGGTGGAGSGTDAPESATGSAGSADSGDGDGFQGLDPNRPTLRPKLYWFNALLTVGLLTAMIMEWLPIPVLFLIGAALVLSVNFPHIPDQRARLAAHADNVLNVSGMVFAAAVFTGVLQGTGMVDHMAKWMVDVIPASMGPHMALVTGILSLPLTYFMSNDGFYFGVLPVLAEAGAAHGVTPLEMARASLVGQPLHMSSPLVPAVYVLVGMAKVEFGDHTRFVVKWAALTCLVILGAGMLFGII
>NZ_CP015098.1|WP_062925962.1|1969846_1972114_-|molybdopterin-oxidoreductase-family-protein
MSRTALRICPLCEATCGLTLTIEGTRVTHARGDRDDVFSQGFICPKGASFGAVDSDPDRLRTPLVRRDGELREATWEEAFDAVAAGIRPVLERHGPNSVGVVLGNPNVHTMAGALYPPVLLAGLGTRSVFTASTVDQMPKHVSSGLLFGDANAIPVPDLDRTGHLLLIGANPLESNGSLCTAPDFPGKLKALKARGGTLVVIDPRRTRTAKLADRHIAVRPGTDALLLAAMAQVLFEERLVEPAPHVQGVEELSDAIREFTPEAVAEACDVEADAIRALARDLAAAPAAAVYGRIGSCTVPHGTLASWLVDVLNILTGNLDRPGGALFPQAATDKTPRPAGPGRGFALGRWHSRVSRHPEAKGELPLSALAEEIDTATEEGEPVRALIAVAANPVLSAPDGDRLDKALASLDFMVSVDPYLNETSRHADVVLPPPPPSQSPHHDFAFNTLAVRNQVRYTRPAVPLEPGRMAETEILARLILAVTGMHGTDPAAVDRMVIDQTLGKAVTEPHSPVHGGDPRELAARLSGDTGPERRLDMMLRLGPYGDGFGVRPDGLSLDKLLAHPHGIDLGPLEPRLPQPLKTRSGRVELLPGPIADDLPRLRAALAERPEGLVLVGRRHLRSNNSWMHNVPALTGGSNRCTLHIHPEDAERLGIEDGAAVRVKGAGGEVTAPAEVTDAIRRGVVSLPHGWGHNRPGTRLSHASTDPGVNVNQLLDGRLLDPLSGNAVLNGVPVEVAPETDPEASAVTEKLTALT
>NZ_CP015098.1|WP_062925963.1|1972208_1972829_-|TetR-family-transcriptional-regulator
MKPVPHATSLRRAPVQRRSAERLTRILDACADLLDEVGYDALSTRAVAQRAAVPIGSVYRFFGNKRQMADALAQRNLERYSERVTQRLRQAGEDGGWRTAMDAVLDEYLEMKRTAPGFSLVDFGNQIPVGARHTEPNHRVADRLTELLSGYLDREPDEDLRRVFLVAVETADTLVHLAFRVAPEGDERVIAEAREMLRAYLARALD

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Crispr_ID: NZ_CP015098_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_3

2090713-2090826

Orphan

Consensus_repeat	Method
GGGGGCCGGTGCAGGGCGACCGCGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_3

>merge|NZ_CP015098|3|2090713-2090826|CRISPRCasFinder
GGGGGCCGGTGCAGGGCGACCGCGCGAGGGCGCCGATGGCGGGCAGGGACCGGGGCGGTACGACGAGGGCGGCGGACGGGGCTGGCCGGGGGCCGGTGCAGGGCGACCGGGCGA

>NZ_CP015098|3|3|2090713-2090826|CRISPRCasFinder
GGGGGCCGGTGCAGGGCGACCGCGCGA	GGGCGCCGATGGCGGGCAGGGACCGGGGCGGTACGACGAGGGCGGCGGACGGGGCTGGCC
GGGGGCCGGTGCAGGGCGACCGGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062926044.1\|2078125_2078557_-\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501
NZ_CP015098.1\|WP_062926058.1\|2097802_2098522_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|273824
NZ_CP015098.1\|WP_062926059.1\|2098792_2100349_+\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_CP015098.1\|WP_062926057.1\|2097029_2097797_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|236124
NZ_CP015098.1\|WP_062926055.1\|2095809_2096502_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP015098.1\|WP_062931376.1\|2093834_2094041_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_030852293.1\|2080595_2080838_-\|chaplin	unknown	unknown	gnl\|CDD\|367652
NZ_CP015098.1\|WP_062926048.1\|2083308_2084007_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP015098.1\|WP_062926052.1\|2091928_2093155_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP015098.1\|WP_062926053.1\|2093250_2093769_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224973
NZ_CP015098.1\|WP_062926050.1\|2085390_2086119_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381605
NZ_CP015098.1\|WP_033310988.1\|2078652_2079450_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP015098.1\|WP_062926046.1\|2080994_2081636_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP015098.1\|WP_062926047.1\|2081628_2082774_-\|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP015098.1\|WP_062926049.1\|2084003_2085047_+\|S-adenosylmethionine:tRNA-ribosyltransferase-isomerase	unknown	unknown	gnl\|CDD\|223879
NZ_CP015098.1\|WP_062926060.1\|2100345_2101740_+\|peptidase	unknown	unknown	gnl\|CDD\|223389
NZ_CP015098.1\|WP_174569411.1\|2086209_2088735_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP015098.1\|WP_062926054.1\|2094389_2095739_-\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|129974
NZ_CP015098.1\|WP_062926056.1\|2096517_2096868_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062926045.1\|2079662_2080397_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062926044.1\|2078125_2078557_-\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	3.89758e-15
NZ_CP015098.1\|WP_062926058.1\|2097802_2098522_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|273824	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.71849e-127
NZ_CP015098.1\|WP_062926048.1\|2083308_2084007_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	4.20214e-43
NZ_CP015098.1\|WP_062926059.1\|2098792_2100349_+\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	4.13814e-100
NZ_CP015098.1\|WP_062926055.1\|2095809_2096502_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	9.16598e-49
NZ_CP015098.1\|WP_062926057.1\|2097029_2097797_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|236124	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI.	3.34723e-174
NZ_CP015098.1\|WP_030852293.1\|2080595_2080838_-\|chaplin	gnl\|CDD\|367652	pfam03777, DUF320, Small secreted domain (DUF320). Small domain found in a family of secreted streptomyces proteins. It occurs singly or as a pair. Many of the domains have two cysteines that may form a disulphide bridge.	1.57876e-16
NZ_CP015098.1\|WP_062926046.1\|2080994_2081636_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.47671e-81
NZ_CP015098.1\|WP_062926052.1\|2091928_2093155_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.97743e-93
NZ_CP015098.1\|WP_062926050.1\|2085390_2086119_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381605	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	3.5508e-31
NZ_CP015098.1\|WP_033310988.1\|2078652_2079450_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	9.04555e-94
NZ_CP015098.1\|WP_062926053.1\|2093250_2093769_-\|histidine-phosphatase-family-protein	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	7.89715e-40
NZ_CP015098.1\|WP_062926047.1\|2081628_2082774_-\|GAF-domain-containing-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	9.75506e-58
NZ_CP015098.1\|WP_062926049.1\|2084003_2085047_+\|S-adenosylmethionine:tRNA-ribosyltransferase-isomerase	gnl\|CDD\|223879	COG0809, QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) [Translation, ribosomal structure and biogenesis].	4.84072e-66
NZ_CP015098.1\|WP_062926060.1\|2100345_2101740_+\|peptidase	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	1.63965e-32
NZ_CP015098.1\|WP_174569411.1\|2086209_2088735_-\|FHA-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.91198e-74
NZ_CP015098.1\|WP_062926054.1\|2094389_2095739_-\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|129974	TIGR00896, Inner_membrane_transport_protein_YeaN, cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. [Transport and binding proteins, Other].	3.07662e-124

>NZ_CP015098.1|WP_174569411.1|2086209_2088735_-|FHA-domain-containing-protein
MPELVLESNGRTWTLDPSRAYTLGRDPQGDVVFDDARVSWRHATVSFNGRSWVIEDHGSTNGTFVQGQRIHQMELGPGSAVNLGNATDGPRLSLSGAAASVATPQAQPQQQPYAAQGANPAWGQQAPAQQPPQQQAPQAGWQQPQQAAAHIPQQQGPGGVAGAPPVYGDRSPTTFHQFSLGRVMRIGRALENELVVSDLQVSRHHAEFHSTPDGRMEIRDLGSHNGTYVNGQPIAKGGTQLLGPTDVVGVGHSTFRIVGDRLEEFVDTGEVSFSARHLTVTVDGGKQILKDVSFGVPEKSLIAVIGPSGSGKSTLLKALTGYRPANQGEVLYDNRNLYKQFAELRQRIGLVPQDDILHKELTVKKALKYAAKLRFPADTTGAEREARIDEVLRELKLDIHKDKKVTSLSGGQRKRVSVALELLTKPSLIFLDEPTSGLDPGMDRDVMQLLRGLADDGRTVLVVTHSVAELAICDKLLVMAPGGAVAYFGPPEEALNFFGYDTWADVFSAFENYRDYDWAGRWKGSQHYQMYAADIDAVAPQSVQVPQMQAMKPPKPQGWMSQFVTLVRRYVSVIVSDKGFLALMVILPAVLGAVSLLIDADKGLLPNPANPQTGRIIPNGTATTVLLILAVGACFAGAANSVRELIKERVIYERERATGLSRSAYLMSKVFVLGMITVLQGLLVGVIGFSSREIPEEGLVLGSATLVELSIPIMALGFTSMMFGLIISSLVKTAEKTMPLLVMFAIIQVVFTGCLFALHGSIGVNQFSFLMPSRWAVAASGATLDFNKISPPETAGDTDPLWEHTAGAWAMDMGALLVLGVICGFFVARFLRRHEPEVMRK
>NZ_CP015098.1|WP_062926050.1|2085390_2086119_+|transglycosylase-SLT-domain-containing-protein
MPKNIFSRVQSRSLTRHHKIAMAGVATLGAAAIGFSAVPSGASTKTTTEAAQPAAVAYSNQQIKDVKASVTDQMAGASLKAEQIAAKKKADAAAAAKKKAAAEAAKKKAEAAREAKEAASRAAKRAEAKKAAKKTYPNNLDGWIRESLDVMKKHGIPGSYDGIKRNIIRESSGNPKAINNWDINAINGIPSKGLLQVIPPTFKHWHVPGTSWDIYDPVANITAACNYAADKYGSMDNVDSAY
>NZ_CP015098.1|WP_062926049.1|2084003_2085047_+|S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
MTSAVRVPAELSARVPVEQRGPGLERDAVRMLVSRGAEVAHHTFTELPLLLRAGDLLVVNTSATLAAAVDGWSGHARVVVHFSTRGDDGRWAVELREPDGRGTTRARTGGPPGSEVCLPGGGRLVLEEPLSGRSERLWWARVSGPEVPGLLREYGRPIRYAYTERDQPLSVYQTVFALPSADGAGSAEMPSAARPFTARLVTELVSRGVQFAPVTLHTGVASAEAHEPPCAERFVVPGASAWLINAAKAGGGRVVAVGTTAVRAVESAVGADGAVRARAGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRVAVGRAYTAALQHRYQWHEFGDVHLVLP
>NZ_CP015098.1|WP_062926048.1|2083308_2084007_+|SDR-family-oxidoreductase
MPVAIITGASKGLGRALAEALAGRGWDLVLDARGAQALADTAEVVSAHGTRVSALLGDVTDAAHRAELVSAARRLGGVDLLVHNASALGAEPLVRLEELSLEGLRRALDVNLVAGLGLVQEALPLLRASREGTVVAVSSDAAAEAYETWGGYGASKAALDHLVAVLAVEEPGLRVWAVDPGDMATDLYAAAVPDDREPRPEPASVVPGFLRLLDGRPASGRYGAPALLGEAR
>NZ_CP015098.1|WP_062926047.1|2081628_2082774_-|GAF-domain-containing-sensor-histidine-kinase
MSHGPRSGLAAVSSALLAMSRHLEVRDVLKTIVASARELLDAQYAALGVPDDHGGFAQFVVDGVSEEQWKAIGPLPRQHGILAAMLREARAERLADVRKDPRFEGWPKAHPDLVDFLGLPIRDGDEVIGALFLANKNCERPEGGCGFTEDDEELLGILAQHAAIALTNARLYERSRELTIAEERSRLAHELHDAVSQKLFSLRLTAQAAARLVDRDPSRAKGELQQVAALAAEAADELRAAVVELRPAALDEDGLVATLRTQIQVLDRAHSARVTFAGHGVKALPASQEEALLRVAQEALHNALRHSGADHVDVTLDRRGGGAVLRITDDGSGFDPQAVRRAGRHLGLVSMRDRASGAGGSLTVESVPGKGTVIEMEVPGG
>NZ_CP015098.1|WP_062926046.1|2080994_2081636_-|response-regulator-transcription-factor
MADAIKVLLVDDHQVVRRGLRTFLEVQDDIEVVGEAADGSEGVDRAEELKPDVILMDVKMPGMDGVDALRRLRELANTARVLIVTSFTEQRTVVPALRAGAAGYVYKDVDPDALAGAIRSVHAGHILLQPEVAGALLAQEESNAGTGRAGSLTEREREVLGLIADGRSNREIARALVLSEKTVKTHVSNILMKLDLADRTQAALWAVRHGVTG
>NZ_CP015098.1|WP_030852293.1|2080595_2080838_-|chaplin
MKNLKKAAAVTMVTGGLLAAGAGMASATSAHADGQAVGSPGVGSGNVVQAPVHVPVNVSGNSVNVVGILNPAFGNLAVNH
>NZ_CP015098.1|WP_062926045.1|2079662_2080397_+|hypothetical-protein
MAGLVSPDDAVLAVVGADAVHRVEGLAGESGQVGLTLALGRLRTLGVTGLRVALPAPGHPLGLSGPPEFNARALEAEEAVVCHGAAYGLVPDVYEAGPEGVQVEVVWHVLPVREAPPADVPSLGEAERELAEALREATEVLSRLDVAGSGPVAEAAVDAYRARAERGREVLAPGYPPRAVRVLELAQRVGTLIAVATESGHGGAVSSSEIAARREALRPVERTARRAQVAAYNSVVEERERGVR
>NZ_CP015098.1|WP_033310988.1|2078652_2079450_-|ABC-transporter-ATP-binding-protein
MSDVLELQDVSVVREGRALVDQVSWSVKEGERWVILGPNGAGKTTLLNLASTYLFPSSGTTAILGETLGRPGTDVFELRPRIGMAGIAMTEKLPKRQTVLETVLTAAYGMTATWHEDYEDIDEQRARAFLDRLGMSEYLDRRFGTLSEGERKRTLIARALMTDPELLLLDEPAAGLDLGGREDLVRRLGRLALDPIAPSMLMVTHHVEEIPPGFTHVLMIRQGKVLAAGPLELELTSRNLSLCFGLPLVVEQSGERWTAQGLPLS
>NZ_CP015098.1|WP_062926044.1|2078125_2078557_-|NfeD-family-protein
MEIDAWLWWLIGAAALGIALVVTAMPELGMLAVGAIAAAVVTGVFGGGAVAQVVVFAVISAAGIAVVRPIANRHRAQRPQFASGVEALKGRRAVVLERVDASGGRIKLAGEVWSARALDTDRVYESGEEVDVVDIEGATAIVM
>NZ_CP015098.1|WP_062926052.1|2091928_2093155_+|phosphoserine-phosphatase-SerB
MSASQTSSSDVPADVPTLLVKIFGKDRPGITAGLFDTLAAYSVDVVDIEQVVTRGRMVLCALVTEPPPGLEGDLRSTVHSWAESMKMQAEIISGLGDNRPRGLGRSLVTVLGHPLTAEATAAIAARITKTGGNIDRIFRLAKYPVTAVEFAVSGVETEPLRTALVTDAARLGIDVAVVAAGLYRRAQRLVVMDVDSTLIQDEVIELFAAHAGCEDKVAEVTAAAMRGELDFEQSLHARVALLEGLDASVVDKVRSEVRLTPGARTLIRTLKRLGYQVGVVSGGFTQVTDDLKERLGLDFAHANTLEIVDGKLTGRVTGEIVDRAGKARLLRRFAAEAGVPLSQTVAIGDGANDLDMLNAAGLGGAFNAKPVVREAAHAAVNFPFLDTVLYLLGVTREEVEAADILDIG
>NZ_CP015098.1|WP_062926053.1|2093250_2093769_-|histidine-phosphatase-family-protein
MSVAEPRRIVLFRHAKADWPQVADHERPLADRGRMDAAEAGRRLTDTGIAFDLALCSTAVRTRETWKLAVQEFPQRPKTVYEERIYEASPGELIALLNETPDDAQNVLMIGHNPGIQGLADVLAGSGEDDARERMTRRGFPAAAFAVLSFGSTWKGLEPGVATLRDYWAPAE
>NZ_CP015098.1|WP_062931376.1|2093834_2094041_-|hypothetical-protein
MSAPTHTRPHPATRAGAAGRLPWWALALPVLAFTALLALILNPSDAHAATGDPAITHLFERVHQLIAR
>NZ_CP015098.1|WP_062926054.1|2094389_2095739_-|CynX/NimT-family-MFS-transporter
MMGLMVSEETRTMTPPTVRSPAAHDAGKPGGASTRAWTMRLLVLGIVLSALNLRPAITSLGALLEEVRDGLGMSGSVAGLLTSVPPLCFAVFGVMAPRLARRFGAGAVVCAGMAAIATGLLVRPYAGGTAGFLAGSALALMGVAVSNVLMPVIVKHWFPDRVGSMTGLYSMALALGTALAAAVTVPLTDTLGGSWQTGLALWSGLAVAAVLPWLPFVRGRVTPPGAGEEAAGSTQTRGPASASVSAEHARGEAPRLRMARSRTAWALAVFFGLQATAAYITMGWMAQIFRDAGVPAGTAGLLLAVTMVMGVPLAFVIPRLATRLPHQGPIVLALGVCGLAGYSGLYLAPAAGAWAWAVLLGVANCAFPLALTMVGMRARTGPGVAQLSAFAQSTGYLISIPGPLLVGVLYQHSGGWGLPIALMSALMVPQMVVGFLAGRDRTVEDEAAR
>NZ_CP015098.1|WP_062926055.1|2095809_2096502_+|FadR-family-transcriptional-regulator
MPLSHPRRSALSEQVIAALRAQITSGEWPVGSRIPTEPELVEQLGVARNTVREAVRALSHNGLLDIRQGSGTYVVATSELAGVMQRRFAEADPRHIAELRSTLESAAARLAAERRTEKDLKQLDALLLRREEAWESGDKEAFVTADATFHLAVVSASHNDVMTAMYADLGEVLRDWLREDVGEKLTPETYMDHGRLLAAIRAGEAETAAAEAARYPFLCRLGGISSPAAH
>NZ_CP015098.1|WP_062926056.1|2096517_2096868_-|hypothetical-protein
MRLSRRTASASLAVALVLTLAYEAVPHARVPADERESADPFGAACRIRVTGSKVTAYCHNPYPETDRVSLHVECARWWDIDTDSSPVEAGPAQTVRLTGRCWKEVGDVWISHRRGS
>NZ_CP015098.1|WP_062926057.1|2097029_2097797_-|enoyl-ACP-reductase-FabI
MSGILEGKRVLITGVLTESSIAFHTAKLAQEQGAEIILTAFPRPTLTERIAKKLPKPTKVIELDVTNDEHLGRLADIVGEELGGLDGVVHSIGFAPQDALGGNFLNTPFESVATAMHVSAYSLKSLTMACLPLMQNGGSVVGLTFDAQFAWPQYDWMGPAKAALEATSRYMARDLGKQNIRCNLVSAGPLGSMAAKSIPGFGELASVWDDRSPLEWDLKDPEPAGRGVVALLSDWFPKTTGEIIHVDGGLHAIGA
>NZ_CP015098.1|WP_062926058.1|2097802_2098522_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPAALTELGCLAVKCDITDTEQVEQAYKEIEEAHGPVEILVANAGITKDQLLMRMSEEDFTSVIDTNLTGTFRVVKRANRGMLRAKKGRVVLISSVVGLYGGPGQANYAASKAALVGFARSLARELGSRNLTFNVVAPGFVDTDMTKALTDEQRENIVKQVPLGRYAQPEEIAATVRFLASDDASYITGAVIPVDGGLGMGH
>NZ_CP015098.1|WP_062926059.1|2098792_2100349_+|TldD/PmbA-family-protein
MPHTIDEAFTALPLRPLADAALARARALGAEHADFRFERVRGASWRFRDAKPAGSSDTTDLGYAVRVVHGGTWGFASGVDLTLDAAARVAGQAVAMAKLSAQVIKAAGSDVGAPPTPFGQWGRVELADEPVHAEKTWISSYEIDPFSVPDEEKAGLIAEWSAQLLAAHGVDHVDASLLTVHENKFYADTAGTVTTQQRVRLHPVFNAVAVDESSGEFDSMRTLAPPVGRGWEYLRGTGWDWEGELERIPELLAEKMRAPSVEAGLYDLVVDPSNLWLTIHESIGHATELDRALGYEAAYAGTSFATFDQLGKLRYGSELMNVTGDRTAEHGLATIGYDDEGVEGQSWDLVKDGTLVGYQLDRRIAKLTGFERSNGCAYADSPGHVPVQRMANVSLRPDPAGMSTEDLIGGVERGIYVVGDRSWSIDMQRYNFQFTGQRFYRIENGRLAGQLRDVAYQATTTDFWGSMSAVGGPQTYVLGGAFNCGKAQPGQVAAVSHGCPSALFKGVNILNTTQEAGR
>NZ_CP015098.1|WP_062926060.1|2100345_2101740_+|peptidase
MSARSSKPHEVVERALELSRADGCVVIADERSTANLRWAGNALTTNGVTRGRTLTVVATVDGKEGTASGVVSRSAVTPDELEPLVRAAEAAARGAGPAEDAQPLVTGVERSPEFTEAPAETSSAVFADFAPALGEAFARARAGGRELYGFANHETVSSYVGTSTGLRLRHDQPNGTLELNAKSPDRTRSAWAGRSTRDFKDVDPAALDAELAVRLGWAERRVELSAGRYETLLPPTAVADLLIYQMWSASGRDAVEGRTVFSKPGGGTRVGEKLTDLPLTLRSDPDEPGLESAPFVIAHSSGGDQSVFDNGLPLTATEWMREGELRHLTTSRHSAGLTGLPVSPGIDNIVLDGGEDRCLEEMVANTGRGLLLTCLWYIREVDPASLLLTGLTRDGVYLVENGEVTGEVNNFRFNESPVAVLGRATEAGRTEKTLPREWSDWFTRAAMPALRVPDFNMSSVSQGV

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Crispr_ID: NZ_CP015098_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_4

2810225-2810413

Orphan

Consensus_repeat	Method
TGCGCACCGGCGACGGGTCCATCCGCG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP015098_4

>merge|NZ_CP015098|4|2810225-2810413|CRISPRCasFinder
TCCGCACCGGCGACGGATCCGTCCGCGTCACCGACACCACCGGCCCCGTGGAGGTGCGCACCGGCGACGGGTCCATCCGCGTCACCGGCACCAGCGGTCCGCTGCGGATGCGCACCGGCGACGGGTCCATCCGCGCGAACGTCTCCTCCCGCGACGTCCGCACCCACACCGGCGACGGTTCGGTCCGCC

>NZ_CP015098|4|4|2810225-2810413|CRISPRCasFinder
TCCGCACCGGCGACGGATCCGTCCGCG	TCACCGACACCACCGGCCCCGTGGAGG
TGCGCACCGGCGACGGGTCCATCCGCG	TCACCGGCACCAGCGGTCCGCTGCGGA
TGCGCACCGGCGACGGGTCCATCCGCG	CGAACGTCTCCTCCCGCGACGTCCGCA
CCCACACCGGCGACGGTTCGGTCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062926598.1\|2802135_2802588_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP015098.1\|WP_062926617.1\|2821329_2821905_-\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NZ_CP015098.1\|WP_062926606.1\|2808857_2809427_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981
NZ_CP015098.1\|WP_033306109.1\|2812450_2812672_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|274226
NZ_CP015098.1\|WP_174569509.1\|2807506_2807863_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062926608.1\|2810693_2812094_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP015098.1\|WP_062926615.1\|2819192_2819930_-\|Tellurium-resistance	unknown	unknown	gnl\|CDD\|226595
NZ_CP015098.1\|WP_062926612.1\|2814250_2816815_-\|phosphoribosyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|378594
NZ_CP015098.1\|WP_062926600.1\|2803599_2804886_+\|inositol-phosphorylceramide-synthase	unknown	unknown	gnl\|CDD\|239481
NZ_CP015098.1\|WP_062926614.1\|2818240_2819155_+\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NZ_CP015098.1\|WP_062926610.1\|2812729_2813521_+\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP015098.1\|WP_062926603.1\|2806383_2806737_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062926604.1\|2806749_2807403_-\|DUF305-domain-containing-protein	unknown	unknown	gnl\|CDD\|367619
NZ_CP015098.1\|WP_062926602.1\|2805380_2806295_+\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|235821
NZ_CP015098.1\|WP_062926599.1\|2802873_2803470_+\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP015098.1\|WP_062926613.1\|2816846_2818013_-\|HpcH/HpaI-aldolase/citrate-lyase-family-protein	unknown	unknown	gnl\|CDD\|379744
NZ_CP015098.1\|WP_062931417.1\|2799907_2802052_+\|FAD/NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|379196
NZ_CP015098.1\|WP_062926616.1\|2820058_2821204_-\|DUF475-domain-containing-protein	unknown	unknown	gnl\|CDD\|237583
NZ_CP015098.1\|WP_062926611.1\|2813417_2814251_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319822
NZ_CP015098.1\|WP_062926601.1\|2805041_2805278_-\|DUF2277-domain-containing-protein	unknown	unknown	gnl\|CDD\|378364

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062926598.1\|2802135_2802588_+\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	7.26356e-14
NZ_CP015098.1\|WP_062926617.1\|2821329_2821905_-\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	1.1431e-120
NZ_CP015098.1\|WP_062926606.1\|2808857_2809427_+\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	1.0926e-12
NZ_CP015098.1\|WP_033306109.1\|2812450_2812672_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|274226	TIGR02605, CxxC_CxxC_SSSS, putative regulatory protein, FmdB family. This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (SP:Q50229, ). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors. [Regulatory functions, DNA interactions].	4.30413e-10
NZ_CP015098.1\|WP_062931417.1\|2799907_2802052_+\|FAD/NAD(P)-binding-protein	gnl\|CDD\|379196	pfam13454, NAD_binding_9, FAD-NAD(P)-binding.	7.4463e-44
NZ_CP015098.1\|WP_062926608.1\|2810693_2812094_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	1.80248e-06
NZ_CP015098.1\|WP_062926615.1\|2819192_2819930_-\|Tellurium-resistance	gnl\|CDD\|226595	COG4110, COG4110, Uncharacterized protein involved in stress response [General function prediction only].	9.19712e-55
NZ_CP015098.1\|WP_062926612.1\|2814250_2816815_-\|phosphoribosyltransferase-domain-containing-protein	gnl\|CDD\|378594	pfam11202, PRTase_1, Phosphoribosyl transferase (PRTase). This PRTase family is fused to a C-terminal RNA binding Pelota domain, pfam01248. These genes are found in the biosynthetic operon associated with the Ter stress response operon and are predicted to be involved in the biosynthesis of a ribo-nucleoside involved in stress response.	2.33448e-150
NZ_CP015098.1\|WP_062926600.1\|2803599_2804886_+\|inositol-phosphorylceramide-synthase	gnl\|CDD\|239481	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.	5.5404e-20
NZ_CP015098.1\|WP_062926610.1\|2812729_2813521_+\|VTT-domain-containing-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.0314e-45
NZ_CP015098.1\|WP_062926604.1\|2806749_2807403_-\|DUF305-domain-containing-protein	gnl\|CDD\|367619	pfam03713, DUF305, Domain of unknown function (DUF305). Domain found in small family of bacterial secreted proteins with no known function. Also found in Paramecium bursaria chlorella virus 1. This domain is short and found in one or two copies. The domain has a conserved HH motif that may be functionally important. This domain belongs to the ferritin superfamily. It contains two sequence similar repeats each of which is composed of two alpha helices.	1.10043e-52
NZ_CP015098.1\|WP_062926601.1\|2805041_2805278_-\|DUF2277-domain-containing-protein	gnl\|CDD\|378364	pfam10041, DUF2277, Uncharacterized conserved protein (DUF2277). Members of this family of hypothetical bacterial proteins have no known function.	5.96865e-24
NZ_CP015098.1\|WP_062926599.1\|2802873_2803470_+\|VTT-domain-containing-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	4.57967e-12
NZ_CP015098.1\|WP_062926613.1\|2816846_2818013_-\|HpcH/HpaI-aldolase/citrate-lyase-family-protein	gnl\|CDD\|379744	pfam15617, C-C_Bond_Lyase, C-C_Bond_Lyase of the TIM-Barrel fold. This family of TIM-Barrel fold C-C bond lyase is related to citrate-lyase. These genes are found in the biosynthetic operon, with other enzymatic domains, associated with the Ter stress response operon and are predicted to be involved in the biosynthesis of a ribo-nucleoside involved in stress response.	1.08694e-173
NZ_CP015098.1\|WP_062926614.1\|2818240_2819155_+\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	7.04931e-65
NZ_CP015098.1\|WP_062926616.1\|2820058_2821204_-\|DUF475-domain-containing-protein	gnl\|CDD\|237583	PRK14013, PRK14013, hypothetical protein; Provisional.	0
NZ_CP015098.1\|WP_062926611.1\|2813417_2814251_-\|hypothetical-protein	gnl\|CDD\|319822	cd07520, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.53802e-06
NZ_CP015098.1\|WP_062926602.1\|2805380_2806295_+\|2-dehydropantoate-2-reductase	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	3.60877e-49

>NZ_CP015098.1|WP_062926606.1|2808857_2809427_+|DinB-family-protein
MTRSERLADQLDRHWHKNLRPRLHGLVDEEYFWEPVRDCWSIRPRGTSAAPMSGGSGEWTMDHASPDTVPTPAPVTTIAWRLAHIIVSCLGYRVGWHFGGQDVDSRTFAYAGTADEALKQLDEMYARWNKGVRALSDADLENPPTVGPERFPMEGIVLHVNRELIHHGAEISLLRDLYRWQDGAVPRRT
>NZ_CP015098.1|WP_174569509.1|2807506_2807863_-|hypothetical-protein
MLCVLGLLAGLLGMHGLAPGGGLSRQAHVMQGHQARTSQASVSPTHVMPYLHCGDGHVRHADATCASGAVGGGPVLPPLVPDPVPVAAGESAVRGYAVADPDGARAPPSLAELQLLRI
>NZ_CP015098.1|WP_062926604.1|2806749_2807403_-|DUF305-domain-containing-protein
MSNSIRTLARRAALVAATGAAAVVLAACGGDGADRAAGGAGHGDAGSHGPTGTPSATGAHNPQDVTFAQGMIPHHRQALEMARLAGGRASSGAVKDLAGRIEKAQDPEIRTMTGWLKTWGEDVPQAGGGMDHSGSGHSGMPGMMGDEDMAALEKLTGKAFDHQFLTLMVEHHEGAVEMARTEQSKGRYGPAKAMAGDIVTAQQAEIREMNGMLGDQS
>NZ_CP015098.1|WP_062926603.1|2806383_2806737_+|hypothetical-protein
MATTYDFPSDLLAGQEELHQVRAELSALLKRLPWSVEPLDGFSDDNGWRKVERPASPGWSADEQAEVEKLRQREHELAVFVTTHRYWSELAGPERVAARSELKHAHEVPPEETGGTS
>NZ_CP015098.1|WP_062926602.1|2805380_2806295_+|2-dehydropantoate-2-reductase
MANELTVAVLGPGGVGGLLAALLSRSGHRVICLSGEQTAETLRARGIQVRSARFGDFTARVEADTELREPVDACLVTVKDTALDAASARVPAPVLGDGLLVPFLNGVEHPAALRARYRPDRVAPAVIRVESTRVAPGVVEHGSPFAEIDLTGTDVPRPRLDTLAEAFATAGPATRVLEDETAALWAKMSFLAPFALLTTRYGLPLGDVRTRHRDELTALVEEAAAISQACGGPADPAQALARYDAFPAATKSSMQRDAEAGRPLELDAIGGALLRAAERHAVPAPVAARVVGELSDRTGGAARR
>NZ_CP015098.1|WP_062926601.1|2805041_2805278_-|DUF2277-domain-containing-protein
MCRSIKTLRPPAMPEEATEADVRAAALQYVRKVSGFRAPAAHNQEVFDRAVEAVAQATAELLDGLEVRGAGARKASRA
>NZ_CP015098.1|WP_062926600.1|2803599_2804886_+|inositol-phosphorylceramide-synthase
MLWAAAGAVTLGFLVALQITAHHLGIPGPITTQAREVIHAPKSGFLLYASLALTLVVLTWRQRLIALGSALGIDLVFLLVRWATGTYPAEGHPFGNGALWVILGVAVFALVRRTGPERVLMLKGVGLGLLLVTGRKTGDTWLLITSQTRPVTLDPYVAMADHALGNPSWLAGRLLRASGPVGEHALDYVYAQLAVAAVCVALYQLRNVAAEQRFPRHHLVRTFLLIGLLGPAFYMIYPVVGPMFAYGPEGGHWAAADLWPDTLPPITTPYELPFDEITPRNCMPSLHTAWATTIFIHSRKGPRALRYAGTFWLVATLAATLGFGWHYGVDLIAGVVFAYTVEAALRTYDRGWDRAGVRLIAYGTAVFTVLLASYRLVPLEMAAHPWVSGPLLLLAMASVVYGYLRTTKLWEAEATPAPRPEPQPELAV
>NZ_CP015098.1|WP_062926599.1|2802873_2803470_+|VTT-domain-containing-protein
MPEHLGLLIGSPWIYAVVALSVLLDVFLPVLPSGVLVITAATAAAAGTAADVPDILALTLCAATASVLGDLLAYRLAWRGGARLDRAISRSRRLTTAQKRLGAALARGGGALVVLARFAPAGRSVVSLGAGAARRRARDFLPWSALAGLTWATYSVALGYFGAHLLGASWVATAVSVGALFGAGAGAAYLMRREPRTS
>NZ_CP015098.1|WP_062926598.1|2802135_2802588_+|DoxX-family-protein
MTARLNGAQPYALGLFRIVVGLLFACHGAVALFGVLGGVDGKGGTAATGAWPNWYAAVIELVGGTLVLLGLGTRIAAFISSGAMAYAYFKVHQPQGLWPIENSGEGAAMYCWAMFLLIFTGSGAFGLDRLLAKRTSTQEQRSPGQTPVAA
>NZ_CP015098.1|WP_062931417.1|2799907_2802052_+|FAD/NAD(P)-binding-protein
MVGAGPRGTSVLERLCASAPELLPPGALLTVHVIDPDPPGAGRVWRTAQSPELLMNTVACQVTLFTDDSVDCSGPIRPGPSLHEWADGALGPDEYPTRADYGRYLEWVFAEVVRQAPPAVRVETHRARAVRLDDTPGDRQALTLDDGRILTGLSAVVLAQGHLPRTAGPDLLRHASHAARHGLRHVPPANPADVDLSSIPPGEPVLLRGLGLNFFDHTALLTTGRGGRFVRDAGGLRYLPSGREPRLFAGSRRGVPYQARGDNAKGPYGRHVPLVLTPEVIAGFRKRADSGEAPDFLAEIWPLVAKEVETVYYATLIRRAADGAGRERDLAGRERDLAEQDRDLARHERDLARRERELAGRDRDLAGQERKLAGRDRDLAGQERELAGRDRDLAGQERELARRERELAGLEREFAGLEREFVDRFLAVPHGDPREAPLLGEFRVPDGDRWCWERISRPYAGRDVAHPGRWRDWLLAHLREDAAQAALDNVHGPLKAALDVLRDLRNELRLIVDHGGLAGASRRDHLDRWYTPLNAFLSIGPPRRRIEELVALMEAGVMEVLGPRLRVTEEDGAWAAHSPDVPGSAVRVRTLIEARLPEPDLRHTADALLAGLLRSGRCRPHTVDGYETGGLDVTSRPYRLMDRQGVAHTRLFAFGVPTEGVHWVTAAGARPGVDSVTLSDADAVARAVLRATGPEIEPQREAKSWPNVELASIN
>NZ_CP015098.1|WP_062926608.1|2810693_2812094_+|hypothetical-protein
MTATPGQPDSPSVPRAHRPRRRIPRAHGPLRDTLALVGLPLLAALALPAAFAGGGTRRWFGGRAENQRAEAQAAKDAAAAAFYELDTAQRDLRISIETITAVDDSPAARRAVADFDALGRRIDEASHRYINAVDAHDLDRDDLEASAASRARGELTAAKEELGRVKQELDRFTDGLGPLLGKAETQLARLAPAVERARQALLAASNALDAVRASGLRADDLAARLAALSPELTKLNQGAGQHGVPQTLERAERVTREAEAVRVEAERLPDRAAEIDHRLVSLRTRAQALTTRSEQVEPTLSELRRRFTAACWQDLQHVPEAAAENVRQAETRLAEARAARGEQRWADATALLSTVRALLNNTDEAVSAAGDRLHRLNAVQKDPQQEIDRTRFAIRDAQRLAMAGRNTPDPRHAHPLDDAVARLDRAIAGLDGRHPDYWHFLTETEGIRRSVARVVDGIREERGAGH
>NZ_CP015098.1|WP_033306109.1|2812450_2812672_+|zinc-ribbon-domain-containing-protein
MPRYEYRCRTCGDTFELSRPMAASADPAACPSGHEDTVKLLSTVAVGGSASAPAPAPRAGGGGGGCCGGGCCG
>NZ_CP015098.1|WP_062926610.1|2812729_2813521_+|VTT-domain-containing-protein
MTAIAADAGPQWVNDLMDALGAPGAGLAIALENLFPPLPSEVILPLAGFAASSGRMSLLAVLLWTTAGSVIGALALYGVGALLGRDRTVAIAARLPLVKVSDIEKTEAWFLKHGTKAVFFGRMIPIFRSLISVPAGVERMRLPVFLGLTTLGSAIWNTVFVLAGYFLGANWHQVSDIVSTYSKVVLAVAAVAVVAFIAVRLLRRPAGARGTARRATAPPHPHDDQDTRVLRRPVQAQLRRPVPPPGTPAGSAPRRGHPGREAP
>NZ_CP015098.1|WP_062926611.1|2813417_2814251_-|hypothetical-protein
MPVLVASDLDRTLIYSAAALALTMPDARAPRLLCVEVHESKPLSYMTETAARLLTDLGDAAVFVPTTTRTRKQYQRINLPGPEPTYAICANGGHLMVDGVSDPDWHAQVTARLADQCAPLAEVQEHLLRAADPVWVRKHRVADDLFAYLVVERELLDEDWVKELAVWAENRGWTVSLQGRKIYAVPKPLTKSAAMREVARRTGADLTLAAGDSLLDTDLLLAADQGWRPGHGELADTGFAAPSIRVLPDRGVLAGERILREFLEVVRGAGAAPGPGA
>NZ_CP015098.1|WP_062926612.1|2814250_2816815_-|phosphoribosyltransferase-domain-containing-protein
MEKAVNEGEYREVRDDADGVWSGSWVAERLGVELAGDGRLTGLLGLALRRNPKRAHLLVSNVLGKHVPQSPSVVYGYGVELGRRVRDLLGDDEARRAVVLGYAETATGLGHSVADGLGLAPYLHSTRRPVAGVTPAGGFEESHSHATSHLLLPEDPALFTGDGPLVLVDDEFSTGNTVLNTVRDLHQRYPRRRYVVVALVDMRSAADANRLADFAEEIGARVDLVTAASGTVRLPEGVLEKGQELVARYEAGGAAEGRMPAAAPSGPFAQFPAPLEGVASGARGTARRAPTGPRPDDNRIDLHWPADLPDGARHGFTPAHRARLEAALPAMAARIAEALPHNARRVHVLGFEELMYAPLRLARELERTTDIEVRYSTTTRSPVLAVDDPGYAIRTRLAFPAHDDPADGPGERYAYNVAGAGFDAVVAVVDSAADTPALHAPDGLLARLAAHTPRVLLAVIPSYAPERPSMLPEPLRGPAFSSYAPEEVGWLLQDLSDVTLEAPTEEREEAIQSGGAHYAESLPVEYQPSEQYQELFHAALKESAARIAQAVGVVTETVLAERSPRPVLVSLARAGTPVGILMRRWAQHRHGLDLPHYAVSIVRGRGIDANALRWLAEHHDPRDVVFVDGWTGKGAITRELAQALEEFEKSDGITGFDPEIAVLADPGSCVRTYGTREDFLIPSACLNSTVSGLISRTVLRADLVGPHDFHGAKFYRELARTDVSVAFLDAVSARFPEVTDAACAQAKELLATDRSPTWEGWAAVERISEEYAIHDVNLVKPGVGETTRVMLRRVPWKVLARAGAGSDLDHVRLLAEQRGVPVEEVDGLPYTCVGLIHPKYTRGATGADGKAVSV
>NZ_CP015098.1|WP_062926613.1|2816846_2818013_-|HpcH/HpaI-aldolase/citrate-lyase-family-protein
MRHFGHVAPEVRKRLFFREPCAFTPDSPARLLAAALGATLYSPATRPRLADDVLKQAARGVVSMVLCLEDSIDDAEVGPGEENLVRQITALAGLPDADPPLLFIRVRVPEQIPDLVRRLGPAVRLLSGFVLPKFTEERGIPFLEALATAEAESGRRLFAMPVLESPELLYRESRVETLEGIFRAIDKYRDRVLALRLGVTDFCSSYGLRRGPDMTAYDVQIVASVIADVVNMLGRADGTGFTVTGPVWEYFRVQERMFKPLLRQSPFLEVQAAELREKLIEHAMDGLLREISLDHANGLLGKTCIHPSHVLPVHALSVVSHEEFTDAQDILRPERGGGGVLRSAYTNKMNEVKPHRAWAERTLLRAEVFGVANQDIGFVELLAAGLPA
>NZ_CP015098.1|WP_062926614.1|2818240_2819155_+|TerD-family-protein
MTHAMLKGSNVPLEATTVRAVLRWTPGQGVPDVDASALLLGPDGRVRSDEDFVFYNQPRHPAGKVWRLGKKRVAEGLTDTIQTDLAGVESGVGRILLVASADGTTFDRVRELRILLYDAADTGTEALAYFDVTPETGEETALICGELYRRGEGWKFRALGEGYSNGLKGLATDFGISVDESEAAAEEATTTVPAPPTTNTAAQPTTAGTSSQSPEVSVPLPPEQPAAVPGQPGYGYPPQQPPPTQPAYGYPQTTGRPAYGYPQAPAAARGAAGAQTGYGYPPPVTAVPDPDFRLPPQGPQFVGR
>NZ_CP015098.1|WP_062926615.1|2819192_2819930_-|Tellurium-resistance
MGLFDGLRRGREAQFDSGDASTNAIELTKRRAQISLTKQGAATGHLRVNLSWRMRTSDFGGSQRESLLRHPFRALKPPEVVGHSQSMVNVDLDLGCLYELQDGSKGVVQPLGGYFGETNAAPYVKLSGDDRFGSASGETMYINLDHREHIKRLLVFVYIYDQTPAFDRAHAIVTLYPSNGPRIEIHLDERQPQARSCAVVMIEKVKNEIIVRREAKFVYGFQAELDRLYGWGLQWGRGYKTKVDR
>NZ_CP015098.1|WP_062926616.1|2820058_2821204_-|DUF475-domain-containing-protein
MVLKTFGWSFAVTALGLVAAIFYGGWTAFGVVAILSVLEISLSFDNAVVNAGILKKMSAFWQKIFLTIGILIAVFGMRLVFPVVIVALSAQLGPIEAVDLALTDKDQYQQYVTDAHPSIAAFGGMFLLMIFLDFIFEDRDIKWLKWLERPLAKLGKVDMLSVCIALIVLLISAMTFATQAHQHGGTHVDKAETVLLAGIGGLITYMIVGGLSGYFEDKLEEEEEREHEAEEEAVRSGKPRSAVVVAGKAAFFMFLYLEVLDASFSFDGVIGAFAITNDIVLMALGLGIGAMYVRSLTVYLVRQGTLDDYVYLEHGAHYAIGALAMILLVTIRYEINEFITGSVGVILIAWSFWSSVRRNRAIAAAEGDAGSDAKTEVSSGV
>NZ_CP015098.1|WP_062926617.1|2821329_2821905_-|TerD-family-protein
MGVTLAKGGNVSLSKAAPNLTQVLVGLGWDARSTTGAPFDLDASALMCSSGRVLGDEWFVFYNQLKSPDGSVEHTGDNLTGEGDGDDESLLIDLPKVPPQCDKIVFPVSIHMADERGQTFGQVSNAFIRVVNQADGQELARYDLSEDASTETAMIFGELYRYQGEWKFRAVGQGYASGLRGIALDFGVNVS

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Crispr_ID: NZ_CP015098_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_5

3347570-3347725

Orphan

Consensus_repeat	Method
CCCCCGGGGGCACAGAGGGCGAAGCCCCCGCCCGGGTCGGGGGCGGAGCCCCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_5

>merge|NZ_CP015098|5|3347570-3347725|CRISPRCasFinder
CCCCCGGGGGCACAGAGGGCGAAGCCCCCGCCCGGGTCGGGGGCGGAGCCCCGGGGCGGGCCGGTCTTCCGGCCCACGGCTACCGGCGGATGGGCGGGAAACCCCCGGGGGCACAGAGGGCGAAGCCCCCGCCCGGGTCGAGGGCGGAGCCCCGGG

>NZ_CP015098|5|5|3347570-3347725|CRISPRCasFinder
CCCCCGGGGGCACAGAGGGCGAAGCCCCCGCCCGGGTCGGGGGCGGAGCCCCGGG	GCGGGCCGGTCTTCCGGCCCACGGCTACCGGCGGATGGGCGGGAAA
CCCCCGGGGGCACAGAGGGCGAAGCCCCCGCCCGGGTCGAGGGCGGAGCCCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062927005.1\|3357962_3359249_+\|lysine-N(6)-hydroxylase/L-ornithine-N(5)-oxygenase-family-protein	unknown	unknown	gnl\|CDD\|226017
NZ_CP015098.1\|WP_062926989.1\|3337099_3337951_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|379138
NZ_CP015098.1\|WP_062926996.1\|3346029_3347187_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173849
NZ_CP015098.1\|WP_062926997.1\|3347780_3348374_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP015098.1\|WP_062926995.1\|3345118_3345994_-\|acyl-CoA-thioesterase-II	unknown	unknown	gnl\|CDD\|224857
NZ_CP015098.1\|WP_062926999.1\|3350092_3352009_+\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	unknown	unknown	gnl\|CDD\|227111
NZ_CP015098.1\|WP_062926994.1\|3344247_3345036_+\|phosphatase	unknown	unknown	gnl\|CDD\|374030
NZ_CP015098.1\|WP_062927001.1\|3352961_3354122_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173847
NZ_CP015098.1\|WP_079129364.1\|3338330_3338933_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062926992.1\|3339729_3341415_-\|thiamine-pyrophosphate-binding-protein	unknown	unknown	gnl\|CDD\|223107
NZ_CP015098.1\|WP_062926991.1\|3339110_3339713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062927006.1\|3359245_3359797_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP015098.1\|WP_062926998.1\|3348461_3350078_+\|methylcrotonoyl-CoA-carboxylase	unknown	unknown	gnl\|CDD\|178415
NZ_CP015098.1\|WP_062927002.1\|3354333_3355377_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223687
NZ_CP015098.1\|WP_062926988.1\|3335927_3336896_-\|esterase-like-activity-of-phytase-family-protein	unknown	unknown	gnl\|CDD\|379191
NZ_CP015098.1\|WP_062927000.1\|3352005_3352956_+\|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl\|CDD\|163676
NZ_CP015098.1\|WP_062927003.1\|3355523_3356378_+\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|99790
NZ_CP015098.1\|WP_062926993.1\|3342613_3344113_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377939
NZ_CP015098.1\|WP_030838119.1\|3341411_3342392_-\|agmatinase	unknown	unknown	gnl\|CDD\|212538
NZ_CP015098.1\|WP_062927004.1\|3356536_3357979_+\|lysine-decarboxylase-DesA	unknown	unknown	gnl\|CDD\|99743

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062927005.1\|3357962_3359249_+\|lysine-N(6)-hydroxylase/L-ornithine-N(5)-oxygenase-family-protein	gnl\|CDD\|226017	COG3486, IucD, Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP015098.1\|WP_062926989.1\|3337099_3337951_-\|serine-hydrolase	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.2848e-13
NZ_CP015098.1\|WP_062926996.1\|3346029_3347187_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	2.49964e-142
NZ_CP015098.1\|WP_062926997.1\|3347780_3348374_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	6.59752e-14
NZ_CP015098.1\|WP_062926995.1\|3345118_3345994_-\|acyl-CoA-thioesterase-II	gnl\|CDD\|224857	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism].	2.99088e-122
NZ_CP015098.1\|WP_062926999.1\|3350092_3352009_+\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP015098.1\|WP_062926994.1\|3344247_3345036_+\|phosphatase	gnl\|CDD\|374030	pfam15698, Phosphatase, Phosphatase. Members of this family have phosphatase activity.	4.86496e-137
NZ_CP015098.1\|WP_062927001.1\|3352961_3354122_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	9.34564e-161
NZ_CP015098.1\|WP_030838119.1\|3341411_3342392_-\|agmatinase	gnl\|CDD\|212538	cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase. This agmatinase subfamily contains bacterial and fungal/metazoan enzymes, including proclavaminic acid amidinohydrolase (PAH, EC 3.5.3.22) and Pseudomonas aeruginosa guanidinobutyrase (GbuA) and guanidinopropionase (GpuA). PAH hydrolyzes amidinoproclavaminate to yield proclavaminate and urea in clavulanic acid biosynthesis. Clavulanic acid is an effective inhibitor of beta-lactamases and is used in combination with amoxicillin to prevent the beta-lactam rings of the antibiotic from hydrolysis and, thus keeping the antibiotic biologically active. GbuA hydrolyzes 4-guanidinobutyrate (4-GB) into 4-aminobutyrate and urea while GpuA hydrolyzes 3-guanidinopropionate (3-GP) into beta-alanine and urea. Mutation studies show that significant variations in two active site loops in these two enzymes may be important for substrate specificity. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	2.62921e-167
NZ_CP015098.1\|WP_062926992.1\|3339729_3341415_-\|thiamine-pyrophosphate-binding-protein	gnl\|CDD\|223107	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism].	1.94927e-139
NZ_CP015098.1\|WP_062927006.1\|3359245_3359797_+\|acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.14675e-62
NZ_CP015098.1\|WP_062926998.1\|3348461_3350078_+\|methylcrotonoyl-CoA-carboxylase	gnl\|CDD\|178415	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain.	0
NZ_CP015098.1\|WP_062927002.1\|3354333_3355377_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223687	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism].	3.86032e-21
NZ_CP015098.1\|WP_062926988.1\|3335927_3336896_-\|esterase-like-activity-of-phytase-family-protein	gnl\|CDD\|379191	pfam13449, Phytase-like, Esterase-like activity of phytase. This is a repeated domain that carries several highly conserved Glu and Asp residues indicating the likelihood that the domain incorporates the enzymic activity of the PLC-like phospho-diesterase part of the proteins.	7.52828e-62
NZ_CP015098.1\|WP_062927000.1\|3352005_3352956_+\|hydroxymethylglutaryl-CoA-lyase	gnl\|CDD\|163676	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	1.29764e-158
NZ_CP015098.1\|WP_062927003.1\|3355523_3356378_+\|siderophore-interacting-protein	gnl\|CDD\|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	1.21311e-78
NZ_CP015098.1\|WP_062926993.1\|3342613_3344113_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	9.69842e-21
NZ_CP015098.1\|WP_062927004.1\|3356536_3357979_+\|lysine-decarboxylase-DesA	gnl\|CDD\|99743	cd06450, DOPA_deC_like, DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.	1.18626e-128

>NZ_CP015098.1|WP_062926996.1|3346029_3347187_-|acyl-CoA-dehydrogenase-family-protein
MRRTVFNEDHEAFRETLRAFIEAEVVPVYDEWFAAGQAPRDFYYKLGELGIFGINVPEEFGGAGLDSHKFEAVLYEETARAGVAFGGSGVHVLLALPYIKMLATDEQKKRFLPKFVSGEEMWAIAMTEPGTGSDLAGMKSTAKLSEDGTHYVLNGAKTFITGGVHADRMIVCARTSAPTAEDRRHGISLFAVDTKSEGYSVGRKLDKLGLKTSDTAELAFVDVKVPVEDLLGEENKGFYYLGHNLASERWGIAFGAYAQAKAAIRFAKQYVQDRTVFGKTVASFQNTKFELAACQAELDAAEAVADRATEALDAGELTPAEAASAKLFCTEVAHRVIDRCLQLHGGYGFMNEYPIARLYADNRVNRIYGGTSEIMKSIIAKDMGL
>NZ_CP015098.1|WP_062926995.1|3345118_3345994_-|acyl-CoA-thioesterase-II
MSQALQDLLDLLDLEPIEENIFRGQSRSAVVPRVFGGQVAAQALVAAGRTVPADRPPHSLHAYFLRMGDPGAPIVYDVERIRDGRSFTTRRVVAVQHGRPIFSLSASFQEHEEGMDHQTPMPPAPDPAALPTSQERFRGYGHLDPKVVEHFLAAREAIDLRYVEEPPYGRFGQPREPHSQVWFRTNGKLDGPVDDALLHIVLATYVSDMTLLDSVLLAHGRGGWAVGDVVGASLDHAMWFHRPFRADEWLLYDQESPSASGGRGLGQARIYTQDGRLAVSVIQEGVVRVPR
>NZ_CP015098.1|WP_062926994.1|3344247_3345036_+|phosphatase
MPISGTPSRAELVEHLVRTRIAGDVATPRENNLSHYRKLANSDRHYWLGLELGDRWSDEQDVLAVMAERVGVNDDPEYRYGQDTIDPELTVDGLERMAGRLRKAADGQQRVLFATGHPGGLLDVHRATAAALRAAGCEIVVIPDGLTTEEGYVMQFADVAVLEHGATLWHTHSGEPMKAILTALERGGRPLPDLVVADHGWAGYAGQHGVDSVGYADCNDPALFIAEAEGTVQVTVPLDDHVISPRHYDPMTAYLLSAAGLD
>NZ_CP015098.1|WP_062926993.1|3342613_3344113_+|PucR-family-transcriptional-regulator
MEGTHTMPDPAVPPTPPVPLTALLAREDLALRQLAGPPAEAVVIHWVHTSEMADPYPYLLGGELLLSAGVHIPEAAGPATTYFDDYVTRITAAGGAALGFGVAPVHDTVPEALVAACAAHGLPLLEVPPRTTFSGVARAVWQLMAQARLSELRRVTEAQQSLAAAASRPDPVPSVLRRLAQRLGGFAVLYGPEGTEIARAGREPGSEVRGALTRLAEVVRPDGGPGERPVPASATNTVAGSHLASYALGAGHGFVLGVAEPEREAGDHTIASAAAVLLSLLTGEQQSGTGAARSSALVRLLLGAPPEEVAPLLGDGPWTVVHARPDGDDTPEPLAASALGAALGSALVDPAGDVVRVLVPAGRAPAPLPGWTLGVSAAVAPHDWPGADTQAARALARARATRTPLLRHGPRPALADLVPSGEAAAHAHALLAPVAAHPALTETLRTWLSLHGSWDRTAVALSVHRNTVRQRIARCATLLETDLDDPDVRMELWFALRQL
>NZ_CP015098.1|WP_030838119.1|3341411_3342392_-|agmatinase
MSSNETPRGPVDSSRVPRYAGPATFARLPRLDEVGRADVAVVGVPFDSGVSYRPGARFGGNAIREASRLLRPYNPAQDASPFALAQVADGGDIAVNPFNINEAVETVEAAADDLLGTGARLMTLGGDHTIALPLLRSVAKKHGPVALLHFDAHLDTWDTYFGAEYTHGTPFRRAVEEGILDTSALSHVGTRGPLYGKQDLTDDEKMGFGIVTSADVYRRGADEVADQLRQRIGDRPLYISIDIDCLDPAHAPGTGTPEAGGMTSRELLEILRGLASCNLVSADVVEVAPAYDHAEITSVAASHTAYELTTIMSRQIAAARKDSEAK
>NZ_CP015098.1|WP_062926992.1|3339729_3341415_-|thiamine-pyrophosphate-binding-protein
MTHDHDLVLRPTPAQTEAALNPPPGRTGGDLVVETLAGLGATTVFGLPGQHALGMFDALRRSDLRYIGLRVENNAGFAADAYGRITGEAAPLLLSTGPGALTSLAALQEAAAASAPVLAISSQVPTAGLGGGRHGYLHELPDQAASFRGVVKSVHTVRTQSQIPSAIEAAWKSALSAPHGPVWVEIPQDVLLAETAVPVVTGGDAFPEELVPRPELTAVAADLLSRAARPAIIAGGGVVRADASGKLKQLAERLQAPVVTTPGGKGAFPWKHPLSLQSWIEDRHTTDFLEDADVLLVVGSGLGELSSNYHTFKPRGRVVQIEADLGKLESNHPALGIHADARLALQALLETVAERQDPGAPERVREVLAEVADRIAAQELTLEQDVLASVRTALPADSPSFWDMTILAYWAWSAFDAKGPNHMHSAQGAGGLGYAFPAALGAAAADPTRPVLAVSGDGGALYSIAELATARQYDLDVTWLIVDDGGYGILREYMSDAFGQATATELTRPDYVALAESFGVPGVRTTPENLEQDLAKALRAPGPSVVLLPAVLRMFAPTHLG
>NZ_CP015098.1|WP_062926991.1|3339110_3339713_+|hypothetical-protein
MSPRKALVAALAAALLAGPGVAQAATVQAPPAPARERAAAATITWSLVRASNPTADQRSAYDQITKAMNAAVARYNNLSDLGKTITVRYEPGVPTADGNINGTIRFGSNRSYMNERTALHEIAHTIGVGTSSGWSRLGGSGTWTGGQATALVRQYDGSGAKISTGGGHFWPYGLNYDNEWSGTAADRHVHIVAAMVRDGL
>NZ_CP015098.1|WP_079129364.1|3338330_3338933_+|hypothetical-protein
MSTGDMRTVVRLLTAVERTEQQERTLARVRTECERTDARFQEQGIDLDVSISRALDELIDGTPSTDLCPAYSYAFYQAVAAHFSDPTDLGAWRRPAWFYAMDDELARHGVPSDLLPGTFLFSGPPLRLPHPGDAVPAIGTLPAQRASALADVYGSVLGRLDPEFRDAARRFARVMRFEAEEWESARKLGRNPDTLLFWFH
>NZ_CP015098.1|WP_062926989.1|3337099_3337951_-|serine-hydrolase
MTSGISRRARVLAAAVGTGVLVPLVATATPASAAAPAVTCTSAKAGLAAKLKKDITAALATRKGTVAVGLYDRSTNTTCTLRASSAYDSASIVKVTVLATLLWDAKKTNRYLTDRENTLAKAMITKSDNAATSTLWKQLGMTKIKNFLAAAGMTQTKPGANGYWGLTQITVTDEQKLLKLLTAKNAVLSDNSRAYIVKLMGQVVSSQRWGTPYGVPSGVTVAVKNGWLQRSTNGWRVHSVGAFKGGGHDYVMTVLSHGNSTMNYGIATIQAVAKVIHKDLAAS
>NZ_CP015098.1|WP_062926988.1|3335927_3336896_-|esterase-like-activity-of-phytase-family-protein
MPLRTHLALLTAGLAAATCLTAAGPAQATAHACSPSVSIDRFSDALDKTTYDDTFVGNLSALEVDRDGSLAALSDRSSLFRLDARTLSPRSVTSLADETGAALDSEGLVVDRDGTYLVTSETEPSVRRYSRTGRILDRFPVPDDLRVSPAGRGQPNGTFEGLTLLPGGRTLVASMEYALSGDPADTVRFQTWTRHGSHFRLAARYTYRTDPGLGVPEIKATPDGRLLVLERGFTAGVGNTVRLYLADPRHAMKKTLLTDLVTCPSLGATARQPQPNPLLDNIEGMTITGRTRNTLKVLLVSDDNENPAQTTRFYHLRVRASA
>NZ_CP015098.1|WP_062926997.1|3347780_3348374_-|TetR/AcrR-family-transcriptional-regulator
MATRTDASTRREQILKEAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFAGKDAMLAELLVGISGQLLTGAKRRLTEVDGGGAEQVLDSLIEGHIDFALDDRPLITLHDRELDRLRDSDRKMVRQLQRQYVELWVGVVREVYPGLGEPAARSAVHSVFGLLNSTPHLGRGGSLPGRGATAELLHRMARGAFAAAGV
>NZ_CP015098.1|WP_062926998.1|3348461_3350078_+|methylcrotonoyl-CoA-carboxylase
MHEAPELTSAADPASEAFRANEEAHHTLVEELRSKLAAAAQGGGEKARARHTARGKLLPRDRVDTLLDPGSPFLELAPLAADGMYEGQAPAAGVIAGIGRVSGRETVVIANDATVKGGTYYPMTVKKHLRAQEVALDNRLPCVYLVDSGGAFLPMQDEVFPDRDHFGRIFYNQARMSGAGIPQIAAVLGSCTAGGAYVPAMSDEAVIVRNQGTIFLGGPPLVKAATGEVVTAEELGGGEVHSRVSGVTDHLAENDAHALRIVRTIVSTLPARQALPWEVTEATEPKVDPHGLYGAVPVDSRTPYDVREIIARVVDGSRFAEFKSEFGQTLVTGFARIHGHPVGIVANNGILFSESAQKGAHFIELCDQRGIPLVFLQNISGFMVGKDYEAGGIAKHGAKMVTAVACTRVPKLTVVVGGSYGAGNYSMCGRAYSPRFLWMWPNAKISVMGGEQAASVLATVKRDQLEGRGESWPAEDEDAFKAPIRAQYERQGNAYYATARLWDDGVIDPLDTRQVLGLALTACANAPLGDPQFGVFRM
>NZ_CP015098.1|WP_062926999.1|3350092_3352009_+|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha
MFETVLVANRGEIAVRVIRTLRSMGVRSVAVFSDADADARHVREADTAVRIGPAPASMSYLSVERLLEAAARTGAQAVHPGYGFLAENAAFARACAEAGLVFIGPPADAIALMGDKIRAKETVQEAGVPVVPGGRDPDLAEAARELGAPVLLKPSAGGGGKGMRLVRDLTRLEDEIASARREARASFGDDTLLVERWIDRPRHIEIQVLADGHGNVVHLGERECSLQRRHQKIIEEAPSVLLDEETRSAMGEAAVQAARSCGYRGAGTVEFIVPGTDPSSYYFMEMNTRLQVEHPVTELITGLDLVEWQLRVAAGEPLGFSQQDVRLTGHAVEARICAEDPARGFLPSGGTVLRLREPQGDGVRTDSGLTEGTEVGSLYDPMLSKVIAYGPDRATALRKLRAALAETVTLGVQTNAGFLRRLLAHPAVVSGDMDTGLVEREVEDLVPTDVPEEVYEAAAAVRVEALRPEPGGWTDPFSVPSGWRLGGVAKPPVFPLRVQEPLEYTPRGTATVTDDRVAVTLDGVRHTFHRAADWLGRDGDAWHVRDHDPVAASLTRAAHGGADSLTAPMPGTVTVVKVAVGDEVSAGQSLLVVEAMKMEHVISAPHAGKVTELDVAPGTTVAMDQVLAVIAPHEEAAQ
>NZ_CP015098.1|WP_062927000.1|3352005_3352956_+|hydroxymethylglutaryl-CoA-lyase
MTVPGLPMAVPSRDLPTRVRIHEVGARDGLQNEKATVPTEVKAEFIRRLADAGLTTIEATSFVHPKWVPQLADAEQLFPLVSDLPVALPVLVPNERGLDRALGLGARRVAVFASATESFAKANLNRTVDEALAMFEPVVSRAKAASVHVRGYLSMCFGDPWEGAVPIPQVVKVCRALLDMGCDELSLGDTIGVATPGHVVALLAALDEAGVPPTALGVHFHDTYGQALANTLAALQQGVTTVDASAGGLGGCPYAKSATGNLATEDLVWMLRGLGIDTGIDLGRLVATSTWMAAQLGRPSPSRTVRALSHEDSEEH
>NZ_CP015098.1|WP_062927001.1|3352961_3354122_+|acyl-CoA-dehydrogenase-family-protein
MDYRLSPELEELRRTVEEFAHEVVAPKIGDFYERHEFPYEIVREMGRMGLFGLPFPEEYGGMGGDYLALGVALEELARVDSSVAITLEAGVSLGAMPLHLYGTEAQKQEWLPRLCSGEVLGAFGLTEPDGGSDAGATRTTARLDESTNEWVINGTKCFITNSGTDITGLVTVTAVTGRTADGKPRISSIIVPTGTPGFTVAAPYSKVGWNASDTRELSFTDVRVPAENLLGEEGRGYAQFLRILDEGRIAIAALATGLAQGCVDESVKYAKERQAFGKPIAANQAIQFKIADMEMKAHTARLTWRDAAVRLVSGAPFKKEAALAKLHSSTIAVDNAREATQIHGGYGFMNEYPVARMWRDSKILEIGEGTSEVQRMLIARELGLVG
>NZ_CP015098.1|WP_062927002.1|3354333_3355377_+|ABC-transporter-substrate-binding-protein
MSNARTARFSRRGLLAAGGALGIGALVTACGSEDSKDGGSDAKGAAKSGPWSFKDDRGKTVSLDQVPTKIVAFTGVAAALYDYGIEVEGVFGPTKTKDGKADVQAGDMDVSKLTVFGNRFDQFNVEQYAAFQPEVLITTTFDAAGTLWYVPEASKDKIAKLAPSVALSVFDRQMPKPLQRMAELAESLGADLKDAKVVEAKKRFEAASERLRKAAKSRPEIKVLAGSASDAIFYVSGSNFSIDLEYFKALGVNLVEPPKKAMEANGGWFENLSWENVDKYPADVIMMDDRASTIQPADITEATWKKLPAVKAGQVIARSPEPILSYDKCTPLVENLAKAIESAKKVS
>NZ_CP015098.1|WP_062927003.1|3355523_3356378_+|siderophore-interacting-protein
MTTAVAAPFRFFSLQVVRTRRLGPSLVRVTFGGPDLHAFHSDGHDQSLSLFLPHPGQPEPVVPLELGDGWWQGWRELPEDVRAVMRSYTLRGLRRDPDEIDIDFALHGIGPGASVQAGPASRWAARAAAGDRVLLLGPAVADNRAIRFRPPEDTDLVVVWGDETAVPAASAIVEALPAGTRARVFLEVPHADDIQDLTTEADAEITWLVREERGAEGAPLALDALRAAHLPSAERPYVWIAGESGCVKELRRHFVRERGIDRRRVTFVGYWRRGVSEEQLRAEA
>NZ_CP015098.1|WP_062927004.1|3356536_3357979_+|lysine-decarboxylase-DesA
MRSHLLNDTTAEQYRRSVTDGVERVAAKLATTDRPFTGITVDALAPRIDGIDLDQPLHDTTAVLDELEDVYLRDAIYFHHPRYLAHLNCPVVIPAVLGEAVLSAVNSSLDTWDQSAGGTLIERKLIDWTTDRIGLGPAADGVFTSGGTQSNLQALLLAREEAKSDSLAKLRIFASEVSHFSVKKSAKLLGLGQDAVVSLPVDHDKRLQTVALARELERCAKDGLVPMAVVATAGTTDFGSIDPLPEIAELCEQYGTWMHVDAAYGCGLLASLKHRDRISGIERADSVTVDYHKSFFQPVSSSAVLVRDAATLRHATYHAEYLNPRRMVEERIPNQVDKSLQTTRRFDALKLWMTLRTMGADGIGQLFDEVCDLAREGWKLIAADPRFDVVVEPSLSTLVFRYIPAAVTDPAEIDRANLYARKALFASGDAIVAGTKVGGRHYLKFTLLNPETQASDIAAVLDLIAGHAEQYLGESLDRAS
>NZ_CP015098.1|WP_062927005.1|3357962_3359249_+|lysine-N(6)-hydroxylase/L-ornithine-N(5)-oxygenase-family-protein
MTARPENPAPFPATHDFVGIGLGPFNLGLACLTEPIDELDGVFLESKPDFEWHAGMFLDGAHLQTPFMSDLVTLADPTSPYSFLSYLKEKGRLYSFYIRENFYPLRVEYDDYCRWAAGKLSSIRFGTTVTEVTYEDELYVVQTTAGDTYRARHLVLGTGTPPHIPEACQGLGGDFLHNSRYLDSKAELQKKDSITLVGSGQSAAEIYYDLLSEIDVHGYRLNWVTRSPRFFPLEYTKLTLEMTSPEYVDYFRELPEATRYRLTAEQKGLFKGIDGDLINEIFDLLYQKNLGGPVPTRLLTNSALTSARYENGTYTLGFRQEEQGKEFELDSQGLVLATGYKYAEPEFLAPVKDRLVYDSHGNFDVARNYAIDVTGRGIFLQNAGVHTHSITSPDLGMGPYRNAYIIRELLGSEYYPVEKTIAFQEFAV
>NZ_CP015098.1|WP_062927006.1|3359245_3359797_+|acetyltransferase
MSATTGIGTLTVRPLDPLKDAGLLHSWVTHPKAAYWMMQDAKLQDVEREYMRIAAHEHHHAYLGLHEGRPAFLMEKYDPRYVELEGLYDPEPGDVGMHFLVAPTDRPIHGFTKAVITAVMDELFADPRTRRVVVEPDVSNKAVHALNEAVGFVPEREIDKPEKRALLSFCTRAQFLAARGVAV

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Crispr_ID: NZ_CP015098_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_6

3639505-3639585

Orphan

Consensus_repeat	Method
GCGCCCCCTGTCGGTCACGCGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_6

>merge|NZ_CP015098|6|3639505-3639585|CRISPRCasFinder
GCGCCCCCTGTCGGTCACGCGGGGGCTATGGGTGCACCGGGTGTCCCCGTGGGTGCGGGCGCCCCCGTCGGTCACGCGGGG

>NZ_CP015098|6|6|3639505-3639585|CRISPRCasFinder
GCGCCCCCTGTCGGTCACGCGGGG	GCTATGGGTGCACCGGGTGTCCCCGTGGGTGCG
GGCGCCCCCGTCGGTCACGCGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062927226.1\|3653381_3654383_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223200
NZ_CP015098.1\|WP_062927213.1\|3633408_3634023_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062927223.1\|3650500_3651007_+\|cysteine-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|380416
NZ_CP015098.1\|WP_062927210.1\|3624057_3625368_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP015098.1\|WP_107308329.1\|3643747_3644203_+\|metallopeptidase-family-protein	unknown	unknown	gnl\|CDD\|240574
NZ_CP015098.1\|WP_062927212.1\|3632323_3633370_+\|RDD-family-protein	unknown	unknown	gnl\|CDD\|224628
NZ_CP015098.1\|WP_079128979.1\|3645754_3649417_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224137
NZ_CP015098.1\|WP_062927211.1\|3631187_3632195_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676
NZ_CP015098.1\|WP_062927208.1\|3621866_3623069_+\|DUF4350-domain-containing-protein	unknown	unknown	gnl\|CDD\|379527
NZ_CP015098.1\|WP_062927221.1\|3644225_3645758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_010034659.1\|3649579_3649843_-\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP015098.1\|WP_030844668.1\|3643030_3643453_-\|DUF3499-domain-containing-protein	unknown	unknown	gnl\|CDD\|378788
NZ_CP015098.1\|WP_062927215.1\|3635937_3636912_-\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP015098.1\|WP_062927214.1\|3634157_3635615_-\|adenosylhomocysteinase	unknown	unknown	gnl\|CDD\|377487
NZ_CP015098.1\|WP_107308327.1\|3623068_3624058_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP015098.1\|WP_062927224.1\|3651042_3652002_+\|2-phospho-L-lactate-transferase	unknown	unknown	gnl\|CDD\|237443
NZ_CP015098.1\|WP_062927225.1\|3651998_3653318_+\|coenzyme-F420-0:L-glutamate-ligase	unknown	unknown	gnl\|CDD\|183957
NZ_CP015098.1\|WP_062927216.1\|3637068_3638220_-\|mannose-6-phosphate-isomerase,-class-I	unknown	unknown	gnl\|CDD\|185085
NZ_CP015098.1\|WP_062927218.1\|3639817_3641182_-\|phosphomannomutase/phosphoglucomutase	unknown	unknown	gnl\|CDD\|236557
NZ_CP015098.1\|WP_062927217.1\|3638274_3639402_-\|mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|378434

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062927226.1\|3653381_3654383_+\|hypothetical-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	2.82691e-25
NZ_CP015098.1\|WP_062927224.1\|3651042_3652002_+\|2-phospho-L-lactate-transferase	gnl\|CDD\|237443	PRK13606, PRK13606, LPPG:FO 2-phospho-L-lactate transferase; Provisional.	3.69129e-175
NZ_CP015098.1\|WP_062927223.1\|3650500_3651007_+\|cysteine-dioxygenase-family-protein	gnl\|CDD\|380416	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain. This family contains cysteine dioxygenase (CDO; EC 1.13.11.20), which catalyzes the conversion of cysteine to cysteine sulfinic acid, the first step in the biosynthesis of essential oxidized cysteine metabolites such as sulfate, hypotaurine, and taurine. CDO also plays an important role in the regulation of intracellular cysteine levels in mammals; CDO expression is altered in cancer cells, and abnormal or deficient CDO activity has been linked to Parkinson's disease, Alzheimer's disease, and rheumatoid arthritis. CDO is an iron-dependent thiol dioxygenase that uses molecular oxygen to oxidize the sulfhydryl group of cysteine to generate cysteine sulfinic acid. The CDO active site contains an amino acid-derived cofactor. These enzymes are found in prokaryotes as well as eukaryotes and belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.18479e-24
NZ_CP015098.1\|WP_062927210.1\|3624057_3625368_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.02817e-49
NZ_CP015098.1\|WP_107308329.1\|3643747_3644203_+\|metallopeptidase-family-protein	gnl\|CDD\|240574	cd12954, MMP_TTHA0227_like_1, Minimal MMP-like domain found in a group of hypothetical proteins from alphaproteobacteria and actinobacteria. The subfamily includes some uncharacterized bacterial proteins which show high sequence similarity with Thermus thermophilus hypothetical protein TTHA0227. However, they do not contain the conserved HExxH (x could be any amino acid) motif. They may not have any zinc metallo-peptidase activity.	4.21978e-26
NZ_CP015098.1\|WP_062927212.1\|3632323_3633370_+\|RDD-family-protein	gnl\|CDD\|224628	COG1714, COG1714, Predicted membrane protein/domain [Function unknown].	5.41994e-21
NZ_CP015098.1\|WP_079128979.1\|3645754_3649417_-\|glycosyltransferase	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	1.12732e-28
NZ_CP015098.1\|WP_062927211.1\|3631187_3632195_-\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	3.94857e-43
NZ_CP015098.1\|WP_062927208.1\|3621866_3623069_+\|DUF4350-domain-containing-protein	gnl\|CDD\|379527	pfam14258, DUF4350, Domain of unknown function (DUF4350). This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length.	1.25672e-07
NZ_CP015098.1\|WP_010034659.1\|3649579_3649843_-\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	2.09e-28
NZ_CP015098.1\|WP_107308327.1\|3623068_3624058_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.0226e-101
NZ_CP015098.1\|WP_062927215.1\|3635937_3636912_-\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.5204e-38
NZ_CP015098.1\|WP_062927214.1\|3634157_3635615_-\|adenosylhomocysteinase	gnl\|CDD\|377487	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase.	0
NZ_CP015098.1\|WP_030844668.1\|3643030_3643453_-\|DUF3499-domain-containing-protein	gnl\|CDD\|378788	pfam12005, DUF3499, Protein of unknown function (DUF3499). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 125 to 163 amino acids in length.	3.04377e-58
NZ_CP015098.1\|WP_062927225.1\|3651998_3653318_+\|coenzyme-F420-0:L-glutamate-ligase	gnl\|CDD\|183957	PRK13294, PRK13294, F420-0--gamma-glutamyl ligase; Provisional.	0
NZ_CP015098.1\|WP_062927216.1\|3637068_3638220_-\|mannose-6-phosphate-isomerase,-class-I	gnl\|CDD\|185085	PRK15131, PRK15131, mannose-6-phosphate isomerase; Provisional.	7.29773e-109
NZ_CP015098.1\|WP_062927218.1\|3639817_3641182_-\|phosphomannomutase/phosphoglucomutase	gnl\|CDD\|236557	PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed.	0
NZ_CP015098.1\|WP_062927217.1\|3638274_3639402_-\|mannose-6-phosphate-isomerase	gnl\|CDD\|378434	pfam10432, bact-PGI_C, Bacterial phospho-glucose isomerase C-terminal SIS domain. This is the C-terminal SIS domain of a bacterial phospho-glucose isomerase EC:5.3.1.9 protein which is similar to eukaryote homologs to the extent that the sequence includes the cluster of threonines and serines that forms the sugar phosphate-binding site in conventional PGI. This domain contributes a good proportion of the active catalytic site residues. This PGI uses the same catalytic mechanisms for both glucose ring-opening and isomerisation for the interconversion of glucose 6-phosphate to fructose 6-phosphate. It is associated with family SIS, pfam01380.	5.72164e-16

>NZ_CP015098.1|WP_062927217.1|3638274_3639402_-|mannose-6-phosphate-isomerase
MLDESLLDSPEGLAEADHRGLLRGAAEAGARVRTAARHAAEAGVGDLKPDGRPRAVLIAGPGAAATHAADLIGTLAGAGSPVTRLAPTGVAPAAGALRWELPGWVGSVDLLLITTPDGTEPGLSLLAEQAYRRGCTVVAVAPARTPLADALAGVHGLFVPVATAPYDQEEPLAASAPGVLWALLTPLLALLDRTGVLAAPPDALGKVADRLDRVAERCGPAIATYSNAAKTLAAELADALPIVWTEGISAGPAGRRFAAALAELSGTPAVVAELPEALAAHGALLAGPLAASADPDDFFRDRVEEPPALHARVVLLRDRPIGGLTAAPGARDLALSHDTPISELEPEAGGELETLAELIAITDFAAVYLALASRV
>NZ_CP015098.1|WP_062927216.1|3637068_3638220_-|mannose-6-phosphate-isomerase,-class-I
MDRLDNTIRPYAWGSPTAIPQLLGVEPTGEPQAEMWMGAHPGAPSRTDRGTLVEVVGADPEKELGPAAVAKFGPRLPFLLKLLAAGAPLSLQVHPDLVQAKEGYADEERRGIPVDAPHRNYKDANHKPELICALTEFDGLCGFRAPLEAAALLDDLGVDSLKPYVDLLHAHPEDAALREVLTAILSADPDEMARTVAEAAAACDRLGGAYAPYADIAHHYPGDPGVIAAMLLNHVRLQPGEALYLGAGIPHAYLNGLGVEIMANSDNVLRCGLTPKHVDVPELLRIVRFRAGDPGVLRPEASPDGEEVYETPIDEFRLSRYVLPEAGTARDLTRTTPQILLCTAGAVRAGEHDLTPGRSVFVPAGERVEVSGTGTVFRATVVA
>NZ_CP015098.1|WP_062927215.1|3635937_3636912_-|cation-diffusion-facilitator-family-transporter
MSASGGTKAIVAALAANLAIAVAKFVAFIFSNSSSMLAESVHSLADSGNQALLLVGGKKAKREATPQHPFGYGRERYIYAFLVSIVLFSVGGMFALYEGYEKIKHPHELTNWYWPVGVLVFAIIAETFSFRTAIKESNVLRGERSWKEFVRHAKAPELPVVLLEDLGALVGLILALGGVGLALLTGDSVWDGIGTLCIGILLILIALVLAAETKSLLLGESAGTEETQKIEAALVDGETVTRIIHMRTLHLGPDELLVAAKIAVQHDDTATEIASAIDAAESRIRDAVPIARVIYLEPDIYSEAEAAKGSDPEASPGGPAPAAH
>NZ_CP015098.1|WP_062927214.1|3634157_3635615_-|adenosylhomocysteinase
MTTVENRQDFKVADLSLAAFGRKEITLAEHEMPGLMAIRKEYAATQPLAGARVTGSLHMTVQTAVLIETLVALGAQVRWASCNIFSTQDHAAAAIAVGPNGTVDNPQGVPVFAWKGETLEEYWWCTEQALTWPDSPTGGPNMILDDGGDATLLVHKGVEYEKDGKVPSPDTAESDEHRVILELLNRTITDGSQKWTQLASEIRGVTEETTTGVHRLYEMQRDGTLLFPAINVNDAVTKSKFDNKYGCRHSLIDGINRATDVLIGGKTAVVFGYGDVGKGCAESLRGQGARVIVTEIDPICALQAAMDGYQVATLEDVVDKADIFITTTGNKDIIMAADMAKMKHQAIVGNIGHFDNEIDMAGLARIPGIVKDEVKPQVHTWTFPDGKVIIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPDEYPTGVYVLPKHLDEKVARLHLDALGVKLTTLRPEQAEYIGVKVEGPFKPDHYRY
>NZ_CP015098.1|WP_062927213.1|3633408_3634023_-|hypothetical-protein
MPRGRYSLHDPHDHTLLADEHFQCAPGPSGWRYVSQLTTPAGDHHGSVDLTLDELGRPLRLELHAAAWQVRGAALDGVTWVRTDPTGTEATEGNVRAHAFTGTSPAFLVATARLLRLTPSATATRVRLVAFTDPVLAPRTVDQSWALLKSEAHATDNGPLTVDEYQVTALDTGEQHTVHITGDVVLAAPGIELEDLESPPSVFT
>NZ_CP015098.1|WP_062927212.1|3632323_3633370_+|RDD-family-protein
MSELVTGEAVTLELRPARLPSRALAVLLDLVAAMAVYVAVTIALVVSTASLDEAAQTALSIATFVLVLVGAPIAVETLSHGRSLGKMACGLRVVRDDGGPIRFRHALVRGLIGVIEILMTLGTVACIASFVSARGRRLGDVFAGTLVVRERIPVTRTGFVPPPPPWLAGRFSALDLSAVPDGLWLAVRQYLTRMQQLDPQVGWSMADRLASDLAERTGAPVPQGVPPAAYLAAVVQERQAREARRAFGNDAAQATASASASAQATASAPAPAPAPAPAPAPATNGAVGTGETPAAGNAQAVGSAPAASARPVGAPEVVSEPSDAGWRPAESPGASAGERPGTGFVPPG
>NZ_CP015098.1|WP_062927211.1|3631187_3632195_-|stage-II-sporulation-protein-M
MDLDVFVSAHRAEWDRLEALLRRQRRLNGTEADELVTLYQRTATHLSLIQSSAPDPQLTGRLSQLVARARSAVTGTRRASWRDVTRFLAHGFPAAVYTSRHWWVPTALLSTAVAALLGWWIGTHPEVQASIAAPSELRELTRPGGQYETYYSSHPAASFAAQVWTNNAWAAALCLILGVFLGLPVLWILFQNMLNLGIGIGLMSSAGRLDTFLGLVLPHGLLELTAVFVAAGTGLRLGWTLIDPGPRTRRTALAEEGRAAIGMAIGLALVLFVSGAIEGFVTPSGLPTWARIAIGVAAEVAFLTYVYVLGSRAARAGETGDVEAAERSATVPTAA
>NZ_CP015098.1|WP_062927210.1|3624057_3625368_+|DUF58-domain-containing-protein
MALTGRTALLAALGSLPVGIWEPSWTGILAVNAPLAVACACDFALAAPVRRLGLTRSGDTSVRLGDTADVTLTITNPSRRPLRARLRDAWPPSSWQPGTETTASRHRLTVPPGERRRVTTRLRPTRRGDRQADRVTIRSYGPLGLFSRQGTHRAPWTVRVLPPFTSRKHLPSKLARLRELDGRTSVLTRGEGTEFDSLREYVPGDDTRSIDWRATARRTTVAVRTWRPERDRHILLVLDTGRTSAGRVGDAPRLDASMDAALLLAALASRAGDRVDLLAYDRKVRALVQGRTAGDVLPALVNTMAMLEPELVETDARGLTATTLRTSPRRSLIVLLTTLDAAPIEEGLLPVLTQLTQRHTVLLASVADPHITEMATARGNADAVYEAAAAAQAQSERHRTAEQLRRHGVTVVDATPDNLAPALADAYLALKTAGRL
>NZ_CP015098.1|WP_107308327.1|3623068_3624058_+|MoxR-family-ATPase
MDPTTDNAGQTGDPGTARDALEALRAEIAKAVVGQDPAVTGLVVALLCRGHVLLEGVPGVAKTLLVRALASALELDTKRVQFTPDLMPSDVTGSLVYDTRSAEFSFQPGPVFTNLLLADEINRTPPKTQSSLLEAMEERQVTVDGTPRPLPDPFLVAATQNPVEYEGTYPLPEAQLDRFLLKLTIPLPSRQDEIDVLTRHAEGFNPRDLKAAGVRPVAGPADLEAARAAVAKTTISPEITAYVVDLCRATRESPSLTLGVSPRGATALLATARAWAWLTGRDYVIPDDVKALALPTLRHRVQLRPEAEMEGVTADSVINAILAHVPVPR
>NZ_CP015098.1|WP_062927208.1|3621866_3623069_+|DUF4350-domain-containing-protein
MTTEATLTSTSASPTARQVWTRARGIALALVVLLAGAVAIAVIRSDARHGELDPRSADPGGSRAIAELLADRGVDTRVVTTLDEAATAAGPDTTLLVATPDLLTPTQQTRLHNAFADSRGRTVLVASGSASIERLAPGVTADPATSLDSTLSPDCALPAAQRAGTADTGGVRYTTTHLGADACYPSERLATLLRIPDGTGDGDTIALGAPDILLNDHLDEQGNASLALQLLGSRPHLVWYLPSLSDASATNPDDERSFFDLLPSGWLWGTLQLFIAAALAALWRARRLGPLVPEKLPVAIRASETAEGRARLYRKTDARDRAADALRSTTRTRLAPLIGVPVTQAHTPEALLPALSAHLHGDGNGQDQQSLLFGPPPSDDAALIALADRLDALEREVRRP
>NZ_CP015098.1|WP_062927218.1|3639817_3641182_-|phosphomannomutase/phosphoglucomutase
MAADLSQVVKAYDVRGVVPDQWDESLAELFGAAFVRVTGASAITTGHDMRPSSPGLSRAFARGAAALGADVTEIGLCSTDQLYYASGALNLPGAMFTASHNPAQYNGIKMCRSGAAPVGQDTGLAQIRELVEGWSESGAPQPAAKAGTITGRDTLSDYAAHLRSLVDLTSIRPLKVVVDAGNGMGGHTVPEVFTGLPLTLVPMYFELDGTFPNHEANPLDPANLVDLQKRVREESADLGLAFDGDADRCFVVDERGEPVSPSAITALVASRELARHGGRGTIIHNLITSWSVPEVVEENGGSPVRTRVGHSFIKAEMARTGAIFGGEHSAHYYFRDFWNADTGMLAALHVLAALGGQAGPLSALVAQYDRYAGSGEINSTVADQQASLAAIRSAYGTREGITLDELDGLTVSSADWWFNVRPSNTEPLLRLNAEARDAETMARVRDEVLGIIRS
>NZ_CP015098.1|WP_030844668.1|3643030_3643453_-|DUF3499-domain-containing-protein
MESRRGPLKSAVPSNVVSPVRRCSRTACGRPAVATLTYVYADSTAVLGPLATYAEPHCYDLCAEHSERLTAPRGWEVVRLLDGSAPARPSGDDLEALANAVREAARPQERAAGAGGGGRGADPREVARRGHLRVLRSPDN
>NZ_CP015098.1|WP_107308329.1|3643747_3644203_+|metallopeptidase-family-protein
MDKPVPPRAAAPGPRRRDRHGRGMRGPIAPPQVPLAASRAEAFADLVQDSVERLERRWPQLADVDFLVLEVPRLDGPGQAWNDEAVPLGGTISAREGRPARVVVYRRPVEIRTKGRDERAALVHEVVVEQVAELLGLTPETVDPRYGEDQG
>NZ_CP015098.1|WP_062927221.1|3644225_3645758_-|hypothetical-protein
MNRTTLSLIAGTTALAAVTGFAALSAPDTPGTDTAAKAAAQLPVERTSLLCPAPSTSDLAETSYTSFTPVTKGTGSGGKAELRAATEESADAPADGKDEGAGKDGGKSGKDKTAEPVLTPKEPGKPVTVDSSGGDAPALVGTADGRFAPGWTVQETTEVAAGTGRGLQGVNCTAPETDFWFPGVSTDADRTDYVHLTNPDDSAAVVDIELYGKDGALKSAVGEGITVQPHSSEPVLLSTLTDERQTNLTVHVNVRSGRVGAAVQALDDKLGGDWLAASADPSGSLVLPGIPKDATSVRLVAFTPADADADLKVRLASPSGLITPAGHETVHVKGGMTTAVDLGDVTRGEAGSLVLTPTDRSVPVVAALRVVRGKGDKQETAFIPASRPVGTRATSADNSGKGSTLSLTAPNAAATVKVTASAGSEGGTPVSKTYTIKAGTTQDIEPPVPGGLKGTYALTVEPVSGGPVYGARTLAASEGGVPAFTVQTLPDDRGTVAVPEADEDLSVLQK
>NZ_CP015098.1|WP_079128979.1|3645754_3649417_-|glycosyltransferase
MSVHSHSAAHHDAAATPEFPRHVVTAVLVSHDGARWLPDALAGLLGQERPVQYAMGADTGSSDASAQLVTDALGADRVLHLARRTGFGQAVEECGRTAPVLTPDELPYLKRPSGWDPVTRSWRDDAYDLPELPHGEPVQWLWLLHDDCAPDPDALAQLLRVVENEYELGRDDVAVVGPKLRGWYDRRQLLEVGVSIANSGRRWTGLDRREQDQGQHDHVRTVLSVSTAGMLVRRDVFEQLGGFDRHLPLMRDDVDLCWRAHAAGYRVLVAPEAVVRHAEASSRERRTVDCMGRAAASPHKVDKAGAVYTLLVNSRTAVLPWVMLRIVLGTLLRTVAYLVGKVPGQAVDEIRGLLGTLLRPERILAGRRGRGAPRIDKGELRALFPPPGATVRVTVEQVASSLVGRSDPEVAAGAGRHGGAVESGPGGDDADFLEIEQFARLKRIARKPGPVLFLVLLLVSLVACRQLLGGGALAGGALLPAPADSAELWSRYLDAWHPVGTGGTSSAPPYVALVAMLASLLFGSTGLAVTVLLVGSVPLAGVAAYFASRPLVESRLLRAWAAVVYAFLPAATGALAGGRIGTAVLAVLLPLIARAGIAAGGLTNSAGTRGSWRATWAYALLLTITTAFTPIVWPIALLLGIGLLVLRRSDITAYGLRFLAQLGTPLLLLAPWSLTLLPFGFLKEAGLDYGASAASALDLLGASPGGPGTVSGLMLLGIVLAALAALVRSERQSGIWTAWAVALTGFVFAVLSNGSTWAGPATLVYGIALLAAAALGADGARARVAEQSFGWRQPVAVLIAFASAAGPLLIAAGWMIRGADGPLERRDPTQVPAFVAEESGTRDQARTLVLDSDSGARVVYMLVRGSGARLGDGEIAAADGENSRLDKVVANLVAGSGADQADQLGGFAVRYVLVHQGAPREVTRVLDATPGLTRLSQQDGGALWRVNREVARATITPDSGSAGAPQPVAAGPVDIHTTIPTGADGRLLRLADSASDGWSATLDGKPLTRTTVDGWAQGFELPAAGGRLDVTYDDPIGHTAWLWAQGLLAVVLVVLALPGRRRDIDDDLPDEPAVPAQAVAGEGRRARRLRAQAEAETEEAAGPEEFPPPQPEQPPAAVPQQQNYGEWDNAGYQSGEYANYGDQYQNAQYPADAYGQQYPADPYQGGQYDPYAYGGQGQNQPYDQQGYDQAYQQGYGTPYDPAQQHHPHGTGSERPDGSQQ
>NZ_CP015098.1|WP_010034659.1|3649579_3649843_-|WhiB-family-transcriptional-regulator
MTETVQQLLVDDADEELGWQERALCAQTDPESFFPEKGGSTREAKKVCLACEVRSECLEYALANDERFGIWGGLSERERRRLKKAAV
>NZ_CP015098.1|WP_062927223.1|3650500_3651007_+|cysteine-dioxygenase-family-protein
MNSDSDLQIAGDILEVTHLLQTPREHPATVAEFAGLARSLAEDRSQWEHLVRYDATSRWYHRLRTGPGYEVWLLSWVPGQGSGLHDHGRSSGVLTVLDGTLTERTERGTRALRAGAQRVFAPGYVHEVVNDALEPAVSLHVYYPGLTEMPMHTAPHCEARALPGAVTA
>NZ_CP015098.1|WP_062927224.1|3651042_3652002_+|2-phospho-L-lactate-transferase
MRIVVLAGGIGGARFLRGLKRAVPDADITVIGNTGDDIHLFGLKVCPDLDTVMYTLGGGINEEQGWGRADETFHLKEELAAYGVGPEWFGLGDRDFATHIVRTQMIGAGYPLSAVTQALCDRWKPGVRLIPMSDDRIETHVAVEIDGETRAIHFQEYWVRMRASVPARAVVPVGADQAKPAPGVLEAIAEADVILFPPSNPVVSIGTILAVPGIREAIADAGVPVVGLSPIVGDAPVRGMADKVLAAVGVESTATAVAEHYGSGLLDGWLVDSVDAAAVEQVEAAGIRCRAVPLMMSDTDATARMAQEALALAEEVRGA
>NZ_CP015098.1|WP_062927225.1|3651998_3653318_+|coenzyme-F420-0:L-glutamate-ligase
MSGETQGAAGYRVWALGGIPEVTTGDDLAKLIAAAEPGLTDGDVLLVTSKIVSKAEGRIVRAADREAAIDAETVRVVARRGALRIVENRQGLIMAAAGVDASNTPSGTVLLLPEDPDASARAIRDGLRDALGVDVGVVVTDTFGRPWRAGLTDVAIGAAGVRVLDDLRGGTDAYGNPLSATVVATADELAAAGDLVKGKAAGLPVAVVRGLSHLVAQGDDGEGARAMVRGARDDMFRLGTSEAVRLAVTQRRTVRSFTDEPVDAGAVRRAVAAAVTAPAPHHTTPWRFVLLESEASRTRLLDAMRDAWIADLRRDGKSEESIAKRVRRGDVLRNAPYLVVPCLVMDGSHTYGDPRRDGAEREMFVVAAGAGVQNFLVALAGERLGSAWVSSTMFCRDVVREVLELPADWDPMGAVAVGHPAEEPRARPGRDAGAFIEVR
>NZ_CP015098.1|WP_062927226.1|3653381_3654383_+|hypothetical-protein
MAGRFAQRPTRTTVRGGQVAVPPGVPRQATGPGRVRAWMPDGPLDIGLVLGPLRRGPGDPTFRATPDGSVWRTSLTPAGPGTLRVCAYGGGVRGEAWGPGAEWLLEGLPELLGAADDPSAFVPRHRLLASARHRRPGLRLTRSRLVLESLIPSILEQKVTTDEAYRAWRLLVRKFGEPAPGPASARMYVMPAPRTWALIPSWEWHRAGVDDKRASTILRAVRVAARLEQAVGMEPGAARARLELVPGVGPWTSAETVQRSHGAADEVTVGDLHLPGIVGWALAGDRDADDAVMLELLEPYAGQRHRAARLILLSGRVPARRAPKMPRWDIGQL

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Crispr_ID: NZ_CP015098_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_7

4287122-4287280

Orphan

Consensus_repeat	Method
GCACGACGCATCGCCATCGACCC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP015098_7

>merge|NZ_CP015098|7|4287122-4287280|CRISPRCasFinder
GCACGACGCATCGCCATCGACCCAGCACGGGTCAGTCGGCCCGGGACAGCACGACGCATCGCCATCGGCCCGGCACGGGGCCCCCGCGGTGGCACCTCACGACGCACCCGCGTCGGCACAGCACGACGTGCCCACCCCACGCCGCCCCGCCCCCGAGCC

>NZ_CP015098|7|7|4287122-4287280|CRISPRCasFinder
GCACGACGCATCGCCATCGACCC	AGCACGGGTCAGTCGGCCCGGGACA
GCACGACGCATCGCCATCGGCCC	GGCACGGGGCCCCCGCGGTGGCACC
TCACGACGCACCCGCGTCGGCAC	AGCACGACGTGCCCACC
CCACGCCGCCCCGCCCCCGAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062931514.1\|4272883_4273567_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP015098.1\|WP_062927708.1\|4279219_4280512_+\|S53-family-peptidase	unknown	unknown	gnl\|CDD\|173788
NZ_CP015098.1\|WP_062927718.1\|4291895_4292567_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP015098.1\|WP_079129379.1\|4290654_4291899_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP015098.1\|WP_062927719.1\|4299117_4300383_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP015098.1\|WP_062931513.1\|4271711_4272713_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|381602
NZ_CP015098.1\|WP_062927716.1\|4289851_4290631_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|372253
NZ_CP015098.1\|WP_033314308.1\|4298446_4298995_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP015098.1\|WP_003991275.1\|4280990_4281299_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062927709.1\|4281508_4282336_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062927720.1\|4300394_4302062_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP015098.1\|WP_062927707.1\|4278390_4278936_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062927712.1\|4285210_4286620_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|315512
NZ_CP015098.1\|WP_062927714.1\|4288305_4288842_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP015098.1\|WP_062927705.1\|4270766_4271465_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239480
NZ_CP015098.1\|WP_062927715.1\|4288934_4289855_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213235
NZ_CP015098.1\|WP_062927722.1\|4303991_4304756_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP015098.1\|WP_062927710.1\|4282325_4283651_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062927721.1\|4302236_4303616_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP015098.1\|WP_062927711.1\|4283647_4285204_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062931514.1\|4272883_4273567_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	4.42636e-05
NZ_CP015098.1\|WP_062927712.1\|4285210_4286620_+\|ATP-binding-protein	gnl\|CDD\|315512	pfam12846, AAA_10, AAA-like domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	5.9702e-11
NZ_CP015098.1\|WP_062927705.1\|4270766_4271465_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239480	cd03385, PAP2_BcrC_like, PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.	2.8139e-21
NZ_CP015098.1\|WP_062927719.1\|4299117_4300383_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.16652e-66
NZ_CP015098.1\|WP_062931513.1\|4271711_4272713_-\|C40-family-peptidase	gnl\|CDD\|381602	cd13399, Slt35-like, Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).	2.17486e-31
NZ_CP015098.1\|WP_062927716.1\|4289851_4290631_+\|ABC-transporter-permease	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	6.40747e-05
NZ_CP015098.1\|WP_033314308.1\|4298446_4298995_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.50195e-18
NZ_CP015098.1\|WP_062927720.1\|4300394_4302062_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	6.58144e-50
NZ_CP015098.1\|WP_062927708.1\|4279219_4280512_+\|S53-family-peptidase	gnl\|CDD\|173788	cd04056, Peptidases_S53, Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.	4.04272e-61
NZ_CP015098.1\|WP_062927714.1\|4288305_4288842_-\|N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.79495e-10
NZ_CP015098.1\|WP_062927718.1\|4291895_4292567_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	6.7015e-69
NZ_CP015098.1\|WP_062927715.1\|4288934_4289855_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	6.65162e-90
NZ_CP015098.1\|WP_062927722.1\|4303991_4304756_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.49728e-10
NZ_CP015098.1\|WP_062927721.1\|4302236_4303616_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	2.27158e-103
NZ_CP015098.1\|WP_079129379.1\|4290654_4291899_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	4.44213e-36

>NZ_CP015098.1|WP_062927712.1|4285210_4286620_+|ATP-binding-protein
MRDPLSVLTDAFTSFLFGKVETTRLPVRTSTGQAQAVYLPTAAPGLGDSGVIIGREVYSGKGYIYDPFQLYGQQLPAPHWLVLGESGNGKSALEKTYVLRQLRFRDRQVVVLDAQGEDGVGEWNLIAQELGITPIRLDPMAALDMGIRLNPLDPAITTTGQLALLRTIIEVAMGHGLDERSGFALKVAHAYVNETVVDRQPVLTDIVEQLRHPKPESAEAMNVAIDDVRAWGLDVALVLDRLVDGDLRGMFDGPTTVGIDLDAPLIVFDLSHIDRNSIAMPILMAIVGVWLEHTWIRPDRKKRIFLVEEAWHIINSPFVAQLFQRLLKFGRRLGLSFVAVVHHLSDVVDGAAAKEAAAILKMASTRTIYAQKADEARATGRVLGLPRWAVEIIPTLTPGIAVWDVNGNVQVVKHLVTETERSLVFTDRAMTQSSAELADDALHAAELEAEERAAAFVEHHLGDSESTVA
>NZ_CP015098.1|WP_062927711.1|4283647_4285204_+|hypothetical-protein
MTTESHVSHPVTPRRTYLIGRARPNAIIGRNRETGEIALIVVGAFLGMMCGLLVPVLSLRIVLLAGFPMLALAAVYVPYKHRTFYKWFEINRSYKRTLKQGTTYRSTAIEAGTRLDGKEIEVGPPPGIGRITWLAAPFGPDEIAVLLHADRKTVTAAIEIEGPGVGLRDSEDQEALVDRFGTLLKHVANGDGFVTRLQMLARTLPADPDAHAKDVAVRGDGKALPWLQESYDQLQSMVSTSSEQHRAYLVACMHYTRDLAAEANAMARAARAHGGKVDRDAGLAVVMARELTDICSRLQEADIRVRQPLGQGRLASLIHSMYDPDHPIDHIQAMTKRNAWPAELDAMEPTYLQAKTRESSTRAPWCHATAWVKEWPMTPVGVNFLAPLLVHTPDVIRTVAVTMDLEPTEVAIERMLTEKTNDEAEASRAAKMNRTVDPRDIAAHSRLDQRGEDLASGAAGVNLVGYITVSSRNPDALARDKRTIRASAGKSYLKLEWCDREHHRAFVNTLPFATGIRR
>NZ_CP015098.1|WP_062927710.1|4282325_4283651_+|hypothetical-protein
MPVRHHVLKLGAAVAAVQTATVLLATRAFAAPPPSPSPSNNACDLLRGEARDICEGDTGSGSGSGTSRLDPTSTLDPLSSLAKGCADAASWTVDKLSEAVKETANVDFTNPKFLQQYAVVFAASTILTLLLWLLAVAKRAVRGVPLTTALSEAIGFLWLTVLASAFTPLILYTVVSATDGITEVLAKATGDQTDAFFGTFSEALKKGEDIGGGPIMLIVVSLVSILAAGVLWLELVIRAALLYVGALLGTVVYAGLVDKNLWGHVRRWAGIMIAVILIKPVIVIVLGLAGALSADDGPNAFSAVVSGLAIILLAIFASAMIYRFVPGFGDEIAGSRNNRLMQGAESKAAAVISSPATLVAQGIKTHSSRADHNGGGSQSSAPRPSNPASGGVAAHSARTSNGGGGSVPSAAPAPRSSSPVNTPHASNTRNSSTNRTGGEGR
>NZ_CP015098.1|WP_062927709.1|4281508_4282336_+|hypothetical-protein
MSLGDDHESSGGYGGTGQTRTRLPDSGDAFGDPRRRSSSRSLVTVVGVVVLLIAAIAFANRGDGDTSSSTDSSSGKPGTSATAPSGKQPVKSKTGDIATGYAHTEQGAQSAATNYGIALGSADMYNLDKRHAIVNTVYAPDVAAAQLPEFDQVYSRESFLEKIGLTKDGAAPSGQTFVSRVVPVGTKVTSYNNSTASVALWYTSLFGLSGEGSKNPVTESWYTTTYQLKWVDGDWKVTGFTQKDGPVPVGRDQRASTAEDMSKAVEEYGGFTYAR
>NZ_CP015098.1|WP_003991275.1|4280990_4281299_+|hypothetical-protein
MLFAADKGDINTIIGGIAPDWGPFGSLGNEAKVMIEVVMAVAILLCLGIAIWGAAKQRIGATALRDTFSAEQGKGLIIAGLTGVFIIGSLGTLFTIVYGMAV
>NZ_CP015098.1|WP_062927708.1|4279219_4280512_+|S53-family-peptidase
MRTTPHNTTSTRRRWRRTLSAVTATAALLLTGLATAAHAQAATDTSTSKVTWTRSCALPRHQGEMACNALRVTGGVTAFQKQHGTSTRTAEATSPSGYGPTDLRSAYGLTSAAANNGSGRTIAIVDAYDDPKAESDLAAYRSHYGLPACTTANGCFKKVSQTGSTTALPTADSGWAGEISLDLDMASAVCPNCHITLVEAKSASMANLGTAVNEAVALGATYVSNSYGGGESSSDASYDSAYFNHPGVAITVSAGDAGYGAEYPAASKYVTAVGGTSLTTSSATRGWTESVWRTSSTEGTGSGCSAYDTKPAWQTDTGCTRRMIADVSAVADPATGVSVYDTYGADGLGWVTYGGTSASAPIIAGVYALAGTPPTGSYPAEFPYANTSALNDVTSGSNGSCTTSYFCTARTGYDGPTGLGTPEGLGAFTG
>NZ_CP015098.1|WP_062927707.1|4278390_4278936_+|hypothetical-protein
MTVENTLRDLRRLATVCPPPPHPACPESGESTQSTQVVPPGHRELMRTYGVGCFDEFLWLFADGAPNSNLDITESTRRLRSIFRDRALPRLSQVFDEFHCTPDQLVQWGVTDNADMLAWIATGDPENWPTVIIQAGQLGAVVSPASSTATVLHLLTGALRVPFFPGDFPTGQPEFSADPYA
>NZ_CP015098.1|WP_062931514.1|4272883_4273567_-|trypsin-like-peptidase-domain-containing-protein
MLLALLAVSVATADDGGGPLGVTVTARDARVGVLVPAAGGRHFCTASVVDAPHRNLIVTAAHCLGGAGGLVFVPGYRDGRAPYGEWKVRRRFLARGWAEERDEDSDVGFAAVAPRGGEEVQDAVGGNRFVTGTATGATAVTVTGYPNARETAVSCTAEPHAFGRTQQRIACPGFSGGTSGSPWVNGDGQVVGVLGGHDQGGTAPGVSYSVVPGAEAQRLYEQAAGDS
>NZ_CP015098.1|WP_062931513.1|4271711_4272713_-|C40-family-peptidase
MRKAWIVASVAISSALAFVMLLVVGVYLVAGNLVNGVSGGAKSLAKGSVPAAYAALVQKWGNLCPAISPALLAAQLYQESGFNPRAQSHAAAQGIAQFIPGTWASHGIDGDGDGDRDVWDPKDAIPSAASYDCELASYVKKVGGNPTENMLAAYNAGAYAVIKYGGVPPYSETRNYVKRITALSESFAAPVGRVDPSEQAAGAIEYAQKKLGTLYLWGGTGTAEQGGRFDCSGLTQAAYASVGIKLPRVANDQYNAGPHPSRDELLPGDLVFFSDDLTNSRAIRHVGIYVGGGYMIDAPRTGAVIRFDPIDTPDYFGATRVTEDGAKALPTTV
>NZ_CP015098.1|WP_062927705.1|4270766_4271465_-|phosphatase-PAP2-family-protein
MAGLADSGSNPDVDLLYDINGLAKDAPAWFDRVMEYVGEYGLLLAIVLLVVWCWWTVRRRGDEDAASTVAALVWAPLAAGVAVLVNVPIRGFVERPRPFLDHQGLDVLVQGKTDYSFVSDHATIVMALAVGLFVANRKFGLIGLVLALFGGFIRVYMGVHYPTDVVGGFALGTAVALLLSPLAMALLTPVMKAVERSPRVGWLVRSRGRASGEDTVIPEARSERASERDLAA
>NZ_CP015098.1|WP_062927714.1|4288305_4288842_-|N-acetyltransferase
MSYVIRSVRADEWPAVKELRLAALRDPVAHLAFLETYEEAAARPEVYWQERTARAAEGADKAQQIIAEGPDGRWVATLTVLVEEPGTTDWAGFPVERKQGHVVGVFVRPEERGSGLTEVLFDAALEWSWGRGLERVRLFVHEENGRAQRFYRRVGFLPSGVTVPLGDAGELEFVLERE
>NZ_CP015098.1|WP_062927715.1|4288934_4289855_+|ATP-binding-cassette-domain-containing-protein
MLTAHELTKRYGDRTVVTDLSFTVHPGTVTGFLGPNGAGKSTTMRMLLGLDTPTRGHATVGGRSYAAHPAPLTEVGALLEARSVHPGRTAYHHLLALAHTHGIPRARVEHVLGLTGLTDVAHRRVKGFSLGMGQRLGIAAALLGDPATLILDEPVNGLDPEGVLWIRNLLKSLAADGRTVLVSSHLMSEMALTAEHLVIIGRGRLLADTTVTDFVRDSGAGTTKVVTPEATALADLLTAPGVDITTDTPGTLHIRGTDAQHIGRTAAAHGIPLHELTPGAASLEEAFMDLTRDALEYPATLEGAAA
>NZ_CP015098.1|WP_062927716.1|4289851_4290631_+|ABC-transporter-permease
MTTATLPYRVTPVRVLRSEWHKLWTLRSTWITLAVTSLLTAAMGAGLGAAYDGSGEGGMDPVMFALLGTQFATINLGVLGILATAGEYSTGQIRATMTAVPRRLPVLWSKAAVLAAVVLPLTLATNLLTFPLAQSFLNGTDLSASLGDPGVLRALAGNAAGLTLLAVLALGIGALLRSVPMAIGAFIGLVMILPEVLAMLPYAFVDDAVRHFPGKALEALTTAQPQPGAASPGASLLAMLLWTATVLTVAAVVLRRKDV
>NZ_CP015098.1|WP_079129379.1|4290654_4291899_+|two-component-sensor-histidine-kinase
MDPVTEDRAPEPLTEYAQRLTHKVRAFDRRHPLLWDLHFTGFWVTAALIDYAGGGWRYNAHHLDVPGWLLLALSLGLSAPLLWRRTHPGTVLAAMAPFAFVNAWTGAALQAALLQLVLVYHLALRRPLRNLWWATALVIAPVLVSALRHGEGTWDQQIGSHLMSITVAVLIGATVRTRRDYTEALEDRARRLETERDQQAQLAAAAERARIAREMHDIIGHNLSVITGLADGGRYAAAKSPERAAQALDAIATTSRQALTELRRLLDVLREEERQQADLAPQPGLADLDRLLDGVRSAGLPVSTTTHGEPTLPPGRQLTVYRVIQEALTNTLKHGGPHATAEIELSYEEKSAVTVTITDTGNGSRTAGTSRDGRGLPGMRERTALYGGTLEAGPRPHPERGWRVRLSLPEESPQ
>NZ_CP015098.1|WP_062927718.1|4291895_4292567_+|response-regulator-transcription-factor
MTTVLIADDQPLQRFGSRMLLESQDDMTVVGEAANGSEAVRLAAELHPDVVLMDIRMPGLDGIEATRRITAAGDRTRILIVTTFDLDEYAYAGLRAGASGFLVKDAQPEELLAGIRAVATGDAVVAPSLTRRLLDAYVHHLPAGPSSEALPQDDPRLASLTDREREILTVIGKGWTNTEIATRLHLAESTVKTHVGRILAKTGSRDRIQAVILAYDTKLVQSS
>NZ_CP015098.1|WP_033314308.1|4298446_4298995_-|MarR-family-transcriptional-regulator
MGDTAGPSEPTLEEQIAAYQREFQDLDPQVEQIVSALSRLNRRMNVAYGRQTSALGISNAEWEVLKALVLSGAPYRLGPSDLAKRLGLTPAAMTHRIDRMVAESLVTRERDESNRVRVIVELTSEGREKWLEAMRLASVFEEDLLQDLSPDERTALGEVLTRLLRRVEHAQPDAGGRLTDLD
>NZ_CP015098.1|WP_062927719.1|4299117_4300383_+|MFS-transporter
MGAAMRRIHVGNALSAFGLGFTVPYLYVYVAQVRGLGAMTAGLVLAVFAVAALVVLPFAGRAIVRRGPLPVLLAALLTAALGALSLGIASSAAAVLVSASLLGAGQAVMQPALATMIVDCSSADTRSRAFAMQFFLQNLGLGVGGLIGGHLVDTTSAASFTVLFAIEAAMFLLLVVVMVTVRMPRAPRIEDAPKALGGGSWKQLLGNRAMVQLCVLGFVLFFACYGQFESGLSAYGVEAAGISTSALGTALAANTLVIVIAQFAVLRFVERRRRSRVIAAVGLIWAVAWAVAGYAGLGHGSQEMATAAFVSTYALFGLGEAMLSPTVAPLVADLAPEGMAGQYNSAFALVKQLALAVGPAVGGPLGASLHAPYIVAFLVFSLGITVLAVRLGRQLTDVQDQPWLGKSRVVARGGAPVSADV
>NZ_CP015098.1|WP_062927720.1|4300394_4302062_-|SpoIIE-family-protein-phosphatase
MNFTRWSARLPGTQRRAAARTEQTASPDRRGEGSVPAARAEQLTDESPSVPAVDELRVREVLDRVPSLVALVHGPDHRIAYVNDAYTTAFGVRPLGERAREALPELDGLGLFPLLDQVQRSGKPRTVKSRKAPDGRSYTFTCTPVAQGDGEGGSEGRGVLVFATDVTDHAEAAERLRASERRQRETAVTLQRSLLPQELEQPDDLRIAATYHPGGTEAAVGGDWYDVITLGGGRTALVIGDVMGRGVRAAAVMGQLRTAVRAYARLDLPPHEILQLLDGLAAEIDANQIATCAYAIHDPNEGKLIYSSAGHLPILVRDENGTVLRAEEPTGPPLGTGGWMHTSGSIPLAPGSTAVLYTDGLVERRDADLDEGIAALERALAGATGTPQVVCDRLVRSAGVTPDHDDDVAVLVLQHPARSGPDSELFRNAALELLGGVEAAPRARAFASGVLTSWRFPADLHDLGVLATSELVANSLQHGSPPMRLRLRRTDRRLIIEVTDGDDHLPRRRRAEPGDESGRGIAIVATIASNWGCRRTPGGGKAVWCEFALPRTQTT
>NZ_CP015098.1|WP_062927721.1|4302236_4303616_-|NAD(P)/FAD-dependent-oxidoreductase
MVKERARILVVGGGYVGMYTALRLQRRLKRELDRGEVEITVVTPDPYMTYQPFLPEAAAGAISPRHVVVPLRRVLDRCRVLIGEATAVDHAKRTATITTLATDEEGTGGQRLPYDELVLAPGSVSRTLPIPGLADHGIGFKTVEEAIGLRNHVIEQMDIASSTRDPAIRDAALTFVFVGGGFAGVEALGELEDMARYAARYYHNVQPDDMKWILVEASDRILPEVGEEMGRYTVTELRRRNIDVRLQTRLESCADRVAVLSDGARFPTRTVVWTAGVKPHPVLAATDLPRNGRGRLTCTPELSVEGTTHAWAAGDAAAVPDVTAGEPGRACAPNAQHAVRQAKVLADNIVHSLRGEPLETYEHAYAGSVASLGLHKGVAHVYGRRLKGYPAWFMHRAYHLSRVPTFNRKARVLAEWALAGLFKREIVSLGSLEHPRAEFELAAGGKPSQDPPHNPKGSS
>NZ_CP015098.1|WP_062927722.1|4303991_4304756_+|helix-turn-helix-transcriptional-regulator
MHVQDSHWSPASAVAAGGMTMSAAGNGRDVSRTTPLRVDAQRNLEHVLRAAREVFGELGYGAPMEDVARRARVGVGTVYRRFPSKDVLVRRIAEEETSRLTDQARAALGQEDEPWSALSRFLRTSVASGAGRLLPPQVLRVSVEDGAGGPRVPQQRTQPGGTELRLVPDQPVAVAAVPAVASEDDAGTSALLEVVGQLVDRARAAGELRADVSVSDVLLVIATAAPSLPDAAQQAAASARLLDILLEGLRSRPA

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Crispr_ID: NZ_CP015098_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_8

4405368-4405488

Orphan

Consensus_repeat	Method
CTGCTGGTTCTGGCCGACTCCGCCCGGGAAGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_8

>merge|NZ_CP015098|8|4405368-4405488|CRISPRCasFinder
CTGCTGGTTCTGGCCGACTCCGCCCGGGAAGCCGTCCCCGCCGGGGAATCCGTTGCCCTGCCCGCCCCGGGCGTTGCCGTTGCCGTTCTGCTGGTTCTGGCCGCCTCCGCCCGGGAAGCCG

>NZ_CP015098|8|8|4405368-4405488|CRISPRCasFinder
CTGCTGGTTCTGGCCGACTCCGCCCGGGAAGCCG	TCCCCGCCGGGGAATCCGTTGCCCTGCCCGCCCCGGGCGTTGCCGTTGCCGTT
CTGCTGGTTCTGGCCGCCTCCGCCCGGGAAGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062927808.1\|4412606_4413083_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP015098.1\|WP_062927798.1\|4400612_4401335_-\|GAF-and-ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP015098.1\|WP_079129020.1\|4410992_4411865_-\|DUF2797-domain-containing-protein	unknown	unknown	gnl\|CDD\|378524
NZ_CP015098.1\|WP_062927803.1\|4407142_4408525_-\|bifunctional-glycosyltransferase-family-2/GtrA-family-protein	unknown	unknown	gnl\|CDD\|133031
NZ_CP015098.1\|WP_079129019.1\|4401479_4401905_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|366782
NZ_CP015098.1\|WP_062927793.1\|4395513_4395711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062927811.1\|4416948_4417362_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_107308350.1\|4396428_4398960_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP015098.1\|WP_062927810.1\|4415732_4416671_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP015098.1\|WP_062927807.1\|4412110_4412509_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062931521.1\|4403311_4404808_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
NZ_CP015098.1\|WP_062927805.1\|4410143_4410884_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP015098.1\|WP_062927794.1\|4395926_4396415_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP015098.1\|WP_062927796.1\|4399049_4399871_+\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP015098.1\|WP_159029595.1\|4413378_4414623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_079129021.1\|4415092_4415659_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP015098.1\|WP_062927797.1\|4399853_4400555_-\|GAF-and-ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|198080
NZ_CP015098.1\|WP_062927801.1\|4402387_4403167_-\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|367243
NZ_CP015098.1\|WP_062927804.1\|4408539_4410147_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|274368
NZ_CP015098.1\|WP_062927800.1\|4401915_4402386_+\|PPOX-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274679

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062927808.1\|4412606_4413083_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.83135e-16
NZ_CP015098.1\|WP_062927798.1\|4400612_4401335_-\|GAF-and-ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	1.26766e-14
NZ_CP015098.1\|WP_079129020.1\|4410992_4411865_-\|DUF2797-domain-containing-protein	gnl\|CDD\|378524	pfam10977, DUF2797, Protein of unknown function (DUF2797). This family of proteins has no known function.	2.89985e-45
NZ_CP015098.1\|WP_062927803.1\|4407142_4408525_-\|bifunctional-glycosyltransferase-family-2/GtrA-family-protein	gnl\|CDD\|133031	cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.	7.66998e-81
NZ_CP015098.1\|WP_079129019.1\|4401479_4401905_+\|STAS-domain-containing-protein	gnl\|CDD\|366782	pfam01740, STAS, STAS domain. The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.	2.39927e-13
NZ_CP015098.1\|WP_107308350.1\|4396428_4398960_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	8.53932e-58
NZ_CP015098.1\|WP_062931521.1\|4403311_4404808_-\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	9.14e-68
NZ_CP015098.1\|WP_062927805.1\|4410143_4410884_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.03854e-83
NZ_CP015098.1\|WP_062927794.1\|4395926_4396415_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.82334e-17
NZ_CP015098.1\|WP_062927796.1\|4399049_4399871_+\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	6.45008e-55
NZ_CP015098.1\|WP_062927810.1\|4415732_4416671_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	3.69371e-24
NZ_CP015098.1\|WP_079129021.1\|4415092_4415659_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.90962e-20
NZ_CP015098.1\|WP_062927797.1\|4399853_4400555_-\|GAF-and-ANTAR-domain-containing-protein	gnl\|CDD\|198080	smart01012, ANTAR, ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	5.72624e-13
NZ_CP015098.1\|WP_062927801.1\|4402387_4403167_-\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	gnl\|CDD\|367243	pfam02909, TetR_C, Tetracyclin repressor, C-terminal all-alpha domain.	1.81138e-13
NZ_CP015098.1\|WP_062927804.1\|4408539_4410147_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	1.34521e-61
NZ_CP015098.1\|WP_062927800.1\|4401915_4402386_+\|PPOX-class-F420-dependent-oxidoreductase	gnl\|CDD\|274679	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes. [Unknown function, Enzymes of unknown specificity].	6.31346e-40

>NZ_CP015098.1|WP_062931521.1|4403311_4404808_-|MFS-transporter
MTTSPQETAPPQTAHGSHPQRWLILGVVCLAQLTVLLDNTILNVAIPSLTREMDATTADVQWMMNAYALVQSGLLLTAGNAADRYGRKLLLMSGLAVFGLGSLAAGLSQSPGQLIAARAGMGIGGALLMTTILAVVVQIFDDQERVKAIALWSTVSSLGFAAGPLIGGVMLNHFWWGAIFLINIPVALLGLVAVAALVPESKHKAGDRPDLLGAVLSTIGMTAVVYAIITGPEHGWTSAQVLVSALIGVVVLGLFVLWELRTEHPMLDMHFFRNQKFVGAVAGAILVAFGMTGSLFLLTQHLQFVLGYEPLDAGLRTAPLALTVVALNFTGAGAKLVLKAGTPAAIALGMTLVSAGLAAIALLGGHGYEGMLLGLVVMGAGVALSMPAMANAIMGAIPPEKAGVGAGINGTLAEFGNGLGVAVLGAVLNSRFASLVAVSAASLPAALTAADSAEEKARISDAFASGLETSQLVGAVAVLAGGLVAAALLRRAERAESA
>NZ_CP015098.1|WP_062927801.1|4402387_4403167_-|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein
MTKAARQDQPRSSVWLEGTAHRRRGGGQPSGLDRARIIEVTVRLLDAEGLAKFSMRRLAGELNVTAMSVYWYVDTKDDLLELALDEVMGGMRLPDPDAGEDWRDQVRALAREYRTLLVRHPWVSALVGVFLNIGPNSLAFSRVVQRVVRRTGLPAKRMTSTISAVFQFVYGYGTLEGHLASRATAGGMSVDEYFQQTLNAVTAAPQAADVLKESREIMAARGGDTVAEMLERDFEFALELLIAGIEAMVTREREAAAER
>NZ_CP015098.1|WP_062927800.1|4401915_4402386_+|PPOX-class-F420-dependent-oxidoreductase
MAPNIATNTRVSLDELLDFVRPRHHAILLTRRTDGGPQGSPLTCGVDDSGRIVVSTYPERAKTRNAKRDPRVSLLVLSDDWNGPWVQIDGTAEVVDSPDSVEPLVEYYRNIAGEHPDWDEYRAAMLKQGKSIIRITPERWGPVATGGFPARLVEGE
>NZ_CP015098.1|WP_079129019.1|4401479_4401905_+|STAS-domain-containing-protein
MVEWRHGSGSGLTGNRTNVCQVSAVTFFTNPTEPRDLPGRVHLTMPAEIDFCNAAELLPLVLSAAGARRDRLEVLVLDLSTTSFMDSQGVRLVNDVRRRLPPGAVLRLVARPEGITARVLELTGLRRDVPVYDDLAEALAS
>NZ_CP015098.1|WP_062927798.1|4400612_4401335_-|GAF-and-ANTAR-domain-containing-protein
MPKRFVVAASEFPDLPRFPAGAELAEALTVASQQLHETLTPHSALRTAVRLAVHLMPGAEHAGISVIERGDKLRTLAWTDEVVRSAESRHTGREQHGLWDQLWNSPVARITDSEADDGWDVLAALGLRSALSLRLRADRRRLTVLTAYARKPGVFDEEATRVGRLFSAHVSIALDSATVREQLTEAMHTRDLIGQATGILMERQGIDASAAFESLVRASQRENVKLRDLARRIVGAHNTP
>NZ_CP015098.1|WP_062927797.1|4399853_4400555_-|GAF-and-ANTAR-domain-containing-protein
MSSEASDTLDQAMVRSSGLDTLLRDLTDRAVQEVPGAEACSITVRRGGRLLTLAGSDGMPSGLDLRQYENGSGPCVDAAETGEEQYAPDLAEESRWPSYTQYALSTGVRCVLAVPVAVEGESGAALNYYGVRAGALDTGQDAARAFAARAGDAIDVALRIERRRQSAADVRTALLSRSVIDQAVGILMARERIDARIALERLRRVSQDRNVKLRDLCGQLVARVSAPDSHRRK
>NZ_CP015098.1|WP_062927796.1|4399049_4399871_+|YceI-family-protein
MGLTARIRTRDGWAVSHAVVTVADTTGAQVLRAEADAEGFVRDATPMEPGAYTVIVTAVGYAPAASSVIVTASGRAEAGTVTLARQGGTELPPPGPWTVDPVHSSVAAMAQHLGISSVHGRFTEFSGSIEIAPDDVTESRVQAVIRAASIDTGNGMRDGHLKSPDFLDVERFPEITFRSTGLTAAGSDRWTVHGELGMRGVVRPVDLDLAYLGTGPDPWGGTRAAFRATTELHREDFAMNYNQVLQAGIAAVGTTLKVELDIQAVQGESLPAV
>NZ_CP015098.1|WP_107308350.1|4396428_4398960_+|MFS-transporter
MATTTPAGVRAHAKHGGGSHGSSGDGAPMTHRQIMEALTGLLLGMFVAILSSTIVSNALPRIISDLGGGQSAYTWVVTASLLTMTASTPLWGKLADLFSKKLLIQFALVVFVLGSAAAGMSQNPGMLITFRAVQGIGMGGLSALAQIIMAAMISPRERGRYNGYLGATFATAMVGGPLVGGVITDTDWLGWRWCFYVGVPFAVIALIVLQKTLHLPVVKRKVKVDWAGAFFITAAVCLLLVWVTFAGDKYDWVSWQTYAMVGGSLVLLALFVLVEAKASEPIIPLRLFRNRTIALASLASLFVGVAMFAGTVFFSQYFQLARDKSPTMSGVMTIPMIAGLFISSTVSGQVITRTGRWKGWLVGGGVLVTAGLGLLGTIRYDTEYWHIAIFMALLGLGIGMMMQNLVLCTQNQVEPGDLGAASSTVTFFRSLGGAVGVSALGAVLGTRITDYVKDGLADLGPKGAALGHAGTGGGGIPDLSTMPAPIRTVVESAYGHGVADVFLYSAPLALLALLVSLFIKEVPLKTKGGLAQAADTETPAVVPAEVAVEAAEAEKAAPSWAETEAAGGTGPEGTQRLAAVATAVRAEEASGGVPVRGFVRGNESAPVPQAAVTLISLAGRQLGRSVAQADGSYAVDAPGSGSYVLIASADGFQPQASTVVVNGEPVAYDILLSGTSGLTGLVRAAGSGEPVKDAMVIVTDVRGDLLANGTTGEQGEFSFAELVPGAVTVAVNAAGYRPRALPVEVGGTGVTRVEIDLDPGARVQGVVRAPHGPLADARVTLVDQAGNVVGSATTGTDGAYAFTDLDGGEYTVIATGYPPVATALTVTGVGTDAHDIELAHPGE
>NZ_CP015098.1|WP_062927794.1|4395926_4396415_+|MarR-family-transcriptional-regulator
MAEQAQYEELVRQFSAFGAVKRELGRIMPAECPGGSAAVLTLLGRHGDMRMSKLAELLAVDMSVTSRHVAHVVDRGWIERSPDPADKRSRILRLTPAGHTQLDELSRRTTEVLAERLSDWSDEDVGRLTSLMARLRESFDCRPGTRAAPAAFDQTTRTPAST
>NZ_CP015098.1|WP_062927793.1|4395513_4395711_-|hypothetical-protein
MANNQAPQGNHDPAGSTQMFRAFVDEAPQGRQAAAPSSSGPRIGLILGVVVAVAVIAAVAWLALA
>NZ_CP015098.1|WP_062927803.1|4407142_4408525_-|bifunctional-glycosyltransferase-family-2/GtrA-family-protein
MRTDSSPGTLPAREHLPAAPAGTPVLDVVVPVYNEEKDLQPCVRRLHEHLDRTFPYAFRITIADNASTDTTPQVARQLAAQIPEVTTFRLEQKGRGRALRAVWSASDAPVLAYMDVDLSTDLNALLPLVAPLISGHSDLAIGSRLARSSRVVRGPKREFISRAYNLILRGSLQARFSDAQCGFKAIRRDVARILLPLVEDTGWFFDTEMLVLAERAGLRIHEVPVDWVDDPDSTVHIVKTATDDLKGVWRVGRALATGSLPLDRLARPFGDDPRDRDIEDVPTGLARQLVGFCVVGVLSTLFYLLLYSGFRVFTGSQTANALALLVSAVANTAANRRLTFGVRGRGGAVRHQAQGLVVFGIGLALTSGSLAALNAATSEPAHSTELAVLVAANLAATVLRFLLFRAWVFPDRREDAPAPAAAPSCDTTPCRAGDVADSWRDATVQLLPVRPHDTDARDLR
>NZ_CP015098.1|WP_062927804.1|4408539_4410147_-|HAMP-domain-containing-histidine-kinase
MSGRRRPGTQQREGRRWAGKPRTLRTRLVVASVVLIAVVCAVIGTVTTLALKSHLYEQLDGQLGAAASRAAQSPPREPGTDGDAGPAGRKKESLTDFVTRGPQPGGTVVAKVEGGRITDSAYGVTDDNYQVSPRTLNSAQTAALASLPQSPGDPRTVGIPGLGEYRVMFKSGDKGSYYVAIPTADVDNTISTLILVELSVTGAGLAAAGLAGHVLVGVATRPLRRVAATAARVSELPLHTGEVNLSERVPDSETDPHTEVGRVGAALNRMLDHVHGALHARQQSETRVRQFVADASHELRTPLASIRGYAELTRRGREQVGPDTRHALGRIESEAGRMTLLVEDLLLLARLDAGRPLQFGQTDLVPLVVDTISDARAAGQDHNWRLDLPDDPALVSADAARLQQVLINLLGNARTHTPPGTTVTARVQRRGTWLCVDVEDNGQGIPAALLPHVFERFARGDSARSRATGSTGLGLAIVRAVTSAHGGAVTVDSVPGRTVFTVRLPALPLQPQPDMSRQQHSQARHSVTTSAQQGA
>NZ_CP015098.1|WP_062927805.1|4410143_4410884_-|response-regulator-transcription-factor
MTTTSPQGRTELLRPDGSPVRVLVVDDEMSISELLSMALRYEGWQIRSAGDGTGALQAARDFRPDAVVLDMMLPDMDGLAVLGRLRRELPDVPVLFLTAKDALEDRIAGLTAGGDDYVTKPFSLEEVVARLRGLIRRSGAADRRSESVLVVGDLTLDEDSHEVTRAGDGIHLTATEFELLRFLMRNPRRVLSKAQILDRVWSYDFGGQANVVELYISYLRRKIDAGREPMIHTRRGAGYLIKPAAS
>NZ_CP015098.1|WP_079129020.1|4410992_4411865_-|DUF2797-domain-containing-protein
MTQAWKCSGLRWSADGPVLVWDGGRPSALTRGRRVAFGVAEGGVRTCVGARGHTCPVGAAVPGRSTGARCEDCARLDRAHSVAADTIADDPRPYHVYLAWFGPGMVKVGITAQARGSARLLEQGAVCFSWLGLGPLMAARRTEELLRAALRVPDRIPYAEKRAVRAALPETAADRAREVTELYERAVTLPAWPESLVREPLRVVDHVGVFGLGGLPVAVGQVSELVAGGAVGGELAAAAGPDLHLATGGGVVVLDTRLMTGWGLVPAAAGELTVPTRQFKEAAGVQDGLF
>NZ_CP015098.1|WP_062927807.1|4412110_4412509_-|hypothetical-protein
MSAHQYDHGHTVAGWVGTGIASVGAAVAGLGVITVSGVLIAGGLAIGVVSLLVTWALHLAGWGKGPGLRPRAEWGWRVRDSAAPGGHAECLACRLAGRGRGARAVVPVMPAQRESEPETVAAGVESVRRDRS
>NZ_CP015098.1|WP_062927808.1|4412606_4413083_+|MarR-family-transcriptional-regulator
MPAKPRPAATPEQALSAMDQLIATHLVGQHEIAQQVGLSVTDLTCFAYVIEAGENLPTAGDLAARVHVTTGAVTGILNRLERAGYITRRPDPTDRRRIRVAAQPDAVARVREVYEPYYARLTHLFADYSPDEIAVLHDWFTRASTLAANYLEEHCRPD
>NZ_CP015098.1|WP_159029595.1|4413378_4414623_-|hypothetical-protein
MAALAVATVLLPLVAGCGGGDDGADPTAKGTQAPAGQQGGSKSAGQGSGDFPDRGVIVTASCSVPASNPARVTVTGWDPTTWERTVSRTFTVPAEAVVAEADDVASPLVELCADNFPVAGASEDGPRAVAATRLRQLFDKDFSRMAVVLIDRETEATGVGYVDTSGKLTKLSGGQTEDFGDAPGEENAVFAQDGSAVWFTETDSSDHVRIASRSVAGDHEVTEQAGGDGSYMDGAALALAGDPVRGLFGKEVRVSHDGRKATTFITGQGFTVADVPQRSALFKTDGVKTTGIPYEGDCYPYGWVDDETVLCGPRLGEAKDPERKNSFWTLDTSRLDGTADLPKAALGDPIIPATDRKNTVRAISPDGKQLIFASLQGTRLEFFISAIAPGATPKKIAAPGADKALSVGDVLEWR
>NZ_CP015098.1|WP_079129021.1|4415092_4415659_-|GNAT-family-N-acetyltransferase
MNAPVVLQVAATSASPALVLRPWRMEDVAALVEVSRDPALRQWASSAVDNDADGARWVQAQQLGWAAGDRFGFAVLEAQPGSVREQLLGNVVLKEVAYGKPAAEVGYWTAAHARGLGVAPRALEALTSWAFDTFEADGLERLELLHQVDNLASCRVAQKSRYDFDSVLPAAPPSFPRDGHLHIRRTSA
>NZ_CP015098.1|WP_062927810.1|4415732_4416671_-|MerR-family-transcriptional-regulator
MDGDALYSIGELARRTGLTVKTIRFYSDRGIVAPTDRSPAGYRLYSIDAIARLDLVRTLRELGLDLPTIRKVVDRELSLPEVAAAHAEALAVQIRVLRLRRAVLTAVAERGSTPEETELMHRLAQLSEDERRRLIGDFLDAVFGGLDAAPAFAGVMRSMTPELPDNPEAEQVQAWVELAEMSLDPDFRAAVRRMAEDQAVEQARSGKMGPRRDITAAVRDQAGPALTAGIDPASPQADPIVAAFTAHYAHLLGRPDDVELRRRLATRLESVNDPRRERYLQLLAVVNGWPAPESLAPVFDWSLQALRVRTQQ
>NZ_CP015098.1|WP_062927811.1|4416948_4417362_+|hypothetical-protein
MKNANSSTILFRNTMRITDGHLDGFRHAIAQAVAFTQEHGPQLMVEVFIDEERMLAHSFQLYRDSDAIRAHWRLSDPYIREVMEHCTVQHFEIFGAPDHDIVTALETPDGESFPFAISPRLAGFNRLETPGRGKSPS

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Crispr_ID: NZ_CP015098_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_9

4636352-4636461

Orphan

Consensus_repeat	Method
GCGGCGGGCGGGTAGCCGTAGCCGCCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_9

>merge|NZ_CP015098|9|4636352-4636461|CRISPRCasFinder
GCGGCGGGCGGGTAGCCGTAGCCGCCGGGACGGCCGCCGGGCGGCGGCGAGGCCGGCATGGGCGGGGCGCCGGAGGGTGCGGCGGCCGGCGGGTAGCCGTAGCCGCCGGG

>NZ_CP015098|9|9|4636352-4636461|CRISPRCasFinder
GCGGCGGGCGGGTAGCCGTAGCCGCCGGG	ACGGCCGCCGGGCGGCGGCGAGGCCGGCATGGGCGGGGCGCCGGAGGGTGCG
GCGGCCGGCGGGTAGCCGTAGCCGCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062927996.1\|4641600_4642524_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187552
NZ_CP015098.1\|WP_062927989.1\|4630857_4632330_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|274573
NZ_CP015098.1\|WP_062927986.1\|4626593_4627343_+\|class-E-sortase	unknown	unknown	gnl\|CDD\|320679
NZ_CP015098.1\|WP_062927988.1\|4628660_4630688_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP015098.1\|WP_063827567.1\|4642520_4643348_-\|ScbA-protein	unknown	unknown	gnl\|CDD\|367638
NZ_CP015098.1\|WP_062927999.1\|4646581_4647427_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223560
NZ_CP015098.1\|WP_062927987.1\|4627437_4628469_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NZ_CP015098.1\|WP_062927992.1\|4635503_4636019_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224630
NZ_CP015098.1\|WP_062927995.1\|4640252_4641542_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP015098.1\|WP_062927984.1\|4624757_4625396_+\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|181107
NZ_CP015098.1\|WP_062927994.1\|4637637_4638834_-\|spore-photoproduct-lyase-family-protein	unknown	unknown	gnl\|CDD\|188401
NZ_CP015098.1\|WP_062927985.1\|4625392_4626580_+\|class-E-sortase	unknown	unknown	gnl\|CDD\|320679
NZ_CP015098.1\|WP_079129037.1\|4639359_4640133_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP015098.1\|WP_062928001.1\|4647970_4649104_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|224871
NZ_CP015098.1\|WP_062928000.1\|4647474_4647822_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP015098.1\|WP_174569445.1\|4633806_4635363_-\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP015098.1\|WP_062927997.1\|4643975_4644692_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP015098.1\|WP_037668147.1\|4624563_4624761_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062927998.1\|4644826_4646266_+\|DUF2252-domain-containing-protein	unknown	unknown	gnl\|CDD\|313268
NZ_CP015098.1\|WP_062927990.1\|4632326_4633784_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062927996.1\|4641600_4642524_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187552	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs. Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.84799e-32
NZ_CP015098.1\|WP_062927989.1\|4630857_4632330_-\|penicillin-binding-protein-2	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	2.71475e-89
NZ_CP015098.1\|WP_062927986.1\|4626593_4627343_+\|class-E-sortase	gnl\|CDD\|320679	cd05830, Sortase_E, Sortase domain found in the class E family of sortases. Class E sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Actinobacteria). Genes encoding class A and E sortases are never found in the same organism, and similar to class A sortases, the genes encoding class E sortases are not positioned adjacent to genes encoding potential protein substrates, suggesting a housekeeping sortase function of class E sortases in some high G + C Gram-positive bacteria. Similar to class A sortase, class E sortases are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They recognize an LAXTG sorting signal, instead of the canonical LPXTG motif processed by class A sortases. The prototypical class E sortase from Corynebacterium diphtheria (named Cd-SrtF) is a non-polymerization sortase that is not required for pilus polymerization, and proceeds to complete the assembly process by anchoring the polymer to the cell wall peptidoglycan. Moreover, in Streptomyces coelicolor, one or both of Staphylococcus aureus SrtA homologs may function as class E sortase responsible for the cell wall anchoring of the long chaplin proteins (ChpA-C) containing an LAXTG sorting signal, which presumably mediate aerial hyphae formation. The family also includes some class E sortase homologs from Gram-negative and Archaebacterial species, but the functions of these enzymes are unknown.	5.75767e-42
NZ_CP015098.1\|WP_062927988.1\|4628660_4630688_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.24161e-129
NZ_CP015098.1\|WP_063827567.1\|4642520_4643348_-\|ScbA-protein	gnl\|CDD\|367638	pfam03756, AfsA, A-factor biosynthesis hotdog domain. The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a HotDog domain.	1.4142e-18
NZ_CP015098.1\|WP_062927999.1\|4646581_4647427_+\|hypothetical-protein	gnl\|CDD\|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	0.00136876
NZ_CP015098.1\|WP_062927987.1\|4627437_4628469_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	7.95841e-22
NZ_CP015098.1\|WP_062927992.1\|4635503_4636019_-\|FHA-domain-containing-protein	gnl\|CDD\|224630	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms].	8.36632e-19
NZ_CP015098.1\|WP_062927995.1\|4640252_4641542_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	6.19171e-77
NZ_CP015098.1\|WP_062927984.1\|4624757_4625396_+\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|181107	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II.	8.4013e-142
NZ_CP015098.1\|WP_062927994.1\|4637637_4638834_-\|spore-photoproduct-lyase-family-protein	gnl\|CDD\|188401	TIGR03886, hypothetical_protein_SlinDRAFT_56750, spore photoproduct lyase family protein. This uncharacterized radical SAM domain protein occurs rarely and sporadically in species that include select Alphaproteobacteria and Actinobacteria, and in Deinococcus deserti VCD115. It is a distant but full-length homolog to the Bacillus subtilis spore photoproduct lyase (spl), which monomerizes thymine dimers created as DNA damage by uv radiation.	0
NZ_CP015098.1\|WP_062927985.1\|4625392_4626580_+\|class-E-sortase	gnl\|CDD\|320679	cd05830, Sortase_E, Sortase domain found in the class E family of sortases. Class E sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Actinobacteria). Genes encoding class A and E sortases are never found in the same organism, and similar to class A sortases, the genes encoding class E sortases are not positioned adjacent to genes encoding potential protein substrates, suggesting a housekeeping sortase function of class E sortases in some high G + C Gram-positive bacteria. Similar to class A sortase, class E sortases are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They recognize an LAXTG sorting signal, instead of the canonical LPXTG motif processed by class A sortases. The prototypical class E sortase from Corynebacterium diphtheria (named Cd-SrtF) is a non-polymerization sortase that is not required for pilus polymerization, and proceeds to complete the assembly process by anchoring the polymer to the cell wall peptidoglycan. Moreover, in Streptomyces coelicolor, one or both of Staphylococcus aureus SrtA homologs may function as class E sortase responsible for the cell wall anchoring of the long chaplin proteins (ChpA-C) containing an LAXTG sorting signal, which presumably mediate aerial hyphae formation. The family also includes some class E sortase homologs from Gram-negative and Archaebacterial species, but the functions of these enzymes are unknown.	3.15135e-50
NZ_CP015098.1\|WP_079129037.1\|4639359_4640133_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.78393e-07
NZ_CP015098.1\|WP_062928000.1\|4647474_4647822_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	2.6266e-24
NZ_CP015098.1\|WP_174569445.1\|4633806_4635363_-\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	2.66835e-81
NZ_CP015098.1\|WP_062927997.1\|4643975_4644692_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	6.7593e-15
NZ_CP015098.1\|WP_062928001.1\|4647970_4649104_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|224871	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism].	1.91229e-37
NZ_CP015098.1\|WP_062927998.1\|4644826_4646266_+\|DUF2252-domain-containing-protein	gnl\|CDD\|313268	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.	8.29597e-165
NZ_CP015098.1\|WP_062927990.1\|4632326_4633784_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	3.08682e-80

>NZ_CP015098.1|WP_062927992.1|4635503_4636019_-|FHA-domain-containing-protein
MSELTLTVMRLGFLAVLWLFVIVAVQVIRSDLFGTRVTQRGSRREAGRQQQAAAARQAPPPQRQQAAGGRRGRNAPTKLVVTEGTLTGTTVALQGQTITLGRAHDSTIVLDDDYASSRHARIYPDRDGQWIVEDLGSTNGTYLDRSRLTTPTPIALGAPIRIGKTVIELRK
>NZ_CP015098.1|WP_174569445.1|4633806_4635363_-|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MSLSLRFAAGSHKGMIREGNEDSGYAGPRLLAIADGMGGAAAGEVASSEAISTIVALDDDVPGSDLLTSLGTAVQRANDQLRSMVEDDPQLEGMGTTLTALLWTGQRLGLVHVGDSRAYLLRDGVLTQITQDHTWVQRLVDEGRITEEEATTHPQRSLLMRALGSGDHVEPDLSIREVRAGDRYLICSDGLSGVVSHQTLEDTLASYQGPQETVQNLIELALRGGGPDNITVIIADVLDLDTGDTLAGQLSDTPVVVGAVAENQHQLHDNGIMQTPAGRASGLGRHGHGQGGGGGEFGPPGSGDTTGYIPASGFDYGDDDFAKPRKKGRWLKRSFYGVLALALIGGGLYGGYRWTQTQYYVGAEDEHVALYRGISQDLAWVSLSKVEKDHPEIELKYLPPYQQKQVEATIPEGGLKNAQAKIQELSVQASACKKEAQRREAESQNNSKTGEGEAGGTTGTTPASFTSKATPTPNPSSPSGSPSAPEKSTPPTTTAPTPSPGPSLSEEEQKVVSLCGKQ
>NZ_CP015098.1|WP_062927990.1|4632326_4633784_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MSGTNTSHSPTHHTSTIGAIGAPSRRNTELALLVFAVVIPVFAYANVGLALNDSVPPGLLSYGLGLGLLAGVGHLVVRKFAPYADPLMLPLATLLNGLGLVVIWRLDQSEKLQASRTFVEAAPRQLLYSAMGVALLVVVLIFLKDHRVLQRYTYISMAAALLLLVMPLIPGLSAPTYGAKIWIKIPGLGTLQPGEFAKIALAVFFAGYLMVKRDALALASRRFMGLYLPRGRDLGPILVVWVMSILILVFETDLGTSLLFFGMFVIMLYVATERTSWIVFGLLMSAVGAVGVASFEPHIQTRVQAWLDPMREFELSRAAVQDGIVHSEQAMQALWAFGSGGTLGTGLGQGNSDLIGFAANSDFILATFGEELGLAGVMAILLLYGLIVERGVRTALAARDPFGKLLAIGLSGAFALQVFVVAGGVMGLIPLTGMTLPFVAYGGSSVIANWALIGILLRISDTARRPAPAPAANPDAEMTQVVRPS
>NZ_CP015098.1|WP_062927989.1|4630857_4632330_-|penicillin-binding-protein-2
MNKPLRRIAIFCGLLVLALLIRDNWIQYVQADELRTDKNNRRVTIERYASPRGNIIVGGEPITGSAESSGSDYRFKRTYKDGPMWAPVTGYASQAFGATQLENLEDGILTGNDDRLFFRNTLDMLTGEKQQGGNVVTTLNAAAQKAAYNGLKKQGGKGAVVALEPSTGKILALASYPSYDPSSFAGNSTTTDTPAWQKLQKKNNPNDPMLNRALRETYPPGSTFKVVTAAAALEDGIYTDPDGKTDSPDPWIMKGTTTKLPNEGNIPCKNATLRVALQYSCNTVFGKIGSDLGNDKMLDMAKKFGFDEEQFTPVRANASVFSDNMNPSQTALSSIGQFNTAATPLQMAMVASAVANDGKLMKPYMVDELQSPGLDPIQKTDPEELSQPLSAENAQKLQSMMETVVDKGTGSRAKIDGVKVGGKTGTAQHGVDNSENPYAWFISYAKGEDGSAPVAVAVVVEDDNAVRDDISGGGLAAPIARNVMEAVIKK
>NZ_CP015098.1|WP_062927988.1|4628660_4630688_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase
MEEPRRLGGRYELGQVLGRGGMAEVYLAHDTRLGRTVAVKTLRADLARDPSFQARFRREAQSAASLNHPAIVAVYDTGEDYIDNVSIPYIVMEYVDGSTLRELLHSGRKLLPERSMEMTIGILQALEYSHRAGIVHRDIKPANVMLTRNGQVKVMDFGIARAMGDSGMTMTQTSAVIGTAQYLSPEQAKGEQVDARSDLYSTGCLLYELLTVRPPFVGDSPVAVAYQHVREEPQAPSVFDPEITPEMDAIVLKALVKDPDYRYQSADEMRADIEACLDGQPVAATAAMGAVGYGGYPDDQPTTALRADSGAGATSMLPPMNPDDGGYGYDDRPDRRRGQQRKSNTSTILLVVAGILVLVGAILIGRWAVSGDGGVGNDEVAAPNFIGETKNSAQQLATNSDLKLEFSNKPCDNQAKGKICSQDPVPETQVNKGDTISLVVSTGAPKVTVPSVTGLSVDEAKDKLAGDKYEFKIETKTRTSPEKPGTVLEQNPTTGEEVEKGSTITLTVAKEAEKSTVPDVLGQSCDAAKQQMQASDLVGNCTEVETDDDNQVGKVIQTTPQAGTSVDPNSSVNIQIGKKKQQQKVKVPQVVGQTVGQAKQILAQAGFTTIQFAGGSDQSDNALVVGQNPGPNQEVDDPAGTTIALQTVGGGGGNNNGGNGNGGIFGGLNGSNEDD
>NZ_CP015098.1|WP_062927987.1|4627437_4628469_-|restriction-endonuclease
MINETALLESQTLRGSVLDRTDVLDRVKALSLLPDGMHVTTAMVASYFSVTVEVIRALVHDHRAELEASGYRVLTGTELSDFKQLSGIQSRTRSLALFPRRAVLNIAMLLRDSDVARQVRVYLLDMEYLARTQPVENFVPADAASLDARIDQRITHILGRTVVPLFNALIETSGEHRRELTALRAGVQRIEKRLQQHHTRLQRLEAPREGRPLAGVMAAMDAMNGREFEEHVAELLRRDGCTNVVVQGGGRDRGIDITALTADGRRIVVQCKRFAPHLSITSPEIQKFLGAAKVLHDSEVALFVATCPYTRDALNIAAESGITAVHRGLLEEWSAGAALTVLE
>NZ_CP015098.1|WP_062927986.1|4626593_4627343_+|class-E-sortase
MAATTDTDHEKHTGAASRPPAARRRPGPFAMAVSFFGELLITAGLVLGLFVVYSLWWTNVVADRAAGKQADKVREDWAHGRGGPGALDTRNGIGFLHVPAMRNGEVLVEKGTSNKILNDGVAGYYTDPVKATLPMSGKDGNFSLAAHRDGHGAAFHNIDKIEKGDPIVFETKDKWYVYKTYAILPETSKYNVKVLSPVPMESGRKKPGRYITLTTCTPLYTSTYRYIVWGELERVEKVDADRTPPKELG
>NZ_CP015098.1|WP_062927985.1|4625392_4626580_+|class-E-sortase
MTALRPERESDTSYGQQSYGVSGAFEDWSGAGGYGASPQGEPYPPGPGPGPGPGPGPQPQSGPRHPGQYASYEPVPEEPYLPPVDEETVALRIPEPPTESGDSVAGSAASSGSRRDGSAQGGRAARRKAAKGRHGRHGGAPDPSSAAQADDGGRSRAPLSRVEARRQARARKPGPAVVASRAIGEVFITTGVLMLLFVTYQLWWTNVRAHAQAGKEASSLQNDWASGKRNPGAFEPGQGFAILHIPKLDVVVPIAEGTNSKGVLDRGMVGHYAEGALKTAMPGDKTGNFGLAGHRNTHGEPFRYINKLAPGDPIVVETQDEYFVYKMASILPVTPPSNTSVLNPVPTGSGFTKPGRYITLTTCTPEFTSKYRMIVWGKMVEERPRSKGKPDALVS
>NZ_CP015098.1|WP_062927984.1|4624757_4625396_+|aminodeoxychorismate/anthranilate-synthase-component-II
MSARILVVDNYDSFVFNLVQYLYQLGAECEVLRNDEVSTAHAQDGFDGVLLSPGPGTPEQAGVCVDMVRHCADTGVPVFGVCLGMQSMQVAYGGVVDRAPELLHGKTSLVEHGGGGVFAGLPSPFTATRYHSLAAEPATVPAVLEVTARTHDGIVMGLRHRELPVEGVQFHPESVLTEHGHRMLANWLVECGDQGAVTRSAGLAPVVGRASA
>NZ_CP015098.1|WP_037668147.1|4624563_4624761_+|hypothetical-protein
MGLVPWYDGRDGMYGWIWRHLPGNTWAKAVISLVLVVAVVYVLFQYVFPWAEPLLPFNDVTVDNQ
>NZ_CP015098.1|WP_062927994.1|4637637_4638834_-|spore-photoproduct-lyase-family-protein
MHHPSGTPGDDSDGTLFGLDALAPGPAAPGSTTAPGTDSSFRTSATARRLLSVREIYAEPAAAASPRGRQISARFPDARVIMVDSHWRIPGLHGNEGNVERWVRIKGETLVLGEKKTLTTRPNGRSADWIAPGTSNGCAMACAYCYVPRRKGYANPITVFTNIDRIIAHLARHIARQGPKPEPNQCDPEAWVYDIGENGDCSVDALICHNTADLVHAFRQWPTAKASFATKFVNPDLLALDPRGRTRVRFSLMPPDDARLLDVRTSPVAERIAAAADFLDAGYEVHFNLSPVVVRPGWQDAWAELLVHLDDVLPPRVKQQAAAEVIMLTHNRELHEVNLGWHPRAEETLWRPELQQAKRSENGALNIRYRNGVKAEAVHTLRALIDHHAPWLRVRYAF
>NZ_CP015098.1|WP_079129037.1|4639359_4640133_+|TetR-family-transcriptional-regulator
MTKQDRAVRTRLALIRSAAAQFEAHGYVRAGLARISAGAGVSSGALHFHFADKAAVAEAVEDAAARALREAAVRGHGGDGCALQRLVDVTHHVARLLCADVVVRAGLRLNVEGAAGRVRDLRREWRECVQGLLAEAERRGELAAGVTPQRTGAVVLAATTGIEVLAREDQEWLARPSLTDLWQLLLPSLAAPRLAGAVDPAGSDPTGSGPAGAEPVGSQPVGSQPVGSDPAVSDPAGRGPVARDGQAEAGRAGLALR
>NZ_CP015098.1|WP_062927995.1|4640252_4641542_+|cytochrome-P450
MAQQACPFLSIDPSGQDLYGEISRIRAQGPAVEVELPGGVRAWWITGLELNKRLLAGPETSKDAFQHWPAWINGDISRTWPLAIWVSVRNMVTAYGSDHTRLRKPMAAAFTKRRVDALLPRVQEIVDRALDALERIPEGEVVDLRAAFAAPIPHEVVCELFGVPAGEDGPRAALYRIISRFFDTAISLEDAQANAVDLYGTLTAFLQHKREHPADDLTTALIAARDEGGLSEQELMDNLILLLTAGFETTVNLIDNTVHSLLAHPGQLDLVRTGQVSWEDALEESLRFEAPGAMSGLRYAVEDIEIEPGLTIPKGDPLVVSFAGAGRDPERHGPDAERFDVTRTTSRDHVSFGHGVHHCLGRPLAMAEATVALTSLFTRFPRLALADPAHPPKRLRSIISTGHEELPVLLHGRGPAGPRPEEAEMPAQA
>NZ_CP015098.1|WP_062927996.1|4641600_4642524_-|NAD-dependent-epimerase/dehydratase-family-protein
MTVKVLITGASGFVGSRVADTAKRQPDVHVRLLSRPAPHGPEYVHGDLCAPPSLRGVCADTDVLVHCATRVGGDAETVQAVNDHGTRALVEEAVRAGVRRIVYVSTAAVHGRGPFRGVRPGEVPIAPASPTSRTRAAAERYVLDAGGLVLRPHLVYGEGDRWVIPGLVWLMKELSATLTGCEALQSMIDVDTLGRAVVAAALSPAPGGGVHHVNHPEPVAVADLLAAVSREMGEPGGGAAVDVATALDRVAGSPPALHHLGMLTVDHWFVDDAFWKDLDCPPGEGFAAAFTRAAPWYRAFLDGRRAP
>NZ_CP015098.1|WP_063827567.1|4642520_4643348_-|ScbA-protein
MSDTRFRFTAHWPATHPFFGPVDDRHQDPMIVGETLRQASMVLAHAEFGAPADTHFVMWDLTVSVDPTALLLADAAEPVEFDVVCSEIRRRGHGLRSMRTTMEFRRAGRFVARGTGSTGCTSPRAYRRLRAGRLDSLNTPVPLLAGIAPQAAGRSRAEDVVLAPADRPGVWNLRVDTGHPVLFPRPNDHVPGMVLFEAARQAATAASGLRPFLPGTLTAEFAHYAELHSPCRIETEVFDERPGEVTVRVSGRQDGASVFTASLTSARPARVRSLS
>NZ_CP015098.1|WP_062927997.1|4643975_4644692_+|helix-turn-helix-transcriptional-regulator
MARQERAIRTRRTILEAAAAVFDERGYTSATIGEILDRAGVTKGALYFHFGSKEELAVGVFEEQLAIALPPQSSKLQELVDSGLVMARRLRSEPLVRASVGLALDQGAMDLDRTPAFRMWIDQNTQLLTEAKARGELLQHVDVAETAELLVGSFSGVQLLSQLRCQRQDLERRVVVLFEHFLPSITVPAVLARLDISVDRAERLLAQVRTPEEAAVTVEAPVPSVPSVPSAPSVPSGA
>NZ_CP015098.1|WP_062927998.1|4644826_4646266_+|DUF2252-domain-containing-protein
MTRAGAQDEGGAKAREGAPRRLPEVRGFAEWPAAGSPKDEGKALRKRIPRSAHAMLDLDASRPDAVSAVEESGRGRLPELAPIRVGRMTATPFAFLRGAAGLMAYDLARTPMTGIRAQICGDAHAANFGLYGDARGGLVIDLNDFDETVSGPWEWDLKRLATSLVLAGRVAGADEDECRKAAYDAAGAYRRTMRLLARLPVLDAWNAIADEELVSHADAHDLLGTLERVSEKARHNTSGRFAAKSTETTEDGGRRFVDAPPVLRRVPDAEAAAVAASLEEYAGTLQEDRLPLLARYAVHDVAFRVVGTGSVGTRSYVVLLLDHRGEPLVLQVKEARASALVPHLVKAGFEAPEAGHEGRRVVMGQKRMQVVSDNLLGWTTVDGFPFQVRQFRNRKGSVDPAALAADQMDDYGRMTGALLARAHAHSADPRLIAGYCGKNEELDEAMADFAVAYADRTEADHAELVAGVRAGKVAAEVGV
>NZ_CP015098.1|WP_062927999.1|4646581_4647427_+|hypothetical-protein
MTTPEAEQDGGDAARPEARLERAVRAAEQALIEYEIAVETFRVEVENFSRLHEQKLGPIYARLEELDARILEARAARSGDPADRQRAEEARARLAPIPGVEDLLHGWMDGSGLFPEASAMLTDQPVRPPQRVRPSEEARKLYRDLARKAHPDLAQEEKERARREEFITRVNAAYARGDEAELRELAAEWAKGPELKRGPSRAEELYARLEWLAQRKELLGLLARELEDSAIGHMLQLAPDDPDRLLDEIGQGLLAQVTEREMELAALLGEGEGQGRGESQV
>NZ_CP015098.1|WP_062928000.1|4647474_4647822_+|rhodanese-like-domain-containing-protein
MSFGAGVPTVAVADLKDGDFLLDVREDDEWKAGHAEGALHIPISEFVARYGELTEAAPQDGRVHVICRSGGRSAQVTMYLAQQGVDAVNVDGGMQVWEAAGRPVVTDDGQEGFVL
>NZ_CP015098.1|WP_062928001.1|4647970_4649104_-|acyl-CoA-dehydrogenase-family-protein
MDFTFTEEQQAAAEAARGVFAGVAPDAVPSPALTPGAVAETYDRALWATLADADLLSLLLDPRYGGAGLDAIALCLVLRESARVLARVPLLESSAAAAAVQAYGGEEAKRGLLARAGRGETVLTVAAHGRTGHDPAEQAVTARQDGGTWVLDGVQTAVPWAHDADVTLVPAHTGTGRTVLALVPRGHEGTALAEQFSTSGERLGELRLESARLAARDVIDTDGAWEWLRDLLATGTCALALGLGERVLRMTGDYTGKREQFGFPIATFQAVAVQAADRYIDLRAMEATLWQAAWRISSGAPGPLPAAGDVAVAKIWAAEGVRRVVQTAQHLHGGFGADVDYPLHRYHAWAKHLELSLGPASAHEEALGDLLATHLLA

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Crispr_ID: NZ_CP015098_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_10

4793087-4793187

Orphan

Consensus_repeat	Method
CGCGCGGACGGGAGTCGCCGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_10

>merge|NZ_CP015098|10|4793087-4793187|CRISPRCasFinder
CGCGCGGACGGGAGTCGCCGCCGGCCGGGCGGGCGGTGATCGCCCGGAGGGGGCTGGCTCCGCCGTGGCGGCAGCCGTCGCGCGGACGGGAGTAGCCGCCG

>NZ_CP015098|10|10|4793087-4793187|CRISPRCasFinder
CGCGCGGACGGGAGTCGCCGCCG	GCCGGGCGGGCGGTGATCGCCCGGAGGGGGCTGGCTCCGCCGTGGCGGCAGCCGT
CGCGCGGACGGGAGTAGCCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062928125.1\|4801216_4802176_+\|hydroxylacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|235706
NZ_CP015098.1\|WP_062928127.1\|4803490_4803679_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_079129048.1\|4796347_4797391_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293806
NZ_CP015098.1\|WP_162494385.1\|4794757_4795477_+\|RraA-family-protein	unknown	unknown	gnl\|CDD\|319245
NZ_CP015098.1\|WP_062928116.1\|4789414_4790005_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|225225
NZ_CP015098.1\|WP_062928117.1\|4790054_4791491_+\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|236214
NZ_CP015098.1\|WP_062928111.1\|4784211_4785342_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|173848
NZ_CP015098.1\|WP_062928123.1\|4799689_4800466_+\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|181325
NZ_CP015098.1\|WP_062928120.1\|4795469_4796327_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238617
NZ_CP015098.1\|WP_062928121.1\|4797436_4798348_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP015098.1\|WP_063827569.1\|4787113_4788010_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182137
NZ_CP015098.1\|WP_159029602.1\|4783267_4784218_+\|lactone-biosynthesis-protein,-mmfl	unknown	unknown	gnl\|CDD\|367638
NZ_CP015098.1\|WP_062928113.1\|4786225_4786837_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP015098.1\|WP_062928112.1\|4785338_4786142_+\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
NZ_CP015098.1\|WP_062928124.1\|4800473_4801220_+\|acetoacetate-decarboxylase	unknown	unknown	gnl\|CDD\|179402
NZ_CP015098.1\|WP_062928126.1\|4802177_4803380_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173840
NZ_CP015098.1\|WP_062928122.1\|4798500_4799670_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NZ_CP015098.1\|WP_079129047.1\|4791522_4792455_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|163682
NZ_CP015098.1\|WP_062928109.1\|4782323_4782977_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP015098.1\|WP_062928108.1\|4780916_4782200_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062928125.1\|4801216_4802176_+\|hydroxylacyl-CoA-dehydrogenase	gnl\|CDD\|235706	PRK06129, PRK06129, 3-hydroxyacyl-CoA dehydrogenase; Validated.	1.9008e-75
NZ_CP015098.1\|WP_079129048.1\|4796347_4797391_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293806	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain. Pseudomonas pseudoalcaligenes OPHC2 is a thermostable organophosphorus hydrolase which a broad substrate activity spectrum: it hydrolyzes various phosphotriesters, esters, and a lactone. This subgroup also includes Pseudomonas oleovorans PoOPH which exhibits high lactonase and esterase activities, and latent PTE activity. However, double mutations His250Ile/Ile263Trp switch PoOPH into an efficient and thermostable PTE. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.04024e-50
NZ_CP015098.1\|WP_162494385.1\|4794757_4795477_+\|RraA-family-protein	gnl\|CDD\|319245	cd16841, RraA_family, ribonuclease activity regulator RraA family. RraA protein family is named after the regulator of ribonuclease activity A (RraA), a protein that binds to RNase E and inhibits RNase E endonucleolytic cleavages. Members also include proteins with other functions, like a 4-hydroxy-4-methyl-2-oxoglutarate/4-carboxy-4-hydroxy-2-oxoadipate (HMG/CHA) aldolase from Pseudomonas putida, which catalyzes the last step of the bacterial protocatechuate 4,5-cleavage pathway and the uncharacterized YER010Cp protein from yeast, an organism lacking RNAse E.	1.86164e-38
NZ_CP015098.1\|WP_062928116.1\|4789414_4790005_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|225225	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown].	7.05765e-10
NZ_CP015098.1\|WP_062928117.1\|4790054_4791491_+\|FAD-binding-protein	gnl\|CDD\|236214	PRK08274, PRK08274, FAD-dependent tricarballylate dehydrogenase TcuA.	1.55694e-111
NZ_CP015098.1\|WP_062928111.1\|4784211_4785342_+\|oxidoreductase	gnl\|CDD\|173848	cd01159, NcnH, Naphthocyclinone hydroxylase. Naphthocyclinone is an aromatic polyketide and an antibiotic, which is active against Gram-positive bacteria. Polyketides are secondary metabolites, which have important biological functions such as antitumor, immunosupressive or antibiotic activities. NcnH is a hydroxylase involved in the biosynthesis of naphthocyclinone and possibly other polyketides.	1.69996e-87
NZ_CP015098.1\|WP_062928123.1\|4799689_4800466_+\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|181325	PRK08252, PRK08252, crotonase/enoyl-CoA hydratase family protein.	7.70778e-127
NZ_CP015098.1\|WP_062928120.1\|4795469_4796327_+\|hypothetical-protein	gnl\|CDD\|238617	cd01292, metallo-dependent_hydrolases, Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.	0.00911017
NZ_CP015098.1\|WP_062928121.1\|4797436_4798348_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	6.99767e-33
NZ_CP015098.1\|WP_063827569.1\|4787113_4788010_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182137	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional.	1.8642e-30
NZ_CP015098.1\|WP_159029602.1\|4783267_4784218_+\|lactone-biosynthesis-protein,-mmfl	gnl\|CDD\|367638	pfam03756, AfsA, A-factor biosynthesis hotdog domain. The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a HotDog domain.	1.82566e-14
NZ_CP015098.1\|WP_062928113.1\|4786225_4786837_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.45035e-12
NZ_CP015098.1\|WP_062928112.1\|4785338_4786142_+\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.94511e-35
NZ_CP015098.1\|WP_062928124.1\|4800473_4801220_+\|acetoacetate-decarboxylase	gnl\|CDD\|179402	PRK02265, PRK02265, acetoacetate decarboxylase; Provisional.	9.15652e-152
NZ_CP015098.1\|WP_062928126.1\|4802177_4803380_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173840	cd01151, GCD, Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.	1.99404e-140
NZ_CP015098.1\|WP_062928122.1\|4798500_4799670_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	3.09981e-112
NZ_CP015098.1\|WP_079129047.1\|4791522_4792455_+\|hypothetical-protein	gnl\|CDD\|163682	cd07944, DRE_TIM_HOA_like, 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	1.21972e-55
NZ_CP015098.1\|WP_062928109.1\|4782323_4782977_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.26598e-12
NZ_CP015098.1\|WP_062928108.1\|4780916_4782200_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.50512e-23

>NZ_CP015098.1|WP_079129047.1|4791522_4792455_+|hypothetical-protein
MSMVNIDVTLRDGGYRNGFDFPLGYALKHAKLSVEAGFDWVEIAYRKGSLVPIPGLGLTGRGDDDYIAAMAQEVGPRHIAMILHPKNITRDDLPAMYQAGARLVRIILPAKGYEPGLDYIRQARDIGFTVGVNFARISQWPGRDVVEVAAAATDAGAEFVYLADSNGSLSPVDTAHLTTLTRSVTGGPVGLHAHNNLGLALSNAISAEAAGATWMDSSIQGMGKGPGNLIAEQWLAHLDRTDPEAAARLNLEPVLELADLLLANVPEGSPSLPLPDLVLGRYDLPVEHRKELVGRHGEVLATARTLAGAR
>NZ_CP015098.1|WP_062928117.1|4790054_4791491_+|FAD-binding-protein
MTVPSTPAPYDLVVVGFGAAGLSAALSFAEATEGRETPARIAILERSTEDERGGATRWTGAFLRVDEQRRLDTDWAEHVGRVSGGLADVEYCRTVERESPQTLAFVEKHGVEIDYADFPLPHTFDGGTPSMTPPASPRGGGASIVEHLGAALEKDPRVDIHYETEALRLTTAEDGAVDGVVVRGPDGRTRRLTGRAVVLACGGFQGNTEMLTRYVGDRACDLPLIAPGIANNRGDALRMALELGADTAGQFDGIHAEPVDRRTSKADAVLYGFSCGIFVNGRMQRFFDEGRDTWDNTFEHVGYEIWRNQDQEAYWIADAKTLAIPGIMNSLLSDVPPEQADTLEELADKLGIDAEGLAKTVAEFNAGVGEGEFDPTRLDGKSTVGLTPPKSNWATPLDTAPFIGVPVTAAICFTYGGVRTDLDARVVTPSGTAIPGLYAAGEATGLFYKAYPPATSVLRSLIFGRLAAHHAVQARQSA
>NZ_CP015098.1|WP_062928116.1|4789414_4790005_+|antibiotic-biosynthesis-monooxygenase
MIHVLTLTYLQPRETVTAHLPEHKAWLRDHSDRGRILLSGPRPDGGAVIVTADLDEATVRELIESDPWHKLGIASYDRVAFEGKNASPGVVTAAVPDDSVLLINVATTEDAPATVDALAGAVEHVAATADGFRGSRLLTSVDGDAVINLAAWTDEKRFNAIFDDPGFTGRYQEFAKTVTGAKYRLYRTSRVISPNR
>NZ_CP015098.1|WP_063827569.1|4787113_4788010_+|LysR-family-transcriptional-regulator
MRHLRYFLAVVRSGTVSAAAKELRISQPSLSQQIKRLEQRIGAALFVRSSRGVELTAGGRAFLREIQSIPGQLRSAIAAAAPTPALWSVGVCGGVPAEVLAEVQNGLAGQGAHHVGSRPGPHLRMRSVGAAEQPELLEHGEIVFGIMRLPVTAPHLARAVVWDEPLGVVLPTAHPLASQPSLTWEDLSTQRLLWYDEGCAPGYADAVPAQLTALGWKAVLHPVDQDQQALFVHALQTTRDLVALRPSTAVTDDPQLVWRPLPTASAPRERLAVTALAGSRAARYLGRVAARCGWPYRA
>NZ_CP015098.1|WP_062928113.1|4786225_4786837_+|TetR/AcrR-family-transcriptional-regulator
MAKQERALRTREKVLDAAAEEFAAQGYAKATLNDVARRTGMTKGALYGHFPSKEILAATLLAQSRVAWEEMRRARDVPGAAARAVLEELVLELARRLRSDIRLRAALRLASDLPCLARAAPDLFDDVRRHLVGLVHRAQQEDGIAPYPPDLVVELLLTSLHGTLHASQCDDRYGSAPTREAVWRLLLDALAGDRGGCRGMAGR
>NZ_CP015098.1|WP_062928112.1|4785338_4786142_+|HAD-IB-family-hydrolase
MTRAAAVPVAFFDVDETLVATKSLLDFWDYWVTRQDGPAGTGRGPYDPQRRTAQPAPPATTSTAAAGPPDRSRLNRDYYRRYTGTPESLLQAAARDWYARYRRGERAFVTAGLHALARHRALGHEIVLVSGSLRPVVDAVAADLGATAVRCAEQTVTDDGLLTGEIDRPMIGRAKADAVEAHLAERGARAGDCHAYGDHDSDLPMLRSVGHPVVIGGAPALRHEAARLGWTTLPGDTGPHPARPPVATGRPPRSAAGQRQDQASVSP
>NZ_CP015098.1|WP_062928111.1|4784211_4785342_+|oxidoreductase
MLIDDPERAALRTPLRDLSALTATARRDAPVAEERRALTADAVDALTRAGFPRHFVPGRFGGEAGEFVPLVAGVADAGEACAATAWCAALFAAHGRLAAYLPPEGQREVWADGPDVRIAAAVVPPQGAAVAVDGGWRLDGAWRPASGVDHADWILLASWTDGEEGREHRIFAVPRAQVTVEDTWHSLGLRGTGSNTVRCEGLVVPRHRTYTLDALLRSRPGAARCHTVPYPMVAALMFAAPLLGAARGALRAWTGERLAAERRHPAAHTVLARASARIHAAGLLLTGAAERADRGEITPLAVAENRRDATAAATLCREAVDALFHASGLRAQSPDSAVQRAWRDATAIAAHAALDPDAAARAYAEAVLSPAGGDGP
>NZ_CP015098.1|WP_159029602.1|4783267_4784218_+|lactone-biosynthesis-protein,-mmfl
MARESVHKSASTEVLLTDARHLGEDRFAVAARLPREQFITADHPGEGALDPVLLAEAARQAAIHLSHRFHDIPLGHPFVLGEVAVELDEPLPPSADATLQAHCRRKAGNPRRACLELDATVWAAGRAAGRARVLWEAMEPRRYAVLRKRGAAQPPVVSGPAHAAAAGAASLPPARVGLRRDRDVLLASDTERSGRWWLRLDPGHPVLFDHPSDHIPGMALVEAFRQAAGVAATQGAVGPARVRDIGELTVAYDSFGEPDLPVAITLEPRGAGAREPHDEHARLVHLTATQGDRTLARARIRCGTPGRAHRRTGAAC
>NZ_CP015098.1|WP_062928109.1|4782323_4782977_-|TetR/AcrR-family-transcriptional-regulator
MSEPQPAIAAFAPRKFVTRRGPDPKQERSARTRLLVLTAASELFAEQGFRHTSVKDVADRMKMTKGAVYFHYPSKEALAVAVVEEHYARWPALLEEVLTEGYGPLETAEQMLARAAVSFRDDIVVQAGARLQIERPHIDAELPTPYVDWTELLASLLVAARDEGQVREGVSPEAAARSLVSAFFGAQHISDVLRGRADVVERWTETSELLFHAIRAH
>NZ_CP015098.1|WP_062928108.1|4780916_4782200_+|MFS-transporter
MSESRTLSAETVDEQQAAVPEPATPAPPERAAAARTPTWWVWLAAWPVTAVFVLSNAATPLYVLWQRDIGFSKGTLTVVFAFYIVGLLGSLLVSGVVSDRLGRKPVLLPALALALAACAIFATATTVVALIVARLFTGIAVGAVVSAGMAAVTDVAGPERKRLAALLASCAMVFGAGLGPLLAGLLSETLPAPTVTVFVVEAVLLLTAVLAVLRMPVRRPAARGKGPWVRVPGVPHGNGIHLALGIAVFAPGITATSFVLSLGPTLLTELLGTTSRIVAGAMAFVMFLAATGVQFAVQKLPRRTILTAGAISTTLSMAALIAAVHASSVALLVASALLAGAGQGMGQLGGLSLLNSTVPAQRLAEANAALNVGGYIPAGLLPVSTGYLMDAVGLPTGATLFGTVLMGLAVVGGLVVLSGHRRVSEPA
>NZ_CP015098.1|WP_162494385.1|4794757_4795477_+|RraA-family-protein
MAEGAAASAESTLVPPDVVDRLARLDTASVSDALDSLGIGGVLAGLSARVPGARTAGLAYTVTYRPVDGDGQGFRNAANYLDDVPEGAFVVVDNAGSTDCTNWGSLLTSVARSRGVRGTAVHGSARDIAEIRAAGYPLFSTGATMVSGKNRVELAATGREITVGGVTVRPGDVVVADDNGVLVVPAAHAAEVAGRAERVERTETAIAEAVDTGLRLDEARRRFGYARPWEGPARRTADV
>NZ_CP015098.1|WP_062928120.1|4795469_4796327_+|hypothetical-protein
MCDLARRVVDVHYHAGPDLYRRRLTTGGAGRAYAGIDGWVVIKSHLGCTAASAWEARQEGLPVSGTVVLNDLAGGVHPRVVEQAVYTHGQDSPARLVVHLPTLVGPAHPSRLHRQPFHPLLDTERWRGERVLDDTGQLRRPVREVLRAARDLPVVLATGHCDREETLRVVDEAARLDLPRLLLTHATHPMTGLTPADLTRLADAPGVYVEITALTLLLGHRDAGHLGDVVRAHPRVVFSSDLGQPDQPDPARWLSLSESWFEQAQLTPHQVHAVTALNPAALLAP
>NZ_CP015098.1|WP_079129048.1|4796347_4797391_+|MBL-fold-metallo-hydrolase
MTDPRPLGVSRRALLRGTAATAAYAASSESVHAATGHPASSSPGALNDQSAVRTLTVGDTRLTYVVDGAMELDPTGFLPAVPAAYWRDHPEALTRSGRIAASAGGLLVERGGRRLLIDAGLGANVLSPSLGVSRAGALPHTLRRLRVPPESVDTVAFTHLHTDHTGLGFRTDGERAPRKAFPRADYLVAAAEWEPFWRREIEIGAPSWDGFMVPMSRVLRTFGDGAEIWPGVTALVTPGHSPGHTTYVIAASGGRHVLVFGDAFHTPAQLAHPEWPSGPDTDTGAVLKARRTLLARLLLPRTHAFAFHFGDQAFGRVLRDGTGAARWRPAPARKLLPPPVRISEFPG
>NZ_CP015098.1|WP_062928121.1|4797436_4798348_+|LysR-family-transcriptional-regulator
MELLHLRYFLAVAQELNFSTAARKLHMAASPLSRRIKDLENEVGHRLFDRDTHHVRLTAAGNALLPIARGVLEQVDSIRWRLDETARPQRTTLLLGMPTGVHPDLRERMDALAERVSDRFEIKRWPGGTDRLVDAVCDGRLALTLARLPAGGDPALEQMPVMSERLGAVVPRDRFAGRESVALAELAELAYAGSPTAVTNAYFRGLDQQLAELGIKKRIELGSATFEGISEIVSSGLAFSISMLDSRSPVQNYRLDNVTVLPFSDFHPRMETGLIWRKDRANGGDLQEIVAAARELFTEPLHS
>NZ_CP015098.1|WP_062928122.1|4798500_4799670_+|CoA-transferase
MTDTTDTVAGPLQGVRVIDLSTVVMGPYAAQILGDLGADVIKIESPSDTVRNGHYRTTPGMTPLNLNVNRNKRSVALNLKDDTDRERALRLIDTADVLITNMRPGALHRLGLSYDDIAARNPGLVYAHAQGFRSDSDRAGNAAYDETVQAASGLVDIADRALGEPVYLPTIIGDKVSSLTIAYSVLAALLHRNNTGQGQLIEIPMTDTLIAFNLVEHLAGHTHVPETGPTGFALSMLKGHKAVRTKDGLACVMPYNPHNYRDFFTAAGRPDLAEDPRVSGDAIDSADHEDLAALLETCAPALTTEEWAEVCAKHSIPMAPVLELDRAHDDPYVRDGHLLDTAEHPTEGTVRTIGIPLRFSATPGSIRRLAPVAGQDTEGVLAELDAISR
>NZ_CP015098.1|WP_062928123.1|4799689_4800466_+|crotonase/enoyl-CoA-hydratase-family-protein
MSTPTAPAVRTERIGSALLITLDRPEARNAVNAATATALAAALDELEADPALRVGVLTGEGGTFSAGMDLKAALRGESPEVEGRGFGGLTEARPDKPLIAAVEGYAMGGGFELALACDLIVAAEDARFGLPEVERGLIAAGGGVIRLPGRIPHHLAMELLLTGEPVDGRRAGELGLANRVTSKGQAVAEALRLAERVAENAPLALAAVKRVVRAAEGASDEEAFAFQRGEMKTLMASDDVREGMTAFAERRPARWTGR
>NZ_CP015098.1|WP_062928124.1|4800473_4801220_+|acetoacetate-decarboxylase
MKAADVRQHVTTPLTGPAYAPMVPRFTDREYLNVVYRTDADALRAVVPEPLRIEEPLVRFEIMKMGDVSGYGPYTEAGQAIPVGFEGERGEYLHTMHLDNFPATASGREVSAYPKVIGSPALYVDSGALVGTLDHGSVRVATATMGYKHHELDRAEAEAQITVPTFMLKTIPGYDGLPRVQELVRTRITDVTVKGAWTGPARLQLFQHVLAPLADLPVLEVVSAGHILTDLTLSGVEPVHDYLKGAAS
>NZ_CP015098.1|WP_062928125.1|4801216_4802176_+|hydroxylacyl-CoA-dehydrogenase
MTRAFRTAAVIGAGTIGLSWATLFAAHGLTVRVSDPRPDLAEAVDDALATYAPHLAARGLDVTGLADRVHLAADVSEAVRDADVVQENGPERAGFKKDLFATLAREAPAHALLLSSSSAIPSTAFTGELSDEDAARVLIGHPFNPPHLVPLVEVVPGERTGEDAVLDAVDFYISVGRTPVVERKEIPGFVGNRLQNALSREAAYLVQEGVVTPEDLDQVVINSLGLRWATVGPFLGAHLGGGPGGYRHLVEHIGRSMQQTGAGLGTPSQNKEQKEAQERLIEAVEKAYGSSTYSELTGTRDRRQLAVLAALDSADKEEN
>NZ_CP015098.1|WP_062928126.1|4802177_4803380_+|acyl-CoA-dehydrogenase-family-protein
MTTTVEPLQDQLTADFYAYEALLPDDERKLLLKTRALMRDEVKPLVNENWAEDKFPKELITLFRDSGLAGLPYEGYGEHRPAVSNLLSGTMAMEMARTDASVSTFFGVHNGLAMYSIHSGGDQEQRDRWLPAMAAMDKIGAFAMTEPLGGSDVAGGMRTTAKREGDTWVLNGAKKWIGNATFADHVVVWARDVDDNHVKGFVVGKGTPGFDPVKIEGKIAFRIVENAEITLTDVRVPEADRLQNINSFRDVAEILRATRAGVAWQALGVMVGAYELALDYARERRQFGRPIGGFQLVQDLLVKSLGNITASWGMMVQLARLQDAGIFRDEHSSLAKAFVTSRMREVVAWSREIFGGNGILLEHDIARFFADAEAIYSFEGTREMNTLIVGKSITGESAFV
>NZ_CP015098.1|WP_062928127.1|4803490_4803679_+|hypothetical-protein
MSRRRYVARGVPGGYRIRDNRGRRWWGDLYELCPDDLLTELNGRADQARITALMKRCRAQKR

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Crispr_ID: NZ_CP015098_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_11

4849343-4849435

Orphan

Consensus_repeat	Method
GTCCGGCCGGCCTCACCCGCTCCGCATGCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_11

>merge|NZ_CP015098|11|4849343-4849435|CRISPRCasFinder
GTCCGGCCGGCCTCACCCGCTCCGCATGCCCCCGGGTGTGGCGCGGTCCGGATCACACCGGGTCCGGCCGGCCTCACCCGCTCCGCATGCCCC

>NZ_CP015098|11|11|4849343-4849435|CRISPRCasFinder
GTCCGGCCGGCCTCACCCGCTCCGCATGCCCC	CGGGTGTGGCGCGGTCCGGATCACACCGG
GTCCGGCCGGCCTCACCCGCTCCGCATGCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062928168.1\|4855894_4857256_+\|triacylglycerol-lipase	unknown	unknown	gnl\|CDD\|367570
NZ_CP015098.1\|WP_159029603.1\|4857716_4857989_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062928167.1\|4854083_4855541_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP015098.1\|WP_062928171.1\|4859807_4860698_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|371292
NZ_CP015098.1\|WP_079129050.1\|4845753_4846449_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|163701
NZ_CP015098.1\|WP_062928166.1\|4852425_4853931_+\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NZ_CP015098.1\|WP_062928162.1\|4846454_4847327_+\|SgcJ/EcaC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|274053
NZ_CP015098.1\|WP_062928158.1\|4839282_4839699_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062928154.1\|4834052_4835321_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP015098.1\|WP_062928170.1\|4859013_4859811_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP015098.1\|WP_062928165.1\|4851949_4852411_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238449
NZ_CP015098.1\|WP_062928173.1\|4861663_4863061_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_079129051.1\|4847669_4848452_+\|ThuA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377643
NZ_CP015098.1\|WP_062928159.1\|4839771_4841808_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225177
NZ_CP015098.1\|WP_062928172.1\|4861091_4861667_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062928155.1\|4835400_4836939_-\|alanine:cation-symporter-family-protein	unknown	unknown	gnl\|CDD\|376500
NZ_CP015098.1\|WP_062928157.1\|4837975_4839034_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226355
NZ_CP015098.1\|WP_062928169.1\|4858220_4858688_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP015098.1\|WP_062928156.1\|4837395_4837956_+\|DM13-domain-containing-protein	unknown	unknown	gnl\|CDD\|378440
NZ_CP015098.1\|WP_062928160.1\|4842094_4845070_-\|GH59-galactosidase	unknown	unknown	gnl\|CDD\|366896

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062928168.1\|4855894_4857256_+\|triacylglycerol-lipase	gnl\|CDD\|367570	pfam03583, LIP, Secretory lipase. These lipases are expressed and secreted during the infection cycle of these pathogens. In particular, C. albicans has a large number of different lipases, possibly reflecting broad lipolytic activity, which may contribute to the persistence and virulence of C. albicans in human tissue.	1.65449e-86
NZ_CP015098.1\|WP_062928167.1\|4854083_4855541_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	6.88817e-65
NZ_CP015098.1\|WP_062928171.1\|4859807_4860698_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|371292	pfam10901, DUF2690, Protein of unknown function (DUF2690). This bacterial family of proteins has no known function.	7.59807e-11
NZ_CP015098.1\|WP_079129050.1\|4845753_4846449_+\|hypothetical-protein	gnl\|CDD\|163701	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding). This family contains archaeal and bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation. The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	2.21788e-05
NZ_CP015098.1\|WP_062928166.1\|4852425_4853931_+\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	2.15264e-84
NZ_CP015098.1\|WP_062928162.1\|4846454_4847327_+\|SgcJ/EcaC-family-oxidoreductase	gnl\|CDD\|274053	TIGR02246, hypothetical_protein, conserved hypothetical protein. This family consists of uncharacterized proteins found in a number of genera and species, including Streptomyces, Xanthomonas, Oceanobacillus iheyensis, Caulobacter crescentus CB15, and Xylella fastidiosa. The function is unknown.	5.21918e-42
NZ_CP015098.1\|WP_062928154.1\|4834052_4835321_+\|cation:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	1.5591e-38
NZ_CP015098.1\|WP_062928170.1\|4859013_4859811_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	7.69949e-17
NZ_CP015098.1\|WP_062928165.1\|4851949_4852411_+\|carbonic-anhydrase	gnl\|CDD\|238449	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	7.71575e-30
NZ_CP015098.1\|WP_079129051.1\|4847669_4848452_+\|ThuA-domain-containing-protein	gnl\|CDD\|377643	pfam06283, ThuA, Trehalose utilisation. This family consists of several bacterial ThuA like proteins. ThuA appears to be involved in utilisation of trehalose. The thuA and thuB genes form part of the trehalose/sucrose transport operon thuEFGKAB, which is located on the pSymB megaplasmid. The thuA and thuB genes are induced in vitro by trehalose but not by sucrose and the extent of its induction depends on the concentration of trehalose available in the medium.	1.12531e-111
NZ_CP015098.1\|WP_062928159.1\|4839771_4841808_+\|hypothetical-protein	gnl\|CDD\|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	7.15005e-46
NZ_CP015098.1\|WP_062928155.1\|4835400_4836939_-\|alanine:cation-symporter-family-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	4.90313e-150
NZ_CP015098.1\|WP_062928157.1\|4837975_4839034_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|226355	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms].	1.18254e-15
NZ_CP015098.1\|WP_062928169.1\|4858220_4858688_-\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	1.38782e-06
NZ_CP015098.1\|WP_062928156.1\|4837395_4837956_+\|DM13-domain-containing-protein	gnl\|CDD\|378440	pfam10517, DM13, Electron transfer DM13. The DM13 domain is a component of a novel electron-transfer system potentially involved in oxidative modification of animal cell-surface proteins. It contains a nearly absolutely conserved cysteine, which could be involved in a redox reaction, either as a naked thiol group or through binding a prosthetic group like heme.	2.60529e-36
NZ_CP015098.1\|WP_062928160.1\|4842094_4845070_-\|GH59-galactosidase	gnl\|CDD\|366896	pfam02057, Glyco_hydro_59, Glycosyl hydrolase family 59.	2.08551e-95

>NZ_CP015098.1|WP_079129051.1|4847669_4848452_+|ThuA-domain-containing-protein
MRSINRLTTSVVGAALLLGCFSGPAVSQAKQDGTRVLVFSKTAGFRHGSVSAGIAAVKQLGETGGFSVDVTEDAGAFTADNLGRYDAVVFLSTTGDVLNAAQETAFEGYIRSGGGYVGIHAAADTEYDWAFYGGLVGAYFESHPWWPMRATVHVEDRAHPATANLPTTWKRTDEWYNFRSNPRERVRVLASLDESSYWGGTMNGDHPIAWCQNYQGGRSFYTGVGHSKESFAEPAVRQHLLGGIQWAAGAVEADCRPENG
>NZ_CP015098.1|WP_062928162.1|4846454_4847327_+|SgcJ/EcaC-family-oxidoreductase
MQQPEGTNAPAQDGTQDDARTIRALWAEMARAWAAGDAALFAASFAEDCDFTTVRGDKPPGRTGIAAGHDALFHGPYAGTVLDTRVVAVRFLRPDLATVEAESTITAPDGQPLTATHALAVVERTAEGRWLISAFHNMIPAPRPARQDPDSKDSTVDEPTAARPRLRHLAIVARDPEKLAEFYSSVFAMELFHRDPDGSCFLSDGYLSLALIKHQLDGETPVGFNHFGFHIEDTAATTEALVAAGTPKPAERFTNRPFAEYRAMDPEGNWFDLSEHGFGGPRPPSDSTGA
>NZ_CP015098.1|WP_079129050.1|4845753_4846449_+|hypothetical-protein
MSAVTNASGSGAPDARCGSAGCSATGRTIPPPTVLMDDEALADFIAVAAAEYQLITPEAPLPCFALLLGNAEATTYHVRRVAFGRNARTSDPAALREFRETIVPKFGPAYENEHRGWWMDSHDLLRASREAEALGMDLLGSIHMHPDWHRLGPPSERGETLSERPTPMDRHLFGRTGWPLNIICYLERRDGEFYHALGAWAPPPQHPAEGSEGAECPEVDLRIRTSSLMKA
>NZ_CP015098.1|WP_062928160.1|4842094_4845070_-|GH59-galactosidase
MGPQRRLGWMSLAAATTMALAAGVITAPAAHTADDPVEVVVNGDDVRADNVNGLTYKGLGVLSCNSTSNLLMDYKAEHPGRYWELIRVLFGGKNPLINHVKVEMGSDTNTSTGSDPATMRTADELADASRSPGFQLAADAKTVNPKLKVSILRWVMPRWVQNEWNKGTGSDEMYKWYKETILDAYEKYGYMVDYVNPDTNETHNPDEAFIKWYKKAIMADTDFADPRYGIPAKKRAKAEKAYRSIKIIAADENTTHHFGPSMLSDAELFGMVDAVGYHYNTDDRRDGPVGSDTHLPYTRLATGENKYNEDKEVWYSEGVGSFGYTDYRVNNTEGPNGTSTGIGGVQSALDLANRSVKSYANSKRTHYIFQPAIGSFYEGAQYSHKELVSARDPWSGHLHYDAAIYVMQHFTQFAKTGWENDTNTAGIWRTVPEASYSGVSGTENVDGSNGAPSYMTLADPRKKDFSTIVVNDSDQPKTYRIKAENMRLGSDPTMEIWETRGPDAGEPYDANLKRLVDEIRPGGAGYYTYTVEPRSIVTLTTLDKSRDKATKQRLPESRDRTVLDTDATGKKHNTRDKVLYADDFGYEEEGRVQVGTGDGAHKTSQPYLRSRGNQPRYMVDQTGAWEVAEDASGDNVLYQYMDQSMKDTGAWNRHTPNTTVGDFRWENYRATVDVSFPDPAGGLASLGVRQQKGMAISDAAYNVRIAPTGAWTFYEYGRAVESGTVAASDGYRLAIEAKGATITTYIDGKAVSTYQDPTPQTEGRVKLGSDFHRTAFDNLKVEKIDGYTPYARAQLDNMDSSVTYGGTWSRKASLGDAMDWYRSTSTGTTAGSSFTVPFTGTGIDVIGGNDGTAVLDVYVDGKPIARDAKTAATDKRLATYALRGLPDGAHTARFVLKSGKIVLDAFHAISGDVDGTVDTAPIRDALEKIGRPAQADYTADSWALFASASSAAKAAAAGRQKGLDAIGVEQITDRLEEAHDRLVRKDGSATR
>NZ_CP015098.1|WP_062928159.1|4839771_4841808_+|hypothetical-protein
MTVILLGAGVFVAVTLFAVLLVSRLFRKVEQGRALIVSKLRKVDVTFTGQVVLPVLHKAEVMDISVKAIEITRTGKDGLICQDNIRADIRITFFVRVNKTVEDVIKVAQAVGTARASDRDTLQELFHAKFSEALKTVGKQLDFTDLYTKREELRYRIIEVIGVDLNGYHLEDAAIDYLEQTPVAQLDPANVLDAQGIRKITELTAVEHVRTNEFQRHEEKEITRQNVDAREAILELERRQADAEIKQKREIATVRAREEAETARVVEEERLRAQGAFLATEEKLGVQRENQAREIAVAAKNRERVIAIESERIEKDRLLEVIGRERETQLTRIAAEKEVEAEKRDIAEVIRERVAVDRTVAEQEESIKKLRAVEEAERHRQAVIIAAEAEAQEKLVKDIKAAEAAEQAATHRAAEELTLAEARLKTADLDAQAKLRLAEGIQAEAAAEGLAAVQVRDKEADVTEKAGRAEAAATEARLRAEAEGAQAQALADAAAIGEKLKAEAEGLTQKAAAMAALDDASRGHEEYRLRVQADKEIRLAGLDVQRQVAEAQATVLATGLESADISIVGGESVFFDRLMSSIALGKGVDGFVQHCETAQAMARPWLDGTSSFTDDLGRILGSLSTADVQNLTVSALLMKLMKTGGADSGQLQQLLDRAGELGLADKPLTTLNGSAVHA
>NZ_CP015098.1|WP_062928158.1|4839282_4839699_+|hypothetical-protein
MWMLLSVVTGPPTILLTTALVVVLCFWLLVAAGFTSVGSFDADANLRAWGMGGVPVAVAVSTLTAVAWLLSVGGVLLLAVCAPPCSATGLLRMALPLAALPAAWRLTCLFVRPLHRLFPDEPGPPDRGRARDQVDRAA
>NZ_CP015098.1|WP_062928157.1|4837975_4839034_-|helix-turn-helix-domain-containing-protein
MAELEIPEQYLAGYARMLAEVAATGRRLTRKELASRRALGEQAADAGHGLRALVSAHLTAARSAWPPGPTSADTVLAAVQQATDAFAEGFERAQRQAVRQEEAARREFIDDLLYGRSDLGRLSERAERFGLRLSHAHAVAVAEGPTAYEEGDPVPRQVERALISRFGDRSILLTTKDGRLLCIAPGSQDEVLAHFAKQAHAATDGGRVAIGRPQPGPGGVVHSYEEALGVLELAERLELEDPVLRAADLLVYPVLTRDRQAMAELVVNTLGPLTTARGGAQPLLDTLTAYFDSGCIAAEAARRLTLSVRALTYRLERIHKLTGANPADPAHRYMLQTAVIGARLLDWPTQGL
>NZ_CP015098.1|WP_062928156.1|4837395_4837956_+|DM13-domain-containing-protein
MARRQMVLGRPLVIGVLAMAVVGAGLGLYWFQPWKLWQDETVQEALPSAVAPTVPEAEAPSESPSPAPGPRTLAGGTLISHEHATSGSVKLVRLADGSHVIRLENLDTSNGPDLRVWLTDAPVKEGRAGWHVFDDGAYVSLGKLKGNKGSQNYAVPADVDASRYTSVSIWCDRFDVSFGAAELARS
>NZ_CP015098.1|WP_062928155.1|4835400_4836939_-|alanine:cation-symporter-family-protein
MSLDSVTQNVDEAVSDFFEPIAKWLGDVVFYAVPVGGTDLPLIVAWLVVAGLVFTGWFGFVQVRKFRLALDVVRGKYDEKGSTGEVNHFQALTAAVSGTVGLGNIAGVAVAVSIGGPGATFWMILCGLLGMASKFVEVTLGVKYREVHADGTVSGGPMHYLPKGLKERFGSGGAKLGKVLAVLASIMILFFGLFGGNLFQTNQSYAQISSTFGGEDGFLASSAGAVLFGLVVSALVGLVLLGGIRSIASVTSRLVPAMAAIYIVACLVVILSNVTAVPDAFQTILQGAFEAEGVAGGVLGALIIGFQRAAFSNEAGLGSAPIAHSAVKTKHPASEGLVALLEPFIDTVVICTMTALTIVIANPASWAEARAGESIGGVTITSDAFETVLPWFPAVLTIAVLLFAFSTILTWGYYGLKAWSYLFGKSKASETVFKAVWSLFVILGALMSLDSLISLADSALFLLSVFNIIGLYLLAPVVKRELNSFLEFVRARKAGEIGDDGDEDQESVKTTV
>NZ_CP015098.1|WP_062928154.1|4834052_4835321_+|cation:proton-antiporter
MTLSDVVYVCLGLGALGAAVLPRVVSKRPFSLPMVFLAAGVLIELLPVGVPAVDPVRDRLWVEHTTEVCVIVSLMGAGLAIDRPFGWRRWSSTWRLLGITMPLTVAVVALLAWGLLDWPPAAALLLGAVLAPTDPVLAGEVRVGEPLGTERDEDEVRFSLTSEAGLNDGLAFPFVYAAIALAAAAGTGWSAGWIGSWALTDLLAKCAVGLAVGGGVGWLLGWMFFRVRTSALRLSEHMEGFVALGATFVSYGITEVLHGYGFLAVFVTACVIRAAERSHGYHKVLHEFTEQIERLLTAALLFLLGGYLVAGALSALTLMGAVVAIVVLLVVRPLAGWPAQARTAMGKKERAVVAVFGIRGIGSLFYLSYALGQDSFGGLERELWAVVALTVVLSVVLHGVMATPAIGYLDRWRDGPELGGRS
>NZ_CP015098.1|WP_062928165.1|4851949_4852411_+|carbonic-anhydrase
MQPLIDNARLSGQRPEEFTRLAEGQSPQALFITCSDSRVVPALITRALPGEHFALRTAAVGAVVRRDDLAAVPAVGAWLVHAADEPTCSDITDPTVAEAGQNHVLTQMERLRVYPCIEKRLEAGELQLHGWYREAGTGIVREHDAESGTFEML
>NZ_CP015098.1|WP_062928166.1|4852425_4853931_+|SulP-family-inorganic-anion-transporter
MLSKYPYRRQDFLASVVVFLVAVPLCVGIAVASGVPAELGLITGIVGGLVTGLMPGSSLQVSGPAAGMTVIVFEAVSEFGVGTLGVIVLFAGLLQLAMGILKIGRWFRAISVAVVEGMLCGIGLVIIAGQIYAAAGLKAPESGIGKIVGLPGAFADALGSTEALISLAIGAGTIAVIVAWKKLPKAVQSVPGALAAVVLATLATLALSLPVATVQVDGLLGVIQPPGAEAFGELAGPAVWGTIIAFALIASAESLFSAAAVDRLHDGPRTEYNKEMIAQGAGNTVCGVLGALPMTAVIVRSSANVAAGAKTKASRVLHGVWLLLFAAAMPWALALIPLPALAGILVHAGWKLIPFRQVAALWRSHKGEALILVVTAVSIVAVNMFEGVLIGLALAVGKTAWEASHVKLEAIDKGTGPIQVYLSGNATFLRLPKILDSLEALPQDRPVELDLSGLHHLDHACRTALESWAERHSAIGTEPVKITEPVKVASAENATANTWHR
>NZ_CP015098.1|WP_062928167.1|4854083_4855541_+|serine-hydrolase
MSKNAMSWDEQGSWNANGAWGSRNSAGRKLDLAHWQARLDTLRAEHHVPAASLAILVDGTVHELASGVLHRGTGVEATTDSVFQLGSIAKIYTATLIMQLAASGELDLDAPVVDVLPEFSVADPDATRAITTRRLLSHTSGLTCDFTYDSGRGDDCLAKYVEAARNVALDCPPGAAISYSSVGYNVLGRIIEVVTGKVWDEALKDQLLTPLGLSHTMTLPEEALRFRAAMGHLGDAGQDPDPAPSWDLMPRSAGPYGRVIATAGDVARLAGMHLNGGVAQNGARVLSEETVALMQRRVVRSPDKWTVSADGWGLGWTLYDWDGVQGYGHDGASIGQYGYLRVVPSAGLAVVLLTNGGGARELYAALCRELLADLAGVRMPEPFAPPAQPPVVDFAPLVGTYRREGVVITVTERNGAGHAVYEFVDGMKDFSEPLEIDLVPVTGTVFAGTGVGAAFSEDYMPVIFSTLEDGTGCVYIGMRCGPKTA
>NZ_CP015098.1|WP_062928168.1|4855894_4857256_+|triacylglycerol-lipase
MSRYRSRPRSTFNRLTAAAIAAVACVCVSAVPVDAATGTDTEPVVSRGVTIPAFYTPPAQLPAANGTLIRQEPLPLGVSLPGLDGRPLPGTATRLMYKSTDSSGKPVAVTGAYIEPSAQWKGDGPRPLVAVVSGTMGQGDQCAPSFALQHPLTVSEETLSIAYDNLAIYRLLATGAAVVVTDYVGLGATDRLHTYVNRLDEAHAVLDAVRAARDLPGTSLTSGSRVGLYGYSEGGGATASAAELQPTYAPDVQLAGTYAGAPPANLTAVMKGIDGSALVSALGWAINGFSQTYPDLRSVTEANLNDAGRKALADTSTMCVGESVVRYGFTRSTAWTTSGKSVADVIAAEPRAQAVLDEQRIGTLKPTGPVRVATGIHDDIVPHAQARQLAVDWCRKGGNVTYEAVDLPNLGDRILTNHLAPLLTDQGAAISWLADRLEGKPTVSNCWTMPFQR
>NZ_CP015098.1|WP_159029603.1|4857716_4857989_-|hypothetical-protein
MPQQRSGIPGITSLRSRLARRAQVTLVGVAAGGVAAAIAVTPSLAGTDSSKPATVAAQKETGYGPEPEADSKLVTQDGSPSTMATAALSS
>NZ_CP015098.1|WP_062928169.1|4858220_4858688_-|peptidoglycan-binding-protein
MRALTKALVSVTTAVGIAAGGLATAGTAMAAPAQVKEQAVSAEAVAPLAVVNLGLSEAQAKDVQRALKARWRYTGEIDGQLGTNSWKAMQRFLKEHYSYTDSIDGIVGPNTVEALQRYLKRFYGYTGPIDGVAGSGTKAAFKRAADVCPGGCLLT
>NZ_CP015098.1|WP_062928170.1|4859013_4859811_+|peptidoglycan-binding-protein
MSRWKELPAELHPHVHQLIVRLRRLKDRSELSTRQLAARTGYSAKSWQRYLNGRSLPPREAVEAMARVGGDDPARLLVMHEIAAQRWAEGRGFTTDAPENPSETPAQPPTEQQPYRRHLRAAVTAGAVVTVLSVSVALLLAVRLTEARAQLARDRGDAVTTAPATVSESLVPVIYTCRLEQRDGRWYAGLSRTTSILLSNTHVGLEVAEAQCLLHRAGTAPGDIDGVFGPKTRRAVERMQKQNGLIVNGVIDPPTWQALRSADAK
>NZ_CP015098.1|WP_062928171.1|4859807_4860698_+|XRE-family-transcriptional-regulator
MTAEHTRLAAALRELRAGAGLSLAALAERTAYSKSSWERYLNGKSLPPRQAVRELCRLANEPDGRLLALWEIAESHWSGRAVAPAPAPPTDESPRPHPQESPPLAGTWRRRLGGSRLLVVLASAYTVIVGGVAALLFLLLPDSQAQEDEPLPASVPFSLAPQCHGAACEGRDPMRLICGLGPETLASYRTATGAHVELRHSKKCGASWARTWGTEVGDRLDVTAGGPTHGVRIRTKDDAAAFVYTGMAEVRPGSTVRACFRPASADGERECFEARVGGAATTTRPPSSPVASGSPD
>NZ_CP015098.1|WP_062928172.1|4861091_4861667_-|hypothetical-protein
MRWLTLYARSRQIPASLAAVVISAVAVWALARDGSGGPGDPRPAALVLAAAAMAVSVGLSGQDLALDRTAAIRWAHRRAAHVLLGGAVVGTVLLAVQAMGEGMATTAFVVRDSAGLMGLVALGAALWGGQFAWTLPFAWLAFSFFAPPATSVPMQVASWMLLPPGTAAGTWTALVLAVVGTAAYALAGPGR
>NZ_CP015098.1|WP_062928173.1|4861663_4863061_-|hypothetical-protein
MNIRVVHIELKRSVAPWAGAVVLTTALAFLYLLGAVWWQGTTAWTAQWTSLAMWTRSLLFYLWPLAVGLGALQGLRDHRSKMSELLTSTPRPAWHRAATVAGTTTLTLASAFALLVLVGGVQVLAHTEYTHLGWLPISLVGALFLVAGAVLGMGAGRALPSALTPPALAMGALVFTALMYMSPGRTETTTATGITSTEPNRVSLLSPAVQEVRDVLVTLSASVHVGQTIWLLGMAATGFALLVAATPRARLIALTPVLAGVALALLVLPSDPRRMYVVDEAAAELVCDGSVCVTKAHQARLADLAGPGEEALRLLHGALGGQAPVSVRENTAVLPEGSTPRWSRETVLFDFDDEIIAAAKGEELTWALIAKGMVPGCTAVGWSGFGNDEYAQTVAAGWVLGGLRPLPGTEAGGLRREVDAATRPVWKELKALPRAEQLSRINAMRTAAFSCKGDAFDALKGGASR

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Crispr_ID: NZ_CP015098_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_12

5695259-5695356

Orphan

Consensus_repeat	Method
CGCCCCGGGCGGCACGCACGCGCGCAGGCTGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_12

>merge|NZ_CP015098|12|5695259-5695356|CRISPRCasFinder
CGCCCCGGGCGGCACGCACGCGCGCAGGCTGCGGGGACCGGGGGGCCGCCTGCGGCCATCCATGTCGCCCCGGGCGGCACGCATGCGCGCAGGCTGCG

>NZ_CP015098|12|12|5695259-5695356|CRISPRCasFinder
CGCCCCGGGCGGCACGCACGCGCGCAGGCTGCG	GGGACCGGGGGGCCGCCTGCGGCCATCCATGT
CGCCCCGGGCGGCACGCATGCGCGCAGGCTGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062928750.1\|5683814_5684222_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062928763.1\|5699198_5700803_-\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP015098.1\|WP_062928760.1\|5695551_5697324_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP015098.1\|WP_062928764.1\|5701037_5701928_+\|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP015098.1\|WP_062931609.1\|5697661_5698138_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062928766.1\|5703333_5704011_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP015098.1\|WP_062928756.1\|5691061_5691886_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|236183
NZ_CP015098.1\|WP_062928761.1\|5698106_5698727_-\|septum-formation-inhibitor-Maf	unknown	unknown	gnl\|CDD\|178901
NZ_CP015098.1\|WP_062928753.1\|5686610_5687573_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|188646
NZ_CP015098.1\|WP_079129111.1\|5694142_5695123_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP015098.1\|WP_062928762.1\|5698963_5699173_-\|acyl-CoA-carboxylase-subunit-epsilon	unknown	unknown	gnl\|CDD\|379386
NZ_CP015098.1\|WP_062928767.1\|5704224_5705025_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|181069
NZ_CP015098.1\|WP_062928755.1\|5689062_5690700_-\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP015098.1\|WP_062928754.1\|5687719_5688424_+\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|371225
NZ_CP015098.1\|WP_062928768.1\|5705111_5706263_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|128563
NZ_CP015098.1\|WP_062928757.1\|5691992_5692430_-\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|372719
NZ_CP015098.1\|WP_062928758.1\|5692526_5693975_+\|NAD(P)H-quinone-dehydrogenase	unknown	unknown	gnl\|CDD\|236112
NZ_CP015098.1\|WP_062928751.1\|5684291_5685176_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|365919
NZ_CP015098.1\|WP_062928765.1\|5702150_5703257_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP015098.1\|WP_062928752.1\|5685168_5686605_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143429

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062928764.1\|5701037_5701928_+\|biotin--[acetyl-CoA-carboxylase]-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	8.59272e-59
NZ_CP015098.1\|WP_062928763.1\|5699198_5700803_-\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP015098.1\|WP_062928760.1\|5695551_5697324_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP015098.1\|WP_062928752.1\|5685168_5686605_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143429	cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.	0
NZ_CP015098.1\|WP_062928767.1\|5704224_5705025_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|181069	PRK07657, PRK07657, enoyl-CoA hydratase; Provisional.	9.362e-74
NZ_CP015098.1\|WP_062928766.1\|5703333_5704011_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.45507e-08
NZ_CP015098.1\|WP_062928756.1\|5691061_5691886_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|236183	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional.	1.69609e-133
NZ_CP015098.1\|WP_062928768.1\|5705111_5706263_+\|GGDEF-domain-containing-protein	gnl\|CDD\|128563	smart00267, GGDEF, diguanylate cyclase. Diguanylate cyclase, present in a variety of bacteria.	6.03133e-42
NZ_CP015098.1\|WP_062928753.1\|5686610_5687573_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|188646	cd00959, DeoC, 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.	2.03283e-76
NZ_CP015098.1\|WP_079129111.1\|5694142_5695123_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	3.37985e-82
NZ_CP015098.1\|WP_062928762.1\|5698963_5699173_-\|acyl-CoA-carboxylase-subunit-epsilon	gnl\|CDD\|379386	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit. This family includes the epsilon subunits of propionyl-CoA carboxylase, EC:6.4.1.3, and acetyl-CoA carboxylase, EC:6.4.1.2. These enzymes are involved in the biosynthesis of long-chain fatty acids. The epsilon subunit is necessary for an efficient interaction between the alpha and beta subunits of these enzymes.	1.28427e-08
NZ_CP015098.1\|WP_062928755.1\|5689062_5690700_-\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP015098.1\|WP_062928754.1\|5687719_5688424_+\|PH-domain-containing-protein	gnl\|CDD\|371225	pfam10756, bPH_6, Bacterial PH domain. This domain has a bacterial type PH domain structure. This domain was previously known as DUF2581. This family is conserved in the Actinomycetales. Although several members are annotated as RbiX homologs, RbiX being a putative regulator of riboflavin biosynthesis, the function could not be confirmed.	0.00175867
NZ_CP015098.1\|WP_062928757.1\|5691992_5692430_-\|gamma-glutamylcyclotransferase	gnl\|CDD\|372719	pfam13772, AIG2_2, AIG2-like family. This family is found in bacteria and metazoa.	2.00965e-24
NZ_CP015098.1\|WP_062928758.1\|5692526_5693975_+\|NAD(P)H-quinone-dehydrogenase	gnl\|CDD\|236112	PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed.	0
NZ_CP015098.1\|WP_062928751.1\|5684291_5685176_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	7.00332e-40
NZ_CP015098.1\|WP_062928765.1\|5702150_5703257_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	4.20416e-29
NZ_CP015098.1\|WP_062928761.1\|5698106_5698727_-\|septum-formation-inhibitor-Maf	gnl\|CDD\|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	5.31475e-96

>NZ_CP015098.1|WP_079129111.1|5694142_5695123_+|DeoR/GlpR-transcriptional-regulator
MFAAERRQLILEMVRANGAVSLRELARVVQTSEVTVRRDVRALEAEGLLDRRHGGAVLPGGFTRESGFPQKSHLATAEKTAIADLAANFVEEGEAIVVGAGTTTQELARRLARVPGLTVVTNSLLVAQALAHANRVEVVMTGGTLRGSNYALVGSGAEQSLHGLRVSRAFLSGSGLTAERGLSTSNMLSASVDRALVQAAAEVVVLADHTKLGTDTMFQTVPTDLITRLVTDEPPAHDDRAATELQALADQGVQIAVAGGQGGSAGSGPGGPGGDAVPARQQRRDVPVPGPRRQVPGGGGGLRSTTMLGDQGPGAERARVADLRRR
>NZ_CP015098.1|WP_062928758.1|5692526_5693975_+|NAD(P)H-quinone-dehydrogenase
MEYVTRIVIIGGGPGGYEAALVAAQLGAEVTVVDCDGLGGASVLTDCVPSKTLIATAEVMTTFDSSYEELGIIVADDTPHIEQAARVVGVDLGKVNRRVKRLALAQSHDITASVTRAGARVMRGRGRLEGMQALDGSRKVVVRTADGSEETLTADAVLIATGGHPRELPDAQPDGERILNWTQVYDLDELPEELIVVGSGVTGAEFAGAYQALGSRVTLVSSRDRVLPGEDPDAAAVLEDVFRRRGMNVMGRSRAQSAKRVGDRVEVTLSDGRVITGSHCLMAVGAVPNSAGMGLEDAGVKLRESGHIWTDKVSRTTAPGVYAAGDVTGVFALASVAAMQGRIAMYHFLGDAVAPLNLKTVSSNVFTDPEIATVGYTQADVDGGKIDARAVKLPLLRNPRAKMQGIRDGFVKIFCRPGTGIVVGGVVVAPRASELIHPISIAVDNNLTVEQIAKAFTVYPSLSGSIAEVARQLHTRKEDGEG
>NZ_CP015098.1|WP_062928757.1|5691992_5692430_-|gamma-glutamylcyclotransferase
MSLYAAYAGNLDARLMSRRAPHSPLRATGWLNGWRLTFGGEHMGWEGALPTIVEDPFSQVFVSLYDIAPMDEESLDRWEGVGLDIYRRTRVRVHTLEGEDTAWAFTLNAYEGGLPSARYLGEIADAAESAGAPHDYVMELRKRPC
>NZ_CP015098.1|WP_062928756.1|5691061_5691886_-|purine-nucleoside-phosphorylase
MNASLLPDDIQGDPHAAADAAAARLRELTGAETHDVALVMGSGWAPAVDALGAPEAEFQVTELPGFPPPAVEGHGGKIRSYRIGNKRALVFLGRTHYYEGRGVAAVAHGVRTAVSAGCKTVVLTNGCGGLREGMRPGQPVLISDHINLTATSPIIGANFVDLTDLYSPRLRALCKEVDATLEEGVYAQFPGPHYETPAEIRMARVIGADLVGMSTVLEAIAAREAGAEILGISLVTNLAAGMTGEPLNHEEVLQAGRDSATRMGSLLTQVLGRL
>NZ_CP015098.1|WP_062928755.1|5689062_5690700_-|phospho-sugar-mutase
MHEELIAQAQAWLTEDPDPETRTELARLIDAEDHTELAARFSGTLQFGTAGLRGELGAGPMRMNRSVVVRAAAGLAAYLRKQGHGDGLVVIGYDARHKSHDFARDTAAVMTGAGLRAAVLPRPLPTPVLAFAIRHLGAVAGVEVTASHNPPRDNGYKVYLGDGSQIVPPADIDIAAEIAAVPSLTTVRRPTEGWDTLDDSVLDAYLARTDAVLSEGSPRTAHTVYTAMHGVGKDVLLAAFARAGFPAPVLVAEQADPDPEFPTVAFPNPEEPGAMDLAFATARACETAPDLIIANDPDADRCAVAVQDGTDWRMLRGDEVGALLAAHLVRSGATGTFAESIVSSSLLGRIAEKAGLPHVETLTGFKWIARAEGLRYGYEEALGYCVDPDGVRDKDGITAALLITELASQLKEEGRTLLDLLDDLAVEHGLHATDQLSVRVEDLSIIAAAMQRLREQPPTELAGLPITRTDDLTEGTAELPPTDGLRYTLDGARVIVRPSGTEPKLKCYLEVVVPVGSHPGLPEARAKATALLESIKRDLSTAAGI
>NZ_CP015098.1|WP_062928754.1|5687719_5688424_+|PH-domain-containing-protein
MTSPESQPPTPQPAEPESKDRVYRSAPAIAGGVLLLAIAGWLGVDAVITGEGRTPWLALALLLLVVPLVVAFTLRPAVYAGDDRLRIRNPFRIVVVPWGQVASLRSAYSNEVLTESGAKYQLWAVPVSLRARKKAARREMRATAQARRGMGREVSRGGALGTTEGLRQGFSREPLSDGPVRAETDRIMDDLRGLHEARRQAESARGEVTVRWAYEVLAPAVAGAVLALILVGLG
>NZ_CP015098.1|WP_062928753.1|5686610_5687573_-|deoxyribose-phosphate-aldolase
MPSSALTAAHPLKDVAASDSALRRFLHGLPGVDAVGLEGRAASLGTRSIKTTAKAYAIDLAISMVDLTTLEGADTPGKVRALGAKAVKPDPTDRTTPSTAAVCVYPDMVAVAKEAVAGSGVKVASVATAFPAGRAALDVKLADVRDAVAAGADEIDMVIDRGAFLSGRYLKVYDEITAVKEACGTSARLKVIFETGELSTYDNIRRASWLGMLAGADFIKTSTGKVAVNATPANTLLMLEAVRDFRAQTGIQVGVKPAGGIRTSKDAIKFLVLVNETAGEDWLDNHWFRFGASSLLNDLLMQRQKLATGRYSGPDYVTVD
>NZ_CP015098.1|WP_062928752.1|5685168_5686605_-|aldehyde-dehydrogenase-family-protein
MASVFEYAPAPESRAIADIAPSYGLFIDGEFVEAADGKVFKTVSPSTEEVLSEVARAGSEDVDRAVKAARRAFEKWSALPGAERAKYLFRIARIIQERSRELAVLETLDNGKPIKETRDADLPLVAAHFFYYAGWADKLDHAGFGANPRPLGVAGQVIPWNFPLLMLAWKIAPALATGNTVVLKPAETTPLSALFFADICRQAGLPKGVVNILPGYGDAGAALVSHPDVNKVAFTGSTAVGKEIARTVAGTRKKVTLELGGKGANIVFDDAPIDQAVEGIVNGIFFNQGQVCCAGSRLLVQESIQEELLDSLKRRLSTLRLGDPLDKNTDIGAINSEEQLTRITSLVEQGEAEGAERWSPACELPESGYWFAPTLFTNVTQAHTVARDEIFGPVLSVLTFRTPDEAVAKANNTPYGLSAGIWTEKGSRILAVAGKLRAGVVWSNTFNKFDPTSPFGGYKESGFGREGGRHGLEAYLDV
>NZ_CP015098.1|WP_062928751.1|5684291_5685176_-|aldehyde-dehydrogenase-family-protein
MSDRLNVLKTYKLYVGGKFPRSESGRVYEVTDSKGKWLANAPLSSRKDARDAVVAARKAFGAWSGATAYNRGQVLYRVAEMLEGRRDQFTREVADAEGLSKSKAAAVVDATIDRWVWYAGWTDKIAQVVGGGNPVAGPFFNLSSPEPTGVVAVLAPQESSFLGLVSVLAPVIATGNTAVVVASEKAPLPALSLAEVLATSDVPGGVVNVLSGRTAELATPLAAHQDVNAIDLAGADESLAKELEIAAADNLKRVLRPQPVDYAETPGIDRMTAFLETKTVWHPTGSLGASGSSY
>NZ_CP015098.1|WP_062928750.1|5683814_5684222_+|hypothetical-protein
MARHDSPKKPAAQRALAVLATAGVALGAGTASAAADTTSILGVVNTRPTSLGKIDPQSGLQAATGTVGYVTGPVAGLKPNPLAGTGVDPLDNGLGTQLADFKPMTSQALTGPVAQAQSVGSVPVVGQVAGLLSQQ
>NZ_CP015098.1|WP_062928760.1|5695551_5697324_-|ATP-grasp-domain-containing-protein
MRKVLIANRGEIAVRVARACRDAGIASVAVYADPDRDALHVRAADEAFALGGDTPGTSYLDIEKVLGAARESGADAIHPGYGFLSENAEFAQAVLDAGLIWIGPPPQAIRDLGDKVAARHIAQRAGAPLVAGTPDPVSGADEVVAFAEEHGLPIAIKAAFGGGGRGLKVARTLEEVPELYDSAVREAVAAFGRGECFVERYLDKPRHVETQCLADQHGNVVVVSTRDCSLQRRHQKLVEEAPAPFLSDAQMEELYSASKAILKEAGYVGAGTVEFLVGLDGTISFLEVNTRLQVEHPVTEEVAGIDLVREMFRIADGEELGYGDPELRGHSFEFRINGEDPGRNFLPAPGTVTTFAPPSGPGVRLDAGVESGSVIGPAWDSLLAKLIVTGRTRKEALQRAARALEEFQVEGMATAIPFHRAVVKDPAFAPELTDSSDPFTVHTRWIETEFVNEIKPFAAPADTEADEEPGRETVVVEVGGKRLEVSLPSSLGMSLARTGLAAGAKPKRRAAKKSGPVASGDTLASPMQGTIVKVAVEEGQEVKEGDLVVVLEAMKMEQPLNAHRSGTIKGLSAEIGASVTSGAAICEIKD
>NZ_CP015098.1|WP_062931609.1|5697661_5698138_+|hypothetical-protein
MIRRPVAWVVAVVLFAEAFGIAALNWFLGVVVDRQEMSLAGLDPHMMSVSSKIGGIAFGLYFALCGLVALLVALRDRPPAGFGRVLLISAAVVHGLLGAFTVGLVGWPAFLFMVLVLALIVLLLMTYDRPAEPADTAPGGGRSGEGSPVTSPPAPTTP
>NZ_CP015098.1|WP_062928761.1|5698106_5698727_-|septum-formation-inhibitor-Maf
MTDQRRRRLVLASQSPARLGLLRQAGLAPEVIVSGVDEDAVTAPTPAELALALAEAKASVVAARPEVKGALVIGCDSVLDLDGQALGKPADAGEATARWKSMRGRAGTLQTGHCVYDTLTGRYVSATASTVVHFGDPSDEEIAAYVASGEPLYVAGAFTLDGRSAPFIDGIDGDHGNVIGISLPLLRRLLAELGVGITELWAPAEK
>NZ_CP015098.1|WP_062928762.1|5698963_5699173_-|acyl-CoA-carboxylase-subunit-epsilon
MTIKVVRGNPTPEELAAALAVVRARAAAAAAAPPGAPTSRDSWSDPSRIASHRLPLPGPAAWGRTYWPG
>NZ_CP015098.1|WP_062928763.1|5699198_5700803_-|acyl-CoA-carboxylase-subunit-beta
MSEPEEQQQPDIHTTAGKLADLKRRIEEATHAGSARAVEKQHAKGKLTARERIELLLDEGSFVELDEFARHRSTNFGLDKNRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCPVIGINDSGGARIQEGVASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNATSGVAHHMAGDEKDAIEYIKQLLSYLPSNNLSEAPAFPEEADLEVSDEDRELDVIVPDSANQPYDMHAVIEHVLDDAEFFETQPLYAPNIVTGFGRVEGHPVGIVANQPMQFAGCLDIKASEKAARFVRTCDAFNVPVITFVDVPGFLPGVDQEHDGIIRRGAKLIYAYAEATVPLITIITRKAFGGAYDVMGSKHLGADLNLAWPTAQIAVMGAQGAVNILHRRTIAEAEAGGEDLEAVRARLIQEYEDALLNPYVAAERGYIDAVILPSDTRRHVVRGLRQLRTKRESLPPKKHGNIPL
>NZ_CP015098.1|WP_062928764.1|5701037_5701928_+|biotin--[acetyl-CoA-carboxylase]-ligase
MKTPPGADGNSSDGPREPRSSRWSDLGRPPLNVTALRRGLVRQGGLWSEVDVVQRTGSTNSDLVARAAKGEVTEGAVLVAEEQTAGRGRLDRQWTAPPRSGLFFSVLLTPSEVPVARWGWLPLLTGVAVATGLSRAAGVDTALKWPNDLLVTVGGVERKAGGILAERAGDGVVIGVGINVSLKDDELPVPTAGSLGLAGAVSTDRDPLLRGVLRSLEEWYGKWRGAGGDPGPSGLQEAYAAGCATLGRVVRAELPGDRSVVGEAVAVDGDGRLVLATEEGVQEPVGAGDIVHLRPA
>NZ_CP015098.1|WP_062928765.1|5702150_5703257_+|adenylate/guanylate-cyclase-domain-containing-protein
MTVDDSGSGEDAQGADSGEDPLALRLEGLILGAERRYTPFQAARSAGVSMELASRFWRAMGFADIGQAKALTEADVLALRRLAGLVEAGLLSEAMAVQVARSTGQTTARLAEWQIDSFLEGLTEPPEPGMTRTEVTYPIVELLLPELEEFLVYVWRRQLAASAGRVVQAADDEEMVDRRLAVGFADLVGFTRLTRRMEEEELGELVEAFETTAADLVAANGGRLIKTLGDEVLYAADDAGTAAEIALRLIETMAHDETMPELRVGMAFGTVTTRMGDVFGTTVNLASRLTSIAPKDAVLVDTAFAEELIRTQDAPASEAEAVEEAAAAEKEGEEPPSYRFGLQPMWQRPVRGLGVVEPWLLTRRDSAP
>NZ_CP015098.1|WP_062928766.1|5703333_5704011_-|hypothetical-protein
MTTNTPTKPHQATRAAPAPRRREPPAPHEPAPAETPRVRGRHRKPHPRKVLLAAGGLALAAGALSLLRLTSGPGPDARIVEAGPRPEPVTTATDDTTGTAAAFPAAPDTSPSSPAALGGLTPSPATKGARPSPSTTTGPPAASTAAVPAPTTIPGTPNPPNAPAPAPTTPDGDTTRPTPAPAQPAPPSRTTPTQAPKPEETEKPHDPGLCVPVIGLCVDSPVDRR
>NZ_CP015098.1|WP_062928767.1|5704224_5705025_+|enoyl-CoA-hydratase/isomerase-family-protein
MSEERFGEFVAVRRHEQGHVAELVLDRPKAMNAVSTEMARSIAGACAALGEDREVRAVVLTSTHERAFCVGADLKERNSFSDADLLRQRPVTRGAYTGVLELPVPTVAAVHGFALGGGFELALACDVIVADRTAVVGLPEVSVGVIPGGGGTQLLPRRVGAARAAELIFSARRVEAAEAGELGLVDQLVEEGRDREAALALAARIAGNSPVGLRAAKRALRLGQGLDLRAGLEVEDAAWRATAFSGDRAEGVAAFNERRKPQWPGE
>NZ_CP015098.1|WP_062928768.1|5705111_5706263_+|GGDEF-domain-containing-protein
MGEDRRLAAVVALAQGMAAAHGSREAWRAAAVGACRALGGSFAALSVWERELGRLRVLVNVGELAEGEEEFPEDEAYPVHQFAEITEFLHEQWAGGGEPDAWVETAEGPAAGRQSGYCHQRVAALRRRGRGCCVVAPIVLHGRAWGELYVARPAGEAVFGRGDADFATVLASVVAAGIAQTERLEEARRLAFTDSLTGLANRRAVDVRLERAIERHRRDGAVVSLVVCDLNGLKRVNDTHGHAAGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPPADQVVKAAGELCRRAAELELGDGVACGVASTEDPIGPVRSARRLFRLADAAQYRAKAERASRPVVAGRAGPDDPVVRLADEPSQESGGERRRFRGRHAP

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Crispr_ID: NZ_CP015098_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_13

5936175-5936341

Orphan

Consensus_repeat	Method
GCGGCGGTCTTCCGCGTGCGGCGCGGCTTGGCCTCGGCGGCCTCCGCCTCC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP015098_13

>merge|NZ_CP015098|13|5936175-5936341|PILER-CR
GCGGCGCGGCTTGGCCTCCGTGCCCTCGGCCGTGTCGACGGCGGCCTCGGCCGCTGCGGCGGTCTTCCGCGTGCGGCGCGGCTTGGCCTCGGCGGCTTCCGCGTCCGGGGCGGTGGCGGCGGTCTTCCGCGTGCGCCGCGGCTTGGCCTCGGCGGTCTCCGGCTCCT

>NZ_CP015098|13|1|5936175-5936341|PILER-CR
GCGGCGCGGCTTGGCCTCCGTGCCCTCGGCCGTGTCGACGGCGGCCTCGGCC	GCTGCGGCGGTCTTCCGCGTGCGG
CGCGGCTTGGCCTCGGCGGCTTCCGCGTCCGGGGCGGTGGCGGCGGTCTTCC	GCGTGCGCC
GCGGCTTGGCCTCGGCGGTCTCCGGCTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062928945.1\|5943096_5944839_+\|DUF3152-domain-containing-protein	unknown	unknown	gnl\|CDD\|371483
NZ_CP015098.1\|WP_062928944.1\|5942041_5943088_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP015098.1\|WP_062928941.1\|5939046_5939796_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|205967
NZ_CP015098.1\|WP_030854792.1\|5940343_5940571_-\|DUF3107-domain-containing-protein	unknown	unknown	gnl\|CDD\|378634
NZ_CP015098.1\|WP_062928933.1\|5927755_5928979_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341027
NZ_CP015098.1\|WP_062928938.1\|5934982_5935882_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP015098.1\|WP_062928931.1\|5925564_5926683_-\|magnesium-and-cobalt-transport-protein-CorA	unknown	unknown	gnl\|CDD\|213364
NZ_CP015098.1\|WP_062928932.1\|5927140_5927725_+\|suppressor-of-fused-domain-protein	unknown	unknown	gnl\|CDD\|377450
NZ_CP015098.1\|WP_062928936.1\|5931499_5933578_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP015098.1\|WP_031132394.1\|5940706_5941354_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP015098.1\|WP_062928935.1\|5930884_5931490_+\|MarC-family-protein	unknown	unknown	gnl\|CDD\|225006
NZ_CP015098.1\|WP_033311058.1\|5929139_5929781_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062928943.1\|5941561_5941786_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062928934.1\|5929888_5930749_+\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
NZ_CP015098.1\|WP_063827578.1\|5947312_5948389_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062928937.1\|5934092_5934986_+\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|224349
NZ_CP015098.1\|WP_062928942.1\|5939850_5940120_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_167455418.1\|5933712_5933865_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_010047687.1\|5948525_5949485_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|366597
NZ_CP015098.1\|WP_062928946.1\|5945096_5946884_+\|DUF3492-domain-containing-protein	unknown	unknown	gnl\|CDD\|340841

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062928944.1\|5942041_5943088_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.1344e-26
NZ_CP015098.1\|WP_062928941.1\|5939046_5939796_+\|hypothetical-protein	gnl\|CDD\|205967	pfam13794, MiaE_2, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like.	3.39262e-94
NZ_CP015098.1\|WP_030854792.1\|5940343_5940571_-\|DUF3107-domain-containing-protein	gnl\|CDD\|378634	pfam11305, DUF3107, Protein of unknown function (DUF3107). Some members in this family of proteins are annotated as ATP-binding proteins however this cannot be confirmed. Currently no function is known.	2.00836e-35
NZ_CP015098.1\|WP_062928933.1\|5927755_5928979_-\|MFS-transporter	gnl\|CDD\|341027	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.72304e-91
NZ_CP015098.1\|WP_062928938.1\|5934982_5935882_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	3.25218e-15
NZ_CP015098.1\|WP_062928931.1\|5925564_5926683_-\|magnesium-and-cobalt-transport-protein-CorA	gnl\|CDD\|213364	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily. This bacterial subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes the Mg2+ transporter Mycobacterium tuberculosis CorA (which also transports Co2+). Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	4.57944e-168
NZ_CP015098.1\|WP_062928932.1\|5927140_5927725_+\|suppressor-of-fused-domain-protein	gnl\|CDD\|377450	pfam05076, SUFU, Suppressor of fused protein (SUFU). SUFU, encoding the human orthologue of Drosophila suppressor of fused, appears to have a conserved role in the repression of Hedgehog signaling. SUFU exerts its repressor role by physically interacting with GLI proteins in both the cytoplasm and the nucleus. SUFU has been found to be a tumor-suppressor gene that predisposes individuals to medulloblastoma by modulating the SHH signaling pathway. Genomic contextual analysis of bacterial SUFU versions revealed that they are immunity proteins against diverse nuclease toxins in polymorphic toxin systems.	1.49217e-30
NZ_CP015098.1\|WP_062928936.1\|5931499_5933578_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	1.28503e-21
NZ_CP015098.1\|WP_031132394.1\|5940706_5941354_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.57857e-17
NZ_CP015098.1\|WP_062928935.1\|5930884_5931490_+\|MarC-family-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	9.81232e-41
NZ_CP015098.1\|WP_062928934.1\|5929888_5930749_+\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	8.86932e-48
NZ_CP015098.1\|WP_062928937.1\|5934092_5934986_+\|NYN-domain-containing-protein	gnl\|CDD\|224349	COG1432, COG1432, Uncharacterized conserved protein [Function unknown].	1.50077e-06
NZ_CP015098.1\|WP_062928945.1\|5943096_5944839_+\|DUF3152-domain-containing-protein	gnl\|CDD\|371483	pfam11350, DUF3152, Protein of unknown function (DUF3152). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	4.5338e-68
NZ_CP015098.1\|WP_010047687.1\|5948525_5949485_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|366597	pfam01370, Epimerase, NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.	3.35027e-41
NZ_CP015098.1\|WP_062928946.1\|5945096_5946884_+\|DUF3492-domain-containing-protein	gnl\|CDD\|340841	cd03813, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.	1.87321e-165

>NZ_CP015098.1|WP_062928938.1|5934982_5935882_-|alpha/beta-hydrolase
MTSRPAFPPPPGARAYLLRTARGEFAVVDSSPAAGEEGRGVVLMLPGFTGSKEDFRLLHEPLAQRGYRVVAVDGRGQHESDGPLDDESAYAQRELARDVLAQAEALGGPVHLVGHSLGGQIARAAVLLDHSPFVSFTLVSSGPAEISVSQQQRVKLLRDALAVLSMEEVWEAIQAMGPPEEVGGPARGLGDQDQLRRRWLGHSPAQLLATGRQLCTEPDRVAELAAVPLPFHVLSGAHDDTWPVALLDDMALRLEAHRTVVTGAEHSPNADRPIPTAHALADFWDGIGPGPSKAAAGTP
>NZ_CP015098.1|WP_062928937.1|5934092_5934986_+|NYN-domain-containing-protein
MNDDLPALSARIDHTNELLQRMLAEVAKTPSTHAIFVDAGYLYAAGGRLIAGTEDRRAFDLDAEGLIDALIDKARTIFADSRLLRVYWYDGARRRIHTAEQQTIAELPDVKVRLGNLNANNQQKGVDSLIRSDLESLARHRAISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFFKPYVSRRTAPAYETAAGRPTREDVRFVGAQIAAKWLAARGRDTLVELLPGHPYLPGSVDQDLLVEAEGLLQYSLRGQADLRRALRDGFWDHLRTQY
>NZ_CP015098.1|WP_167455418.1|5933712_5933865_-|hypothetical-protein
MRFEIMRLDDVDGTAVDSTVVDAASVNRIVQQAAAIGQRLWIRPAGTTAS
>NZ_CP015098.1|WP_062928936.1|5931499_5933578_-|trypsin-like-peptidase-domain-containing-protein
MSVTDRSHQELHEQAADEAARRYEDSAAERERVEGRLAAGVRFPDSPDALAVRADRILDRGGLSPSAVVADIHREAMDLPDANERIIDLSNELQAWSFLPRGVRAGATVARITLRRDGRELPHGTGFLVSPRLMMTNHHVLPDESFARRCFAEFNAQVTADNLPDTVVRMELDPGTFFAADRRLDFALVAVAPTLDGPPPGEIFGWNRLSVQLGKLVLGEKVNIIGHPSGRLKEIALRDNAVLVRLDDFVHYTTDTEPGNSGSPVFNDQWEVVALHHSGVPKKDDQGRVLRKDGRPWQQGDGDDAIDWVANEGVRISSILKHLAGLDLDPARRALLAEMGPDAGLDQAMTTAPAPGAQPQGTTAVPGVTIPSVPEAATTAPRAGGERPRVGLRARAGAFGGRQHLVFLHGRDQQDNYPDELRRTWTAGLNRGLTLATLPPLDPEDVWFPFYGTRLHDLVSVRESAAGPIGLDQLSAAAAAEMFAAESPTGSYERLLYEAAARAGMPQNGPATTEGFGAGLVGVLHRPLAWLAAKSDLDEWTIATFLRDVDLYLGDSAVRQAVLDSVMETMPTSGELVLVTHSLGTVVGVDLLTRLPESLDPVLLVTAGSPLGLDGVNERLLTRGPHQPPRVRDWVNVWCPTDTVAIGCPLEDERWGKLTQLAVPNGRERAHKMDEYLGHPGPAREIRGVLRA
>NZ_CP015098.1|WP_062928935.1|5930884_5931490_+|MarC-family-protein
MFDVAVFGSLFLTLFVIMDPPGITPIFLALTAGRPGKVQKRMAFQAVCVAGGVITVFGLLGHQILNYLHVSVPALMIAGGLLLLLIALDLLTGKTDEPKQTKDVNVALVPLGMPLLAGPGAIVSVILAVQKAHSVATQVSVWAAIIAIHVVLWLVMRYSLVIIRIIKDGGVVLVTRLAGMMLSAIAVQQIINGVTQVIQGS
>NZ_CP015098.1|WP_062928934.1|5929888_5930749_+|PHP-domain-containing-protein
MRIDLHTHSTASDGTDSPAELVRKAAVAGLDVVALTDHDTTRGHAEAIAALPEGITLVTGAELSCRIDGISMHMLAYLFDAEEPALLAERELVRDDRVPRAQGMIAKLQELGVPVTWEQVARIAGDGSVGRPHVASALVELGVVPTVNDAFTPDWLADGGRVFVEKHETDPFEAIRLIKGAGGVAVFAHPGASKRGLTVPEAAIAEMAAAGLDGVEVDHMDHDADTRARLRGLAKELGLLVTGSSDYHGSRKTCVLGEYTTDPEVYGEITRRAFGAFPVPGAGGAV
>NZ_CP015098.1|WP_033311058.1|5929139_5929781_+|hypothetical-protein
MRGEPSCPKCGGRVRAPGLFSDSWQCDVHGTVHPVQPVIPPSVDALNVVVHRTQVPLWMPWPLPVGWLFTGVACAGDDRTGGRATAVACTGPGPLGGMGELILVAEELGVGLGARYAGMDGPDPGPHMNVEKPPQAKVLAAGRPTPLWHVAGAPDDRAVFAGEALGMWLWAVVWPEQSGLLMYDELVLTDLRDAGAEVELVPCGALSPRLLGP
>NZ_CP015098.1|WP_062928933.1|5927755_5928979_-|MFS-transporter
MDPFDAGAGGLLKQPKSVWATAGASVVAFMGIGLVDPILPSIAQGLDATASQVSLLFTSYFLITAVAMLVTGFVSSRIGGRRTLLLGLAFVVVFAGLAGTSGSVGELVGFRAGWGLGNALFVSTALAVIVGAAAGGSAAAILLYESALGLGMACGPLLGALLGDASWRYPFFGTAFLMAVGFLCIAVFLKEQPKPARKTSLLDPVKALGHGGLASAAASAFFYNYTFFTVLAFTPFVLNMSPYRSGAVFFAWGVLLAVFSVIVAPRLQKRFGSLKVLGGSLVLLAADVLVLGYGSHTAAVVCTILSGAFIGVNNTVYTELALGVSDAPRPVASAGYNFVRWFAAAAAPFFAPKIEEWTDVHVPFVVAAVTAVAGAAVVVVRRKALTHEAEELEPKHATEDGVTVFAN
>NZ_CP015098.1|WP_062928932.1|5927140_5927725_+|suppressor-of-fused-domain-protein
MADVLPLVEARLRSALGEPDARAAVTFLGTDRIEVLRFQEAGIVRYASLGMSAHPMTDPTAVVADPVKGPRAELVLSVRAGLAETDKVLRPLAVLAASPQVEGLVVAPGASLDVGEPLWPGAPFTSVLVAEPGGLVEDLELDEPLDPVRFLPLLPMTPNEAAWKRVHGAQALQEKWLTSGTDLRDPSRKSVPLE
>NZ_CP015098.1|WP_062928931.1|5925564_5926683_-|magnesium-and-cobalt-transport-protein-CorA
MSMIRDLRAAVVRPSRVSLLKDGGTYDATRSPAASSAVVDCAVYRDGRRIETGTALTPHEAVRLVRRDGGFVWIGLHEPTEAEFSGIASEFGLHPLAVEDAVQAHQRPKLERYDDSLFTVFKTIHYVEHDQLDANSEVVESGEVMCFTGRDFFITVRHGGQGSLRALRHRLQDDPELLAKGPSAVLHAIADHVVDGYIAVADAVQDDIDEVETEVFSPGRKGAPRGSDAGRIYQLKREVLEFKRAVSPLLRPMQLLSERPMRLVDPDIQKYFRDVADHLARVQEQVLGFDELLNSILQANLAQASVAQNEDMRKITSWAAIIAVPTMVCGVYGMNFEYMPELHWKYGYPVILSFTVAVCLGIHRTLKRNGWL
>NZ_CP015098.1|WP_062928941.1|5939046_5939796_+|hypothetical-protein
MTSSDKPENASDTAAAEPTSVAARDWATASADPQYRAAVVDLLGALAYGELAAFERLAEDAKLAPTLADKAALAKMASAEFHHFERLRDRLAEIGEEPTRAMEPFVAAYDGFHKQTAPSDWLEGLVKAYVGDSIASDFYREVAARLDSDSRNLVLAVLDDTGHGGFAVEKVRAAIDVDPRVGGRLALWARRLMGEALSQSQRVVADRDALSTMLVGGVADGFDLAEVGKMFSRITEAHTKRMAALGLAA
>NZ_CP015098.1|WP_062928942.1|5939850_5940120_-|hypothetical-protein
MLLEALSSAILGLALAWAAAHRLSHRLPARPMVLSTGVAGSLFGAFVMHSALDAGHVLIVLLGAVIVSVASLSLLLRPAGRLRRRSATA
>NZ_CP015098.1|WP_030854792.1|5940343_5940571_-|DUF3107-domain-containing-protein
MEVKIGVQHAPREIVLESGQTAEEVERVVAEALAGKSQLLSLVDEHGRKLLVPADRLAYVEIGEPAPRKVGFGAL
>NZ_CP015098.1|WP_031132394.1|5940706_5941354_-|TetR/AcrR-family-transcriptional-regulator
MTAIEQTEAVRPRGTRLPRRARRNQLLGAAQEVFVAQGYHAAAMDDIAERAGVSKPVLYQHFPGKLDLYLALLDQHCESLIQSVRNALASTTDNKQRVRATMDAYFAYVEDDGGAFRLVFESDLTNEPAVRERVDKVTNECAEAICDVIAEDTGLSRAESMLLASGLGGLAQVVARSWLHSDRSVPRDQAVQLLTSLAWRGIAGFPLHGMDQPHH
>NZ_CP015098.1|WP_062928943.1|5941561_5941786_-|hypothetical-protein
MAVDPTDPETFEVEDAPEAQEFDVEAPEVDAAEQQADIAPDRDDPLTAVDPDRASEADLVEQARIVSLDEDDYR
>NZ_CP015098.1|WP_062928944.1|5942041_5943088_+|alpha/beta-hydrolase
MSSTELPFVPPANVLPKVGTVRVAEGERLRSVELPGVTLTVRSRPPAREGLPPALYVHGLGGSSQNWSALMALLDGVVDGEALDLPGFGDSPPPDDGNYSVTGHARAVIRYLDASGRGPVHLFGNSLGGAITTRVAAVRPDLVRTLTLVSPALPEIRVQRAAVPTGLLAVPGVALLFTRLTREWTAEQRVRGVMALCYGDPGRVTPEGFRNAVQEMERRLRLPYFWDAMARSARGVVNAYTLGGQQGLWRQAERVLAPTLLVYGGRDQLVGFRMAQKAARAFRDSRLVTLPDAGHVAMMEYPETVALAFRELLEDAGELGAQRARRAGRAAAGGDAVDEAGTDESMGG
>NZ_CP015098.1|WP_062928945.1|5943096_5944839_+|DUF3152-domain-containing-protein
MGRHSRRGPVAKGDSADTTEVRDGRTGAAQAQRPGQGQGPGQAPDPGRGVRTAPPGIPQGGWPSQGPRRVPGPRPAPKEGAPPQGMPRLPDGWHPDGTPPQGLPRLPDGTPVRGVPRLAEGTPAHGVPRMADGAPAHGVSRPADGTLAQGVSRLPDGAPAQGVSRLPDGTRAHGIPPVAGGTPSRGVPRLPDGTPAHGFPQARGGHPEQRETGGGWGGLRGSGGAPAEVGAPIPRQRRASVPGPRQDYLDAFVDEEDDVFAPRTPASAHAADAYASVTDWSAGAGAAAAADSGPGSGSGGHEDARPTGAPVPGKGGKGRAFTGIAAAAVTTVLAVVVAGQVTDGNGGVGVQSQSAPDQTRDVRDSASRADGRAPAPEVKPLTYDEKMSRTYPLGAKLKGSGRFDAVPGIAEAPGAGQKFTYRVDVEQGLGLDGALFAEAVQQTLNDQRSWAHNGARTFERIHSGKPDFVITLASPGTTADWCAKSGLDTTQDNVSCDSAATERVMINAYRWAQGSPTYGNSKIHAYRQMLINHEVGHRLRYNHVTCDKDGDLAPVMQQQTKFLDHDGIHCRANPWPYPGN
>NZ_CP015098.1|WP_062928946.1|5945096_5946884_+|DUF3492-domain-containing-protein
MRIGLLTEGGYPYVSGDARLWCDRLVHGLAQHEFDVYALSRSQHQEDEGWIPLPQNVRRVRTAPLWMAEDDEVALGRRARRRFTECFGELAAVLCGAPGLSSGGASGAVAGISGASASAAGAISRRASSAPGGGPTSEADRFANALYGLAELARDEGGLMGALRSEAAVSTLERACRAPGAHRTAREARVPDLLTVAAHLERALRPLSLDWYEDDGLGAVDLCHATSGGTAALPGLLARHFTGVPLMVTEYGVRLRTHYLTTPDAPPAVRSLLAAFEGRLAAEAYRQAEVVTAGNTHARRWQERCGAEREKLRTVYPGMNARPFAEVGESPDYAHPDTLVWVGRVEPAKDLVSLLHAFAEVRKQSPRARLRIVGAPAGPEGAAYLGHCRTLAAQLFPDEAEGPHAAGENPVSFEETGGPELPAAADAYASGAVTVLSSVVEGFPVGLVEAMLCGRATVSTDVGAVVEVIGGTGLVVPPRNPRALAEACVALLRDPERRARLGAAARARALELFTVEQNIEAFHGIYLEIVSRAPVRRALLDGTGEPLPFAVPAEAHVSVRWTAASPSLAVRSGPGWAASRPVRATTPLPAPEGAR
>NZ_CP015098.1|WP_063827578.1|5947312_5948389_+|hypothetical-protein
MHRHRELCERAVDPLEIAAGLEAHGITDRTAARFRHRDVFSLAEEMYARVSRDGGTPLPAPPVTPRVRAGWALLTLLPGALCAAAVTAVHLTHGQSRLLAASAGALAVALALRAALRRGPLSRTDADRPGPRPGAASGRTAPWTVWLVAYSLLGNGLLDSALAGGPDALPTGTADGPWPLTAAPVLALALACAPAAWTAHLFTVRTRRRLGASRGLEDFAAAVRPLLLGTFALFLGAVAALLILCAAVLDEPAALAQALSLGSLLFLARLLTTHGFTYAPSVVLTAAATTEAAALATVFASRLPGLRFLATPVETLVTTWGAGSVPVLACGAAALTLLVHATRKLTRASAHAPPEPAP
>NZ_CP015098.1|WP_010047687.1|5948525_5949485_+|NAD-dependent-epimerase/dehydratase-family-protein
MRVLLIGANGYIGRFVADRLLADPAVQLTALGRGDDADVRFDLASGSPGALTRFLDAVHPGVVVNCAGATRGGARELTRHNTVAVATVCEALRRSGCGARLVQIGCSAEYGPSQPGSSTAEDAVPRPGGPYGVSKLAATELVLGSGLDAVVLRVFSPAGPGTPAGSPLGRLAEAMRRAMQSGDGELKLGGLGAQRDFVDVRDVARAVHAASLSAAQGVINIGSGRAVRLRDAAAVLARVAGYGGALHELDGPPGALRTAIGHPRPDPDHAPPVAYPYPDGCGSWQQADVRTARDRLGWRPRIGLEESLADIWMEAACRI

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Crispr_ID: NZ_CP015098_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_14

7226076-7226224

Orphan

Consensus_repeat	Method
GGTCCCGGCCCCGCGCCGGCCACCGCGACCGCGGCCGTGATCGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_14

>merge|NZ_CP015098|14|7226076-7226224|CRISPRCasFinder
GGTCCCGGCCCCGCGCCGGCCACCGCGACCGCGGCCGTGATCGGCGGTGGCCGTGGCCGTGTGCCGGGTTCTGGCGCTGTGCCGAGCCGTGGCCCCGCGCCGGGTCCCGGCCCCGCGCCGGCCACCGCGACCGCGGCCGTGATCGGCGG

>NZ_CP015098|14|13|7226076-7226224|CRISPRCasFinder
GGTCCCGGCCCCGCGCCGGCCACCGCGACCGCGGCCGTGATCGGCGG	TGGCCGTGGCCGTGTGCCGGGTTCTGGCGCTGTGCCGAGCCGTGGCCCCGCGCCG
GGTCCCGGCCCCGCGCCGGCCACCGCGACCGCGGCCGTGATCGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062929887.1\|7240668_7241460_-\|serine-protease	unknown	unknown	gnl\|CDD\|238113
NZ_CP015098.1\|WP_062931684.1\|7229796_7230366_-\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238245
NZ_CP015098.1\|WP_062929877.1\|7224107_7224833_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP015098.1\|WP_062929876.1\|7223268_7223979_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_CP015098.1\|WP_062929875.1\|7222624_7223272_-\|DUF2064-domain-containing-protein	unknown	unknown	gnl\|CDD\|275102
NZ_CP015098.1\|WP_062929872.1\|7218839_7220195_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062929880.1\|7227864_7228596_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_CP015098.1\|WP_062929874.1\|7221869_7222628_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP015098.1\|WP_062929884.1\|7233540_7234635_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062929886.1\|7239452_7240568_+\|AlkZ-family-DNA-glycosylase	unknown	unknown	gnl\|CDD\|377630
NZ_CP015098.1\|WP_062929873.1\|7220311_7221553_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|238198
NZ_CP015098.1\|WP_062929870.1\|7216154_7217963_-\|methylmalonyl-CoA-mutase-small-subunit	unknown	unknown	gnl\|CDD\|239649
NZ_CP015098.1\|WP_062929885.1\|7234627_7239031_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379062
NZ_CP015098.1\|WP_062929869.1\|7213980_7216155_-\|methylmalonyl-CoA-mutase	unknown	unknown	gnl\|CDD\|236508
NZ_CP015098.1\|WP_062929878.1\|7224835_7225948_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP015098.1\|WP_062929882.1\|7231210_7232467_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|310523
NZ_CP015098.1\|WP_062929881.1\|7228857_7229742_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366181
NZ_CP015098.1\|WP_062929871.1\|7218316_7218823_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP015098.1\|WP_062929883.1\|7232504_7233536_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP015098.1\|WP_062929879.1\|7226737_7227739_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187566

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062929887.1\|7240668_7241460_-\|serine-protease	gnl\|CDD\|238113	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.	1.87063e-72
NZ_CP015098.1\|WP_062931684.1\|7229796_7230366_-\|cysteine-hydrolase	gnl\|CDD\|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	8.00724e-36
NZ_CP015098.1\|WP_062929877.1\|7224107_7224833_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.47242e-91
NZ_CP015098.1\|WP_062929876.1\|7223268_7223979_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	5.09456e-43
NZ_CP015098.1\|WP_062929875.1\|7222624_7223272_-\|DUF2064-domain-containing-protein	gnl\|CDD\|275102	TIGR04282, hypothetical_protein, transferase 1, rSAM/selenodomain-associated. Members of this protein family show strongly correlated phylogenetic distribution, and in most cases co-clustering, with an unusual radical SAM enzyme (TIGR04167) whose C-terminal pfam12345 domain often contains a selenocysteine residue. Other members of the conserved gene neighborhood include another putative glycosyltransferase, an alkylhydroperoxidase family protein (TIGR04169), and a phosphoesterase family protein (TIGR04168). The cassette is likely to be biosynthetic but its exact function is unknown. [Unknown function, Enzymes of unknown specificity].	9.7751e-46
NZ_CP015098.1\|WP_062929880.1\|7227864_7228596_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	1.09957e-18
NZ_CP015098.1\|WP_062929874.1\|7221869_7222628_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.55141e-11
NZ_CP015098.1\|WP_062929886.1\|7239452_7240568_+\|AlkZ-family-DNA-glycosylase	gnl\|CDD\|377630	pfam06224, HTH_42, Winged helix DNA-binding domain. This family contains two copies of a winged helix domain.	6.6959e-62
NZ_CP015098.1\|WP_062929873.1\|7220311_7221553_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|238198	cd00321, SO_family_Moco, Sulfite oxidase (SO) family, molybdopterin binding domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). SO catalyzes the terminal reaction in the oxidative degradation of the sulfur-containing amino acids cysteine and methionine. Assimilatory NRs catalyze the reduction of nitrate to nitrite which is subsequently converted to NH4+ by nitrite reductase. Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate.	7.94144e-30
NZ_CP015098.1\|WP_062929870.1\|7216154_7217963_-\|methylmalonyl-CoA-mutase-small-subunit	gnl\|CDD\|239649	cd03677, MM_CoA_mutase_beta, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, Beta subunit-like subfamily; contains bacterial proteins similar to the beta subunit of MCMs from Propionbacterium shermanni and Streptomyces cinnamonensis, which are alpha/beta heterodimers. For P. shermanni MCM, it is known that only the alpha subunit binds coenzyme B12 and substrates. The role of the beta subunit is unclear. MCM catalyzes the isomerization of methylmalonyl-CoA to succinyl-CoA. The reaction proceeds via radical intermediates beginning with a substrate-induced homolytic cleavage of the Co-C bond of coenzyme B12 to produce cob(II)alamin and the deoxyadenosyl radical. MCM plays an important role in the conversion of propionyl-CoA to succinyl-CoA during the degradation of propionate for the Krebs cycle. Methylobacterium extorquens MCM participates in the glyoxylate regeneration pathway. In M. extorquens, MCM forms a complex with MeaB; MeaB may protect MCM from irreversible inactivation. In some bacteria, MCM is involved in the reverse metabolic reaction, the rearrangement of succinyl-CoA to methylmalonyl-CoA. Examples include P. shermanni MCM during propionic acid fermentation and Streptomyces MCM in polyketide biosynthesis.	4.67395e-180
NZ_CP015098.1\|WP_062929885.1\|7234627_7239031_+\|AAA-family-ATPase	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.64096e-09
NZ_CP015098.1\|WP_062929869.1\|7213980_7216155_-\|methylmalonyl-CoA-mutase	gnl\|CDD\|236508	PRK09426, PRK09426, methylmalonyl-CoA mutase; Reviewed.	0
NZ_CP015098.1\|WP_062929878.1\|7224835_7225948_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.12788e-51
NZ_CP015098.1\|WP_062929882.1\|7231210_7232467_+\|alpha/beta-hydrolase	gnl\|CDD\|310523	pfam05990, DUF900, Alpha/beta hydrolase of unknown function (DUF900). This family consists of several hypothetical proteins of unknown function mostly found in Rhizobium species. Members of this family have an alpha/beta hydrolase fold.	1.11023e-58
NZ_CP015098.1\|WP_062929881.1\|7228857_7229742_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.12927e-13
NZ_CP015098.1\|WP_062929871.1\|7218316_7218823_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	4.3888e-16
NZ_CP015098.1\|WP_062929883.1\|7232504_7233536_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	7.68431e-19
NZ_CP015098.1\|WP_062929879.1\|7226737_7227739_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.04628e-72

>NZ_CP015098.1|WP_062929878.1|7224835_7225948_+|HAMP-domain-containing-histidine-kinase
MRDNLLIALYAFAGAAVTGLAGAGVLRLIRRRSLTVSLAVVAAVGVVAMLAGTLAVAWAMFLSPHDLTVVTTVVAMAAVVSLATALLLGRWVVARSRELAVAARSFGDGGDFAAPDGPATAELAAVSRELAATSARLAESRERERALETSRRELVAWISHDLRTPLAGLRAMSEALEDGVAADPNRYLRQMRTEVERLNDMVGDLFELSRIHAGALALTPTRISLYDLVGDALAGVDPLARAHGVRLVGGRVEPVPVEVDGKEMSRVLGNLLVNAIRRTPADGTVAIAAERSPEGVVLSVTDGCGGIPEEDLPRVFDTGWRGTHARTPPAGAGLGLAIVRGIVEAHQGRADVRNIPGGCRFEVVLPAAAS
>NZ_CP015098.1|WP_062929877.1|7224107_7224833_+|response-regulator-transcription-factor
MQQPYEPPDAAGRTPRILVVDDDPTVAEVVAGYLDRAGYAVDRADDGPSALARAAARRPDLVVLDLMLPGMDGLEVCRRIRGNGPLPVIMLTARGDEDDRILGLEVGADDYVTKPFSPRELVLRVESVLRRSRPATPGDRLGAAGLTVEPTARRVTKNGTELALTLREFDLLSFFLRHPGRAFGREDLMREVWGWDFGDLSTVTVHVRRLRGKVEDDPARPRLIQTVWGVGYRFEPGEGDD
>NZ_CP015098.1|WP_062929876.1|7223268_7223979_-|glycosyltransferase-family-2-protein
MTPPDVDVVLPCLNEAEALPWVLERIPPGWRALVVDNGSTDGSAGIARAWGATVVHEPRRGFGAACHAGLTAATADVVCFCDCDASLDPGLLAPFVREVRDGGADLVLGRRRPQGRGAWPPHARAGNLALARMLRRRTGLRLHDLGPLRAARREELLALGLSDRRSGYPLQMVVRAADAGWRIAEHDVPYLPRAGASKVTGTWRGTWQAVRDMSRVLAETPAPERGTTTHEGGPVR
>NZ_CP015098.1|WP_062929875.1|7222624_7223272_-|DUF2064-domain-containing-protein
MTTLLVIAKEPRPGRVKTRLTPPFTPGEAAELAEAALADTLNAVAATPATRRVLVLDGAPGPWLPPGFDVVAQCAGGLDERLAEAFAGCAGPALLIGMDTPQVTPELLTVDFADCDAWFGPAEDGGFWALGLACPDPALLRGVPMSTPVTGAVQRERLASAGLRVRDLPPLRDVDTAADAHAVAALAPRGRFAARLARCPAAGGPVTGPGPVGPR
>NZ_CP015098.1|WP_062929874.1|7221869_7222628_-|class-I-SAM-dependent-methyltransferase
MSAPSATALAWAAADPYDAALRAGRGPLFLRRTDGWLLPLEVERWCAGADPVDRDVLDRCEGAVLDVGCGPGRLVAELAARGRAALGIDVSEAAVEHTARLGGQALRRSVFEQLPGEGRWDTVLLMDGNIGIGGDPRALLERVAGLLRPGGLLIAETVPADVDERVRVHITDARATTGDPFPWARLGTRALLGYARDWERAGQWTAGGRHFAALRSRSSRTTSSSAEPPKRTAVISSQRARNTSAGRPVADR
>NZ_CP015098.1|WP_062929873.1|7220311_7221553_+|molybdopterin-dependent-oxidoreductase
MRDDPRDLRLPTSPGFWRSPLRGPWFTSVLGLVLLAGITVLFVTGLLSYAAYNPDLSPVNDKTPDKGILGFYLFSWPTNPHWLYRLNQGVHVTLGITLIPVLLAKLWSVVPRLFTLPPARSLAHALERISLLLLVGGGLFEFVTGVLNVQLDYVFPGSFYPLHFYGAWVFFAAFVAHALLKAPTALRNLRRLREEKNDLVSPRPAEPTVSRRGALWFVGGGSLLLFATTVGQNFGGPLRRTALLAPHGGAEPGSGPNGFQINKTAAYAGIDTAETAEDAWRLVVTGRTGTVRLSRARLTGLALHSSALPIACVEGWSTPDQWWRGVRLRDLAALVGYEDDPPDVFVESLQRHGAFRKAALSADQVADPRSLLALYVNGEELSPDHGYPARIIVPAAPGVLNTKWVARMTFGDL
>NZ_CP015098.1|WP_062929872.1|7218839_7220195_-|hypothetical-protein
MRTPPSAPPSLDLRRDLYAVAAAVLLVTVSVAVGRHIEDTRRTLFVDWPPLLASWAPHLGPGTPAAVLVAIATVAQGPALAARLPWRALLPAAWGTAMAWIFSLALVDGWDRGIARRLTTRHEYLQVIDRFHDIPAALRGFTGHILLDSPDNWPAHIAGHPPAATLTFVLLDRIGLRGGGWAGVWCIAVGATACVAVLVTIRALADETLARRAAPFLVLAPAAVWMGTSADAYFAAVAAWAVALLALAVTRGSLGWAGASGLLFGLTCYLSYGLTLVALIAGAVLVLGRHGIRERPALSVPWLAGLAVVPAAFTIAGFDWWEAYRLLVTRYGQGAGGIRPYGYWVWANLACTVLVTGLATAAGLRRTAAALVRRRTGPPAAVRLAFLVSVALLALLVADLSGMSKAETERIWLPFALWLLPACAFLTRPRAWLTAQALLALLLNHLLITGW
>NZ_CP015098.1|WP_062929871.1|7218316_7218823_+|ATP-binding-protein
MVIPLMKQAADEPGTDEQAALRCGAVWADGAACAVEARRALQAFLAYVPCTGRRPVPAPLAIDAELVVSELVTNAIRHAPGACGMILQLSDDGLAITVWDTSAELPVVRKRDGQRFGGHGMHVVHTVSADVAVAPLGTGKQITAYLRTAPDVAPDVDTVAMTDTHPVA
>NZ_CP015098.1|WP_062929870.1|7216154_7217963_-|methylmalonyl-CoA-mutase-small-subunit
MTVLPDDGLELAGEFPDVPHEQWQRLVAGVLRKSGKDVEGAEAEEALSTALEDGLRTRPLYTARDSAPEPGLPGFAPFVRGGRAEGNTLGGWDVRQRHTVADSGPVLTDLENGVTSLWLGVGGSGIPVPELGRVLDGVHLDLAPVVLDAGPDTEDAARELLRLHEERGVAQDKARGNLGADPLGHEARSGQQGDFAPAAGLARLCAEGYPGLRALTVDALPYHEAGGSAAQELGCSLATAVAYLRELTGAGLSVEQACAQLEFRYAATADQFLTIAKLRAARRLWARVAEVCGAPRAGAQLQHVVTSPVMMTRRDPWVNMLRSTIATLAAGAGGADAVTVLPFDHALGLPDAFARRIARNTSTILIEESHLARVIDPAGGSWYVERLTDELAHAGWEFFRRIERLGGQAAALRSGDLARDLAETWQARTGRLAKRREPITGVSEFPFLAEKPVVRESAPEQPSGGLPRVRRDEAYEALRARSDAHLAATGSRPRIFLAALGPAAAHTARLTFASNLFQAGGIEPVTEGGFEESGASEAVLCSSDALYEEQAEAVAGRLKAAGAAHVFLAGRPGDHPGVDGYVFAGCDAVAVLSATLDRMGVS
>NZ_CP015098.1|WP_062929869.1|7213980_7216155_-|methylmalonyl-CoA-mutase
MGIPDFSGIELGMPAPDGGADEWRTAVKNASGGDDLLWETPEGIAVKPLYTGRDLEGLDFLETYPGAAPYLRGPYPTMYVNQPWTIRQYAGFSTAEESNAFYRRNLAAGQKGLSVAFDLPTHRGYDSDHPRVTGDVGMAGVAIDSIYDMRQLFDGIPLDRMTVSMTMNGAVLPVLALYIVAAEEQGVPPEKLAGTIQNDILKEFMVRNTYIYPPKPSMRIISDIFAYTSQRMPRYNSISISGYHIQEAGATADLELAYTLADGVEYIRAGREAGLDVDAFAPRLSFFWAIGMNFFMEVAKLRAARLLWAKLVRQFDPQNAKSLSLRTHSQTSGWSLTAQDVFNNVTRTCVEAMAATQGHTQSLHTNALDEALALPTDFSARIARNTQLLLQQESGTTRVIDPWGGSAYVEKLTYDLARRAWQHIEEVEAAGGMAKAIDAGIPKLRIEEAAARTQARIDSGRQPVIGVNKYRVETDEQIDVLKVDNSSVRAQQIEKLRRLRAERDERACQDALDALTRAAGGEGNLLELAVHAARAKATVGEISDALEKVYGRHASQIRTISGVYRNETGESPSVDRTRTLVSAFEEAEGRRPRILVAKMGQDGHDRGQKVIATAFADLGFDVDVGPLFQTPAEVARQAVEADVHIVGVSSLAAGHLTLVPALREALAEEGREDIMVVVGGVIPPQDVPTLLEMGAAAVFPPGTVIPDAAYDLVQRLSDGLGHDL
>NZ_CP015098.1|WP_062929879.1|7226737_7227739_-|NAD-dependent-epimerase/dehydratase-family-protein
MRVLVTGGAGFIGSHVVSALRERGHEAVVFDVREDPAADVRDTAAVRRALAGVDAVCHQAAKVGLGDGVADAADYVSHNDLGTAVLLAAMAEAGVRALVLAGSMVVYGEGRYACARHGVVRPGPRAVAELDAGRFEPPCPVCGDALSPGLVREDAPADPRNVYATTKLAQEHLAAAWARCTGGSAVSLRYHNVYGPGMPRDTPYAGVASFFRSALARGEAPRVFEDGRQRRDFVHVRDVAAANAVALEAAAAPGALTAFNTGSGDPHTVGEMARALAAAYGGPEPVVTGEYRLGDVRHITADSSRLRAELGWKPAVGFEEGMTEFARAGMRGA
>NZ_CP015098.1|WP_062929880.1|7227864_7228596_+|flavodoxin-family-protein
MTAPSAPDAAHRFDDLTALYINCTLKPSPQRSHTQGLIDKSRSIMDNAGVTTELIRAVDHDIAPGVYPDMTEHGFATDVWPTLYERVMAADILVLAGPIWLGDNSSVTKQVIERLYACSSLLNPQGQYAYYGRVGGCLITGNEDGIKHCAMNVLYSLQHLGYTIPPQADAGWIGAAGPGPSYLDADSGGPENDFTNRNTSFMTWNLMHIAALLKRAGGVPAHGNQRSQWDAGCRPGADNPEHR
>NZ_CP015098.1|WP_062929881.1|7228857_7229742_-|MarR-family-transcriptional-regulator
MTSEQVERVRRFNRTVAERVGVLHDHYLGGARPYGQARLLWQIGDGGTHDVRGVRERLGLDSGYVSRLLRALERDGLVTVEPHPLDRRVRTVRLTEAGQRERAFLDDRSDTLAASLLDPLDARQRERLTSAMAEVERLLTASVVSLEELGPDHPDAAHCLRSYAAELGELFDGGFDPANSLLPDPGELRAPRGLFLVARLHGEPVGCGGLKLPAGAPAEIKRLWVSPGTRGLGLARRLLSELEARAARHGRDRVRLDTNKALTAATRLYRDSGYTEVPAFNDEPYAHHWFEKRL
>NZ_CP015098.1|WP_062931684.1|7229796_7230366_-|cysteine-hydrolase
MERGADPARSALILIDMINTYDHEDAELLVPSVEGILPVLTELLGRAREADVPVIYVNDNSGLWRSHHGELLDAALSQPNAHLIEPIRPDDRSLFVMKARHSVFFETPLSYLLWSLDVGHVVLTGQVTEQCVLYSALDAHIRHLEVTVPKDAVASIHTHLASAALEMMERNMGARITTAKETEFEPHKT
>NZ_CP015098.1|WP_062929882.1|7231210_7232467_+|alpha/beta-hydrolase
MHGADLERLESHVLTALRELDAVQHVSAAGGTEETPTPETYEAIDSAAREVALAFEAHAPLGAMLAAEFDALAARRERFGPAAPPPHWVAWQRSLLVPVLYATDRALDGKRAGFGAGRGELTYGEARVGIPDDHRMGAAEKSRVWRLRFRDDPARVATLGAVARSTAPEFTELTRKRLAECEVDQALLFVHGYNVPFRDAVMRAAQIAYDLNFTGVPLLYSWPSKGTVGGYVADENSVSRAVPYFQEFLRLVLTETNVSEVHVLAHSMGNRLLTEALADFDTTSLPEGSGRLGQVIFAAPDVDAEVFRRRLPRIARQAAGCTLYASSVDRALAASRTLAAAPRAGQAGAGIVVAPGLDTVDASALDTGLMGHSYVGDHTSVLADVYGLLRQALPPSRRFGLVSVPHADGSYWSFQPQK
>NZ_CP015098.1|WP_062929883.1|7232504_7233536_+|trypsin-like-peptidase-domain-containing-protein
MTHFLDRLPFEWSAPGARELQELLVSVYDEPMAVKAMAGKAGIVTWDVDWRQPVYGVWFDLIPAARNQGKLRALLSVIESGPDLAVAERLKELIGDRPVLEAPAADPPPGTWKDFSDPDPLERRIFSTDTFQDVAFLRRGTEQATAVCRLLVTDDRGRRYHGTAFRVSHDLLLTNHHVLCGGGTRPEQVDAWFGYEQDLDGRDLEHVSVACDPGSVVGDETDDWAVIKAAGPLPDDAVVIELPERAGLDVGDRLYIIQHPNGGVKKFAARHNVVRYVDDEIVQYWTDTDRGSSGSPVFDERWRLVALHRRWTRIGPLSAPAEYRNEGVRIERVAAGMAHAGLR
>NZ_CP015098.1|WP_062929884.1|7233540_7234635_+|hypothetical-protein
MALLLDQTVFAFDDAQARELLDVLLKVHDREASVRQFVAAVGLLPAAIEWRGPLTDIWPRVLEHAACARKLRQLIQVVAHHPNSAEYDIFKVLLSQEPPAKETDPCAALLVGGGRTRAFIDRGELRATLREMLDAPGGRVLIVDGDRRCGKTWTWFLLCHVLGNRRITPYKIDLSAYVPPVEVSDIAAALTDQLGWDLGHGDPYASEATHVRRLVNVAKRHMRALSEDHWLVFDGMVGTALTPSALRMVEGLAEAVVDGETGDRLNMVLIAYDGQLQPSADPYVWRTRLGPIGVEHLHEFFCSIAASAGARIDPAVADLLVKEVLREATGGDHDPGLPLPLERISHVAALRGRQLYQMYGGTGG
>NZ_CP015098.1|WP_062929885.1|7234627_7239031_+|AAA-family-ATPase
MAESSPGRDVTEDDVLNLLRSAPSTGALPGADDAGPRRWALREKTALVSAFDAAELEEDGPGEHTAEAALREFLSHDCERVTTRQGRRWRLLPAARTTTLERLGTPDRLLAALRSGAGTGQDTARDCAERLLTGTARPLGELRLEELHAALTVAGWLDDAPRARAALAARSLTLPGTQDISRHIELARLFQPLDALADATFCGRERELGELARHVRTGADGPPGRPPWLLIHGPGGVGKSTLVARFVLDGVTRARPSHGRPYAYLPFDRTDLVPEQPLTVLGEMLRQLPILLPALDGPAVPELQGAVRTTLEADSRAESELRGTRGPRTGRRSDETALVARFAHLVTGALRPGNRPVLLVLDTFEQAQRKGAFTLARLLDFLEVLQDLCPWLRIIAAGRAPVDDGRFAHVPLEGFDPATAESYLRRLLPGGGREYEAALQTVIRTVGSDPLSLKLAADLFRREGPQALRDASLRRQVQLRLQPEERQGILYRRILDHLDDPGLRRIASPGLTVRRVTPDVIRHVLAGPCGLGEVDERRARTLFRRLREEAALVEETPGREAVVHRADVRRVMLPMLRGEGRTLVHRIHRKAVAYYADLAERDPVNAVEHRAEELYHRLCLGQSARTLDRRWLSGAGQLLDSALEELPVRGRIYLSERLGITVAPDLLRQADDDTWARQALRAGTACLAEGRAEETLLLLDERPDHVGGDVELAALRIRALTVLGRMVEARELVEPALELASRLSDARGFVEIAVSGARIDEDLGRFGAARALLRQARRAAEPPGLGEALPLSVAVAELRLHRREDRADSVEARRLRDEVVERVSRLGSRERARHPALVRELAAEVGDHVPELVSQAARLLGVDVQGAAGKILRTSLSDDDVRDLAEVTRAAKKEPAARREDDDEADTGQEDNSSTWLAGHNSTVRGEVVGAYIDSRAERQPSWHHALVNTYQYEVDQASYTRSRSGSRPGSAVPMPGAGRDAVVVVPGFMGSALEDTDSGRRLWGHDAIAGLLDVWWRNGARALELTADERAGDTRRVRPGGLLRTPAWAPLFGGLEPYGRLLRTVRDSVVHPDAVLEFSYDWRLSAAHNAALLTQAATRHLERWRAHPEVARTGGGAGYDAREPRLVFVAHSTGGLVVRAAMARGLAEVTRQVLCLGTPFRGVPKALEVLRPYRNSGPAAVPSLALRQIMRTLPGFYDLLPDYRCVEHHDGEVRRLELDDIGWLGGDTALARDAMRTRRDTDAASLVSPVQAVVGSGQPTVQSVRLRSDGTVLPLLSSVRMHNDGEPVRDQHGNLSRWDLGGDGVVPCRSASSPTRGDFFVPVQYGALTTHRTVLTWVRDMLSEGHVAEAAPGSSGRGLARALPDDGGIGLPSSDRHELSLSLSDVVEAGQRCMIQVRGARSQVPVRCDHIDGLSPSIVAVVRRYDDEDVVAEVTFPAPGLYRVTVEEGNRSAGQVVLVVDPEDGD
>NZ_CP015098.1|WP_062929886.1|7239452_7240568_+|AlkZ-family-DNA-glycosylase
MTNTKRSVTGTAPLLGTRALNRATLDRQLLLRPARLSVAAAVEHLVGLQAQNVKPPYYALAARLDGFTPEALSRLMADREAVRIVTMRSTIHTHTADDCLTLRPLVQPARDRELVTFRKGLAGVDLERLAGLARDLVETEPRTMTQLREALLREWPDADPQALAVAARCRLPLVQVTPRGLWGRSGQVRLTTAEHWLGRPARPAPAPDAVVLRYLAAFGPASVKDMQAWAGMTRLRDAFERLRPRLVTFQDETGVELFDLPEAPRPDPETPAPPRFLPEFDNLLLSHADRTRVVPPEHRGRSWQGNLAHRTLLVDGFLAGLWRLEEDALVVEPFERLTRVQRDEVTAEGERMLRVMHPESSYDIRFGVVRG
>NZ_CP015098.1|WP_062929887.1|7240668_7241460_-|serine-protease
MFGLNAAKKAAAVAAATAAAATTALLAAPTAAAAPQPIVGGTTTTTSAYPFVMQITDASQNQFCGGTLVSPTKVVTAAHCMVGETTSSVRVVGGRTYLNGTNGTVSRVSKIWMHPSYTDVSNGDDVAVLTLSTSMPYTPAKYVSSSQTSVYAAGTTARILGWGDTSENGSASNQLRTATVPTVSDSSCASSYGSGFVRSDMVCAGKTSGGVDTCQGDSGGPLLIGGVLAGITSWGEGCAQAGYPGIYTRLTTFSSLVTTQVNS

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Crispr_ID: NZ_CP015098_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_15

7239323-7239404

Orphan

Consensus_repeat	Method
CGGGAGCGGTCGCCGGGCGGGGGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_15

>merge|NZ_CP015098|15|7239323-7239404|CRISPRCasFinder
CGGGAGCGGTCGCCGGGCGGGGGCCCGGAGTTGCGAACAGAACCTGTCCGCAAGTGCGGGAGCGGTCGCCGGGCGGGGCCCC

>NZ_CP015098|15|14|7239323-7239404|CRISPRCasFinder
CGGGAGCGGTCGCCGGGCGGGGGCCC	GGAGTTGCGAACAGAACCTGTCCGCAAGTG
CGGGAGCGGTCGCCGGGCGGGGCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062929887.1\|7240668_7241460_-\|serine-protease	unknown	unknown	gnl\|CDD\|238113
NZ_CP015098.1\|WP_062931684.1\|7229796_7230366_-\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238245
NZ_CP015098.1\|WP_062929891.1\|7247345_7248932_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236236
NZ_CP015098.1\|WP_062929892.1\|7248955_7249462_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP015098.1\|WP_062929895.1\|7254034_7255492_-\|catalase	unknown	unknown	gnl\|CDD\|163712
NZ_CP015098.1\|WP_062929880.1\|7227864_7228596_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_CP015098.1\|WP_062929889.1\|7244720_7245545_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_CP015098.1\|WP_062929877.1\|7224107_7224833_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP015098.1\|WP_062929884.1\|7233540_7234635_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062929886.1\|7239452_7240568_+\|AlkZ-family-DNA-glycosylase	unknown	unknown	gnl\|CDD\|377630
NZ_CP015098.1\|WP_062929888.1\|7241663_7244516_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226415
NZ_CP015098.1\|WP_062929890.1\|7245669_7247349_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341278
NZ_CP015098.1\|WP_062929885.1\|7234627_7239031_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379062
NZ_CP015098.1\|WP_062929881.1\|7228857_7229742_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366181
NZ_CP015098.1\|WP_062929878.1\|7224835_7225948_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP015098.1\|WP_062929882.1\|7231210_7232467_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|310523
NZ_CP015098.1\|WP_062929893.1\|7250836_7252621_+\|glyoxylate-carboligase	unknown	unknown	gnl\|CDD\|183066
NZ_CP015098.1\|WP_062929883.1\|7232504_7233536_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP015098.1\|WP_062929894.1\|7253491_7253728_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015098.1\|WP_062929879.1\|7226737_7227739_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187566

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062929887.1\|7240668_7241460_-\|serine-protease	gnl\|CDD\|238113	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.	1.87063e-72
NZ_CP015098.1\|WP_062931684.1\|7229796_7230366_-\|cysteine-hydrolase	gnl\|CDD\|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	8.00724e-36
NZ_CP015098.1\|WP_062929891.1\|7247345_7248932_+\|AMP-binding-protein	gnl\|CDD\|236236	PRK08315, PRK08315, AMP-binding domain protein; Validated.	0
NZ_CP015098.1\|WP_062929892.1\|7248955_7249462_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.40603e-13
NZ_CP015098.1\|WP_062929895.1\|7254034_7255492_-\|catalase	gnl\|CDD\|163712	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.	0
NZ_CP015098.1\|WP_062929880.1\|7227864_7228596_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	1.09957e-18
NZ_CP015098.1\|WP_062929889.1\|7244720_7245545_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.7874e-12
NZ_CP015098.1\|WP_062929877.1\|7224107_7224833_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.47242e-91
NZ_CP015098.1\|WP_062929886.1\|7239452_7240568_+\|AlkZ-family-DNA-glycosylase	gnl\|CDD\|377630	pfam06224, HTH_42, Winged helix DNA-binding domain. This family contains two copies of a winged helix domain.	6.6959e-62
NZ_CP015098.1\|WP_062929888.1\|7241663_7244516_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	2.04444e-20
NZ_CP015098.1\|WP_062929890.1\|7245669_7247349_+\|AMP-binding-protein	gnl\|CDD\|341278	cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS). MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.	0
NZ_CP015098.1\|WP_062929885.1\|7234627_7239031_+\|AAA-family-ATPase	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.64096e-09
NZ_CP015098.1\|WP_062929881.1\|7228857_7229742_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.12927e-13
NZ_CP015098.1\|WP_062929878.1\|7224835_7225948_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.12788e-51
NZ_CP015098.1\|WP_062929882.1\|7231210_7232467_+\|alpha/beta-hydrolase	gnl\|CDD\|310523	pfam05990, DUF900, Alpha/beta hydrolase of unknown function (DUF900). This family consists of several hypothetical proteins of unknown function mostly found in Rhizobium species. Members of this family have an alpha/beta hydrolase fold.	1.11023e-58
NZ_CP015098.1\|WP_062929893.1\|7250836_7252621_+\|glyoxylate-carboligase	gnl\|CDD\|183066	PRK11269, PRK11269, glyoxylate carboligase; Provisional.	0
NZ_CP015098.1\|WP_062929883.1\|7232504_7233536_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	7.68431e-19
NZ_CP015098.1\|WP_062929879.1\|7226737_7227739_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.04628e-72

>NZ_CP015098.1|WP_062929885.1|7234627_7239031_+|AAA-family-ATPase
MAESSPGRDVTEDDVLNLLRSAPSTGALPGADDAGPRRWALREKTALVSAFDAAELEEDGPGEHTAEAALREFLSHDCERVTTRQGRRWRLLPAARTTTLERLGTPDRLLAALRSGAGTGQDTARDCAERLLTGTARPLGELRLEELHAALTVAGWLDDAPRARAALAARSLTLPGTQDISRHIELARLFQPLDALADATFCGRERELGELARHVRTGADGPPGRPPWLLIHGPGGVGKSTLVARFVLDGVTRARPSHGRPYAYLPFDRTDLVPEQPLTVLGEMLRQLPILLPALDGPAVPELQGAVRTTLEADSRAESELRGTRGPRTGRRSDETALVARFAHLVTGALRPGNRPVLLVLDTFEQAQRKGAFTLARLLDFLEVLQDLCPWLRIIAAGRAPVDDGRFAHVPLEGFDPATAESYLRRLLPGGGREYEAALQTVIRTVGSDPLSLKLAADLFRREGPQALRDASLRRQVQLRLQPEERQGILYRRILDHLDDPGLRRIASPGLTVRRVTPDVIRHVLAGPCGLGEVDERRARTLFRRLREEAALVEETPGREAVVHRADVRRVMLPMLRGEGRTLVHRIHRKAVAYYADLAERDPVNAVEHRAEELYHRLCLGQSARTLDRRWLSGAGQLLDSALEELPVRGRIYLSERLGITVAPDLLRQADDDTWARQALRAGTACLAEGRAEETLLLLDERPDHVGGDVELAALRIRALTVLGRMVEARELVEPALELASRLSDARGFVEIAVSGARIDEDLGRFGAARALLRQARRAAEPPGLGEALPLSVAVAELRLHRREDRADSVEARRLRDEVVERVSRLGSRERARHPALVRELAAEVGDHVPELVSQAARLLGVDVQGAAGKILRTSLSDDDVRDLAEVTRAAKKEPAARREDDDEADTGQEDNSSTWLAGHNSTVRGEVVGAYIDSRAERQPSWHHALVNTYQYEVDQASYTRSRSGSRPGSAVPMPGAGRDAVVVVPGFMGSALEDTDSGRRLWGHDAIAGLLDVWWRNGARALELTADERAGDTRRVRPGGLLRTPAWAPLFGGLEPYGRLLRTVRDSVVHPDAVLEFSYDWRLSAAHNAALLTQAATRHLERWRAHPEVARTGGGAGYDAREPRLVFVAHSTGGLVVRAAMARGLAEVTRQVLCLGTPFRGVPKALEVLRPYRNSGPAAVPSLALRQIMRTLPGFYDLLPDYRCVEHHDGEVRRLELDDIGWLGGDTALARDAMRTRRDTDAASLVSPVQAVVGSGQPTVQSVRLRSDGTVLPLLSSVRMHNDGEPVRDQHGNLSRWDLGGDGVVPCRSASSPTRGDFFVPVQYGALTTHRTVLTWVRDMLSEGHVAEAAPGSSGRGLARALPDDGGIGLPSSDRHELSLSLSDVVEAGQRCMIQVRGARSQVPVRCDHIDGLSPSIVAVVRRYDDEDVVAEVTFPAPGLYRVTVEEGNRSAGQVVLVVDPEDGD
>NZ_CP015098.1|WP_062929884.1|7233540_7234635_+|hypothetical-protein
MALLLDQTVFAFDDAQARELLDVLLKVHDREASVRQFVAAVGLLPAAIEWRGPLTDIWPRVLEHAACARKLRQLIQVVAHHPNSAEYDIFKVLLSQEPPAKETDPCAALLVGGGRTRAFIDRGELRATLREMLDAPGGRVLIVDGDRRCGKTWTWFLLCHVLGNRRITPYKIDLSAYVPPVEVSDIAAALTDQLGWDLGHGDPYASEATHVRRLVNVAKRHMRALSEDHWLVFDGMVGTALTPSALRMVEGLAEAVVDGETGDRLNMVLIAYDGQLQPSADPYVWRTRLGPIGVEHLHEFFCSIAASAGARIDPAVADLLVKEVLREATGGDHDPGLPLPLERISHVAALRGRQLYQMYGGTGG
>NZ_CP015098.1|WP_062929883.1|7232504_7233536_+|trypsin-like-peptidase-domain-containing-protein
MTHFLDRLPFEWSAPGARELQELLVSVYDEPMAVKAMAGKAGIVTWDVDWRQPVYGVWFDLIPAARNQGKLRALLSVIESGPDLAVAERLKELIGDRPVLEAPAADPPPGTWKDFSDPDPLERRIFSTDTFQDVAFLRRGTEQATAVCRLLVTDDRGRRYHGTAFRVSHDLLLTNHHVLCGGGTRPEQVDAWFGYEQDLDGRDLEHVSVACDPGSVVGDETDDWAVIKAAGPLPDDAVVIELPERAGLDVGDRLYIIQHPNGGVKKFAARHNVVRYVDDEIVQYWTDTDRGSSGSPVFDERWRLVALHRRWTRIGPLSAPAEYRNEGVRIERVAAGMAHAGLR
>NZ_CP015098.1|WP_062929882.1|7231210_7232467_+|alpha/beta-hydrolase
MHGADLERLESHVLTALRELDAVQHVSAAGGTEETPTPETYEAIDSAAREVALAFEAHAPLGAMLAAEFDALAARRERFGPAAPPPHWVAWQRSLLVPVLYATDRALDGKRAGFGAGRGELTYGEARVGIPDDHRMGAAEKSRVWRLRFRDDPARVATLGAVARSTAPEFTELTRKRLAECEVDQALLFVHGYNVPFRDAVMRAAQIAYDLNFTGVPLLYSWPSKGTVGGYVADENSVSRAVPYFQEFLRLVLTETNVSEVHVLAHSMGNRLLTEALADFDTTSLPEGSGRLGQVIFAAPDVDAEVFRRRLPRIARQAAGCTLYASSVDRALAASRTLAAAPRAGQAGAGIVVAPGLDTVDASALDTGLMGHSYVGDHTSVLADVYGLLRQALPPSRRFGLVSVPHADGSYWSFQPQK
>NZ_CP015098.1|WP_062931684.1|7229796_7230366_-|cysteine-hydrolase
MERGADPARSALILIDMINTYDHEDAELLVPSVEGILPVLTELLGRAREADVPVIYVNDNSGLWRSHHGELLDAALSQPNAHLIEPIRPDDRSLFVMKARHSVFFETPLSYLLWSLDVGHVVLTGQVTEQCVLYSALDAHIRHLEVTVPKDAVASIHTHLASAALEMMERNMGARITTAKETEFEPHKT
>NZ_CP015098.1|WP_062929881.1|7228857_7229742_-|MarR-family-transcriptional-regulator
MTSEQVERVRRFNRTVAERVGVLHDHYLGGARPYGQARLLWQIGDGGTHDVRGVRERLGLDSGYVSRLLRALERDGLVTVEPHPLDRRVRTVRLTEAGQRERAFLDDRSDTLAASLLDPLDARQRERLTSAMAEVERLLTASVVSLEELGPDHPDAAHCLRSYAAELGELFDGGFDPANSLLPDPGELRAPRGLFLVARLHGEPVGCGGLKLPAGAPAEIKRLWVSPGTRGLGLARRLLSELEARAARHGRDRVRLDTNKALTAATRLYRDSGYTEVPAFNDEPYAHHWFEKRL
>NZ_CP015098.1|WP_062929880.1|7227864_7228596_+|flavodoxin-family-protein
MTAPSAPDAAHRFDDLTALYINCTLKPSPQRSHTQGLIDKSRSIMDNAGVTTELIRAVDHDIAPGVYPDMTEHGFATDVWPTLYERVMAADILVLAGPIWLGDNSSVTKQVIERLYACSSLLNPQGQYAYYGRVGGCLITGNEDGIKHCAMNVLYSLQHLGYTIPPQADAGWIGAAGPGPSYLDADSGGPENDFTNRNTSFMTWNLMHIAALLKRAGGVPAHGNQRSQWDAGCRPGADNPEHR
>NZ_CP015098.1|WP_062929879.1|7226737_7227739_-|NAD-dependent-epimerase/dehydratase-family-protein
MRVLVTGGAGFIGSHVVSALRERGHEAVVFDVREDPAADVRDTAAVRRALAGVDAVCHQAAKVGLGDGVADAADYVSHNDLGTAVLLAAMAEAGVRALVLAGSMVVYGEGRYACARHGVVRPGPRAVAELDAGRFEPPCPVCGDALSPGLVREDAPADPRNVYATTKLAQEHLAAAWARCTGGSAVSLRYHNVYGPGMPRDTPYAGVASFFRSALARGEAPRVFEDGRQRRDFVHVRDVAAANAVALEAAAAPGALTAFNTGSGDPHTVGEMARALAAAYGGPEPVVTGEYRLGDVRHITADSSRLRAELGWKPAVGFEEGMTEFARAGMRGA
>NZ_CP015098.1|WP_062929878.1|7224835_7225948_+|HAMP-domain-containing-histidine-kinase
MRDNLLIALYAFAGAAVTGLAGAGVLRLIRRRSLTVSLAVVAAVGVVAMLAGTLAVAWAMFLSPHDLTVVTTVVAMAAVVSLATALLLGRWVVARSRELAVAARSFGDGGDFAAPDGPATAELAAVSRELAATSARLAESRERERALETSRRELVAWISHDLRTPLAGLRAMSEALEDGVAADPNRYLRQMRTEVERLNDMVGDLFELSRIHAGALALTPTRISLYDLVGDALAGVDPLARAHGVRLVGGRVEPVPVEVDGKEMSRVLGNLLVNAIRRTPADGTVAIAAERSPEGVVLSVTDGCGGIPEEDLPRVFDTGWRGTHARTPPAGAGLGLAIVRGIVEAHQGRADVRNIPGGCRFEVVLPAAAS
>NZ_CP015098.1|WP_062929877.1|7224107_7224833_+|response-regulator-transcription-factor
MQQPYEPPDAAGRTPRILVVDDDPTVAEVVAGYLDRAGYAVDRADDGPSALARAAARRPDLVVLDLMLPGMDGLEVCRRIRGNGPLPVIMLTARGDEDDRILGLEVGADDYVTKPFSPRELVLRVESVLRRSRPATPGDRLGAAGLTVEPTARRVTKNGTELALTLREFDLLSFFLRHPGRAFGREDLMREVWGWDFGDLSTVTVHVRRLRGKVEDDPARPRLIQTVWGVGYRFEPGEGDD
>NZ_CP015098.1|WP_062929886.1|7239452_7240568_+|AlkZ-family-DNA-glycosylase
MTNTKRSVTGTAPLLGTRALNRATLDRQLLLRPARLSVAAAVEHLVGLQAQNVKPPYYALAARLDGFTPEALSRLMADREAVRIVTMRSTIHTHTADDCLTLRPLVQPARDRELVTFRKGLAGVDLERLAGLARDLVETEPRTMTQLREALLREWPDADPQALAVAARCRLPLVQVTPRGLWGRSGQVRLTTAEHWLGRPARPAPAPDAVVLRYLAAFGPASVKDMQAWAGMTRLRDAFERLRPRLVTFQDETGVELFDLPEAPRPDPETPAPPRFLPEFDNLLLSHADRTRVVPPEHRGRSWQGNLAHRTLLVDGFLAGLWRLEEDALVVEPFERLTRVQRDEVTAEGERMLRVMHPESSYDIRFGVVRG
>NZ_CP015098.1|WP_062929887.1|7240668_7241460_-|serine-protease
MFGLNAAKKAAAVAAATAAAATTALLAAPTAAAAPQPIVGGTTTTTSAYPFVMQITDASQNQFCGGTLVSPTKVVTAAHCMVGETTSSVRVVGGRTYLNGTNGTVSRVSKIWMHPSYTDVSNGDDVAVLTLSTSMPYTPAKYVSSSQTSVYAAGTTARILGWGDTSENGSASNQLRTATVPTVSDSSCASSYGSGFVRSDMVCAGKTSGGVDTCQGDSGGPLLIGGVLAGITSWGEGCAQAGYPGIYTRLTTFSSLVTTQVNS
>NZ_CP015098.1|WP_062929888.1|7241663_7244516_-|LuxR-family-transcriptional-regulator
MTVRRDFQEPPRSRPDLVIGREELFTSAREQLGRGGSVLLHGPAGIGKSTVLRALAADYGGAARTVLRCSATESESHLPFLALADLFGLVLEDVSGALPGAQRTALESALTGRGESTLQRDGLALRLAVLSALRALAAKGPVLVVADDLQWLDAASAELLGFAARRLGDTPVQMLCAVRTEGQEYDRHLPASPPDTLAVRLGPLNRTQVSALLDHRGYTPLSRSTIRDIHRTSGGNPLFALELGRALAESPARPRPGEPLPVPTSLRALVLSRLEMLSDEARRTLLVASAGARPTLALLHAAGREHAEAETAQAAALGLLATDPEAPALRFAHPLISAALYAEAPAQERRAVHAALSTAASDPIERARHLALATTGTDPDVAARLAEAGALARDRGAPSVAASLGLLAARHTPADSTPGPDERRLQAAEDAITAGEADLARDIARDVLTRATVPAERVRAWMVVIEAAGQALGEVDAVFPQVLADAGDDPRLLAQVYYQLAWRGLVVEGDFAEARQEAAHAAELAARGGDRRTELMALSFQASTETLMGHPDAPATVKRALKEPQDPYVACHHNGAGSARFRWLIMSDQLPEARATITALLREVRRRGMVESEVHFLRFLADTELRSGHCGRALDLARESLRLARDSGIGEGASAMLASLAEASAGDVDRALALAREAADHAEVDGDQMYLSRALAALGYAQLVAGDPAATVRSLRRVRELEQGLGINDPGRGRWHGDLAEALVRIGEPGEAQDVIDTTRAHALRLGRQSVLAVLDRAEALVRAARGEHEAAVVRLTSVQDRLGRLGYGLEEARAAFALARLRSQAAALPRTGARPLPGPPSYDEAARLFRRCRALPWLRQVDAAATAGPTAVGPPAATPAVALDALEGLAAMERQVASLVMEGATNREIAARLFISVKTVEATLTRVYRKLGIRSRVDIVRLAAGRRTT
>NZ_CP015098.1|WP_062929889.1|7244720_7245545_-|helix-turn-helix-transcriptional-regulator
MTTDASDAIEMRNALLRLRRGTGLPIAFGGLLEAGQQMRISELSGTATHALRSLVVTSGTGLGGKTVALSRPCVVTDYSASRQISHEYDAPVAAEGLRSVLAVPVVVRHRVRGVLYGALRTALPLGGRMLDAAVEAARDVERALVVRDEARTLVAGAGPGWEQVREAHAALRALAGRITDPGLRAELLGACALLAPEVAGSTAESAGSARVRLAPREVDVLACVAAGATNAVAADRLGVTPETVKGYLRSAMRKLRSRTRGEAVVAARRAGWLP
>NZ_CP015098.1|WP_062929890.1|7245669_7247349_+|AMP-binding-protein
MTSATALFRDARDFLLEHREDYPTAYEGFRWPRPEYFNWALDWFDEIADGNAGTALHLVEEDGRETRLSFGEMSVRSAQFATWLRARGVRAEDRILVMLGNQAELWITALAAMKLRAVVIPATPLLGPADLRDRVERGRVRHVIARTDDTGKFAEVPGDYTRIAADAAGAVPDGWLPLDDAYGASADFTPDGPTRADDPLMLYFTSGTTARPKLVEHTHTSYPIGHLSTMYWIGLKPGDVHLNISSPGWAKHAWSNLFAPWNAEATVFLHNYTRFDAVRLMTEMDRAGVTTFCAPPTVWRMLIQADLTQLRTPPREVVAAGEPLNPEVIEQVRRAWNLTIRDGFGQTETAVQVANSPGQPLKTGSMGRPSPGYRVELLDPVSGAPGAAEGEIALDLSDRPVGLMTGYHGDADRTAEAMAGGYYRTGDVASRDDEGYLTYIGRSDDVFKASDYKISPFELESALLEHDAVAEAAVVPAPDELRLAVPKAYVVLAAGWEPGADTAKVLFEHAREVLAPYKRIRRLEFGDLPKTVSGKIRRIELREATAAGSDAEYREEDFR
>NZ_CP015098.1|WP_062929891.1|7247345_7248932_+|AMP-binding-protein
MTSYSHGTGGTALLGDTIGANLDRAVAAWPDREALVDVPSGRRWTYAQFGAAVDELASALHASGVAKGDRVGIWAVNCPEWVLVQYATARIGAIMVNINPAYRTHEVAYVLKQAGVSLLFASLGHKTSDYRAMVGQVRGDCPELREVVYFGDPGWEALLGRATPDAAYDELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYSEQDRICIPVPFYHCFGMVMGNLAATSHGACMVIPAPSFDAKATLDAVQQERCTSLYGVPTMFIAELNLPDFASYDLSSLRTGIMAGSPCPVEVMKRVVAEMHMAEVSICYGMTETSPVSLQTRRDDDLEHRTGTVGRVLPHIEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAESVDAGRWMHTGDLAVMREDDYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIQDVQVVGVPHERYGEEVLACVIARDPDDPPTLEELRAFCEGQLAHYKVPARVRILDSFPMTVSGKVRKVELRERFAGG
>NZ_CP015098.1|WP_062929892.1|7248955_7249462_-|GNAT-family-N-acetyltransferase
MRIRPATPAELPALQDIERAAGTPFRDLGMPEIADDEPPALDVLEHYRRAGRCWVASGPQDRPVAYLLAEPVDGALHIEQVSVHPRAARRGVGRALLAHAADRAREEGLTSLTLTTFTDVPWNAPYYERLGFRPLPEEELTPGLRAIRATEAAHGLDRWPRVCMRAPL
>NZ_CP015098.1|WP_062929893.1|7250836_7252621_+|glyoxylate-carboligase
MARMTAARAAVEILKREGVADAFGVPGAAINPFYAALKASGGITHTLARHVEGASHMAEGYTRAHPGNIGVCIGTSGPAGTDMITGLYSATGDSIPILCITGQAPTAVIHKEDFQAVDIASIAKPVTKMAVTVLEAAQVPGVFQQAFHLMRSGRPGPVLIDLPIDVQLKEIEFDPETYEPLPVYKPAASRAQIEKAIGMLNASERPLIVAGGGIINADAAELLVEFAELTGTPVVPTLMGWGLLPDDHELNAGMVGLQTSHRYGNATFLESDFVLGIGNRWANRHTGKLDVYTAGRTFVHIDIEPTQIGRIFAPDYGIASDARAALELFVEVARELKAAGALPDRSVWAEAAQERKAALQRRTHFDDIPIKPQRVYEEMNKAFGPETRYVSTIGLSQIAGAQMLHVYRPRHWINCGQAGPLGWTIPAALGVAKADPEAPVVALSGDYDFQFMLEELAVGAQHRIPYVHVLVNNSYLGLIRQAQRAFEIDFQVNLEFENLNSPELGVYGVDHVKVAEGLGCKAIRVTYPAELGEAFEQARKLAAEHRVPVVVEAILERVTNISMSTTNDIGNVVEFEEIATEPGHAPTSIRTLKV
>NZ_CP015098.1|WP_062929894.1|7253491_7253728_-|hypothetical-protein
MAPPTEHPHVVVHAPALDGSRRVTLGEEPLGVATHADDVAEILRLADLYVTDVAESDLVEWQGGGPDDWPGLSEHHEA
>NZ_CP015098.1|WP_062929895.1|7254034_7255492_-|catalase
MSQRVLTTESGAPVADNQNSATAGVGGPLLLQDQHLLEKLARFNRERIPERVVHARGSGAYGHFEVTDDVTDFTQADFLSAVGKRTEVFVRFSTVADSLGGADAVRDPRGFAVKFYTEEGNYDLVGNNTPVFFIKDPIKFPDFIHSQKRDPFTGRQEPDNVWDFWAHSPEATHQVTWLMGDRGIPASYRHMNGYGSHTYQWTSSRGEAFFVKYHFKTNQGVRSLSSEQAAEIAGKDPNSHQTDLLQAIERGVHPSWTLHVQLMPAAEAADYRFNPFDLTKVWPHRDYPLRRVGRLVLDRNPDNVFAEVEQAAFSPNNFVPGIGPSPDKMLQGRLFAYADAHRYRLGVNHTLLAVNAPKATTAQNYGRDGLMAANPQGRHAKNYEPNSYDGPVETGRPLSAPLAVHGHTGTHEAPPHTKDDDFFQAGELFRLMSAEERSRLVANIAGGLSQVSRDDVIEKNLAHFHAADPEYGRRVEEAVRALRED

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Crispr_ID: NZ_CP015098_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015098_16

8184946-8185033

Orphan

Consensus_repeat	Method
GCAGCCCGGGTCACTTGTCGTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015098_16

>merge|NZ_CP015098|16|8184946-8185033|CRISPRCasFinder
GCAGCCCGGGTCACTTGTCGTCCCACGGCGCTTTCCGGGTCCGCCCGTCAGGGCGAAGAGGTGAAGCCGCCCGGGTCACTTGTCGTCC

>NZ_CP015098|16|15|8184946-8185033|CRISPRCasFinder
GCAGCCCGGGTCACTTGTCGTCC	CACGGCGCTTTCCGGGTCCGCCCGTCAGGGCGAAGAGGTGAA
GCCGCCCGGGTCACTTGTCGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015098.1\|WP_062930548.1\|8186818_8188207_+\|AbfB-domain-containing-protein	unknown	unknown	gnl\|CDD\|350097
NZ_CP015098.1\|WP_062930541.1\|8178101_8178632_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319805
NZ_CP015098.1\|WP_062930542.1\|8178977_8179940_-\|L-histidine-N(alpha)-methyltransferase	unknown	unknown	gnl\|CDD\|378355
NZ_CP015098.1\|WP_062930543.1\|8179936_8180731_-\|ergothioneine-biosynthesis-protein-EgtC	unknown	unknown	gnl\|CDD\|132483
NZ_CP015098.1\|WP_062930544.1\|8180730_8182068_-\|ergothioneine-biosynthesis-protein-EgtB	unknown	unknown	gnl\|CDD\|274581
NZ_CP015098.1\|WP_062930549.1\|8188355_8188868_+\|GPP34-family-phosphoprotein	unknown	unknown	gnl\|CDD\|377552
NZ_CP015098.1\|WP_033307910.1\|8178635_8178851_-\|dodecin-family-protein	unknown	unknown	gnl\|CDD\|377810
NZ_CP015098.1\|WP_062930551.1\|8191172_8192255_-\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176239
NZ_CP015098.1\|WP_062930553.1\|8193787_8194990_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379258
NZ_CP015098.1\|WP_062931748.1\|8183658_8184504_+\|TIGR02452-family-protein	unknown	unknown	gnl\|CDD\|131505
NZ_CP015098.1\|WP_062930540.1\|8177339_8177786_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|377315
NZ_CP015098.1\|WP_062930556.1\|8198206_8199280_+\|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380527
NZ_CP015098.1\|WP_062930539.1\|8175750_8177346_-\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|271374
NZ_CP015098.1\|WP_062930550.1\|8188837_8191039_-\|cytochrome-P450/oxidoreductase	unknown	unknown	gnl\|CDD\|99782
NZ_CP015098.1\|WP_062930552.1\|8192328_8193777_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|365919
NZ_CP015098.1\|WP_062930545.1\|8182064_8183366_-\|ergothioneine-biosynthesis-glutamate--cysteine-ligase-EgtA	unknown	unknown	gnl\|CDD\|274583
NZ_CP015098.1\|WP_062930547.1\|8185149_8186577_-\|amidase	unknown	unknown	gnl\|CDD\|235686
NZ_CP015098.1\|WP_062930554.1\|8195243_8196266_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176227
NZ_CP015098.1\|WP_062930546.1\|8184466_8184913_-\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|367091
NZ_CP015098.1\|WP_062930555.1\|8196262_8197642_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238623

Protein	Function_ID	Function_description	E-value
NZ_CP015098.1\|WP_062930548.1\|8186818_8188207_+\|AbfB-domain-containing-protein	gnl\|CDD\|350097	cd08983, GH43_Bt3655-like, Glycosyl hydrolase family 43 protein such as Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase Bt3655. This glycosyl hydrolase family 43 (GH43)-like family includes the characterized arabinofuranosidases (EC 3.2.1.55): Bacteroides thetaiotaomicron VPI-5482 (Bt3655;BT_3655) and Penicillium chrysogenum 31B Abf43B, as well as Bifidobacterium adolescentis ATCC 15703 beta-xylosidase (EC 3.2.1.37) BAD_1527. It belongs to the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	1.06643e-57
NZ_CP015098.1\|WP_062930541.1\|8178101_8178632_+\|hypothetical-protein	gnl\|CDD\|319805	cd07502, HAD_PNKP-C, C-terminal phosphatase domain of T4 polynucleotide kinase/phosphatase (PNKP) and related phosphatases. This family includes the C-terminal domain of the bifunctional enzyme T4 polynucleotide kinase/phosphatase, PNKP. The PNKP phosphatase domain can catalyze the hydrolytic removal of the 3'-phosphoryl of DNA, RNA and deoxynucleoside 3'-monophosphates. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.44148e-57
NZ_CP015098.1\|WP_062930542.1\|8178977_8179940_-\|L-histidine-N(alpha)-methyltransferase	gnl\|CDD\|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	2.70683e-159
NZ_CP015098.1\|WP_062930543.1\|8179936_8180731_-\|ergothioneine-biosynthesis-protein-EgtC	gnl\|CDD\|132483	TIGR03442, TIGR03442, ergothioneine biosynthesis protein EgtC. Members of this strictly bacterial protein family show similarity to class II glutamine amidotransferases (see pfam00310). They are distinguished by appearing in a genome context with, and usually adjacent to or between, members of families TIGR03438 (an uncharacterized methyltransferase) and TIGR03440 (an uncharacterized protein). [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.12497e-106
NZ_CP015098.1\|WP_062930544.1\|8180730_8182068_-\|ergothioneine-biosynthesis-protein-EgtB	gnl\|CDD\|274581	TIGR03440, egtB_TIGR03440, ergothioneine biosynthesis protein EgtB. Members of this family include EgtB, and enzyme of the ergothioneine biosynthesis, as found in numerous Actinobacteria. Characterized homologs to this family include a formylglycine-generating enzyme that serves as a maturase for an aerobic sulfatase (cf. the radical SAM enzymes that serve as anaerobic sulfatase maturases). [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.42048e-168
NZ_CP015098.1\|WP_062930549.1\|8188355_8188868_+\|GPP34-family-phosphoprotein	gnl\|CDD\|377552	pfam05719, GPP34, Golgi phosphoprotein 3 (GPP34). This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.	1.45858e-08
NZ_CP015098.1\|WP_033307910.1\|8178635_8178851_-\|dodecin-family-protein	gnl\|CDD\|377810	pfam07311, Dodecin, Dodecin. Dodecin is a flavin-binding protein,found in several bacteria and few archaea and represents a stand-alone version of the SHS2 domain. It most closely resembles the SHS2 domains of FtsA and Rpb7p, and represents a single domain small-molecule binding form.	1.02018e-33
NZ_CP015098.1\|WP_062930551.1\|8191172_8192255_-\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176239	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	2.8995e-169
NZ_CP015098.1\|WP_062930553.1\|8193787_8194990_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379258	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain. This helix-turn-helix domain is often found at the C-terminus of PucR-like transcriptional regulators such as Bacillus subtilis pucR and is likely to be DNA-binding.	1.78692e-14
NZ_CP015098.1\|WP_062931748.1\|8183658_8184504_+\|TIGR02452-family-protein	gnl\|CDD\|131505	TIGR02452, conserved_hypothetical_protein, TIGR02452 family protein. Members of this uncharacterized protein family are found in Streptomyces, Nostoc sp. PCC 7120, Clostridium acetobutylicum, Lactobacillus johnsonii NCC 533, Deinococcus radiodurans, and Pirellula sp. for a broad but sparse phylogenetic distibution that at least suggests lateral gene transfer.	1.0983e-121
NZ_CP015098.1\|WP_062930540.1\|8177339_8177786_-\|DUF485-domain-containing-protein	gnl\|CDD\|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	2.48217e-27
NZ_CP015098.1\|WP_062930556.1\|8198206_8199280_+\|BMP-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380527	cd06304, PBP1_BmpA_Med_PnrA-like, periplasmic binding component of a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. Periplasmic binding component of a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. These outer membrane proteins include Med, a cell-surface localized protein regulating the competence transcription factor gene comK in Bacillus subtilis, and PnrA, a periplasmic purine nucleoside binding protein of an ATP-binding cassette (ABC) transport system in Treponema pallidum. All contain the type 1 periplasmic sugar-binding protein-like fold.	8.19535e-32
NZ_CP015098.1\|WP_062930539.1\|8175750_8177346_-\|cation-acetate-symporter	gnl\|CDD\|271374	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	1.4453e-148
NZ_CP015098.1\|WP_062930550.1\|8188837_8191039_-\|cytochrome-P450/oxidoreductase	gnl\|CDD\|99782	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster. PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur [2Fe-2S] cluster domain. Although structurally homologous to FNR, PDR binds FMN rather than FAD in it's FNR-like domain. Electron transfer between pyrimidines and iron-sulfur clusters (Rieske center [2Fe-2S]) or heme groups is mediated by flavins in respiration, photosynthesis, and oxygenase systems. Type I dioxygenase systems, including the hydroxylate phthalate system, have 2 components, a monomeric reductase consisting of a flavin and a 2Fe-2S center and a multimeric oxygenase. In contrast to other Rieske dioxygenases the ferredoxin like domain is C-, not N-terminal.	1.49843e-88
NZ_CP015098.1\|WP_062930552.1\|8192328_8193777_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	0
NZ_CP015098.1\|WP_062930545.1\|8182064_8183366_-\|ergothioneine-biosynthesis-glutamate--cysteine-ligase-EgtA	gnl\|CDD\|274583	TIGR03444, EgtA_Cys_ligase, ergothioneine biosynthesis glutamate--cysteine ligase EgtA. Members of this bacterial protein family, EgtA, resemble the glutamate--cysteine ligase of the two-step pathway for glutathione (GSH) biosynthesis, but instead are involved in the biosynthesis of the histidine-derived thiol, ergothioneine (EGT). Successful in vitro reconstitution of EGT biosynthesis using EgtBCDE and gamma-L-glutamyl-L-cysteine suggests that this enzyme is a bone fide glutamate--cysteine ligase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.09286e-141
NZ_CP015098.1\|WP_062930547.1\|8185149_8186577_-\|amidase	gnl\|CDD\|235686	PRK06061, PRK06061, amidase; Provisional.	0
NZ_CP015098.1\|WP_062930554.1\|8195243_8196266_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176227	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.30961e-88
NZ_CP015098.1\|WP_062930546.1\|8184466_8184913_-\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	7.07606e-14
NZ_CP015098.1\|WP_062930555.1\|8196262_8197642_+\|amidohydrolase-family-protein	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	1.42682e-76

>NZ_CP015098.1|WP_062930546.1|8184466_8184913_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MSTFADENVPGRHGPSATVQADPREVGRVRTEYSPAHDGDPDPGEIVWTWVPYEENDGRGKDRPVLVVAREAGGTVLAVRLSSKRHDGDREWVPIGSGPWDRTGRDSWVDVDRVLRLHEAGMRREACALDRMRFNLVRRRLQERYGWC
>NZ_CP015098.1|WP_062931748.1|8183658_8184504_+|TIGR02452-family-protein
MSARLRGIAQQTEQIVAAGCYRAPNGREVSIAAELRAAREGTRLYGPEPVPVSADRVTGTRETLVEVTDESSLAAARRLGGHVAVLNFASARNPGGGYLNGAQAQEEALCRASALYTCLLEARAFYDHHRAHRDPFYTDRVIHSPAVPVFRDDRGALLAEPWTAGFLTSPAPNAGVVLRTAPERASELPRALAVRAGRVLETAAAHGYRRLVLGAWGCGVFRNDPAQVAEAFRALLGPGGRFAGAFEHVTFGILDRTPSRAVLGAFQETFSTSRSVPAAGV
>NZ_CP015098.1|WP_062930545.1|8182064_8183366_-|ergothioneine-biosynthesis-glutamate--cysteine-ligase-EgtA
MSDSVRGCTRPRTSMSEAEVEALVRGICFKTGPPRRLGVEVEWLVHELRAPQLPVTPERLEAAYAALRTVPLRSALTVEPGGQLELSSPPADSLTECIGTVSADLDAVRAVLRDDGLALVGLGQDPWHEPRRFLRQPRYDAMEACLDRTGPAGRAMMCTSASVQVCLDAGHEEPGPLGLVRRWWLAHHLGAVLVAAFANSPLAGHRPTGWLSTRQLMWTRIGAGRAGGPRLDTDPRGAWARHVLDSPVMCVRRDRGPWDLPEGLTFRDWIRTGAPRPPTREDLDYHVTTLFPPVRPRGHLELRMIDAQPGDDGWIVPLAVTAALFDDPEATETAYRAVKPLAERTLGLPAPHNPLWLDAARGGLVDAELREVAVTCFTTALDALPRLGAAPEVIEAVTAFLDRYVVLGRCPADDLLDRQRGTDGRAHGKDFRP
>NZ_CP015098.1|WP_062930544.1|8180730_8182068_-|ergothioneine-biosynthesis-protein-EgtB
MTDTEPAVDAQAVDPEVLRERAVASLVVARDRTTLLTSCVEDPDLTAQHSPLMSPLVWDLAHIGNQEEQWLLRAVAGHEAIRPEIDGLYDAFEHPRAERPKLPLLSPAEARTYAADVRGRALDVLERAAFHGTRLTEAGFAFGMIAQHEQQHDETMLITHQLRTGPQALTAPDPEPVPLFTGPAEVLVPGGPFTMGTSGEPWALDNERPAHRREVAPFRIDTTPVTNGAYRAFIEDGGYDDPRWWAPEGWAHIRRHGIEAPLFWRRDGTQFLRRRFGVTEVVPPDEPVLHVCWYEADAYARWAGRRLPTEAEWEKAARHDPAGDRSMRYPWGDADPGPEHANLGQRHLRPAPAGSYPAGESPLGVRQLIGDVWEWTASDFLPYPGFRAFPYREYSEVFFGSDHKVLRGGSFAVDAVACRGTFRNWDYPIRRQIFAGFRTARSEDA
>NZ_CP015098.1|WP_062930543.1|8179936_8180731_-|ergothioneine-biosynthesis-protein-EgtC
MCRHVAYVGPAVPLGRLLVEPPHGLYRQSWAPRHQQYGTVNADGFGVGWYAEGDPVPARYRRAGPVWADLSFADLARVVKSTALLAAVRDATLSGADAEAAAAPFAAGAWLFSHNGAVRGWPGSLATVSRTLPHEDLLSLEARNDSALVWALVLARLRSGDEEGQAMADTVLEVAAAAPGSRLNLLLTNGDTITATAWGDTLWYLTRPGGGTVVASEPYDDDPHWREVPDRTLLAASRTDVLLTPLKEPSDASVPSPSPKEPRT
>NZ_CP015098.1|WP_062930542.1|8178977_8179940_-|L-histidine-N(alpha)-methyltransferase
MSPFHLTRTLPEDATDAALRADVHRGLTGRPKTLPPKWFYDAHGSDLFEKITELPEYYPTRAEREILQARAGDIAAATRARTLVELGSGSSEKTRHLIDALTELHTYVPVDVSESALSQAGQALAAERPGLDVHALIADFTAELTLPDTPGPRLVAFLGGTIGNLLPAERAAFLASVRALLAPGDALLLGTDLVKDEEALVRAYDDGAGVTAAFNKNVLAVINRELGADFEPAAFDHVAVWDAGHEWIEMRLRSRTAQTVKVPALDLAVDFAAGEEMRTEVSTKFRQEGVRTELSAAGLELAHWWTDDAGRFALSLSVAR
>NZ_CP015098.1|WP_033307910.1|8178635_8178851_-|dodecin-family-protein
MSNHTYRVTEIVGTSPDGVDQAIRNGIDRASQTLRNLDWFEVTQVRGQLEDGQIAHWQVGLKVGFRLDESE
>NZ_CP015098.1|WP_062930541.1|8178101_8178632_+|hypothetical-protein
MRPAQGPLTLGGVSDDRSKAPLAVFDLDNTLADTTHRQRFLERRPKDWDGFFSAAPQDPPVPEGIALVQESARECEIVYLTGRPERCRRDTLDWLAAQGLPEGRVHMRRDADRRPARFTKLEILRRLARTREIRVLVDDDELVCADARRAGFTVVRADWVTRSAEMKAAQEREGRT
>NZ_CP015098.1|WP_062930540.1|8177339_8177786_-|DUF485-domain-containing-protein
MPEYSPRRDDTPTFPLPHIEHTPQSHISDHPEFHSLRRAQRRFGIRATVLSVGGFLLYVVLSSFVPAVMNQPLFGRLTVGLTLGLGQFVIMGVTAWCYVRHMRTRVDPLARGLRSRLHETESRRARTTVPPQGAGQPLRHGTRGFRTW
>NZ_CP015098.1|WP_062930539.1|8175750_8177346_-|cation-acetate-symporter
MVTAAAIDDSSLQLTFVLFLTVVVITLFTALLTAPQRDEISEFYLGNRAMSPLRNGLAMCGDYLSAATLLGSTGLVALTGYDGLMYLGGTTVAWMMVLLLIAEPLHRTGRFTLGDTVALRLPRQQRPVRVALSVCILAIATLYLVAQLVGSVALLTQFTGVPSGSTRTLCVVVIGAFVILYASLGGMPGATVIQIIKAVMLVVGVLFTAGWVLHHFDWNPNALLERASERSGSGLSFLEPGLRYGGTVSNKLDFLSLELAIVLGLAALPHVLMRLLTPRNSGVLRSSVLWAVGLVGAVCFGAGIMGLGATALLGRDTIESTDRTGNASVLLLAHELGGSVLTALLTCLAYLTLLAVAVGLTLAAASSLAHDLYSEVIRKGRASETEELTVARLSGVVIGVLGILLALVAWGANTATLAFLAFAIAASAILPTIIYTLFWRRFSAKGALLSLYGGLLCSVLLAAFSPVVSSAPGSFYPEADFAWFPLQNPGIVSIPVGFLLGWLGTVLDKGPAEEASAHEEFEVRMLVGADD
>NZ_CP015098.1|WP_062930547.1|8185149_8186577_-|amidase
MVLDRSEGLVETARALAAGEVTSRALVERTLARIEASQGSLNAFRIVRAEAALAEADAADRQLASPGARRPLLGVPVAVKDDMDVAGEPTAFGCCGEFPPVAEDGEAVRRLRAAGAVIIGKTNTCEFGQWPFTEGPAFGATRNPWSTEHTPGGSSGGSAAAVAAGLVPAALGSDGAGSVRIPAAWTHLVGIKPQRGRVSTWPRGESFQGITVNGTLARTVADAALLLDAASGNHAQDPHRPPALDVSGAVGRDPGRLRIALSLKPPFTAVPARLLPEVRTRVVELAERLAALGHFVEEADPPYGQIGLTFVPRATAGIAERVGEAPFPALLDRRTRDAARLGRLLGGAPLRAARRAETALHRRIGSFFTSYDVVLAPTTAAPPPRIGALLELSGFATDRAMIAACPYAWPWNVLGWPGVNVPAGFTPDGLPVGAQLLGPAHSEPLLVQVAAQLEAELRWAEKWPSPPVTARSAAA
>NZ_CP015098.1|WP_062930548.1|8186818_8188207_+|AbfB-domain-containing-protein
MTSHPATPSRRTLLRALAALPASAVLLGETPGLLGTALAAAPPNGSATRYTIVPFLNSNDGTVNVYQSDDATDFRLLRSSAYTPPANRIRDASVIRHTDGYYYVTYTTHTWQDPSTTIGFARSSDRVNWTFLYDYTVPVSRLSRAWAPEWFVDSDGSVSIIVSCSTTNDEWIFTPYLLRATNSALTAWSSPVALSGIGANHIDTFIVKTGSTYHAFPKNETTKYIEYATASNLTGPYTIRRTGDWAGWGSYREGPALVRLDNDGWRIFFDGYGDGNYYYSDSYDTFATWSAPAALPAISGTARHFTVVKETVSGGPALARNVTRSFRSANYSTRYWQQQSSLLNLPVVSASSTTAAKQAATFTVVAGLADGSGCSFRDAAGNYLRHWDFRARFDPNDGTSTFAKDATFILRAGTASGSVRFESYNYPGRYLRHYAYQLRVERSDGTDLFRQDSSFVPVTPWA
>NZ_CP015098.1|WP_062930549.1|8188355_8188868_+|GPP34-family-phosphoprotein
MTAGATTSLARDFMLAVYLDGRGRVPSHRTGLNFGLSGAVLMEPALGGFIRIVDGHAVAVDGAQPRDRVLREVLVRIRVTHTGAELREKSHSFASRHTAHPEVATEAGWQRVRANLCLGPWSSSTAAIPGAGSRALAGPAARAVPGSGDRPRNALRKPTGAQRSSTSRSP
>NZ_CP015098.1|WP_062930550.1|8188837_8191039_-|cytochrome-P450/oxidoreductase
MSADIDFDHHSDEANADPVAYYARFRETCPVGRSDAHGGFHYTTRYADVARVARDDATFSSARSDHGGQGVGIVIPKGPGLEQYPIELDPPRSTEYRQLINPLLTPEAVEQLVPMIERHAARVVDDFVELGSCDFVRDLTNPLPAAVTLDWLGFPEEDWAKLAGPIHDIFAAPAGSDRAVRGAAGLAYMDRRIRELIAERRSAPRADAVSTLVGGRRADGGEFGEDELVSVIGLLIAGGVDTTTSLTGSTLVHLARHPEQRQRLIDSPDLLDTATEEFLRAFAPSQSMARTVTRDVEVGGCPMRSGDRVLIPWVAANHDPAVFPDPEQVRLDRDAGRHLSFGIGSHRCAGAHLARAMFRAMMSQVLTRLPDYRVIEEGLVPYPTRGNQSGWDAVPALFTPGPRATTAAGRVRTLTTPTPLRVTAMRAAAEGVLAVDLCLPDGGELPAWRPGAHIELRLPSGRLRQYSLCGDPADVTTWRIGVLREAQGRGGSAELHQLARPGVTFSVRGPRNHFPLMEAPSYLFLAGGIGITPILAMVREASGRGTPFTVVYGGRTRSTMAFADELAAVAGDALTLLPQDEAGLPDLPRLLGGLDADTAVYACGPGPMLAAVERECARLDLTDRLHLERFAGGDNLETVFDAAQNRPFEVQLARAGTTLAVPADRRLIEVLRDAVSGLSYDCEKGYCGACETRVLAGTPEHRDSVLSDEERLAGRTMMVCVGRCQGDRLVLDL
>NZ_CP015098.1|WP_062930551.1|8191172_8192255_-|NAD(P)-dependent-alcohol-dehydrogenase
MRATAALLEQPGEPFVLTEVDLDEPRPDEVLVRVAGVGICGTDLEFAGFFPTPALLGHEGSGIVEKVGAHVTSVRPGDAVAMSFASCGTCALCRTGSPAYCRSFDAVNFSGRRPDGSTAVTHEGREVNAHFLGQSSFASHVVAPERAVVKIDPSLDLLRAGPFGCGFQTGAGGVLNVLQPRPGSSIAVFGAGAVGVAAIIAASLSGCEVVVAVDVNPAKLEAARGFGATHAVDSSAGAVAGQLAALVPQGFDFVVDTTGREDVLRTAVEALGPLGRAGVIGIGPSESMSFEWRSILNGRTVTGIIAGSSLPQLFLPRLLELNARGRFPVEKMISYFPFEQINDAVAAVRSGSVGKAVLTF
>NZ_CP015098.1|WP_062930552.1|8192328_8193777_+|aldehyde-dehydrogenase-family-protein
MASVDFPPYQHFVDGKWVAARDGGTLDIVDPATRQVITKVARAGAADVDDAVAAARRAFPAWAATNPSERGALIRRWADLIIAEVEALAAVEAQDVGKPLSGGRTNIYIAHGIIDYFAGAADKLTGVTLPTRSPDYLGYTVPEPYGVCAVVIPWNVPAVLTAANVAPALAAGNTVVLKPSEIAPLAPFALVELARRAGFPPGVINVVAGLGPEAGVALTSHPDVDHISFVGSTGTGRAIMSAAAQNLVPVKLELGGKSPNVLFADADLDTAIPAIVASITENAGQNCYAGSRLLVQASVHDEVVERVAAAMAAIRTGPWEADLEMGPLVSAAQFARVSGFLKDARREGARLVTGGAPVGDGWFVRPTVYDRVDADMRVAREEIFGPVLAVQSFRDTAEATEQMNATDFGLLACIWTNDVSRALRLAKDARSGQVAVNQFHDAGVIGFPFNMQKDSGFSRGGGYTALREYTQEKGVAIRLLAR
>NZ_CP015098.1|WP_062930553.1|8193787_8194990_+|helix-turn-helix-domain-containing-protein
METITGARSEPARDGTGPDASAAALERELTEAVLAGAGCSDVLHALRRATGRQVRLLSVAGAPLASTDGGAGVPAAVAAGVLADATGPVVDTLDGLRATALPVRAGATVAGVLLTVGPGDPRVRSLTGAAVTPLLIDAVRARDGSAQVSSQHTPADVVAALRSGTVSPSVCAAAAGLGIDLQSPPAGAVLHYSGSRLRAWRTALSWLEHPVQQEGRTAWTVVPDEFALARLRNRLRLMTGGDDPADHVVAASGSHPGSSPGLARSFDEAERLLGLARTRMVPLLTFDRCGVVQVLLPLPRAQLEAFAEAHLGPICQRPELMATLRAWLAERGSRQSVSRQLHLHRNSVGYRVRQIKNLLGTDPLLPTASAELHLALAALDLLAADDLRLRGDDEPVPAGR
>NZ_CP015098.1|WP_062930554.1|8195243_8196266_+|zinc-binding-dehydrogenase
MVQTDFGGPEAVSLQDVPEPVCGPRDVVVEVAHCGLNRLDLLQRKGPGLIPGFRLPHVPGMDFAGTVVATGSAVSSVVPGDRVIADPTQGCGSCPLCAVGDRAYCPSPRVLGGNAPGALAEYVLASAESIVQVPESLPLAAAVTLPTAAATAWHAVHTVGSLAAGETLVVHAGASAVSLAAIALAKRAGASVVAFAGSAAKRDAARAAGADLVLPNGDRDAVKTVSDFTDGAGADLVLDHVGTETWRTSLDCLGIRGRLLLMGNTSGDQVAFSLQEVFHRGLKLLGAGGYSSADFVAATSACFADGLHLPTAARFPLEDLADAWDVLAARETIGKVVIEP
>NZ_CP015098.1|WP_062930555.1|8196262_8197642_+|amidohydrolase-family-protein
MTDLLIVGGDVVTMDSARRVLTGAAVAVSGNSIAALGTAQDLRARFPGAREIDASGCVVIPGLVDAHQHTTVDPLVRSMIPDHIGSQESIFDWIVPLHAHADGDDDELAATVTAVDCLSRGITTVLEPGTVAYPERVAAGLGSAGIRARVGGWGWDAEGVPFGAPAGEVLARQEDIVRSLPATGPVTGWVTLVGHDLASDDLFAGAASLAERLDVGLTWHISPGPADVEAYALRCARRPLVHFRELGVLGPRLLLGHAVWLDDAEVDAILETGTAVAACPGAYLRLAQGYTRASRHAELVRRGGRVALGCDAHNAGDGPDVLLAAYLFAGLERDRDLPDPVRAEQAFALATIDGARAIGLGDRIGSLEVGKAADIVVLDTRDPAWTPRGDLARQLVWGHVSRTVRDVLVDGRVVVRDRRPTGVDLTTVAEAAAERSTALLRRAGITPRPTWPTEPAAGR
>NZ_CP015098.1|WP_062930556.1|8198206_8199280_+|BMP-family-ABC-transporter-substrate-binding-protein
MLWRRRAAAGLALVGALALSGCAGNAATASQATPAASGGSDSALKEPDVNGDGKVVVGVLSPGDINDHGYYQSFVDSADAFAKEKGWTIIKRGSVPPSDALTAARAMCQQHVDLVALGASELKTAIPASEEPVCSKTAWYLPSASGTDTHPRVLLSADDPNQSLLAAGYAAGLKMKAAGYTKAGFITGNKAEFSVAAAKAFQAGIREVVPKATVTSTYTGDFNDSAKAKEATQAQISQGIKVIYPYLGGATDAAAQLANAGGALTLTPGTDRCDSTSPKYDISVVFSPGDYFRAALEEFAKGNLKMGTTRVWKLGVDPYPTVRICRSEGDEAKRLDEFMKKIGTDKIDPAAEVKRLG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP015098_7	7.3\|4287241\|17\|NZ_CP015098\|CRISPRCasFinder	4287241-4287257	17	NZ_CP015098.1	9022573-9022589	1	0.941
NZ_CP015098_7	7.3\|4287241\|17\|NZ_CP015098\|CRISPRCasFinder	4287241-4287257	17	NZ_CP015098.1	7118048-7118064	1	0.941
NZ_CP015098_15	15.1\|7239349\|30\|NZ_CP015098\|CRISPRCasFinder	7239349-7239378	30	NZ_CP015098.1	7239406-7239435	2	0.933

1. spacer 7.3|4287241|17|NZ_CP015098|CRISPRCasFinder matches to position: 9022573-9022589, mismatch: 1, identity: 0.941

agcacgacgtgcccacc	CRISPR spacer
agcacggcgtgcccacc	Protospacer
******.**********

2. spacer 7.3|4287241|17|NZ_CP015098|CRISPRCasFinder matches to position: 7118048-7118064, mismatch: 1, identity: 0.941

agcacgacgtgcccacc	CRISPR spacer
agcaggacgtgcccacc	Protospacer
**** ************

3. spacer 15.1|7239349|30|NZ_CP015098|CRISPRCasFinder matches to position: 7239406-7239435, mismatch: 2, identity: 0.933

ggagttgcgaacagaacctgtccgcaagtg	CRISPR spacer
ggagtcgcggacagaacctgtccgcaagtg	Protospacer
*****.***.********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	457063-457086	2	0.917
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP047174	Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence	36882-36905	2	0.917
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP047175	Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence	126277-126300	2	0.917
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NZ_CP013255	Kocuria flava strain HO-9041 plasmid 1, complete sequence	45288-45314	3	0.889
NZ_CP015098_4	4.2\|2810306\|27\|NZ_CP015098\|CRISPRCasFinder	2810306-2810332	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4623416-4623442	3	0.889
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	96305-96328	3	0.875
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	145726-145749	3	0.875
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_LR134455	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence	25621-25644	3	0.875
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP015008	Aminobacter aminovorans strain KCTC 2477 plasmid pAA03, complete sequence	103044-103067	3	0.875
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1129714-1129737	3	0.875
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP011523	Streptomyces sp. CFMR 7 strain CFMR-7 plasmid unnamed, complete sequence	1317-1340	3	0.875
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	160215-160238	3	0.875
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1114383-1114406	3	0.875
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	JX100810	Caulobacter phage CcrColossus, complete genome	160311-160334	3	0.875
NZ_CP015098_4	4.2\|2810306\|27\|NZ_CP015098\|CRISPRCasFinder	2810306-2810332	27	NZ_CP014208	Pantoea ananatis strain R100 plasmid, complete sequence	123622-123648	4	0.852
NZ_CP015098_4	4.2\|2810306\|27\|NZ_CP015098\|CRISPRCasFinder	2810306-2810332	27	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	908089-908115	4	0.852
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	144584-144607	4	0.833
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	317502-317525	4	0.833
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	187451-187474	4	0.833
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	254634-254657	4	0.833
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	300829-300852	4	0.833
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	222601-222624	4	0.833
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	338592-338615	4	0.833
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	1382150-1382173	4	0.833
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	KY092482	Streptomyces phage Mojorita, complete genome	35976-35999	4	0.833
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1443647-1443675	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	989518-989546	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	868918-868946	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	632175-632203	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1682292-1682320	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1464427-1464455	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1860770-1860798	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1835284-1835312	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	800345-800373	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	781426-781454	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	912401-912429	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1302826-1302854	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	772242-772270	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	772242-772270	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1186387-1186415	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1802932-1802960	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1254814-1254842	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1272620-1272648	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1442181-1442209	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1011887-1011915	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1578093-1578121	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1187269-1187297	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1697766-1697794	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1263457-1263485	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1371535-1371563	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	977425-977453	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1192357-1192385	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1227495-1227523	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1189100-1189128	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1374983-1375011	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1157958-1157986	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1263446-1263474	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1374950-1374978	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1245156-1245184	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1272762-1272790	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1373755-1373783	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1167828-1167856	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1245156-1245184	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1272762-1272790	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1373792-1373820	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1245156-1245184	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1167851-1167879	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1245160-1245188	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1272762-1272790	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1272762-1272790	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1272762-1272790	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1373792-1373820	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1373781-1373809	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1167851-1167879	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1185361-1185389	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1166026-1166054	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1213702-1213730	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1260139-1260167	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1373781-1373809	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1167851-1167879	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1245155-1245183	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1374948-1374976	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1167851-1167879	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1167851-1167879	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1373792-1373820	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1272763-1272791	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1373803-1373831	5	0.828
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1373781-1373809	5	0.828
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NZ_CP014516	Frondihabitans sp. PAMC 28766 strain SR6 plasmid 3, complete sequence	43912-43938	5	0.815
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	384336-384362	5	0.815
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NZ_AP018921	Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence	206188-206214	5	0.815
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	MN234196	Gordonia phage CloverMinnie, complete genome	33046-33072	5	0.815
NZ_CP015098_4	4.3\|2810360\|27\|NZ_CP015098\|CRISPRCasFinder	2810360-2810386	27	MK937607	Gordonia phage Zipp, complete genome	41204-41230	5	0.815
NZ_CP015098_4	4.3\|2810360\|27\|NZ_CP015098\|CRISPRCasFinder	2810360-2810386	27	MK937611	Gordonia phage Verity, complete genome	41289-41315	5	0.815
NZ_CP015098_7	7.1\|4287145\|25\|NZ_CP015098\|CRISPRCasFinder	4287145-4287169	25	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	769334-769358	5	0.8
NZ_CP015098_11	11.1\|4849375\|29\|NZ_CP015098\|CRISPRCasFinder	4849375-4849403	29	NC_015685	Oligotropha carboxidovorans OM5 plasmid pOC167, complete sequence	131406-131434	5	0.828
NZ_CP015098_13	13.1\|5936227\|24\|NZ_CP015098\|PILER-CR	5936227-5936250	24	NZ_CP020701	Streptomyces tsukubensis strain NRRL 18488 plasmid pSTS1, complete sequence	6551-6574	5	0.792
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NC_020276	Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong2, complete sequence	8146-8172	6	0.778
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	489764-489790	6	0.778
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NC_017833	Streptomyces sp. FR1 plasmid pFP4, complete sequence	14075-14101	6	0.778
NZ_CP015098_4	4.2\|2810306\|27\|NZ_CP015098\|CRISPRCasFinder	2810306-2810332	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1799963-1799989	6	0.778
NZ_CP015098_4	4.2\|2810306\|27\|NZ_CP015098\|CRISPRCasFinder	2810306-2810332	27	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	415008-415034	6	0.778
NZ_CP015098_4	4.2\|2810306\|27\|NZ_CP015098\|CRISPRCasFinder	2810306-2810332	27	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	330903-330929	6	0.778
NZ_CP015098_4	4.2\|2810306\|27\|NZ_CP015098\|CRISPRCasFinder	2810306-2810332	27	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1256817-1256843	6	0.778
NZ_CP015098_4	4.2\|2810306\|27\|NZ_CP015098\|CRISPRCasFinder	2810306-2810332	27	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1482362-1482388	6	0.778
NZ_CP015098_11	11.1\|4849375\|29\|NZ_CP015098\|CRISPRCasFinder	4849375-4849403	29	NC_008271	Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence	46282-46310	6	0.793
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	MF472892	Mycobacterium phage TreyKay, complete genome	26331-26359	7	0.759
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	KX641264	Mycobacterium phage LindNT, complete genome	26331-26359	7	0.759
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	MK016503	Mycobacterium phage Prithvi, complete genome	26331-26359	7	0.759
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	314997-315025	7	0.759
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	733554-733582	7	0.759
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1220637-1220663	7	0.741
NZ_CP015098_4	4.1\|2810252\|27\|NZ_CP015098\|CRISPRCasFinder	2810252-2810278	27	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	423780-423806	7	0.741
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	9641-9669	8	0.724
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	MK112540	Mycobacterium phage Froghopper, complete genome	45913-45941	8	0.724
NZ_CP015098_1	1.1\|1702221\|29\|NZ_CP015098\|CRISPRCasFinder	1702221-1702249	29	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	182175-182203	9	0.69
NZ_CP015098_12	12.1\|5695292\|32\|NZ_CP015098\|CRISPRCasFinder	5695292-5695323	32	NZ_CP022365	Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence	6155-6186	10	0.688
NZ_CP015098_12	12.1\|5695292\|32\|NZ_CP015098\|CRISPRCasFinder	5695292-5695323	32	NZ_CP022365	Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence	193376-193407	10	0.688

1. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 2, identity: 0.917

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtgtcgacggcggccttggtcgct	Protospacer
****************.**.****

2. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP047174 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.917

gtgtcgacggcggcctcggccgct	CRISPR spacer
gcgtcgacggcgacctcggccgct	Protospacer
*.**********.***********

3. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP047175 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.917

gtgtcgacggcggcctcggccgct	CRISPR spacer
gcgtcgacggcgacctcggccgct	Protospacer
*.**********.***********

4. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP013255 (Kocuria flava strain HO-9041 plasmid 1, complete sequence) position: , mismatch: 3, identity: 0.889

tcaccgacaccaccggccccgtggagg	CRISPR spacer
tcaccgacaacgccggccccgtggaga	Protospacer
********* *.**************.

5. spacer 4.2|2810306|27|NZ_CP015098|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.889

tcaccggcaccagcggtccgctgcgga	CRISPR spacer
tcaacggcaccagcggtcccctgcggg	Protospacer
*** *************** ******.

6. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
atgtcgacggcggccttggccgcg	Protospacer
.***************.******

7. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtgtcggcggcggccacggccgcg	Protospacer
******.******** *******

8. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_LR134455 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtgtcgacggtggccgcggccgcg	Protospacer
**********.**** *******

9. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP015008 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA03, complete sequence) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
gagacgacggcggcctcggccgcc	Protospacer
* * *******************.

10. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtctcgacggcggcctcggcggcc	Protospacer
** ***************** **.

11. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP011523 (Streptomyces sp. CFMR 7 strain CFMR-7 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtgtcgacggcggcctgggcggcg	Protospacer
**************** *** **

12. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtgtcgacggcgacctcggacgcg	Protospacer
************.****** ***

13. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtggcgacggcggcctcggctgcg	Protospacer
*** ****************.**

14. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to JX100810 (Caulobacter phage CcrColossus, complete genome) position: , mismatch: 3, identity: 0.875

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtttcgacggcgacctcggccgcc	Protospacer
** *********.**********.

15. spacer 4.2|2810306|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP014208 (Pantoea ananatis strain R100 plasmid, complete sequence) position: , mismatch: 4, identity: 0.852

tcaccggcaccagcggtccgctgcgga	CRISPR spacer
tcaccggcaccaacggtcagctgccgc	Protospacer
************.***** ***** *

16. spacer 4.2|2810306|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

tcaccggcaccagcggtccgctgcgga	CRISPR spacer
tgacccgcaccagcggcccgctgcggc	Protospacer
* *** **********.*********

17. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
tcgtcgacggcggccgcggccgcg	Protospacer
 .************* *******

18. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
aagtcgacggcggccgcggccgcg	Protospacer
. ************* *******

19. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
tcgtcgacggcggccttggccgcc	Protospacer
 .**************.******.

20. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
tcgtcgacggcggccttggccgcc	Protospacer
 .**************.******.

21. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
tcgtcgacggcggccttggccgcc	Protospacer
 .**************.******.

22. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
tcgtcgacggcggtctcggccgcc	Protospacer
 .***********.*********.

23. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtgtcggcggcggcctcggccatg	Protospacer
******.**************..

24. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
tcgacgacggcggcctcggccgcc	Protospacer
 .* *******************.

25. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to KY092482 (Streptomyces phage Mojorita, complete genome) position: , mismatch: 4, identity: 0.833

gtgtcgacggcggcctcggccgct	CRISPR spacer
gtgtcgacgccggcctcggcctgc	Protospacer
********* ***********  .

26. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

27. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

28. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

29. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

30. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

31. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

32. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

33. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

34. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

35. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

36. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

37. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

38. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

39. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

40. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccggggca	Protospacer
 ***  ********** **********  *

41. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

42. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

43. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

44. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

45. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

46. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

47. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

48. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

49. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

50. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

51. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

52. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

53. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

54. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

55. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

56. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

57. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

58. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

59. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

60. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

61. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

62. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

63. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

64. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

65. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

66. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

67. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

68. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

69. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

70. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

71. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

72. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

73. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

74. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

75. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

76. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

77. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

78. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

79. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

80. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

81. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

82. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

83. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

84. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

85. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

86. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

87. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

88. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.828

agtg-ggcggtggcggatgtgtccgggtga	CRISPR spacer
-gtgctgcggtggcggctgtgtccgggggc	Protospacer
 ***  ********** ********** *

89. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP014516 (Frondihabitans sp. PAMC 28766 strain SR6 plasmid 3, complete sequence) position: , mismatch: 5, identity: 0.815

tcaccgacaccaccggccccgtggagg	CRISPR spacer
ccaccgacaccacctgccccgtcgtga	Protospacer
.************* ******* * *.

90. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.815

tcaccgacaccaccggccccgtggagg	CRISPR spacer
tcaccgacgccaccggcaccgtgcacc	Protospacer
********.******** ***** *

91. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NZ_AP018921 (Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence) position: , mismatch: 5, identity: 0.815

tcaccgacaccaccggccccgtggagg	CRISPR spacer
gcaccgacaccaccgcccccgaggggc	Protospacer
 ************** ***** **.*

92. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to MN234196 (Gordonia phage CloverMinnie, complete genome) position: , mismatch: 5, identity: 0.815

tcaccgacaccaccggccccgtggagg	CRISPR spacer
ccatcgacaccacccgccccgtggggc	Protospacer
.**.********** *********.*

93. spacer 4.3|2810360|27|NZ_CP015098|CRISPRCasFinder matches to MK937607 (Gordonia phage Zipp, complete genome) position: , mismatch: 5, identity: 0.815

cgaacgtctcctcccgcgacgtccgca	CRISPR spacer
cgatcgtctcctcgcgcgacgtcgccg	Protospacer
*** ********* *********  *.

94. spacer 4.3|2810360|27|NZ_CP015098|CRISPRCasFinder matches to MK937611 (Gordonia phage Verity, complete genome) position: , mismatch: 5, identity: 0.815

cgaacgtctcctcccgcgacgtccgca	CRISPR spacer
cgatcgtctcctcgcgcgacgtcgccg	Protospacer
*** ********* *********  *.

95. spacer 7.1|4287145|25|NZ_CP015098|CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.8

agcacgggtcagtcggcccgggaca	CRISPR spacer
ggcacgggtcagtcggcacggggtc	Protospacer
.**************** ****..

96. spacer 11.1|4849375|29|NZ_CP015098|CRISPRCasFinder matches to NC_015685 (Oligotropha carboxidovorans OM5 plasmid pOC167, complete sequence) position: , mismatch: 5, identity: 0.828

cgggtgtggcgcggtccggatcacaccgg-	CRISPR spacer
cggcggtggcgcggtccggatca-actgct	Protospacer
***  ****************** **.*

97. spacer 13.1|5936227|24|NZ_CP015098|PILER-CR matches to NZ_CP020701 (Streptomyces tsukubensis strain NRRL 18488 plasmid pSTS1, complete sequence) position: , mismatch: 5, identity: 0.792

gtgtcgacggcggcctcggccgct	CRISPR spacer
acgtcgacggcggcctcggcctgc	Protospacer
..*******************  .

98. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NC_020276 (Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong2, complete sequence) position: , mismatch: 6, identity: 0.778

tcaccgacaccaccggccccgtggagg	CRISPR spacer
gcacccacaccaccggccccgttgccc	Protospacer
 **** **************** *

99. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 6, identity: 0.778

tcaccgacaccaccggccccgtggagg	CRISPR spacer
gcaccgacatcaccggccccgtcgtca	Protospacer
 ********.************ *  .

100. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NC_017833 (Streptomyces sp. FR1 plasmid pFP4, complete sequence) position: , mismatch: 6, identity: 0.778

tcaccgacaccaccggccccgtggagg	CRISPR spacer
cggccgacaccaccgaccccgaggagc	Protospacer
. .************.***** ****

101. spacer 4.2|2810306|27|NZ_CP015098|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.778

tcaccggcaccagcggtccgctgcgga	CRISPR spacer
gcaccggcaccggcggtgcgctgcccg	Protospacer
 **********.***** ******  .

102. spacer 4.2|2810306|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 6, identity: 0.778

tcaccggcaccagcggtccgctgcgga	CRISPR spacer
ggcccggcaccatcggtccgctgcgct	Protospacer
   ********* ************

103. spacer 4.2|2810306|27|NZ_CP015098|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.778

tcaccggcaccagcggtccgctgcgga	CRISPR spacer
ccaccggcaccggcggtccgctccccg	Protospacer
.**********.********** *  .

104. spacer 4.2|2810306|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

tcaccggcaccagcggtccgctgcgga	CRISPR spacer
aggccgccaccagcggtcccctgcggc	Protospacer
  .*** ************ ******

105. spacer 4.2|2810306|27|NZ_CP015098|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.778

tcaccggcaccagcggtccgctgcgga	CRISPR spacer
ccaccggcaccggcggtccgctccccg	Protospacer
.**********.********** *  .

106. spacer 11.1|4849375|29|NZ_CP015098|CRISPRCasFinder matches to NC_008271 (Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence) position: , mismatch: 6, identity: 0.793

cgggtgtggcgcggtccggatcacaccgg	CRISPR spacer
acgtcggggcgcggtccggaacacaccgg	Protospacer
  * .* ************* ********

107. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to MF472892 (Mycobacterium phage TreyKay, complete genome) position: , mismatch: 7, identity: 0.759

agtgggcggtggcggatgtgtccgggtga	CRISPR spacer
gcagggcggtggcggctgtgtcctggtcg	Protospacer
.  ************ ******* *** .

108. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to KX641264 (Mycobacterium phage LindNT, complete genome) position: , mismatch: 7, identity: 0.759

agtgggcggtggcggatgtgtccgggtga	CRISPR spacer
gcagggcggtggcggctgtgtcctggtcg	Protospacer
.  ************ ******* *** .

109. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to MK016503 (Mycobacterium phage Prithvi, complete genome) position: , mismatch: 7, identity: 0.759

agtgggcggtggcggatgtgtccgggtga	CRISPR spacer
gcagggcggtggcggctgtgtcctggtcg	Protospacer
.  ************ ******* *** .

110. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 7, identity: 0.759

agtgggcggtggcggatgtgtccgggtga	CRISPR spacer
cgggggcggtggcgggggtgtccgggccg	Protospacer
 * ************. *********. .

111. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 7, identity: 0.759

agtgggcggtggcggatgtgtccgggtga	CRISPR spacer
cgggggcggtggcgggggtgtccgggccg	Protospacer
 * ************. *********. .

112. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 7, identity: 0.741

tcaccgacaccaccggccccgtggagg	CRISPR spacer
tcaccgacaccaccggcccaaagattt	Protospacer
******************* . *.

113. spacer 4.1|2810252|27|NZ_CP015098|CRISPRCasFinder matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 7, identity: 0.741

tcaccgacaccaccggccccgtggagg	CRISPR spacer
tcaccgacaccaccggcccaaagattt	Protospacer
******************* . *.

114. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

agtgggcggtggcggatgtgtccgggtga	CRISPR spacer
gctggccggtggcggatgtgtgcggcgcc	Protospacer
. *** *************** ***

115. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to MK112540 (Mycobacterium phage Froghopper, complete genome) position: , mismatch: 8, identity: 0.724

agtgggcggtggcggatgtgtccgggtga	CRISPR spacer
caactgcggtggcggatgtgttcgggcgg	Protospacer
 .   ****************.****.*.

116. spacer 1.1|1702221|29|NZ_CP015098|CRISPRCasFinder matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 9, identity: 0.69

agtgggcggtggcggatgtgtccgggtga	CRISPR spacer
tcctcacggcggcggatgtgtccgggtcc	Protospacer
  .  .***.*****************

117. spacer 12.1|5695292|32|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022365 (Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence) position: , mismatch: 10, identity: 0.688

gggaccggggggccgcctgcggccatccatgt	CRISPR spacer
tggaccggggggccggcggcggcctgctggag	Protospacer
 ************** * ******  *.. .

118. spacer 12.1|5695292|32|NZ_CP015098|CRISPRCasFinder matches to NZ_CP022365 (Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence) position: , mismatch: 10, identity: 0.688

gggaccggggggccgcctgcggccatccatgt	CRISPR spacer
tggaccggggggccggcggcggcctgctggag	Protospacer
 ************** * ******  *.. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

34293 : 163861

Paenibacillus_phage(60.0%)

transposase,tail,integrase

attL 47510:47528|attR 143193:143211

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062924573.1\|34293_35775_+\|transposase	transposase	NA	NA	NA	NA
WP_062924574.1\|35807_36074_+	hypothetical protein	NA	NA	NA	NA
WP_107308240.1\|36354_37161_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_079128790.1\|37078_37609_-	hypothetical protein	NA	NA	NA	NA
WP_062924577.1\|39326_40088_-	hypothetical protein	NA	NA	NA	NA
WP_062924578.1\|40087_42205_-	hypothetical protein	NA	NA	NA	NA
WP_063827485.1\|42233_42875_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_159029526.1\|42923_43706_-	hypothetical protein	NA	NA	NA	NA
WP_159029527.1\|44716_45151_+	hypothetical protein	NA	NA	NA	NA
WP_062924582.1\|45501_45999_+	hypothetical protein	NA	NA	NA	NA
WP_159029528.1\|46144_46957_+	hypothetical protein	NA	NA	NA	NA
WP_174569499.1\|47310_48090_+\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
47510:47528	attL	NA	NA	NA	NA
WP_062924584.1\|48086_50246_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
47510:47528	attL	NA	NA	NA	NA
WP_062924585.1\|50233_51265_+	ATP-binding protein	NA	NA	NA	NA
WP_079128792.1\|51388_52597_+	TniQ family protein	NA	NA	NA	NA
WP_062924587.1\|52715_53909_+	hypothetical protein	NA	NA	NA	NA
WP_062924588.1\|54059_54833_-	hypothetical protein	NA	NA	NA	NA
WP_062931201.1\|54813_56661_-	hypothetical protein	NA	NA	NA	NA
WP_062924589.1\|57210_57735_-	hypothetical protein	NA	NA	NA	NA
WP_079128793.1\|58598_59033_-	hypothetical protein	NA	NA	NA	NA
WP_062924591.1\|59642_61592_-	DUF3732 domain-containing protein	NA	NA	NA	NA
WP_062924592.1\|61626_62112_-	hypothetical protein	NA	NA	NA	NA
WP_062924593.1\|62108_63323_-	hypothetical protein	NA	NA	NA	NA
WP_174569500.1\|63712_64711_-	5'-nucleotidase	NA	NA	NA	NA
WP_062924595.1\|65465_68741_-	CHAT domain-containing protein	NA	NA	NA	NA
WP_062924596.1\|68914_69274_+	hypothetical protein	NA	NA	NA	NA
WP_062924597.1\|69276_70104_+	hypothetical protein	NA	NA	NA	NA
WP_159029529.1\|70553_70811_-	hypothetical protein	NA	NA	NA	NA
WP_062924599.1\|71157_72246_-	CHAT domain-containing protein	NA	NA	NA	NA
WP_062924600.1\|72690_72888_-	hypothetical protein	NA	NA	NA	NA
WP_062924601.1\|72897_73527_+	hypothetical protein	NA	NA	NA	NA
WP_062924602.1\|73615_76888_-	hypothetical protein	NA	NA	NA	NA
WP_062924603.1\|78169_78559_+	hypothetical protein	NA	NA	NA	NA
WP_062924604.1\|78578_80114_-	caspase family protein	NA	NA	NA	NA
WP_159029530.1\|80103_80505_-	hypothetical protein	NA	NA	NA	NA
WP_174569397.1\|80975_83651_+	Helicase associated domain protein	A0A2H4UTW8	Bodo_saltans_virus	2.6e-13	26.8
81293:81311	attR	NA	NA	NA	NA
WP_159029531.1\|83721_83883_-	hypothetical protein	NA	NA	NA	NA
81293:81311	attR	NA	NA	NA	NA
WP_107308241.1\|83961_85188_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_062924608.1\|86306_86645_+	hypothetical protein	NA	NA	NA	NA
WP_079128794.1\|86661_90981_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_159029532.1\|93970_94126_+	hypothetical protein	NA	NA	NA	NA
WP_062924611.1\|94437_94824_+	hypothetical protein	NA	NA	NA	NA
WP_062924612.1\|96335_96536_-	hypothetical protein	NA	NA	NA	NA
WP_062931203.1\|98204_98651_-	SsgA family sporulation/cell division regulator	NA	NA	NA	NA
WP_107308242.1\|99314_100121_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_062931206.1\|100062_100569_-	hypothetical protein	NA	NA	NA	NA
WP_062924614.1\|100950_101775_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.9e-10	39.5
WP_159029533.1\|101737_102574_-	hypothetical protein	NA	NA	NA	NA
WP_062924616.1\|103281_105096_+	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_062924617.1\|105150_105477_-	WhiB family transcriptional regulator	A0A2P1JRB7	Mycobacterium_phage	2.2e-15	53.6
WP_062924618.1\|105637_106645_-	hypothetical protein	NA	NA	NA	NA
WP_062924619.1\|108422_109106_-	hypothetical protein	NA	NA	NA	NA
WP_159029534.1\|109312_109801_-	hypothetical protein	NA	NA	NA	NA
WP_062924622.1\|110408_110801_+	hypothetical protein	NA	NA	NA	NA
WP_062924623.1\|111548_112262_+	cutinase family protein	NA	NA	NA	NA
WP_062924624.1\|112990_113524_+	CbrC family protein	NA	NA	NA	NA
WP_062924625.1\|114369_114567_+	DUF1918 domain-containing protein	NA	NA	NA	NA
WP_062924574.1\|114601_114868_-	hypothetical protein	NA	NA	NA	NA
WP_062924573.1\|114900_116382_-\|transposase	transposase	NA	NA	NA	NA
WP_062931206.1\|116633_117140_+	hypothetical protein	NA	NA	NA	NA
WP_107308242.1\|117081_117888_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_062924627.1\|118669_119806_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_062924628.1\|119802_120132_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_062924629.1\|121814_123131_-	MFS transporter	NA	NA	NA	NA
WP_167455395.1\|123917_124526_+	hypothetical protein	NA	NA	NA	NA
WP_062924631.1\|130176_131403_-	MFS transporter	NA	NA	NA	NA
WP_062924632.1\|131685_132264_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_062924633.1\|133430_133889_-	hypothetical protein	NA	NA	NA	NA
WP_062924634.1\|133927_134119_-	hypothetical protein	NA	NA	NA	NA
WP_031106884.1\|135077_135248_+	hypothetical protein	NA	NA	NA	NA
WP_062924635.1\|135546_136032_+\|tail	lamin tail domain-containing protein	NA	NA	NA	NA
WP_159029536.1\|136257_136866_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_062924637.1\|136853_138482_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_079128799.1\|138690_139248_-	DUF998 domain-containing protein	NA	NA	NA	NA
WP_062924638.1\|139258_139636_-	hypothetical protein	NA	NA	NA	NA
WP_159029537.1\|139687_139840_-	hypothetical protein	NA	NA	NA	NA
WP_062924639.1\|139984_141088_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_079128800.1\|142771_143641_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-06	33.7
WP_062924614.1\|144135_144960_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.9e-10	39.5
WP_062924641.1\|145009_146023_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_062924644.1\|150052_150556_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_062924645.1\|151237_151813_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_062924646.1\|151909_152854_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_062924647.1\|154085_154586_+	cupin domain-containing protein	NA	NA	NA	NA
WP_079128802.1\|154752_155247_-	hypothetical protein	NA	NA	NA	NA
WP_062924649.1\|155295_155517_-	hypothetical protein	NA	NA	NA	NA
WP_062924650.1\|155545_156571_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_062924651.1\|156753_157536_+	TIM barrel protein	NA	NA	NA	NA
WP_062924652.1\|157587_158613_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_079128803.1\|159598_159883_-	CbrC family protein	NA	NA	NA	NA
WP_062924654.1\|160588_161542_-	hypothetical protein	NA	NA	NA	NA
WP_062924655.1\|161543_161942_-	hypothetical protein	NA	NA	NA	NA
WP_062924656.1\|162025_162646_+	hypothetical protein	NA	NA	NA	NA
WP_062931209.1\|162676_163861_+\|transposase	IS701 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

4580603 : 4590260

Streptomyces_phage(71.43%)

terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062927933.1\|4580603_4581554_-	hypothetical protein	A0A222ZPF6	Mycobacterium_phage	2.9e-15	28.3
WP_062927934.1\|4581567_4582365_-	hypothetical protein	A0A1J0MD42	Streptomyces_phage	3.0e-21	53.1
WP_062927935.1\|4582514_4582799_-	hypothetical protein	NA	NA	NA	NA
WP_079129033.1\|4582811_4585322_-	hypothetical protein	A0A1J0MC53	Streptomyces_phage	7.8e-92	51.6
WP_062927936.1\|4585335_4586853_-\|portal	phage portal protein	A0A1J0MCN7	Streptomyces_phage	1.6e-108	43.6
WP_062927937.1\|4586871_4588149_-\|terminase	PBSX family phage terminase large subunit	A0A1V0E630	Streptomyces_phage	3.1e-121	53.4
WP_062931533.1\|4588135_4588633_-	helix-turn-helix domain-containing protein	A0A1J0MCL8	Streptomyces_phage	4.4e-07	27.0
WP_062927938.1\|4588788_4589133_-	hypothetical protein	NA	NA	NA	NA
WP_062927939.1\|4589232_4589652_-	hypothetical protein	NA	NA	NA	NA
WP_062927940.1\|4589648_4590260_-	DUF433 domain-containing protein	A0A0U4AZ77	Gordonia_phage	2.6e-49	50.5

DBSCAN-SWA_3

4600234 : 4608207

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062927957.1\|4600234_4600789_-	3'-5' exoribonuclease	A0A0M5M6E2	Streptomyces_phage	2.0e-40	50.8
WP_062927958.1\|4600785_4600971_-	hypothetical protein	NA	NA	NA	NA
WP_062927959.1\|4601093_4601609_-	single-stranded DNA-binding protein	R4TIV2	Mycobacterium_phage	5.7e-26	50.4
WP_159029597.1\|4601611_4601767_-	hypothetical protein	NA	NA	NA	NA
WP_079129036.1\|4601975_4602272_-	hypothetical protein	NA	NA	NA	NA
WP_062927960.1\|4602268_4602553_-	hypothetical protein	NA	NA	NA	NA
WP_062927961.1\|4602549_4603245_-	hypothetical protein	NA	NA	NA	NA
WP_062927962.1\|4603241_4604264_-	hypothetical protein	A0A0R8VA02	Thermobifida_phage	1.5e-22	54.6
WP_062927963.1\|4604333_4604783_-	WhiB family transcriptional regulator	A0A0K2FNL9	Mycobacterium_phage	2.9e-10	44.4
WP_062927964.1\|4604851_4605388_-	hypothetical protein	NA	NA	NA	NA
WP_063827505.1\|4605384_4606902_-	ATP-dependent helicase	A0A126DN25	Acinetobacter_phage	3.0e-54	31.1
WP_062927966.1\|4606938_4608207_-	AAA family ATPase	A0A160DER9	Gordonia_phage	4.0e-44	39.7

DBSCAN-SWA_4

6680567 : 6695524

Streptomyces_phage(66.67%)

terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062929480.1\|6680567_6682748_-	hypothetical protein	I6TJQ3	Staphylococcus_virus	8.1e-13	28.1
WP_062929481.1\|6683033_6683441_-	hypothetical protein	NA	NA	NA	NA
WP_062929482.1\|6683463_6684021_-	hypothetical protein	A0A2L1IVP9	Streptomyces_phage	7.1e-06	28.5
WP_159029632.1\|6684022_6684193_-	hypothetical protein	NA	NA	NA	NA
WP_062929483.1\|6684251_6684680_-	hypothetical protein	NA	NA	NA	NA
WP_062929484.1\|6684679_6684949_-	HK97 gp10 family phage protein	H9YRP8	environmental_Halophage	2.6e-06	50.8
WP_062929485.1\|6684958_6685579_-	hypothetical protein	NA	NA	NA	NA
WP_062929486.1\|6685572_6685953_-	hypothetical protein	A0A1J0MC70	Streptomyces_phage	7.0e-13	45.5
WP_062929487.1\|6685963_6686275_-	hypothetical protein	A0A1J0MBX0	Streptomyces_phage	9.8e-05	59.1
WP_062929488.1\|6686277_6686655_-	hypothetical protein	NA	NA	NA	NA
WP_062929489.1\|6686688_6687522_-	hypothetical protein	A0A1L2JY55	Aeribacillus_phage	2.5e-55	43.9
WP_159029633.1\|6687629_6688337_-	hypothetical protein	NA	NA	NA	NA
WP_062929491.1\|6688401_6689937_-\|portal	phage portal protein	A0A1J0MBZ7	Streptomyces_phage	3.8e-81	39.2
WP_062929492.1\|6689963_6691238_-\|terminase	PBSX family phage terminase large subunit	A0A1J0MC69	Streptomyces_phage	3.7e-106	48.6
WP_062929493.1\|6691215_6691737_-	hypothetical protein	A0A1J0MBY5	Streptomyces_phage	1.5e-13	35.3
WP_062929494.1\|6691834_6692476_+	hypothetical protein	NA	NA	NA	NA
WP_079129167.1\|6692435_6692702_-	helix-turn-helix domain-containing protein	E7EJW5	Mycobacterium_phage	1.6e-08	56.1
WP_159029634.1\|6692817_6693339_-	hypothetical protein	NA	NA	NA	NA
WP_159029635.1\|6693382_6693958_-	hypothetical protein	NA	NA	NA	NA
WP_063827520.1\|6694031_6694862_-	hypothetical protein	Q1WDH0	Streptomyces_phage	2.7e-25	54.2
WP_062929498.1\|6694867_6695524_-	hypothetical protein	A0A142K676	Streptomyces_phage	4.4e-23	38.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015098

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection