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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012400 Pseudomonas yamanorum strain LBUM636 chromosome, complete genome 0 crisprs DEDDh,cas3,csa3,WYL,DinG,PD-DExK 0 0 11 0

Results visualization

1. NZ_CP012400
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 174386 : 186151 9 Bacillus_phage(33.33%) bacteriocin NA
DBSCAN-SWA_2 247176 : 296687 44 Klosneuvirus(20.0%) holin,protease NA
DBSCAN-SWA_3 1032968 : 1104221 76 Pseudomonas_phage(50.0%) tRNA,lysis,plate,holin,transposase,tail NA
DBSCAN-SWA_4 2029234 : 2066632 31 Bacillus_virus(20.0%) coat,protease NA
DBSCAN-SWA_5 2492228 : 2558468 60 Planktothrix_phage(66.67%) transposase,plate NA
DBSCAN-SWA_6 3420514 : 3489703 86 Pseudomonas_phage(65.12%) lysis,capsid,transposase,bacteriocin,tail,terminase NA
DBSCAN-SWA_7 3493133 : 3509261 23 uncultured_Caudovirales_phage(40.0%) integrase attL 3504769:3504782|attR 3507029:3507042
DBSCAN-SWA_8 4010580 : 4022563 15 uncultured_Caudovirales_phage(60.0%) tRNA NA
DBSCAN-SWA_9 4507009 : 4566737 60 Hokovirus(25.0%) transposase,holin,protease,terminase NA
DBSCAN-SWA_10 5169973 : 5175044 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_11 6201576 : 6302729 112 Pseudomonas_phage(51.22%) tRNA,protease,lysis,portal,plate,capsid,terminase,tail,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage