CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP015077	Escherichia coli strain Ecol_448 plasmid pEC448_1, complete sequence	0 crisprs	NA	0	1
NZ_CP015078	Escherichia coli strain Ecol_448 plasmid pEC448_OXA163, complete sequence	0 crisprs	NA	0	0
NZ_CP015076	Escherichia coli strain Ecol_448 chromosome, complete genome	2 crisprs	cas3,RT,DEDDh,DinG,c2c9_V-U4,csa3	1	7

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

25320 : 80718

Escherichia_phage(30.0%)

transposase,integrase

attL 59107:59166|attR 77213:77363

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000016982.1\|25320_26127_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.8e-57	100.0
WP_001159868.1\|26127_26433_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_000813634.1\|26434_26653_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_000151784.1\|27219_27732_+	hypothetical protein	NA	NA	NA	NA
WP_000545987.1\|27765_28899_-	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_000905949.1\|29065_29839_-	hypothetical protein	NA	NA	NA	NA
WP_000528931.1\|29851_30352_-	hypothetical protein	NA	NA	NA	NA
WP_001261278.1\|30616_30847_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001034046.1\|30843_31260_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_061092170.1\|35090_35348_-	hypothetical protein	NA	NA	NA	NA
WP_000421272.1\|35453_35729_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_001387467.1\|35728_36013_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_000562172.1\|36617_37370_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_001022265.1\|37415_38381_-	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA
WP_000710783.1\|38413_38794_-	reactive intermediate/imine deaminase	NA	NA	NA	NA
WP_001077068.1\|38818_39709_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_000796505.1\|39941_40136_-	hypothetical protein	NA	NA	NA	NA
WP_000338039.1\|40680_41559_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_001271561.1\|41548_42436_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_000922702.1\|42446_43271_+	phosphodiesterase	NA	NA	NA	NA
WP_000950177.1\|43276_44350_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.6e-28	33.7
WP_000476108.1\|44342_45653_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001067834.1\|47572_48277_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_000874189.1\|48986_49472_-	hypothetical protein	NA	NA	NA	NA
WP_001267177.1\|49496_49982_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_000117262.1\|49968_50664_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-29	38.9
WP_000729220.1\|50668_51799_-	ABC transporter permease	NA	NA	NA	NA
WP_000964653.1\|51788_53072_-	ABC transporter permease	NA	NA	NA	NA
WP_000119836.1\|53074_54454_-	DUF2318 domain-containing protein	NA	NA	NA	NA
WP_000178050.1\|54557_55085_-	iron transporter	NA	NA	NA	NA
WP_000118029.1\|55125_57012_-	FTR1 family iron permease	NA	NA	NA	NA
WP_012372823.1\|57358_58174_-	Na(+)-translocating NADH-quinone reductase subunit C	NA	NA	NA	NA
WP_000949452.1\|58356_58863_-	protein disulfide oxidoreductase	NA	NA	NA	NA
WP_000449408.1\|58852_59011_-	copper-sensitivity suppressor C	NA	NA	NA	NA
59107:59166	attL	NA	NA	NA	NA
WP_001072355.1\|60452_61622_-	hypothetical protein	NA	NA	NA	NA
WP_023141670.1\|62821_62947_+	hypothetical protein	NA	NA	NA	NA
WP_001066953.1\|63067_63808_+\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	2.0e-24	57.6
WP_000361611.1\|64092_65070_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	4.6e-101	63.9
WP_000949004.1\|68051_68966_+	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_000983710.1\|68965_69793_+	iron/manganese ABC transporter ATP-binding protein SitB	A0A1M7XV31	Cedratvirus	3.6e-14	27.0
WP_001101723.1\|69789_70647_+	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_000968139.1\|70643_71501_+	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_000361402.1\|72850_73873_-	helicase UvrD	NA	NA	NA	NA
WP_001128474.1\|73857_75423_-	AAA family ATPase	NA	NA	NA	NA
WP_001034044.1\|75497_75914_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001261286.1\|75910_76141_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|77266_77971_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
77213:77363	attR	NA	NA	NA	NA
WP_000027057.1\|78555_79416_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001387387.1\|79565_79967_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001067855.1\|80013_80718_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP015076

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015076_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015076_1

287486-287627

Orphan

Consensus_repeat	Method
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015076_1

>merge|NZ_CP015076|1|287486-287627|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAGAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGCGCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

>NZ_CP015076|1|1|287486-287627|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	AAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGC
GCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015076.1\|WP_001048602.1\|291927_293094_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP015076.1\|WP_000099866.1\|290616_291834_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP015076.1\|WP_001235263.1\|286722_287439_+\|succinate-dehydrogenase-iron-sulfur-subunit-SdhB	unknown	unknown	gnl\|CDD\|235652
NZ_CP015076.1\|WP_001237779.1\|280400_280862_+\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632
NZ_CP015076.1\|WP_001305582.1\|283707_283815_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015076.1\|WP_000025458.1\|293093_293963_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_CP015076.1\|WP_000725054.1\|299722_300916_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP015076.1\|WP_000884361.1\|302458_304027_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
NZ_CP015076.1\|WP_000735581.1\|279372_280341_+\|C4-dicarboxylate-ABC-transporter	unknown	unknown	gnl\|CDD\|270387
NZ_CP015076.1\|WP_000568275.1\|304042_305182_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NZ_CP015076.1\|WP_000399432.1\|278148_279345_+\|UxaA-family-hydrolase	unknown	unknown	gnl\|CDD\|377287
NZ_CP015076.1\|WP_000775540.1\|284940_286707_+\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181594
NZ_CP015076.1\|WP_000254365.1\|284593_284941_+\|succinate-dehydrogenase-membrane-anchor-subunit	unknown	unknown	gnl\|CDD\|181901
NZ_CP015076.1\|WP_000785832.1\|282218_283502_-\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_CP015076.1\|WP_000648958.1\|296891_299525_+\|mannosylglycerate-hydrolase	unknown	unknown	gnl\|CDD\|182093
NZ_CP015076.1\|WP_000509910.1\|294066_294789_-\|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR	unknown	unknown	gnl\|CDD\|182065
NZ_CP015076.1\|WP_000126143.1\|280861_282172_+\|TRAP-transporter-large-permease	unknown	unknown	gnl\|CDD\|224509
NZ_CP015076.1\|WP_001531490.1\|294957_296874_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	unknown	unknown	gnl\|CDD\|182066
NZ_CP015076.1\|WP_000263355.1\|284195_284600_+\|succinate-dehydrogenase-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|181900
NZ_CP015076.1\|WP_001181475.1\|287800_290602_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499

Protein	Function_ID	Function_description	E-value
NZ_CP015076.1\|WP_001048602.1\|291927_293094_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP015076.1\|WP_000254365.1\|284593_284941_+\|succinate-dehydrogenase-membrane-anchor-subunit	gnl\|CDD\|181901	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit.	5.54037e-58
NZ_CP015076.1\|WP_001235263.1\|286722_287439_+\|succinate-dehydrogenase-iron-sulfur-subunit-SdhB	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	3.48257e-167
NZ_CP015076.1\|WP_001237779.1\|280400_280862_+\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	2.66483e-21
NZ_CP015076.1\|WP_000735581.1\|279372_280341_+\|C4-dicarboxylate-ABC-transporter	gnl\|CDD\|270387	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold. This subgroup includes the hyperthermophilic bacterium Thermotoga maritima TRAP-type C4-dicarboxylate transport system TM0322 and its closely related proteins. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.46494e-145
NZ_CP015076.1\|WP_000025458.1\|293093_293963_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP015076.1\|WP_000725054.1\|299722_300916_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.01578e-17
NZ_CP015076.1\|WP_000884361.1\|302458_304027_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
NZ_CP015076.1\|WP_000509910.1\|294066_294789_-\|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR	gnl\|CDD\|182065	PRK09764, PRK09764, GntR family transcriptional regulator.	1.54929e-163
NZ_CP015076.1\|WP_000568275.1\|304042_305182_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	0
NZ_CP015076.1\|WP_000399432.1\|278148_279345_+\|UxaA-family-hydrolase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	5.6924e-134
NZ_CP015076.1\|WP_000775540.1\|284940_286707_+\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|181594	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP015076.1\|WP_000099866.1\|290616_291834_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP015076.1\|WP_000785832.1\|282218_283502_-\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP015076.1\|WP_000648958.1\|296891_299525_+\|mannosylglycerate-hydrolase	gnl\|CDD\|182093	PRK09819, PRK09819, mannosylglycerate hydrolase.	0
NZ_CP015076.1\|WP_000126143.1\|280861_282172_+\|TRAP-transporter-large-permease	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	2.11617e-118
NZ_CP015076.1\|WP_001531490.1\|294957_296874_+\|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	0
NZ_CP015076.1\|WP_000263355.1\|284195_284600_+\|succinate-dehydrogenase-cytochrome-b556-subunit	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	3.50714e-82
NZ_CP015076.1\|WP_001181475.1\|287800_290602_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0

>NZ_CP015076.1|WP_001235263.1|286722_287439_+|succinate-dehydrogenase-iron-sulfur-subunit-SdhB
MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
>NZ_CP015076.1|WP_000775540.1|284940_286707_+|succinate-dehydrogenase-flavoprotein-subunit
MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
>NZ_CP015076.1|WP_000254365.1|284593_284941_+|succinate-dehydrogenase-membrane-anchor-subunit
MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV
>NZ_CP015076.1|WP_000263355.1|284195_284600_+|succinate-dehydrogenase-cytochrome-b556-subunit
MWALFMIRNVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
>NZ_CP015076.1|WP_001305582.1|283707_283815_-|hypothetical-protein
MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV
>NZ_CP015076.1|WP_000785832.1|282218_283502_-|citrate-(Si)-synthase
MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYAQRDFKSDIKK
>NZ_CP015076.1|WP_000126143.1|280861_282172_+|TRAP-transporter-large-permease
MTALSELLAGSWLDNWLMIIPLMFVCLFINMPVWLAMFCGILTYFLCYSNVPLMVAIQRLIATTQTPSLLAIPFFILLGTLMSYTGIAARILQIANVLIGRMRGGLGGANILVSTMMGGVSASNLADAAMLSRMMVPEMEQKGYSRGFAAAITASGSLITPIIPPGIALILYGLVADVSIGSMFMAGILPGLLCSAMLIVTVWLVAIRRGLKPSSEHWPKPKEVSVALVQAWPALFLIVAVIGGIRANIFTPTEAGAVAVLLVMFIGFVIYRELKISHVFTALSETARSTASVMLIIMASAALGWIFSLERAGITVAEFVTSLTDNKYVFLLIINLLLLVLGMFLEGSAILLILVPLLKPVVAHFGIDPVHFGIIMILNLSLGTLSPPVGTVMLLVCNTVQVSVGQFMREAVPLLISLILLLLVITYIPAISLLLV
>NZ_CP015076.1|WP_001237779.1|280400_280862_+|TRAP-transporter-small-permease
MRLLGKMIEVAAVLTLFILVIMTIAAVIMRYCFHMPLQWTEEVSGLLMIWVVMFGAVVAERDNTHLSIPFLADALTSRGQRILAFLVSLMSIILLVVMAWSAWKLAAGTAFKTTQILKISWFWIDIAVTVGAIGVACFTALQLIKKTPRKEGE
>NZ_CP015076.1|WP_000735581.1|279372_280341_+|C4-dicarboxylate-ABC-transporter
MKKLLTPLLFLLALFSPMLNAAPVTIKIAYESNPGEPADTVVKHWAELVKKKSNGDIVFELYPSSQLGSKQDITEQALMGMNIITISDVGFLTDYDADLGILFGPYLTEDPQKLFAIYASDWFKQKEQKLREKGVHIVMSNYLYGTRQIIAKKPIRTPEDLKGMKIRVPNNVMQIKAIEAMGATPTPMPLGDVYPALTQGMIDGVENPVSVLYGQKLHEQAKYLSMVNYLTNTSLWLGGEAFFSTLTPAQLDIIHQTAYEAGLYSQKITTEQDATMLKTMQEQGVEIIYPDVAPFKEKALKVYQQFPEWTPGLYDTIQQQLK
>NZ_CP015076.1|WP_000399432.1|278148_279345_+|UxaA-family-hydrolase
MEGYVRQNGRPGIRNTVQVIFMVECASHVAKKIAEGFPCHDVQYFGFSGCYPSDYGYRLVKNLATHSNVGGVLIISLGCENFDRRRLEQEVRESGRPCHTLVIQENKGTTNTITLGKQLVAEMLEQLADTPRCILNWSDLVVGTICGGSDGTSGITGNPAVGRAFDQLLEKGATCIFEESGELLGCEQHMMSRAASSQARDAIEVAMTKAERYYSLMGLGSFSNGNAEGGLTTQEEKSLGAYTKSGDALIAGVILPTQQTPFPGLWLMDVVPDGEPRFGYPNINDSSEALELIASGCHMVLFTTGRGSVIGSVIAPIIKVCNNPQTWEHLSDDMDVNAGRVISEGATLDDIADDIMQVIEHVANGQYCAAERLEHQEFVLTYKAFDYSKSAVCRADPR
>NZ_CP015076.1|WP_001181475.1|287800_290602_+|2-oxoglutarate-dehydrogenase-E1-component
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAISEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
>NZ_CP015076.1|WP_000099866.1|290616_291834_+|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MSSVDILVPDLPESVADATVATWHKKPGDVVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV
>NZ_CP015076.1|WP_001048602.1|291927_293094_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
>NZ_CP015076.1|WP_000025458.1|293093_293963_+|succinate--CoA-ligase-subunit-alpha
MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK
>NZ_CP015076.1|WP_000509910.1|294066_294789_-|mannosyl-D-glycerate-transport/metabolism-system-transcriptional-repressor-MngR
MGHKPLYRQIADRIREQITCGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVETHSEVLIFEVIPADNFLQQQLQISEQDRVWHVKRVRYRKQKPVALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGQVFEYSRNAFNTDDYKFTLIAQRKSPR
>NZ_CP015076.1|WP_001531490.1|294957_296874_+|PTS-2-O-a-mannosyl-D-glycerate-transporter-subunit-IIABC
MNLTTLTHRDALCLNVRFTSREEAIHALTQRLAALGKISSTEQFLEEVYCRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMKLLTALTTRLADDELRARIQSATTPDELLSALDDKGDAQHTASFSYAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNIYVEKQGANGIEERLTAEQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGMLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGNNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRHHAVKHGNYLTDGVMP
>NZ_CP015076.1|WP_000648958.1|296891_299525_+|mannosylglycerate-hydrolase
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRVKKLVEGGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREIYPQRKFVMSRFEEVFEQIEAQRESLAILKGEFIDGKYMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFDYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRGSQFNLRDGRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQISQIVPSMGYRTLYIEANQPGNVVTPKSKTEGILENAFWQIALNEDGSLRLVDKDSGVRYDRVFQIEEGSDDGDEYDYSPAKEEWAITSANAKPQYDIIHEAWQSRAIIRYEIAVPRNLSERRAKQCSGRVGVETVITLSHNSRRIDADINLDNQADDHRIRVLIPTPFNTDVVLADTQFGSLTRPVKDCAMNVWQQEGWKEAPVPVWNMLNYAVLQEGRNGIAVFSEGLREFEVIGEENKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVSDSQLRGSFSCRLSLFSYIGTPVTAGVAQQARAWLTPVQCYNKIPWDAMKLNKAKFNVPESYSLLKMPPVGCLISALKKAEDRQELILRLFNPAELTSCDATVAFSRKVMTCTETMMNERFNTEKNEVLKELALFLPGQSRTFSYRIV
>NZ_CP015076.1|WP_000725054.1|299722_300916_+|tetratricopeptide-repeat-protein
MKKIVLPVALALLGMNAGAYAADVSIDILSATVKDKRIEGASVTLQRNGAQSVSGITNTSGSISLGTSFADNKDALLIVKKEGYSNLVVKCPCAGMTYAISPVMTNLDGMRVVLSWGEKPFDLDSHLIFPGGHIYFDSKEGTDANLDVDDTDSYGPETVTISKKHFGESYIYAVQDYSNKGLPNSNYLSASKAKVFVYVGSSLVRSYSVPAGKRGNIWTVFKLNPNGEFEDINSVTSANFNGTTLDVRDLATVIMPATDSSAPASPAMQNSGDTQLARKYNREGEAVYKTGQLEQAIQLFQQATELDGNYGQAFSNLGLAYQKNGNIAEAIWANRKAISLASGVNAATTRANSYYNIAKIYETSGQNAEALQHYQLAYTEKNKPSYEEAIARVKTKM
>NZ_CP015076.1|WP_000884361.1|302458_304027_+|cytochrome-ubiquinol-oxidase-subunit-I
MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR
>NZ_CP015076.1|WP_000568275.1|304042_305182_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY

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Crispr_ID: NZ_CP015076_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015076_2

453694-453776

Orphan

I-F

Consensus_repeat	Method
AGTTCACTGCCGTACAGGCAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015076_2

>merge|NZ_CP015076|2|453694-453776|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCTTAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACAAGTTCACTGCCGTACAGGCAGAT

>NZ_CP015076|2|2|453694-453776|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCT	TAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACA
AGTTCACTGCCGTACAGGCAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015076.1\|WP_001202204.1\|455415_457137_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP015076.1\|WP_001043561.1\|457137_458904_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP015076.1\|WP_000188152.1\|448288_450235_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP015076.1\|WP_000934041.1\|451205_453482_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP015076.1\|WP_001351020.1\|446069_447026_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP015076.1\|WP_000886683.1\|467485_468778_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP015076.1\|WP_000520775.1\|450854_451175_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP015076.1\|WP_001385255.1\|459026_459992_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP015076.1\|WP_000067797.1\|466051_467395_+\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP015076.1\|WP_001040187.1\|454166_454385_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP015076.1\|WP_001241674.1\|454669_455374_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP015076.1\|WP_000746478.1\|447176_448292_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP015076.1\|WP_000458841.1\|440184_441837_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP015076.1\|WP_000410785.1\|450307_450532_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP015076.1\|WP_000488716.1\|443294_443990_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP015076.1\|WP_001295343.1\|465429_466041_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP015076.1\|WP_000599803.1\|444414_446073_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP015076.1\|WP_000491137.1\|441980_442880_-\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287
NZ_CP015076.1\|WP_000228473.1\|460535_461030_+\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP015076.1\|WP_000077084.1\|461164_465271_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669

Protein	Function_ID	Function_description	E-value
NZ_CP015076.1\|WP_001202204.1\|455415_457137_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP015076.1\|WP_001043561.1\|457137_458904_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP015076.1\|WP_000188152.1\|448288_450235_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP015076.1\|WP_000934041.1\|451205_453482_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP015076.1\|WP_001351020.1\|446069_447026_-\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	3.43529e-131
NZ_CP015076.1\|WP_000886683.1\|467485_468778_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP015076.1\|WP_000520775.1\|450854_451175_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	3.7104e-49
NZ_CP015076.1\|WP_001385255.1\|459026_459992_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP015076.1\|WP_000067797.1\|466051_467395_+\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP015076.1\|WP_001040187.1\|454166_454385_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP015076.1\|WP_001241674.1\|454669_455374_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.92039e-139
NZ_CP015076.1\|WP_000746478.1\|447176_448292_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP015076.1\|WP_000458841.1\|440184_441837_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP015076.1\|WP_000410785.1\|450307_450532_-\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP015076.1\|WP_000488716.1\|443294_443990_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	7.82992e-144
NZ_CP015076.1\|WP_001295343.1\|465429_466041_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
NZ_CP015076.1\|WP_000599803.1\|444414_446073_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP015076.1\|WP_000491137.1\|441980_442880_-\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	3.40497e-117
NZ_CP015076.1\|WP_000228473.1\|460535_461030_+\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP015076.1\|WP_000077084.1\|461164_465271_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0

>NZ_CP015076.1|WP_000934041.1|451205_453482_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP015076.1|WP_000520775.1|450854_451175_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMDFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP015076.1|WP_000410785.1|450307_450532_-|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP015076.1|WP_000188152.1|448288_450235_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLEWKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNATGGTEPVVNTASGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP015076.1|WP_000746478.1|447176_448292_+|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIAMVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKINDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP015076.1|WP_001351020.1|446069_447026_-|DUF535-domain-containing-protein
MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAELTFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFCS
>NZ_CP015076.1|WP_000599803.1|444414_446073_+|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENIPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP015076.1|WP_000488716.1|443294_443990_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN
>NZ_CP015076.1|WP_000491137.1|441980_442880_-|L-lysine-exporter-LysO
MFSGLLIILVPLIVGYLIPLRQKAALRVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSTTVILLCNIAALMWLERGLPWSNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP015076.1|WP_000458841.1|440184_441837_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIATLQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIIGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
>NZ_CP015076.1|WP_001040187.1|454166_454385_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP015076.1|WP_001241674.1|454669_455374_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLSNNFWVPRCLFSPQE
>NZ_CP015076.1|WP_001202204.1|455415_457137_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPKVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIYLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP015076.1|WP_001043561.1|457137_458904_-|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLFLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP015076.1|WP_001385255.1|459026_459992_-|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNTDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP015076.1|WP_000228473.1|460535_461030_+|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP015076.1|WP_000077084.1|461164_465271_+|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTVRGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQSTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYATAAEQPAQQPYYAPAPEQAVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAQQPQYQQPQQPVTQQPQYQQPQQPVVPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP015076.1|WP_001295343.1|465429_466041_+|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP015076.1|WP_000067797.1|466051_467395_+|replication-associated-recombination-protein-RarA
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAVGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP015076.1|WP_000886683.1|467485_468778_+|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12111-12158	8	0.833
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	424237-424284	8	0.833
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7391-7438	10	0.792
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84215-84262	10	0.792
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87125-87172	10	0.792
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229237-229284	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229338-229385	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229439-229486	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239731-239778	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239832-239879	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239933-239980	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15006-15053	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230643-230690	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230744-230791	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230845-230892	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211613-211660	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211714-211761	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211815-211862	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31250-31297	11	0.771
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3371-3418	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4012-4059	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4113-4160	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208980-209027	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3370-3417	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4011-4058	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4112-4159	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219474-219521	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3370-3417	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4011-4058	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4112-4159	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210308-210355	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3370-3417	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4011-4058	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4112-4159	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191263-191310	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	270-317	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101195-101242	12	0.75
NZ_CP015076_1	1.1\|287533\|48\|NZ_CP015076\|CRISPRCasFinder	287533-287580	48	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	158-205	13	0.729

1. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaac	Protospacer
.* .********************* ****************   *.*

2. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcg-catcaggcaaacagc	CRISPR spacer
aacctgtaggcctgataagacgcgcaagcgtcgccatcaggcatctca-	Protospacer
** *.**************************** *********  . .

3. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

4. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

5. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
attttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtgc	Protospacer
*  ..*******************  ****************    **

6. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

7. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

8. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

9. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

10. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

11. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

12. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctggt	Protospacer
.. .******* ************* ****************  ..*.

13. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

14. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

15. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

16. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

17. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

18. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

19. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
cggctgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
 ..*.*******************  ****************   * .

20. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

21. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

22. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

23. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

24. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

25. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

26. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

27. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

28. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

29. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

30. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

31. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

32. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

33. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

34. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

35. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

36. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
.. ..*******************  ****************   * .

37. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
taatacaaggcctgataagacgcgccagcgtcgcatcaggcgctgaat	Protospacer
 **.   ****************** ***************.   *..

38. spacer 1.1|287533|48|NZ_CP015076|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 13, identity: 0.729

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt	Protospacer
.  . *******************. ***************    * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

32796 : 108807

Enterobacteria_phage(33.93%)

head,tRNA,portal,protease,integrase,tail,terminase,capsid,lysis

attL 32892:32907|attR 119864:119879

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157954.1\|32796_33903_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
32892:32907	attL	NA	NA	NA	NA
WP_000460119.1\|33971_34898_-	HTH-type transcriptional activator AllS	NA	NA	NA	NA
WP_000776372.1\|35127_35610_+	ureidoglycolate lyase	NA	NA	NA	NA
WP_000141269.1\|35687_36503_+	HTH-type transcriptional repressor AllR	NA	NA	NA	NA
WP_001295838.1\|36592_38374_+	glyoxylate carboligase	E4WLQ6	Ostreococcus_tauri_virus	7.8e-38	27.2
WP_000943566.1\|38386_39163_+	hydroxypyruvate isomerase	NA	NA	NA	NA
WP_000401115.1\|40310_41765_+	putative allantoin permease	NA	NA	NA	NA
WP_000006873.1\|41824_43186_+	allantoinase AllB	NA	NA	NA	NA
WP_001295839.1\|43241_44543_+	uracil/xanthine transporter	NA	NA	NA	NA
WP_001295840.1\|44564_45710_+	glycerate 3-kinase	W6LM47	Streptococcus_phage	9.7e-50	43.0
WP_000540974.1\|45837_46623_-	(S)-ureidoglycine aminohydrolase	NA	NA	NA	NA
WP_001385234.1\|46633_47869_-	allantoate deiminase	NA	NA	NA	NA
WP_000703882.1\|47890_48940_-	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_000580888.1\|49256_50924_+	acyl-CoA synthetase FdrA	NA	NA	NA	NA
WP_000495391.1\|50933_52193_+	DUF1116 domain-containing protein	NA	NA	NA	NA
WP_001313637.1\|52203_53019_+	DUF2877 domain-containing protein	NA	NA	NA	NA
WP_000855407.1\|53015_53909_+	carbamate kinase	NA	NA	NA	NA
WP_000815584.1\|54442_55510_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001295318.1\|55506_56016_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_001188439.1\|56111_56441_-	hypothetical protein	NA	NA	NA	NA
WP_000212245.1\|56551_57274_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_000255987.1\|57276_57771_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_000912352.1\|57944_59330_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8
WP_001143517.1\|59365_59887_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190282.1\|59994_60207_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729155.1\|60208_61075_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_000025786.1\|61115_61313_+	hypothetical protein	NA	NA	NA	NA
WP_001298992.1\|61437_62601_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.0e-200	86.6
WP_000433946.1\|62456_62828_-	helix-turn-helix domain-containing protein	S5FM74	Shigella_phage	2.5e-47	82.8
WP_000206810.1\|62827_63133_-	hypothetical protein	U5P0J0	Shigella_phage	2.2e-49	97.0
WP_001595423.1\|63132_63495_-	hypothetical protein	K7PH61	Enterobacteria_phage	1.7e-64	97.4
WP_000008165.1\|63485_64022_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	4.8e-100	98.3
WP_000081287.1\|64149_64974_-	DUF2303 family protein	U5P439	Shigella_phage	6.0e-150	100.0
WP_000135682.1\|65039_65402_-	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_000559922.1\|65872_66388_+	hypothetical protein	NA	NA	NA	NA
WP_000848748.1\|66602_67277_-	LexA family transcriptional repressor	U5P0T5	Shigella_phage	1.2e-132	100.0
WP_000649477.1\|67367_67568_+	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
WP_000515829.1\|67611_68169_+	protein YmfL	S5FXP0	Shigella_phage	1.1e-96	96.2
WP_001250269.1\|68344_68524_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000104986.1\|68513_69455_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.9e-152	99.0
WP_077764601.1\|69451_69946_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	5.2e-85	96.9
WP_000210176.1\|69945_70272_+	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	2.3e-52	97.2
WP_001547119.1\|70268_70658_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	2.3e-67	98.4
WP_001061408.1\|70677_71475_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	7.5e-150	99.6
WP_001547120.1\|71482_72472_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.4e-191	97.3
WP_001204776.1\|72489_72873_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	1.5e-55	83.3
WP_000737271.1\|73061_74144_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.6e-166	80.1
WP_000839597.1\|74733_74949_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	2.6e-33	100.0
WP_001135253.1\|74948_75446_+	lysozyme RrrD	M1FJA0	Enterobacteria_phage	6.0e-89	97.0
WP_000088942.1\|75442_75880_+\|lysis	lysis protein	A0A220NRM0	Escherichia_phage	3.2e-70	97.2
WP_000839225.1\|76081_76579_+	DNA-binding protein	A0A220NRM9	Escherichia_phage	1.1e-93	100.0
WP_001283921.1\|76575_76833_+	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
WP_000079508.1\|77119_77530_-	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
WP_001331705.1\|77587_77821_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	9.5e-21	96.3
WP_000453587.1\|78209_78755_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_001027298.1\|78729_80655_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.7
WP_000198149.1\|80651_80858_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001595430.1\|80854_82456_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.6e-308	98.5
WP_001595431.1\|82436_83768_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	1.5e-230	97.9
WP_000201478.1\|83777_84110_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.7e-51	90.9
WP_000118192.1\|84165_85191_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.4e-185	95.6
WP_001586767.1\|85232_85628_+	hypothetical protein	A0A2R9YJP4	Escherichia_phage	1.2e-55	91.7
WP_000752965.1\|85639_85993_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	2.2e-61	98.3
WP_001595432.1\|86004_86583_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-79	99.0
WP_000683142.1\|86579_86975_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	2.9e-70	99.2
WP_001424234.1\|86982_87723_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.2e-125	95.1
WP_001595434.1\|87738_88161_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	9.1e-62	85.0
WP_000459464.1\|88142_88577_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.7e-63	98.3
WP_063131892.1\|88569_91131_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.5
WP_000847352.1\|91127_91457_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	1.1e-57	97.2
WP_001152612.1\|91456_92155_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.1e-132	98.7
WP_063131893.1\|92160_92904_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	3.7e-143	93.5
WP_000090949.1\|92840_93443_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.6e-86	84.7
WP_063131894.1\|93503_96983_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.8
WP_001228249.1\|97050_97650_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	1.5e-102	92.0
WP_063131895.1\|97714_100114_+\|tail	phage tail protein	A0A0E3M194	Enterobacteria_phage	3.9e-133	55.2
WP_000654158.1\|100110_100392_+	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.6e-17	48.9
WP_001595444.1\|100401_101106_+\|tail	tail fiber domain-containing protein	A0A1X7QGH6	Escherichia_phage	7.0e-59	61.7
WP_000355609.1\|101116_101410_+	hypothetical protein	NA	NA	NA	NA
WP_000239881.1\|101603_102272_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001226375.1\|102810_104295_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001201825.1\|104481_105435_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
WP_137444657.1\|105909_106644_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.7e-79	78.4
WP_000259982.1\|106593_106899_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.7e-44	64.3
WP_000239877.1\|106953_107622_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001201855.1\|107853_108807_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
119864:119879	attR	NA	NA	NA	NA

DBSCAN-SWA_2

634542 : 672792

Burkholderia_virus(43.24%)

transposase,integrase,tail,plate,capsid

attL 631328:631349|attR 672049:672070

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
631328:631349	attL	NA	NA	NA	NA
WP_000904922.1\|634542_635115_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.6e-85	85.2
WP_063131899.1\|635186_635660_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.4e-34	51.8
WP_000072166.1\|635666_636281_-\|tail	tail assembly protein	Q9MCR5	Enterobacteria_phage	1.7e-61	61.5
WP_021537399.1\|636280_636763_-\|tail	tail fiber protein	K7P7Q7	Enterobacteria_phage	3.4e-28	45.3
WP_077881674.1\|636801_638397_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	1.0e-41	43.6
WP_063131900.1\|638399_638978_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	4.9e-66	66.8
WP_001219102.1\|638970_640074_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	8.3e-107	55.2
WP_000859111.1\|640064_640412_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	5.9e-35	62.4
WP_000148267.1\|640466_641063_-\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	1.4e-36	45.7
WP_000808006.1\|641059_642214_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	3.2e-85	47.6
WP_012602373.1\|642201_642417_-	membrane protein	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
WP_000458387.1\|642413_643298_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_001202894.1\|646584_646743_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000084213.1\|646666_647002_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001513983.1\|647099_647381_-	hypothetical protein	NA	NA	NA	NA
WP_000034294.1\|647383_647905_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.8e-67	67.6
WP_000729834.1\|647904_649332_-\|tail	tail protein	A4JWK5	Burkholderia_virus	4.5e-214	76.3
WP_012602372.1\|649321_649576_-	hypothetical protein	NA	NA	NA	NA
WP_001101804.1\|649572_650037_-	hypothetical protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
WP_000271668.1\|650036_650483_-	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_000537457.1\|650484_650823_-	DUF2190 family protein	NA	NA	NA	NA
WP_001286908.1\|650832_651786_-	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.8
WP_001273074.1\|651800_652916_-	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
WP_000135514.1\|653130_653589_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.6e-30	44.8
WP_000117556.1\|653591_654413_-\|capsid	minor capsid protein	A4JWJ6	Burkholderia_virus	3.1e-98	61.5
WP_063131901.1\|654393_655890_-	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	1.8e-168	59.6
WP_063131926.1\|655889_657422_-	hypothetical protein	A4JWJ4	Burkholderia_virus	3.6e-185	63.0
WP_000124060.1\|657481_658027_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	9.3e-59	67.6
WP_000227700.1\|658026_658338_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	9.4e-32	62.6
WP_000175097.1\|658337_658664_-	membrane protein	Q6QIC4	Burkholderia_phage	9.6e-19	49.5
WP_063131902.1\|658660_659311_-	hypothetical protein	Q5ZQY9	Pseudomonas_phage	4.7e-09	33.3
WP_001104440.1\|659294_660035_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-62	51.4
WP_000793146.1\|660037_660388_-	membrane protein	A4JWP3	Burkholderia_virus	1.5e-22	53.0
WP_021526138.1\|660518_661247_+	hypothetical protein	NA	NA	NA	NA
WP_000972294.1\|661222_661627_-	hypothetical protein	NA	NA	NA	NA
WP_001069611.1\|661625_661841_+	hypothetical protein	NA	NA	NA	NA
WP_016238312.1\|662031_662799_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	4.5e-99	64.7
WP_016238311.1\|662851_663289_-	hypothetical protein	NA	NA	NA	NA
WP_016238310.1\|663248_664142_-	hypothetical protein	NA	NA	NA	NA
WP_016238309.1\|664264_664681_-	hypothetical protein	NA	NA	NA	NA
WP_016238308.1\|664769_664994_+	hypothetical protein	NA	NA	NA	NA
WP_016238307.1\|664990_665299_+	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	6.1e-23	54.9
WP_021526139.1\|665309_666221_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.9e-72	53.7
WP_021552089.1\|666224_667994_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	6.2e-229	68.5
WP_021552090.1\|668004_669171_+	AAA family ATPase	A4JWN1	Burkholderia_virus	2.8e-121	59.4
WP_000843445.1\|669173_669443_+	hypothetical protein	NA	NA	NA	NA
WP_001381528.1\|669470_670001_+	bacteriophage Mu Gam like family protein	L7P7T1	Pseudomonas_phage	1.2e-58	66.7
WP_021526141.1\|670289_670562_+	hypothetical protein	NA	NA	NA	NA
WP_000197789.1\|670571_670877_+	hypothetical protein	NA	NA	NA	NA
WP_000131941.1\|670873_671557_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	2.6e-34	37.3
WP_021526143.1\|671553_671784_+	hypothetical protein	NA	NA	NA	NA
WP_021526144.1\|671773_671989_+	hypothetical protein	NA	NA	NA	NA
WP_021552092.1\|671978_672431_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	7.3e-25	46.6
672049:672070	attR	NA	NA	NA	NA
WP_001281695.1\|672402_672792_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.5e-31	54.2

DBSCAN-SWA_3

725889 : 813294

118

Enterobacteria_phage(36.36%)

head,tRNA,holin,portal,transposase,integrase,tail,terminase,capsid,lysis

attL 749843:749858|attR 791341:791356

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000074983.1\|725889_727008_-\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	7.7e-84	44.2
WP_000003742.1\|726976_727246_-	excisionase	NA	NA	NA	NA
WP_000102155.1\|727307_729764_-	exonuclease	V5UQJ3	Shigella_phage	3.3e-103	42.6
WP_001093951.1\|729841_730045_-	DUF1482 family protein	NA	NA	NA	NA
WP_000450218.1\|730041_730230_-	cell division inhibitor	NA	NA	NA	NA
WP_000935596.1\|730240_731095_-	hypothetical protein	A0A0P0ZE80	Stx2-converting_phage	3.6e-65	63.2
WP_000394557.1\|731625_732000_-	hypothetical protein	NA	NA	NA	NA
WP_000379564.1\|732011_732164_-	DUF1391 family protein	NA	NA	NA	NA
WP_000787428.1\|732370_732778_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000912294.1\|732854_733082_+	transcriptional regulator	NA	NA	NA	NA
WP_000705383.1\|733065_733617_+	hypothetical protein	NA	NA	NA	NA
WP_000020541.1\|733588_734629_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.0e-90	87.2
WP_001309414.1\|734540_735083_+	hypothetical protein	A0A0U2JGJ0	Escherichia_phage	3.6e-79	90.2
WP_000450706.1\|735116_735887_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.1e-86	68.4
WP_001141099.1\|735902_736295_+	DUF977 family protein	A0A088CBK9	Shigella_phage	1.5e-39	63.3
WP_001266130.1\|736291_736588_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.2e-47	95.8
WP_001209475.1\|736584_737046_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	2.6e-38	94.0
WP_000403791.1\|737023_737380_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.1e-57	98.3
WP_000137947.1\|737475_737883_+	hypothetical protein	A0A0N7KZJ2	Stx2-converting_phage	6.1e-23	60.4
WP_001229301.1\|737884_738250_+	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	1.9e-68	99.2
WP_000208092.1\|738246_739233_+	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.8e-44	41.5
WP_001336454.1\|739314_739533_+	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|739791_739947_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001309416.1\|740163_740415_+	hypothetical protein	NA	NA	NA	NA
WP_001309417.1\|740481_740760_+	hypothetical protein	I6PCV7	Cronobacter_phage	6.3e-11	45.3
WP_001265256.1\|740761_741820_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.8e-90	48.3
WP_000140038.1\|741820_742189_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.4e-34	62.8
WP_001064909.1\|742181_742871_+	antiterminator	I6PDF8	Cronobacter_phage	7.1e-56	48.1
WP_001309418.1\|743083_743281_+	hypothetical protein	S5MQK8	Escherichia_phage	1.7e-26	93.8
WP_157835956.1\|743256_743370_+	DUF3927 family protein	NA	NA	NA	NA
WP_000871291.1\|743650_743986_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_001309419.1\|744231_744435_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	2.7e-27	96.8
WP_001309421.1\|744431_744593_+	hypothetical protein	Q08JA2	Stx2-converting_phage	1.6e-14	89.1
WP_063131903.1\|744742_744958_+\|holin	holin	A0A0P0ZFW5	Escherichia_phage	3.4e-33	98.6
WP_001037013.1\|744962_745853_+	YdfR family protein	Q08JA0	Stx2-converting_phage	1.2e-108	70.9
WP_001092866.1\|745889_746423_+	lysozyme	Q6H9V6	Enterobacteria_phage	6.7e-102	97.2
WP_001446668.1\|746579_746762_+	hypothetical protein	NA	NA	NA	NA
WP_001280932.1\|746776_746908_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	2.6e-07	79.1
WP_032142285.1\|746910_747378_+\|lysis	lysis protein	Q6H9V3	Enterobacteria_phage	6.7e-66	84.4
WP_000830178.1\|747688_748015_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_001322427.1\|748137_748491_-	hypothetical protein	NA	NA	NA	NA
WP_000235436.1\|748973_749483_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001309424.1\|749454_751383_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.4e-261	66.4
749843:749858	attL	NA	NA	NA	NA
WP_000258993.1\|751366_751573_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_001322425.1\|751569_753162_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.9e-185	61.1
WP_001253887.1\|753151_754600_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	9.9e-100	53.1
WP_000256814.1\|754636_754984_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.8e-23	59.1
WP_000522603.1\|755041_756070_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.4e-116	62.2
WP_000201530.1\|756121_756496_+	hypothetical protein	NA	NA	NA	NA
WP_001204533.1\|756488_756842_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.9e-41	70.1
WP_000974996.1\|756857_757391_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.5e-56	64.6
WP_000683079.1\|757387_757783_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000235048.1\|757790_758540_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	2.7e-125	93.8
WP_001309426.1\|758558_758990_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	7.4e-43	68.8
WP_000533401.1\|759016_759430_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	4.6e-42	82.8
WP_000082417.1\|759410_761972_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	87.5
WP_000847291.1\|761968_762298_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.1e-58	99.1
WP_001309428.1\|762297_762996_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	3.2e-128	96.6
WP_000194723.1\|763006_763750_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.0e-148	98.0
WP_122991350.1\|763695_764328_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	1.2e-102	96.7
WP_000514740.1\|764671_768364_+	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	85.6
WP_001233148.1\|768431_769031_+	Ail/Lom family protein	H6WZM8	Escherichia_phage	7.7e-107	94.0
WP_000216486.1\|769182_772209_+	membrane protein	A0A0K2FIZ6	Escherichia_phage	1.4e-55	54.6
WP_000885577.1\|772208_772793_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.6e-103	94.8
WP_000240999.1\|772847_773516_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937481.1\|773572_773839_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.5e-17	81.8
WP_000799406.1\|774070_774934_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000531594.1\|774917_776054_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
WP_001545930.1\|776303_777530_+	peptidase T	NA	NA	NA	NA
WP_001295435.1\|777578_778700_-	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000735412.1\|778775_780236_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001265481.1\|780235_780907_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000423736.1\|781075_782446_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	7.9e-107	44.9
WP_001295971.1\|782449_783091_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_001295972.1\|783126_784233_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|784286_784748_-	phosphatase NudJ	NA	NA	NA	NA
WP_001248677.1\|784757_785411_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444487.1\|785582_786833_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_000741335.1\|786946_788089_-\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	3.6e-206	100.0
WP_000088653.1\|788078_788315_-	excisionase	NA	NA	NA	NA
WP_000488406.1\|788454_788694_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	3.9e-38	94.9
WP_000763364.1\|788741_788960_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	1.8e-34	95.8
WP_001308571.1\|789058_789340_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	1.2e-46	97.8
WP_000548537.1\|789350_789542_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
WP_077881675.1\|789519_789696_-	DUF1317 family protein	A0A1U8QQC1	Enterobacteria_phage	6.5e-22	98.0
WP_000186858.1\|789692_790373_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	4.6e-132	99.6
WP_000100847.1\|790369_791155_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995417.1\|791160_791457_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.5e-47	96.9
791341:791356	attR	NA	NA	NA	NA
WP_000233576.1\|791532_791739_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000866321.1\|792214_792592_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	1.3e-30	49.2
WP_000380252.1\|792569_793631_-	hypothetical protein	Q6SE88	Lactobacillus_prophage	2.9e-64	42.0
WP_000712396.1\|793711_794404_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.5e-109	85.3
WP_000184665.1\|794514_794742_+	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	3.8e-22	69.0
WP_001182881.1\|794772_795312_+	hypothetical protein	M9NZI6	Enterobacteria_phage	8.9e-62	66.7
WP_001441930.1\|795398_796328_+	replication protein	A0A0M5M7Y1	Salmonella_phage	1.9e-112	64.7
WP_000788877.1\|796324_797026_+	Replication protein 14	K7P6G2	Enterobacteria_phage	9.9e-130	100.0
WP_000145918.1\|797022_797325_+	protein ren	A0A0N6WES4	Escherichia_phage	1.3e-41	93.5
WP_001070442.1\|797392_797725_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_032143398.1\|797773_797923_+	hypothetical protein	NA	NA	NA	NA
WP_000709098.1\|797980_799507_+	recombinase family protein	Q3HQV4	Burkholderia_phage	2.7e-31	30.8
WP_000700204.1\|799856_800900_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_072093903.1\|801249_801351_+	hypothetical protein	NA	NA	NA	NA
WP_001053004.1\|801347_801803_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	1.2e-59	66.9
WP_000224907.1\|801802_801973_+	hypothetical protein	K7P7K0	Enterobacteria_phage	5.3e-13	67.9
WP_000774475.1\|801965_802256_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	1.3e-46	93.8
WP_001099697.1\|802252_802615_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	7.3e-60	95.7
WP_000971095.1\|802611_802752_+	YlcG family protein	K7PHH3	Enterobacteria_phage	1.7e-09	72.1
WP_001204794.1\|802837_803221_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	2.0e-55	82.5
WP_000737277.1\|803409_804492_-	porin OmpC	Q1MVN1	Enterobacteria_phage	4.1e-167	79.0
WP_001545960.1\|805488_807417_+	hypothetical protein	A0A0E3M194	Enterobacteria_phage	7.5e-111	60.1
WP_000422741.1\|807498_807924_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_000624722.1\|807920_808271_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000080195.1\|808301_809915_+\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_000654168.1\|810082_810361_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	7.6e-25	57.6
WP_000355360.1\|810373_810667_+	hypothetical protein	NA	NA	NA	NA
WP_000968127.1\|810758_811616_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_001101732.1\|811612_812470_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_000983701.1\|812466_813294_-	iron/manganese ABC transporter ATP-binding protein SitB	M1HV27	Acanthocystis_turfacea_Chlorella_virus	8.7e-08	27.7

DBSCAN-SWA_4

1518554 : 1595856

Escherichia_phage(40.0%)

head,terminase,holin,portal,transposase,integrase,tail,protease,capsid

attL 1574911:1574925|attR 1596545:1596559

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032143406.1\|1518554_1519094_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.3e-32	58.3
WP_000879825.1\|1519250_1520048_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001310919.1\|1520057_1520609_-	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_001070440.1\|1520777_1521110_-	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_001274299.1\|1521453_1521768_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_000994422.1\|1521982_1523641_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_000067950.1\|1523633_1524629_+	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_001282656.1\|1524621_1525308_+	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000213294.1\|1525307_1526681_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_000807584.1\|1526699_1527143_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000133106.1\|1528370_1528835_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_001295641.1\|1528839_1529844_+	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_001282103.1\|1529840_1530254_+	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_001313947.1\|1530256_1530622_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001253318.1\|1530621_1531359_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_000187358.1\|1531368_1531638_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_000983988.1\|1531646_1532432_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000103980.1\|1532721_1533345_+	transcriptional regulator RcsA	NA	NA	NA	NA
WP_071524607.1\|1533388_1533631_-	protein DsrB	NA	NA	NA	NA
WP_000844800.1\|1533739_1533967_+	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_000491480.1\|1534264_1535080_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_001545998.1\|1535076_1536771_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.9e-17	34.5
WP_000009302.1\|1536941_1537124_-	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_000922683.1\|1537202_1538120_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_001212226.1\|1538292_1539213_+	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000228686.1\|1539201_1539672_-	VSPR family DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	5.2e-34	48.3
WP_001157268.1\|1539652_1541071_-	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-101	55.1
WP_001527153.1\|1541137_1541833_-	phosphohydrolase	S4W232	Pandoravirus	1.6e-07	28.7
WP_001330593.1\|1541872_1542238_-	hypothetical protein	NA	NA	NA	NA
WP_000824389.1\|1542803_1543862_+	outer membrane protein F	Q1MVN1	Enterobacteria_phage	2.5e-92	49.1
WP_000218225.1\|1544456_1545308_+	protein deglycase HchA	NA	NA	NA	NA
WP_000826725.1\|1545415_1546774_-	two-component system sensor histidine kinase HprS	NA	NA	NA	NA
WP_024175729.1\|1546773_1547445_-	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	1.2e-31	34.7
WP_000920127.1\|1547577_1547991_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_000740055.1\|1548099_1549104_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_001240061.1\|1549104_1549740_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_001007774.1\|1549997_1550648_+	metal-binding protein ZinT	NA	NA	NA	NA
WP_000355608.1\|1551731_1552019_-	hypothetical protein	NA	NA	NA	NA
WP_000235967.1\|1552029_1552734_-\|tail	tail fiber domain-containing protein	A0A1X7QGH6	Escherichia_phage	1.2e-58	61.7
WP_000654154.1\|1552743_1553025_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.2e-17	47.8
WP_001545999.1\|1553021_1555421_-\|tail	phage tail fiber protein	A0A0E3M194	Enterobacteria_phage	3.9e-133	55.3
WP_001228252.1\|1555485_1556085_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	3.4e-102	92.5
WP_063131909.1\|1556152_1559632_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.5
WP_021539543.1\|1559692_1560340_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.2e-110	96.3
WP_032202024.1\|1560237_1560981_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.9e-143	93.1
WP_001152456.1\|1560985_1561684_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	4.4e-130	96.6
WP_001330090.1\|1561683_1562040_-\|tail	tail protein	A0A0P0ZDL9	Stx2-converting_phage	2.8e-40	66.7
WP_001546000.1\|1562017_1565245_-\|tail	phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	95.8
WP_071590020.1\|1565291_1565552_-	DUF4035 domain-containing protein	A0A1B5FP87	Escherichia_phage	1.6e-40	97.7
WP_000164664.1\|1565593_1565965_-	hypothetical protein	A0A1B5FP91	Escherichia_phage	5.5e-63	99.2
WP_000097526.1\|1565979_1566684_-	immunoglobulin domain-containing protein	A0A1B5FP82	Escherichia_phage	3.7e-116	94.4
WP_001546001.1\|1566744_1567089_-	DUF3168 domain-containing protein	A0A1B5FP84	Escherichia_phage	2.3e-55	96.5
WP_014639219.1\|1567085_1567535_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	1.0e-63	80.5
WP_001147814.1\|1567531_1567870_-\|head	phage head closure protein	A0A1B5FP90	Escherichia_phage	7.5e-51	90.2
WP_000719066.1\|1567878_1568196_-\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	6.2e-23	50.5
WP_000766108.1\|1568272_1569490_-\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	1.7e-161	71.4
WP_000999828.1\|1569504_1570104_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.9e-89	81.0
WP_000923131.1\|1570096_1571323_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	4.1e-203	82.8
WP_001140892.1\|1571470_1573228_-\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	99.3
WP_001317918.1\|1573227_1573710_-\|terminase	phage terminase small subunit P27 family	A0A1B5FPA0	Escherichia_phage	5.7e-84	97.5
WP_001532429.1\|1573858_1574209_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	1.4e-63	96.6
WP_001532432.1\|1574347_1574887_+	hypothetical protein	NA	NA	NA	NA
WP_001100260.1\|1574892_1575159_-	hypothetical protein	NA	NA	NA	NA
1574911:1574925	attL	NA	NA	NA	NA
WP_001228685.1\|1575376_1575562_-	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	6.4e-20	80.3
WP_000992100.1\|1575778_1576312_-	lysozyme	Q08J98	Stx2-converting_phage	3.6e-100	94.4
WP_000193280.1\|1576375_1576726_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.9e-37	95.2
WP_000839572.1\|1576730_1576946_-\|holin	holin	M1FN85	Enterobacteria_phage	5.3e-34	98.6
WP_001064894.1\|1577741_1578431_-	antiterminator	I6PDF8	Cronobacter_phage	9.6e-61	51.1
WP_000140004.1\|1578427_1578793_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	3.2e-39	67.5
WP_024188444.1\|1578793_1579849_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	7.5e-89	48.1
WP_024175747.1\|1579850_1580129_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.1e-12	50.0
WP_000737636.1\|1580425_1580818_-	hypothetical protein	NA	NA	NA	NA
WP_001013636.1\|1580961_1581174_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	8.9e-26	96.9
WP_000206826.1\|1581407_1581752_-	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	3.8e-58	99.1
WP_000207997.1\|1581748_1581916_-	hypothetical protein	A0A192Y6F5	Salmonella_phage	2.1e-14	89.4
WP_000224227.1\|1581926_1582190_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_000206712.1\|1582191_1582632_-	hypothetical protein	A0A2I6PID2	Escherichia_phage	2.0e-19	50.3
WP_001514293.1\|1582633_1582993_-	hypothetical protein	A0A076GCN9	Escherichia_phage	1.6e-38	74.5
WP_021539545.1\|1583158_1583341_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	6.9e-27	98.3
WP_072189218.1\|1583434_1583833_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	5.7e-58	98.3
WP_001514296.1\|1583792_1584329_-	hypothetical protein	A0A2I6TD51	Escherichia_phage	6.3e-52	97.9
WP_001514297.1\|1584321_1584621_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	5.6e-50	97.0
WP_001514298.1\|1584617_1585040_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.7e-66	92.1
WP_001514299.1\|1585080_1586151_-	hypothetical protein	A0A088CD36	Shigella_phage	3.2e-63	65.2
WP_000693853.1\|1586222_1586648_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001261754.1\|1586644_1586872_-	cell division control protein	NA	NA	NA	NA
WP_000444613.1\|1586971_1587616_+	LexA family transcriptional regulator	A0A1P8DTH0	Proteus_phage	8.8e-08	25.9
WP_000379575.1\|1587893_1588049_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_001171947.1\|1588208_1588427_+	hypothetical protein	NA	NA	NA	NA
WP_001296188.1\|1588430_1588595_-	hypothetical protein	NA	NA	NA	NA
WP_000854558.1\|1588994_1589183_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001070256.1\|1589179_1589371_+	DUF1482 family protein	NA	NA	NA	NA
WP_032166410.1\|1589464_1591936_+	exonuclease	K7PLW7	Enterobacteria_phage	3.8e-59	60.9
WP_000096344.1\|1591994_1592198_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533615.1\|1592197_1593223_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	3.4e-102	57.9
WP_001311896.1\|1593458_1594256_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_024175719.1\|1594593_1595856_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	4.1e-73	38.8
1596545:1596559	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1719150 : 1727821

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000272486.1\|1719150_1720254_-	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	1.0e-133	59.5
WP_001393538.1\|1720261_1721509_-	O16 family O-antigen flippase	NA	NA	NA	NA
WP_001100981.1\|1721505_1722063_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	7.8e-53	57.5
WP_000783975.1\|1722062_1722944_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.9e-106	63.8
WP_001023617.1\|1723001_1723901_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	6.3e-28	34.5
WP_000699450.1\|1723900_1724986_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.9e-101	53.9
WP_000183060.1\|1725358_1726252_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_001115960.1\|1726426_1727821_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.3e-19	31.9

DBSCAN-SWA_6

2398651 : 2405791

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000103863.1\|2398651_2401213_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
WP_001141293.1\|2401318_2401975_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	3.3e-50	46.1
WP_001272542.1\|2402025_2402823_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.2e-69	57.0
WP_000847996.1\|2402988_2403897_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.9e-117	76.2
WP_000590411.1\|2403893_2405156_+	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001279004.1\|2405152_2405791_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	74.5

DBSCAN-SWA_7

2655060 : 2722105

Pseudomonas_phage(25.0%)

protease,tRNA,transposase,integrase

attL 2656269:2656286|attR 2720599:2720616

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001546095.1\|2655060_2655819_+\|protease	metalloprotease LoiP	NA	NA	NA	NA
WP_000105562.1\|2656248_2657169_-	agmatinase	NA	NA	NA	NA
2656269:2656286	attL	NA	NA	NA	NA
WP_000758881.1\|2657304_2658036_-	hypothetical protein	NA	NA	NA	NA
WP_001295380.1\|2658181_2660158_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
WP_001297406.1\|2660166_2660298_-	acid stress response protein YqgB	NA	NA	NA	NA
WP_001331575.1\|2660433_2660649_+	hypothetical protein	NA	NA	NA	NA
WP_001062128.1\|2660952_2662107_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
WP_001112301.1\|2662543_2663938_+	galactose/proton symporter	NA	NA	NA	NA
WP_000858396.1\|2664014_2664512_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_001305312.1\|2664606_2665314_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001531929.1\|2665393_2666125_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593260.1\|2666137_2667088_+	glutathione synthase	NA	NA	NA	NA
WP_000126436.1\|2667124_2667760_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017111.1\|2667759_2668176_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001546096.1\|2668354_2669335_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|2669352_2670057_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|2670074_2670641_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|2670637_2670928_+	YggU family protein	NA	NA	NA	NA
WP_001174747.1\|2670935_2671529_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239978.1\|2671521_2672658_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000745201.1\|2672726_2673734_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394125.1\|2673850_2674897_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|2675072_2675792_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001107564.1\|2675975_2676302_-	YggL family protein	NA	NA	NA	NA
WP_000786911.1\|2676301_2677021_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001376017.1\|2677181_2678234_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|2678261_2678537_+	oxidative damage protection protein	NA	NA	NA	NA
WP_001618095.1\|2678600_2679680_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001327414.1\|2679881_2681138_+	nucleoside permease NupG	NA	NA	NA	NA
WP_001546097.1\|2681186_2683322_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234526.1\|2683714_2684422_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218869.1\|2684800_2686066_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
WP_000147017.1\|2686321_2687365_+	hypothetical protein	NA	NA	NA	NA
WP_001774069.1\|2689058_2689610_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000006213.1\|2692101_2692335_+	Major pilus subunit operon regulatory protein	NA	NA	NA	NA
WP_023146305.1\|2692801_2693017_+	hypothetical protein	A0A0N7C1Y0	Escherichia_phage	1.7e-27	85.2
WP_001189123.1\|2693461_2694970_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
WP_001513409.1\|2696472_2696586_-	hypothetical protein	NA	NA	NA	NA
WP_001110186.1\|2698419_2698680_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000109147.1\|2698721_2699282_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001296373.1\|2699321_2699750_+	DUF417 family protein	NA	NA	NA	NA
WP_103103190.1\|2700458_2701686_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.2e-170	95.3
WP_000074472.1\|2701799_2702993_-	MFS transporter	NA	NA	NA	NA
WP_001296374.1\|2703128_2704853_+	aerobactin synthase IucA	NA	NA	NA	NA
WP_001287500.1\|2704853_2705801_+	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001015715.1\|2705800_2707543_+	aerobactin synthase IucC	NA	NA	NA	NA
WP_000750130.1\|2707539_2708817_+	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_000973516.1\|2708898_2711100_+	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_001546100.1\|2712043_2715931_+\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	7.5e-227	38.8
WP_001189123.1\|2717652_2719161_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
WP_032212789.1\|2721250_2722105_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-68	45.4
2720599:2720616	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015077

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP015076

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection