CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015227	Enterobacter sp. ODB01 chromosome, complete genome	1 crisprs	DEDDh,csa3,cas3,WYL,DinG	1	4	6	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015227_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015227_1

2375095-2375723

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRT
CACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder

10 spacers

The CRISPR arrays of NZ_CP015227_1

>merge|NZ_CP015227|1|2375095-2375723|CRT,CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAATGTTCCGACACTGCGTTACCCGTCAGCTGCGCCGTTCACTGCCGTACAGGCAGCTTAGAAATGCAAAAATCCGCCACGTAATCAAGACTCGACGTTCACTGCCGTACAGGCAGCTTAGAAAGTTGGCAGTGGGTTCACTCTCACAACGCCTGAGTTCACTGCCGTACAGGCAGCTTAGAAATCTTCAGGCATGTTGCAAATATGAACGCGATCGTGCACTGCCGTACAGGCAGCTTAGAAAAATCACGATAGTCCGGAGTATCGAAACTCTCAGTTCACTGCCGTACAGGCAGCTTAGAAATCTTTAATCCGAGCCTCAAGGACATCGTTTGTGTTCACTGCCGTACAGGCAGCTTAGAAAGAAAACCTCCTGCACGGAGGCGCGAAAACAGATTTCATTGCCGTACAGGCAGCTTAGAAAAGTCCGACACTGTGTTTCCGTCTGTTCAGTACGTTCACTGCCGTACAGGCAGCTTAGAAAACAATCTGAACTCCTTACCTTGTCACAGATGCGCTTAGTGCAATACAGGCAGCTTATAAAGTCGCGGAATACAACGACGCCATCTATCAATAGTTCACTGCCGTACACGCAGCAACCATA

>NZ_CP015227|1|1|2375095-2375663|CRT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTTCCGACACTGCGTTACCCGTCAGCTGCGCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCAAAAATCCGCCACGTAATCAAGACTCGAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTGGCAGTGGGTTCACTCTCACAACGCCTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCTTCAGGCATGTTGCAAATATGAACGCGATC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AATCACGATAGTCCGGAGTATCGAAACTCTCA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCTTTAATCCGAGCCTCAAGGACATCGTTTGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GAAAACCTCCTGCACGGAGGCGCGAAAACAGA
TTTCATTGCCGTACAGGCAGCTTAGAAA	AGTCCGACACTGTGTTTCCGTCTGTTCAGTAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACAATCTGAACTCCTTACCTTGTCACAGATGC
GCTTAGTGCAATACAGGCAGCTTATAAA

>NZ_CP015227|1|1|2375098-2375723|CRISPRCasFinder
CACTGCCGTACAGGCAGCTTAGAAA	TGTTCCGACACTGCGTTACCCGTCAGCTGCGCCGTT
CACTGCCGTACAGGCAGCTTAGAAA	TGCAAAAATCCGCCACGTAATCAAGACTCGACGTT
CACTGCCGTACAGGCAGCTTAGAAA	GTTGGCAGTGGGTTCACTCTCACAACGCCTGAGTT
CACTGCCGTACAGGCAGCTTAGAAA	TCTTCAGGCATGTTGCAAATATGAACGCGATCGTG
CACTGCCGTACAGGCAGCTTAGAAA	AATCACGATAGTCCGGAGTATCGAAACTCTCAGTT
CACTGCCGTACAGGCAGCTTAGAAA	TCTTTAATCCGAGCCTCAAGGACATCGTTTGTGTT
CACTGCCGTACAGGCAGCTTAGAAA	GAAAACCTCCTGCACGGAGGCGCGAAAACAGATTT
CATTGCCGTACAGGCAGCTTAGAAA	AGTCCGACACTGTGTTTCCGTCTGTTCAGTACGTT
CACTGCCGTACAGGCAGCTTAGAAA	ACAATCTGAACTCCTTACCTTGTCACAGATGCGCT
TAGTGCAATACAGGCAGCTTATAAA	GTCGCGGAATACAACGACGCCATCTATCAATAGTT
CACTGCCGTACACGCAGCAACCATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015227.1\|WP_045281072.1\|2362177_2362663_+\|type-II-secretion-system-protein-M	unknown	unknown	gnl\|CDD\|377391
NZ_CP015227.1\|WP_045268543.1\|2371584_2372586_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|236710
NZ_CP015227.1\|WP_023332529.1\|2384578_2386519_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP015227.1\|WP_023332523.1\|2372624_2374343_-\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP015227.1\|WP_045281068.1\|2370134_2371574_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187556
NZ_CP015227.1\|WP_014883183.1\|2366529_2366970_+\|type-III-secretion-system-invasion-protein-IagB	unknown	unknown	gnl\|CDD\|185228
NZ_CP015227.1\|WP_023332524.1\|2374494_2374929_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|311556
NZ_CP015227.1\|WP_023337002.1\|2375864_2376833_-\|NADH-oxidoreductase	unknown	unknown	gnl\|CDD\|236735
NZ_CP015227.1\|WP_023336996.1\|2367103_2368927_+\|endochitinase	unknown	unknown	gnl\|CDD\|381595
NZ_CP015227.1\|WP_045281071.1\|2362659_2363457_+\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|224900
NZ_CP015227.1\|WP_045268545.1\|2363711_2366426_+\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|119365
NZ_CP015227.1\|WP_014883194.1\|2380695_2382354_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP015227.1\|WP_023332528.1\|2382350_2383307_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|377343
NZ_CP015227.1\|WP_014883193.1\|2379710_2380406_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP015227.1\|WP_045281069.1\|2369031_2370045_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP015227.1\|WP_014883196.1\|2383466_2384582_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP015227.1\|WP_006174393.1\|2387078_2387399_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP015227.1\|WP_008499993.1\|2386589_2386811_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP015227.1\|WP_023332526.1\|2378640_2379540_-\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP015227.1\|WP_014883191.1\|2376843_2378496_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391

Protein	Function_ID	Function_description	E-value
NZ_CP015227.1\|WP_045281072.1\|2362177_2362663_+\|type-II-secretion-system-protein-M	gnl\|CDD\|377391	pfam04612, T2SSM, Type II secretion system (T2SS), protein M. This family of membrane proteins consists of Type II secretion system protein M sequences from several Gram-negative (diderm) bacteria. The precise function of these proteins is unknown, though in Vibrio cholerae, the T2SM (EpsM) protein interacts with the T2SL (EpsL) protein, and also forms homodimers.	1.94451e-30
NZ_CP015227.1\|WP_045268543.1\|2371584_2372586_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|236710	PRK10534, PRK10534, L-threonine aldolase; Provisional.	0
NZ_CP015227.1\|WP_023332529.1\|2384578_2386519_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP015227.1\|WP_023332523.1\|2372624_2374343_-\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP015227.1\|WP_045281068.1\|2370134_2371574_-\|SDR-family-oxidoreductase	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.61094e-139
NZ_CP015227.1\|WP_014883183.1\|2366529_2366970_+\|type-III-secretion-system-invasion-protein-IagB	gnl\|CDD\|185228	PRK15328, PRK15328, type III secretion system invasion protein IagB.	3.40358e-90
NZ_CP015227.1\|WP_023332524.1\|2374494_2374929_+\|DoxX-family-protein	gnl\|CDD\|311556	pfam07681, DoxX, DoxX. These proteins appear to have some sequence similarity with pfam04173 but their function is unknown.	4.72814e-11
NZ_CP015227.1\|WP_023337002.1\|2375864_2376833_-\|NADH-oxidoreductase	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
NZ_CP015227.1\|WP_023336996.1\|2367103_2368927_+\|endochitinase	gnl\|CDD\|381595	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.	3.72438e-71
NZ_CP015227.1\|WP_045281071.1\|2362659_2363457_+\|prepilin-peptidase	gnl\|CDD\|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	6.10162e-41
NZ_CP015227.1\|WP_045268545.1\|2363711_2366426_+\|glycoside-hydrolase	gnl\|CDD\|119365	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.	1.68791e-125
NZ_CP015227.1\|WP_014883194.1\|2380695_2382354_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP015227.1\|WP_023332528.1\|2382350_2383307_-\|DUF535-domain-containing-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	4.41395e-123
NZ_CP015227.1\|WP_014883193.1\|2379710_2380406_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	2.15557e-146
NZ_CP015227.1\|WP_045281069.1\|2369031_2370045_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	2.8156e-51
NZ_CP015227.1\|WP_014883196.1\|2383466_2384582_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP015227.1\|WP_006174393.1\|2387078_2387399_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	9.90991e-48
NZ_CP015227.1\|WP_008499993.1\|2386589_2386811_-\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	6.50125e-48
NZ_CP015227.1\|WP_023332526.1\|2378640_2379540_-\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	4.1808e-112
NZ_CP015227.1\|WP_014883191.1\|2376843_2378496_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0

>NZ_CP015227.1|WP_023332524.1|2374494_2374929_+|DoxX-family-protein
MVKSLLIAVNEKLSCDDLGKLLLRLAVGGLMLFHGLHKLFGGVGFISGMLVEKGLPGFIAYGVLIGEVVAPMLIIVGLFTRPAALMLAFTMIVAWLMVGMGETLALDKVGAWAIESLVYFFIGSLAVAFLGAGRFALGKAPAWR
>NZ_CP015227.1|WP_023332523.1|2372624_2374343_-|ubiquinone-dependent-pyruvate-dehydrogenase
MKQTVAAYIAKTLEQAGVKRIWGVTGDSLNGLSDSLNKMKTIEWMPTRHEEVAAFAAGAEAQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVIPGDVALKSAPEGASTHWYHAPQPVVTPAEEELKKLAQLLRYSSNIALMCGSGCAGAHKELLEFAGKLKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQFPYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLAALLPLLEEKTDRAFLDKALSDYRDARKGLDDLAKPSDKAIHPQYLAQQISHFADDDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAKATAPERQVVAMCGDGGFSMLMGDFLSVVQMKLPLKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASDVDEALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELAKTNWLR
>NZ_CP015227.1|WP_045268543.1|2371584_2372586_-|low-specificity-L-threonine-aldolase
MIDLRSDTVTRPSRAMLEEMMAAPVGDDVYGDDPTVNALQRYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAPDGTLPLDKVAAKIKADDIHFARTKLLSLENTHNGKVLPREYLKAAWDFTRERKLGLHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNADYIKRANRWRKMTGGGMRQAGILAAAGLYALKNNVARLKDDHDNAAWMATQLREIGADVMRHDTNMLFIRVGDEHAAALGEFMKARGVLINASPVVRLVMHLDVNREQLAEVVKHWQAFLQR
>NZ_CP015227.1|WP_045281068.1|2370134_2371574_-|SDR-family-oxidoreductase
MPQRILVLGASGYIGQHLTTALSQRGHQVLAAARNTDRLQKLALPGVTCHNVDLNWPKALPALLEEVDTLYYLVHSMGEGGDFIAHERQVALNVRDALLQTPVKQVIFLSSLQAPESEQSDHLRARQLTADTLRGANIPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALANLLHYLVALLDHPAEQHRVLEAAGPEVLSYQQQFEHFMRVSGRRRWLIPIPFPTRWISVWFLNVITSVPPTTAKALIQGLKHDLLADDRELRALIPQDLIRFDDAVRNTLKEEEQLVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVKTSASLEALWEVVNQIGGKERYFFGNLLWQTRGTMDLLVGHRLAKGRPARPYLEVGDAVDSWKVIIVEPEKQLALLFGMKAPGLGRLCFTLKDKGDRRELDVRAWWHPHGMPGLFYWLFMIPAHLFIFRGMAKRIAQLAEQKTKITH
>NZ_CP015227.1|WP_045281069.1|2369031_2370045_-|NAD(P)-dependent-oxidoreductase
MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLQKMGAEFVHANLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQEAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDVQEDFRPARFACEFARSKAASEEVIDLLAQSNPHTRFTVLRPQSLFGPHDKVFIPRLAQMMHHYGSVLLPRGGDALVDMTYYENAVHAMWLASQPDCDKLISGRAYNITNGEPCTLRSIVQRLIDELQIDCRIRSVPYPMLDMIARSMERFGSKAAKEPALTHYGVSKLNFDFTLDISRAENELGYRPVVTLDEGIVRTAAWLRDHGKLHR
>NZ_CP015227.1|WP_023336996.1|2367103_2368927_+|endochitinase
MNKRTLLSVLVAGACVAPFMAQAASLQATTSEPYTMNASDLAKKEKELTSFPLMDAVKETIKTLDNAQVELIEPGRAANPENVKRVEGIVKASDWEYLFPLRAQAYTYSNFLKAVGKFPALCKTYNDGRDSDAICRKELATMFAHFAQETGGHESWRPEAEWRQALVHVREMGWSEGQKGGYNGECNPDVWQGQTWPCGKDKDGDFLSYFGRGAKQLSYNYNYGPFSEAMYGDVRTLLDKPELVADTWLNLASAIFFFAYPQPPKPSMLQVIDGTWQPNDHDKANGLVPGFGVTTQIINGGVECGGPTEIAQSENRIKYYKEFANYLKVPVPANEVLGCANMKQFDEGGAGALKIYWEQDWGWSADTPSGETYSCQLVGYQTPFSAFKEGDYSKCVQKFFNVNIVNDDGSVTPDETPVTPTPTPSEDETPAPAPVPDETPAEPAVVNHAPVAHIAGPIGAVEAGAHVSLSAEGSTDADGNALTYTWRSQDGQTVTGQDKAVVTFTAPESATAQQIEISLTVSDGELSSTTSYLLNVKAKAAPSQDEGTSGDYAAWSANSKYKAGDIVNNHGKLFQCKPFPYSGWCNNAPAYYEPGAGLAWSDAWTAL
>NZ_CP015227.1|WP_014883183.1|2366529_2366970_+|type-III-secretion-system-invasion-protein-IagB
MKKLIFLLLIISQSALANCWDKAAHYYHVDPYLLYAIANVESGMNPYAVGRNHDGTRDVGLMQINSSHFSALESRGIDEYRLITEPCTSIMVGASILSSMIKVYGYNWEAVGAYNAGLKKENYPQRMIYAHKVWKKYQELKATANE
>NZ_CP015227.1|WP_045268545.1|2363711_2366426_+|glycoside-hydrolase
MNFMKPKYLALFIAAATSSAFAAAPGAPSIGSGNDKFALVEVDQAAQDYNSLVKVHNDGVDVKVEWNVWSGDAPTSAKVLLDGKTVWTGAGGAAGSATFKVKKGGRYQEQVEVCNNSGCTKSASKLIIVADTDGSHLLPLNTTMHENNKSFAQHTDKVVAAYFPEWGVYDRNFPVDKIPAANLNHILYGFIPICGGDGINDGLKTVEGGNSYGVLQRDCQGRPDFTVAIHDPWAALQKPQAGVSNWDDPYKGNFGQLMALKKAHPDLKVLPSIGGWTLSDPFFHMGDPAIRARFVSSVKDFLQTWKFFDGVDIDWEFPGGGGVTETKGNPQQDKATYTALMHDLRAMLNELSAQTGRTYELTSAIGAGKDKIEDVDYTTAQQYLDHIFLMSYDFYGGWSNTELGHQAALHAPAWRPDTNYTTENGVDALLQQGVQPGKIVVGAGMYGRGWTGVHGYTGNNPFTGTATGMVRGTWEPGVVDYRQIVNEYKGKPGWEYGYDADAEAPYVFNKTTGDLITYEDARSTAAKGKYVLQKNLGGLFAWSIDSDTGDILNAMNESLLGGGSTPVDPVVTNHAPIASSADQNVSGPATVTLDGSASSDPDGDAITYKWTQVSGPSVTLTNSTKAKATFNVAAATSDQTMVFRLTVTDAKGLSNAIDVQVVNKAPKANQAPVVNPMEAVTLQAGETYVVHAQAADPDGDNLTYTWSVPADMHATGTDTANVTITAPEVASTSSYTLSVVVGDGKTSVQSNVQVTVNPKPADVTPPADDVTPPSDEVTPPADDVTPPSDEGTATGSCDAPVDANAGNYAAWDSSKIYNTGDTVSFDHLVWKAKYWTQGNQPGFGVDAWELASNVKMNWRSDLVYNGGETTTYQGNVYRAKWWTRGDNPANSDVWVKEGPATDCQ
>NZ_CP015227.1|WP_045281071.1|2362659_2363457_+|prepilin-peptidase
MNSVALMRDVYLVGFAIASAVLGGMVGSFLGVVAERVPAMVREEEGCGNLLFPSSHCPVCQHALAAWENIPLVSWLLLRGRCSQCKTAIPLRIFLVELVSALFFGLTAWCMPDVQALFSLWLLAGFLLPLTMIDWRHQLLPDCLTQPLLWAGLLLHAFDHQLPLRDALLGAVAGYMSLWLLYWAFRLATGREGLGYGDFKLLAALGAWCGWQALPSIELAAALSGIVGYFALNNLNKNNLTISFGPYLSFAGIVVFIGQQFAFIF
>NZ_CP015227.1|WP_045281072.1|2362177_2362663_+|type-II-secretion-system-protein-M
MKQRIAQLKSRYQNYSAREKVILKICAAALLGAAVYYAGVMPLDNMIQNSASTLARQKETLNWMRSEIDKNHLQVQVTKTNNPRALVENSAQEIHLPLTDVHQDGQTLSFVVSRVNVYELKNWLREINQTSGVRLQKMNLTPVDHLSDVKAEVQLTWGETA
>NZ_CP015227.1|WP_023337002.1|2375864_2376833_-|NADH-oxidoreductase
MTMPTSQCPWRMQVHHIHQETPDVWTLSLICHDYYPYRAGQYALVSVRHSADTLRAYTISSTPGVSEYITLTIRRIDDGAGSQWLTRDVKRGDYIWLSDAQGDFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVQVIFSVRSPEDVIFAEEWRNYPVTLVAEHNAVHGFVPGRLSRELLQSVPDIAHRTVMTCGPAPYMDIVEKEVKALGVTRFFKEQFFTPVAEAATSGIQFTKLQPAQTFFGRVGTTLLEALESNKVPVVAACRAGVCGCCKTKVVSGEYTVTSTMTLSDAEIAEGYVLACSCHPQGDLVLA
>NZ_CP015227.1|WP_014883191.1|2376843_2378496_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAFKAREYGIVDHYVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLNADANARVDNPMSELQLASDDLGDLQRQAADFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFRVMSILDAGETSTYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLKQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRETLLGAADSLIDLVSREKLRHIFLVGGCDGARGERNYFTDFATSVPDDCLILTLACGKYRFNKLDFGNIEGLPRLIDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVTNIVTGPTAPGFLTPDLLAVLNEKFGLRSVTNVEDDMKQLLSA
>NZ_CP015227.1|WP_023332526.1|2378640_2379540_-|lysine-exporter-LysO-family-protein
MFSGLLIILLPLIAGYLIPLRQESALRLINRFLSGIVYLILFFMGISLAFLDNLSANLLSILHYSAVTVTVILLCNIAALLWLERTIPWKNHHLQEKLPSRIAMALESLKLCGVVVLGFLLGLTGWAFLRHATEASEYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMIIAVMVVASSMVAGVINAFILDLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRSGGLEMVPAAIVHGFILSLLVPILMAFFSA
>NZ_CP015227.1|WP_014883193.1|2379710_2380406_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKDVIGYIVAQVVGGIIAAGVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKHAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLFWVMPIIGGILGGVLYRTLLEKRD
>NZ_CP015227.1|WP_014883194.1|2380695_2382354_+|ATP-dependent-endonuclease
MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEDDLYHFVHDDFWFPPGDVTGREKHLHIILTFRESEPGRHRVRRFRPLSPCWVPCDDDFHRIFYRLEGEMAENEGVLTLREFLDEKANPIPLDNIDDLARHLTRLTPVLRLRDARFMRRIRNGTVPNMPEVEVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTSESRHRLMRRRSHDEQRSWRYLDIINRMIDRPGGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLHPIMLSVAWHLLNLLPLQRITTTNSGELLSMTPVEHICRLVRESSRVSAYRLGPGGLNAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYASTVRSLLNNEREEERDHLTMLPAMDMEHFMYRQGFDDVFHRIAMVPVDVPMNMRRVIAKAIHRSSKPDLAIEVATEAGRRGVEAVPTLLRKMFSRVLWLARGRAD
>NZ_CP015227.1|WP_023332528.1|2382350_2383307_-|DUF535-domain-containing-protein
MSSIVDTPYSPLTQPASGWQLFKNLALGKLTPGLAWQNPAYRRKFVLRSLAAPVTTSRLLTRLAKQPRLMQILQAQPGLPCRMHRPWLTVNMERQHALESLNWHYQIMSRQLPATLLQGYLSKQGATLLTLTGKDEQHFTVRLCADAFMDKEGEATLVFCDDQNTVLAEITFTLCPFAGKSTLFIGGLQGAKAHVPHERIQKATKACHGLFPKRLLVETAMTLGAAFPVEQIVAVSNDTHIYRSWRYRKKKEGKLLADYDSFWLSLGGEKQDSGNFMLPLVMPRKPMEEIASKKRSEYRRRYELLDSLIQQVNQATRG
>NZ_CP015227.1|WP_014883196.1|2383466_2384582_+|macrolide-transporter-subunit-MacA
MNLKGKRRTLFLLLAVVILVGGFWLWQVLNAPVPQYRTLIVRPGELQQNVLATGKLDALRKVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAENQIREVEATLMELRAQRAQALAERNLAQVTLTRQQALAKTQAISKQDLDTATTELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTQIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQNAWFTVLGDPQTRYEGVLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQLTGVKNVLTIPLSALGESAGDNRYKVKVLRNGETRDREVVIGARNDTDVVVVKGLEEGEEVVVSESLPGAAK
>NZ_CP015227.1|WP_023332529.1|2384578_2386519_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELKDIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLNAAQNVEVPAVYAGVERKKRLERAKTLLTRLGLAERVEYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIHDGELVSNPPPRASRAAAPKEALPASTGWGQFSSGFREALNMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRVGNVDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKASVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSALAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLFLPGWEIGFSPVAIITAFLCSTFTGILFGWLPARNAARLDPVDALARE
>NZ_CP015227.1|WP_008499993.1|2386589_2386811_-|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASLIVPIEAETVA
>NZ_CP015227.1|WP_006174393.1|2387078_2387399_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP015227_1	1.9\|2375604\|32\|NZ_CP015227\|CRT	2375604-2375635	32	NZ_CP015227.1	3907204-3907235	2	0.938

1. spacer 1.9|2375604|32|NZ_CP015227|CRT matches to position: 3907204-3907235, mismatch: 2, identity: 0.938

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcttcaccttgtcacagatgc	Protospacer
*************.*.****************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015227_1	1.9\|2375604\|32\|NZ_CP015227\|CRT	2375604-2375635	32	NC_016158	Escherichia phage HK639, complete genome	42334-42365	1	0.969
NZ_CP015227_1	1.9\|2375604\|32\|NZ_CP015227\|CRT	2375604-2375635	32	NC_019717	Enterobacteria phage HK225, complete genome	39893-39924	1	0.969
NZ_CP015227_1	1.9\|2375604\|32\|NZ_CP015227\|CRT	2375604-2375635	32	MN856003	Bacteriophage sp. isolate 1, complete genome	29088-29119	2	0.938
NZ_CP015227_1	1.18\|2375604\|35\|NZ_CP015227\|CRISPRCasFinder	2375604-2375638	35	NC_016158	Escherichia phage HK639, complete genome	42334-42368	4	0.886
NZ_CP015227_1	1.18\|2375604\|35\|NZ_CP015227\|CRISPRCasFinder	2375604-2375638	35	NC_019717	Enterobacteria phage HK225, complete genome	39893-39927	4	0.886
NZ_CP015227_1	1.18\|2375604\|35\|NZ_CP015227\|CRISPRCasFinder	2375604-2375638	35	MN856003	Bacteriophage sp. isolate 1, complete genome	29085-29119	5	0.857
NZ_CP015227_1	1.8\|2375544\|32\|NZ_CP015227\|CRT	2375544-2375575	32	MG969411	UNVERIFIED: Salmonella phage GE_vB_MG, complete genome	80085-80116	6	0.812
NZ_CP015227_1	1.7\|2375484\|32\|NZ_CP015227\|CRT	2375484-2375515	32	NZ_CP014800	Salipiger profundus strain JLT2016 plasmid pTPRO4, complete sequence	13287-13318	11	0.656

1. spacer 1.9|2375604|32|NZ_CP015227|CRT matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 1, identity: 0.969

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgc	Protospacer
***************.****************

2. spacer 1.9|2375604|32|NZ_CP015227|CRT matches to NC_019717 (Enterobacteria phage HK225, complete genome) position: , mismatch: 1, identity: 0.969

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgc	Protospacer
***************.****************

3. spacer 1.9|2375604|32|NZ_CP015227|CRT matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 2, identity: 0.938

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttttcacagatgc	Protospacer
***************.***** **********

4. spacer 1.18|2375604|35|NZ_CP015227|CRISPRCasFinder matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 4, identity: 0.886

acaatctgaactccttaccttgtcacagatgcgct	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgcaga	Protospacer
***************.****************.

5. spacer 1.18|2375604|35|NZ_CP015227|CRISPRCasFinder matches to NC_019717 (Enterobacteria phage HK225, complete genome) position: , mismatch: 4, identity: 0.886

acaatctgaactccttaccttgtcacagatgcgct	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgcaga	Protospacer
***************.****************.

6. spacer 1.18|2375604|35|NZ_CP015227|CRISPRCasFinder matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 5, identity: 0.857

acaatctgaactccttaccttgtcacagatgcgct	CRISPR spacer
acaatctgaactcctcaccttttcacagatgcaga	Protospacer
***************.***** **********.

7. spacer 1.8|2375544|32|NZ_CP015227|CRT matches to MG969411 (UNVERIFIED: Salmonella phage GE_vB_MG, complete genome) position: , mismatch: 6, identity: 0.812

agtccgacactgtgtttccgtctgttcagtac-	CRISPR spacer
agtccgacattgtgtttcagtct-tcaagttcc	Protospacer
*********.******** **** *. *** *

8. spacer 1.7|2375484|32|NZ_CP015227|CRT matches to NZ_CP014800 (Salipiger profundus strain JLT2016 plasmid pTPRO4, complete sequence) position: , mismatch: 11, identity: 0.656

gaaaacctcctgcacggaggcgcgaaaacaga	CRISPR spacer
ccgcgcctacggcacggaggcgcgaaaaattc	Protospacer
  . .*** * *****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

378945 : 388711

Enterobacteria_phage(87.5%)

integrase

attL 378873:378893|attR 388939:388959

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
378873:378893	attL	NA	NA	NA	NA
WP_023196286.1\|378945_380139_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	8.2e-108	50.4
WP_021000667.1\|380168_380606_-	hypothetical protein	NA	NA	NA	NA
WP_023196287.1\|380773_381667_-	DUF4747 family protein	NA	NA	NA	NA
WP_063308454.1\|382073_382640_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.5e-62	67.0
WP_047352759.1\|382658_382886_-	transcriptional regulator	NA	NA	NA	NA
WP_063308455.1\|382882_383617_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	3.1e-73	60.2
WP_063308456.1\|384167_384434_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.0e-22	62.5
WP_063308457.1\|384430_384985_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.4e-33	70.4
WP_063308458.1\|384977_385271_+	hypothetical protein	Q7M2A0	Enterobacteria_phage	3.9e-19	53.7
WP_063308459.1\|385263_385713_+	hypothetical protein	Q7M298	Enterobacteria_phage	2.6e-43	66.1
WP_063308460.1\|385785_386046_+	hypothetical protein	NA	NA	NA	NA
WP_063308461.1\|386042_386363_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_063308462.1\|386377_388711_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.3
388939:388959	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2433145 : 2533235

103

Enterobacteria_phage(40.38%)

protease,tail,integrase,head,terminase,capsid,tRNA,portal,lysis

attL 2429774:2429791|attR 2471950:2471967

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2429774:2429791	attL	NA	NA	NA	NA
WP_014883226.1\|2433145_2433925_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_014883227.1\|2433928_2435251_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_045282263.1\|2435231_2435936_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_063308520.1\|2435935_2440387_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_014883229.1\|2440565_2442389_+	L,D-transpeptidase	NA	NA	NA	NA
WP_078310576.1\|2442555_2443116_+	YcbK family protein	NA	NA	NA	NA
WP_045134657.1\|2443136_2443784_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_014883232.1\|2443836_2445027_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_072093609.1\|2445211_2446315_-	porin	Q1MVN1	Enterobacteria_phage	1.4e-98	52.5
WP_014883234.1\|2446925_2448326_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	1.4e-79	35.9
WP_045281289.1\|2448490_2449693_-	nicotinate phosphoribosyltransferase	A0A2L0UZQ6	Agrobacterium_phage	2.9e-44	31.4
WP_063308521.1\|2449877_2451170_-\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	1.6e-237	94.2
WP_013097283.1\|2451214_2451472_-	excisionase family protein	S4TND0	Salmonella_phage	1.8e-36	90.0
WP_052954565.1\|2451455_2451842_-	hypothetical protein	NA	NA	NA	NA
WP_047345117.1\|2451829_2452573_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	2.1e-130	93.5
WP_042889584.1\|2452618_2453446_-\|protease	serine protease	Q8W654	Enterobacteria_phage	2.2e-112	85.1
WP_045326846.1\|2453442_2453637_-	hypothetical protein	NA	NA	NA	NA
WP_058684728.1\|2453636_2454044_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	1.9e-24	48.6
WP_063308522.1\|2454233_2454641_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	1.2e-47	88.4
WP_063308523.1\|2454633_2454864_-	hypothetical protein	NA	NA	NA	NA
WP_063308524.1\|2454970_2455360_-	S24 family peptidase	F1C5A0	Cronobacter_phage	5.8e-31	58.8
WP_063308525.1\|2455426_2455858_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_063308526.1\|2456058_2456691_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	2.3e-32	38.5
WP_071890822.1\|2456801_2457017_+	helix-turn-helix transcriptional regulator	K7P850	Enterobacteria_phage	6.5e-08	45.3
WP_063308527.1\|2457013_2457925_+	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	3.7e-92	63.6
WP_063308528.1\|2457940_2458822_+	AAA family ATPase	Q8W641	Enterobacteria_phage	5.1e-83	63.7
WP_063308529.1\|2458818_2460198_+	AAA family ATPase	Q8W640	Enterobacteria_phage	3.4e-174	67.9
WP_047363380.1\|2460225_2461041_+	antitermination protein	A0A1B5FPA5	Escherichia_phage	1.6e-115	77.1
WP_045343415.1\|2461522_2462065_+	HNH endonuclease	D6PIK0	uncultured_phage	5.7e-24	41.2
WP_023622516.1\|2462167_2462392_+\|lysis	lysis S family protein	M9NZI9	Enterobacteria_phage	2.1e-33	95.9
WP_044901837.1\|2462369_2462864_+	lysozyme	M9P0E5	Enterobacteria_phage	5.4e-90	97.6
WP_063308530.1\|2462860_2463238_+	DUF2570 domain-containing protein	M9NYX9	Enterobacteria_phage	5.7e-15	63.4
WP_071890824.1\|2463218_2463395_+	rz1 lytic protein	U5P461	Shigella_phage	1.7e-09	56.6
WP_080964258.1\|2463737_2464040_+	hypothetical protein	NA	NA	NA	NA
WP_078310420.1\|2464580_2465228_+	DUF1983 domain-containing protein	G8C7Q4	Escherichia_phage	4.1e-61	74.8
WP_045133824.1\|2465238_2465466_+	hypothetical protein	NA	NA	NA	NA
WP_063308531.1\|2465483_2466941_+	hypothetical protein	K7PKP3	Enterobacterial_phage	1.1e-268	90.1
WP_057992063.1\|2467074_2467326_-	hypothetical protein	NA	NA	NA	NA
WP_063308770.1\|2467489_2468080_+	hypothetical protein	S4TR53	Salmonella_phage	8.2e-93	81.5
WP_071890829.1\|2468079_2468436_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	8.2e-48	77.2
WP_045332660.1\|2469256_2469730_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	1.3e-85	98.7
WP_016063095.1\|2469729_2471466_+\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	0.0e+00	100.0
WP_063308532.1\|2471465_2472770_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	1.2e-232	93.1
2471950:2471967	attR	NA	NA	NA	NA
WP_047717738.1\|2472783_2473632_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	2.4e-138	92.1
WP_063308533.1\|2473641_2474853_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	4.7e-196	88.3
WP_063308534.1\|2474893_2475190_+	hypothetical protein	K7PHI6	Enterobacteria_phage	5.8e-15	83.0
WP_059362068.1\|2475189_2475516_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.2e-53	92.6
WP_032665834.1\|2475512_2475857_+\|head	phage head closure protein	Q7Y406	Yersinia_phage	1.1e-25	57.3
WP_032665836.1\|2475837_2476221_+	hypothetical protein	Q6UAX2	Klebsiella_phage	2.8e-41	57.5
WP_032665838.1\|2476223_2476628_+	hypothetical protein	Q6UAX1	Klebsiella_phage	9.7e-45	72.7
WP_032104401.1\|2476660_2477113_+\|tail	major tail shaft subunit	Q7Y403	Yersinia_phage	9.1e-60	76.7
WP_032665840.1\|2477176_2477539_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.1e-26	55.2
WP_032665842.1\|2477777_2481107_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	66.5
WP_032610603.1\|2481109_2481448_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	9.2e-49	77.7
WP_032610602.1\|2481444_2482200_+\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	1.0e-135	92.4
WP_032610600.1\|2482201_2482912_+	peptidase P60	K7PJV6	Enterobacteria_phage	1.5e-141	96.2
WP_032610599.1\|2482940_2483288_+	hypothetical protein	NA	NA	NA	NA
WP_032610598.1\|2483314_2483905_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	3.8e-90	85.2
WP_063308535.1\|2483959_2487793_+\|tail	phage tail protein	Q9MCR7	Enterobacteria_phage	0.0e+00	83.6
WP_063308536.1\|2487794_2488760_+	hypothetical protein	G1CSU0	Cronobacter_virus	1.1e-57	39.1
WP_156491237.1\|2489585_2489948_+	hypothetical protein	A0A2I6PD03	Escherichia_phage	5.3e-26	57.0
WP_023296458.1\|2490079_2490346_-	DinI family protein	K7PKM2	Enterobacterial_phage	4.7e-40	95.5
WP_045281288.1\|2490770_2493383_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	9.1e-19	22.2
WP_014883237.1\|2493485_2494256_-	aliphatic sulfonates ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.4e-29	37.6
WP_014883238.1\|2494252_2495044_-	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA
WP_032637061.1\|2495053_2496199_-	FMNH2-dependent alkanesulfonate monooxygenase	NA	NA	NA	NA
WP_014883240.1\|2496195_2497158_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_045281287.1\|2497150_2497726_-	NADPH-dependent FMN reductase	NA	NA	NA	NA
WP_014883242.1\|2497975_2498986_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_014883243.1\|2499151_2499694_+	cell division protein ZapC	NA	NA	NA	NA
WP_045281286.1\|2499690_2500800_-	MOSC domain-containing protein	V5UTY8	Synechococcus_phage	4.1e-05	39.1
WP_063308537.1\|2500898_2503007_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_014883246.1\|2503019_2504927_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	6.2e-49	28.1
WP_014883247.1\|2504940_2506194_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_014883248.1\|2506198_2507839_+	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_014883249.1\|2507835_2508402_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_013097261.1\|2508658_2508826_+	ribosome modulation factor	NA	NA	NA	NA
WP_000227926.1\|2508897_2509416_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_014883250.1\|2509484_2511245_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_023332611.1\|2511431_2511884_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_014883252.1\|2511948_2513004_-	porin OmpA	NA	NA	NA	NA
WP_014883253.1\|2513359_2513869_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_032637053.1\|2514086_2514713_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_023332614.1\|2514669_2516832_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_014883256.1\|2516851_2517298_-	YccF domain-containing protein	NA	NA	NA	NA
WP_045281285.1\|2517421_2519476_+	DNA helicase IV	A7KV33	Bacillus_phage	7.9e-18	27.6
WP_008499922.1\|2519534_2519993_-	methylglyoxal synthase	NA	NA	NA	NA
WP_023332617.1\|2520073_2520736_-	DUF2057 family protein	NA	NA	NA	NA
WP_014883259.1\|2520909_2521323_+	CoA-binding protein	NA	NA	NA	NA
WP_008499919.1\|2521359_2521677_-	heat shock protein HspQ	NA	NA	NA	NA
WP_045134648.1\|2521737_2522928_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_032637048.1\|2523102_2523660_+	kinase inhibitor	NA	NA	NA	NA
WP_045134647.1\|2523670_2524459_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045281283.1\|2524470_2524752_+	acylphosphatase	NA	NA	NA	NA
WP_008499913.1\|2524748_2525078_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_023332622.1\|2525147_2525699_-	response regulator transcription factor	NA	NA	NA	NA
WP_127312439.1\|2525709_2526864_-\|tail	phage tail protein	NA	NA	NA	NA
WP_045281281.1\|2526868_2529586_-	fimbrial protein	NA	NA	NA	NA
WP_023332625.1\|2529658_2530165_-	hypothetical protein	NA	NA	NA	NA
WP_127312440.1\|2530240_2530960_-	fimbrial protein	NA	NA	NA	NA
WP_032637043.1\|2531292_2532048_+	transcriptional regulator	NA	NA	NA	NA
WP_032637041.1\|2532044_2532521_+	hypothetical protein	NA	NA	NA	NA
WP_013097244.1\|2532575_2533235_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	8.9e-48	54.9

DBSCAN-SWA_3

2553089 : 2615895

Enterobacteria_phage(28.57%)

protease,plate,coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063308553.1\|2553089_2554784_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_156491214.1\|2554894_2557825_+	hypothetical protein	NA	NA	NA	NA
WP_063308555.1\|2558223_2559861_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	5.5e-38	26.1
WP_063308556.1\|2560901_2562392_+	hypothetical protein	NA	NA	NA	NA
WP_082826296.1\|2563206_2563476_-	DUF2165 family protein	NA	NA	NA	NA
WP_082826297.1\|2563349_2563709_-	DUF2165 family protein	NA	NA	NA	NA
WP_071890842.1\|2563912_2564578_+	DUF2913 family protein	NA	NA	NA	NA
WP_063308558.1\|2565089_2565377_+	hypothetical protein	NA	NA	NA	NA
WP_156491215.1\|2566396_2567500_+	hypothetical protein	NA	NA	NA	NA
WP_063308561.1\|2570611_2571121_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_082826298.1\|2571117_2572608_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_156491216.1\|2572677_2573226_+	hypothetical protein	NA	NA	NA	NA
WP_156491217.1\|2573421_2573853_+	hypothetical protein	NA	NA	NA	NA
WP_082826299.1\|2574080_2575934_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_063308564.1\|2575924_2576863_+	hypothetical protein	NA	NA	NA	NA
WP_063308565.1\|2576864_2578763_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.6e-12	21.9
WP_063308566.1\|2578806_2580099_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_063308567.1\|2580399_2581146_+	hypothetical protein	NA	NA	NA	NA
WP_082826300.1\|2581129_2582548_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_063308569.1\|2582548_2582962_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_063308570.1\|2583453_2584380_+	hypothetical protein	NA	NA	NA	NA
WP_156491218.1\|2584319_2586689_+	hypothetical protein	NA	NA	NA	NA
WP_082826301.1\|2589296_2589623_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_156491219.1\|2589838_2590540_+	hypothetical protein	NA	NA	NA	NA
WP_156491220.1\|2590569_2591058_+	hypothetical protein	NA	NA	NA	NA
WP_156491221.1\|2591561_2591843_+	hypothetical protein	NA	NA	NA	NA
WP_156491222.1\|2597862_2598006_+	hypothetical protein	NA	NA	NA	NA
WP_071890903.1\|2599173_2600091_+	hypothetical protein	NA	NA	NA	NA
WP_063308574.1\|2600135_2600642_-	hypothetical protein	NA	NA	NA	NA
WP_063308575.1\|2601102_2601396_-	hypothetical protein	NA	NA	NA	NA
WP_063308576.1\|2601541_2602051_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	1.4e-08	35.1
WP_063308578.1\|2602861_2603977_-	porin OmpC	Q1MVN1	Enterobacteria_phage	3.2e-114	60.1
WP_156491223.1\|2604598_2605078_-	hypothetical protein	NA	NA	NA	NA
WP_063308582.1\|2608231_2608645_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.2e-29	72.6
WP_063308583.1\|2608641_2608992_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.1e-40	66.4
WP_082826302.1\|2610747_2610939_-\|transposase	transposase	U5P4I9	Shigella_phage	1.5e-16	68.9
WP_063308586.1\|2611299_2611821_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_063308587.1\|2611834_2612560_+	molecular chaperone	NA	NA	NA	NA
WP_082826303.1\|2612531_2614895_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_063308588.1\|2614926_2615895_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_4

3538958 : 3600616

Erwinia_phage(22.5%)

protease,tail,integrase,plate,head,holin,terminase,capsid,portal,lysis

attL 3566601:3566617|attR 3600699:3600715

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045281237.1\|3538958_3540005_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	2.1e-19	29.2
WP_014884093.1\|3540256_3541018_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.8e-07	23.0
WP_023337380.1\|3541014_3541605_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_014884095.1\|3541640_3542519_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_003856793.1\|3542615_3543236_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_045281236.1\|3543232_3544114_-	5'-3' exoribonuclease	NA	NA	NA	NA
WP_106993556.1\|3544253_3544298_+	trp operon leader peptide	NA	NA	NA	NA
WP_045281235.1\|3544394_3545957_+	anthranilate synthase component 1	NA	NA	NA	NA
WP_014884098.1\|3545956_3547552_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	7.2e-51	37.3
WP_014884099.1\|3547555_3548914_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.3e-36	40.6
WP_014884100.1\|3548924_3550118_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_045281234.1\|3550117_3550927_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_023330557.1\|3551193_3552450_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_014884103.1\|3552604_3552817_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	8.4e-24	80.6
WP_032629007.1\|3553309_3553915_+	hypothetical protein	NA	NA	NA	NA
WP_014884106.1\|3553978_3554638_-	DsbA family protein	NA	NA	NA	NA
WP_014884107.1\|3554767_3555247_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_014884108.1\|3555387_3556209_+	alpha/beta hydrolase	A0A1D8EW21	Mycobacterium_phage	3.7e-11	25.3
WP_045281233.1\|3556285_3557053_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_045281232.1\|3557309_3558329_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_045281231.1\|3558428_3559208_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_045281230.1\|3559445_3559994_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_045281229.1\|3560171_3561383_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_014884113.1\|3561379_3561613_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_155404566.1\|3561807_3561978_-	hypothetical protein	NA	NA	NA	NA
WP_014884115.1\|3562124_3562757_-	outer membrane protein OmpW	NA	NA	NA	NA
WP_049010621.1\|3563038_3563443_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_014884117.1\|3563468_3564212_+	UPF0259 family protein	NA	NA	NA	NA
WP_014884118.1\|3564269_3564809_+	septation protein A	NA	NA	NA	NA
WP_008502796.1\|3564913_3565309_+	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA
WP_014884119.1\|3565345_3566074_-	TonB system transport protein TonB	NA	NA	NA	NA
WP_045281228.1\|3566296_3566593_+	YciI family protein	NA	NA	NA	NA
3566601:3566617	attL	NA	NA	NA	NA
WP_063308664.1\|3566739_3567216_-	hypothetical protein	NA	NA	NA	NA
WP_063308665.1\|3567417_3568194_-	hypothetical protein	NA	NA	NA	NA
WP_071890866.1\|3568302_3568524_-	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	2.7e-25	71.2
WP_063308666.1\|3568600_3569770_-	phage late control D family protein	Q6K1G4	Salmonella_virus	2.7e-172	79.3
WP_059372334.1\|3569766_3570231_-\|tail	phage tail protein	A0A218M4I2	Erwinia_phage	6.1e-59	69.4
WP_063308667.1\|3570243_3572691_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	2.5e-289	73.1
WP_063308668.1\|3572680_3572803_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.0e-13	89.7
WP_045269020.1\|3572835_3573144_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.4e-27	72.4
WP_063308669.1\|3573204_3573723_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	6.5e-78	80.2
WP_063308670.1\|3573735_3574929_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	6.8e-187	81.6
WP_023333113.1\|3575051_3575456_-\|tail	tail fiber assembly protein	U5P083	Shigella_phage	1.7e-25	45.5
WP_063308671.1\|3575467_3577498_-\|tail	phage tail protein	U5N099	Enterobacteria_phage	5.3e-91	80.5
WP_063308672.1\|3577509_3578040_-\|tail	phage tail protein I	Q37841	Escherichia_phage	6.9e-91	86.4
WP_063308673.1\|3578032_3578941_-\|plate	baseplate assembly protein	Q6K1H4	Salmonella_virus	1.4e-136	83.4
WP_023338715.1\|3578946_3579297_-	hypothetical protein	A0A0M4RE59	Salmonella_phage	1.5e-38	69.8
WP_063308674.1\|3579293_3579935_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	5.0e-96	82.2
WP_063308675.1\|3582944_3583391_-	phage virion morphogenesis protein	O80313	Escherichia_phage	3.8e-42	63.9
WP_063308676.1\|3583383_3583851_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	1.3e-61	72.3
WP_072163335.1\|3583813_3584059_-\|holin	holin	S4TNY4	Salmonella_phage	1.0e-28	77.8
WP_063145448.1\|3583946_3584372_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	1.6e-45	70.1
WP_063308677.1\|3584368_3584878_-	lysozyme	A0A218M4K3	Erwinia_phage	7.1e-77	85.1
WP_063308678.1\|3584861_3585083_-	hypothetical protein	A0A218M4L5	Erwinia_phage	1.6e-25	72.6
WP_063308679.1\|3585073_3585277_-\|tail	phage tail protein	A0A218M4L8	Erwinia_phage	1.6e-24	77.6
WP_047361211.1\|3585276_3585783_-\|head	head completion/stabilization protein	O80306	Escherichia_phage	1.4e-61	70.8
WP_063308680.1\|3585882_3586638_-\|terminase	terminase endonuclease subunit	Q6K1I5	Salmonella_virus	2.4e-73	64.9
WP_063308681.1\|3586641_3587709_-\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	4.3e-169	83.1
WP_063308682.1\|3587764_3588619_-\|capsid	GPO family capsid scaffolding protein	A0A218M4L9	Erwinia_phage	5.3e-117	74.6
WP_063308683.1\|3588785_3590555_+\|terminase	terminase ATPase subunit family protein	A0A218M4M1	Erwinia_phage	3.9e-300	84.7
WP_063308684.1\|3590556_3591582_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	1.2e-168	83.5
WP_048987999.1\|3591896_3592958_-	serine/threonine protein kinase	A0A2H4UVE2	Bodo_saltans_virus	1.2e-17	25.4
WP_063308685.1\|3592954_3594019_-	serine/threonine protein kinase	G9BWE0	Planktothrix_phage	1.4e-55	47.4
WP_156491234.1\|3594008_3595175_-	hypothetical protein	NA	NA	NA	NA
WP_014884151.1\|3597564_3597828_-	hypothetical protein	U5N3W1	Enterobacteria_phage	2.0e-22	57.0
WP_063308687.1\|3597850_3598069_-	DUF2732 family protein	Q7Y4C2	Escherichia_virus	4.9e-11	64.8
WP_032658818.1\|3598801_3599077_-	hypothetical protein	Q1JS60	Enterobacteria_phage	1.5e-41	84.4
WP_032658822.1\|3599212_3599509_+	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	9.6e-34	70.1
WP_047361185.1\|3599605_3600616_+\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	4.7e-149	76.4
3600699:3600715	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3875586 : 3924390

Enterobacteria_phage(32.79%)

tail,integrase,head,holin,terminase,lysis

attL 3906364:3906378|attR 3927932:3927946

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063308699.1\|3875586_3876852_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	2.6e-205	83.2
WP_080335852.1\|3876853_3877162_-	hypothetical protein	I6PCW5	Cronobacter_phage	3.1e-11	51.4
WP_063308700.1\|3877274_3877637_+	GtrA family protein	B9UDL8	Salmonella_phage	7.3e-44	74.2
WP_045135348.1\|3877633_3878551_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	8.3e-161	92.1
WP_131619240.1\|3878600_3880187_+	hypothetical protein	B9UDL6	Salmonella_phage	1.5e-48	33.3
WP_063308701.1\|3880405_3882622_-	hypothetical protein	F1C5A8	Cronobacter_phage	7.4e-38	60.6
WP_063308702.1\|3882679_3885157_-	hypothetical protein	F1C5A7	Cronobacter_phage	0.0e+00	92.6
WP_063308703.1\|3885143_3885509_-	C40 family peptidase	F1C5F2	Cronobacter_phage	5.1e-61	87.4
WP_063308704.1\|3885522_3885993_-	hypothetical protein	F1C5F1	Cronobacter_phage	1.6e-78	92.9
WP_063308705.1\|3885992_3886490_-	hypothetical protein	F1C5F0	Cronobacter_phage	1.6e-89	92.1
WP_045135341.1\|3886531_3886759_-	hypothetical protein	NA	NA	NA	NA
WP_063308706.1\|3886769_3889568_-\|tail	tail protein (tape measure)	B1GS57	Salmonella_phage	3.8e-180	52.9
WP_063308707.1\|3889580_3890252_-	hypothetical protein	G0ZNE7	Cronobacter_phage	1.0e-54	50.2
WP_063308708.1\|3890309_3891053_-	DNA breaking-rejoining protein	F1C5E5	Cronobacter_phage	2.6e-72	84.6
WP_063308709.1\|3891116_3891500_-	hypothetical protein	F1C5E4	Cronobacter_phage	5.7e-39	62.2
WP_063308710.1\|3891496_3891961_-	hypothetical protein	A0A1V0E5P5	Salmonella_phage	7.7e-30	50.3
WP_016245422.1\|3891963_3892320_-	hypothetical protein	G0ZNE2	Cronobacter_phage	7.2e-28	57.3
WP_057060243.1\|3892319_3892493_-	hypothetical protein	Q5G8X7	Enterobacteria_phage	1.6e-12	50.9
WP_014883998.1\|3892492_3892873_-	hypothetical protein	F1C5E2	Cronobacter_phage	3.1e-29	54.5
WP_014883999.1\|3892875_3893241_-	hypothetical protein	NA	NA	NA	NA
WP_014884000.1\|3893250_3894348_-	hypothetical protein	F1C5E1	Cronobacter_phage	7.6e-161	77.7
WP_014884001.1\|3894357_3894792_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.1e-51	73.6
WP_014884002.1\|3894795_3896184_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.0e-149	58.3
WP_063308711.1\|3896253_3896733_-	hypothetical protein	NA	NA	NA	NA
WP_063308712.1\|3896778_3897780_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	5.4e-113	68.0
WP_063308713.1\|3897706_3899176_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	9.9e-148	56.8
WP_063308714.1\|3899188_3900487_-\|terminase	terminase	Q5G8Y7	Enterobacteria_phage	3.1e-246	96.5
WP_063308715.1\|3900470_3900938_-	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	2.1e-51	67.8
WP_063308716.1\|3900969_3901608_-	hypothetical protein	I6S676	Salmonella_phage	1.0e-112	91.5
WP_063308717.1\|3901611_3901818_-	hypothetical protein	NA	NA	NA	NA
WP_023150211.1\|3901928_3902378_-	hypothetical protein	NA	NA	NA	NA
WP_032665710.1\|3902842_3903361_-	Rha family transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	7.9e-92	98.3
WP_156491238.1\|3903551_3903983_-\|lysis	lysis protein	M9NYX9	Enterobacteria_phage	4.6e-45	67.1
WP_063308719.1\|3904018_3904459_-	lysozyme	A0A0M4R365	Salmonella_phage	5.2e-60	78.5
WP_122008274.1\|3904445_3904751_-\|holin	holin	E7C9S8	Salmonella_phage	1.1e-43	86.1
WP_063308720.1\|3905273_3905771_-	antiterminator	G8C7V7	Escherichia_phage	5.3e-93	98.2
WP_156491235.1\|3905770_3905887_-	hypothetical protein	NA	NA	NA	NA
WP_063308721.1\|3905883_3906246_-	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	7.3e-52	82.4
WP_063308722.1\|3906242_3906533_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	5.3e-45	89.6
3906364:3906378	attL	NA	NA	NA	NA
WP_063308723.1\|3906525_3906696_-	NinE family protein	K7P7K0	Enterobacteria_phage	1.5e-20	94.3
WP_063308724.1\|3906695_3907151_-	hypothetical protein	K7P7B8	Enterobacteria_phage	5.8e-54	68.2
WP_141192643.1\|3907397_3907640_-	hypothetical protein	NA	NA	NA	NA
WP_063308726.1\|3907636_3908215_-	DUF551 domain-containing protein	G8C7V0	Escherichia_phage	1.1e-70	83.6
WP_063308727.1\|3908211_3908409_-	hypothetical protein	K7PKS4	Enterobacteria_phage	2.2e-26	96.9
WP_047345151.1\|3908405_3908750_-	winged helix-turn-helix transcriptional regulator	K7PHG5	Enterobacteria_phage	4.6e-56	95.6
WP_063308728.1\|3908921_3909794_-	AAA family ATPase	K7PLU3	Enterobacteria_phage	1.5e-95	69.1
WP_063308729.1\|3909778_3910648_-	replication protein	K7PGT1	Enterobacteria_phage	2.3e-67	50.8
WP_063308730.1\|3910733_3911279_-	hypothetical protein	K7P7P2	Enterobacteria_phage	1.1e-94	97.8
WP_025913385.1\|3911308_3911536_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	2.0e-23	70.4
WP_047345900.1\|3911647_3912352_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.7e-103	79.1
WP_063308731.1\|3912388_3912874_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_063308732.1\|3913537_3914206_+	hypothetical protein	NA	NA	NA	NA
WP_063308733.1\|3914367_3914619_+	hypothetical protein	Q9MC84	Pseudomonas_phage	2.5e-06	41.8
WP_001752704.1\|3914770_3914977_+	cell division protein FtsZ	G8C7T2	Escherichia_phage	3.6e-32	100.0
WP_063308735.1\|3915053_3916025_+	hypothetical protein	M9P0E1	Enterobacteria_phage	7.4e-83	95.3
WP_022651075.1\|3916032_3916317_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.0e-48	96.8
WP_032647505.1\|3916335_3917082_+	phage recombination protein Bet	A0A0M4RD39	Salmonella_phage	1.8e-65	65.8
WP_032647504.1\|3917078_3917696_+	YqaJ viral recombinase family protein	A0A0S2SY31	Pseudomonas_phage	3.6e-59	57.3
WP_063308736.1\|3917692_3918121_+	hypothetical protein	M9NYX4	Enterobacteria_phage	1.7e-71	94.4
WP_063308737.1\|3918117_3918270_+	DUF1317 family protein	T1SAR0	Salmonella_phage	9.6e-06	44.2
WP_047028423.1\|3918266_3918749_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	2.7e-70	78.6
WP_063308738.1\|3918745_3919405_+	DNA methyltransferase	G8C7S6	Escherichia_phage	6.1e-121	92.7
WP_063308739.1\|3919401_3919608_+	hypothetical protein	NA	NA	NA	NA
WP_063308740.1\|3919604_3920216_+	hypothetical protein	NA	NA	NA	NA
WP_022650956.1\|3920212_3920404_+	DUF1382 family protein	A0A0P0ZC60	Stx2-converting_phage	4.1e-14	66.1
WP_063308741.1\|3920400_3920721_+	hypothetical protein	NA	NA	NA	NA
WP_063308742.1\|3920812_3921238_+	hypothetical protein	NA	NA	NA	NA
WP_063308743.1\|3921239_3921458_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	2.1e-17	63.9
WP_065422745.1\|3921457_3921850_+	DUF2591 domain-containing protein	A0A088CQ65	Enterobacteria_phage	4.4e-10	34.1
WP_063308744.1\|3921827_3922067_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	3.7e-28	73.1
WP_063308745.1\|3922076_3922403_+	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	5.6e-43	80.0
WP_063308746.1\|3922594_3922795_+	hypothetical protein	G8C7S1	Escherichia_phage	2.1e-32	98.5
WP_063308747.1\|3922803_3923049_+	excisionase family protein	Q8W657	Enterobacteria_phage	1.2e-26	66.7
WP_063308748.1\|3923094_3924390_+\|integrase	site-specific integrase	Q20GI2	Phage_258-320	1.5e-179	68.2
3927932:3927946	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4015548 : 4022976

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045281012.1\|4015548_4016553_+	NAD-dependent epimerase	A0A2K9L4U8	Tupanvirus	1.0e-34	30.7
WP_045134937.1\|4016604_4017771_-	UDP-glucose 6-dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	3.5e-111	53.0
WP_014884476.1\|4018025_4019432_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.0e-37	28.3
WP_023330866.1\|4019567_4020116_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.1e-54	55.0
WP_063308755.1\|4020126_4021023_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_014884479.1\|4021029_4021896_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	4.1e-109	66.7
WP_014884480.1\|4021911_4022976_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.1e-100	53.8

Anti-CRISPR protein detection

Acr_ID: NZ_CP015227.1|WP_063308747.1|3922803_3923049_+|excisionase-family-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP015227.1|WP_063308747.1|3922803_3923049_+|excisionase-family-protein

3922803_3923049_+

81 aa aa

3875586-3924390

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP015227_1	Orphan	1.9\|2375604\|32\|NZ_CP015227\|CRT	2375604-2375635	32	3907235-3907204	2

1. spacer 1.9|2375604|32|NZ_CP015227|CRT matches to NZ_CP015227 position: 3907235-3907204, mismatch: 2

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcttcaccttgtcacagatgc	Protospacer
*************.*.****************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015227

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information