CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014982	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 chromosome, complete genome	5 crisprs	cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas14j,DEDDh,DinG	0	37	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014982_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014982_1

638317-638417

Orphan

Consensus_repeat	Method
GCTTCAGTGGCGAACGTCGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014982_1

>merge|NZ_CP014982|1|638317-638417|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAAGGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTCGCTTCAGCGGCGAACGTCGTGAA

>NZ_CP014982|1|1|638317-638417|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAA	GGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTC
GCTTCAGCGGCGAACGTCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014982.2\|WP_063328693.1\|628373_631052_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP014982.2\|WP_000421309.1\|643393_644389_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP014982.2\|WP_001294027.1\|639935_640466_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014982.2\|WP_000130437.1\|641321_642329_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP014982.2\|WP_001040199.1\|631272_631674_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP014982.2\|WP_000059465.1\|632768_633038_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP014982.2\|WP_010723222.1\|636514_636595_+\|protein-YrbN	unknown	unknown	gnl\|CDD\|380282
NZ_CP014982.2\|WP_001670767.1\|633279_635415_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP014982.2\|WP_000089674.1\|631673_632618_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP014982.2\|WP_000884721.1\|644605_645130_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP014982.2\|WP_000207654.1\|624395_625739_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP014982.2\|WP_000908562.1\|645123_645627_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP014982.2\|WP_000802069.1\|635524_636409_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP014982.2\|WP_000928379.1\|645613_645931_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP014982.2\|WP_000380404.1\|645968_646412_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP014982.2\|WP_000105461.1\|626366_626819_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP014982.2\|WP_000532745.1\|640624_641344_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP014982.2\|WP_000224386.1\|638630_639875_+\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492
NZ_CP014982.2\|WP_001031038.1\|626846_628349_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP014982.2\|WP_014343907.1\|642506_643403_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968

Protein	Function_ID	Function_description	E-value
NZ_CP014982.2\|WP_063328693.1\|628373_631052_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP014982.2\|WP_000421309.1\|643393_644389_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	3.77757e-116
NZ_CP014982.2\|WP_000130437.1\|641321_642329_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP014982.2\|WP_001040199.1\|631272_631674_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	9.9646e-53
NZ_CP014982.2\|WP_000059465.1\|632768_633038_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	7.70279e-54
NZ_CP014982.2\|WP_010723222.1\|636514_636595_+\|protein-YrbN	gnl\|CDD\|380282	NF033440, small_YrbN, protein YrbN. YrbN, a small protein of only 26 amino acids, is found in at least these genera: Escherichia, Salmonella, Enterobacter, Klebsiella, and Yersinia. It is known to be expressed in E. coli.	1.66225e-08
NZ_CP014982.2\|WP_001670767.1\|633279_635415_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP014982.2\|WP_000089674.1\|631673_632618_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP014982.2\|WP_000884721.1\|644605_645130_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	1.82299e-84
NZ_CP014982.2\|WP_000207654.1\|624395_625739_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP014982.2\|WP_000908562.1\|645123_645627_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	7.2703e-63
NZ_CP014982.2\|WP_000802069.1\|635524_636409_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NZ_CP014982.2\|WP_000928379.1\|645613_645931_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	4.3214e-44
NZ_CP014982.2\|WP_000380404.1\|645968_646412_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	1.36854e-99
NZ_CP014982.2\|WP_000105461.1\|626366_626819_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.39218e-79
NZ_CP014982.2\|WP_000532745.1\|640624_641344_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.17265e-108
NZ_CP014982.2\|WP_000224386.1\|638630_639875_+\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	0
NZ_CP014982.2\|WP_001031038.1\|626846_628349_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP014982.2\|WP_014343907.1\|642506_643403_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0

>NZ_CP014982.2|WP_010723222.1|636514_636595_+|protein-YrbN
MKIADQFHDELCRLAAINFEAHVLHG
>NZ_CP014982.2|WP_000802069.1|635524_636409_+|lipoprotein-NlpI
MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ
>NZ_CP014982.2|WP_001670767.1|633279_635415_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
>NZ_CP014982.2|WP_000059465.1|632768_633038_+|30S-ribosomal-protein-S15
MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>NZ_CP014982.2|WP_000089674.1|631673_632618_+|tRNA-pseudouridine(55)-synthase-TruB
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDEGRVAPRRLVVEYPA
>NZ_CP014982.2|WP_001040199.1|631272_631674_+|30S-ribosome-binding-factor-RbfA
MAKEFGRPQRVAQEMQKEIAIILQREIKDPRLGMMTTVSGVEMSRDLAYAKVFVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED
>NZ_CP014982.2|WP_063328693.1|628373_631052_+|translation-initiation-factor-IF-2
MTDVTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAEPLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA
>NZ_CP014982.2|WP_001031038.1|626846_628349_+|transcription-termination/antitermination-protein-NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMAFKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>NZ_CP014982.2|WP_000105461.1|626366_626819_+|ribosome-maturation-factor-RimP
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>NZ_CP014982.2|WP_000207654.1|624395_625739_-|argininosuccinate-synthase
MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDESVKIPAEVVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQGRWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKAERLTMEKGESVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKGK
>NZ_CP014982.2|WP_000224386.1|638630_639875_+|tryptophan-permease
MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFLPPMIGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGKPMIVLILLFGVGNALVHILSSFNLLPVYQ
>NZ_CP014982.2|WP_001294027.1|639935_640466_-|hypothetical-protein
MSEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCNSGESEKNIYAEHINFNKETQIVTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALIYYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDEHGEALAEELYNKQGFI
>NZ_CP014982.2|WP_000532745.1|640624_641344_+|murein-L,D-transpeptidase
MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTTLP
>NZ_CP014982.2|WP_000130437.1|641321_642329_-|LLM-class-flavin-dependent-oxidoreductase
MTDKTIPFSVLDLAPIPEGSSAKEAFTHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPTMRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEQIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRTQFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENMETFRSPSEQYGVQQALSMSLVGDKAKVRHGLESILRETQADEIMVNGQIFDHQARLHSFDLAMDVKEELLG
>NZ_CP014982.2|WP_014343907.1|642506_643403_-|U32-family-peptidase
MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVVLSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGLVDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>NZ_CP014982.2|WP_000421309.1|643393_644389_-|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP014982.2|WP_000884721.1|644605_645130_+|SCP2-domain-containing-protein
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
>NZ_CP014982.2|WP_000908562.1|645123_645627_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEYHDHFNRF
>NZ_CP014982.2|WP_000928379.1|645613_645931_-|GIY-YIG-nuclease-family-protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
>NZ_CP014982.2|WP_000380404.1|645968_646412_+|YhbP-family-protein
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA

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Crispr_ID: NZ_CP014982_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014982_2

1019331-1021251

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

31 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP014982_2

>merge|NZ_CP014982|2|1019331-1021251|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTTTGCCGATCCCCTTCCAGACCACCCTTTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCAGAGTTGTATCTTACCCTGTTTACGTTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTATCCCAATATATTTCGCTATCAGTTACATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTCATTAAATAACTATATAACCCCCGGACTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCAGAACCGTTTGACTTACTGTGGCCATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATCGGGTGGTGCCGGTGGGCCATGTGGCGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGCGGTTGAGTAACTCCTCGTCCACGTCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCCAGCGCTCGAATTTATTTGAGGCCACCACGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTGATACGTAGTATTCATTACGCCTCCTAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGAGGTCAATAAAAAATGGTGTGGCTTTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGGAACAGGAAAAAAAAGATTTGTCCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATCCTCAACGGTCAGGCTGTTTAGTTCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGAGGATGGAATATTTCCGAGGCTGGCGATTGTGTTCCCCGCGCTAGCGGGGATAAACCGATGCCGGAACGCTGATGGCGTTTGACATGAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTATTTCTGTGGCTGGGGTTTCGATTCGATGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTATTTCTGTGGCTGGGGTTTCGATTCGATGTGTTCCCCGCGCCAGCGGGGATAAACCGTGACGCTGGTCTATACCGGCAACGAACGCGACGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGACGGTGACGTCAGTGCCGAAGGCGAAATAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCTTACGCTATTTACGACGTTATTGAGCAGTGTTCCCCGCGCCAGCAGGGATAAATCGAAACGAAAGAGGCTATGCGGTTGTTTATCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCGATAGAGACGCTTCTGTAGTCACTGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGCGTGTTCCCCGCGCCAGCGGGGATAAGCCGCGTCACTTTCTGACATTTTATTCAGTTCGTTAGTGTTCCCCGTGCCAGCGGGGATAAACCGTCATTTCTGGACGGGGCTGTGTGACGAATACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCCAATTAACCCAAACTTTGCGCGCTTAATATGTTCCCCGCGCTAGCGGGGATAAACCGGGATATGTGAAGTTCAGGTAGCCCATTACGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATCGAGAGTGCGAAGAGGCAGAACGGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTATGCGCAAAAATTAATTCATATTATAGTGTTCCCCGCGCCAGCAGGGATAAACCGGACGAGTTCTGGAAATGGTTAGCTGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTCATCGGCAGCGTCACGCAATATGAAGATGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP014982|2|1|1019331-1021190|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGCCGATCCCCTTCCAGACCACCCTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCAGAGTTGTATCTTACCCTGTTTACGTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATCCCAATATATTTCGCTATCAGTTACATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCATTAAATAACTATATAACCCCCGGACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAGAACCGTTTGACTTACTGTGGCCATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGATACGTAGTATTCATTACGCCTCCTAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAGGATGGAATATTTCCGAGGCTGGCGATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATGCCGGAACGCTGATGGCGTTTGACATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGCTGGTCTATACCGGCAACGAACGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGTGACGTCAGTGCCGAAGGCGAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCTTACGCTATTTACGACGTTATTGAGCA
GTGTTCCCCGCGCCAGCAGGGATAAATCG	AAACGAAAGAGGCTATGCGGTTGTTTATCGGTGTG
TTCCCCGCGCCAGCGGGGATAAACCGCCC	CGATAGAGACGCTTCTGTAGTCACTGGCAGTG
TTCCCCGCGCCAGCGGGGATAAACCGGTG	AGTTCGGTTTTAATTTCGTCGCTAAGCTGCGTG
TTCCCCGCGCCAGCGGGGATAAGCCGCGT	CACTTTCTGACATTTTATTCAGTTCGTTAGTG
TTCCCCGTGCCAGCGGGGATAAACCGTCA	TTTCTGGACGGGGCTGTGTGACGAATACGGTG
TTCCCCGCGCCAGCGGGGATAAACCGTGT	CCAATTAACCCAAACTTTGCGCGCTTAATATG
TTCCCCGCGCTAGCGGGGATAAACCGGGA	TATGTGAAGTTCAGGTAGCCCATTACGCAGTG
TTCCCCGCGCCAGCGGGGATAAACCGTTG	ATCGAGAGTGCGAAGAGGCAGAACGGGCAGTG
TTCCCCGCGCCAGCGGGGATAAACCGCAG	GTTATGCGCAAAAATTAATTCATATTATAGTG
TTCCCCGCGCCAGCAGGGATAAACCGGAC	GAGTTCTGGAAATGGTTAGCTGATAAAGAGTG
TTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP014982|2|2|1019331-1021251|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGCCGATCCCCTTCCAGACCACCCTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCAGAGTTGTATCTTACCCTGTTTACGTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATCCCAATATATTTCGCTATCAGTTACATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCATTAAATAACTATATAACCCCCGGACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAGAACCGTTTGACTTACTGTGGCCATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGATACGTAGTATTCATTACGCCTCCTAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAGGATGGAATATTTCCGAGGCTGGCGATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATGCCGGAACGCTGATGGCGTTTGACATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGCTGGTCTATACCGGCAACGAACGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGTGACGTCAGTGCCGAAGGCGAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCTTACGCTATTTACGACGTTATTGAGCA
GTGTTCCCCGCGCCAGCAGGGATAAATCG	AAACGAAAGAGGCTATGCGGTTGTTTATCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCGATAGAGACGCTTCTGTAGTCACTGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	CGTCACTTTCTGACATTTTATTCAGTTCGTTA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCATTTCTGGACGGGGCTGTGTGACGAATACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
ATGTTCCCCGCGCTAGCGGGGATAAACCG	GGATATGTGAAGTTCAGGTAGCCCATTACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP014982|2|1|1019331-1021251|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGCCGATCCCCTTCCAGACCACCCTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCAGAGTTGTATCTTACCCTGTTTACGTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATCCCAATATATTTCGCTATCAGTTACATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCATTAAATAACTATATAACCCCCGGACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAGAACCGTTTGACTTACTGTGGCCATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGATACGTAGTATTCATTACGCCTCCTAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAGGATGGAATATTTCCGAGGCTGGCGATT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ATGCCGGAACGCTGATGGCGTTTGACATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGCTGGTCTATACCGGCAACGAACGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGGTGACGTCAGTGCCGAAGGCGAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCTTACGCTATTTACGACGTTATTGAGCA
GTGTTCCCCGCGCCAGCAGGGATAAATCG	AAACGAAAGAGGCTATGCGGTTGTTTATCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCGATAGAGACGCTTCTGTAGTCACTGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	CGTCACTTTCTGACATTTTATTCAGTTCGTTA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCATTTCTGGACGGGGCTGTGTGACGAATACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
ATGTTCCCCGCGCTAGCGGGGATAAACCG	GGATATGTGAAGTTCAGGTAGCCCATTACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014982.2\|WP_000046849.1\|1009130_1010426_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP014982.2\|WP_001199961.1\|1018362_1019034_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP014982.2\|WP_000210863.1\|1015208_1016846_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP014982.2\|WP_000480218.1\|1012795_1013152_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP014982.2\|WP_000036734.1\|1016928_1018227_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP014982.2\|WP_000226838.1\|1010477_1012712_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP014982.2\|WP_000186400.1\|1006316_1009073_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP014982.2\|WP_001145543.1\|1027428_1028382_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP014982.2\|WP_001290660.1\|1024818_1026531_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP014982.2\|WP_001208013.1\|1021348_1022146_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP014982.2\|WP_000080404.1\|1026606_1027341_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP014982.2\|WP_000210927.1\|1023019_1024819_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP014982.2\|WP_000117946.1\|1033054_1033615_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP014982.2\|WP_000706479.1\|1005130_1006273_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP014982.2\|WP_000368584.1\|1031501_1033058_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP014982.2\|WP_000210449.1\|1014180_1014981_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP014982.2\|WP_000206415.1\|1033628_1034687_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP014982.2\|WP_023972691.1\|1028826_1031490_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP014982.2\|WP_000108313.1\|1022233_1022596_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP014982.2\|WP_001532579.1\|1013117_1013414_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194

Protein	Function_ID	Function_description	E-value
NZ_CP014982.2\|WP_000046849.1\|1009130_1010426_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP014982.2\|WP_001199961.1\|1018362_1019034_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP014982.2\|WP_000210863.1\|1015208_1016846_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP014982.2\|WP_000480218.1\|1012795_1013152_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP014982.2\|WP_000036734.1\|1016928_1018227_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP014982.2\|WP_000226838.1\|1010477_1012712_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP014982.2\|WP_000186400.1\|1006316_1009073_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP014982.2\|WP_001145543.1\|1027428_1028382_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP014982.2\|WP_001290660.1\|1024818_1026531_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP014982.2\|WP_001208013.1\|1021348_1022146_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	8.44116e-102
NZ_CP014982.2\|WP_000080404.1\|1026606_1027341_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP014982.2\|WP_000210927.1\|1023019_1024819_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP014982.2\|WP_000117946.1\|1033054_1033615_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP014982.2\|WP_000706479.1\|1005130_1006273_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP014982.2\|WP_000368584.1\|1031501_1033058_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP014982.2\|WP_000210449.1\|1014180_1014981_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP014982.2\|WP_000206415.1\|1033628_1034687_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP014982.2\|WP_023972691.1\|1028826_1031490_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP014982.2\|WP_000108313.1\|1022233_1022596_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP014982.2\|WP_001532579.1\|1013117_1013414_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13

>NZ_CP014982.2|WP_001199961.1|1018362_1019034_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP014982.2|WP_000036734.1|1016928_1018227_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP014982.2|WP_000210863.1|1015208_1016846_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP014982.2|WP_000210449.1|1014180_1014981_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP014982.2|WP_001532579.1|1013117_1013414_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>NZ_CP014982.2|WP_000480218.1|1012795_1013152_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP014982.2|WP_000226838.1|1010477_1012712_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP014982.2|WP_000046849.1|1009130_1010426_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP014982.2|WP_000186400.1|1006316_1009073_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP014982.2|WP_000706479.1|1005130_1006273_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP014982.2|WP_001208013.1|1021348_1022146_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDSSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP014982.2|WP_000108313.1|1022233_1022596_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP014982.2|WP_000210927.1|1023019_1024819_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP014982.2|WP_001290660.1|1024818_1026531_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP014982.2|WP_000080404.1|1026606_1027341_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP014982.2|WP_001145543.1|1027428_1028382_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP014982.2|WP_023972691.1|1028826_1031490_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMLINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP014982.2|WP_000368584.1|1031501_1033058_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP014982.2|WP_000117946.1|1033054_1033615_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP014982.2|WP_000206415.1|1033628_1034687_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA

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Crispr_ID: NZ_CP014982_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014982_3

1037380-1038145

TypeI-E

I-E

Consensus_repeat	Method
AGTGTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR

12 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP014982_3

>merge|NZ_CP014982|3|1037380-1038145|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
AGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTGAGCAACGACAGTAAATAATTTTTCGTGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTGCGGATTATCGTTAAGACTGAAGGAAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCAGGGCGATATTGTTGTTGGTGAATGGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCGCGGAAAATTTCGCATTGACGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTACGTGTTTATTCATCTGTTGCATTAGATTCGTGTTCCCCGCGCCAGCGGGGATAAACCTGAGGCGTACAGGCTGTTAGATGAGAAATTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGCCCCGAATGTGTTTGCCTCGCCCGCTGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGATTATCTGTATTTTACGGAAGTGGGCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCGTTCATCAGGCACTACCGGCACTTTCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGATATTCGCCGCTTTCCATTTACCGAACGTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCACGTTCGGCGATGTTGGCCCCATCGGTCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACGGTAGTGTTTTAAAACCGTTTCGAGGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGA

>NZ_CP014982|3|2|1037380-1037533|PILER-CR
AGTGTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTG
CTGGTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGA
AGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCAGGGCGATATTGTTGTTGGTGAATGGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCGCGGAAAATTTCGCATTGACGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACC	GTTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCACGTTCGGCGATGTTGGCCCCATCGGTCCA


>NZ_CP014982|3|3|1037383-1038145|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCAGGGCGATATTGTTGTTGGTGAATGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCGA

>NZ_CP014982|3|2|1037383-1038144|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCAGGGCGATATTGTTGTTGGTGAATGGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP014982|3|3|1037627-1038081|PILER-CR
	TGAGCAACGACAGTAAATAATTTTTCGTG
CTGGTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGA
AGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCAGGGCGATATTGTTGTTGGTGAATGGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCGCGGAAAATTTCGCATTGACGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACC	GTTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014982.2\|WP_000368584.1\|1031501_1033058_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP014982.2\|WP_000144831.1\|1036072_1036993_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP014982.2\|WP_001518648.1\|1036992_1037286_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP014982.2\|WP_001145543.1\|1027428_1028382_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP014982.2\|WP_000085114.1\|1034697_1035444_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP014982.2\|WP_000490481.1\|1038810_1039857_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP014982.2\|WP_000080404.1\|1026606_1027341_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP014982.2\|WP_000117946.1\|1033054_1033615_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP014982.2\|WP_000134246.1\|1045137_1046187_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP014982.2\|WP_000281486.1\|1035425_1036076_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP014982.2\|WP_000372384.1\|1040107_1041016_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP014982.2\|WP_000206415.1\|1033628_1034687_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP014982.2\|WP_023972691.1\|1028826_1031490_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP014982.2\|WP_001092263.1\|1041025_1042465_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP014982.2\|WP_001537530.1\|1043107_1043431_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP014982.2\|WP_001221538.1\|1046167_1046929_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP014982.2\|WP_001173663.1\|1042451_1043057_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP014982.2\|WP_000517480.1\|1043621_1043933_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP014982.2\|WP_000741650.1\|1043951_1044662_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP014982.2\|WP_001219245.1\|1044661_1045141_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851

Protein	Function_ID	Function_description	E-value
NZ_CP014982.2\|WP_000368584.1\|1031501_1033058_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP014982.2\|WP_000144831.1\|1036072_1036993_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.59811e-156
NZ_CP014982.2\|WP_001518648.1\|1036992_1037286_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP014982.2\|WP_001145543.1\|1027428_1028382_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP014982.2\|WP_000085114.1\|1034697_1035444_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP014982.2\|WP_000490481.1\|1038810_1039857_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP014982.2\|WP_000080404.1\|1026606_1027341_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP014982.2\|WP_000117946.1\|1033054_1033615_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP014982.2\|WP_000134246.1\|1045137_1046187_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP014982.2\|WP_000281486.1\|1035425_1036076_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP014982.2\|WP_000372384.1\|1040107_1041016_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP014982.2\|WP_000206415.1\|1033628_1034687_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP014982.2\|WP_023972691.1\|1028826_1031490_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP014982.2\|WP_001092263.1\|1041025_1042465_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP014982.2\|WP_001537530.1\|1043107_1043431_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_CP014982.2\|WP_001221538.1\|1046167_1046929_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP014982.2\|WP_001173663.1\|1042451_1043057_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP014982.2\|WP_000517480.1\|1043621_1043933_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP014982.2\|WP_000741650.1\|1043951_1044662_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP014982.2\|WP_001219245.1\|1044661_1045141_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104

>NZ_CP014982.2|WP_001518648.1|1036992_1037286_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP014982.2|WP_000144831.1|1036072_1036993_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRAVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP014982.2|WP_000281486.1|1035425_1036076_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP014982.2|WP_000085114.1|1034697_1035444_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP014982.2|WP_000206415.1|1033628_1034687_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP014982.2|WP_000117946.1|1033054_1033615_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP014982.2|WP_000368584.1|1031501_1033058_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP014982.2|WP_023972691.1|1028826_1031490_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMLINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP014982.2|WP_001145543.1|1027428_1028382_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP014982.2|WP_000080404.1|1026606_1027341_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP014982.2|WP_000490481.1|1038810_1039857_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP014982.2|WP_000372384.1|1040107_1041016_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP014982.2|WP_001092263.1|1041025_1042465_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP014982.2|WP_001173663.1|1042451_1043057_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP014982.2|WP_001537530.1|1043107_1043431_+|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP014982.2|WP_000517480.1|1043621_1043933_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP014982.2|WP_000741650.1|1043951_1044662_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP014982.2|WP_001219245.1|1044661_1045141_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP014982.2|WP_000134246.1|1045137_1046187_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP014982.2|WP_001221538.1|1046167_1046929_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: NZ_CP014982_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014982_4

1038219-1038796

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

9 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP014982_4

>merge|NZ_CP014982|4|1038219-1038796|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAGCCGTTTCCGCTAAATACCCCCGCAGTGATTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCTTGAATATGATTGCGGGTATATGTGGATAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTGGTTATAACATCGCAGCAAAATCAAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCACTATTTCGAATGTCTCGACGCCAGATTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACGAATTGAGACTATTAGAGATTATTCGCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAACCCATTAATTAACTAAGCAGTAATAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGTGACGAGGTGCGAGCGATGGTATCAAGGCCTAGTGTTTCCCGCGCCAGCGGGGATAAACCGGGTTAACCAGGGGTTTTTCCCCACTATTTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAATGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP014982|4|4|1038219-1038735|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCTTGAATATGATTGCGGGTATATGTGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACTATTTCGAATGTCTCGACGCCAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP014982|4|4|1038219-1038796|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCTTGAATATGATTGCGGGTATATGTGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACTATTTCGAATGTCTCGACGCCAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP014982|4|3|1038219-1038796|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCTTGAATATGATTGCGGGTATATGTGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACTATTTCGAATGTCTCGACGCCAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014982.2\|WP_000368584.1\|1031501_1033058_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP014982.2\|WP_000144831.1\|1036072_1036993_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP014982.2\|WP_001518648.1\|1036992_1037286_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP014982.2\|WP_001145543.1\|1027428_1028382_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP014982.2\|WP_000085114.1\|1034697_1035444_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP014982.2\|WP_000490481.1\|1038810_1039857_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP014982.2\|WP_000080404.1\|1026606_1027341_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP014982.2\|WP_000117946.1\|1033054_1033615_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP014982.2\|WP_000134246.1\|1045137_1046187_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP014982.2\|WP_000281486.1\|1035425_1036076_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP014982.2\|WP_000372384.1\|1040107_1041016_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP014982.2\|WP_000206415.1\|1033628_1034687_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP014982.2\|WP_023972691.1\|1028826_1031490_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP014982.2\|WP_001092263.1\|1041025_1042465_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP014982.2\|WP_001537530.1\|1043107_1043431_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP014982.2\|WP_001221538.1\|1046167_1046929_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP014982.2\|WP_001173663.1\|1042451_1043057_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP014982.2\|WP_000517480.1\|1043621_1043933_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP014982.2\|WP_000741650.1\|1043951_1044662_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP014982.2\|WP_001219245.1\|1044661_1045141_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851

Protein	Function_ID	Function_description	E-value
NZ_CP014982.2\|WP_000368584.1\|1031501_1033058_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP014982.2\|WP_000144831.1\|1036072_1036993_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.59811e-156
NZ_CP014982.2\|WP_001518648.1\|1036992_1037286_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP014982.2\|WP_001145543.1\|1027428_1028382_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP014982.2\|WP_000085114.1\|1034697_1035444_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP014982.2\|WP_000490481.1\|1038810_1039857_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP014982.2\|WP_000080404.1\|1026606_1027341_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP014982.2\|WP_000117946.1\|1033054_1033615_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP014982.2\|WP_000134246.1\|1045137_1046187_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP014982.2\|WP_000281486.1\|1035425_1036076_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP014982.2\|WP_000372384.1\|1040107_1041016_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP014982.2\|WP_000206415.1\|1033628_1034687_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP014982.2\|WP_023972691.1\|1028826_1031490_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP014982.2\|WP_001092263.1\|1041025_1042465_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP014982.2\|WP_001537530.1\|1043107_1043431_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_CP014982.2\|WP_001221538.1\|1046167_1046929_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP014982.2\|WP_001173663.1\|1042451_1043057_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP014982.2\|WP_000517480.1\|1043621_1043933_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP014982.2\|WP_000741650.1\|1043951_1044662_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP014982.2\|WP_001219245.1\|1044661_1045141_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104

>NZ_CP014982.2|WP_001518648.1|1036992_1037286_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP014982.2|WP_000144831.1|1036072_1036993_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRAVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP014982.2|WP_000281486.1|1035425_1036076_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP014982.2|WP_000085114.1|1034697_1035444_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP014982.2|WP_000206415.1|1033628_1034687_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP014982.2|WP_000117946.1|1033054_1033615_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP014982.2|WP_000368584.1|1031501_1033058_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP014982.2|WP_023972691.1|1028826_1031490_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMLINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP014982.2|WP_001145543.1|1027428_1028382_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP014982.2|WP_000080404.1|1026606_1027341_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP014982.2|WP_000490481.1|1038810_1039857_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP014982.2|WP_000372384.1|1040107_1041016_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP014982.2|WP_001092263.1|1041025_1042465_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP014982.2|WP_001173663.1|1042451_1043057_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP014982.2|WP_001537530.1|1043107_1043431_+|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP014982.2|WP_000517480.1|1043621_1043933_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP014982.2|WP_000741650.1|1043951_1044662_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP014982.2|WP_001219245.1|1044661_1045141_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP014982.2|WP_000134246.1|1045137_1046187_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP014982.2|WP_001221538.1|1046167_1046929_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: NZ_CP014982_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014982_5

1228945-1229054

Orphan

Consensus_repeat	Method
TGTCCCACCCTGTACCACTTTTTTTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014982_5

>merge|NZ_CP014982|5|1228945-1229054|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTTAATCAAATTCTCTAAGGTGGGACGCTGTAACCCTCGCCAGCTCTGCGTGTACCACTTGTCCCACCCTGTACCACCTTTTTTTAA

>NZ_CP014982|5|5|1228945-1229054|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTTAA	TCAAATTCTCTAAGGTGGGACGCTGTAACCCTCGCCAGCTCTGCGTGTACCACT
TGTCCCACCCTGTACCACCTTTTTTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014982.2\|WP_000196159.1\|1238243_1240424_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
NZ_CP014982.2\|WP_010989065.1\|1225914_1226271_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP014982.2\|WP_001520307.1\|1229071_1231141_-\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NZ_CP014982.2\|WP_000701821.1\|1231176_1231392_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP014982.2\|WP_001098984.1\|1223553_1224534_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_CP014982.2\|WP_001518569.1\|1253982_1254465_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP014982.2\|WP_000242603.1\|1254614_1255091_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP014982.2\|WP_000021514.1\|1216088_1217768_-\|SgrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226909
NZ_CP014982.2\|WP_000811366.1\|1219661_1220504_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284075
NZ_CP014982.2\|WP_000480483.1\|1224901_1225423_-\|PTS-glucitol/sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
NZ_CP014982.2\|WP_000533858.1\|1240420_1241830_-\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP014982.2\|WP_001033832.1\|1222529_1223543_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP014982.2\|WP_010989064.1\|1226424_1227243_-\|DUF4435-domain-containing-protein	unknown	unknown	gnl\|CDD\|373095
NZ_CP014982.2\|WP_001682344.1\|1220503_1221067_+\|6-phospho-3-hexuloisomerase	unknown	unknown	gnl\|CDD\|132171
NZ_CP014982.2\|WP_010989063.1\|1234586_1235180_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014982.2\|WP_010989057.1\|1237072_1238236_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP014982.2\|WP_001161781.1\|1231842_1232670_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014982.2\|WP_041112835.1\|1241894_1253369_-\|biofilm-associated-protein-BapA	unknown	unknown	gnl\|CDD\|375438
NZ_CP014982.2\|WP_000973738.1\|1224530_1224905_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|226254
NZ_CP014982.2\|WP_000749979.1\|1225535_1225820_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225957

Protein	Function_ID	Function_description	E-value
NZ_CP014982.2\|WP_000196159.1\|1238243_1240424_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP014982.2\|WP_010989065.1\|1225914_1226271_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.55924e-09
NZ_CP014982.2\|WP_001520307.1\|1229071_1231141_-\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NZ_CP014982.2\|WP_000701821.1\|1231176_1231392_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.37497e-21
NZ_CP014982.2\|WP_001098984.1\|1223553_1224534_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.31232e-179
NZ_CP014982.2\|WP_001518569.1\|1253982_1254465_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	1.11352e-88
NZ_CP014982.2\|WP_000242603.1\|1254614_1255091_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	9.22397e-113
NZ_CP014982.2\|WP_000021514.1\|1216088_1217768_-\|SgrR-family-transcriptional-regulator	gnl\|CDD\|226909	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	0
NZ_CP014982.2\|WP_000811366.1\|1219661_1220504_+\|hypothetical-protein	gnl\|CDD\|284075	pfam06560, GPI, Glucose-6-phosphate isomerase (GPI). This family consists of several bacterial and archaeal glucose-6-phosphate isomerase (GPI) proteins (EC:5.3.1.9).	1.31365e-90
NZ_CP014982.2\|WP_000480483.1\|1224901_1225423_-\|PTS-glucitol/sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	2.29561e-79
NZ_CP014982.2\|WP_000533858.1\|1240420_1241830_-\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	5.87074e-128
NZ_CP014982.2\|WP_001033832.1\|1222529_1223543_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.77409e-67
NZ_CP014982.2\|WP_010989064.1\|1226424_1227243_-\|DUF4435-domain-containing-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	2.33424e-50
NZ_CP014982.2\|WP_001682344.1\|1220503_1221067_+\|6-phospho-3-hexuloisomerase	gnl\|CDD\|132171	TIGR03127, RuMP_HxlB, 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.	4.43418e-80
NZ_CP014982.2\|WP_010989057.1\|1237072_1238236_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	3.18004e-97
NZ_CP014982.2\|WP_041112835.1\|1241894_1253369_-\|biofilm-associated-protein-BapA	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.22918e-22
NZ_CP014982.2\|WP_000973738.1\|1224530_1224905_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	5.89598e-59
NZ_CP014982.2\|WP_000749979.1\|1225535_1225820_-\|transcriptional-regulator	gnl\|CDD\|225957	COG3423, Nlp, Predicted transcriptional regulator [Transcription].	5.31271e-38

>NZ_CP014982.2|WP_010989064.1|1226424_1227243_-|DUF4435-domain-containing-protein
MLLLFRSPKYSRKIFFTLEGESDIRFLNTHFADERIHYDSPCSGKPEVINAVQLLRSHGKQNVYGLCDADFDILEGNSYENIHFTDCHDLEMMLIEGGSFDKFISEFLKTSILRIHTLEDIRNNLKESIIDVTYKIGILKWLNFKNNLLLMFKGMKYDNFITFVDFSANIDIDNYIQHILDRSPRKPPHCDFNFLKKEYQLLYNKQADYKYVCNGHDFTYITMMAFHSEFSRDKNITQEKVESHLRIAYSATAFQRTNIYNELSGLIDSHNI
>NZ_CP014982.2|WP_010989065.1|1225914_1226271_+|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCMFRCRIAIVIGKRLKISRVRADLTQAELGALAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGSTLILSGNI
>NZ_CP014982.2|WP_000749979.1|1225535_1225820_-|transcriptional-regulator
MKKSTTKDWHPADIVAALHKRGTSLAKLSREAGLASSTLSNTLTRPWPKGEWLIAIALDMHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>NZ_CP014982.2|WP_000480483.1|1224901_1225423_-|PTS-glucitol/sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTVRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSRRGNAP
>NZ_CP014982.2|WP_000973738.1|1224530_1224905_-|PTS-glucitol/sorbitol-transporter-subunit-IIA
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLLLAGHDYLVTAVGKGVQQALFELGHLTLVFDGDLKPCHTGAIHLSGPVPKLHDLHGNLVIEEGRP
>NZ_CP014982.2|WP_001098984.1|1223553_1224534_-|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEVVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAQFISEDNYVSGVTIEQLVLVDTAEAPDGEPEPVSVTAPRIITTPPPARGAEKLVRMVERTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHALTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NZ_CP014982.2|WP_001033832.1|1222529_1223543_-|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
>NZ_CP014982.2|WP_001682344.1|1220503_1221067_+|6-phospho-3-hexuloisomerase
METQSVAGVACSDLNQAMSRIDGAALARLEQAIADAKAVFVFGAGRSLLMLKAFAMRLMHIGLKVHVVGDVVTPALQKGDLLLLASASGETASLVNVATKAKQLGGTVALLTIFPESTLGKLAGVAVRIPAYSDKLPDGPENVKGILPGGSLFEEAVMVLGDAMIVNLAQSTGYRLTKGFALHANLE
>NZ_CP014982.2|WP_000811366.1|1219661_1220504_+|hypothetical-protein
MKQLHHSGLPLYLDDDGVMALKPPLNYLGFGRKSAGQMAVVLPEFTEGLRNEPAYDVYRGLSFAEDQERLAADQYQYDITIIMPGTIGKERKKTSGHYHGYNDTRRNTHPEVYEVIKGTAAYILQKSPDFAAAPQELVVDDLIVAVVKEGQSIIVPPNYGHCSINIGDGPLVFSNLAYKPCTVHYDTVQFYHGMACYIVEENGQLCVRKNHYYPRVPRIKFATVKENPHLGITFDMPLYQRYRAAPERFHFLGHVDNYVREIMGMLQYEDDLFPLCQEDA
>NZ_CP014982.2|WP_000021514.1|1216088_1217768_-|SgrR-family-transcriptional-regulator
MSIFEAHFRRLHARYGAGQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGRGKRSRLHLLTSPEKLFSQNVNKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSETRVRIPYYRNLDPLNPLVPLRRTERHLLRQCLSGLTRYDAVQGRIVPDIAHYWTHNEDFTRWEFWLKSTARFADGCELDASAVQRCLLAASQSPQFAPIFSPIKTITADAPWHLVIETHHPVRRLDCLLATQPTMLFDYQHGHIRCTGAFHLQEHSDNFMVLRRNQHWHQARPGLDEITIFTWAPEHISMSFIPLLRGEEVQDDRPLNERSLEQSCCFVLLDGDGAFADEAGRRFINYLLQPVELLSQTQLPDEYARILSVAQGMLPQWNHRPVDFGGITAPFNLRQPVIISTFQQPELVELAGAIRRLLERWHIRAEIRIDAFDHFNNQLRPPADIWLSNFMLDTLSVPAFLEWLASTALFTRLPESQRQNLNALLPTILNSDDEQAFATIAAFFHEMTHQRYVIPLLHHWMEFATEKSFTWRDLNTLGWPDFSQLWLE
>NZ_CP014982.2|WP_001520307.1|1229071_1231141_-|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPMVLGPNELADLSNLTIIRPDTLYVRVLRTGDISEEDLLKIAVKLAHAGVQMARLMSPDGELLENWTGQLERLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDGSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTNISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPDGDNVILQGSHYLTGGFAQAGTLAEWQEQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERIYAGMDVRMVQIPSDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQNALMPDNAGNQVQRIVARFALLAAAGEIATLHGITGWQKGTAYEAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMAGFRRVEKDPLTGEEHTLFFILPEGWREICRGFSPARAARLCQEAECLQPGSDGKYQSQVRLPEIGKTRVYRLTSRILSI
>NZ_CP014982.2|WP_000701821.1|1231176_1231392_-|AlpA-family-transcriptional-regulator
MKIRADSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRTVIR
>NZ_CP014982.2|WP_001161781.1|1231842_1232670_+|hypothetical-protein
MQGLTMDDISLSIARNMFHLQVYESDGVRFEDLFSKIMYYKSPDFQQVKPYGNIGDRKNDGFIKGQGVYYQVYAPEDASNNVLAAVNKIKDDFEGLRDYWHDICPIKKYYFVLNDKYKGSLPQLHKELIVLQSDFNLIDTGVIVAKDLERELFNLPDDMIRSVVGHLPDIDHEEYMFVSGFTCFISAWINFEKIARHKVFSAKQPNRPLFIGKVVNALVKNKIISRQDATFIKKITEVRNSLVHGVSMLVPKKNEIDMLIFITEKIKPAGVCRLD
>NZ_CP014982.2|WP_010989063.1|1234586_1235180_-|hypothetical-protein
MPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPSEVKDRSLKAVMKLSRNSRGRKWLKTLGDDALPDLTASTQPSLRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDQILRKLKTLAKEQELPSDGLGRGTFYEVLKMEREK
>NZ_CP014982.2|WP_010989057.1|1237072_1238236_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MDDPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
>NZ_CP014982.2|WP_000196159.1|1238243_1240424_-|type-I-secretion-system-permease/ATPase
MTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
>NZ_CP014982.2|WP_000533858.1|1240420_1241830_-|TolC-family-outer-membrane-protein
MGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
>NZ_CP014982.2|WP_041112835.1|1241894_1253369_-|biofilm-associated-protein-BapA
MRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVAREEISQLTRINQDLVVRLHSGETITIKNFYVTNALGASQLVLAENDGTLWWVENPQAGLHFEQIADINELLVTSGASHEAGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHHSDGDNPPPDNTNPDGNPPDNSNPGGSTPNGNTPGSSNPVDTTPPLAPGELLISADGKTVSGQAEAGSTITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPVITAAIDDAAPLTGTLSNNQFTNDNTPTLEGTGSAGTVIHIYANGQEIGSTTVDTSGNWHFAITSALADGENHFTAIATNVKGESSESARFTLTIDTLIPDAPRVELIADNTSLLTGPLQNNDRTDEAKPLFSGQGDAGNTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNTSRVTTTPTIIVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDATDDNRPTLSGTAEPGSTISINDNGFPVATFPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTIDIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSLGNTLGSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPDGLTVATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIATPDGKPLGSGKADGEGHFTLPLVPAQTNGEQVTVTATDSANNVSPPTTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEVFDNGFSLGLATLQPNGAWTFTPSQNLGEGAHRLTVIATDAKGNASQAASFDLVVDTQSPQQPVITFITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWSYAYTTASPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVADGDGNTIDTNQITQESQPRLSGSGTAGDTIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHLLTARANDPAGNESPESISFTLRIDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPGTIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSGVFSVTLDTQPPAQPDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDRAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVDETGTWTLPVTSALPDGVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGVWTFNTPELSEASHALTFSATDDAGNTTVQTQPITITVDITAPPAPTVQTVDDDGTRVAGIADPYATVEIHHIDGTLVGSAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAAGGATDDTTPTLRGTTDIGSTVEVFIDGDSAGFATVDASGNWIFEIATPLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNAPLESNAHIFTAVATDPAGNSGQPSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSAPWTIVVDITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRGEAGATINVYLDGNPASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTGEAGTTISIYNGSALVGTAQVQANGSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTRETNTTIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGGVTGNLANGQITNDNRPTLNGTAEAGSVVSIYDGDTLLGVTSANASGAWSFTPTTGLNDGTRTLTVTATDPAGNVSPATSGFTIVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTAALGQGSHAYSVSAADAAGNVSAASPSITIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSETGVVLGTATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAPIITNVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGNWSFTPTGNLTEGSHAFTATATNANGTGSVSTAATVIVDTLAPGTPSGTLSADGGSLSGLAEANSTVTVTLTGGVTLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPVLPLAARDNITSLDLTSTAVTSTQNYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTALGDFANLLTLTGSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVSTPVGAGGVDILGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLVINLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVQKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNVLTNDVVPTDALLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGTVPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHYGTLQINLDGAYTYTLNNGVAMSSITSKEVFTYQLDDKMGHTDSATLTIDMAPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGVDRWQNFSTAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGTGSAFKSTDLVTLENVQLTLNDLLQNNHLITSG
>NZ_CP014982.2|WP_001518569.1|1253982_1254465_-|SsrA-binding-protein-SmpB
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
>NZ_CP014982.2|WP_000242603.1|1254614_1255091_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MVLFTRFMLMGIAMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSRVLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLSPEACRIEFQLDFEFTNKLIELAFGRIFKELASNMVQAFTVRAKEVYRAG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014982_2	2.27\|1020950\|32\|NZ_CP014982\|PILER-CR	1020950-1020981	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
NZ_CP014982_2	2.27\|1020950\|32\|NZ_CP014982\|PILER-CR	1020950-1020981	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
NZ_CP014982_2	2.37\|1020947\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1020947-1020978	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
NZ_CP014982_2	2.37\|1020947\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1020947-1020978	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
NZ_CP014982_3	3.13\|1038022\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1038022-1038053	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
NZ_CP014982_3	3.13\|1038022\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1038022-1038053	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
NZ_CP014982_3	3.21\|1038021\|33\|NZ_CP014982\|PILER-CR	1038021-1038053	33	CP051275	Salmonella phage SW-37, complete genome	24294-24326	1	0.97
NZ_CP014982_3	3.21\|1038021\|33\|NZ_CP014982\|PILER-CR	1038021-1038053	33	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44003	1	0.97
NZ_CP014982_2	2.31\|1020580\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1020580-1020611	32	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	130783-130814	2	0.938
NZ_CP014982_3	3.13\|1038022\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1038022-1038053	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
NZ_CP014982_2	2.21\|1020580\|35\|NZ_CP014982\|PILER-CR	1020580-1020614	35	NZ_CP030204	Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence	130780-130814	4	0.886
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1387347-1387378	5	0.844
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1461559-1461590	5	0.844
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	599340-599371	5	0.844
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	NC_012528	Deinococcus deserti VCD115 plasmid 3, complete sequence	121315-121346	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	850282-850313	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	887728-887759	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	856045-856076	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	835457-835488	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	953948-953979	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	431895-431926	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	843687-843718	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	833486-833517	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	457962-457993	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1502459-1502490	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1188725-1188756	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1094940-1094971	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	574071-574102	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	758103-758134	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	92938-92969	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1622461-1622492	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	174090-174121	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	996227-996258	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	856529-856560	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1026857-1026888	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	801217-801248	6	0.812
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	887731-887762	6	0.812
NZ_CP014982_3	3.11\|1037900\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037900-1037931	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NZ_CP014982_3	3.19\|1037899\|33\|NZ_CP014982\|PILER-CR	1037899-1037931	33	MT774487	Salmonella phage MG40, complete genome	21745-21777	6	0.818
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	NZ_CP044078	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence	135155-135186	7	0.781
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	195902-195933	7	0.781
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	581076-581107	7	0.781
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	122557-122588	7	0.781
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	529537-529568	7	0.781
NZ_CP014982_2	2.6\|1019665\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019665-1019696	32	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	327444-327475	7	0.781
NZ_CP014982_2	2.11\|1019970\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019970-1020001	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208454-208485	7	0.781
NZ_CP014982_2	2.11\|1019970\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019970-1020001	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449563-449594	7	0.781
NZ_CP014982_2	2.11\|1019970\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019970-1020001	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167100-167131	7	0.781
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	360377-360408	7	0.781
NZ_CP014982_3	3.7\|1037656\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037656-1037687	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NZ_CP014982_3	3.7\|1037656\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037656-1037687	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NZ_CP014982_3	3.9\|1037778\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037778-1037809	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NZ_CP014982_3	3.11\|1037900\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037900-1037931	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NZ_CP014982_3	3.11\|1037900\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037900-1037931	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NZ_CP014982_3	3.11\|1037900\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037900-1037931	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NZ_CP014982_3	3.11\|1037900\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037900-1037931	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NZ_CP014982_3	3.19\|1037899\|33\|NZ_CP014982\|PILER-CR	1037899-1037931	33	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39484	7	0.788
NZ_CP014982_3	3.19\|1037899\|33\|NZ_CP014982\|PILER-CR	1037899-1037931	33	MH370364	Salmonella phage S107, complete genome	29958-29990	7	0.788
NZ_CP014982_3	3.19\|1037899\|33\|NZ_CP014982\|PILER-CR	1037899-1037931	33	MH370382	Salmonella phage S135, complete genome	29958-29990	7	0.788
NZ_CP014982_3	3.19\|1037899\|33\|NZ_CP014982\|PILER-CR	1037899-1037931	33	MH370383	Salmonella phage S137, complete genome	29958-29990	7	0.788
NZ_CP014982_4	4.1\|1038248\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1038248-1038279	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	188177-188208	7	0.781
NZ_CP014982_4	4.1\|1038248\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1038248-1038279	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	192938-192969	7	0.781
NZ_CP014982_4	4.1\|1038248\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1038248-1038279	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	188204-188235	7	0.781
NZ_CP014982_2	2.4\|1019543\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019543-1019574	32	NC_028940	Pectobacterium bacteriophage PM2, complete genome	79087-79118	8	0.75
NZ_CP014982_2	2.5\|1019604\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019604-1019635	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	462005-462036	8	0.75
NZ_CP014982_2	2.14\|1020153\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020153-1020184	32	CP001770	Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence	145771-145802	8	0.75
NZ_CP014982_2	2.15\|1020214\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020214-1020245	32	LQ277707	Sequence 2 from Patent WO2016071503	12422-12453	8	0.75
NZ_CP014982_2	2.15\|1020214\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020214-1020245	32	LZ998055	JP 2017534684-A/2: Phage Therapy	12422-12453	8	0.75
NZ_CP014982_2	2.18\|1020397\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020397-1020428	32	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1098771-1098802	8	0.75
NZ_CP014982_2	2.18\|1020397\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020397-1020428	32	NZ_CP014128	Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence	160189-160220	8	0.75
NZ_CP014982_2	2.18\|1020397\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020397-1020428	32	NC_014561	Pantoea vagans C9-1 plasmid pPag1, complete sequence	156443-156474	8	0.75
NZ_CP014982_2	2.18\|1020397\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020397-1020428	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	137983-138014	8	0.75
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	43093-43124	8	0.75
NZ_CP014982_2	2.19\|1020458\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020458-1020489	32	NZ_CP053442	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence	152052-152083	8	0.75
NZ_CP014982_2	2.24\|1020767\|32\|NZ_CP014982\|PILER-CR	1020767-1020798	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
NZ_CP014982_2	2.24\|1020767\|32\|NZ_CP014982\|PILER-CR	1020767-1020798	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
NZ_CP014982_2	2.34\|1020764\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1020764-1020795	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
NZ_CP014982_2	2.34\|1020764\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1020764-1020795	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	MK531539	Acinetobacter baumannii strain MC23 plasmid pMC23.3, complete sequence	5832-5860	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP027187	Acinetobacter baumannii strain AR_0052 plasmid unnamed3, complete sequence	5974-6002	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP038649	Acinetobacter baumannii strain ACN21 plasmid unnamed5, complete sequence	2569-2597	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP033845	Klebsiella oxytoca strain FDAARGOS_500 plasmid unnamed1, complete sequence	4852-4880	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP018679	Acinetobacter baumannii strain LAC4 plasmid pALAC4-2, complete sequence	1401-1429	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP007714	Acinetobacter baumannii LAC-4 plasmid pABLAC2, complete sequence	792-820	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP041588	Acinetobacter baumannii strain J9 plasmid pJ9-1, complete sequence	1401-1429	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP038647	Acinetobacter baumannii strain ACN21 plasmid unnamed3, complete sequence	5809-5837	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP038650	Acinetobacter baumannii strain ACN21 plasmid unnamed6, complete sequence	1527-1555	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP038651	Acinetobacter baumannii strain ACN21 plasmid unnamed7, complete sequence	1662-1690	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP033770	Acinetobacter baumannii strain FDAARGOS_533 plasmid unnamed2, complete sequence	4577-4605	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NC_019311	Acinetobacter baumannii plasmid pRAY*-v1, complete sequence	1401-1429	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NC_019345	Acinetobacter baumannii plasmid pRAY*-v2, complete sequence	3756-3784	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NC_023280	Acinetobacter nosocomialis plasmid pRAY*-v3, complete sequence	1401-1429	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NC_000923	Acinetobacter sp. SUN resistance plasmid pRAY, complete genome	1400-1428	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP012954	Acinetobacter baumannii strain D36 plasmid pRAY* (pD36-2) clone GC1, complete sequence	1401-1429	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	CP033529	Acinetobacter pittii strain 2014N05-125 plasmid p2014N05-125-4, complete sequence	1580-1608	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP027181	Acinetobacter baumannii strain AR_0070 plasmid unnamed3, complete sequence	64-92	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	CP033564	Acinetobacter nosocomialis strain 2010S01-197 plasmid p2010S01-197-3, complete sequence	2581-2609	8	0.724
NZ_CP014982_3	3.1\|1037412\|29\|NZ_CP014982\|PILER-CR	1037412-1037440	29	NZ_CP033867	Acinetobacter sp. FDAARGOS_494 plasmid unnamed	320-348	8	0.724
NZ_CP014982_3	3.8\|1037717\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037717-1037748	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NZ_CP014982_3	3.15\|1037655\|33\|NZ_CP014982\|PILER-CR	1037655-1037687	33	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142293-142325	8	0.758
NZ_CP014982_3	3.15\|1037655\|33\|NZ_CP014982\|PILER-CR	1037655-1037687	33	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29080	8	0.758
NZ_CP014982_4	4.2\|1038309\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1038309-1038340	32	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	8862-8893	8	0.75
NZ_CP014982_4	4.2\|1038309\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1038309-1038340	32	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	151600-151631	8	0.75
NZ_CP014982_4	4.8\|1038675\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1038675-1038706	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
NZ_CP014982_2	2.7\|1019726\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019726-1019757	32	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	353298-353329	9	0.719
NZ_CP014982_2	2.7\|1019726\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019726-1019757	32	AM749121	Streptococcus phage M102 complete genome	7893-7924	9	0.719
NZ_CP014982_2	2.7\|1019726\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019726-1019757	32	NC_012884	Streptococcus phage M102, complete genome	7893-7924	9	0.719
NZ_CP014982_2	2.10\|1019909\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019909-1019940	32	MN693046	Marine virus AFVG_25M413, complete genome	4323-4354	9	0.719
NZ_CP014982_2	2.10\|1019909\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019909-1019940	32	MN693008	Marine virus AFVG_117M9, complete genome	4316-4347	9	0.719
NZ_CP014982_2	2.11\|1019970\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019970-1020001	32	DQ674738	Aeromonas phage phiO18P, complete genome	15707-15738	9	0.719
NZ_CP014982_2	2.11\|1019970\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019970-1020001	32	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	380725-380756	9	0.719
NZ_CP014982_2	2.11\|1019970\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019970-1020001	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	153785-153816	9	0.719
NZ_CP014982_2	2.12\|1020031\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020031-1020062	32	MN694645	Marine virus AFVG_250M761, complete genome	31050-31081	9	0.719
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	MN062720	Microbacterium phage FuzzBuster, complete genome	19374-19405	9	0.719
NZ_CP014982_2	2.18\|1020397\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020397-1020428	32	NZ_CP045722	Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence	332-363	9	0.719
NZ_CP014982_2	2.18\|1020397\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020397-1020428	32	NZ_CP022519	Pantoea vagans strain FBS135 plasmid pPant3, complete sequence	62976-63007	9	0.719
NZ_CP014982_2	2.18\|1020397\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020397-1020428	32	NZ_CP028351	Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence	144976-145007	9	0.719
NZ_CP014982_3	3.5\|1037534\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037534-1037565	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
NZ_CP014982_3	3.11\|1037900\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037900-1037931	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NZ_CP014982_2	2.4\|1019543\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019543-1019574	32	NZ_CP042995	Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence	68697-68728	10	0.688
NZ_CP014982_2	2.4\|1019543\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019543-1019574	32	NZ_CP026129	Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence	43950-43981	10	0.688
NZ_CP014982_2	2.4\|1019543\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019543-1019574	32	NZ_CP038501	Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence	49131-49162	10	0.688
NZ_CP014982_2	2.4\|1019543\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019543-1019574	32	NZ_CP046044	Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence	66631-66662	10	0.688
NZ_CP014982_2	2.4\|1019543\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019543-1019574	32	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	147167-147198	10	0.688
NZ_CP014982_2	2.8\|1019787\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019787-1019818	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1134787-1134818	10	0.688
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	NZ_CP019257	Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence	20006-20037	10	0.688
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	NZ_CP019274	Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence	9024-9055	10	0.688
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	NZ_CP019275	Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence	27130-27161	10	0.688
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	NZ_CP019279	Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence	19363-19394	10	0.688
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	23427-23458	10	0.688
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	NC_049342	Escherichia phage 500465-1, complete genome	24342-24373	10	0.688
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	KY271398	Klebsiella phage 4 LV-2017, complete genome	28240-28271	10	0.688
NZ_CP014982_2	2.13\|1020092\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1020092-1020123	32	CP025900	Escherichia phage sp., complete genome	24342-24373	10	0.688
NZ_CP014982_2	2.28\|1021011\|32\|NZ_CP014982\|PILER-CR	1021011-1021042	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
NZ_CP014982_2	2.38\|1021008\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1021008-1021039	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
NZ_CP014982_2	2.41\|1021191\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1021191-1021222	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
NZ_CP014982_3	3.5\|1037534\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037534-1037565	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
NZ_CP014982_3	3.5\|1037534\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037534-1037565	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
NZ_CP014982_3	3.5\|1037534\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037534-1037565	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
NZ_CP014982_3	3.5\|1037534\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037534-1037565	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
NZ_CP014982_3	3.5\|1037534\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1037534-1037565	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
NZ_CP014982_3	3.13\|1038022\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1038022-1038053	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
NZ_CP014982_4	4.9\|1038736\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1038736-1038767	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP014982_4	4.9\|1038736\|32\|NZ_CP014982\|CRISPRCasFinder,CRT	1038736-1038767	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NZ_CP014982_2	2.1\|1019360\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019360-1019391	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1885546-1885577	11	0.656
NZ_CP014982_2	2.1\|1019360\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019360-1019391	32	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	56201-56232	11	0.656
NZ_CP014982_2	2.1\|1019360\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019360-1019391	32	NZ_CP040822	Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence	83399-83430	11	0.656
NZ_CP014982_2	2.1\|1019360\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019360-1019391	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1487158-1487189	11	0.656
NZ_CP014982_2	2.1\|1019360\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019360-1019391	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	597699-597730	11	0.656
NZ_CP014982_2	2.11\|1019970\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019970-1020001	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	234768-234799	11	0.656
NZ_CP014982_2	2.11\|1019970\|32\|NZ_CP014982\|PILER-CR,CRISPRCasFinder,CRT	1019970-1020001	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	299431-299462	11	0.656

1. spacer 2.27|1020950|32|NZ_CP014982|PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

2. spacer 2.27|1020950|32|NZ_CP014982|PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

3. spacer 2.37|1020947|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

4. spacer 2.37|1020947|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

5. spacer 3.13|1038022|32|NZ_CP014982|CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ccacgttcggcgatgttggccccatcggtccg	Protospacer
*******************************.

6. spacer 3.13|1038022|32|NZ_CP014982|CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ccacattcggcgatgttggccccatcggtcca	Protospacer
****.***************************

7. spacer 3.21|1038021|33|NZ_CP014982|PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.97

gccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
gccacgttcggcgatgttggccccatcggtccg	Protospacer
********************************.

8. spacer 3.21|1038021|33|NZ_CP014982|PILER-CR matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.97

gccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
gccacattcggcgatgttggccccatcggtcca	Protospacer
*****.***************************

9. spacer 2.31|1020580|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 2, identity: 0.938

aaacgaaagaggctatgcggttgtttatcggt	CRISPR spacer
aaacgaaagaggccatgcgattgtttatcggt	Protospacer
*************.*****.************

10. spacer 3.13|1038022|32|NZ_CP014982|CRISPRCasFinder,CRT matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ctacgttcggtgatgttggccccataggtcca	Protospacer
*.********.************** ******

11. spacer 2.21|1020580|35|NZ_CP014982|PILER-CR matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 4, identity: 0.886

tcgaaacgaaagaggctatgcggttgtttatcggt	CRISPR spacer
atgaaacgaaagaggccatgcgattgtttatcggt	Protospacer
 .**************.*****.************

12. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

13. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

14. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

15. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.812

gatcgggtggtgccggtgggccatgtggcgct--	CRISPR spacer
ggtcgggtggtgcgggtcggcca--tggcgttgg	Protospacer
*.*********** *** *****  *****.*

16. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

17. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

18. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

19. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

20. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

21. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

22. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

23. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

24. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

25. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

26. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

27. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

28. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

29. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

30. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

31. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

32. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

33. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

34. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

35. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

36. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

37. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

ttgacggtgacgtcagtgccgaa--ggcgaaata	CRISPR spacer
atgacggtgacgtcggagccgaagcggcggaa--	Protospacer
 *************.* ******  ****.**

38. spacer 3.11|1037900|32|NZ_CP014982|CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgg	Protospacer
 .  **********************  ****

39. spacer 3.19|1037899|33|NZ_CP014982|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.818

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgg	Protospacer
* .  **********************  ****

40. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044078 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg--ggtggtgccggtgggccatgtggcgct	CRISPR spacer
--ccgacgctggtggcggtgggccatgtggcggc	Protospacer
  .**  * ***** ***************** .

41. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg--ggtggtgccggtgggccatgtggcgct	CRISPR spacer
--ccgacgctggtggcggtgggccatgtggcggc	Protospacer
  .**  * ***** ***************** .

42. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

43. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

44. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

45. spacer 2.6|1019665|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

gatcgggtggtgccggtgggccatgtggcgct	CRISPR spacer
gctagtgccgtgccggtgcgccatgtggggct	Protospacer
* * * *. ********* ********* ***

46. spacer 2.11|1019970|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*

47. spacer 2.11|1019970|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcaccgccgatcctttcaccgccgcc	Protospacer
********* ********* ****. *.  **

48. spacer 2.11|1019970|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*

49. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
tcttcggtgacgacattgccgaaggcgacgta	Protospacer
*.  ******** ** ************ .**

50. spacer 3.7|1037656|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

ttacgtgtttattcatctgttgcattagattc	CRISPR spacer
attggtgtttcttcatctattgcattagaagc	Protospacer
 *  ****** *******.**********  *

51. spacer 3.7|1037656|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

ttacgtgtttattcatctgttgcattagattc	CRISPR spacer
attggtgtttcttcatctattgcattagaagc	Protospacer
 *  ****** *******.**********  *

52. spacer 3.9|1037778|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acgccccgaatgtgtttgcctcgcccgctgcc	CRISPR spacer
gcgacctgaatgtgtttgcctcgcgccgtggc	Protospacer
.** **.***************** *  ** *

53. spacer 3.11|1037900|32|NZ_CP014982|CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

54. spacer 3.11|1037900|32|NZ_CP014982|CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

55. spacer 3.11|1037900|32|NZ_CP014982|CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

56. spacer 3.11|1037900|32|NZ_CP014982|CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

57. spacer 3.19|1037899|33|NZ_CP014982|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.788

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

58. spacer 3.19|1037899|33|NZ_CP014982|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.788

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

59. spacer 3.19|1037899|33|NZ_CP014982|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.788

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

60. spacer 3.19|1037899|33|NZ_CP014982|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.788

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

61. spacer 4.1|1038248|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

62. spacer 4.1|1038248|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

63. spacer 4.1|1038248|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

64. spacer 2.4|1019543|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_028940 (Pectobacterium bacteriophage PM2, complete genome) position: , mismatch: 8, identity: 0.75

gctcattaaataactatataacccccggactc	CRISPR spacer
tatcattaaataactatataacacacgagagc	Protospacer
  ******************** * **..  *

65. spacer 2.5|1019604|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ttccagaaccgtttgacttactgtggccatta	CRISPR spacer
ctgccgaaccgtgtgccttactgtggccaccg	Protospacer
.* * ******* ** *************...

66. spacer 2.14|1020153|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 8, identity: 0.75

cggaggatggaatatttccgaggctggcgatt	CRISPR spacer
tgggagatggaatacttccggggctggcaacc	Protospacer
.**..*********.*****.*******.*..

67. spacer 2.15|1020214|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to LQ277707 (Sequence 2 from Patent WO2016071503) position: , mismatch: 8, identity: 0.75

atgccggaacgctgatggcgtttgacatgagc----	CRISPR spacer
ttgccggaacgctattggcgtttg----cagccttt	Protospacer
 ************. *********     ***

68. spacer 2.15|1020214|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to LZ998055 (JP 2017534684-A/2: Phage Therapy) position: , mismatch: 8, identity: 0.75

atgccggaacgctgatggcgtttgacatgagc----	CRISPR spacer
ttgccggaacgctattggcgtttg----cagccttt	Protospacer
 ************. *********     ***

69. spacer 2.18|1020397|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 8, identity: 0.75

tgacgctggtctataccggcaacgaacgcgac-	CRISPR spacer
atacgctggtctataccggcaa-ggatccgctg	Protospacer
  ******************** *.*. ** .

70. spacer 2.18|1020397|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014128 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacactggtctacaccggcaacgtaaaattc	Protospacer
****.********.********** * .   *

71. spacer 2.18|1020397|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_014561 (Pantoea vagans C9-1 plasmid pPag1, complete sequence) position: , mismatch: 8, identity: 0.75

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacactggtctacaccggcaacgtaaaattc	Protospacer
****.********.********** * .   *

72. spacer 2.18|1020397|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.75

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
ggacgctgttcaataccggcaacgtccggatc	Protospacer
 ******* ** ************  ** . *

73. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
tcgacggtgacgtccgtgacgaaggtgttcga	Protospacer
*.************ *** ******.*    *

74. spacer 2.19|1020458|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtgacgtcagtgccgaaggcgaaata	CRISPR spacer
ttctggtggacgtccgtgccgaaggcgcaatg	Protospacer
**   *  ****** ************ ***.

75. spacer 2.24|1020767|32|NZ_CP014982|PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
attcactatcagacattttattcagttctgcc	Protospacer
  ***** ** *****************  .

76. spacer 2.24|1020767|32|NZ_CP014982|PILER-CR matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
cgcgcgtgtctgacattgtattcagttcattt	Protospacer
**.   * ********* **********.**

77. spacer 2.34|1020764|32|NZ_CP014982|CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
attcactatcagacattttattcagttctgcc	Protospacer
  ***** ** *****************  .

78. spacer 2.34|1020764|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
cgcgcgtgtctgacattgtattcagttcattt	Protospacer
**.   * ********* **********.**

79. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to MK531539 (Acinetobacter baumannii strain MC23 plasmid pMC23.3, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

80. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP027187 (Acinetobacter baumannii strain AR_0052 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

81. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP038649 (Acinetobacter baumannii strain ACN21 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

82. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP033845 (Klebsiella oxytoca strain FDAARGOS_500 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

83. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP018679 (Acinetobacter baumannii strain LAC4 plasmid pALAC4-2, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

84. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP007714 (Acinetobacter baumannii LAC-4 plasmid pABLAC2, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

85. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP041588 (Acinetobacter baumannii strain J9 plasmid pJ9-1, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

86. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP038647 (Acinetobacter baumannii strain ACN21 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

87. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP038650 (Acinetobacter baumannii strain ACN21 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

88. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP038651 (Acinetobacter baumannii strain ACN21 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

89. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP033770 (Acinetobacter baumannii strain FDAARGOS_533 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

90. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NC_019311 (Acinetobacter baumannii plasmid pRAY*-v1, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

91. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NC_019345 (Acinetobacter baumannii plasmid pRAY*-v2, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

92. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NC_023280 (Acinetobacter nosocomialis plasmid pRAY*-v3, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

93. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NC_000923 (Acinetobacter sp. SUN resistance plasmid pRAY, complete genome) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

94. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP012954 (Acinetobacter baumannii strain D36 plasmid pRAY* (pD36-2) clone GC1, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

95. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to CP033529 (Acinetobacter pittii strain 2014N05-125 plasmid p2014N05-125-4, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

96. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP027181 (Acinetobacter baumannii strain AR_0070 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

97. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to CP033564 (Acinetobacter nosocomialis strain 2010S01-197 plasmid p2010S01-197-3, complete sequence) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

98. spacer 3.1|1037412|29|NZ_CP014982|PILER-CR matches to NZ_CP033867 (Acinetobacter sp. FDAARGOS_494 plasmid unnamed) position: , mismatch: 8, identity: 0.724

tgagcaacgacagtaaataatttttcgtg	CRISPR spacer
aatacaacgacagtaaataaattttgtta	Protospacer
 . .**************** ****  *.

99. spacer 3.8|1037717|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gaggcgtac-----aggctgttagatgagaaattacc	CRISPR spacer
-----atactaataaggctgtttgatgcgaaattacc	Protospacer
     .***     ******** **** *********

100. spacer 3.15|1037655|33|NZ_CP014982|PILER-CR matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758

gttacgtgtttattcatctgttgcattagattc	CRISPR spacer
aattggtgtttcttcatctattgcattagaagc	Protospacer
. *  ****** *******.**********  *

101. spacer 3.15|1037655|33|NZ_CP014982|PILER-CR matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 8, identity: 0.758

gttacgtgtttattcatctgttgcattagattc	CRISPR spacer
aattggtgtttcttcatctattgcattagaagc	Protospacer
. *  ****** *******.**********  *

102. spacer 4.2|1038309|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

ttcttgaatatgattgcgggtatatgtggata	CRISPR spacer
ctcttgaatatgattgcgggtttagatttacc	Protospacer
.******************** ** .*  *.

103. spacer 4.2|1038309|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcttgaatatgattgcgggtatatgtggata	CRISPR spacer
ctcttgaatatgattgcgggtttagatttacc	Protospacer
.******************** ** .*  *.

104. spacer 4.8|1038675|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

ggttaaccaggggtttttccccactatttcgc	CRISPR spacer
aggtaacgaggggtttttccccaatattgaaa	Protospacer
.* **** *************** ****  .

105. spacer 2.7|1019726|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
ggtgcgggtgaggaactcctcgtccactgaac	Protospacer
*  **** **** **************   .

106. spacer 2.7|1019726|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
aaggcggtggagtaactcctggtccagcccaa	Protospacer
. .***** *********** *****  .*.*

107. spacer 2.7|1019726|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
aaggcggtggagtaactcctggtccagcccaa	Protospacer
. .***** *********** *****  .*.*

108. spacer 2.10|1019909|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

gcgaggtcaataaaaaatggtgtggctttacc	CRISPR spacer
ttagggtcaacaaaaaatggtgtggtttcaga	Protospacer
 ...******.**************.**.*

109. spacer 2.10|1019909|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

gcgaggtcaataaaaaatggtgtggctttacc	CRISPR spacer
ttagggtcaacaaaaaatggtgtggtttcaga	Protospacer
 ...******.**************.**.*

110. spacer 2.11|1019970|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcagcgccgagcagttcagcaaactg	Protospacer
**************** * *****  . .*.

111. spacer 2.11|1019970|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
gcggcatcagcgccgaccggttcaccgtcagg	Protospacer
 ***************.* *****. **

112. spacer 2.11|1019970|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatgagcgccgatcagttcgacgccctg	Protospacer
******* ********** ****.  *. *.

113. spacer 2.12|1020031|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

aacaggaacaggaaaaaaaagatttgtccggt	CRISPR spacer
tacagtaacaggaaaaaaaggattaatgatgc	Protospacer
 **** *************.**** .*   *.

114. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaacggtcagcctgtccaggagga	Protospacer
****** *********** ****..**

115. spacer 2.18|1020397|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045722 (Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacgctgatctataccggcaacgtcaagttt	Protospacer
********.***************   .   .

116. spacer 2.18|1020397|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022519 (Pantoea vagans strain FBS135 plasmid pPant3, complete sequence) position: , mismatch: 9, identity: 0.719

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacgctgatctataccggcaacgtcaagttt	Protospacer
********.***************   .   .

117. spacer 2.18|1020397|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028351 (Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence) position: , mismatch: 9, identity: 0.719

tgacgctggtctataccggcaacgaacgcgac	CRISPR spacer
tgacactggtctacaccggcaacgtaaaattt	Protospacer
****.********.********** * .   .

118. spacer 3.5|1037534|32|NZ_CP014982|CRISPRCasFinder,CRT matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

ttgcag----ggcgatattgttgttggtgaatggga	CRISPR spacer
----aacactgacgatattattgttggtgattgggg	Protospacer
    *.    *.*******.********** ****.

119. spacer 3.11|1037900|32|NZ_CP014982|CRISPRCasFinder,CRT matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
tgagttcatccggcactaccggcgctggatgc	Protospacer
   ******* ************.**   **

120. spacer 2.4|1019543|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042995 (Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

121. spacer 2.4|1019543|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026129 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

122. spacer 2.4|1019543|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038501 (Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

123. spacer 2.4|1019543|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046044 (Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

124. spacer 2.4|1019543|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

125. spacer 2.8|1019787|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 10, identity: 0.688

ctccagcgctcgaatttatttgaggccaccac	CRISPR spacer
gaacaccgcgcgaatttatttgaggcaagttt	Protospacer
   ** *** **************** * . .

126. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

127. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

128. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

129. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

130. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

131. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

132. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

133. spacer 2.13|1020092|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 10, identity: 0.688

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

134. spacer 2.28|1021011|32|NZ_CP014982|PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgatcgagagtgcgaagaggcagaacgggca	CRISPR spacer
gaaggtggcagtgccaagagacagaacgggca	Protospacer
  .. .*. ***** *****.***********

135. spacer 2.38|1021008|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgatcgagagtgcgaagaggcagaacgggca	CRISPR spacer
gaaggtggcagtgccaagagacagaacgggca	Protospacer
  .. .*. ***** *****.***********

136. spacer 2.41|1021191|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*

137. spacer 3.5|1037534|32|NZ_CP014982|CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

138. spacer 3.5|1037534|32|NZ_CP014982|CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

139. spacer 3.5|1037534|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

140. spacer 3.5|1037534|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

141. spacer 3.5|1037534|32|NZ_CP014982|CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

142. spacer 3.13|1038022|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
actcgttcggcgatgtggcccccatccaggtg	Protospacer
 * ************* * ******* .  ..

143. spacer 4.9|1038736|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

144. spacer 4.9|1038736|32|NZ_CP014982|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

145. spacer 2.1|1019360|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 11, identity: 0.656

tttgccgatccccttccagaccaccctttaca	CRISPR spacer
cgacgagatcgccttccagaccaaccttttgg	Protospacer
.     **** ************ *****  .

146. spacer 2.1|1019360|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 11, identity: 0.656

tttgccgatccccttccagaccaccctttaca	CRISPR spacer
cgacgagatcgccttccagaccaaccttttgg	Protospacer
.     **** ************ *****  .

147. spacer 2.1|1019360|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040822 (Paraoceanicella profunda strain D4M1 plasmid pD4M1D, complete sequence) position: , mismatch: 11, identity: 0.656

tttgccgatccccttccagaccaccctttaca	CRISPR spacer
cgactcgatcgccttccagaccaaccttctgg	Protospacer
.   .***** ************ ****.  .

148. spacer 2.1|1019360|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 11, identity: 0.656

tttgccgatccccttccagaccaccctttaca	CRISPR spacer
cgacgagatcgccttccagaccaaccttttgg	Protospacer
.     **** ************ *****  .

149. spacer 2.1|1019360|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 11, identity: 0.656

tttgccgatccccttccagaccaccctttaca	CRISPR spacer
cgacgagatcgccttccagaccaaccttttgg	Protospacer
.     **** ************ *****  .

150. spacer 2.11|1019970|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

151. spacer 2.11|1019970|32|NZ_CP014982|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

687152 : 743497

Escherichia_phage(30.43%)

lysis,head,terminase,plate,tRNA,integrase,holin,portal,tail,capsid

attL 700181:700196|attR 729898:729913

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000785626.1\|687152_687551_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_000031219.1\|687553_687859_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_000877297.1\|687900_688269_-	DUF1090 domain-containing protein	NA	NA	NA	NA
WP_000917516.1\|688413_688797_-	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA
WP_000422143.1\|688800_689463_-	DedA family protein	NA	NA	NA	NA
WP_000235363.1\|689912_691157_-	serine/threonine transporter SstT	NA	NA	NA	NA
WP_001098833.1\|691411_692380_-	TerC family protein	I7HPH5	Enterobacteria_phage	5.0e-39	34.9
WP_000617687.1\|692651_693650_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000951049.1\|693738_694431_-	vancomycin high temperature exclusion protein	NA	NA	NA	NA
WP_000202966.1\|694582_695080_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_000019989.1\|695165_696302_+	23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA	NA	NA	NA
WP_000121523.1\|696382_698401_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_001520281.1\|698571_699951_-	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	2.9e-32	29.0
700181:700196	attL	NA	NA	NA	NA
WP_000094651.1\|700380_701901_+	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	6.4e-33	48.5
WP_000478472.1\|702288_703854_+	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-12	33.9
WP_000983441.1\|703850_704498_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000213760.1\|704729_705497_+	siderophore-interacting protein	NA	NA	NA	NA
WP_023972640.1\|707126_708134_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	3.1e-193	98.5
WP_023972639.1\|708133_708709_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	6.8e-68	65.4
WP_023972638.1\|708841_709117_+	hypothetical protein	A0A218M4I5	Erwinia_phage	4.5e-38	89.4
WP_023972637.1\|709137_709647_+	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	1.4e-88	97.6
WP_000920168.1\|709654_709882_+	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	2.1e-36	97.3
WP_000085639.1\|709868_710069_+	hypothetical protein	A0A0M5M7U3	Salmonella_phage	2.3e-31	98.5
WP_001246237.1\|710138_710366_+	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	6.8e-32	100.0
WP_023972636.1\|710365_710590_+	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	4.2e-34	98.6
WP_153259982.1\|710611_711205_-	hypothetical protein	NA	NA	NA	NA
WP_077910960.1\|711203_713450_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	93.9
WP_023972634.1\|713568_714009_+	DinI family protein	A0A218M4I0	Erwinia_phage	1.9e-70	100.0
WP_001524927.1\|714090_714822_+	hypothetical protein	Q37850	Escherichia_phage	4.3e-128	94.2
WP_001524894.1\|714981_715917_+	hypothetical protein	NA	NA	NA	NA
WP_023972633.1\|716263_717286_-\|portal	phage portal protein	A0A2I8TV74	Erwinia_phage	3.6e-197	99.1
WP_023972632.1\|717282_718029_-	hypothetical protein	O80303	Escherichia_phage	8.1e-138	95.2
WP_023972631.1\|718028_719798_-\|terminase	terminase ATPase subunit family protein	S4TT96	Salmonella_phage	0.0e+00	98.6
WP_023972630.1\|719929_720817_+\|capsid	capsid scaffolding protein	A0A0M3UL81	Salmonella_phage	8.1e-129	89.0
WP_001247243.1\|720893_721961_+\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	1.2e-198	99.7
WP_023972629.1\|721964_722714_+\|terminase	terminase endonuclease subunit	Q6K1I5	Salmonella_virus	7.6e-128	97.6
WP_023972628.1\|722807_723314_+\|head	head completion/stabilization protein	O80306	Escherichia_phage	4.7e-89	98.2
WP_023972627.1\|723313_723517_+\|tail	tail protein X	A0A0M3ULF4	Salmonella_phage	3.0e-31	97.0
WP_000134660.1\|723520_723817_+\|holin	phage holin family protein	Q6K1I2	Salmonella_virus	5.8e-47	100.0
WP_023972626.1\|723803_724301_+	glycoside hydrolase family 104 protein	S4TUB1	Salmonella_phage	2.2e-91	96.4
WP_023972625.1\|724297_724711_+\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	5.2e-62	94.2
WP_001384078.1\|724682_724856_+	hypothetical protein	O80311	Escherichia_phage	6.2e-25	98.2
WP_023972624.1\|724818_725286_+\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	1.0e-82	98.1
WP_023140001.1\|725278_725728_+	phage virion morphogenesis protein	O80313	Escherichia_phage	2.5e-70	96.0
WP_023972623.1\|725796_726438_+\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	2.5e-111	96.2
WP_023972622.1\|726434_726782_+	GPW/gp25 family protein	A0A0M4RE59	Salmonella_phage	8.8e-55	95.7
WP_001550204.1\|726788_727697_+\|plate	baseplate assembly protein	Q37840	Escherichia_phage	6.8e-155	95.7
WP_023972621.1\|727689_728223_+\|tail	phage tail protein I	Q37841	Escherichia_phage	7.9e-95	93.1
WP_015406363.1\|728229_729870_+\|tail	phage tail protein	Q37842	Escherichia_phage	4.6e-101	61.1
WP_023972620.1\|729876_730278_+\|tail	tail fiber assembly protein	A0A1B0V844	Salmonella_phage	4.1e-56	81.8
729898:729913	attR	NA	NA	NA	NA
WP_063328694.1\|730412_731600_+\|tail	phage tail sheath protein	Q6K1H0	Salmonella_virus	2.9e-222	99.5
WP_001550210.1\|731615_732137_+\|tail	phage major tail tube protein	Q37845	Escherichia_phage	1.7e-94	100.0
WP_023972619.1\|732199_732535_+\|tail	phage tail assembly protein	Q37846	Escherichia_phage	1.5e-51	97.3
WP_000763323.1\|732567_732687_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.4e-15	100.0
WP_023972618.1\|732679_735121_+\|tail	phage tail tape measure protein	Q37848	Escherichia_phage	0.0e+00	87.2
WP_023972617.1\|735136_735622_+\|tail	phage tail protein	O80317	Escherichia_phage	3.8e-80	93.8
WP_023972616.1\|735618_736788_+	phage late control D family protein	Q6K1G4	Salmonella_virus	1.4e-205	94.8
WP_023135249.1\|736855_737074_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	4.3e-39	100.0
WP_000237776.1\|737432_737939_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_001519776.1\|738062_739910_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_000918865.1\|740059_741805_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
WP_001144069.1\|742040_742256_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_001264394.1\|742483_743497_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-109	59.5

DBSCAN-SWA_2

1292582 : 1369327

Salmonella_phage(37.5%)

lysis,head,capsid,terminase,tRNA,transposase,integrase,holin,protease,tail,portal

attL 1284663:1284679|attR 1375174:1375190

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1284663:1284679	attL	NA	NA	NA	NA
WP_000997368.1\|1292582_1293620_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_000179978.1\|1293735_1294425_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
WP_000627811.1\|1294743_1295127_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000188414.1\|1295188_1295776_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_001526875.1\|1295878_1296778_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000083343.1\|1298259_1298997_+\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000989177.1\|1298981_1300604_-	L-aspartate oxidase	NA	NA	NA	NA
WP_014344135.1\|1300867_1301032_+	rpoE leader peptide RseD	NA	NA	NA	NA
WP_000003307.1\|1301028_1301604_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_001168374.1\|1301635_1302286_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_000812017.1\|1302285_1303242_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_000589087.1\|1303238_1303718_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_001007939.1\|1304215_1305445_+\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	2.9e-233	94.4
WP_001670787.1\|1305422_1305707_-	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
WP_001237031.1\|1305747_1305987_-	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_077248255.1\|1306029_1307187_-	recombinase RecT	S4TTE8	Salmonella_phage	3.9e-216	99.5
WP_000017125.1\|1307149_1310077_-	PD-(D/E)XK nuclease-like domain-containing protein	S4TNL0	Salmonella_phage	0.0e+00	99.3
WP_001539619.1\|1310203_1310554_-	hypothetical protein	S4TSN6	Salmonella_phage	1.1e-60	97.4
WP_000917562.1\|1310575_1310734_-	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
WP_000950426.1\|1311190_1311853_-	hypothetical protein	NA	NA	NA	NA
WP_000356948.1\|1311852_1312239_-	hypothetical protein	NA	NA	NA	NA
WP_001111772.1\|1312231_1313071_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.5e-31	33.3
WP_023972744.1\|1313129_1313525_-	helix-turn-helix domain-containing protein	K7PM35	Enterobacteria_phage	2.5e-37	61.4
WP_000643689.1\|1313624_1313867_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	2.1e-23	64.1
WP_010835408.1\|1313826_1314201_+	hypothetical protein	S4TTD7	Salmonella_phage	1.9e-63	98.4
WP_023972743.1\|1314292_1315153_+	replication protein	K7PGT1	Enterobacteria_phage	1.5e-47	48.5
WP_000801764.1\|1315149_1315845_+	hypothetical protein	G8C7U6	Escherichia_phage	2.1e-55	45.4
WP_000664368.1\|1315858_1316557_+	DUF550 domain-containing protein	A0A0M4RTV1	Salmonella_phage	2.1e-63	85.7
WP_000877757.1\|1316664_1317297_+	hypothetical protein	NA	NA	NA	NA
WP_001217669.1\|1317539_1317773_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_014343878.1\|1317889_1318138_+	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
WP_000929791.1\|1318172_1318775_+	DUF1367 family protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
WP_001096550.1\|1318983_1319595_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
WP_000801757.1\|1319591_1319732_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
WP_001097241.1\|1319728_1320406_+	antitermination protein	I6PDF8	Cronobacter_phage	7.7e-63	54.0
WP_000211410.1\|1320678_1321242_+	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
WP_000657897.1\|1321748_1321937_+	hypothetical protein	NA	NA	NA	NA
WP_001110783.1\|1322151_1322838_-\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	9.4e-133	100.0
WP_001574216.1\|1323113_1323443_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_000984581.1\|1323426_1323879_+	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
WP_001533543.1\|1323896_1324349_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
WP_000669690.1\|1324584_1324986_-	PPC domain-containing protein	NA	NA	NA	NA
WP_001102153.1\|1325272_1325818_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_000623091.1\|1325789_1327721_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
WP_000201415.1\|1327704_1327908_+	gpW family protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
WP_000831821.1\|1327904_1329485_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
WP_001189503.1\|1329474_1330971_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
WP_000011260.1\|1330983_1331331_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
WP_000522566.1\|1331385_1332414_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
WP_000201486.1\|1332471_1332831_+	DNA-packaging protein FI	NA	NA	NA	NA
WP_000083294.1\|1332841_1333225_+\|head,tail	head-tail joining protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
WP_000677089.1\|1333252_1333831_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000817263.1\|1333879_1335010_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	9.2e-218	100.0
WP_000033885.1\|1335118_1335520_+\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
WP_000971954.1\|1335527_1336274_+	Ig-like domain-containing protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
WP_000479607.1\|1336324_1336720_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_010989052.1\|1336716_1337055_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000372072.1\|1337026_1340122_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	6.1e-280	62.3
WP_000447369.1\|1340124_1340454_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
WP_001152689.1\|1340463_1341162_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
WP_000662739.1\|1341168_1341906_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
WP_000246126.1\|1341803_1342451_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
WP_000514917.1\|1342512_1345875_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
WP_000178853.1\|1345913_1346156_+	hypothetical protein	NA	NA	NA	NA
WP_001144691.1\|1346209_1348582_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0K2FIZ6	Escherichia_phage	1.1e-90	65.6
WP_000593433.1\|1348578_1349403_+	macro domain-containing protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
WP_000143154.1\|1349392_1349971_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
WP_010989049.1\|1350067_1350295_-	phage virulence factor PagK family protein	NA	NA	NA	NA
WP_001738443.1\|1350401_1350614_+	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
WP_001526383.1\|1351366_1351486_+\|transposase	transposase	NA	NA	NA	NA
WP_001542312.1\|1352198_1352336_-	hypothetical protein	NA	NA	NA	NA
WP_165418335.1\|1352340_1352478_-	hypothetical protein	NA	NA	NA	NA
WP_010989047.1\|1352850_1354344_-	type III secretion effector GogB	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
WP_000790154.1\|1354748_1356548_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
WP_000002559.1\|1356564_1357539_+	signal peptidase I	NA	NA	NA	NA
WP_045721070.1\|1357812_1358499_+	ribonuclease III	A0A2K9L5P0	Tupanvirus	5.7e-21	31.8
WP_000102232.1\|1358488_1359394_+	GTPase Era	NA	NA	NA	NA
WP_000399380.1\|1359405_1360134_+	DNA repair protein RecO	NA	NA	NA	NA
WP_000818972.1\|1360145_1360877_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_000986043.1\|1360876_1361257_+	holo-ACP synthase	NA	NA	NA	NA
WP_001196290.1\|1361368_1361629_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	52.3
WP_001022463.1\|1361666_1362593_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
WP_001276370.1\|1362708_1363905_+	OFA family MFS transporter	NA	NA	NA	NA
WP_000684022.1\|1363926_1364844_+	oxidoreductase	NA	NA	NA	NA
WP_000995703.1\|1364882_1365731_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_001048530.1\|1365846_1366740_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_000361663.1\|1366750_1368112_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_000253558.1\|1368115_1368751_+	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_001134566.1\|1368775_1369327_+\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
1375174:1375190	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1722773 : 1752356

Enterobacteria_phage(30.0%)

holin,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000781589.1\|1722773_1723268_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_000228070.1\|1723681_1724173_+	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_001260058.1\|1724162_1724426_+	chaperone NapD	NA	NA	NA	NA
WP_000778094.1\|1724422_1726909_+	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_000091673.1\|1726915_1727611_+	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_000013529.1\|1727597_1728467_+	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_000835182.1\|1728582_1729032_+	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_023972899.1\|1729041_1729644_+	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_000990028.1\|1730277_1730937_+	heme exporter protein CcmB	NA	NA	NA	NA
WP_000266008.1\|1730988_1731726_+	heme ABC transporter permease	NA	NA	NA	NA
WP_000074110.1\|1731722_1731935_+	heme exporter protein CcmD	NA	NA	NA	NA
WP_023972757.1\|1731931_1732411_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_000982518.1\|1732407_1734339_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_000828296.1\|1734335_1734893_+	thiol:disulfide interchange protein DsbE	NA	NA	NA	NA
WP_001238333.1\|1734889_1735933_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_001115498.1\|1735976_1736624_-	nitrate/nitrite response regulator protein NarP	NA	NA	NA	NA
WP_000281877.1\|1737353_1737917_+	acyloxyacyl hydrolase	NA	NA	NA	NA
WP_001653202.1\|1738108_1738312_-	virulence protein MsgA	NA	NA	NA	NA
WP_000624225.1\|1738614_1739406_+\|tail	tail fiber protein	Q1MVL8	Enterobacteria_phage	1.7e-48	31.6
WP_001113462.1\|1739701_1739905_+\|tail	tail protein	NA	NA	NA	NA
WP_023972657.1\|1740073_1742440_+	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7
WP_010989045.1\|1743771_1744140_+	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
WP_000894640.1\|1744168_1745500_-	AAA family ATPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
WP_001120499.1\|1745796_1746126_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
WP_023972659.1\|1746718_1747960_+	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
WP_023972660.1\|1747962_1748490_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	4.1e-11	31.3
WP_000022213.1\|1748867_1749311_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
WP_000884778.1\|1751534_1751825_-	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
WP_000806401.1\|1751852_1752356_+	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3

DBSCAN-SWA_4

1824406 : 1833577

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1824406_1825354_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
WP_000824855.1\|1825337_1826069_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1826049_1826157_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1826216_1826948_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272845.1\|1827170_1828856_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
WP_000598637.1\|1828852_1829572_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1829618_1830086_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_001197952.1\|1830142_1830673_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1830844_1831303_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_000195332.1\|1831543_1833577_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_5

1901885 : 1912391

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001111841.1\|1901885_1903289_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	27.1
WP_000981469.1\|1903466_1904360_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697840.1\|1904736_1905822_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
WP_001023662.1\|1905821_1906721_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000857529.1\|1906768_1907647_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-109	65.5
WP_000973708.1\|1907647_1908199_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
WP_000018226.1\|1908204_1909197_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000648784.1\|1909193_1909967_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000565905.1\|1909971_1911051_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
WP_000126349.1\|1911077_1912391_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_6

1999162 : 2049911

Salmonella_phage(90.48%)

lysis,head,terminase,plate,protease,integrase,holin,portal,tail,capsid

attL 1992963:1992977|attR 2010215:2010229

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1992963:1992977	attL	NA	NA	NA	NA
WP_001219015.1\|1999162_1999636_-	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
WP_000598920.1\|2000945_2001743_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_186246704.1\|2002034_2002850_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.2e-157	99.3
WP_001527041.1\|2003024_2003252_-	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	3.2e-37	100.0
WP_001061334.1\|2003291_2003861_-	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	7.1e-110	100.0
WP_000208068.1\|2003864_2004698_-	hypothetical protein	Q8HAA7	Salmonella_phage	4.7e-163	100.0
WP_000065095.1\|2004694_2005312_-	ead/Ea22-like family protein	Q8HAA6	Salmonella_phage	2.6e-113	100.0
WP_000071070.1\|2005308_2005824_-	DUF262 domain-containing protein	Q8HAA5	Salmonella_phage	7.4e-98	100.0
WP_000764235.1\|2005820_2006051_-	hypothetical protein	Q8HAA4	Salmonella_phage	2.0e-34	100.0
WP_000008351.1\|2006121_2006661_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
WP_000080415.1\|2006797_2007625_-	DUF2303 family protein	Q8HAA2	Salmonella_phage	7.5e-153	100.0
WP_000997190.1\|2007682_2008054_-	hypothetical protein	Q8HAA1	Salmonella_phage	1.1e-63	100.0
WP_001020636.1\|2008868_2009564_-	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-128	100.0
WP_001191666.1\|2009661_2009886_+	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
WP_000509731.1\|2009914_2010469_+	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
2010215:2010229	attR	NA	NA	NA	NA
WP_001087402.1\|2010465_2011623_+	Rha family phage regulatory protein	Q8HA97	Salmonella_phage	4.2e-218	100.0
WP_000620702.1\|2011619_2011844_+	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
WP_000061500.1\|2011840_2012659_+	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	2.8e-136	100.0
WP_001684745.1\|2012660_2013143_+	PerC family transcriptional regulator	Q8HA95	Salmonella_phage	1.1e-87	100.0
WP_000066908.1\|2013142_2014036_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	7.6e-175	100.0
WP_001241579.1\|2014032_2014422_+	RusA family crossover junction endodeoxyribonuclease	Q8HA93	Salmonella_phage	3.7e-70	100.0
WP_001061457.1\|2014438_2015299_+	KilA-N domain-containing protein	Q8HA92	Salmonella_phage	2.9e-163	100.0
WP_001202277.1\|2015306_2016296_+	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	4.9e-191	97.6
WP_000188927.1\|2016306_2016930_+	hypothetical protein	Q8HA89	Salmonella_phage	9.1e-119	100.0
WP_001527054.1\|2017062_2017320_+	hypothetical protein	Q8HA88	Salmonella_phage	5.2e-44	100.0
WP_014343859.1\|2017249_2017684_-	hypothetical protein	NA	NA	NA	NA
WP_001527046.1\|2017845_2018190_+\|holin	phage holin, lambda family	Q8HA87	Salmonella_phage	5.3e-44	100.0
WP_001005901.1\|2018192_2018807_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	9.3e-116	100.0
WP_001050825.1\|2018803_2019289_+\|lysis	lysis protein	Q8HA85	Salmonella_phage	5.9e-81	100.0
WP_000877027.1\|2019501_2019921_+	KilA-N domain-containing protein	Q8HA84	Salmonella_phage	4.8e-71	100.0
WP_001292890.1\|2020140_2020443_+	hypothetical protein	Q8HA83	Salmonella_phage	3.6e-52	100.0
WP_001135225.1\|2020503_2020854_+	HNH endonuclease	Q8HA82	Salmonella_phage	2.5e-65	100.0
WP_000929191.1\|2020979_2021474_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	4.6e-89	100.0
WP_000088182.1\|2021470_2023204_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	0.0e+00	100.0
WP_000605609.1\|2023215_2023398_+	hypothetical protein	Q8HAD5	Salmonella_phage	1.0e-25	100.0
WP_000466254.1\|2023397_2024639_+\|portal	phage portal protein	Q8HAD4	Salmonella_phage	2.0e-242	99.8
WP_001193639.1\|2024616_2025267_+\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	1.5e-119	100.0
WP_000257528.1\|2025281_2026487_+\|capsid	phage major capsid protein	Q8HAD2	Salmonella_phage	1.6e-223	100.0
WP_000601353.1\|2026537_2026738_+	hypothetical protein	Q8HAD1	Salmonella_phage	1.4e-28	100.0
WP_000927378.1\|2026740_2027064_+\|head,tail	phage gp6-like head-tail connector protein	A0A192Y8J4	Salmonella_phage	6.3e-55	100.0
WP_000702408.1\|2027060_2027465_+\|head	phage head closure protein	Q8HAC9	Salmonella_phage	1.4e-72	100.0
WP_001135697.1\|2027436_2027949_+	hypothetical protein	Q8HAC8	Salmonella_phage	4.6e-92	100.0
WP_000779218.1\|2027945_2028506_+	hypothetical protein	Q8HAC7	Salmonella_phage	3.0e-105	100.0
WP_023233175.1\|2028509_2028674_+	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	3.8e-24	98.1
WP_001007991.1\|2028663_2030160_+\|tail	phage tail sheath subtilisin-like domain-containing protein	Q8HAC5	Salmonella_phage	2.7e-278	100.0
WP_000515952.1\|2030159_2030516_+\|tail	phage tail tube protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
WP_000588852.1\|2030512_2030839_+\|tail	phage tail assembly protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
WP_000785385.1\|2030923_2032852_+\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	0.0e+00	99.8
WP_000863818.1\|2032885_2034226_+	DNA circularization N-terminal domain-containing protein	A0A192Y5U9	Salmonella_phage	5.7e-251	99.6
WP_001066636.1\|2034222_2035281_+	hypothetical protein	Q8HAC0	Salmonella_phage	1.3e-202	100.0
WP_001273649.1\|2035280_2035814_+\|plate	phage baseplate assembly protein	Q8HAB9	Salmonella_phage	1.4e-96	100.0
WP_000605050.1\|2035818_2036232_+	phage GP46 family protein	Q8HAB8	Salmonella_phage	1.1e-75	100.0
WP_014343856.1\|2036203_2036749_+\|plate	baseplate J/gp47 family protein	Q8HAB7	Salmonella_phage	9.2e-99	100.0
WP_014343855.1\|2036783_2037305_+\|plate	baseplate J/gp47 family protein	Q8HAB6	Salmonella_phage	2.9e-94	100.0
WP_001207832.1\|2037307_2037895_+	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	2.9e-114	100.0
WP_000554737.1\|2037881_2039444_+	hypothetical protein	Q8HAB4	Salmonella_phage	2.6e-287	100.0
WP_015701331.1\|2039413_2040013_+\|tail	tail fiber assembly protein	Q8HAB3	Salmonella_phage	5.9e-107	100.0
WP_000492926.1\|2040297_2041305_-	type III secretion system effector arginine glycosyltransferase	Q8HAB2	Salmonella_phage	7.9e-197	100.0
WP_001526483.1\|2041517_2041739_+	helix-turn-helix domain-containing protein	Q8HAB1	Salmonella_phage	1.2e-36	100.0
WP_000500831.1\|2042369_2042531_+	hypothetical protein	NA	NA	NA	NA
WP_000394196.1\|2042657_2043077_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000457662.1\|2043079_2044348_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.2e-227	92.2
WP_000208509.1\|2044802_2045015_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131109.1\|2045025_2045214_+	hypothetical protein	NA	NA	NA	NA
WP_023972908.1\|2045474_2046671_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.1e-109	56.3
WP_000107430.1\|2047320_2047620_+	membrane protein	NA	NA	NA	NA
WP_000377041.1\|2047711_2048407_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_001157322.1\|2048480_2049911_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_7

2153954 : 2160763

Salmonella_phage(33.33%)

tail,integrase

attL 2156164:2156186|attR 2165879:2165901

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000856224.1\|2153954_2154185_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
WP_000168393.1\|2154322_2154697_+	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000979702.1\|2154697_2155573_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000722368.1\|2155589_2155943_+	YebY family protein	NA	NA	NA	NA
2156164:2156186	attL	NA	NA	NA	NA
WP_176731523.1\|2156316_2157159_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	3.3e-71	50.9
WP_010989030.1\|2157230_2157725_-	hypothetical protein	A0A0U2I1R6	Escherichia_phage	8.2e-22	68.9
WP_001013467.1\|2157914_2158145_+	hypothetical protein	Q8HA86	Salmonella_phage	6.1e-28	93.7
WP_001050882.1\|2158198_2158732_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.4e-11	48.3
WP_000789530.1\|2158988_2159156_-	lytic enzyme	NA	NA	NA	NA
WP_001521334.1\|2159220_2159409_-	hypothetical protein	NA	NA	NA	NA
WP_000275418.1\|2159881_2160763_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	2.2e-65	76.0
2165879:2165901	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2949239 : 3048045

Salmonella_phage(42.59%)

lysis,terminase,tRNA,holin,protease,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000938191.1\|2949239_2949920_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	8.3e-81	70.6
WP_000374050.1\|2950540_2951200_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.3e-43	51.9
WP_000904446.1\|2951286_2951616_+	sulfurtransferase TusE	NA	NA	NA	NA
WP_000072884.1\|2951612_2951894_-	acylphosphatase	NA	NA	NA	NA
WP_000548082.1\|2951942_2952722_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000859419.1\|2952747_2953296_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_000140480.1\|2953510_2954722_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000561983.1\|2954779_2955097_+	heat shock protein HspQ	NA	NA	NA	NA
WP_001537782.1\|2955141_2955555_-	CoA-binding protein	NA	NA	NA	NA
WP_000847719.1\|2955728_2956391_+	DUF2057 family protein	NA	NA	NA	NA
WP_000424187.1\|2956485_2956944_+	methylglyoxal synthase	NA	NA	NA	NA
WP_041112204.1\|2956979_2959034_-	DNA helicase IV	A7KV33	Bacillus_phage	1.4e-19	27.6
WP_001261222.1\|2959157_2959604_+	YccF domain-containing protein	NA	NA	NA	NA
WP_000950880.1\|2959622_2961776_+	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001202375.1\|2961762_2962368_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000288732.1\|2962584_2963094_+	cell division inhibitor SulA	NA	NA	NA	NA
WP_001674965.1\|2963450_2964503_+	porin OmpA	NA	NA	NA	NA
WP_000877172.1\|2964574_2965027_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000156453.1\|2965212_2966973_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000227928.1\|2967041_2967560_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_001537784.1\|2967659_2967827_-	ribosome modulation factor	NA	NA	NA	NA
WP_000759136.1\|2968082_2968646_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_000433414.1\|2968642_2970283_-	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000333152.1\|2970287_2971541_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000053044.1\|2971555_2973463_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
WP_001086485.1\|2973475_2975584_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000224069.1\|2975682_2976792_+	YcbX family protein	NA	NA	NA	NA
WP_001220671.1\|2976788_2977331_-	cell division protein ZapC	NA	NA	NA	NA
WP_000291723.1\|2977496_2978507_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_000193784.1\|2978714_2981327_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
WP_000497441.1\|2981753_2981945_+	DinI-like family protein	S4TNM0	Salmonella_phage	6.2e-26	95.2
WP_001525490.1\|2982215_2982902_+	hypothetical protein	NA	NA	NA	NA
WP_010989011.1\|2982886_2983186_+	hypothetical protein	NA	NA	NA	NA
WP_000334547.1\|2983254_2983881_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
WP_001533476.1\|2984528_2985497_-	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	7.9e-194	99.7
WP_000143167.1\|2985972_2986554_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
WP_000178849.1\|2989044_2989287_-	hypothetical protein	NA	NA	NA	NA
WP_000033415.1\|2989325_2992676_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	68.6
WP_000246065.1\|2992747_2993452_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.2e-67	62.6
WP_000606351.1\|2993349_2994087_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.6e-114	76.1
WP_001152415.1\|2994096_2994792_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-89	66.7
WP_000877926.1\|2994881_2995415_+	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_000725267.1\|2995531_2996029_-	Ail/Lom family outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
WP_023972925.1\|2996127_2996460_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.2e-34	60.6
WP_010989010.1\|2996456_2999444_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	8.2e-266	62.1
WP_010989009.1\|2999523_2999853_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
WP_000478859.1\|2999849_3000248_-\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	8.6e-30	56.8
WP_000132756.1\|3000293_3001043_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.7e-90	68.6
WP_000196702.1\|3001054_3001456_-\|tail	tail protein	K7PHM6	Enterobacterial_phage	1.5e-42	60.9
WP_000453194.1\|3001452_3002019_-\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	9.5e-14	97.8
WP_023972924.1\|3001999_3002299_-	ATP-binding protein	K7PH43	Enterobacteria_phage	5.9e-15	45.1
WP_001107908.1\|3002291_3002615_-	DUF2190 family protein	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
WP_010989008.1\|3002705_3004787_-\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	4.8e-265	69.5
WP_001009207.1\|3004710_3006258_-\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	2.8e-177	64.3
WP_000196190.1\|3006254_3006461_-	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
WP_000989241.1\|3006457_3008596_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.4e-290	72.6
WP_000371784.1\|3008552_3009086_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.0e-33	48.1
WP_001541990.1\|3009293_3009773_-\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
WP_000984586.1\|3009790_3010243_-	lysozyme	A0A0M4R365	Salmonella_phage	2.3e-79	97.3
WP_001574216.1\|3010226_3010556_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_001141973.1\|3010831_3011518_+\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
WP_000798705.1\|3011878_3012328_+	hypothetical protein	NA	NA	NA	NA
WP_001534733.1\|3012463_3012589_-	hypothetical protein	NA	NA	NA	NA
WP_001047631.1\|3013145_3013943_-	antitermination protein	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
WP_001617856.1\|3013932_3014079_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
WP_001096552.1\|3014075_3014687_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	6.9e-79	91.6
WP_000929805.1\|3014895_3015498_-	DUF1367 family protein	S4TTI0	Salmonella_phage	8.3e-109	98.5
WP_000807548.1\|3015580_3015802_-	hypothetical protein	NA	NA	NA	NA
WP_001217665.1\|3015913_3016147_-	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
WP_014343823.1\|3016438_3016729_-	hypothetical protein	NA	NA	NA	NA
WP_000065108.1\|3016806_3017118_-	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
WP_000113629.1\|3017114_3017462_-	DUF977 family protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
WP_000800010.1\|3017472_3018222_-	ATP-binding protein	S4TNF5	Salmonella_phage	3.6e-138	99.6
WP_000062941.1\|3018224_3019208_-	replication protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
WP_001574095.1\|3019292_3019667_-	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
WP_000370145.1\|3019632_3019872_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
WP_001038966.1\|3019991_3020402_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
WP_077910972.1\|3020451_3020712_+	hypothetical protein	NA	NA	NA	NA
WP_000917564.1\|3020704_3020863_+	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-22	98.1
WP_000407058.1\|3020947_3021184_+	hypothetical protein	S4TSN6	Salmonella_phage	1.5e-34	81.1
WP_000017133.1\|3021310_3024196_+	PD-(D/E)XK nuclease-like domain-containing protein	S4TNL0	Salmonella_phage	0.0e+00	97.3
WP_001539618.1\|3024158_3025316_+	recombinase RecT	S4TTE8	Salmonella_phage	1.6e-217	100.0
WP_001237031.1\|3025358_3025598_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_000065276.1\|3025638_3025887_+	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_000191399.1\|3027417_3028620_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_000893207.1\|3028697_3030134_-	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_023972943.1\|3030378_3031593_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000762342.1\|3031909_3032371_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000117870.1\|3032571_3033972_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
WP_000977713.1\|3034578_3035670_+	porin OmpF	Q1MVN1	Enterobacteria_phage	2.2e-99	51.7
WP_000462653.1\|3035854_3037045_+	aspartate transaminase	NA	NA	NA	NA
WP_001109471.1\|3037106_3037754_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000357052.1\|3037781_3038330_-	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
WP_000925872.1\|3038589_3040431_-	L,D-transpeptidase	NA	NA	NA	NA
WP_000572724.1\|3040775_3045242_-	chromosome partition protein MukB	NA	NA	NA	NA
WP_000060025.1\|3045241_3045946_-	chromosome partition protein MukE	NA	NA	NA	NA
WP_001288828.1\|3045926_3047249_-	chromosome partition protein MukF	NA	NA	NA	NA
WP_001154025.1\|3047241_3048045_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA

DBSCAN-SWA_9

3098137 : 3106869

Enterobacteria_phage(14.29%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085983316.1\|3098137_3099392_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	5.4e-17	33.9
WP_000502119.1\|3099855_3100314_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_000934063.1\|3100505_3102782_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520789.1\|3102812_3103133_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000447499.1\|3103456_3103678_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000125877.1\|3103807_3105754_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
WP_001201751.1\|3105750_3106869_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_10

3231536 : 3271961

Salmonella_phage(60.34%)

lysis,terminase,protease,integrase,coat,portal,holin

attL 3231082:3231104|attR 3272027:3272049

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3231082:3231104	attL	NA	NA	NA	NA
WP_000915523.1\|3231536_3231899_+	GtrA family protein	I1TED9	Salmonella_phage	3.9e-61	100.0
WP_023893012.1\|3231895_3232828_+	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	8.7e-174	98.7
WP_023220032.1\|3232817_3234275_+	glucosyltransferase domain-containing protein	A0A192Y7W8	Salmonella_phage	1.9e-239	99.2
WP_023972981.1\|3234333_3236337_-	endorhamnosidase	A0A192Y6X2	Salmonella_phage	0.0e+00	96.9
WP_031306894.1\|3236448_3237222_-	ORF6N domain-containing protein	H6WRU9	Salmonella_phage	8.0e-80	66.1
WP_031306893.1\|3237305_3237944_-	hypothetical protein	H6WRU8	Salmonella_phage	5.3e-98	84.0
WP_023972978.1\|3238017_3238191_-	hypothetical protein	NA	NA	NA	NA
WP_023972977.1\|3238290_3238932_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023167446.1\|3238992_3239322_+	hypothetical protein	NA	NA	NA	NA
WP_023167447.1\|3239339_3241157_-	hypothetical protein	A0A2H4FNB8	Salmonella_phage	4.1e-276	93.3
WP_023893010.1\|3241156_3242527_-	phage DNA ejection protein	A0A1R3Y5Q4	Salmonella_virus	1.3e-242	97.4
WP_023167449.1\|3242536_3243226_-	hypothetical protein	A0A1R3Y5P8	Salmonella_virus	1.4e-88	98.3
WP_000627703.1\|3243228_3243684_-	DUF2824 family protein	E7C9U3	Salmonella_phage	1.8e-87	100.0
WP_023167450.1\|3243683_3244385_-	hypothetical protein	C6ZR14	Salmonella_phage	2.8e-76	97.9
WP_001122424.1\|3244388_3245807_-	packaged DNA stabilization protein gp10	A0A075B8I2	Enterobacteria_phage	7.6e-278	100.0
WP_001166098.1\|3245766_3246267_-	packaged DNA stabilization gp4 family protein	I1TEJ0	Salmonella_phage	5.5e-90	99.4
WP_023167451.1\|3246250_3246811_-	hypothetical protein	I6S1J7	Salmonella_phage	1.6e-101	98.4
WP_023167452.1\|3246851_3248144_-\|coat	coat protein	C6ZR10	Salmonella_phage	2.3e-241	98.8
WP_023167453.1\|3248143_3249055_-	scaffolding protein	A0A192Y6T4	Salmonella_phage	1.1e-160	99.7
WP_023170969.1\|3249068_3251246_-\|portal	portal protein	A0A2H4FNE2	Salmonella_phage	0.0e+00	99.4
WP_023972976.1\|3251245_3252745_-\|terminase	terminase large subunit	A0A192Y824	Salmonella_phage	1.0e-304	99.2
WP_000729925.1\|3252722_3253211_-	DNA-packaging protein	O80290	Bacteriophage	2.9e-88	100.0
WP_012532521.1\|3253214_3253619_-	hypothetical protein	A0A192Y6U9	Salmonella_phage	1.5e-66	99.3
WP_000808100.1\|3253621_3253864_-	DUF2560 family protein	A0A192Y6S9	Salmonella_phage	1.0e-33	100.0
WP_001028469.1\|3254187_3254709_-	KilA-N domain-containing protein	H6WRZ8	Salmonella_phage	1.9e-101	100.0
WP_011233123.1\|3254921_3255371_-\|lysis	lysis protein	A0A2D1GLQ7	Escherichia_phage	3.0e-63	87.8
WP_023167456.1\|3255388_3255826_-	lysozyme	Q5G8R3	Enterobacteria_phage	3.7e-74	97.9
WP_000738703.1\|3255809_3256136_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_022630928.1\|3256360_3256879_-	HNH endonuclease	A0A1V0E5R7	Salmonella_phage	6.3e-57	66.9
WP_000027545.1\|3257149_3257638_-	DUF1133 family protein	I6S672	Salmonella_phage	3.0e-77	87.0
WP_023167457.1\|3257634_3257814_-	hypothetical protein	A0A1V0E5I7	Salmonella_phage	1.6e-23	98.3
WP_000149926.1\|3257794_3257998_-	phage NinH family protein	Q5G8R8	Enterobacteria_phage	7.2e-33	100.0
WP_000036317.1\|3257994_3258219_-	hypothetical protein	Q5G8R9	Enterobacteria_phage	2.2e-38	100.0
WP_001129733.1\|3258215_3258827_-	recombination protein NinG	A0A075B8E9	Enterobacteria_phage	1.3e-98	100.0
WP_000950959.1\|3258819_3258996_-	protein ninF	I6S668	Salmonella_phage	2.5e-26	100.0
WP_001531428.1\|3258988_3259321_-	DUF2591 domain-containing protein	A0A075B8G3	Enterobacteria_phage	3.5e-61	100.0
WP_000113772.1\|3259323_3259500_-	NinE family protein	I6RSQ2	Salmonella_phage	4.6e-28	100.0
WP_000679702.1\|3259466_3259640_-	hypothetical protein	C6ZR56	Salmonella_phage	5.2e-32	100.0
WP_000736921.1\|3259636_3260074_-	recombination protein NinB	A8CGE3	Salmonella_phage	1.3e-79	100.0
WP_001248406.1\|3260147_3261524_-	DNA helicase	A0A075B8G2	Enterobacteria_phage	3.3e-254	100.0
WP_000067075.1\|3261520_3262336_-	replication protein	A0A075B8J2	Enterobacteria_phage	9.4e-148	100.0
WP_001125981.1\|3262328_3262475_-	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_000424167.1\|3262509_3262788_-	lambda phage CII family protein	Q5G8T2	Enterobacteria_phage	2.5e-44	100.0
WP_000276884.1\|3262894_3263080_-	Cro/Cl family transcriptional regulator	Q5G8T3	Enterobacteria_phage	5.4e-27	100.0
WP_001095984.1\|3263160_3263811_+	LexA family transcriptional regulator	B1B6L9	Salmonella_phage	5.4e-122	100.0
WP_000216175.1\|3264164_3264467_+	hypothetical protein	B8K1E6	Salmonella_phage	1.1e-48	98.0
WP_001682202.1\|3264487_3265066_-	superinfection exclusion B family protein	A0A075B8E6	Enterobacteria_phage	8.8e-92	100.0
WP_172967229.1\|3265258_3266050_+	pentapeptide repeat-containing protein	I6S1T3	Salmonella_phage	2.2e-32	91.5
WP_023167636.1\|3266384_3266558_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	I6R987	Salmonella_phage	2.4e-21	94.2
WP_000156731.1\|3266538_3266727_+	DUF5444 family protein	I6S647	Salmonella_phage	3.7e-31	100.0
WP_023167637.1\|3266716_3266860_+	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	1.6e-18	95.7
WP_023167638.1\|3266856_3267564_+	hypothetical protein	I6R0N0	Salmonella_phage	2.2e-137	99.1
WP_001253478.1\|3267563_3267848_+	Anti-RecBCD protein 1	E7C9P9	Salmonella_phage	1.5e-44	97.9
WP_022630922.1\|3267894_3268188_+	DUF2856 family protein	Q5G8U3	Enterobacteria_phage	3.8e-43	87.6
WP_023167639.1\|3268198_3268363_+	DUF2737 family protein	A0A2I6PID4	Escherichia_phage	5.5e-23	98.1
WP_022630920.1\|3268359_3268758_+	hypothetical protein	A0A222YY85	Escherichia_phage	3.5e-31	72.0
WP_022630919.1\|3268754_3269054_+	hypothetical protein	A5VWB2	Enterobacteria_phage	3.1e-56	96.0
WP_023972681.1\|3269504_3269978_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	2.5e-68	79.5
WP_153266261.1\|3270444_3270585_+	hypothetical protein	A0A0M4QWX3	Salmonella_phage	3.2e-16	100.0
WP_001556007.1\|3270694_3270913_+	excisionase	A0A1V0E5M4	Salmonella_phage	5.7e-36	100.0
WP_000533679.1\|3270890_3271961_+\|integrase	tyrosine-type recombinase/integrase	A0A1V0E5M7	Salmonella_phage	1.0e-154	100.0
3272027:3272049	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4515083 : 4562126

Burkholderia_phage(40.91%)

holin,tRNA,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001182237.1\|4515083_4516082_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039339.1\|4516169_4517480_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416272.1\|4517726_4518242_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4518340_4518550_-	CsbD family protein	NA	NA	NA	NA
WP_010989093.1\|4518571_4518685_-	hypothetical protein	NA	NA	NA	NA
WP_001128116.1\|4518681_4520007_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4520185_4520794_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002902.1\|4520902_4521271_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017359.1\|4521441_4523862_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4523960_4524833_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019219.1\|4524846_4525344_-	chorismate lyase	NA	NA	NA	NA
WP_000782504.1\|4525524_4526442_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973645.1\|4526605_4527964_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4528052_4529162_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695417.1\|4529523_4530714_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382573.1\|4530845_4532390_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252085.1\|4532404_4533295_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982749.1\|4533460_4533871_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750804.1\|4534013_4536110_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_000977979.1\|4536109_4536847_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_014343934.1\|4536843_4537512_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4537545_4537788_-	outer membrane protein	NA	NA	NA	NA
WP_000790037.1\|4538231_4539881_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136400.1\|4540225_4541575_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4541707_4542055_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226442.1\|4542629_4542917_+\|holin	putative holin	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
WP_001270441.1\|4542919_4543525_+	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
WP_000777266.1\|4543537_4543852_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_000449433.1\|4544011_4544467_+	Gp37 family protein	NA	NA	NA	NA
WP_000875314.1\|4544463_4544661_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000729852.1\|4544650_4546078_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
WP_000907494.1\|4546077_4546602_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_001003642.1\|4546653_4546971_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4546930_4547059_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001262500.1\|4547155_4549510_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	6.9e-66	30.6
WP_000271423.1\|4549509_4550463_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001269716.1\|4550462_4550672_+\|tail	tail protein X	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000818154.1\|4550659_4551703_+	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
WP_000679398.1\|4551712_4552435_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
WP_000593182.1\|4552762_4553125_+	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000703632.1\|4553121_4554051_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	8.8e-150	83.8
WP_001095011.1\|4554050_4555598_+	membrane protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
WP_001093501.1\|4555761_4556121_+	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_000951736.1\|4556111_4557227_+\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
WP_000359500.1\|4557219_4557852_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
WP_000368196.1\|4557854_4559600_+\|tail	tail fiber protein	A0A0M3ULF6	Salmonella_phage	3.2e-52	52.2
WP_001526208.1\|4559604_4560210_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_000084331.1\|4560206_4560662_+	hypothetical protein	NA	NA	NA	NA
WP_010989092.1\|4560910_4561201_+	membrane protein	NA	NA	NA	NA
WP_000587738.1\|4561397_4562126_+	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3

DBSCAN-SWA_12

4678974 : 4744780

Escherichia_phage(38.64%)

lysis,head,terminase,tail,portal,integrase,holin,protease,plate,capsid

attL 4708832:4708878|attR 4740155:4740201

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000208240.1\|4678974_4679505_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_001293360.1\|4679514_4680846_+	HslU--HslV peptidase ATPase subunit	W6AS21	Erwinia_phage	2.4e-44	28.3
WP_023972960.1\|4680912_4681842_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_000872918.1\|4681934_4682420_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_000051370.1\|4682641_4682881_-	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_000084285.1\|4683279_4684125_+	aquaporin	M1HWZ0	Paramecium_bursaria_Chlorella_virus	2.0e-15	28.6
WP_000136809.1\|4684145_4685654_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_001250625.1\|4685765_4686776_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000796300.1\|4686872_4687619_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_000155237.1\|4687725_4688154_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_000802242.1\|4688254_4688851_+	YiiQ family protein	NA	NA	NA	NA
WP_001216339.1\|4688963_4689731_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_001088049.1\|4689822_4690587_-	epimerase	NA	NA	NA	NA
WP_001738619.1\|4690596_4690887_-	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA	NA	NA	NA
WP_000774147.1\|4690969_4691845_-	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA
WP_000090737.1\|4691873_4692896_-	autoinducer 2 ABC transporter substrate-binding protein LsrB	NA	NA	NA	NA
WP_000981826.1\|4692924_4693926_-	autoinducer 2 ABC transporter permease LsrD	NA	NA	NA	NA
WP_000911134.1\|4693922_4694966_-	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA
WP_001167250.1\|4694959_4696495_-	autoinducer 2 ABC transporter ATP-binding protein LsrA	A0A2H4PQG7	Staphylococcus_phage	6.3e-20	30.0
WP_001283048.1\|4696750_4697710_+	transcriptional regulator LsrR	NA	NA	NA	NA
WP_000113085.1\|4697797_4699390_+	autoinducer-2 kinase	NA	NA	NA	NA
WP_001173080.1\|4699403_4699754_+	cupin domain-containing protein	NA	NA	NA	NA
WP_000061008.1\|4699990_4700155_-	hypothetical protein	NA	NA	NA	NA
WP_001519915.1\|4700252_4700975_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000557889.1\|4701037_4702078_-	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA
WP_000646499.1\|4702087_4703047_-	aminoimidazole riboside kinase	NA	NA	NA	NA
WP_000777317.1\|4703057_4704392_-	MFS transporter	NA	NA	NA	NA
WP_000750761.1\|4704654_4705410_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_000758711.1\|4705510_4706500_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000591793.1\|4706703_4707666_-	6-phosphofructokinase	NA	NA	NA	NA
WP_001077320.1\|4707850_4708753_-	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
4708832:4708878	attL	NA	NA	NA	NA
WP_000468308.1\|4708989_4709208_-	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_000882949.1\|4709289_4710453_-	phage late control D family protein	U5N3V4	Enterobacteria_phage	7.0e-205	99.2
WP_000978885.1\|4710452_4710932_-\|tail	phage tail protein	O64315	Escherichia_phage	1.5e-84	99.4
WP_000069914.1\|4710946_4713394_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	97.1
WP_000785970.1\|4713386_4713506_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001031306.1\|4713538_4713814_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
WP_001251408.1\|4713870_4714389_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001286720.1\|4714401_4715592_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	4.8e-225	99.5
WP_010835363.1\|4715651_4716245_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	1.8e-103	97.0
WP_023891855.1\|4716464_4716953_+	hypothetical protein	A0A1S6KZZ0	Salmonella_phage	2.1e-70	82.6
WP_010835343.1\|4716922_4717540_+\|tail	tail fiber assembly protein	A0A1S6KZY8	Salmonella_phage	5.3e-95	83.6
WP_022631136.1\|4717544_4718078_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	5.7e-77	80.3
WP_023167498.1\|4718080_4719643_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	1.5e-154	49.4
WP_001285338.1\|4719639_4720251_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	6.4e-117	99.5
WP_001121478.1\|4720243_4721152_-\|plate	baseplate assembly protein	Q858V6	Yersinia_virus	8.8e-163	100.0
WP_000127163.1\|4721156_4721504_-	GPW/gp25 family protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_001093737.1\|4721500_4722136_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	9.0e-114	99.1
WP_001001780.1\|4722202_4722655_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	6.3e-77	100.0
WP_000917156.1\|4722647_4723115_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	8.7e-82	98.7
WP_000040673.1\|4723222_4723648_-\|lysis	LysB family phage lysis regulatory protein	U5N3W5	Enterobacteria_phage	4.7e-66	96.5
WP_000736607.1\|4723635_4724061_-	hypothetical protein	U5N096	Enterobacteria_phage	2.8e-58	95.7
WP_000123124.1\|4724572_4724854_-\|holin	phage holin family protein	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_000846399.1\|4724857_4725061_-\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
WP_000988633.1\|4725060_4725570_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_001682330.1\|4725669_4726413_-\|terminase	terminase endonuclease subunit	U5N091	Enterobacteria_phage	3.3e-123	97.2
WP_001248559.1\|4726416_4727490_-\|capsid	phage major capsid protein, P2 family	Q94MD1	Enterobacteria_phage	5.1e-202	100.0
WP_001085976.1\|4727548_4728403_-\|capsid	GPO family capsid scaffolding protein	Q94MI4	Enterobacteria_phage	9.0e-133	96.5
WP_010835387.1\|4728576_4730349_+\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.7
WP_000038172.1\|4730348_4731383_+\|portal	phage portal protein	A0A0F7LDI7	Escherichia_phage	1.2e-200	99.7
WP_010835386.1\|4731813_4734021_+	AAA family ATPase	NA	NA	NA	NA
WP_000216280.1\|4734251_4736540_-	replication endonuclease	Q858T4	Yersinia_virus	0.0e+00	97.0
WP_000027666.1\|4736529_4736805_-	DUF5405 family protein	U5N3W1	Enterobacteria_phage	1.6e-43	97.8
WP_001113272.1\|4736801_4737026_-	TraR/DksA family transcriptional regulator	A0A0F7LDG9	Escherichia_phage	8.5e-35	97.3
WP_001277964.1\|4737025_4737328_-	DUF5405 family protein	U5N0U2	Enterobacteria_phage	2.5e-45	97.0
WP_000288879.1\|4737327_4737552_-	DUF2732 family protein	S4TP68	Salmonella_phage	2.3e-32	98.6
WP_000217677.1\|4737615_4738116_-	hypothetical protein	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
WP_001308179.1\|4738285_4738558_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
WP_000777029.1\|4738694_4738988_+	helix-turn-helix domain-containing protein	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
WP_000985246.1\|4739057_4740038_+\|integrase	tyrosine-type recombinase/integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
WP_001233463.1\|4740223_4740724_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
4740155:4740201	attR	NA	NA	NA	NA
WP_001033731.1\|4740874_4741573_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_000580402.1\|4741569_4742943_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	7.2e-15	25.6
WP_000133444.1\|4742993_4743389_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_000559232.1\|4743400_4744090_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_000122635.1\|4744159_4744780_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	1.4e-63	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014982

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection