CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP011123	Acetobacter oryzifermentans strain SLV-7 plasmid unnamed3, complete sequence	0 crisprs	NA	0	0
NZ_CP011122	Acetobacter oryzifermentans strain SLV-7 plasmid unnamed2, complete sequence	0 crisprs	NA	0	1
NZ_CP011121	Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence	0 crisprs	csa3	0	1
NZ_CP011120	Acetobacter oryzifermentans strain SLV-7 chromosome, complete genome	2 crisprs	cas5,cas8c,cas7,cas4,cas1,cas2,cas3,DEDDh,cas3HD,WYL,DinG,csa3	2	6

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1983 : 30342

Stx2-converting_phage(33.33%)

transposase,integrase

attL 15636:15651|attR 31586:31601

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063355063.1\|1983_3063_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_063355036.1\|3221_3821_+	hypothetical protein	NA	NA	NA	NA
WP_063355037.1\|3858_5385_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.7e-87	38.3
WP_063355038.1\|5374_6508_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_063355039.1\|6539_9836_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	2.7e-60	27.6
WP_063355040.1\|9837_10575_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_063355041.1\|10754_10943_-	hypothetical protein	NA	NA	NA	NA
WP_157884545.1\|11225_11675_-	hypothetical protein	NA	NA	NA	NA
WP_063355043.1\|11854_12133_+	BrnT family toxin	NA	NA	NA	NA
WP_063355044.1\|12120_12450_+	DUF1870 family protein	NA	NA	NA	NA
WP_063355045.1\|12648_13728_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_063355046.1\|13818_14163_-	endoribonuclease MazF	NA	NA	NA	NA
WP_063355047.1\|14159_14402_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_063355048.1\|14618_14876_-	hypothetical protein	NA	NA	NA	NA
WP_063355049.1\|15013_16093_+\|transposase	IS5 family transposase	NA	NA	NA	NA
15636:15651	attL	NA	NA	NA	NA
WP_063355050.1\|17375_18230_+	hypothetical protein	NA	NA	NA	NA
WP_157884546.1\|18400_20431_+	hypothetical protein	NA	NA	NA	NA
WP_063353329.1\|20656_22267_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.6e-112	42.6
WP_020944072.1\|22330_22678_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	1.5e-25	52.4
WP_063353330.1\|22674_23034_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.7e-05	44.1
WP_145912893.1\|23695_24833_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.9e-53	41.1
WP_063355052.1\|25549_27124_+	hypothetical protein	NA	NA	NA	NA
WP_167348744.1\|27653_28490_-	hypothetical protein	NA	NA	NA	NA
WP_063355053.1\|28833_30342_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
31586:31601	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP011121

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2036 : 119132

106

uncultured_Caudovirales_phage(37.5%)

transposase,integrase

attL 16674:16690|attR 119161:119188

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006115564.1\|2036_3116_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_006115565.1\|3552_3972_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_006115566.1\|3937_4429_+	hypothetical protein	NA	NA	NA	NA
WP_039891567.1\|4428_5472_+	hypothetical protein	NA	NA	NA	NA
WP_035350857.1\|5703_6663_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_006115571.1\|6981_7620_+	HPP family protein	NA	NA	NA	NA
WP_082823244.1\|7653_8118_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_006115867.1\|8316_8895_-	DUF488 domain-containing protein	A0A2K9L455	Tupanvirus	5.1e-23	40.0
WP_010512346.1\|8930_9146_+	DUF2945 domain-containing protein	NA	NA	NA	NA
WP_063354992.1\|9159_9432_-	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_003631279.1\|9428_9818_-	PAS domain S-box protein	NA	NA	NA	NA
WP_010512344.1\|9879_10245_-	DUF488 family protein	NA	NA	NA	NA
WP_063354993.1\|10251_12576_-	nitric oxide reductase	NA	NA	NA	NA
WP_006117537.1\|12667_13984_-	hypothetical protein	NA	NA	NA	NA
WP_026019419.1\|14072_14525_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_035366749.1\|14526_15018_+	hypothetical protein	NA	NA	NA	NA
WP_088364821.1\|16267_17477_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	5.0e-97	64.0
16674:16690	attL	NA	NA	NA	NA
WP_039892090.1\|18417_19410_-	TonB family protein	NA	NA	NA	NA
16674:16690	attL	NA	NA	NA	NA
WP_006117544.1\|19507_19687_-	hypothetical protein	NA	NA	NA	NA
WP_006117545.1\|19738_20269_+	hypothetical protein	NA	NA	NA	NA
WP_006117546.1\|20345_22568_+	TonB-dependent receptor	NA	NA	NA	NA
WP_019088957.1\|23334_23634_+	hypothetical protein	NA	NA	NA	NA
WP_006117547.1\|23620_24823_+	porin	NA	NA	NA	NA
WP_167348742.1\|24954_25710_+\|transposase	transposase	NA	NA	NA	NA
WP_063354995.1\|25726_25999_+	hypothetical protein	NA	NA	NA	NA
WP_096884248.1\|25988_27198_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-97	64.0
WP_063354997.1\|27293_28814_-	MFS transporter	NA	NA	NA	NA
WP_012813226.1\|29017_29896_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_082823246.1\|29899_30523_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_063354999.1\|30958_32380_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_045543339.1\|32720_33203_+	MSMEG_0572 family nitrogen starvation response protein	NA	NA	NA	NA
WP_063355000.1\|33227_34202_+	Nit6803 family nitriliase	NA	NA	NA	NA
WP_063355001.1\|34198_35308_+	MSMEG_0568 family radical SAM protein	NA	NA	NA	NA
WP_063355002.1\|35304_35868_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_063355027.1\|35867_36836_+	sll0787 family AIR synthase-like protein	NA	NA	NA	NA
WP_063355003.1\|36832_38011_+	MSMEG_0565 family glycosyltransferase	NA	NA	NA	NA
WP_020936672.1\|37998_38286_+	MSMEG_0570 family nitrogen starvation response protein	NA	NA	NA	NA
WP_035366434.1\|38302_39550_+	MSMEG_0569 family flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_063355004.1\|39564_41337_+	AMP-binding protein	A0A2K9KZV5	Tupanvirus	1.7e-08	20.7
WP_063355005.1\|41377_42139_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_114012474.1\|43060_44148_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-43	37.5
WP_012813198.1\|44297_44660_+	hypothetical protein	NA	NA	NA	NA
WP_003618686.1\|44873_45134_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_003618711.1\|45130_45424_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	A0A2H4JBF4	uncultured_Caudovirales_phage	2.1e-17	48.9
WP_006117365.1\|45609_46143_+	hypothetical protein	NA	NA	NA	NA
WP_006117366.1\|46212_47970_-	oleate hydratase	NA	NA	NA	NA
WP_097802310.1\|49788_50912_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	4.6e-52	42.5
WP_006115870.1\|51961_53347_+\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	2.5e-31	29.4
WP_063355028.1\|53512_53785_-	hypothetical protein	NA	NA	NA	NA
WP_006115745.1\|54187_55678_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_006115744.1\|56169_57093_+	Plasmid Encoded RepA protein	NA	NA	NA	NA
WP_019088965.1\|57823_58522_-	hypothetical protein	NA	NA	NA	NA
WP_081461418.1\|58518_59154_-	ParA family protein	W0LIU2	Mycobacterium_phage	2.7e-09	30.9
WP_006115743.1\|59608_64735_+	DEAD/DEAH box helicase family protein	I6WLR1	Burkholderia_virus	0.0e+00	39.8
WP_010511145.1\|66187_67219_-\|transposase	IS110 family transposase	NA	NA	NA	NA
66278:66294	attR	NA	NA	NA	NA
WP_100070283.1\|67237_68296_+	methionine synthase	NA	NA	NA	NA
66278:66294	attR	NA	NA	NA	NA
WP_052583250.1\|68405_69332_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_087651418.1\|69392_70146_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	5.5e-25	47.1
WP_006115735.1\|70289_70586_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012813272.1\|70582_70924_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_012813273.1\|71237_72317_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	5.3e-82	56.2
WP_012813274.1\|72325_73024_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.1e-83	69.7
WP_063355008.1\|73047_74343_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	8.0e-133	59.3
WP_006115730.1\|74342_74765_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.2e-48	67.9
WP_006115729.1\|74761_75115_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_006115727.1\|75557_77171_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.5e-43	28.8
WP_012813241.1\|77170_77572_+	nucleotidyltransferase	NA	NA	NA	NA
WP_006115724.1\|77568_77889_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_012812328.1\|78358_79609_-\|transposase	IS701-like element IS1452 family transposase	NA	NA	NA	NA
WP_035350857.1\|79807_80767_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_003631146.1\|81013_82405_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003631147.1\|82489_83647_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_035350860.1\|83734_84328_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_082823247.1\|85252_85669_+	DUF1348 family protein	NA	NA	NA	NA
WP_011251546.1\|86405_87587_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_010512344.1\|88534_88900_+	DUF488 family protein	NA	NA	NA	NA
WP_003631279.1\|88961_89351_+	PAS domain S-box protein	NA	NA	NA	NA
WP_063354992.1\|89347_89620_+	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_010512346.1\|89633_89849_-	DUF2945 domain-containing protein	NA	NA	NA	NA
WP_006115867.1\|89884_90463_+	DUF488 domain-containing protein	A0A2K9L455	Tupanvirus	5.1e-23	40.0
WP_082823248.1\|90661_91147_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_063355009.1\|91656_92919_-	sodium:proton antiporter	A0A2H4J428	uncultured_Caudovirales_phage	1.9e-14	31.6
WP_003618711.1\|93050_93344_-	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	A0A2H4JBF4	uncultured_Caudovirales_phage	2.1e-17	48.9
WP_003618686.1\|93340_93601_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_012813331.1\|94189_94993_-	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
WP_063355011.1\|94999_95827_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_035366644.1\|95878_96448_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_063355029.1\|97371_99027_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_063355012.1\|99029_99953_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_063355013.1\|99945_100947_+	TniQ family protein	NA	NA	NA	NA
WP_063355014.1\|101267_102347_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	2.0e-81	55.9
WP_096884248.1\|102534_103745_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-97	64.0
WP_006115730.1\|103909_104332_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.2e-48	67.9
WP_006115729.1\|104328_104682_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_167348743.1\|105051_105210_+	hypothetical protein	NA	NA	NA	NA
WP_010511145.1\|105232_106264_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_063355016.1\|106726_109861_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	2.5e-63	22.8
WP_063355017.1\|109860_110895_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_063355030.1\|110891_112151_-	TolC family protein	NA	NA	NA	NA
WP_007284432.1\|112326_112977_-	cation transporter	NA	NA	NA	NA
WP_063355018.1\|113050_113449_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_063355031.1\|113803_115468_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_063355019.1\|115470_116394_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_082823250.1\|116386_117388_+	hypothetical protein	NA	NA	NA	NA
WP_063355021.1\|117692_117884_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_096884248.1\|117921_119132_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-97	64.0
119161:119188	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP011120

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011120_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011120_1

952912-953603

TypeI

I-C

Consensus_repeat	Method
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	PILER-CR
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	CRISPRCasFinder
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	CRT

10 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP011120_1

>merge|NZ_CP011120|1|952912-953603|PILER-CR,CRISPRCasFinder,CRT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAACACCTACAACCTCGGATTGTCCGCGCTGGCAGGATGTCGCTCCCCGTGCGGGGGCGTGGATAGAAACTTCTTATAAGCCACGGATTCAAGGTCTAGGTTCCGTCGCTCCCCGTGCGGGGGCGTGGATAGAAACCTGTTTGTACAATTGTGCCGTCCAGTTTGCTGAGGTCGCTCCCCGTGCGGGGGCGTGGATAGAAACTGGTCATAGATGTAACCATCACCACGAAAATAGGTCGCTCCCCGTGCGGGGGCGTGGATAGAAACTGCAAGTGGCGGAAAATCAGGATGCACCGCTACGGTCGCTCCCCGTGCGGGGGCGTGGATAGAAACATTGTACCCAGAGCATGACTGGGCAAGCCATTATGTCGCTCCCCGTGCGGGGGCGTGGATAGAAACGGTGGCAATATCGACTGGCTGAAAGAGGCGTTTGTCGCTCCCCGTGCGGGGGCGTGGATAGAAACTCTCCTGCGCGGGTGTTCCATGCGGTGATTGCTTGAGTCGCTCCCCGTGCGGGAGCGTGGATAGAAACTGTTTGTCGTGCATTACGAACTCATTACGTGTCCGTCGCTCCTCGTGCGGGAGCGTGGATAGAAACCAGAATATAGGGCTGCTTTGTTTCTAGGCGTTTCGTCGCTCCCCGTGCGGGAGCGTGGATAGCCGA

>NZ_CP011120|1|1|952912-953537|PILER-CR
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	ACCTACAACCTCGGATTGTCCGCGCTGGCAGGAT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TTCTTATAAGCCACGGATTCAAGGTCTAGGTTCC
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	CTGTTTGTACAATTGTGCCGTCCAGTTTGCTGAG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TGGTCATAGATGTAACCATCACCACGAAAATAG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TGCAAGTGGCGGAAAATCAGGATGCACCGCTACG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	ATTGTACCCAGAGCATGACTGGGCAAGCCATTAT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	GGTGGCAATATCGACTGGCTGAAAGAGGCGTTT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TCTCCTGCGCGGGTGTTCCATGCGGTGATTGCTTGA
GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC	TGTTTGTCGTGCATTACGAACTCATTACGTGTCC
GTCGCTCCTCGTGCGGGAGCGTGGATAGAAAC

>NZ_CP011120|1|1|952912-953603|CRISPRCasFinder
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	ACCTACAACCTCGGATTGTCCGCGCTGGCAGGAT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TTCTTATAAGCCACGGATTCAAGGTCTAGGTTCC
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	CTGTTTGTACAATTGTGCCGTCCAGTTTGCTGAG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TGGTCATAGATGTAACCATCACCACGAAAATAG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TGCAAGTGGCGGAAAATCAGGATGCACCGCTACG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	ATTGTACCCAGAGCATGACTGGGCAAGCCATTAT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	GGTGGCAATATCGACTGGCTGAAAGAGGCGTTT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TCTCCTGCGCGGGTGTTCCATGCGGTGATTGCTTGA
GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC	TGTTTGTCGTGCATTACGAACTCATTACGTGTCC
GTCGCTCCTCGTGCGGGAGCGTGGATAGAAAC	CAGAATATAGGGCTGCTTTGTTTCTAGGCGTTTC
GTCGCTCCCCGTGCGGGAGCGTGGATAGCCGA

>NZ_CP011120|1|1|952912-953603|CRT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	ACCTACAACCTCGGATTGTCCGCGCTGGCAGGAT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TTCTTATAAGCCACGGATTCAAGGTCTAGGTTCC
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	CTGTTTGTACAATTGTGCCGTCCAGTTTGCTGAG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TGGTCATAGATGTAACCATCACCACGAAAATAG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TGCAAGTGGCGGAAAATCAGGATGCACCGCTACG
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	ATTGTACCCAGAGCATGACTGGGCAAGCCATTAT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	GGTGGCAATATCGACTGGCTGAAAGAGGCGTTT
GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC	TCTCCTGCGCGGGTGTTCCATGCGGTGATTGCTTGA
GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC	TGTTTGTCGTGCATTACGAACTCATTACGTGTCC
GTCGCTCCTCGTGCGGGAGCGTGGATAGAAAC	CAGAATATAGGGCTGCTTTGTTTCTAGGCGTTTC
GTCGCTCCCCGTGCGGGAGCGTGGATAGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011120.1\|WP_063353793.1\|963513_964560_+\|AsnC-family-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_006116159.1\|952348_952639_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP011120.1\|WP_157884496.1\|958259_958970_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_CP011120.1\|WP_157884494.1\|944648_944936_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375857
NZ_CP011120.1\|WP_063353788.1\|959490_959943_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_063354877.1\|944952_945294_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_157884497.1\|962788_963445_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_063353791.1\|960601_962701_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_006116162.1\|950652_951300_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP011120.1\|WP_063354878.1\|945693_946035_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_063353790.1\|960129_960609_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273775
NZ_CP011120.1\|WP_006116166.1\|947204_947885_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP011120.1\|WP_063353784.1\|953745_956139_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP011120.1\|WP_063353794.1\|965161_965683_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_157884495.1\|956404_956635_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_006116164.1\|949698_950646_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP011120.1\|WP_063353787.1\|959306_959489_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_063353783.1\|951305_952346_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP011120.1\|WP_063353782.1\|947881_949702_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP011120.1\|WP_082823231.1\|946394_946598_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011120.1\|WP_006116166.1\|947204_947885_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.49294e-109
NZ_CP011120.1\|WP_063353784.1\|953745_956139_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.43133e-56
NZ_CP011120.1\|WP_006116159.1\|952348_952639_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.01134e-32
NZ_CP011120.1\|WP_157884494.1\|944648_944936_+\|hypothetical-protein	gnl\|CDD\|375857	pfam18431, RNAse_A_bac, Bacterial CdiA-CT RNAse A domain. Contact-dependent growth inhibition (CDI) is an important mechanism of inter-bacterial competition found in many Gram-negative pathogens. CDI+ cells express cell-surface CdiA proteins that bind neighboring bacteria and deliver C-terminal toxin domains (CdiA-CT) to inhibit target-cell growth. Structure analysis of CdiA-CT shows that it adopts the same fold (with two beta-sheets forming an overall kidney shape) as angiogenin and other RNase A paralogs, but the toxin does not share sequence similarity with these nucleases and lacks the characteristic disulfide bonds of the superfamily. Furthermore, structural comparison analysis identified human angiogenin, Rana pipiens protein P-30 (onconase) and mouse pancreatic ribonuclease (RNase 1) as the closest structural homologs of CdiA-CT.	1.76154e-07
NZ_CP011120.1\|WP_006116164.1\|949698_950646_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.17807e-141
NZ_CP011120.1\|WP_157884496.1\|958259_958970_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.20988e-06
NZ_CP011120.1\|WP_006116162.1\|950652_951300_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.93147e-45
NZ_CP011120.1\|WP_063353782.1\|947881_949702_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP011120.1\|WP_063353790.1\|960129_960609_+\|hypothetical-protein	gnl\|CDD\|273775	TIGR01725, hypothetical_protein, phage protein, HK97 gp10 family. This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions].	0.00528442
NZ_CP011120.1\|WP_063353783.1\|951305_952346_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0

>NZ_CP011120.1|WP_006116159.1|952348_952639_+|CRISPR-associated-endonuclease-Cas2
MLVLITYDVNTEDAAGRRRLRRVARACLDYGQRVQHSVFECEVDPAQWAELRARLLDEADSAKDSLRFYQLGAKGRQRVEHVGAKPVLDLDGTLVF
>NZ_CP011120.1|WP_063353783.1|951305_952346_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRKHLNTIYVTTEDAWLRKDGANIVVEVEGKERGRAPLHLLEGIMCFGRIGASPALLAACAEAGIAFSYLSPIGRFLARVEGPRSGNVLLRRAQYRVADDNTRSVLIARYIVAAKVANQRTVIRRVLRDYGASSPEASQKALQAAEAWLTDTTRRIVKVTDMDSLRGIEGEAARVYFSVFNLFIRSEDPAFQFGGRSRRPPLDRVNALLSFLYALLGHDCRSALESVGLDPQVGFLHADRPGRTSLALDLMEEFRPVLADRLALNLINRAQVRAADFTCHEGGGITLHDDARKTVLTAWQERKKQEIRHPFLGETMTFGLVAHMQALLLSRYLRGELDAYPAFIWK
>NZ_CP011120.1|WP_006116162.1|950652_951300_+|CRISPR-associated-protein-Cas4
MMPKPDQRQDEENLVPVSALQHYLFCPRQCALIHIEQQWAENGATVEGRLLHERVDSGVPDRKRGVRTLRTLPIRSFALGIYGKADAVELHGTGSTLIPYPVEYKRGSPKPHHADEVQLCAQALCLEEMFGCAVSEGALFYDRPHRRTTVQFDQDLRDLTQKTAQKVQDMLAAGKTPQPVWNKGCKHCSLEAICQPRRLEKPLCVEKWFLENLED
>NZ_CP011120.1|WP_006116164.1|949698_950646_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MNKPVENRYEFVLYFDVTNGNPNGDPDAGNLPRLDPETNKGLVSDVALKRKVRNYISAVKEGDPGFEIYVSEGATLNVQNKKSWAAVMPDVTKDEEMKKLPKETEKALALTKWMCANFWDIRTFGAVMTTAVNAGQVRGPVQFAFARSVEPIVPLEISITRMAATTEADAEKKGGRTMGRKHIVPYGAYRVHGFVSAPLASHPVKGTGFSEEDLELLWSALLNMFELDHSAARGEMSARKLIVFKHASKLGNARAQDLFDRVKTFRTYQGSSYQVDHGSAQNPKMDNWPPARFWNDYAVVIDRENLPDGVEIIER
>NZ_CP011120.1|WP_063353782.1|947881_949702_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MTEQIQQGILQALVRFYDRMQNAPALGWSQVKFGWAIVLNESGHPVDVMDLRDQSGKKPANRFFMVPAEVKRTAGISPNFLWDKSSYVLGKTAGAGKRTAQEHAAFVKKNLERIAGVEDAGLLALKAFLENWSPERFESEPFQTDMLDANIMFRLDGDARYIHERPAARKLVEARALEADGPEDRIFCLVTGENSKPARLHPAIKGVEGAQIAGASLVSFNCDAFTSYGKAQGENAPTSEGAAFRYGAALNSMLQRGSLNRVARPIGDTTVVFWAEASDRQAAEAADAFGAIALSSDNKDDAEVEKVSETLKRVSRGEALHTIRPDLGEGTRFYVLGLAPNAARLSVRFWLCDTLDAFARNLAMHYQDIAVEPAPWRNLPSPFLLAVKTTAMLEKADNIPKRLVADILNAILTGRAYPRTWLSSVIMRLRAGDDPTGWHAAAARAVLQRMKRKINPTISEKESVPVSLNRDYPNIGYQLGRLFAVYELAQRAALGGVNTSMRDKYFGAASATPASVFPVIIRNGQNHLGVVRKKLAGWSVIIEKELEEIFNKISPEEPSSFPRSLHLEQQGEFALGYYHQRSAKLAGQKSNQSLPEIENDQEDEDA
>NZ_CP011120.1|WP_006116166.1|947204_947885_+|type-I-C-CRISPR-associated-protein-Cas5
MGIRLHIWGERACFTRPELKAERVSYDVITPSAARGILEAIHWKPAIRWHIDRIHVLKPIQFGSFRRNEVSAKANARNAATAMKAGTTAGLGLVAEENRQQRAAMILLDVAYVVEAHFTMTDRAGPDDNPAKHISTFNRRAERGQCFHRPCLGTREFPAEFQLLPEEAALPHSDFLLQTQAAGDVDLGWMLHDIDFTNGKISKFFRARIHNGIIDVPPFDSPELAA
>NZ_CP011120.1|WP_082823231.1|946394_946598_-|hypothetical-protein
MVCSCLKNAGWDVQATKQSDDQGADVFTNSTFSASAREAAATTGVYLIHHAQLVDTADKIFRHFKYS
>NZ_CP011120.1|WP_063354878.1|945693_946035_-|hypothetical-protein
MFPRLTNLGASSFGEDPELFGDTLFEVIEDAPRGHFLPFKQQAVNELRTLLAYSDVDLDRVSWAVLGMNPMADIEEPPNWGSFPSLRAFWSAVLHAFENDPEVRAGKEIDRNV
>NZ_CP011120.1|WP_063354877.1|944952_945294_+|hypothetical-protein
MFPRLTNLGASSFGEDPELFGDTLFEVIEDAPRGHFLPFKQQAVNELRTLLAYSDVDLDRVSWAVLGMNPMADIEEPPNWGNFPSLRAFWSAVLHAFENDPEVRAGKEIDPDM
>NZ_CP011120.1|WP_157884494.1|944648_944936_+|hypothetical-protein
MCVVKRPVVSFFTSKEDVERAIHKMLKDNGPRIDRWRKNAADGKVTQFDGYTSEKGTVVIESANRQRKAARHIQVTLIKKEHNGMSYYVQTVKLY
>NZ_CP011120.1|WP_063353784.1|953745_956139_+|CRISPR-associated-helicase/endonuclease-Cas3
MLYAHSLPETPDKKGWEPLLEHLECVARCAARFASPFGCAVLAEAAGLLHDLGKASEEYQDYISKQAAKGPDHSTAGAREAVARYGKIWGRLIAFVVAGHHAGLTNAFQSERWSSTPLNERLDPTSRIIPDYSRWSSLGLKLPEQADLKPTRIFQPAPDYPGFREFFLTHMLFSALADADCLETERFYAEAAGLPPPARGGQITRKHLENLRAEMAARCNQSTPLNRLRAEILEHAVGKASLAPGLFTLTVPTGGGKTLTSLSFALEHALKHGLRRVIYVIPYTSILEQTAEIFRDVLKSPDDILEHHSGFEWEKRAPDAERDSEHEGREGLDKLRRDAENWDAPIIVTTSVQFFESLFAAKKSRLRKLHNIAQSVVVLDEVQTLPVSLLRPCMAALDELARNYGTSLVLCTATQPALRKCDAALPALENGQAQGFDIDQQRELAPDPERLYATLKRVTVEWLDQPVTDEEIAARFSDCPQMLCIVNTRAHAQELFEAINNLPGARHLTTLMCPMHRRQVLAEIRQDLQQKKPVRLVSTSLIEAGVDVDFPEVWRAAAGLSSVAQAAGRCNREGRLDGLGRTVVFESLDARKTVDQDEGNGSSQKKNLRILRSMLPFWQATRTIRRKGVDPLSLKGMHLYYQELYFNQGYEALDAATLPSGKPGKAGEKYPILPAVQRTASGMNLPFATIASAFRMIDTALAPVIIQWDEDAAQVVKQLQFMPYPTPRILRTLQHYSVPVPPDVRMKLVMTGVCTLLHPEVFGDRFVVLERNNDLYSAQTGLRLDDPTWRSEESNIF
>NZ_CP011120.1|WP_157884495.1|956404_956635_-|hypothetical-protein
MTPEQFIKCLDILGISMRKLSEILGTHNTTVQRWSKGKQLIPNNLAEWLEAQAKFRLEHPLPKGWEENRVPPQEEL
>NZ_CP011120.1|WP_157884496.1|958259_958970_+|methyltransferase-domain-containing-protein
MTISNHHSYAEQWIKETDLLEANGIYEKLAAAVPLGRVLEIGCGAGKGTSQLIQQHEVLSLDNNPHLIDAARQNVCVASNVTIHECNLFTLTENDKKIISSFQPNAIVGWFLGGCGEDIFSKTEGVTELTEKAKLYREKLEDIIISEEILIDTVNTINLVYRGKKVSHLSDQEVKDSQAKNYNTYVFDQVGFKVTDVRLFDWPREGSDFTYGAAHNPNLVQGATNPIIISLIAQRT
>NZ_CP011120.1|WP_063353787.1|959306_959489_+|hypothetical-protein
MNYGIIQALTQTPPPEHIKAIANILKTKRGLDMVHIAAAKVIVLPKSVRLSMACPTGKAA
>NZ_CP011120.1|WP_063353788.1|959490_959943_+|hypothetical-protein
MTGSTIENKASTQKDDGLPPAPEGFSFKQGVCSINGTPTDTFEVKWTGADGLAHTASFRKKVPLGQRISAMESFGEQVTAEGRVGFLAAISAIDMDSIPEPPERGRNELLGFLDRLDDAGLMAWMRAKAEIAKSSEEQAEAAKVKATVGN
>NZ_CP011120.1|WP_063353790.1|960129_960609_+|hypothetical-protein
MAREFTEQGFLDYLASAPVRLEAQLKTAMKHEASHLQKEAREEVGHYQEAAGPFPAWSPLADSTMDDRIRKGFTPDDPGLRTGAMRDSYKASVEGNKIVLGSTSNAAQWFEEGTIKQPPRPVIGPAIFRNTETITRHLTESISAAMAGHITALESDVDD
>NZ_CP011120.1|WP_063353791.1|960601_962701_+|hypothetical-protein
MTETYTVRGEYLFITDAPQTLERITRGFAEAIRYGERYRSLLKEIGEQAFSLEKAGKYLKELNVAGLEGLLSSAKSATFSFDAVSSSIAKAREQIRLMAEESARLSFAEVTAPAPRNGARSGGSSGVGGGGASHKEPSYLRRAVGFDIPGYKSPGIATFVGGTALYETAKTSFDAYARTQQVYDIMLSDSRVRTDPAMMKVIQDSASDNLRKYKTLSPYDAARNSAEGYALSGGEKEEQPVITDLLGQIEENMILRGKSSEDAQQQARMIVSGMDIGNRFYNRKTGQLDLKRMYHEAEITQALVDVGGGFTTGRAIREFFKSTGTVGQDMSAVGLARAAHFIETNPQRASQAIGSFVSLFEGSAPTMRKRDKAWWTEHGLYGKNGRLSETADTLLHSDPIGFAEKYLGRFTRQQISEHTQRRNVGAILNEIQGSQGNIDRQAEAVARTDMNANHAALLGSPSGSVKVLDAAIARFMTTLGKFEAGPGVKILNQMTDGLDRMSNYMNAHPKDVATFMQEIGHIASALGSFVLFLGKVSAAIPSWLKPILFGGVSGAATASVVPGLGTGTGAVTGAATVGLDELANYLKQQDHKLNYDDGAPLTWKDKLDPFQWWHHRERYYAPPQDNLQPVNSVVRQPQQQPTQVTVNAPVYLDGKKIADNTQTYVMQEVQRTFDREMRASNSMPDPLSTPRVPGVPWGH
>NZ_CP011120.1|WP_157884497.1|962788_963445_-|hypothetical-protein
MDKDKKLSNATPKHIALAIISWLVCFSAAHATGQAKICAQRVAFNSSDYTQEYEYGPIIVPERAVFEWAGHSFAGPEDIRDTLHMASDPESERTWPSIPIAEEKRRHELTQEDTAPRHPLTTIITLKEATLTYSHPCALVPVSLFVTNDWGEEGKTINPDNIIVYQADGVWGNDHILTEEGTPKSFEANVQSGNINAIITRPVTEYFPAYSKEMQSGK
>NZ_CP011120.1|WP_063353793.1|963513_964560_+|AsnC-family-protein
MAKKLNLDLLNKIWTLAEQGTEGEQAAARNRAEALVKPHGYTLADVPDLLLTEGYLDDEPEPSAGGFTFYDMSNPAHQRAYARAERKRQVAWRMANRAKIDEVLARYGSEEAVFAHMAEEKAYDAAIKPFHKKGKAGQCDTWDGEHFGPTAKVRAALATVKPWPDTIPDAIVEYEYWEKLHDDRNIADGNNQYNYLSQGADFRYWALGDLINKEIEARNISDVIIRLRFQEASQGTYNDSAAILRNLERLHAEESLKPGISGAGDILLDRGFSVSSDGNAGDSENRATSPSNLDTATKRRAEVVRILQTAEGMRMPFRAVAQMVGVSPTTVGNIKRRIEKTVRQACRQ
>NZ_CP011120.1|WP_063353794.1|965161_965683_+|hypothetical-protein
MDAVVARIMADLQSLREAAKRQSARIDALETLYEQQKKKREDICEKIKDLENFLVYYEHYTAAGKHLPNHGYRRPVMKGGEPNKRPGLRPQSRAGKIEKVAIRAIQKAERPLSIGELLSAINNAGFEIHGARPRTNLASILSRSQKIYYDHPDGWKFASDYNPEIDVHLKNTK

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Crispr_ID: NZ_CP011120_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011120_2

2591518-2591746

Orphan

Consensus_repeat	Method
ACATTCTTTTCCGCGTTGGTTACACGGTCGCGCTGAGCCTGTAGCTTCTCACGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011120_2

>merge|NZ_CP011120|2|2591518-2591746|CRISPRCasFinder
ACATTTTTTTCTGCATTGGTTACACGGTCGCGTTGAGCCTGCAGCTTCTCACGTGCTTCCTCACCACTGTTGTTCCAGCGGTCACGCACATTCTTTTCCGCGTTGGTTACACGGTCGCGTTGAGCCTGCAGCTTCTCACGCGCTTCCTCACCACTGTTGTTCCAGCGGTCACGTACATTCTTTTCCGCGTTGGTTACACGGTCGCGCTGAGCCTGTAGCTTCTCACGTG

>NZ_CP011120|2|2|2591518-2591746|CRISPRCasFinder
ACATTTTTTTCTGCATTGGTTACACGGTCGCGTTGAGCCTGCAGCTTCTCACGTG	CTTCCTCACCACTGTTGTTCCAGCGGTCACGCACATTCTTTTCCGCGTTGGTTACACGGTCGCGTTGAGCCTGCAGCTTCTCACGCGCTTCCTCACCACTGTTGTTCCAGCGGTCACGT
ACATTCTTTTCCGCGTTGGTTACACGGTCGCGCTGAGCCTGTAGCTTCTCACGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011120.1\|WP_063354690.1\|2582638_2583388_-\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|235617
NZ_CP011120.1\|WP_063354691.1\|2583443_2583746_-\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP011120.1\|WP_006115060.1\|2597307_2598024_-\|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl\|CDD\|273990
NZ_CP011120.1\|WP_063354692.1\|2583865_2584795_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP011120.1\|WP_063354703.1\|2600994_2602863_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP011120.1\|WP_063354695.1\|2586955_2587357_-\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|319965
NZ_CP011120.1\|WP_003624653.1\|2593899_2594388_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP011120.1\|WP_003624142.1\|2582358_2582583_-\|ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|349422
NZ_CP011120.1\|WP_063354701.1\|2598868_2599744_-\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|183065
NZ_CP011120.1\|WP_063354698.1\|2595076_2596408_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_006115408.1\|2589593_2591348_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP011120.1\|WP_063354696.1\|2587402_2589472_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011120.1\|WP_063354979.1\|2581727_2582309_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|169692
NZ_CP011120.1\|WP_063354700.1\|2598041_2598872_-\|phosphate-ABC-transporter-ATP-binding-protein-PstB	unknown	unknown	gnl\|CDD\|182692
NZ_CP011120.1\|WP_063354702.1\|2599746_2600730_-\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|183070
NZ_CP011120.1\|WP_063354699.1\|2596407_2597280_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187579
NZ_CP011120.1\|WP_063354694.1\|2586037_2586850_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP011120.1\|WP_063354697.1\|2592240_2593833_+\|peptidase-S10	unknown	unknown	gnl\|CDD\|225490
NZ_CP011120.1\|WP_006115057.1\|2594393_2594870_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP011120.1\|WP_063354693.1\|2584796_2586041_-\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	unknown	unknown	gnl\|CDD\|273704

Protein	Function_ID	Function_description	E-value
NZ_CP011120.1\|WP_063354690.1\|2582638_2583388_-\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	2.82752e-59
NZ_CP011120.1\|WP_063354691.1\|2583443_2583746_-\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	2.01242e-13
NZ_CP011120.1\|WP_063354692.1\|2583865_2584795_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	1.09341e-178
NZ_CP011120.1\|WP_063354703.1\|2600994_2602863_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP011120.1\|WP_063354695.1\|2586955_2587357_-\|lactoylglutathione-lyase	gnl\|CDD\|319965	cd16358, GlxI_Ni, Glyoxalase I that uses Ni(++) as cofactor. This family includes Escherichia coil and other prokaryotic glyoxalase I that uses nickel as cofactor. Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event.	6.15107e-25
NZ_CP011120.1\|WP_003624653.1\|2593899_2594388_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.21987e-80
NZ_CP011120.1\|WP_003624142.1\|2582358_2582583_-\|ATP-synthase-subunit-C	gnl\|CDD\|349422	cd18182, ATP-synt_Fo_c_ATP5G3, ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins. ATP5G3 (also called ATP synthase lipid-binding protein, ATP synthase proteolipid P3, ATP synthase proton-transporting mitochondrial F(o) complex subunit C3, ATPase protein 9, or ATPase subunit c) transports protons across the inner mitochondrial membrane to the F1-ATPase protruding on the matrix side, resulting in the generation of ATP.	1.45032e-17
NZ_CP011120.1\|WP_063354701.1\|2598868_2599744_-\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|183065	PRK11268, pstA, phosphate ABC transporter permease PstA.	9.98762e-112
NZ_CP011120.1\|WP_006115060.1\|2597307_2598024_-\|phosphate-signaling-complex-protein-PhoU	gnl\|CDD\|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	3.06178e-70
NZ_CP011120.1\|WP_006115408.1\|2589593_2591348_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	2.50627e-121
NZ_CP011120.1\|WP_063354979.1\|2581727_2582309_-\|hypothetical-protein	gnl\|CDD\|169692	PRK09174, PRK09174, F0F1 ATP synthase subunit B.	8.37273e-21
NZ_CP011120.1\|WP_063354700.1\|2598041_2598872_-\|phosphate-ABC-transporter-ATP-binding-protein-PstB	gnl\|CDD\|182692	PRK10744, pstB, phosphate ABC transporter ATP-binding protein PstB.	0
NZ_CP011120.1\|WP_063354702.1\|2599746_2600730_-\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|183070	PRK11275, pstC, phosphate ABC transporter permease PstC.	6.73934e-92
NZ_CP011120.1\|WP_063354699.1\|2596407_2597280_+\|hypothetical-protein	gnl\|CDD\|187579	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs. This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.97686e-18
NZ_CP011120.1\|WP_063354694.1\|2586037_2586850_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	1.02721e-115
NZ_CP011120.1\|WP_063354697.1\|2592240_2593833_+\|peptidase-S10	gnl\|CDD\|225490	COG2939, COG2939, Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism].	1.59594e-64
NZ_CP011120.1\|WP_006115057.1\|2594393_2594870_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.16608e-88
NZ_CP011120.1\|WP_063354693.1\|2584796_2586041_-\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	gnl\|CDD\|273704	TIGR01579, MiaB-like-C, MiaB-like tRNA modifying enzyme. This clade of sequences is closely related to MiaB, a modifier of isopentenylated adenosine-37 of certain eukaryotic and bacterial tRNAs (see TIGR01574). Sequence alignments suggest that this equivalog performs the same chemical transformation as MiaB, perhaps on a different (or differently modified) tRNA base substrate. This clade is a member of a subfamily (TIGR00089) and spans low GC Gram positive bacteria, alpha and epsilon proteobacteria, Campylobacter, Porphyromonas, Aquifex, Thermotoga, Chlamydia, Treponema and Fusobacterium. [Protein synthesis, tRNA and rRNA base modification].	2.62061e-148

>NZ_CP011120.1|WP_006115408.1|2589593_2591348_+|DEAD/DEAH-box-helicase
MPFQNAPAPLARALAARGFTAPTAVQAAVLADDAKNRDLLVSARTGSGKTVAFGLTLADLLLNDAGRCVPSGAPIALVIAPTRELALQVRSELEWLYAETGARIVSCVGGMEPRKEARALASGCHIVVGTPGRLCDHLRRGALDLSHLKAVVLDEADEMLDLGFRDELETLLDAMPKERRTLLFSATIARDIAALARRYQQDALRIDTVGTNTPHADITYRAVLTEQGDMAGTVVNVLRLMESSAAIVFCHTREAVRQLQAILTERGFSSVAISGDLGQNERSRAIESLRHGQARVCVATDVAARGIDIPDLGLVIHASLPSNPATLLHRSGRTGRAGKKGTCVLLVPPARRRLAERLLQAAKVTAEWSGAPTPAAIATADAERLLAAPFLSAPAPEDAETQTLISRLAAEHTPEQLGAALVGLWHKSLPAPVSVRVLTPDARRAAPRERDPNRPVRERERAPAMDGKWFRLSVGREDRADPKWLVPMLCRLGNIKKQDIGSIRITQDHTLVEISPDKAEQFASCASATDPDEITVEPAAAPRKGGGGGSRPAYADRKPKGGRSFAPRREGASKSNSSRKRKPK
>NZ_CP011120.1|WP_063354696.1|2587402_2589472_+|hypothetical-protein
MLNAHLFSLKLFFKERALYGKARKMVHIHIRTTSTIFEKRMRIFRQFSCRMAHHIKTGLCMGTVLASGGMAMNYAFPAYAAADDAASLDALEQQISRIQAEQHELQKALVSVQKQIAQRRGTAHASNGNSSTGRAVSGSHHAVANSGSGSGVTVAMQDGTIASTASTDPGISAPASTRSGGSLRHAMGPDAQPVFSGKNDTPEVESVVGHRAEDMIARIADNQVGAHQRETAGAQAAGALGDHGVFHLGPLTLILGGFLDAAAVESNRHTSTGTFNYWADMPYKGDARYHTDNFEGSARYSRISLMARGNIDKNSTISGFYEMDFGAGASTTDPYESNSYTFRMRQLYMAYDNSALNFHFLAGQAWSMLTPGRVGIIPRQENLPLTIESSMLAGQTWARQLQFRFVKDFFQHRLWAGLSIENSATLYNVDSFSSVTDGQVRLPNGRIATIGYDGTGLTNNALFPNEIAPDIIGKLAWDPHWGHYEVEGILHFPHTRVSELGGGRNHTAIAGGGGGSVVLPVLPHKVEVRLAGLAGVGIGRYGSVLLPDATLNSKGEPSPIPSIQGTAGIIAHPNQLIDVYGYFGYQQAGRRYFNANGSAYGYGNPSFDNSGCNVEMATELSTLGCTGNTRSVMEATVGAWYRFFKGHYGTVEAGLQLAYSRRKAWEGLGGAPSAGMSQVFMDFRYLPFQ
>NZ_CP011120.1|WP_063354695.1|2586955_2587357_-|lactoylglutathione-lyase
MAKMIHSMLRVLDEARSTHFYADTLGIKPVGRFEFESFTLVYLANDEQTFELELTINHGRTEPYNLGEGYGHLAVSVADVQREHARMEAAGHPVTPVKTLENKGHVVGQFFFLTDPDGYKIEVLQRGAPGRFV
>NZ_CP011120.1|WP_063354694.1|2586037_2586850_-|diaminopimelate-epimerase
MLTSFRKMHGLGNDFVILDERGGHLPLTPARIAALAHRHRGIGCDQLVTLRPACAEGADVFVRFFNPDGSEAGACGNASRCVADLIWRETDNRTPVLQTRAGRLPARIEENGLITVDMGEPRLNWQDVPLVAEMDTLHLPLEGDPAAASMGNPHATFFVEDFARLSQGQALEHDPLFPERANIGFARIDGSARMRLKVHERGAGVTEACGSGACAAVVNAARRGLVERVCEVELDGGILQIEWAPNNHVLMTGSATTAFEGTVDLAAYPE
>NZ_CP011120.1|WP_063354693.1|2584796_2586041_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB
MSKPEILTFGCRLNTWESEVMRNHASSLDNVIIVNTCAVTGEAERQARQAIRRAHRENPDARIVVTGCAAQINPESWSDLPGVARVLGNEEKLKAESWSAAALSQPLAVSDIMAAKETAAHLVTEFAGRTRAFVQVQQGCNHRCTFCIIPFGRGPSRSVPVGAVVEQVRALVQSGYREVVLTGVDMTSWGEDLPGKPVLGQLCRRVLRLVPELERMRLSSVDPVEIDEDIWQLLAEEPRFMPYLHLSLQAGSDLILKRMKRRHLVADAARVVERARSLRPDIGIGADIIAGFPTEDESLFEETRNFLAQQALPYLHVFPYSERPGTPAARMRAVPVPERKARAAQLREVGAVSAARYYESLIGQPLRVLMETPTTGHSEQFAPVRLAQGEAEVGEIITLQPTMADKAGLVVERI
>NZ_CP011120.1|WP_063354692.1|2583865_2584795_-|signal-recognition-particle-docking-protein-FtsY
MALGFFSRLKQGLSRSTQKLGGGITGIFTKRKLDDEALEELEDLLITADMGPAVAERIIESFRSSRFGTEVTDEEIRTTLADEIAAILKPVAKPFEPDPEHKPHVVLVVGVNGVGKTTTIGKMARFFTEEGKKVMMVAGDTFRAAAVEQLQIWGERTGCPVIAGPPGADAAGLAFEALKRGKAEGADLLFVDTAGRLHNKSALMEELAKIIRVMRKFDETAPHSVLLVLDATTGQNAVEQVRVFRELVNVTGLVVTKLDGSARGGIVVALADQFGLPVHAVGVGEQAEDLRPFSAVDYARGLVGVTDTV
>NZ_CP011120.1|WP_063354691.1|2583443_2583746_-|AtpZ/AtpI-family-protein
MSKNGNDSFDARLKAAERRSGLEKKEDSAEKEDAVEQSLPGLALRAGAEMLSALIVGVAIGWELDHWLKTRAVFLIIFALMGGGAGVLNVWRLVKSIDGK
>NZ_CP011120.1|WP_063354690.1|2582638_2583388_-|F0F1-ATP-synthase-subunit-A
MAGGSSINVLEQFELHPVLGGLGEALRFSQSPLYMIVAVCLVLAFLYFGMRPAAVVPGRLQAAAEVCYEFIHNMAVDTIGPEGTAFFPFIFTLFFFILAGNYIGLLPFSFTFTSHIAVTFALAMMVFVLTVIVSLKVQGLHFFAHFMPEGASPFLAPLLIPIEILSFLSRPVSLSIRLFANMVAGHVMFDIFASFVVMLAGFGVVGDVFAVGPIAINVALMALELLVGVLQAYVFAILTCIYLREAVAH
>NZ_CP011120.1|WP_003624142.1|2582358_2582583_-|ATP-synthase-subunit-C
MDIAAAREIGAGIAVIALAGVGIGLGNIFSTLVSSIARNPASRPHVFGLGMLGFALTEAIALFALLIAFLILFV
>NZ_CP011120.1|WP_063354979.1|2581727_2582309_-|hypothetical-protein
MLRAGLFATVSGVSLLAVSAPGAYATGMPQLDFANPLVTGQVMWGAVIFFVFYMVLSKAMLPGIARVLEDRSKRISGDLEIARAAKQDADKAVAELQQARKDAMAEAQAHLDQVLAEEHKAAEQQMQEINARVTAEIADAEKRVAEEKMRALSALKEIAGDTTQALVQRLTGIVPDAQLVAQKVESASAHSTI
>NZ_CP011120.1|WP_063354697.1|2592240_2593833_+|peptidase-S10
MRIVMKPVFHPAKWPNFNKLKLAGSLTVALSLSTTAIAATEPSPPPAKAAPSVTGPAPAQIQTDTFHNAAALLPQDAITHHTGIFDKRKISYTAHTGTLTLRDDDGAPTARVFYVAYTQDGVDPAHRPVAYFFNGGPGAGTAYLHLGAAGPSILSFPNGNPADGANAQLTPNTESWLAAADLVFIDAPGTGWSIPTDAKKAAKTFYGVKQDAHAFAKAIQLWAQSNNRQISPRYLVGESYGGLRAIEVADALAQDQNILVNGIIMISPALDMTLLDTSNDILATSFVLPSLEASQLALQHKLTPENAAGHLDSAYHYAIGPYLSTLANAPLAGNAAQDFYEDVATHSGIPLETVAKERGMLQPEAHDVRSRNGRLYSLYDGTFSIADPFPEGVENGASPDPILDGFTRAYGSAFEQYAATSLNFRTSLSYSLLNMKVNEEWDYRDGGSPIVRPIPTLRRLLALNPTLRVFIANGYYDLVCPFASSRWVAEHIPVGRNRIALHTYPGGHMIYIRADSRAALAQDAKTFMTP
>NZ_CP011120.1|WP_003624653.1|2593899_2594388_-|30S-ribosomal-protein-S9
MSETQERTGTLADLKTVVPEIASDAPVYEAKRDAQGRSYATGRRKDAVARVWIKPGKGEITVNGRPVGTYFARPVLRMLLTQPFLVSDRYNQFDVVCTVTGGGLSGQAGAVRHGISRALTHYEPELRSILKAAGFLTRDSRKVERKKYGRAKARRSFQFSKR
>NZ_CP011120.1|WP_006115057.1|2594393_2594870_-|50S-ribosomal-protein-L13
MKTTLSLKPAEVTKNWILIDAEGLALGRLAVIIAQRLRGKHKPQFTPHVDCGDHVVVINAEKVALTGRKADQKLFHYHTGYPGGIKERTVKQRLEGKNPGQLVEKAVERMITRGPLQRQQMRSLHVYAGAEHPHAGQNPQQLDVAAMNRKNVVNVQKG
>NZ_CP011120.1|WP_063354698.1|2595076_2596408_+|hypothetical-protein
MKKNVLVMISGIAILGGIGWLGARHAEHLMLDKSIERFRQTLGPDASFTYKKATPGVLGRSVKFTSLVFRQGPETITADEAEVSKPVTKGSESPLIEHLSFRNFQMADTAGSLHLAKLAMEGVTLPVKEDVHTPAHTLSIQHAEATKLHGFIDSLQSDISADTVTVDDFGESMASHLEATKLQFSADVPPARHVSADHVGIDGLDLAGLYNSLTTGAAYTARNGTRDIQIDHLAIDGDSPLLRAVKILSHSSKSESAEQEVSSVQDAELWPSMPNLAWLPTLGYDRLHASLVLNDTHDLKTDKLHIEELSIDAAQMGRLHLDGDFAQAGSHAVVAANADMQVLHMHMNYMDHGLVPKILDQAAKARNMNLHDMLATWQEQTKQGNNPILTQALTYALHPEKGPLDIYIQPQRPLPLMTVLASLGAVGVAPQIAQQVGLSLHTP
>NZ_CP011120.1|WP_063354699.1|2596407_2597280_+|hypothetical-protein
MLPLHTLQPALGPVHVIGASGRSGRAVCQALLAQGIPIIPVVRNASRADGLENIRIADLTAPTELLKPVLVDATRIVCTAHARNIPALLAAAPASAKLVCLGSTRKFTHWPDAHGNGVLLGEKALMASGRDSIILHPTMIYGAQGENNVQRLAALLRFLPVIPLPNGGTALVQPIWQGDVTASILAALAQTWHGPRSLVIAGKNAVTYKQFVTLVEQASGLRPRPFISLPAKLLMACAHVTSRIPGLPEIGPDEIRRLLENKNFDISPMQRFLGVQPIDLQEGLARTFKG
>NZ_CP011120.1|WP_006115060.1|2597307_2598024_-|phosphate-signaling-complex-protein-PhoU
MGNEPAHTVTRYDQELDRLRGIVARMGGLVERQTAQAIAAVVDQDEEAAIEPPELDTEVDALEREAEMLAIRILALRAPMAVDLRMIVAVLKMSGDLERIGDYASSIARRAMKVEPLDGAFSFSPLRAMARLVQENLHKAIEAMVENDSTRAMEVWNADTAVDELYTAMFRELVTYMMEDPRKIGPCIHLLFVAKNLERIGDHATNIAERVYYAVTGNMLPAVRPRGGAARKDTHKES
>NZ_CP011120.1|WP_063354700.1|2598041_2598872_-|phosphate-ABC-transporter-ATP-binding-protein-PstB
MSIEVQTETVAAEQTVTVAETEKDARPIALQVRDLNFYYGKSHALHDISLNFPERSVTGMIGPSGCGKSTLLRVLNRMYDLYPGQKATGEVIFDGQNILAAGVDLNVLRSRIGMVFQKPTPFPMSIYDNIAFGIRLHERVSRSEMDGRVEDALRRVALWSEVQDRLSSSATAMSGGQQQRLCIARTIAVRPEVILLDEPTSALDPVSTARIEELLDELKTEFTIAIVTHNMQQAARCADQVAFFYMGKLIEVDSTARMFTTPREQQTQDYITGRFG
>NZ_CP011120.1|WP_063354701.1|2598868_2599744_-|phosphate-ABC-transporter-permease-PstA
MATSRSLLRSDRSASLLLRRKVTDRMATGLSWLAMLIVVCVLGSILWTLFKNGLAGLSINLFIHSMAAPGQNGGLANAIMGSILQTGLAILLGTPAGLLTGIYLAEYGTNSVLARTVRFVSDMLLSAPSILIGLFIYMVLVAPLGHFSGYAGSLALAILAMPIVVRTTEDMLYLVPVAMREAGIALGAPKWRVILFICLRAARGGILTGVLLAVARVAGETAPLLFTSLGNSEWSVDMNRPMASLPVAIYQYAGSAYQDWMQQAWTGALLVTLGVLIINIVVRVGTRGGRT
>NZ_CP011120.1|WP_063354702.1|2599746_2600730_-|phosphate-ABC-transporter-permease-subunit-PstC
MEISARQPLPATKKNHPAGGVRTADPFFRMLVIATGVGVLVVLGAIIGVMAVGGWKAFAVFGPEFLISAVWNPVTQHFGAAAPVFGTIVSSAMALVVAVPLAFGTAFWLAALAPPAAAAFIGMAVQLLAAVPSIIFGMWGFFVVVPLVAHYVQPTARHLFGHVPGLSALVAGAPFGTGLFTASLILAIMITPSITAVMRDVFVSMPTVLRESAYGLGATRWEVMRNVVLPWSRQGVIGAVVLGMGRAMGETMAVTFVIGDSNHIGWSLFAPANTIASLIALEFPESPAGSLKLASLMALGAILMAISFLTLWFSRWLLARGQKAAGG
>NZ_CP011120.1|WP_063354703.1|2600994_2602863_+|dihydroxy-acid-dehydratase
MAGYRSRTTTHGRNMAGARSLWRATGMKDSDFGKPIIAVANSFTQFVPGHVHLKDMGQLVCQSIAEAGGIGREFNTIAVDDGIAMGHGGMLYSLPSRELIADAVEYMVNAHCADALVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGRVTLADIEQRADLVTSMVSAANPNVSDADSLAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSLVATHSARRGLFVEAGQRIVDMARRYYEQDDTSVLPRSIATMDAFENAMSVDIAMGGSTNTVLHLLASAHEGDVPFTMKDIDRLSRKVPHLCKVSPSRPDVHMEDVHRAGGIPAIMGELDRLGLLHRDVPMVHAANLPEALKNWDIRAPGAETNTTARDFFRASPGGVRTTEAFSQSSQYHELDMDTENGAIRNGAHAYNQDGGLAVLYGNLAEDGAIVKTAGVAAGLETFSGPARIFESQDAAVSAILGDKIKPGDVVLIRYEGPKGGPGMQEMLYPTSYLKSKGLAEKCALITDGRFSGGSSGLSIGHISPEAAEGGVIGLVEEGDIIEIDIPNRKLAVAVPESELSDRRARMDDLGDQAWQPKRDRVVSNALKAYAALTTSAARGAVRDVSQLTRRTPR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011120_1	1.8\|953404\|36\|NZ_CP011120\|PILER-CR,CRISPRCasFinder,CRT	953404-953439	36	MH622937	Myoviridae sp. isolate ctcg_2, complete genome	33911-33946	3	0.917
NZ_CP011120_1	1.7\|953339\|33\|NZ_CP011120\|PILER-CR,CRISPRCasFinder,CRT	953339-953371	33	NZ_AP017960	Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence	16610-16642	8	0.758

1. spacer 1.8|953404|36|NZ_CP011120|PILER-CR,CRISPRCasFinder,CRT matches to MH622937 (Myoviridae sp. isolate ctcg_2, complete genome) position: , mismatch: 3, identity: 0.917

tctcctgcgcgggtgttccatgcggtgattgcttga	CRISPR spacer
tctcctgcgcgggtgttccatgcggtgatggcttct	Protospacer
***************************** ****

2. spacer 1.7|953339|33|NZ_CP011120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017960 (Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 8, identity: 0.758

ggtggcaatatcgactggctgaaagaggcgttt	CRISPR spacer
gttggcactctcgactggctgaaagatggagtg	Protospacer
* ***** * **************** * . *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

377339 : 392349

Aeromonas_phage(45.45%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063353456.1\|377339_377804_+	hypothetical protein	F8TUR4	EBPR_podovirus	1.4e-18	41.4
WP_063353457.1\|377784_379269_+	hypothetical protein	A0A1Y0T3N1	Sinorhizobium_phage	5.4e-77	39.8
WP_063353458.1\|379268_380759_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.4e-104	43.0
WP_082823104.1\|380755_381586_+	hypothetical protein	H9C0V1	Aeromonas_phage	1.6e-46	37.3
WP_063353459.1\|383028_383529_+	hypothetical protein	A0A220NQI9	Acinetobacter_phage	2.0e-28	45.1
WP_063353460.1\|383528_384569_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	4.1e-79	46.0
WP_063353461.1\|384572_384911_+	hypothetical protein	NA	NA	NA	NA
WP_063353462.1\|384920_385337_+	DUF4054 domain-containing protein	H9C0W0	Aeromonas_phage	1.1e-14	42.2
WP_082823105.1\|385327_385906_+	hypothetical protein	A0A2H4P6T2	Pseudomonas_phage	1.2e-24	45.6
WP_082823106.1\|385905_386304_+	hypothetical protein	NA	NA	NA	NA
WP_063353463.1\|386240_386804_+	hypothetical protein	NA	NA	NA	NA
WP_063353464.1\|386800_387958_+	DUF3383 family protein	H9C0W5	Aeromonas_phage	1.8e-35	36.4
WP_063353465.1\|387960_388398_+	hypothetical protein	Q8HAQ5	Burkholderia_phage	1.3e-10	38.4
WP_157884473.1\|389005_389173_-	hypothetical protein	NA	NA	NA	NA
WP_167348728.1\|389263_389410_-	hypothetical protein	NA	NA	NA	NA
WP_157884474.1\|389429_389642_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_157884475.1\|389725_389929_-	hypothetical protein	NA	NA	NA	NA
WP_157884476.1\|390354_392349_+	hypothetical protein	H9C0W9	Aeromonas_phage	9.7e-21	29.0

DBSCAN-SWA_2

398131 : 407266

Acinetobacter_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157884483.1\|398131_398863_+	hypothetical protein	A0A220NQH2	Acinetobacter_phage	5.3e-09	26.8
WP_063353477.1\|398862_399171_+	hypothetical protein	K4I3B0	Acinetobacter_phage	1.7e-09	38.5
WP_157884484.1\|399163_400129_+	hypothetical protein	H9C0X5	Aeromonas_phage	2.8e-13	24.3
WP_063353478.1\|400145_400745_+	hypothetical protein	A0A2R3UAK1	Myoviridae_environmental_samples	1.4e-28	41.0
WP_063353479.1\|400840_401197_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	2.3e-13	36.0
WP_082823109.1\|401123_402407_+	hypothetical protein	H9C0X9	Aeromonas_phage	4.9e-66	40.1
WP_063353481.1\|402408_402984_+	DUF2612 domain-containing protein	Q2NPA3	Xanthomonas_phage	9.6e-30	39.9
WP_063353482.1\|402983_404225_+	hypothetical protein	NA	NA	NA	NA
WP_157884485.1\|404761_407266_+	hypothetical protein	A0A166Y926	Gordonia_phage	2.4e-08	39.8

DBSCAN-SWA_3

437141 : 452526

Stx2-converting_phage(25.0%)

tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063353329.1\|437141_438752_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.6e-112	42.6
WP_020944072.1\|438815_439163_-	IS66 family insertion sequence element accessory protein TnpB	S5WJH4	Leptospira_phage	3.5e-11	45.2
WP_063353330.1\|439159_439519_-\|transposase	transposase	NA	NA	NA	NA
WP_063353501.1\|441139_441865_+	hypothetical protein	NA	NA	NA	NA
WP_063353502.1\|441871_442960_+\|tail	tail fiber domain-containing protein	NA	NA	NA	NA
WP_006116898.1\|442959_443367_+	hypothetical protein	NA	NA	NA	NA
WP_157884486.1\|443321_444764_+	hypothetical protein	NA	NA	NA	NA
WP_063353503.1\|444813_445320_+	hypothetical protein	NA	NA	NA	NA
WP_063353504.1\|445316_445748_+	cell wall hydrolase	W6MVH4	Pseudomonas_phage	2.5e-22	47.2
WP_063353505.1\|445904_446273_+	hypothetical protein	NA	NA	NA	NA
WP_063353506.1\|446269_446650_+	hypothetical protein	NA	NA	NA	NA
WP_063353507.1\|446651_446852_+	hypothetical protein	NA	NA	NA	NA
WP_063353508.1\|446906_447671_-	hypothetical protein	NA	NA	NA	NA
WP_063353509.1\|448066_448279_+	hypothetical protein	NA	NA	NA	NA
WP_012812328.1\|448941_450192_+\|transposase	IS701-like element IS1452 family transposase	NA	NA	NA	NA
WP_157884487.1\|450383_451146_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.2e-11	31.6
WP_012812328.1\|451275_452526_-\|transposase	IS701-like element IS1452 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

601870 : 620460

Rhodobacter_phage(22.22%)

terminase,portal,capsid,head,tail,integrase

attL 599822:599836|attR 622718:622732

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
599822:599836	attL	NA	NA	NA	NA
WP_063353588.1\|601870_602545_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_063353589.1\|602584_602833_-	hypothetical protein	NA	NA	NA	NA
WP_063353590.1\|602834_604184_-\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	1.4e-63	36.5
WP_063353591.1\|604184_605144_-	S49 family peptidase	I3ULZ8	Rhodobacter_phage	2.4e-65	47.6
WP_063353592.1\|605145_606423_-\|portal	phage portal protein	I3ULZ7	Rhodobacter_phage	5.5e-110	49.8
WP_063353593.1\|606425_608150_-\|terminase	terminase large subunit	A0A141GEV8	Brucella_phage	4.0e-156	51.3
WP_063353594.1\|608152_608614_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	4.7e-19	32.9
WP_082823115.1\|608814_609135_-	HNH endonuclease	Q3HR06	Burkholderia_phage	3.5e-05	31.6
WP_063353596.1\|609205_609688_-	hypothetical protein	NA	NA	NA	NA
WP_162269448.1\|609684_610587_-	hypothetical protein	NA	NA	NA	NA
WP_063353598.1\|610625_610913_-	hypothetical protein	NA	NA	NA	NA
WP_063353599.1\|610909_612439_-	hypothetical protein	O80281	Escherichia_phage	6.3e-44	29.9
WP_063353600.1\|612431_612878_-	transcriptional regulator	NA	NA	NA	NA
WP_063353601.1\|612870_613119_-	hypothetical protein	NA	NA	NA	NA
WP_063353602.1\|613299_613779_-	hypothetical protein	A0A0A8IL22	Aurantimonas_phage	2.5e-07	35.9
WP_035351168.1\|613876_614119_+	hypothetical protein	NA	NA	NA	NA
WP_063353603.1\|614092_614617_-	hypothetical protein	NA	NA	NA	NA
WP_116100194.1\|614613_614940_-	hypothetical protein	NA	NA	NA	NA
WP_064776463.1\|614936_615188_-	hypothetical protein	NA	NA	NA	NA
WP_050819274.1\|615272_615914_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_157884490.1\|615918_616179_+	hypothetical protein	NA	NA	NA	NA
WP_063353604.1\|616393_616909_+	hypothetical protein	NA	NA	NA	NA
WP_063353605.1\|617261_617474_+	hypothetical protein	NA	NA	NA	NA
WP_035353160.1\|617470_617767_+	hypothetical protein	NA	NA	NA	NA
WP_063353606.1\|617742_618090_+	hypothetical protein	NA	NA	NA	NA
WP_063353607.1\|618086_618326_+	hypothetical protein	NA	NA	NA	NA
WP_063353608.1\|618322_618607_+	hypothetical protein	NA	NA	NA	NA
WP_063353609.1\|618603_618789_+	hypothetical protein	NA	NA	NA	NA
WP_063353610.1\|618785_619151_+	hypothetical protein	NA	NA	NA	NA
WP_063353611.1\|619147_619405_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_082823116.1\|619404_620460_+\|integrase	tyrosine-type recombinase/integrase	A0A291AUF0	Sinorhizobium_phage	6.0e-46	34.2
622718:622732	attR	NA	NA	NA	NA

DBSCAN-SWA_5

655400 : 675658

Aeromonas_phage(40.0%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063353633.1\|655400_656855_+\|terminase	phage terminase large subunit	A0A1X9SGU8	Bradyrhizobium_phage	5.5e-106	46.0
WP_035354328.1\|656851_657904_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_082823118.1\|657918_658137_+	hypothetical protein	NA	NA	NA	NA
WP_063354856.1\|658150_659527_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	4.5e-86	44.0
WP_063353634.1\|659528_660530_+	DUF2213 domain-containing protein	A0A2R3UAL3	Myoviridae_environmental_samples	9.8e-30	36.4
WP_063353635.1\|660568_661069_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	1.5e-31	48.1
WP_035354206.1\|661068_662106_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	6.9e-79	46.7
WP_063353636.1\|662152_662470_+	hypothetical protein	H9C0V9	Aeromonas_phage	2.7e-10	38.4
WP_063353637.1\|662506_663013_+	DUF4054 domain-containing protein	H9C0W0	Aeromonas_phage	1.9e-13	44.0
WP_063353638.1\|663003_663384_+	hypothetical protein	NA	NA	NA	NA
WP_063353639.1\|663344_663917_+	hypothetical protein	NA	NA	NA	NA
WP_063353640.1\|663935_665090_+	DUF3383 family protein	H9C0W5	Aeromonas_phage	4.3e-29	34.2
WP_006117079.1\|665092_665530_+	hypothetical protein	NA	NA	NA	NA
WP_063353641.1\|665569_666025_+	hypothetical protein	NA	NA	NA	NA
WP_162269444.1\|666060_666210_+	hypothetical protein	NA	NA	NA	NA
WP_063353642.1\|666194_667232_+	hypothetical protein	NA	NA	NA	NA
WP_063353643.1\|667267_667981_+	hypothetical protein	NA	NA	NA	NA
WP_063353644.1\|667977_668298_+	hypothetical protein	A0A191ZDK0	Acinetobacter_phage	6.3e-07	36.2
WP_063353645.1\|668294_669221_+	hypothetical protein	Q2NP99	Xanthomonas_phage	9.1e-14	30.0
WP_063353646.1\|669217_669907_+	hypothetical protein	H9C0X6	Aeromonas_phage	2.2e-36	48.3
WP_006117087.1\|669918_670272_+	hypothetical protein	NA	NA	NA	NA
WP_063353647.1\|670258_671494_+	hypothetical protein	A0A2R3UAL9	Myoviridae_environmental_samples	9.5e-59	38.5
WP_063353648.1\|671493_672072_+	DUF2612 domain-containing protein	Q6UIZ7	Burkholderia_virus	1.3e-29	38.6
WP_035354193.1\|672079_673177_+	hypothetical protein	A0A077KC23	Edwardsiella_phage	3.8e-11	33.8
WP_063353649.1\|673183_673753_+	hypothetical protein	NA	NA	NA	NA
WP_035354323.1\|673876_674323_+	hypothetical protein	NA	NA	NA	NA
WP_035354190.1\|674395_675658_+	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	1.2e-29	38.7

DBSCAN-SWA_6

1682922 : 1754758

Burkholderia_phage(23.08%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063354180.1\|1682922_1685412_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_063354181.1\|1685980_1686760_-	siderophore-interacting protein	NA	NA	NA	NA
WP_063354182.1\|1686788_1687406_-	DUF1442 domain-containing protein	NA	NA	NA	NA
WP_063354183.1\|1687435_1688026_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_063354184.1\|1688327_1690688_+	TonB-dependent receptor	NA	NA	NA	NA
WP_063354185.1\|1690861_1692442_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_063354186.1\|1692813_1693335_-	DUF4142 domain-containing protein	NA	NA	NA	NA
WP_035350979.1\|1693627_1695904_-	TonB-dependent receptor	NA	NA	NA	NA
WP_035351000.1\|1696103_1696916_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_063354187.1\|1697247_1698588_-	sorbosone dehydrogenase family protein	NA	NA	NA	NA
WP_063354188.1\|1698931_1699126_-	hypothetical protein	NA	NA	NA	NA
WP_063354189.1\|1699139_1700279_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_063354190.1\|1700293_1701907_-	cytochrome d terminal oxidase subunit 1	NA	NA	NA	NA
WP_063354191.1\|1701971_1703663_-	thiol reductant ABC exporter subunit CydC	A0A285PWH2	Cedratvirus	1.1e-12	30.1
WP_063354192.1\|1703659_1705354_-	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.2e-25	32.8
WP_063354193.1\|1705885_1706575_-	Fe2+-dependent dioxygenase	A0A0E3FJG1	Synechococcus_phage	1.7e-12	32.5
WP_063354194.1\|1706678_1709117_-	TonB-dependent receptor	NA	NA	NA	NA
WP_063354195.1\|1709266_1709962_-	sel1 repeat family protein	NA	NA	NA	NA
WP_006117246.1\|1710292_1711282_-	hypothetical protein	NA	NA	NA	NA
WP_063354196.1\|1711313_1712414_-	asparaginase	NA	NA	NA	NA
WP_063354197.1\|1712530_1714120_-	bifunctional aspartate transaminase/aspartate 4-decarboxylase	NA	NA	NA	NA
WP_063354198.1\|1714145_1715837_-	aspartate-alanine antiporter	NA	NA	NA	NA
WP_157884508.1\|1716538_1716715_+	hypothetical protein	NA	NA	NA	NA
WP_063354199.1\|1717033_1717312_-	hypothetical protein	NA	NA	NA	NA
WP_157884509.1\|1717627_1718382_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	6.5e-26	47.9
WP_063354201.1\|1718634_1720257_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.9e-60	30.5
WP_063354203.1\|1720952_1723466_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.7e-17	40.6
WP_063354204.1\|1723566_1724637_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	3.0e-77	44.5
WP_157884487.1\|1724949_1725712_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.2e-11	31.6
WP_063354205.1\|1725792_1726257_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_063354206.1\|1727045_1728401_-	MFS transporter	NA	NA	NA	NA
WP_035352011.1\|1728685_1729078_-	hypothetical protein	NA	NA	NA	NA
WP_063354207.1\|1729792_1730866_+	alkene reductase	NA	NA	NA	NA
WP_063354208.1\|1730883_1731885_-	CRISPR-associated endonuclease Cas3''	NA	NA	NA	NA
WP_082823235.1\|1732190_1732460_-	hypothetical protein	NA	NA	NA	NA
WP_063354927.1\|1732498_1732855_-	hypothetical protein	NA	NA	NA	NA
WP_063354209.1\|1732896_1733991_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_063354210.1\|1734907_1735891_+	DUF1852 domain-containing protein	NA	NA	NA	NA
WP_063354211.1\|1735918_1736950_+	methionine synthase	NA	NA	NA	NA
WP_157884510.1\|1736969_1737458_-	hypothetical protein	NA	NA	NA	NA
WP_063354212.1\|1737654_1738314_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_063354213.1\|1738225_1739278_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
WP_063354214.1\|1739504_1740398_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_082823170.1\|1740837_1741176_+	MerR family DNA-binding protein	NA	NA	NA	NA
WP_063354215.1\|1741259_1742162_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_063354216.1\|1742254_1743460_-	MFS transporter	NA	NA	NA	NA
WP_157884511.1\|1744492_1745703_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	2.3e-94	62.3
WP_063354219.1\|1746195_1746597_-	DNA mismatch endonuclease Vsr	I6NSG0	Burkholderia_phage	7.1e-40	59.8
WP_082823171.1\|1746593_1747526_-	DUF4928 family protein	NA	NA	NA	NA
WP_063354220.1\|1747522_1748386_-	hypothetical protein	I6NTM1	Burkholderia_phage	5.4e-93	58.8
WP_063354221.1\|1748382_1749531_-	DNA cytosine methyltransferase	I6NLI4	Burkholderia_phage	1.6e-145	65.6
WP_157884512.1\|1749893_1752299_+	hypothetical protein	NA	NA	NA	NA
WP_082823236.1\|1752316_1753084_-	multidrug transporter	NA	NA	NA	NA
WP_063354131.1\|1753075_1753489_+\|transposase	transposase	B6ETC4	Enterobacteria_phage	2.2e-20	50.5
WP_010511145.1\|1753726_1754758_-\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011122

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP011121

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP011120

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection