CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011255	Bordetella pertussis strain I344 chromosome, complete genome	5 crisprs	csa3,cas3,DEDDh,DinG	0	0	27	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011255_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011255_1

251601-251685

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011255_1

>merge|NZ_CP011255|1|251601-251685|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>NZ_CP011255|1|1|251601-251685|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011255.1\|WP_003814321.1\|261972_263727_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
NZ_CP011255.1\|WP_003814356.1\|241345_242389_-\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
NZ_CP011255.1\|WP_010929701.1\|247047_247539_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
NZ_CP011255.1\|WP_010929706.1\|256706_257243_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
NZ_CP011255.1\|WP_003814355.1\|242559_244662_+\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|129868
NZ_CP011255.1\|WP_003814324.1\|259918_260902_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
NZ_CP011255.1\|WP_010929707.1\|257394_258786_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
NZ_CP011255.1\|WP_023997118.1\|252633_254523_-\|DNA-mismatch-repair-endonuclease-MutL	unknown	unknown	gnl\|CDD\|234630
NZ_CP011255.1\|WP_003814363.1\|239126_239537_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|131478
NZ_CP011255.1\|WP_010929708.1\|258802_259783_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
NZ_CP011255.1\|WP_010929704.1\|249586_250288_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
NZ_CP011255.1\|WP_010929702.1\|247535_248891_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997
NZ_CP011255.1\|WP_003814339.1\|250540_251590_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP011255.1\|WP_010929709.1\|260966_261866_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
NZ_CP011255.1\|WP_003814358.1\|240558_241302_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP011255.1\|WP_003814337.1\|251695_252637_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
NZ_CP011255.1\|WP_003814351.1\|246072_247029_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP011255.1\|WP_019247543.1\|255390_256776_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
NZ_CP011255.1\|WP_010929703.1\|248891_249590_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
NZ_CP011255.1\|WP_003814332.1\|254609_255248_+\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|182775

Protein	Function_ID	Function_description	E-value
NZ_CP011255.1\|WP_003814321.1\|261972_263727_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
NZ_CP011255.1\|WP_003814356.1\|241345_242389_-\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
NZ_CP011255.1\|WP_010929701.1\|247047_247539_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
NZ_CP011255.1\|WP_010929706.1\|256706_257243_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
NZ_CP011255.1\|WP_003814355.1\|242559_244662_+\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
NZ_CP011255.1\|WP_003814324.1\|259918_260902_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
NZ_CP011255.1\|WP_010929707.1\|257394_258786_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_CP011255.1\|WP_023997118.1\|252633_254523_-\|DNA-mismatch-repair-endonuclease-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
NZ_CP011255.1\|WP_003814363.1\|239126_239537_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47
NZ_CP011255.1\|WP_010929708.1\|258802_259783_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
NZ_CP011255.1\|WP_010929704.1\|249586_250288_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
NZ_CP011255.1\|WP_010929702.1\|247535_248891_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
NZ_CP011255.1\|WP_003814339.1\|250540_251590_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP011255.1\|WP_010929709.1\|260966_261866_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
NZ_CP011255.1\|WP_003814358.1\|240558_241302_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
NZ_CP011255.1\|WP_003814337.1\|251695_252637_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
NZ_CP011255.1\|WP_003814351.1\|246072_247029_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
NZ_CP011255.1\|WP_019247543.1\|255390_256776_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	1.25625e-84
NZ_CP011255.1\|WP_010929703.1\|248891_249590_-\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
NZ_CP011255.1\|WP_003814332.1\|254609_255248_+\|VTT-domain-containing-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.10927e-69

>NZ_CP011255.1|WP_003814339.1|250540_251590_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>NZ_CP011255.1|WP_010929704.1|249586_250288_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>NZ_CP011255.1|WP_010929703.1|248891_249590_-|HAD-IB-family-hydrolase
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>NZ_CP011255.1|WP_010929702.1|247535_248891_-|polynucleotide-adenylyltransferase-PcnB
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>NZ_CP011255.1|WP_010929701.1|247047_247539_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>NZ_CP011255.1|WP_003814351.1|246072_247029_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>NZ_CP011255.1|WP_003814355.1|242559_244662_+|TRAP-transporter-large-permease-subunit
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>NZ_CP011255.1|WP_003814356.1|241345_242389_-|TRAP-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>NZ_CP011255.1|WP_003814358.1|240558_241302_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>NZ_CP011255.1|WP_003814363.1|239126_239537_+|carboxymuconolactone-decarboxylase-family-protein
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA
>NZ_CP011255.1|WP_003814337.1|251695_252637_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>NZ_CP011255.1|WP_023997118.1|252633_254523_-|DNA-mismatch-repair-endonuclease-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAVPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>NZ_CP011255.1|WP_003814332.1|254609_255248_+|VTT-domain-containing-protein
MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>NZ_CP011255.1|WP_019247543.1|255390_256776_-|N-acetylmuramoyl-L-alanine-amidase
MVERDCPPAHGALSPRAAARRRLISVAATLLVLPVVPRLAHAATILAVRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>NZ_CP011255.1|WP_010929706.1|256706_257243_-|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>NZ_CP011255.1|WP_010929707.1|257394_258786_+|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>NZ_CP011255.1|WP_010929708.1|258802_259783_-|AEC-family-transporter
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>NZ_CP011255.1|WP_003814324.1|259918_260902_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>NZ_CP011255.1|WP_010929709.1|260966_261866_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>NZ_CP011255.1|WP_003814321.1|261972_263727_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: NZ_CP011255_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011255_2

435129-435222

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP011255_2

>merge|NZ_CP011255|2|435129-435222|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>NZ_CP011255|2|2|435129-435222|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011255.1\|WP_003820700.1\|435867_436212_-\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
NZ_CP011255.1\|WP_003814681.1\|444139_445117_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
NZ_CP011255.1\|WP_022997984.1\|424243_425221_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP011255.1\|WP_003814728.1\|429649_429829_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
NZ_CP011255.1\|WP_019247421.1\|434499_434898_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|234569
NZ_CP011255.1\|WP_010929786.1\|426618_428130_+\|TAXI-family-TRAP-transporter-solute-binding-subunit	unknown	unknown	gnl\|CDD\|270238
NZ_CP011255.1\|WP_010929788.1\|436311_437712_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP011255.1\|WP_003814685.1\|443157_444129_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
NZ_CP011255.1\|WP_033446199.1\|423656_424151_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP011255.1\|WP_003814730.1\|430238_430973_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
NZ_CP011255.1\|WP_010929791.1\|442305_443091_+\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|181723
NZ_CP011255.1\|WP_003814694.1\|440129_440885_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP011255.1\|WP_003814701.1\|435308_435779_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP011255.1\|WP_010929577.1\|433417_434368_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP011255.1\|WP_003814726.1\|428145_429459_-\|short-chain-fatty-acid-transporter	unknown	unknown	gnl\|CDD\|224942
NZ_CP011255.1\|WP_003814691.1\|441080_442313_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NZ_CP011255.1\|WP_010929789.1\|439500_440019_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP011255.1\|WP_010929785.1\|425416_426622_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
NZ_CP011255.1\|WP_019247419.1\|445242_446415_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173841
NZ_CP011255.1\|WP_003814720.1\|422468_423527_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030

Protein	Function_ID	Function_description	E-value
NZ_CP011255.1\|WP_003820700.1\|435867_436212_-\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
NZ_CP011255.1\|WP_003814681.1\|444139_445117_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
NZ_CP011255.1\|WP_022997984.1\|424243_425221_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
NZ_CP011255.1\|WP_003814728.1\|429649_429829_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
NZ_CP011255.1\|WP_019247421.1\|434499_434898_-\|GTP-binding-protein	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
NZ_CP011255.1\|WP_010929786.1\|426618_428130_+\|TAXI-family-TRAP-transporter-solute-binding-subunit	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
NZ_CP011255.1\|WP_010929788.1\|436311_437712_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
NZ_CP011255.1\|WP_003814685.1\|443157_444129_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
NZ_CP011255.1\|WP_033446199.1\|423656_424151_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
NZ_CP011255.1\|WP_003814730.1\|430238_430973_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
NZ_CP011255.1\|WP_010929791.1\|442305_443091_+\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
NZ_CP011255.1\|WP_003814694.1\|440129_440885_+\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
NZ_CP011255.1\|WP_003814701.1\|435308_435779_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
NZ_CP011255.1\|WP_010929577.1\|433417_434368_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
NZ_CP011255.1\|WP_003814726.1\|428145_429459_-\|short-chain-fatty-acid-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
NZ_CP011255.1\|WP_003814691.1\|441080_442313_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
NZ_CP011255.1\|WP_010929789.1\|439500_440019_-\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
NZ_CP011255.1\|WP_010929785.1\|425416_426622_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
NZ_CP011255.1\|WP_019247419.1\|445242_446415_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
NZ_CP011255.1\|WP_003814720.1\|422468_423527_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89

>NZ_CP011255.1|WP_019247421.1|434499_434898_-|GTP-binding-protein
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>NZ_CP011255.1|WP_010929577.1|433417_434368_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>NZ_CP011255.1|WP_003814730.1|430238_430973_-|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>NZ_CP011255.1|WP_003814728.1|429649_429829_-|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>NZ_CP011255.1|WP_003814726.1|428145_429459_-|short-chain-fatty-acid-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>NZ_CP011255.1|WP_010929786.1|426618_428130_+|TAXI-family-TRAP-transporter-solute-binding-subunit
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>NZ_CP011255.1|WP_010929785.1|425416_426622_+|sodium/glutamate-symporter
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>NZ_CP011255.1|WP_022997984.1|424243_425221_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>NZ_CP011255.1|WP_033446199.1|423656_424151_+|GNAT-family-N-acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>NZ_CP011255.1|WP_003814720.1|422468_423527_-|glycosyltransferase-family-2-protein
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ
>NZ_CP011255.1|WP_003814701.1|435308_435779_-|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>NZ_CP011255.1|WP_003820700.1|435867_436212_-|TIGR01244-family-phosphatase
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>NZ_CP011255.1|WP_010929788.1|436311_437712_-|PLP-dependent-aminotransferase-family-protein
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>NZ_CP011255.1|WP_010929789.1|439500_440019_-|MgtC/SapB-family-protein
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>NZ_CP011255.1|WP_003814694.1|440129_440885_+|TerC-family-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>NZ_CP011255.1|WP_003814691.1|441080_442313_+|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>NZ_CP011255.1|WP_010929791.1|442305_443091_+|crotonase/enoyl-CoA-hydratase-family-protein
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>NZ_CP011255.1|WP_003814685.1|443157_444129_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>NZ_CP011255.1|WP_003814681.1|444139_445117_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>NZ_CP011255.1|WP_019247419.1|445242_446415_+|acyl-CoA-dehydrogenase-family-protein
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR

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Crispr_ID: NZ_CP011255_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011255_3

1553898-1554025

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011255_3

>merge|NZ_CP011255|3|1553898-1554025|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>NZ_CP011255|3|3|1553898-1554025|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011255.1\|WP_010930564.1\|1545682_1546459_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP011255.1\|WP_003812460.1\|1560882_1561293_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
NZ_CP011255.1\|WP_010930566.1\|1554048_1554699_-\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
NZ_CP011255.1\|WP_003812491.1\|1544075_1544507_+\|OB-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|224462
NZ_CP011255.1\|WP_010930569.1\|1558396_1558888_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
NZ_CP011255.1\|WP_005012067.1\|1551540_1552491_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP011255.1\|WP_010930561.1\|1542860_1543262_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
NZ_CP011255.1\|WP_010930565.1\|1548671_1549340_+\|3-oxoacid-CoA-transferase-subunit-A	unknown	unknown	gnl\|CDD\|131482
NZ_CP011255.1\|WP_019247934.1\|1550757_1550970_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP011255.1\|WP_010930570.1\|1559633_1560845_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
NZ_CP011255.1\|WP_019247244.1\|1554827_1556030_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_CP011255.1\|WP_019247935.1\|1550008_1550740_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP011255.1\|WP_003812478.1\|1549332_1549974_+\|CoA-transferase-subunit-B	unknown	unknown	gnl\|CDD\|188219
NZ_CP011255.1\|WP_010930563.1\|1544503_1545661_+\|thiolase	unknown	unknown	gnl\|CDD\|180434
NZ_CP011255.1\|WP_003812463.1\|1559103_1559616_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
NZ_CP011255.1\|WP_003812458.1\|1561294_1561618_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
NZ_CP011255.1\|WP_010930568.1\|1556107_1558144_+\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP011255.1\|WP_003812456.1\|1561620_1562133_+\|Fe-S-protein-assembly-co-chaperone-HscB	unknown	unknown	gnl\|CDD\|235133
NZ_CP011255.1\|WP_015063637.1\|1543275_1544079_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223955
NZ_CP011255.1\|WP_010930571.1\|1562262_1564125_+\|Fe-S-protein-assembly-chaperone-HscA	unknown	unknown	gnl\|CDD\|235360

Protein	Function_ID	Function_description	E-value
NZ_CP011255.1\|WP_010930564.1\|1545682_1546459_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	4.84544e-78
NZ_CP011255.1\|WP_003812460.1\|1560882_1561293_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99
NZ_CP011255.1\|WP_010930566.1\|1554048_1554699_-\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.25833e-105
NZ_CP011255.1\|WP_003812491.1\|1544075_1544507_+\|OB-fold-domain-containing-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	1.42164e-21
NZ_CP011255.1\|WP_010930569.1\|1558396_1558888_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
NZ_CP011255.1\|WP_005012067.1\|1551540_1552491_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
NZ_CP011255.1\|WP_010930561.1\|1542860_1543262_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	1.90882e-68
NZ_CP011255.1\|WP_010930565.1\|1548671_1549340_+\|3-oxoacid-CoA-transferase-subunit-A	gnl\|CDD\|131482	TIGR02429, 3-oxoadipate_CoA-transferase_subunit_A, 3-oxoacid CoA-transferase, A subunit. Various members of this family are characterized as the A subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The B subunit represents a different clade in pfam01144, described by TIGR02428. The two are found in general as tandem genes and occasionally as a fusion.	1.07744e-141
NZ_CP011255.1\|WP_019247934.1\|1550757_1550970_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	1.69368e-19
NZ_CP011255.1\|WP_010930570.1\|1559633_1560845_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NZ_CP011255.1\|WP_019247244.1\|1554827_1556030_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_CP011255.1\|WP_019247935.1\|1550008_1550740_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	8.17828e-106
NZ_CP011255.1\|WP_003812478.1\|1549332_1549974_+\|CoA-transferase-subunit-B	gnl\|CDD\|188219	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit. Various members of this family are characterized as the B subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The A subunit represents a different clade in pfam01144.	3.32577e-117
NZ_CP011255.1\|WP_010930563.1\|1544503_1545661_+\|thiolase	gnl\|CDD\|180434	PRK06158, PRK06158, thiolase; Provisional.	0
NZ_CP011255.1\|WP_003812463.1\|1559103_1559616_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
NZ_CP011255.1\|WP_003812458.1\|1561294_1561618_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
NZ_CP011255.1\|WP_010930568.1\|1556107_1558144_+\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP011255.1\|WP_003812456.1\|1561620_1562133_+\|Fe-S-protein-assembly-co-chaperone-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
NZ_CP011255.1\|WP_015063637.1\|1543275_1544079_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	1.56988e-63
NZ_CP011255.1\|WP_010930571.1\|1562262_1564125_+\|Fe-S-protein-assembly-chaperone-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0

>NZ_CP011255.1|WP_005012067.1|1551540_1552491_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>NZ_CP011255.1|WP_019247934.1|1550757_1550970_+|hypothetical-protein
MGPAGIPADITAAWAKEIARVAALPDVSEKLATLGVESVSSTPQQFSAFVESEIRKWEKVVQDAHIPPVQ
>NZ_CP011255.1|WP_019247935.1|1550008_1550740_+|hypothetical-protein
MKTKIKIVTLALCAFSSAVFASSFPSKPINLIVPYPPGGAVDPIALLYAEKISQSWGVPVIVLNRPGAGTTIGLNQAARAEPDGYTVVLGTASITSNAPLYRSLPYDTLKDFTYLSMAGMIPLAITANPRTAVNSMDELVGQLKKKPGSLTYSSSGNGTIIHLGGELFKSLAGVDMVHVPYKGSGPSVMAGVAGEVDLTFDSVFLMDPQVKAGKLKYIAVASEKRLKSLPEVPAIGESILVIS
>NZ_CP011255.1|WP_003812478.1|1549332_1549974_+|CoA-transferase-subunit-B
MSKGWSNDEIAARIAVDLPEHAIVNLGIGLPILVANHIPEGKTIFFHSENGIIGLGPVPAPGQEDPDIVNAAKKHATLIAGASIVHHADSFSLIRGGRLDYSVLGGLQVSSGGDIANWKVPGQKGGGGVGGAMDLAVGARNVLVMMRHQDKTGASKLVKSCTFPLTAVSAVTRVYTELGIFECAGDAFIVRESAPGIGKDELLRKTEAALTFP
>NZ_CP011255.1|WP_010930565.1|1548671_1549340_+|3-oxoacid-CoA-transferase-subunit-A
MLNKTCESADEAVSVVESGATILISGFGDIGLPFELLHALARTSVKDLTIVSNNAGTGELGLSRLFRNRQVSRLIASFPSQPDSHHYFAAYQEGLVDLELVPQGTLAERIRAAGAGLAGFFTPTGYGTELAQGKECRMFKGKGYVFEEALPGDFAFIKAHVADAYGNFRYRRASRTFNPIMAMAARTTIAEAKQMVPVGSIDPDDVHTPGVFVDRIVEVRDE
>NZ_CP011255.1|WP_010930564.1|1545682_1546459_+|SDR-family-oxidoreductase
MQDKLLTLENRQVIVTGAGQGIGRALASAIAGLGGRVVAVDLNADALAALREALGHERCVTVAGNVADPSLAQQAVDAGVTAFGGVNGLVNNAGVTRTAMIDKMSISDWQQVIDVHLSGSFYFLQALGRHLLGRAKAGGDGAGAIVNISSDAGRRGTIGQINYGAAKAGVLGLTMCAAREWARYGIRTNTVGFGVVETPMTETIRGEKFRDTYLSQIPLGRWGEADEVVRPVCFLLSDADSYVTGQHLSVNGGYTIGL
>NZ_CP011255.1|WP_010930563.1|1544503_1545661_+|thiolase
MIQERFPRGKTAIVACATYGIGESPGLSSLDLAVRASVQALDSVGLTPADVDGLFIGLPDDFVSGLSFTEYLGISPRLTDNNRTGGSSFLTHAIHAALALEAGLCDVALIAYGSNQRSGAGKLVSSMRPSPYEGAYKLARPVGAYALAASRYAAQYGLQKEQLGAVALAARQWAQKNPEAYMRAPLTMDECLASRLVCDPFSVRDCCLVTDGAAAVVMVRADRARDLAARPAYLLGGAAAAWHKDITNMPDLTVTAASLSGPRAMAQAGVTPADIDVLELYDAFTLNTILFLEDLGFCAKGEGGAFVEDGRIAPGGALPVNTNGGGLSCVHPGMYGLFTMVEAAQQLAGAAGERQVAQARLALAHGNGGELSSQATLILGTEETI
>NZ_CP011255.1|WP_003812491.1|1544075_1544507_+|OB-fold-domain-containing-protein
MTEHPQAASALLPQQEYFAHLADGRFMIQRSRSSGEYVFYPRVAAPRTGAQDLEWVAASGRGTVYATTVMRVRPPAAPYNVCLVELEEGPRMMSRVEGIGPEDVQVGMAVRARIIRDDAGEPLVVFEPAGPSDAGIGQGRAAQ
>NZ_CP011255.1|WP_015063637.1|1543275_1544079_+|enoyl-CoA-hydratase/isomerase-family-protein
MIMSVLEISRVGACAVLTLNRPAARNALDMDLRNALAKALPEIRDDATVRAVVLTGAGGHFCAGGDIRAIAAGQGNADVFEGRNRILSMQRWFDGLVDLEKPVIAAVDGVAFGAGLSLALAADFVLASPRATFCAVFARLGYVPDLGGMYLLPRAVGLARAKALAFSARVVGAPEALEMGIAHQLVDDRPVLDAALELAGRFEQAPAGALGIVKSVMNHAFESDRRTVYMQEALAQALCRESAFHQEAARRFLDKQAPLYQWPQEQQ
>NZ_CP011255.1|WP_010930561.1|1542860_1543262_+|MaoC-family-dehydratase
MGQPIVVDQSAIDTFGDVVHDRQWIHVDPVRAAAESPFGTTIAHGLLTLSLITGWYHQLFEFPGRKLALNYGFDKVRFPAPVPSGSALVGSFRLARVDELGPDEARCLWEVDVRVAGAERPAMVAEWLMQLRY
>NZ_CP011255.1|WP_010930566.1|1554048_1554699_-|transcriptional-repressor-LexA
MATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>NZ_CP011255.1|WP_019247244.1|1554827_1556030_-|aspartate/tyrosine/aromatic-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>NZ_CP011255.1|WP_010930568.1|1556107_1558144_+|excinuclease-ABC-subunit-UvrB
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>NZ_CP011255.1|WP_010930569.1|1558396_1558888_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>NZ_CP011255.1|WP_003812463.1|1559103_1559616_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>NZ_CP011255.1|WP_010930570.1|1559633_1560845_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>NZ_CP011255.1|WP_003812460.1|1560882_1561293_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>NZ_CP011255.1|WP_003812458.1|1561294_1561618_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>NZ_CP011255.1|WP_003812456.1|1561620_1562133_+|Fe-S-protein-assembly-co-chaperone-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>NZ_CP011255.1|WP_010930571.1|1562262_1564125_+|Fe-S-protein-assembly-chaperone-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: NZ_CP011255_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011255_4

2649516-2649632

Orphan

Consensus_repeat	Method
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011255_4

>merge|NZ_CP011255|4|2649516-2649632|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAAGGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGTTTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

>NZ_CP011255|4|4|2649516-2649632|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	GGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGT
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011255.1\|WP_010930192.1\|2656094_2657072_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226706
NZ_CP011255.1\|WP_019248398.1\|2640417_2641386_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP011255.1\|WP_010930198.1\|2637883_2638834_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP011255.1\|WP_010930191.1\|2657053_2658754_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
NZ_CP011255.1\|WP_010930194.1\|2649743_2652974_-\|autotransporter-SphB3	unknown	unknown	gnl\|CDD\|377133
NZ_CP011255.1\|WP_003816844.1\|2639502_2640348_-\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
NZ_CP011255.1\|WP_010930200.1\|2634702_2636985_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
NZ_CP011255.1\|WP_010926448.1\|2658856_2659961_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP011255.1\|WP_010930202.1\|2631237_2631726_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP011255.1\|WP_019248935.1\|2637161_2637785_+\|serotype-2-fimbrial-subunit	unknown	unknown	gnl\|CDD\|339870
NZ_CP011255.1\|WP_023995083.1\|2641385_2642249_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225212
NZ_CP011255.1\|WP_010930190.1\|2660752_2662273_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_CP011255.1\|WP_010926447.1\|2659990_2660746_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180796
NZ_CP011255.1\|WP_003812405.1\|2638880_2639435_-\|transcription-elongation-factor-GreB	unknown	unknown	gnl\|CDD\|179345
NZ_CP011255.1\|WP_003812422.1\|2654116_2654812_-\|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD	unknown	unknown	gnl\|CDD\|213222
NZ_CP011255.1\|WP_010928340.1\|2653255_2654083_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|238635
NZ_CP011255.1\|WP_010930196.1\|2645081_2649008_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|378762
NZ_CP011255.1\|WP_003812436.1\|2662600_2663233_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_CP011255.1\|WP_019247537.1\|2654804_2656085_-\|lipoprotein-releasing-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274034
NZ_CP011255.1\|WP_010930201.1\|2631851_2634548_+\|alpha-ketoglutarate-dehydrogenase	unknown	unknown	gnl\|CDD\|237267

Protein	Function_ID	Function_description	E-value
NZ_CP011255.1\|WP_010930192.1\|2656094_2657072_+\|hypothetical-protein	gnl\|CDD\|226706	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown].	1.08896e-20
NZ_CP011255.1\|WP_019248398.1\|2640417_2641386_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.0858e-13
NZ_CP011255.1\|WP_010930198.1\|2637883_2638834_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.71464e-23
NZ_CP011255.1\|WP_010930191.1\|2657053_2658754_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
NZ_CP011255.1\|WP_010930194.1\|2649743_2652974_-\|autotransporter-SphB3	gnl\|CDD\|377133	pfam03797, Autotransporter, Autotransporter beta-domain. Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.	3.21051e-45
NZ_CP011255.1\|WP_003816844.1\|2639502_2640348_-\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	1.79612e-72
NZ_CP011255.1\|WP_010930200.1\|2634702_2636985_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_CP011255.1\|WP_010926448.1\|2658856_2659961_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP011255.1\|WP_010930202.1\|2631237_2631726_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.95114e-53
NZ_CP011255.1\|WP_019248935.1\|2637161_2637785_+\|serotype-2-fimbrial-subunit	gnl\|CDD\|339870	pfam16970, FimA, Type-1 fimbrial protein, A. FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.	7.5249e-22
NZ_CP011255.1\|WP_023995083.1\|2641385_2642249_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.92718e-60
NZ_CP011255.1\|WP_010930190.1\|2660752_2662273_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP011255.1\|WP_010926447.1\|2659990_2660746_+\|SDR-family-oxidoreductase	gnl\|CDD\|180796	PRK07023, PRK07023, SDR family oxidoreductase.	5.47641e-103
NZ_CP011255.1\|WP_003812405.1\|2638880_2639435_-\|transcription-elongation-factor-GreB	gnl\|CDD\|179345	PRK01885, greB, transcription elongation factor GreB; Reviewed.	4.04513e-99
NZ_CP011255.1\|WP_003812422.1\|2654116_2654812_-\|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.7791e-114
NZ_CP011255.1\|WP_010928340.1\|2653255_2654083_-\|TatD-family-hydrolase	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.42767e-89
NZ_CP011255.1\|WP_010930196.1\|2645081_2649008_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	gnl\|CDD\|378762	pfam11924, IAT_beta, Inverse autotransporter, beta-domain. This is a family of beta-barrel porin-like outer membrane proteins from enteropathogenic Gram-negative bacteria. Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They carry C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal beta domains that are embedded in the outer membrane. This family represents the beta-barrel porin-like domain in the outer membrane that can be found in intimins, invasins and some inverse autotransporters.	8.97198e-85
NZ_CP011255.1\|WP_003812436.1\|2662600_2663233_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	1.55004e-17
NZ_CP011255.1\|WP_019247537.1\|2654804_2656085_-\|lipoprotein-releasing-ABC-transporter-permease-subunit	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	6.22467e-159
NZ_CP011255.1\|WP_010930201.1\|2631851_2634548_+\|alpha-ketoglutarate-dehydrogenase	gnl\|CDD\|237267	PRK13012, PRK13012, 2-oxoacid dehydrogenase subunit E1; Provisional.	0

>NZ_CP011255.1|WP_010930196.1|2645081_2649008_-|inverse-autotransporter-beta-barrel-domain-containing-protein
MNKNIYRVVWSLVRGAWVVAGEWARAGRKSSSPRRQNRQRARRGVAAMVGGSILAQALLPLSALAQGAPTLRPARVAQEEAGQDAAWTRKLAAQAESLARRQAERQPGARVDGDYLKREAQAQVNDVLRDGVNLARESGLPFLRNLQGGLSHDFESGRTSLQLNTIDEVYRAGRNTGLLQLGAHNQNDRPTANAGAVYRREVNDALMVGANGFLDYEFGKQHLRGSVGLEVIAPEFSLYGNVYAPLSDWKGAKRNNRREEKPASGMDVGVGYRPAFAPGLSLSATHFRWNGAEVDYFDNGRTQAGAKGFKVGVEYRPVSLVSVGLEQTKVIGGGRETRMQLGLNINLSEPLSKQLRRDASGTPAFSPDARRHALVERENRIVLNTRRKEIILPLVVSKVSTLQADGRVTVIGATQPFATVTVRMPDGMTGTATADASGRFAYTSAGDQPSGVLALRARNAEGDSSREVTYRYVDEVVLGDLQVAVMALVPLPADRALEVRGKTEPKVDVKVSFSNGESVLAKADAKGLFTVRSTRKVTQGKVLVQATHPQTRKEARAVADYLPPATLAPTIDAVTAQADTGRVTVTGQAEPGAQVDVHFPDGTAKTVDAGADGAYAATSDGDMVSGDIHAQATDKAGNQSPEATRHYGDTTDITPPAAPTIANVATDATSGRVTAAGMAEPGANVTVNFPDGTRKTVVAGGDGAYTATSDRDMVSGDIRVQATDKAGNQSPEATRAYADAVDRTAPEVPTVTHVATDAKSGRITVTGMAEPGANVTVNFPDGTRKTAVAGGDGAYTATSDGDMVSGDIRVQATDKAGNRSPEATRAYADTVDTTPPAVPTITDVTTDATNGRITVTGVAEPGANVTVDFPDGTRKTVVAGGDGAYTATSDRDMASGDVRVQAIDKGGNRSPEATRAYADTVDKTAPAAPTITNVTTDAASGRITVTGMAEPGANVAVNFPDGTRKTVVADGAGAYAADSDGDMVAGDIHVQATDKAGNRSPEGTRAYVDTVDKTPSAAPTIVRVTTDRSSGVVTVAGTADPDNDVTVQFPDGGRKTVKAGKDGSYSVTSDNDIFSGIIQVSARNPAGNASPEVRQDYRDEFVPANAITNIETNSRNGIVTVSGKTSPDATVVVSFPGGDEARTRAKGDGTFSVSSPMDIPRGVVSLSTEVNGVQTVVATRTYEDKFTKGGLDFTAFLPYTPKFNGVSTSDTSAVLLSIPRYFYSGGAPVAKIMPPEADGSEFAKRAAAAMRAQVTPGRDSSEYDVRVSWPAGTFTPADVGQRADLAVKVFDKGTGKYMLLLAPVNFPY
>NZ_CP011255.1|WP_023995083.1|2641385_2642249_-|MBL-fold-metallo-hydrolase
MTVHSYWTLTALDVGQGGAVVLETARHVLLFDTGPRHGDASDAGERVIAPFLWARGYRHIDTLVVSHADLDHTGGLRSVLAALPVGQAYASFDLAAWLARQARVRPDGWRAAPRMPPATRGCEAGVQWRVDGVRLRFVYPPSLAAPLPWRSSNARSCVLLVEGVGHRALLTGDVGLVQEAAFAAALPPVDLVMAPHHGSAMSSGSLLTAATRPAHAIAQAGYLNRFGHPAASAINRWRRAGAAVWRTDLDGAVRADSTPRGLFASGQRQVARRYWRDSRAGPDAPLR
>NZ_CP011255.1|WP_019248398.1|2640417_2641386_-|alpha/beta-hydrolase
MGHRRPSGPRRGDIMQEPRLDFVTCASPTGFHRMAYWEWGDPLNDRVLVCVHGLTRTGRDFDHLARRLAGQWRVVCPDVAGRGKSDWLSNPALYAVPQYVSDMATLIARVWPATLAWVGTSMGGLIGLGLAGAATMMRLARAMRPRPDGLPAQADDLRLHRLVLNDVGPRLNVEVLQRIAGNVAAQDSYSTFEAAVAAMRQISTTFGPHTDAQWDELARHIYVRQGGGWVRHFDPALAVPLGAQVAQAFEAGERILWQAYDSLDCPVLIVRGQDSDLLSAATAGEMLARNPRARLHEVPGVGHAPTLMTPEQIEPIARFLQE
>NZ_CP011255.1|WP_003816844.1|2639502_2640348_-|PHP-domain-containing-protein
MNIAAPNVDLHCHSTVSDGSMPPAAVARRAHANGVDVWALTDHDEIGGVAEAAQAAAALGMRFVAGVEISVTWAGLTVHIVGLRVDPANEALVQGLRDTRAGRAARAVQIGERLAGLGMPGAYEGALPFAGNPELISRTHFARFLVEAGYCPDVQTVFNKYLGDDCPGHVPMQWASLAEAVGWIRGAGGCAVIAHPGRYKYSPMQFDALYDEFLQLGGTGIEVVTGSHTSEEARRYAEVARRHGFLASRGSDFHSPTESRVDLGRLPPLPPDLKPVWHDWF
>NZ_CP011255.1|WP_003812405.1|2638880_2639435_-|transcription-elongation-factor-GreB
MNKAFVKESDRDDEDDLPEAQALPAGTRNYMTPQGYARLRDELSHLMNVERPSVVQVVSWAASNGDRSENGDYLYGKKRLREIDRRMRFLTKRLDIAEVVDPAAQPNRDQVFFGATVLYMDRAGEERTVTIVGVDEAEPLAGKISWISPVARALTKAHEGDTVTLRTPGGVEELEILEVRYPDA
>NZ_CP011255.1|WP_010930198.1|2637883_2638834_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLAGLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>NZ_CP011255.1|WP_019248935.1|2637161_2637785_+|serotype-2-fimbrial-subunit
MQIPFQRALRLCLRAALAAIASAAHADDGTIVITGTITDTTCVIEDPSGPNHTKVVQLPKISKNALKANGDQAGRTPFIIKLKDCPSSLGNGVKAYFEPGPTTDYSTGDLRAYKMVYATNPQTQLSNITAATEAQGVQVRISNLNDSKITMGANEATQQAAGFDPEVQTGGTSRTVTMRYLASYVKKNGDVEASAITTYVGFSVVYP
>NZ_CP011255.1|WP_010930200.1|2634702_2636985_+|NADP-dependent-malic-enzyme
MDENLTKLALDYHAYPTPGKISVTPTKTLANQDDLSLAYSPGVAAACMAIFDQGNDAASKYTSRSNLVGVITNGTAVLGLGNIGSLAAKPVMEGKGCLFKKFAGIDVFDIELAENDPDKLVDIIAALEPTLGGVNLEDIKAPECFYIEKKLRERMNIPVFHDDQHGTAIISSAAILNGLKVVGKDIGQVKLACSGAGAAAIACLDLLVHLGIKREHIYVVDSRGVIWEGRDENMEPNKRRYAQKTEARTLADVVNGADVFLGCSTAGVLTPEMVKTMAAQPLILALANPEPEIRPELAKAARPDCIVATGRSDYPNQVNNVLCFPFIFRGALDAGATRITEEMKLACVKAIAELAQAEQNDEVARAYAGQELSFGPDYIIPKPFDPRLIVQIAPAVAQAAADSGVATRPIEDIEAYRQKLMGFVYHSGQLMRPLFQQAKQAPKRVVYADGEDERVLRAVQTVIDEKLAEPILVGRPSVIEMRIKKFGLRMVPGQNVEIVDPEDDSRFNDTWNGYYQLRGREGVTPAIAKAMIRKHNTLIGAMLLRRGDADALLCGVASKYDNQLKYVEEVIGRKPGQTYGALNVLMLPNQTLFVTDTHVNENPSADEIANITIQAAEEMLRFGVMPKIALLSHSNFGSRPTDSSRKMAHARKLVAERAPHLEVDGEMHADAALSESIRLQAYPDSTLKGRANLLVMPNLDTGNITYNMLKMTGSNGIAMGPILLGSARPVHILTTSATVRRIVNMTALAVVDAQQEAAEG
>NZ_CP011255.1|WP_010930201.1|2631851_2634548_+|alpha-ketoglutarate-dehydrogenase
MCNAQAGATPPQIPDPDPVETAEWCEALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQEPPFPGNLSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHFFRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLNDVDLAHFRQEITAGAQGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESIAALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWDALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRLRRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLAFRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVADWARFALQAAGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYSAQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYYSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYDPAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRAADATPQVRLLGAGPMLDEAMRAAQLLRDEHGLDAEVWSVTSFSELARGGRGAERAQALGLPCPDGNWLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDGFGHSDTRARLRDFFEVGAPWIVLHALDLLAREDSAWQPALQARREQLQAATRNVPSWQS
>NZ_CP011255.1|WP_010930202.1|2631237_2631726_-|Lrp/AsnC-family-transcriptional-regulator
MPPHALDAIDRRILDLLQTDASLTNVELARRVHLSPSPCLARVKALEAAGIIRGYVALADPAQLGLNLNVFIQVSLEKQVESELERFQGAMADCPEVMECYLMTGDADYLLRVVVADMPGLERFIVNRLSRIPGVKNIRSGFALKQVKYQTALPLRQGSGPQ
>NZ_CP011255.1|WP_010930194.1|2649743_2652974_-|autotransporter-SphB3
MAQASARGMGLRITSLAAALLGVYGAAGAAENRLECIGACPPGQPVAGAHYSGTNLSANREWVVYGEGSNAVFTLQGGSVTASGGLMGAVNAADGARVYLNQVSVRTDAGNGWEAPGVRAEYGALVNVRGGSIATVGGGSYGVQSLDSGTMIELNGTDIRTTDAYSDGLRAEFGGSIRAVGLTINTTGEHAVGAMGADDGTIALRDSRITTSGVDAYGLGTESQVLSPGGVLQVSNTAIQTSGKNAHGVYLQGGSSLNMSGGSIRTTGSGAAGLRVSNGSSVALNGVEVVASGPSLLSTLSATRQQSIVVGAGSNLTRNDGRLLLVRRVAGGELGQVTLTLKSGSYAAGNIENLAADGSRESSALTIVDVQSGAQWAGLVIDDTTAIVNGSQSGQHSGFSTAGDMVLEGGSAPVTFTGVSNIGGSSSLGAGSQTTFGGATTIGQSLAVLPGGSVAFNGPLTIGESVTEGQGTALSFNAPAIIGANVQGAGGAAFTFSGPAQVGGSVQGLDGASFRFSTSAPTAIAGGLSLAGGSSLGGGSPTTPIVVIGGADAVSGAILGGNLDIGGALRMTGASLAPGNSIGTVTVGSVGALSGSTYLAEVNAKGQSDLLVVRSGNVDLAGVSLVVGQENGTGGYVLNHDYTIIKTEAGKIVGEFAAASLDESLASTLVKLDPVKYGAQATQVSLSPDADKLAAARAGLIRNQSAVLDGALSVAGRNASADAVMLMSDTGQRADALDQLSGEVHGSAVSALYSNTQLLNRTVARRMSANLGAGLLAGAPTAQAAGPAAASAMPGTAAYPLWADVVDNWSSFDAKDNAAKAKSNTAGLFIGGDAAVGAGWRVGGALGFTDGRIKADAVDSRSDVTSYTAALYGGNSWAAGKGKLNFLAGVGYTHHDIDSRRSVDVGGAQTLKADYKANTTQLFAELGYQVPVGASSSVEPYAGLAWFNNHSDSFDEDGGPAALHGSGQTDQITTFTLGLRGNTALQLGATETRLSAGLGWRHANGDVDATRKLAFIQGGGTAFTVAGSPVAREAAVLDLAAEVDVGRNAALGLAYGGQFGNGNKENTGSLYLKVRF
>NZ_CP011255.1|WP_010928340.1|2653255_2654083_-|TatD-family-hydrolase
MLIDTHCHLDAAEFDADRMAVARAAREAGVQAIVIPAVERANFATVRQLAHAVDSGAYALGIHPLYVARARDEDLDSLRRAIESALPDPRFVAIGEIGLDFFVAEIASGAPRERQERFYAAQLDLAAEYGLPVLLHVRRSQDILLKHLRRRPGVPGGIAHAFNGSAQQAGAFVEQGFALGLGGAMTYPRALQIRRHAADIGLDHLVLETDAPDIPPAWLYEPERRNTPGQLPRIAAELAALRGQAVADVARATTTTALRVLPRLGALLQDRAATP
>NZ_CP011255.1|WP_003812422.1|2654116_2654812_-|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD
MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAGLSEKRKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVALARALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLHMENGRLQPD
>NZ_CP011255.1|WP_019247537.1|2654804_2656085_-|lipoprotein-releasing-ABC-transporter-permease-subunit
MLKIPYELWIGARYAGMARIRQRRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTAGVRLRVADMQRAPEVAAELTKVLPPYVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSDPQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRHD
>NZ_CP011255.1|WP_010930192.1|2656094_2657072_+|hypothetical-protein
MALTGTRTTIAAMLIVIPGALPAAAVAPELARLLPQHAPTLHGWLQAASARVQAFDAARQGCTPFEGWQLEQAGYQPQPGLPLGAGLGPLRAAGGTPGQPVWLADLAHLMLGADQAALLDPALLDLRADESAQLFEAAAPLFADSGFGATPIDAARWRLTLPAGMAPQTASPAAVAGQRLRAWWTQDVAMRPWRRLLNEIQMVWYEHPVNEARAARGAAPINALWLYGGATPWPAGAPAPARVCDELAATQRAGDWAAWLDALAMLDAAQLAPLAGPHGRPVQPLQLLLLGDDRRAALTLKPRAGLARWLPAPKHNWNAWWSRPV
>NZ_CP011255.1|WP_010930191.1|2657053_2658754_+|single-stranded-DNA-specific-exonuclease-RecJ
MVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVIHPEQTRMAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADVDFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITDHHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFALGPRINAAGRLADMSLGIACLTTDDEAQTLEMARELDNINRERRTIEAEMRDQALAAMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPDVHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
>NZ_CP011255.1|WP_010926448.1|2658856_2659961_+|peptide-chain-release-factor-2
MEAERQNQLVARLEDYAEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQGV
>NZ_CP011255.1|WP_010926447.1|2659990_2660746_+|SDR-family-oxidoreductase
MTDTVAILTGASRGLGAALARGLLAPGTRLITLARRADPDLEAAARTRGASLEQVQVDLSDPAAAGAAAKRLCAALPRDARRYLLINNAGTVSPVAQAAGLTDGAAIAGALNLNVTAVVLLTARFVAALQGLPADRRVLNISSGAGRNPNAGWGVYCAAKAALDMYSRVLKQEQGQDGVRVVALAPGIVDTDMQGAIRASDPADFPALERFREFHATGKLSAPADVAARILAYLDRDDFGTTEIDDIRNYQ
>NZ_CP011255.1|WP_010930190.1|2660752_2662273_+|lysine--tRNA-ligase
MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNNFVPDAHAADLHARYDGLDQEALTAAAVTVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFPHLRRED
>NZ_CP011255.1|WP_003812436.1|2662600_2663233_-|TetR-family-transcriptional-regulator
MHASSRGTEEAAGSPRRADVIATAGELFRLHGYERTTVRELARAVGLQSGSLFHHFRSKEEILVAVMSEGIEEVLEQGALALAHYQDPGARLAALFRVHMWSMLKGAGGDAMNALVYEWRSLSPAARGGVKALSDRYEDMWQDAVDDALRAGLVDGDARVIKRYLLGGLNLTVQWYRPQGRLAPGDFIEAMLRAALPGLPPGTGAWPLRD

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Crispr_ID: NZ_CP011255_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011255_5

3435056-3435165

Orphan

Consensus_repeat	Method
TTGACTGCCAAGACGGTATCTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011255_5

>merge|NZ_CP011255|5|3435056-3435165|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCCGCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGCTTGACGGCCAAGACGGTATCTGTCCCC

>NZ_CP011255|5|5|3435056-3435165|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCC	GCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGC
TTGACGGCCAAGACGGTATCTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011255.1\|WP_010931353.1\|3419333_3420422_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187652
NZ_CP011255.1\|WP_010931361.1\|3443097_3444438_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP011255.1\|WP_005013747.1\|3428454_3429405_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP011255.1\|WP_010931355.1\|3429911_3430682_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP011255.1\|WP_023994844.1\|3436381_3437353_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP011255.1\|WP_010927010.1\|3440604_3442029_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP011255.1\|WP_005013747.1\|3420418_3421369_-\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP011255.1\|WP_010931354.1\|3429401_3429869_-\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
NZ_CP011255.1\|WP_010931357.1\|3435696_3436377_+\|tellurite-resistance-TerB-family-protein	unknown	unknown	gnl\|CDD\|377342
NZ_CP011255.1\|WP_010931362.1\|3446428_3447307_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
NZ_CP011255.1\|WP_003818344.1\|3425627_3426506_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
NZ_CP011255.1\|WP_010927090.1\|3430702_3431503_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
NZ_CP011255.1\|WP_003814742.1\|3435166_3435559_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|224679
NZ_CP011255.1\|WP_003820957.1\|3444553_3446317_+\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	unknown	unknown	gnl\|CDD\|235424
NZ_CP011255.1\|WP_019247959.1\|3421722_3424701_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
NZ_CP011255.1\|WP_010931360.1\|3442045_3443101_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP011255.1\|WP_003814239.1\|3439903_3440605_+\|response-regulator	unknown	unknown	gnl\|CDD\|181883
NZ_CP011255.1\|WP_003814739.1\|3433017_3433803_+\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
NZ_CP011255.1\|WP_010931356.1\|3431513_3432923_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|182727
NZ_CP011255.1\|WP_077070462.1\|3437448_3438399_-\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
NZ_CP011255.1\|WP_010931353.1\|3419333_3420422_+\|NAD(P)H-binding-protein	gnl\|CDD\|187652	cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs. 5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.76863e-97
NZ_CP011255.1\|WP_010931361.1\|3443097_3444438_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
NZ_CP011255.1\|WP_005013747.1\|3428454_3429405_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
NZ_CP011255.1\|WP_010931355.1\|3429911_3430682_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
NZ_CP011255.1\|WP_023994844.1\|3436381_3437353_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	2.71001e-129
NZ_CP011255.1\|WP_010927010.1\|3440604_3442029_+\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
NZ_CP011255.1\|WP_005013747.1\|3420418_3421369_-\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
NZ_CP011255.1\|WP_010931354.1\|3429401_3429869_-\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
NZ_CP011255.1\|WP_010931357.1\|3435696_3436377_+\|tellurite-resistance-TerB-family-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
NZ_CP011255.1\|WP_010931362.1\|3446428_3447307_+\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
NZ_CP011255.1\|WP_003818344.1\|3425627_3426506_+\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
NZ_CP011255.1\|WP_010927090.1\|3430702_3431503_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
NZ_CP011255.1\|WP_003814742.1\|3435166_3435559_-\|OsmC-family-protein	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
NZ_CP011255.1\|WP_003820957.1\|3444553_3446317_+\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
NZ_CP011255.1\|WP_019247959.1\|3421722_3424701_+\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
NZ_CP011255.1\|WP_010931360.1\|3442045_3443101_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	1.57809e-49
NZ_CP011255.1\|WP_003814239.1\|3439903_3440605_+\|response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
NZ_CP011255.1\|WP_003814739.1\|3433017_3433803_+\|enoyl-ACP-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
NZ_CP011255.1\|WP_010931356.1\|3431513_3432923_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
NZ_CP011255.1\|WP_077070462.1\|3437448_3438399_-\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	4.11367e-22

>NZ_CP011255.1|WP_003814739.1|3433017_3433803_+|enoyl-ACP-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>NZ_CP011255.1|WP_010931356.1|3431513_3432923_+|transglycosylase-SLT-domain-containing-protein
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>NZ_CP011255.1|WP_010927090.1|3430702_3431503_+|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>NZ_CP011255.1|WP_010931355.1|3429911_3430682_-|class-I-SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>NZ_CP011255.1|WP_010931354.1|3429401_3429869_-|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>NZ_CP011255.1|WP_005013747.1|3428454_3429405_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>NZ_CP011255.1|WP_003818344.1|3425627_3426506_+|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>NZ_CP011255.1|WP_019247959.1|3421722_3424701_+|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>NZ_CP011255.1|WP_005013747.1|3420418_3421369_-|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>NZ_CP011255.1|WP_010931353.1|3419333_3420422_+|NAD(P)H-binding-protein
MTGSTAGKVLVVGALGVVGRAALEHFGQRPGLARVGLSRHAPDFAPEASWVSADLRDAQATRAALAAHGDATHVVYAALNEQPDLLKGWRDSGNVDLNTGMLRNTLDALREAPLRHVTLLQGTKAYGVHTGRPMPVPARETDAVRDHANFYFDQQDLLAERAAAQGFGWTIFRPQIVLGVALGSAMNPVATLGAYAALSREAGQPLRYPGHPHLLTECTDARLIARAIAWAWDEPRAHGEAFNIANGDVVLWQPVFERLAALFGMPLGEPVDTRMREAMPQLAERWRAIAERERLAVPELRDLIGLSWQYADATWAARHPLPVPPLVSTIKLRQAGFGDCIDTQDCIVEHLREMQRLRYLPR
>NZ_CP011255.1|WP_003814742.1|3435166_3435559_-|OsmC-family-protein
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>NZ_CP011255.1|WP_010931357.1|3435696_3436377_+|tellurite-resistance-TerB-family-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>NZ_CP011255.1|WP_023994844.1|3436381_3437353_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>NZ_CP011255.1|WP_077070462.1|3437448_3438399_-|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIPPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>NZ_CP011255.1|WP_003814239.1|3439903_3440605_+|response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>NZ_CP011255.1|WP_010927010.1|3440604_3442029_+|HAMP-domain-containing-protein
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>NZ_CP011255.1|WP_010931360.1|3442045_3443101_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MIATLAASLGLSPDDPSFWMPLVFVGLLLLLMAAGIVLDGFDIGVGLLLQLAPSEERGRMMGLLSPWRDANEFWPLLGLGLFVSAFPFAWGGVLGKLFGPLTVMALGMVLRSVSFEFRIRARTEIKPRWIFGFWVGSLLTALGQGMVLGRIATDYQADSGYGWFAFFVGLCVMAAYALLGACWLVMRVDGELQRRAAGWARHSIRWTAAGMVAIAVTLGLANAGIFYKWSNTAHLGVAAMVWALMLLGFVAAEMLLARLPGKADGFSWLPFVLCVMLFVLMLCGLAYSFFPYLILDDMTIWDGSGALDSMRLVLAGTVIGVPVVLVFNILAYRSVFGKERRPVPLLPPPGA
>NZ_CP011255.1|WP_010931361.1|3443097_3444438_-|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>NZ_CP011255.1|WP_003820957.1|3444553_3446317_+|glutamine--tRNA-ligase/YqeY-domain-fusion-protein
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>NZ_CP011255.1|WP_010931362.1|3446428_3447307_+|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

27282 : 70036

Synechococcus_phage(50.0%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930363.1\|27282_28233_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023995007.1\|28314_28650_-	CoA transferase	NA	NA	NA	NA
WP_010929578.1\|28674_29109_-	OB-fold domain-containing protein	NA	NA	NA	NA
WP_019247164.1\|29141_30359_-	thiolase family protein	NA	NA	NA	NA
WP_010929580.1\|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA
WP_019247165.1\|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010929582.1\|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010929583.1\|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_005012808.1\|34625_35576_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814398.1\|35572_36763_-	MFS transporter	NA	NA	NA	NA
WP_010929585.1\|37012_37924_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_010929586.1\|37925_40064_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003814404.1\|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_003814405.1\|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_010929587.1\|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_019247766.1\|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA
WP_003814412.1\|42687_43218_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
WP_010929588.1\|43663_44614_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929589.1\|45200_45749_+	hypothetical protein	NA	NA	NA	NA
WP_003815265.1\|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003815255.1\|46084_46978_+	AEC family transporter	NA	NA	NA	NA
WP_010929590.1\|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_003817748.1\|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
WP_010929591.1\|50141_51092_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_029443813.1\|51134_52391_+	muropeptide transporter	NA	NA	NA	NA
WP_010929592.1\|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
WP_019247224.1\|54362_54953_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
WP_003817737.1\|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_023852650.1\|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_010929594.1\|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010929584.1\|57497_58448_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929595.1\|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_047122776.1\|60474_60888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010929597.1\|61077_62019_-	hypothetical protein	NA	NA	NA	NA
WP_019248755.1\|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010929599.1\|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_010929600.1\|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_029443770.1\|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_019247832.1\|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA
WP_010929603.1\|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_005012808.1\|69085_70036_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

77634 : 123121

Planktothrix_phage(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|77634_78585_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_041166334.1\|78659_79604_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010929608.1\|79600_81475_-	O-antigen biosynthesis protein WlbL	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
WP_003807102.1\|82822_83527_-	O-antigen biosynthesis protein WlbI	NA	NA	NA	NA
WP_010929609.1\|83523_84696_-	O-antigen biosynthesis protein WlbH	NA	NA	NA	NA
WP_010929610.1\|84891_85485_-	O-antigen biosynthesis protein WlbG	NA	NA	NA	NA
WP_010929611.1\|85481_86714_-	O-antigen biosynthesis protein WlbF	NA	NA	NA	NA
WP_010929612.1\|86731_87991_-	O-antigen biosynthesis protein WlbE	NA	NA	NA	NA
WP_010929613.1\|88014_89103_-	O-antigen biosynthesis protein WlbD	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
WP_010929614.1\|89110_90211_-	O-antigen biosynthesis protein WlbC	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
WP_003807114.1\|90214_90790_-	O-antigen biosynthesis protein WlbB	NA	NA	NA	NA
WP_003807115.1\|90793_91846_-	O-antigen biosynthesis protein WlbA	NA	NA	NA	NA
WP_010929615.1\|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
WP_010929616.1\|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
WP_003807124.1\|94288_94444_-	hypothetical protein	NA	NA	NA	NA
WP_010929617.1\|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA
WP_010929618.1\|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_010929619.1\|96209_97340_+	ABC transporter permease	NA	NA	NA	NA
WP_003807131.1\|97339_98179_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
WP_010929620.1\|99111_99714_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_010929621.1\|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003807138.1\|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.2e-66	40.5
WP_010929622.1\|101833_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA
WP_003818417.1\|102808_103084_+	YbeD family protein	NA	NA	NA	NA
WP_010929623.1\|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_003807146.1\|103815_104817_+	lipoyl synthase	NA	NA	NA	NA
WP_003807148.1\|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
WP_010929624.1\|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_010929625.1\|106330_107392_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
WP_010929626.1\|107427_108378_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929627.1\|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA
WP_010929628.1\|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA
WP_010927242.1\|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_023853376.1\|111936_113619_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_003815933.1\|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA
WP_003815930.1\|114344_114662_+	hypothetical protein	NA	NA	NA	NA
WP_010931363.1\|114944_115961_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003815929.1\|116035_116836_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_003815927.1\|116832_117708_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_010929633.1\|117718_119011_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010929634.1\|119053_120094_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
WP_010929635.1\|120199_121021_-	phosphodiesterase	NA	NA	NA	NA
WP_005012067.1\|121121_122072_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929853.1\|122170_123121_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

165938 : 304608

116

Klosneuvirus(10.53%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005015810.1\|165938_166889_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929659.1\|168332_169235_-	YgcG family protein	NA	NA	NA	NA
WP_003815889.1\|169212_169842_-	LemA family protein	NA	NA	NA	NA
WP_010929660.1\|170124_171555_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-44	29.8
WP_010929661.1\|171588_172218_+	LysE family transporter	NA	NA	NA	NA
WP_003815895.1\|172266_173874_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
WP_010929663.1\|173898_174582_+	hypothetical protein	NA	NA	NA	NA
WP_003815898.1\|174663_175140_-	bacterioferritin	NA	NA	NA	NA
WP_010929765.1\|175346_176297_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929664.1\|177412_177940_+	META domain-containing protein	NA	NA	NA	NA
WP_010929665.1\|178031_178847_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA
WP_003808370.1\|178907_179642_+	sulfurtransferase	NA	NA	NA	NA
WP_010929666.1\|179679_181758_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
WP_003808374.1\|182007_182280_-	hypothetical protein	NA	NA	NA	NA
WP_033446322.1\|182381_183467_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_010929668.1\|183470_185375_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA
WP_024000654.1\|185371_189010_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA
WP_010929670.1\|189070_189634_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
WP_003808385.1\|189641_190064_-	VOC family protein	NA	NA	NA	NA
WP_010929671.1\|190091_190511_-	VOC family protein	NA	NA	NA	NA
WP_076879599.1\|190539_191013_-	GNAT family N-acetyltransferase	Q9AZG4	Lactococcus_phage	2.2e-11	31.1
WP_003808391.1\|191112_191610_+	hypothetical protein	NA	NA	NA	NA
WP_003808393.1\|191764_194035_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA
WP_010929672.1\|194083_195316_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_010929673.1\|196468_197104_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.8e-83	73.8
WP_010929674.1\|197100_197994_+	ZIP family metal transporter	NA	NA	NA	NA
WP_010929675.1\|198388_199489_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA
WP_010929676.1\|199570_199945_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_010929677.1\|200004_202869_+	aminomethyl-transferring glycine dehydrogenase	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
WP_010929678.1\|203013_203754_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_010929679.1\|203823_205035_+	CoA transferase	NA	NA	NA	NA
WP_010929680.1\|205063_206032_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010931070.1\|206645_207596_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929699.1\|207752_208076_+	phosphate starvation-inducible protein	NA	NA	NA	NA
WP_023853200.1\|208180_209221_-	cyclase family protein	NA	NA	NA	NA
WP_010929697.1\|209226_210006_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
WP_003807672.1\|210051_210348_-	YciI family protein	NA	NA	NA	NA
WP_003807674.1\|210373_210649_-	muconolactone Delta-isomerase	NA	NA	NA	NA
WP_003819086.1\|210705_211350_-	CoA transferase subunit B	NA	NA	NA	NA
WP_010929696.1\|211349_212036_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
WP_010929695.1\|212165_213017_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_010929694.1\|213067_213793_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010929693.1\|213824_215174_-	short-chain fatty acid transporter	NA	NA	NA	NA
WP_010929692.1\|215285_216218_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_033446404.1\|216675_219471_-\|protease	serine protease autotransporter SphB1	NA	NA	NA	NA
WP_010929690.1\|220064_223007_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_010929689.1\|223078_223798_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
WP_010929688.1\|223836_224385_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
WP_010929687.1\|224539_225439_+	virginiamycin B lyase	NA	NA	NA	NA
WP_005012808.1\|225463_226414_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003818947.1\|226632_227328_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_019247308.1\|227344_228757_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_010929684.1\|228869_230300_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_010929683.1\|230341_232255_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_010929682.1\|232573_233140_+	preprotein translocase subunit SecD	NA	NA	NA	NA
WP_010929681.1\|233230_234232_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA
WP_005012067.1\|234346_235297_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010927663.1\|235383_236334_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010930742.1\|236330_237281_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929700.1\|237379_238177_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003814363.1\|239126_239537_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_003814358.1\|240558_241302_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003814356.1\|241345_242389_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_003814355.1\|242559_244662_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_003814351.1\|246072_247029_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010929701.1\|247047_247539_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_010929702.1\|247535_248891_-	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
WP_010929703.1\|248891_249590_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_010929704.1\|249586_250288_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
WP_003814339.1\|250540_251590_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
WP_003814337.1\|251695_252637_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_023997118.1\|252633_254523_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	1.3e-78	33.1
WP_003814332.1\|254609_255248_+	VTT domain-containing protein	NA	NA	NA	NA
WP_019247543.1\|255390_256776_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.5e-17	30.3
WP_010929706.1\|256706_257243_-\|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_010929707.1\|257394_258786_+	class II fumarate hydratase	NA	NA	NA	NA
WP_010929708.1\|258802_259783_-	AEC family transporter	NA	NA	NA	NA
WP_003814324.1\|259918_260902_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
WP_010929709.1\|260966_261866_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003814321.1\|261972_263727_+	gamma-glutamyltransferase	NA	NA	NA	NA
WP_010929710.1\|263734_264859_-	CoA transferase	NA	NA	NA	NA
WP_050818140.1\|264872_265850_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_005012067.1\|266580_267531_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929712.1\|268090_268636_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_010929713.1\|268719_270339_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004567834.1\|270354_271509_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_003817696.1\|271522_271648_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
WP_010929714.1\|271644_273396_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
WP_010929715.1\|273392_275072_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
WP_005013747.1\|275179_276130_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929716.1\|276183_276732_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.3e-28	43.1
WP_010929717.1\|277874_278153_+	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_005012067.1\|279196_280147_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929718.1\|280424_280586_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_010929719.1\|280593_280734_+	hypothetical protein	NA	NA	NA	NA
WP_003815821.1\|281252_281702_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
WP_003815819.1\|281711_282323_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_019247426.1\|282481_283336_-	cytochrome c1	NA	NA	NA	NA
WP_005013747.1\|283485_284436_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003815815.1\|285851_286493_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
WP_010929721.1\|286632_287091_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_010927226.1\|287115_287892_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_014906092.1\|287945_289082_+	trypsin-like peptidase domain-containing protein	W5SAB9	Pithovirus	1.2e-07	31.2
WP_005015810.1\|289078_290029_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003807705.1\|290127_290754_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
WP_003807706.1\|290776_291703_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
WP_003819100.1\|291711_293298_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010929723.1\|293294_294299_-	alpha/beta hydrolase	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	7.5e-30	31.5
WP_003807710.1\|294498_295359_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010929724.1\|295390_296392_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_003819104.1\|296462_297272_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003819105.1\|297349_299209_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_010929725.1\|299337_300540_-	MFS transporter	NA	NA	NA	NA
WP_004566082.1\|300653_301535_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004566083.1\|303037_303598_-	5'-3'-deoxyribonucleotidase	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	3.2e-14	30.8
WP_005013747.1\|303657_304608_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

393952 : 451461

Orpheovirus(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|393952_394903_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010927231.1\|395039_395957_+	reductase	NA	NA	NA	NA
WP_003815842.1\|395953_396202_+	glutaredoxin family protein	NA	NA	NA	NA
WP_003815840.1\|396198_397404_+	CoA transferase	NA	NA	NA	NA
WP_014486045.1\|397476_398472_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_014486046.1\|398494_399715_-	CoA transferase	NA	NA	NA	NA
WP_014486047.1\|399711_400356_-	hypothetical protein	NA	NA	NA	NA
WP_010929483.1\|402086_402896_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_014486048.1\|403200_404154_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	5.6e-59	42.5
WP_014486049.1\|404252_405236_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_014486050.1\|405162_405864_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_014486051.1\|405912_406683_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_019247259.1\|406679_407858_-	CoA transferase	NA	NA	NA	NA
WP_014486052.1\|408025_409732_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA
WP_014486053.1\|409728_410625_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014486054.1\|410665_412255_-	rhodanese homology domain-containing protein	NA	NA	NA	NA
WP_003807867.1\|412304_413297_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003807865.1\|413365_413965_-	hypothetical protein	NA	NA	NA	NA
WP_014486055.1\|414425_415406_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010929577.1\|415481_416432_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_047122777.1\|416520_417435_+	DMT family transporter	NA	NA	NA	NA
WP_010929782.1\|417431_418091_+	LysE family translocator	NA	NA	NA	NA
WP_003814709.1\|418180_419104_+	alpha/beta fold hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	4.8e-07	27.2
WP_010929783.1\|419109_419565_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA
WP_010929784.1\|419561_420665_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA
WP_157734656.1\|420623_420893_+	GtrA family protein	NA	NA	NA	NA
WP_010927086.1\|420852_422472_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_003814720.1\|422468_423527_-	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	2.8e-59	40.5
WP_033446199.1\|423656_424151_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_022997984.1\|424243_425221_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929785.1\|425416_426622_+	sodium/glutamate symporter	NA	NA	NA	NA
WP_010929786.1\|426618_428130_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_003814726.1\|428145_429459_-	short-chain fatty acid transporter	NA	NA	NA	NA
WP_003814728.1\|429649_429829_-	hypothetical protein	NA	NA	NA	NA
WP_003814730.1\|430238_430973_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.4e-41	43.8
WP_010929577.1\|433417_434368_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247421.1\|434499_434898_-	GTP-binding protein	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
WP_003814701.1\|435308_435779_-	universal stress protein	NA	NA	NA	NA
WP_003820700.1\|435867_436212_-	TIGR01244 family phosphatase	NA	NA	NA	NA
WP_010929788.1\|436311_437712_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_010929789.1\|439500_440019_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	2.1e-12	38.9
WP_003814694.1\|440129_440885_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
WP_003814691.1\|441080_442313_+	CoA transferase	NA	NA	NA	NA
WP_010929791.1\|442305_443091_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_003814685.1\|443157_444129_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003814681.1\|444139_445117_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019247419.1\|445242_446415_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_010929793.1\|446441_447470_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_003814674.1\|447535_448729_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_005012067.1\|450510_451461_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

593515 : 654703

uncultured_Mediterranean_phage(40.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005013747.1\|593515_594466_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023998122.1\|594962_595832_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_010931496.1\|595828_596650_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_019247235.1\|596846_597338_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_019247236.1\|597356_598430_+	CHAD domain-containing protein	NA	NA	NA	NA
WP_023853086.1\|598476_599580_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_003808577.1\|599655_600276_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_003808574.1\|600296_600806_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.2e-28	42.1
WP_003808570.1\|600860_601112_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.6e-18	53.4
WP_010931494.1\|601175_602309_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA
WP_003808567.1\|602316_602703_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA
WP_010931493.1\|602699_605219_-	AsmA family protein	NA	NA	NA	NA
WP_003808563.1\|605647_605986_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003808562.1\|605982_606489_+	SRPBCC family protein	NA	NA	NA	NA
WP_010931492.1\|606550_607351_-	hypothetical protein	NA	NA	NA	NA
WP_010931491.1\|607461_608403_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010931490.1\|608496_610032_-	M81 family metallopeptidase	NA	NA	NA	NA
WP_010931489.1\|611711_613562_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-17	29.2
WP_003808549.1\|613565_614399_-	ABC transporter permease	NA	NA	NA	NA
WP_010931488.1\|614398_615340_-	ABC transporter permease	NA	NA	NA	NA
WP_010931487.1\|615591_616563_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010931486.1\|616704_618993_+	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_003808542.1\|619299_620208_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_010931485.1\|620262_621228_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010931484.1\|621302_622964_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
WP_010931483.1\|623035_623746_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_005012067.1\|623894_624845_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814152.1\|625543_625927_+	membrane protein	NA	NA	NA	NA
WP_010927005.1\|625984_626587_+	DUF2946 family protein	NA	NA	NA	NA
WP_003820995.1\|626604_627006_-	DoxX family protein	NA	NA	NA	NA
WP_003814158.1\|627139_628033_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010931481.1\|628029_628611_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003814165.1\|629405_630140_+	arginyltransferase	NA	NA	NA	NA
WP_010931480.1\|630180_631230_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_003814172.1\|631377_631956_-	TIGR01841 family phasin	NA	NA	NA	NA
WP_010931479.1\|632342_633320_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA
WP_010931478.1\|633413_637808_-	dermonecrotic toxin	NA	NA	NA	NA
WP_003814178.1\|638008_638857_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_010931477.1\|639015_639828_-	competence/damage-inducible protein A	NA	NA	NA	NA
WP_005015810.1\|639883_640834_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931453.1\|640932_641733_-	EI24 domain-containing protein	NA	NA	NA	NA
WP_003814185.1\|641794_642178_+	thioredoxin family protein	NA	NA	NA	NA
WP_010931454.1\|642189_643623_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
WP_003814188.1\|643829_644159_-	AzlD domain-containing protein	NA	NA	NA	NA
WP_010931455.1\|644161_644911_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_010931456.1\|645093_646014_+	branched-chain amino acid transaminase	NA	NA	NA	NA
WP_003814195.1\|646060_646273_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_010931457.1\|646295_646718_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_010931458.1\|646734_647835_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_010931459.1\|647931_649449_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_003814203.1\|649524_650364_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.1e-66	48.9
WP_003814205.1\|650385_651267_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_003814206.1\|651348_652443_-	porin	NA	NA	NA	NA
WP_076879617.1\|652736_653687_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_041166340.1\|653761_654703_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

660027 : 707267

uncultured_Caudovirales_phage(18.18%)

tail,tRNA,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023995141.1\|660027_661053_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_003814221.1\|661093_661333_+	DNA-binding protein	NA	NA	NA	NA
WP_010931464.1\|661402_662992_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
WP_010931465.1\|662991_663540_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_003814226.1\|663620_664193_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_010927008.1\|664211_665123_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
WP_003814230.1\|665196_666165_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA
WP_010931466.1\|666287_667361_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
WP_010931467.1\|667365_669186_-	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
WP_005015810.1\|669262_670213_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_033446132.1\|670301_670637_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_003819076.1\|670770_671421_+	carbonic anhydrase	NA	NA	NA	NA
WP_010931468.1\|671442_672861_-	amidase	NA	NA	NA	NA
WP_019248554.1\|672930_673686_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019247734.1\|673654_674413_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_010931471.1\|674423_675305_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_010931472.1\|675321_676029_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
WP_010931473.1\|676031_676790_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
WP_010931474.1\|676999_678742_+	nitrite/sulfite reductase	NA	NA	NA	NA
WP_010925795.1\|678734_679259_+	DUF934 domain-containing protein	NA	NA	NA	NA
WP_050818153.1\|679298_680093_-	dioxygenase	NA	NA	NA	NA
WP_019248926.1\|680260_681334_+	hypothetical protein	NA	NA	NA	NA
WP_005012067.1\|681432_682383_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247378.1\|682634_682841_-	hypothetical protein	NA	NA	NA	NA
WP_010931451.1\|682912_683524_-	S24 family peptidase	NA	NA	NA	NA
WP_023853179.1\|684078_684330_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_161633094.1\|684322_685012_+	hypothetical protein	NA	NA	NA	NA
WP_005012067.1\|685268_686219_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_033469562.1\|686858_687344_+\|terminase	terminase	C7U0W1	Enterobacteria_phage	7.3e-39	61.5
WP_010931447.1\|687330_688608_+\|terminase	terminase large subunit	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
WP_010931446.1\|688610_690029_+	DUF4055 domain-containing protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
WP_010931445.1\|690057_691113_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.6e-97	50.6
WP_010931444.1\|691118_691361_+	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
WP_010931443.1\|691483_692086_+	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
WP_005012808.1\|693563_694514_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931442.1\|695188_695440_+	hypothetical protein	NA	NA	NA	NA
WP_019247789.1\|695502_695985_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
WP_010931440.1\|695986_696187_+	hypothetical protein	NA	NA	NA	NA
WP_010931439.1\|696186_696582_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
WP_010931438.1\|696578_696977_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
WP_010931437.1\|696973_697396_+	DUF4128 domain-containing protein	NA	NA	NA	NA
WP_010931436.1\|697403_697904_+	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
WP_010931435.1\|698158_698677_+\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
WP_003813412.1\|698686_699016_+\|tail	phage tail assembly chaperone	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
WP_010931434.1\|699033_699324_+	DUF1799 domain-containing protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
WP_010931433.1\|699349_701962_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
WP_010931432.1\|701971_702331_+	hypothetical protein	NA	NA	NA	NA
WP_010931431.1\|702398_702932_+	DUF1833 family protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
WP_010931430.1\|702928_703318_+	C40 family peptidase	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
WP_010931429.1\|703310_707267_+	DUF1983 domain-containing protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8

DBSCAN-SWA_7

713433 : 767362

Planktothrix_phage(50.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003814636.1\|713433_715164_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
WP_010931419.1\|715216_715645_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_003814641.1\|715647_716328_+	protein TolQ	NA	NA	NA	NA
WP_003814643.1\|716327_716786_+	protein TolR	NA	NA	NA	NA
WP_010931417.1\|717812_719129_+	Tol-Pal system protein TolB	NA	NA	NA	NA
WP_003814650.1\|719160_719658_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
WP_003814652.1\|719744_720434_+	tol-pal system protein YbgF	NA	NA	NA	NA
WP_010931416.1\|720433_721483_+	iron ABC transporter permease	NA	NA	NA	NA
WP_003814657.1\|721479_722274_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
WP_019247923.1\|722442_722793_+	hypothetical protein	NA	NA	NA	NA
WP_019247922.1\|722768_723326_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010929584.1\|724455_725406_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929184.1\|727543_728773_+	spore maturation protein	NA	NA	NA	NA
WP_003814419.1\|728775_730218_-	pyruvate kinase	NA	NA	NA	NA
WP_010931414.1\|730322_731468_+	glycerate kinase	W6LM47	Streptococcus_phage	1.7e-41	42.2
WP_010931413.1\|731499_732297_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_010931412.1\|732321_733881_-	chaperone SurA	NA	NA	NA	NA
WP_010931411.1\|733877_736250_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_010931410.1\|736359_737463_+	phosphotransferase	NA	NA	NA	NA
WP_010931409.1\|737462_738155_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_003814436.1\|738298_739000_+	membrane protein	NA	NA	NA	NA
WP_003814437.1\|738984_739362_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_005012067.1\|740093_741044_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814441.1\|741203_742076_-	oxaloacetate decarboxylase	NA	NA	NA	NA
WP_003814443.1\|742416_742635_+	DUF1059 domain-containing protein	NA	NA	NA	NA
WP_019247242.1\|742674_744054_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_010929976.1\|744095_745493_-	amidase family protein	NA	NA	NA	NA
WP_010927038.1\|745532_747185_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-16	30.8
WP_010929977.1\|747188_748073_-	ABC transporter permease	NA	NA	NA	NA
WP_010929978.1\|748072_749014_-	ABC transporter permease	NA	NA	NA	NA
WP_010929979.1\|749092_750712_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010929980.1\|750878_751694_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_003814459.1\|751761_752331_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_005013747.1\|752331_753282_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814461.1\|753936_755034_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
WP_003814462.1\|755067_756333_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA
WP_010929591.1\|756490_757441_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929982.1\|757684_758275_+	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_010929983.1\|758290_760735_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_003814467.1\|760854_761826_-	FecR family protein	NA	NA	NA	NA
WP_023852739.1\|761957_762482_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_005012067.1\|762441_763392_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929984.1\|763613_765809_-	DUF1156 domain-containing protein	NA	NA	NA	NA
WP_010929985.1\|765881_766310_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005012808.1\|766411_767362_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

818955 : 890968

Acinetobacter_phage(20.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014486111.1\|818955_819906_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930050.1\|820004_820661_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_010930049.1\|820808_823517_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.8e-15	24.0
WP_003813068.1\|823526_824546_+	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.5e-49	35.7
WP_010930048.1\|824542_825493_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003813893.1\|825591_826080_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_003813895.1\|826076_826760_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_010926959.1\|826789_830245_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_010930046.1\|830280_831141_+	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_010930045.1\|831269_832187_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930044.1\|832324_833305_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003813904.1\|833364_835155_+	acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	2.0e-25	26.1
WP_010930042.1\|835151_835928_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930041.1\|835937_836456_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003813909.1\|836568_838839_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_010930039.1\|839050_841282_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_003813915.1\|841582_841912_-	DUF2818 family protein	NA	NA	NA	NA
WP_003813916.1\|841928_843413_-	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA
WP_019247436.1\|843423_844926_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_010930037.1\|844922_846935_-	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_003813920.1\|846952_847261_-	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA
WP_003813921.1\|847257_847905_-	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA
WP_003813924.1\|847922_848411_-	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA
WP_003813926.1\|848432_849506_-	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_010930036.1\|849505_851833_-	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA
WP_003813930.1\|851848_853216_-	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA
WP_003813932.1\|853212_853707_-	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA
WP_024000900.1\|853752_855009_-	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA
WP_010926963.1\|855011_855635_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA
WP_003813941.1\|855709_856186_-	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA
WP_003813943.1\|856222_856582_-	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA
WP_010930034.1\|856770_857928_-	porin	NA	NA	NA	NA
WP_005012067.1\|858240_859191_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247352.1\|859208_859763_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003813949.1\|859764_860199_+	PaaI family thioesterase	NA	NA	NA	NA
WP_003813951.1\|860195_860630_+	hypothetical protein	NA	NA	NA	NA
WP_003813952.1\|860613_861417_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003813954.1\|861433_862249_-	metallophosphoesterase	NA	NA	NA	NA
WP_020699608.1\|862245_863061_-	diacylglycerol kinase	NA	NA	NA	NA
WP_010930033.1\|863207_863909_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003813960.1\|863936_865895_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
WP_005013747.1\|865977_866928_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930032.1\|867148_867817_+	transcriptional regulator	NA	NA	NA	NA
WP_010930031.1\|867940_869047_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_010930030.1\|869059_872173_+	MexW/MexI family multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.5e-57	21.5
WP_010930029.1\|872169_873663_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_010926969.1\|873677_874349_+	transcriptional regulator	NA	NA	NA	NA
WP_003813974.1\|874392_874887_-	azurin	NA	NA	NA	NA
WP_010930027.1\|875027_875675_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023853163.1\|875778_877827_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
WP_010930025.1\|877823_879836_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
WP_010930024.1\|879861_881196_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_003813981.1\|881304_882297_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003813982.1\|882363_884448_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_010930023.1\|884472_885444_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930022.1\|885572_886604_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_010930021.1\|886607_887759_-	cystathionine beta-lyase	NA	NA	NA	NA
WP_076879542.1\|887929_888853_+	transcriptional regulator LrhA	NA	NA	NA	NA
WP_003813987.1\|888930_889755_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010931561.1\|889951_890968_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

898602 : 964605

Bacillus_phage(28.57%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930018.1\|898602_900834_-\|holin	choline BCCT transporter BetT	NA	NA	NA	NA
WP_010930017.1\|901621_902068_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_003813996.1\|902089_902836_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_003813997.1\|902979_903957_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_010930016.1\|904590_905202_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
WP_003813999.1\|905195_906413_-	threonine ammonia-lyase	NA	NA	NA	NA
WP_005013747.1\|906553_907504_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814000.1\|907500_908220_-	lipoprotein	NA	NA	NA	NA
WP_003821234.1\|908340_910500_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_003814002.1\|910590_910860_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_003814003.1\|911153_911681_+	lipoprotein	NA	NA	NA	NA
WP_003814004.1\|911699_912479_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_010930015.1\|912646_913663_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_003814006.1\|913735_914227_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_003814007.1\|914237_915953_-	acetolactate synthase 3 catalytic subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	3.1e-60	30.3
WP_005012067.1\|917116_918067_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930051.1\|918063_919896_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
WP_010930052.1\|920294_920954_+	thiopurine S-methyltransferase	NA	NA	NA	NA
WP_023852837.1\|921047_921194_+	hypothetical protein	NA	NA	NA	NA
WP_003809770.1\|921302_921470_+	hypothetical protein	NA	NA	NA	NA
WP_010930054.1\|921481_922162_-	DUF3313 domain-containing protein	NA	NA	NA	NA
WP_010930055.1\|922443_923160_+	flagellar brake protein	NA	NA	NA	NA
WP_010930056.1\|923174_924476_-	phospholipase A	NA	NA	NA	NA
WP_010930057.1\|929740_931093_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_004568140.1\|931121_931643_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_003819989.1\|931639_933094_+	carboxylase	NA	NA	NA	NA
WP_023852826.1\|933128_933377_+	hypothetical protein	NA	NA	NA	NA
WP_019247557.1\|933482_934358_+	amidohydrolase	NA	NA	NA	NA
WP_010930060.1\|934383_935439_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930061.1\|935451_936243_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010930062.1\|936275_937646_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_005012067.1\|938822_939773_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930064.1\|939825_940047_+	hypothetical protein	NA	NA	NA	NA
WP_003810832.1\|940206_940419_+	hypothetical protein	NA	NA	NA	NA
WP_003810835.1\|940538_941657_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_003810839.1\|942162_942414_+	hypothetical protein	NA	NA	NA	NA
WP_010930066.1\|942525_943476_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003810840.1\|943472_943856_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_023852913.1\|943910_945725_-	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
WP_010930068.1\|945874_946702_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
WP_010930069.1\|946747_947728_+	aldo/keto reductase	NA	NA	NA	NA
WP_003810850.1\|947724_947937_-	hypothetical protein	NA	NA	NA	NA
WP_003810851.1\|947933_949115_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_010930070.1\|949278_950013_+	metallophosphoesterase	A0A2H4J0P0	uncultured_Caudovirales_phage	3.8e-63	49.6
WP_010930071.1\|950014_952627_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_003810859.1\|952762_954676_-	S9 family peptidase	NA	NA	NA	NA
WP_010930072.1\|955291_955702_-	PaaI family thioesterase	NA	NA	NA	NA
WP_003810865.1\|955799_956885_+	DNA polymerase IV	NA	NA	NA	NA
WP_005012067.1\|956983_957934_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931084.1\|958036_958621_+	nitroreductase	NA	NA	NA	NA
WP_003812010.1\|958690_960112_-	argininosuccinate lyase	NA	NA	NA	NA
WP_010931083.1\|960219_961566_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_050818159.1\|961604_963248_+	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	1.9e-86	36.4
WP_003812004.1\|963291_963630_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_005013747.1\|963654_964605_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1042066 : 1099819

Salmonella_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010931070.1\|1042066_1043017_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931041.1\|1046763_1047375_-	DUF2239 family protein	NA	NA	NA	NA
WP_003812368.1\|1047597_1049058_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
WP_010931040.1\|1049154_1050747_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.0e-17	33.3
WP_019247974.1\|1051100_1051358_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003816876.1\|1051359_1052700_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_010931038.1\|1052795_1053485_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_019247976.1\|1053497_1054928_+	MFS transporter	NA	NA	NA	NA
WP_014905903.1\|1056652_1057474_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_010931036.1\|1057484_1059056_+	amidohydrolase	NA	NA	NA	NA
WP_010931035.1\|1059084_1060062_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931034.1\|1060088_1060892_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
WP_024001108.1\|1060888_1061683_+	ABC transporter permease	NA	NA	NA	NA
WP_003816890.1\|1061690_1062926_+	DUF521 domain-containing protein	NA	NA	NA	NA
WP_010931032.1\|1062918_1063353_+	DUF126 domain-containing protein	NA	NA	NA	NA
WP_010931031.1\|1064625_1066353_-	sulfate permease	NA	NA	NA	NA
WP_010931030.1\|1066464_1067823_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_005013747.1\|1068115_1069066_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931029.1\|1069106_1070177_+	FUSC family protein	NA	NA	NA	NA
WP_010931028.1\|1070199_1071078_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_010931027.1\|1071249_1072221_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010931026.1\|1072383_1073226_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010931025.1\|1073387_1074068_+	cupin domain-containing protein	NA	NA	NA	NA
WP_010931024.1\|1074061_1075231_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_010931023.1\|1075227_1076259_+	alcohol dehydrogenase catalytic domain-containing protein	A0A2K9L339	Tupanvirus	1.8e-26	27.8
WP_010931022.1\|1076302_1077544_+	MFS transporter	NA	NA	NA	NA
WP_010931021.1\|1077578_1079111_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_010931020.1\|1079191_1079815_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
WP_010931019.1\|1079845_1080457_+	LysE family translocator	NA	NA	NA	NA
WP_010931018.1\|1080492_1080963_+	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_019248147.1\|1081394_1082399_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_010931017.1\|1082435_1083950_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931016.1\|1083953_1084913_+	ABC transporter permease	NA	NA	NA	NA
WP_010931015.1\|1084941_1085745_+	ABC transporter permease	NA	NA	NA	NA
WP_010931014.1\|1085746_1087381_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
WP_010931013.1\|1087464_1088526_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004567322.1\|1088724_1088994_+	hypothetical protein	NA	NA	NA	NA
WP_010931012.1\|1088997_1089522_+	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
WP_010929591.1\|1089937_1090888_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931011.1\|1090884_1091919_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_003816758.1\|1092027_1092666_+	DedA family protein	NA	NA	NA	NA
WP_019247724.1\|1092960_1093188_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003820420.1\|1093310_1094024_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_005013747.1\|1094268_1095219_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931009.1\|1095322_1095604_+	hypothetical protein	NA	NA	NA	NA
WP_010931008.1\|1095718_1097167_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_010929584.1\|1097277_1098228_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003816756.1\|1098224_1098674_-	dUTP diphosphatase	S4TNT3	Salmonella_phage	3.7e-45	67.2
WP_010929584.1\|1098868_1099819_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

1189510 : 1242690

Salmonella_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005013747.1\|1189510_1190461_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814065.1\|1190627_1190981_+	cytochrome c	NA	NA	NA	NA
WP_003814063.1\|1190993_1191356_+	cytochrome c	NA	NA	NA	NA
WP_003814061.1\|1191397_1191823_-	DUF1841 family protein	NA	NA	NA	NA
WP_003814059.1\|1192025_1193282_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.2e-11	64.8
WP_003814057.1\|1193480_1194461_+	hypothetical protein	NA	NA	NA	NA
WP_005015028.1\|1194610_1195852_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_005013747.1\|1195950_1196901_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814052.1\|1196909_1197605_-	two-component system response regulator KdpE	NA	NA	NA	NA
WP_003814050.1\|1200426_1201026_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA
WP_010930950.1\|1201036_1203202_-	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.2e-24	27.1
WP_010930949.1\|1203225_1205010_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_017685545.1\|1205009_1205099_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
WP_003814042.1\|1205793_1206066_+	DUF4212 domain-containing protein	NA	NA	NA	NA
WP_003814040.1\|1206065_1208132_+	cation acetate symporter	NA	NA	NA	NA
WP_010929577.1\|1208128_1209079_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005015014.1\|1209194_1209527_-	multidrug transporter	NA	NA	NA	NA
WP_010929073.1\|1209523_1210210_-	Smr/MutS family protein	NA	NA	NA	NA
WP_010930948.1\|1210196_1211156_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.1e-57	40.2
WP_003814032.1\|1211197_1213558_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	7.6e-81	48.0
WP_010930946.1\|1213557_1214190_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_010930945.1\|1214291_1215632_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.6e-75	38.9
WP_010930944.1\|1215678_1217034_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-83	47.5
WP_170954289.1\|1217159_1217804_-	hypothetical protein	NA	NA	NA	NA
WP_003814024.1\|1217748_1218066_-	virulence factor	NA	NA	NA	NA
WP_003814023.1\|1218338_1218854_-	hypothetical protein	T1SAR8	Salmonella_phage	5.1e-06	44.6
WP_003814022.1\|1218947_1219109_+	hypothetical protein	NA	NA	NA	NA
WP_003814021.1\|1219124_1219880_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_019247690.1\|1220218_1220425_+	hypothetical protein	NA	NA	NA	NA
WP_003814020.1\|1220432_1221092_-	NAAT family transporter	NA	NA	NA	NA
WP_010930941.1\|1221386_1223591_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA
WP_010930940.1\|1223701_1224925_-	alcaligin siderophore export MFS transporter Bcr	S4TR35	Salmonella_phage	9.8e-24	29.4
WP_003814017.1\|1225047_1226022_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA
WP_005013753.1\|1226089_1227283_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA
WP_003814016.1\|1227297_1228098_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA
WP_010930939.1\|1228094_1229951_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA
WP_003814014.1\|1229947_1230553_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA
WP_003814013.1\|1230571_1231957_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA
WP_003814012.1\|1232682_1233909_+	cation:proton antiporter	NA	NA	NA	NA
WP_003814011.1\|1233997_1234780_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_010929591.1\|1234878_1235829_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814010.1\|1235855_1236629_+	peroxide stress protein YaaA	NA	NA	NA	NA
WP_003814009.1\|1236640_1237882_+	MFS transporter	NA	NA	NA	NA
WP_076879548.1\|1239663_1240614_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930389.1\|1240645_1241743_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.5e-20	37.3
WP_005013747.1\|1241739_1242690_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1284539 : 1352625

Streptococcus_virus(11.11%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930416.1\|1284539_1285028_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_019248504.1\|1285145_1285724_+	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_010930418.1\|1285829_1286198_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA
WP_005012067.1\|1286296_1287247_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023994932.1\|1287253_1288366_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
WP_010930419.1\|1289052_1290255_+	MFS transporter	NA	NA	NA	NA
WP_004568212.1\|1290290_1290437_+	hypothetical protein	NA	NA	NA	NA
WP_010930420.1\|1290458_1293119_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_010930421.1\|1293131_1296536_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_023995689.1\|1297203_1299429_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.2e-43	38.5
WP_010930423.1\|1299475_1299802_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_010930424.1\|1299852_1300461_+	recombination protein RecR	NA	NA	NA	NA
WP_005013747.1\|1300559_1301510_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930425.1\|1301579_1302344_-	hypothetical protein	NA	NA	NA	NA
WP_010930426.1\|1302340_1302940_-	hypothetical protein	NA	NA	NA	NA
WP_010930427.1\|1303043_1303895_-	neutral zinc metallopeptidase	A0A1I9SA48	Rhodococcus_phage	7.0e-37	35.3
WP_010928449.1\|1303954_1304581_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_010929591.1\|1304577_1305528_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019249265.1\|1305626_1306739_-	DUF1513 domain-containing protein	NA	NA	NA	NA
WP_024000672.1\|1306728_1307730_-	imelysin family protein	NA	NA	NA	NA
WP_019247498.1\|1307835_1309347_-	c-type cytochrome	NA	NA	NA	NA
WP_023853587.1\|1309343_1310648_-	imelysin	NA	NA	NA	NA
WP_010930431.1\|1310759_1311320_-	membrane protein	NA	NA	NA	NA
WP_010930432.1\|1311587_1312142_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	1.7e-15	32.0
WP_010930433.1\|1312597_1312813_-	dodecin domain-containing protein	NA	NA	NA	NA
WP_033446228.1\|1313067_1315665_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-21	22.6
WP_010930435.1\|1315661_1316849_+	cupin domain-containing protein	NA	NA	NA	NA
WP_010930436.1\|1317507_1318122_+	serotype 3 fimbrial subunit	NA	NA	NA	NA
WP_010930437.1\|1318210_1319338_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_033446216.1\|1319349_1320255_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_005012067.1\|1321147_1322098_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930439.1\|1322279_1323032_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA
WP_003811112.1\|1323100_1323760_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA
WP_003811113.1\|1323756_1324485_+	glutamine ABC transporter ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	3.3e-35	39.3
WP_010930440.1\|1324497_1326777_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	5.9e-06	32.1
WP_010930441.1\|1326801_1327005_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_010930442.1\|1327046_1327679_-	guanylate kinase	A0A218KC48	Bacillus_phage	2.4e-13	33.9
WP_010930443.1\|1327814_1328732_-	c-type cytochrome	NA	NA	NA	NA
WP_010930444.1\|1328728_1329442_-	c-type cytochrome	NA	NA	NA	NA
WP_003811135.1\|1329679_1330450_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_003811137.1\|1330454_1331054_-	C40 family peptidase	A0A0A8WF62	Clostridium_phage	1.4e-20	41.6
WP_003811138.1\|1331298_1332789_+	AMP nucleosidase	NA	NA	NA	NA
WP_010926696.1\|1332847_1333132_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010930445.1\|1333269_1333425_-	hypothetical protein	NA	NA	NA	NA
WP_003811148.1\|1333697_1334624_-	YicC family protein	NA	NA	NA	NA
WP_003811149.1\|1334760_1335501_+	ribonuclease PH	NA	NA	NA	NA
WP_010930446.1\|1335667_1337044_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_003811152.1\|1337225_1338131_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930448.1\|1339782_1341585_-	EAL domain-containing protein	NA	NA	NA	NA
WP_010930449.1\|1341711_1342353_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_005012808.1\|1342451_1343402_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930450.1\|1343423_1344644_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA
WP_003811164.1\|1344829_1346242_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_003811167.1\|1346305_1347373_+	PAS domain-containing protein	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
WP_010930451.1\|1347372_1348860_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
WP_010930452.1\|1348869_1349814_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003811176.1\|1349973_1350672_+	pirin family protein	NA	NA	NA	NA
WP_010930453.1\|1350749_1351655_+	pirin family protein	NA	NA	NA	NA
WP_005012067.1\|1351674_1352625_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1388574 : 1444164

Brazilian_cedratvirus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010931070.1\|1388574_1389525_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930486.1\|1389583_1390357_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_014486074.1\|1390349_1391906_+	LTA synthase family protein	NA	NA	NA	NA
WP_005013747.1\|1391902_1392853_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003810741.1\|1394179_1394782_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003810743.1\|1395021_1395723_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_003816696.1\|1395716_1396499_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
WP_005012808.1\|1396683_1397634_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930483.1\|1397732_1398470_-	TerC family protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
WP_010926609.1\|1398659_1399418_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930482.1\|1399464_1400454_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930481.1\|1400631_1401600_-	transporter	NA	NA	NA	NA
WP_010930480.1\|1403139_1404108_+	AAA family ATPase	NA	NA	NA	NA
WP_010930479.1\|1404116_1405058_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_010930478.1\|1405531_1406542_+	VWA domain-containing protein	NA	NA	NA	NA
WP_010930477.1\|1406532_1408047_+	VWA domain-containing protein	NA	NA	NA	NA
WP_010930476.1\|1408043_1409390_+	BatD family protein	NA	NA	NA	NA
WP_010930475.1\|1409392_1410427_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
WP_023852967.1\|1410476_1412102_+	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
WP_005012067.1\|1412654_1413605_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930487.1\|1413709_1414657_+	hypothetical protein	NA	NA	NA	NA
WP_019247865.1\|1414710_1416525_-	sensor histidine kinase	NA	NA	NA	NA
WP_010930489.1\|1416517_1417192_-	response regulator transcription factor	NA	NA	NA	NA
WP_023995112.1\|1417321_1420396_+	autotransporter SphB2	NA	NA	NA	NA
WP_019247905.1\|1420409_1420709_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010930492.1\|1421023_1421647_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_010930493.1\|1421890_1422760_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_010930494.1\|1422737_1423682_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019247909.1\|1423767_1424694_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_019247910.1\|1424806_1425586_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930497.1\|1425576_1426773_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_010930498.1\|1426803_1427754_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_010930499.1\|1427975_1428665_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930500.1\|1428729_1429485_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930501.1\|1429536_1430529_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930502.1\|1430538_1431492_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003811538.1\|1431607_1432570_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_019249376.1\|1433971_1434400_+	hypothetical protein	NA	NA	NA	NA
WP_005013747.1\|1434396_1435347_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_170954298.1\|1435640_1436378_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
WP_019249653.1\|1437991_1438372_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010930506.1\|1440091_1441063_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930507.1\|1441076_1441790_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930508.1\|1441794_1442712_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003811452.1\|1442818_1443115_+	hypothetical protein	NA	NA	NA	NA
WP_010929588.1\|1443213_1444164_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1451460 : 1514426

Klosneuvirus(12.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005013747.1\|1451460_1452411_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247780.1\|1452454_1452997_+	hypothetical protein	NA	NA	NA	NA
WP_010930513.1\|1453094_1453943_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
WP_004568494.1\|1453935_1454442_+\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	3.4e-07	38.4
WP_010930515.1\|1454438_1455440_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
WP_010930516.1\|1455452_1456247_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010930517.1\|1456295_1458197_-	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_003810992.1\|1458193_1458817_-	TRAP transporter small permease subunit	NA	NA	NA	NA
WP_003816541.1\|1458943_1460068_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_010930518.1\|1460448_1462053_+	ABC-F family ATPase	A0A1V0SKJ1	Klosneuvirus	1.2e-53	28.9
WP_010930519.1\|1462208_1462985_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
WP_010930520.1\|1463069_1464068_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930521.1\|1464064_1464838_+	ABC transporter permease	NA	NA	NA	NA
WP_005012067.1\|1465822_1466773_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930523.1\|1466810_1467398_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
WP_003811007.1\|1467415_1467799_-	thioredoxin family protein	V9SJ74	Achromobacter_phage	8.1e-09	25.8
WP_003811011.1\|1469158_1470451_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
WP_010930524.1\|1470585_1471626_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
WP_010929632.1\|1471723_1472740_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003811015.1\|1473007_1473655_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_010930526.1\|1473780_1474539_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
WP_019247478.1\|1474523_1475303_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.8e-32	46.9
WP_003811022.1\|1475320_1476205_+	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
WP_004568488.1\|1476201_1476981_+	3'-5' exonuclease	NA	NA	NA	NA
WP_010930528.1\|1477085_1477685_+	hypothetical protein	NA	NA	NA	NA
WP_010930529.1\|1477973_1478726_+	hypothetical protein	NA	NA	NA	NA
WP_003816525.1\|1478844_1480245_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
WP_003816523.1\|1480268_1480667_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_003811035.1\|1480842_1481043_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_010930530.1\|1481181_1481910_+	redoxin family protein	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
WP_003816520.1\|1482043_1483459_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
WP_003816518.1\|1483462_1484326_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_004568486.1\|1484338_1485088_-	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
WP_019247881.1\|1485270_1487286_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_019247882.1\|1487267_1487936_-	arylesterase	NA	NA	NA	NA
WP_005012067.1\|1488710_1489661_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003813572.1\|1489809_1490148_-	BON domain-containing protein	NA	NA	NA	NA
WP_003813570.1\|1490205_1490367_-	DUF1328 domain-containing protein	NA	NA	NA	NA
WP_003813568.1\|1490398_1490599_-	CsbD family protein	NA	NA	NA	NA
WP_010930533.1\|1490864_1493438_-	cyanophycin synthetase	NA	NA	NA	NA
WP_019247811.1\|1493508_1496058_-	cyanophycin synthetase	NA	NA	NA	NA
WP_010930535.1\|1498608_1499097_+	DUF1854 domain-containing protein	NA	NA	NA	NA
WP_029443743.1\|1499188_1500340_-	N-acetyltransferase	NA	NA	NA	NA
WP_004566336.1\|1500393_1501215_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_010930537.1\|1501253_1502483_+	lytic murein transglycosylase	NA	NA	NA	NA
WP_004566334.1\|1502611_1503052_+	DUF937 domain-containing protein	NA	NA	NA	NA
WP_005012808.1\|1503162_1504113_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930538.1\|1504109_1504583_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_033446178.1\|1504744_1505683_+	membrane protein	NA	NA	NA	NA
WP_010930540.1\|1505684_1506893_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
WP_010930541.1\|1506997_1507504_-	lipoprotein signal peptidase	NA	NA	NA	NA
WP_010930542.1\|1507506_1510368_-\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
WP_010930543.1\|1510357_1511323_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_076879626.1\|1511382_1513377_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.4e-21	33.3
WP_010930179.1\|1513475_1514426_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1565684 : 1624954

Klosneuvirus(40.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005013747.1\|1565684_1566635_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930573.1\|1566759_1567569_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010929591.1\|1567769_1568720_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929577.1\|1568818_1569769_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930574.1\|1571042_1572260_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA
WP_003818670.1\|1573316_1574219_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010930576.1\|1574295_1575168_+	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA
WP_003818672.1\|1575298_1575667_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_010930577.1\|1575724_1576771_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_010930578.1\|1576966_1578223_+	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_003810623.1\|1578227_1579565_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_050818134.1\|1579714_1580671_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019247555.1\|1580773_1581706_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA
WP_019247554.1\|1581821_1582142_+	hypothetical protein	NA	NA	NA	NA
WP_019247553.1\|1582134_1582494_+	hypothetical protein	NA	NA	NA	NA
WP_010930581.1\|1582541_1584116_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003810637.1\|1584168_1585113_+	ABC transporter permease	NA	NA	NA	NA
WP_010930582.1\|1585130_1585961_+	ABC transporter permease	NA	NA	NA	NA
WP_010930583.1\|1585953_1587588_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
WP_010930584.1\|1587584_1588940_+	amidase	NA	NA	NA	NA
WP_010930585.1\|1589846_1591424_+	lipoprotein	NA	NA	NA	NA
WP_010930586.1\|1591427_1592702_+	type 4b pilus protein PilO2	NA	NA	NA	NA
WP_010930587.1\|1592799_1593174_+	hypothetical protein	NA	NA	NA	NA
WP_010930588.1\|1594889_1596023_+	general secretion pathway protein	NA	NA	NA	NA
WP_003810661.1\|1596060_1596666_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_010930589.1\|1596662_1597481_+	hypothetical protein	NA	NA	NA	NA
WP_010930590.1\|1597552_1600177_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
WP_004568544.1\|1600163_1600418_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_010930591.1\|1600484_1601066_-	hypothetical protein	NA	NA	NA	NA
WP_010926757.1\|1601369_1601630_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_014905757.1\|1601795_1602419_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003816734.1\|1602418_1603192_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_010930593.1\|1603188_1604397_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_010930594.1\|1604422_1604896_-	RidA family protein	NA	NA	NA	NA
WP_010930048.1\|1604969_1605920_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930796.1\|1606018_1607368_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_023852900.1\|1608133_1608889_+	MipA/OmpV family protein	NA	NA	NA	NA
WP_010930794.1\|1608981_1611864_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
WP_003810689.1\|1612186_1612612_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
WP_004568542.1\|1612639_1613788_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
WP_003810693.1\|1613784_1614291_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010930793.1\|1614297_1615593_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_023995843.1\|1615651_1616938_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_010930791.1\|1616939_1617578_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003810701.1\|1617580_1618741_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
WP_003810703.1\|1618767_1620123_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_010930790.1\|1620126_1621197_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
WP_003810707.1\|1621335_1621572_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_010930789.1\|1621659_1622766_+	GTPase HflX	NA	NA	NA	NA
WP_010930788.1\|1622731_1624036_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_010930787.1\|1624054_1624954_+\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_16

1703930 : 1770430

uncultured_Caudovirales_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010929588.1\|1703930_1704881_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003811361.1\|1704946_1705126_-	hypothetical protein	NA	NA	NA	NA
WP_019247449.1\|1705242_1705998_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_010930310.1\|1705984_1707130_-	DUF3182 family protein	NA	NA	NA	NA
WP_010930208.1\|1708037_1708988_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003811370.1\|1709175_1710378_-	cardiolipin synthase ClsB	NA	NA	NA	NA
WP_003811372.1\|1710374_1711133_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_003811375.1\|1711526_1712159_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010930311.1\|1713114_1715715_+	BP1344/BB2830 family autotransporter	NA	NA	NA	NA
WP_010930312.1\|1715702_1719122_-	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA
WP_010930313.1\|1719129_1720035_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003811381.1\|1720173_1720752_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_010930314.1\|1720748_1721660_+	CoA ester lyase	NA	NA	NA	NA
WP_010930315.1\|1721673_1722354_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010930316.1\|1722555_1724595_+	acetate--CoA ligase family protein	NA	NA	NA	NA
WP_014486069.1\|1724613_1725600_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930317.1\|1725625_1726423_+	citryl-CoA lyase	NA	NA	NA	NA
WP_003811389.1\|1726419_1727613_+	CoA transferase	NA	NA	NA	NA
WP_003811391.1\|1727609_1728572_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003811393.1\|1728589_1729630_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003811396.1\|1729617_1730226_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_010930318.1\|1731814_1732810_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003811400.1\|1732829_1734008_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA
WP_003811401.1\|1734018_1734936_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_010930208.1\|1734991_1735942_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003812022.1\|1736040_1736811_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.8e-30	39.1
WP_003812020.1\|1736807_1737488_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_010930319.1\|1737554_1738343_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931363.1\|1738589_1739606_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010930321.1\|1739911_1741066_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_003817170.1\|1745571_1746054_-	flagellar protein FlgN	NA	NA	NA	NA
WP_003817172.1\|1746071_1746362_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
WP_010930322.1\|1746488_1747199_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
WP_010930323.1\|1747382_1747790_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_003817176.1\|1747802_1748222_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA
WP_010930324.1\|1748269_1748974_+	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA
WP_003817180.1\|1749039_1750461_+	flagellar hook-basal body complex protein	NA	NA	NA	NA
WP_003817181.1\|1750499_1751264_+	flagellar basal body rod protein FlgF	NA	NA	NA	NA
WP_010930325.1\|1751307_1752093_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
WP_010930326.1\|1752092_1752782_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA
WP_010930327.1\|1752784_1753918_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA
WP_010930328.1\|1753935_1754958_+	flagellar assembly peptidoglycan hydrolase FlgJ	A0A088F6W1	Sulfitobacter_phage	1.9e-12	31.4
WP_010930329.1\|1755027_1756674_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA
WP_010930330.1\|1756707_1758240_+	flagellar hook-associated protein FlgL	NA	NA	NA	NA
WP_010930331.1\|1758318_1760139_+	Tar ligand binding domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-11	52.6
WP_010930332.1\|1760259_1761879_+	Tar ligand binding domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-08	45.3
WP_014486070.1\|1762057_1763500_+	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	1.0e-35	41.8
WP_010929632.1\|1763716_1764733_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010930333.1\|1764779_1765568_-	flagellar biosynthetic protein FliR	NA	NA	NA	NA
WP_003811859.1\|1765590_1765860_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_015041547.1\|1765876_1766668_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_003811855.1\|1766679_1767021_-	flagellar biosynthetic protein FliO	NA	NA	NA	NA
WP_010930335.1\|1767031_1767532_-	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_003811852.1\|1767524_1768535_-	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_003811850.1\|1768537_1769110_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_005012067.1\|1769479_1770430_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2372877 : 2446075

Bacillus_virus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010929591.1\|2372877_2373828_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003818523.1\|2374279_2375281_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003810306.1\|2375453_2376311_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA
WP_003810308.1\|2376307_2377570_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
WP_003818524.1\|2377670_2378045_+	tautomerase family protein	NA	NA	NA	NA
WP_010930713.1\|2378117_2379305_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA
WP_010930714.1\|2379389_2380160_+	spermidine synthase	NA	NA	NA	NA
WP_010930715.1\|2380273_2381038_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010930716.1\|2380988_2382290_+	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA
WP_010930717.1\|2382286_2383093_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_003818532.1\|2384837_2385809_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003818533.1\|2385965_2386478_+	superoxide dismutase family protein	Q9MC02	Salmonella_phage	1.8e-43	52.3
WP_010930718.1\|2386636_2387611_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930719.1\|2388611_2389406_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
WP_003818535.1\|2389431_2390238_-	TOBE domain-containing protein	NA	NA	NA	NA
WP_003810329.1\|2390348_2390939_+	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_010930720.1\|2390949_2392128_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_010930721.1\|2392230_2392605_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_019247652.1\|2392857_2394174_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_019247651.1\|2394240_2397471_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_003810344.1\|2398961_2399708_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_010930724.1\|2399792_2400254_+	holo-ACP synthase	NA	NA	NA	NA
WP_010930725.1\|2400291_2401350_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA
WP_010930726.1\|2401312_2403142_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_003810356.1\|2403181_2403754_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_010930727.1\|2405178_2406000_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	4.1e-42	37.6
WP_010930728.1\|2406318_2407641_+	isocitrate lyase	NA	NA	NA	NA
WP_010930729.1\|2408000_2408636_+	membrane protein	NA	NA	NA	NA
WP_076879629.1\|2408595_2409546_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930731.1\|2410416_2411289_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_010930732.1\|2411366_2412506_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930733.1\|2412864_2414121_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_003816691.1\|2414126_2414654_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
WP_003816690.1\|2414658_2415477_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_003816687.1\|2415476_2416199_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930735.1\|2416220_2416535_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_010930736.1\|2416552_2417701_+	CoA transferase	NA	NA	NA	NA
WP_010930737.1\|2417731_2418607_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003816680.1\|2418603_2419923_-	AMP-binding protein	NA	NA	NA	NA
WP_014486081.1\|2419995_2421192_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA
WP_010930739.1\|2421202_2422690_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA
WP_010930740.1\|2425284_2426184_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023852887.1\|2426321_2427287_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930800.1\|2427385_2428336_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005013747.1\|2428557_2429508_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003812024.1\|2429504_2429807_-	SelT/SelW/SelH family protein	NA	NA	NA	NA
WP_003812026.1\|2429966_2430371_+	group III truncated hemoglobin	NA	NA	NA	NA
WP_010930743.1\|2430363_2431590_+	NnrS family protein	NA	NA	NA	NA
WP_003812030.1\|2431586_2432033_+	membrane protein	NA	NA	NA	NA
WP_003812032.1\|2432102_2432885_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_010930744.1\|2432926_2434432_+	M81 family metallopeptidase	NA	NA	NA	NA
WP_019247851.1\|2434717_2435551_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930745.1\|2436988_2437810_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_010930746.1\|2437828_2438683_-	polysaccharide deacetylase	NA	NA	NA	NA
WP_003812044.1\|2438686_2439658_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_076879627.1\|2440342_2440519_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005013747.1\|2441004_2441955_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003812172.1\|2443092_2443389_-	hypothetical protein	NA	NA	NA	NA
WP_019247707.1\|2443563_2444916_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-45	27.6
WP_010930153.1\|2445058_2446075_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2595335 : 2638834

Bacillus_phage(50.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|2595335_2596286_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003813574.1\|2596384_2597266_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_003821443.1\|2597343_2598723_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_010930218.1\|2598761_2599607_-	FTR1 family protein	NA	NA	NA	NA
WP_003813580.1\|2599622_2599967_-	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_010930217.1\|2599969_2600506_-	iron transporter	NA	NA	NA	NA
WP_003813585.1\|2600678_2601254_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
WP_003813586.1\|2601356_2602094_-	acetoacetyl-CoA reductase	NA	NA	NA	NA
WP_010930216.1\|2602161_2603799_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
WP_019247742.1\|2603906_2604662_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
WP_010930214.1\|2604649_2605612_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_003813594.1\|2605713_2606514_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_010930213.1\|2606575_2608651_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
WP_010930212.1\|2608815_2611191_+	RNA-binding transcriptional accessory protein Tex	NA	NA	NA	NA
WP_010930211.1\|2611271_2612627_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_003813618.1\|2614105_2614828_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930207.1\|2614882_2615866_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_005012067.1\|2615995_2616946_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_077070465.1\|2617044_2617995_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930048.1\|2618093_2619044_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003813621.1\|2619040_2619943_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930206.1\|2620030_2620789_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_023853245.1\|2620801_2621893_-	cell division protein ZapE	NA	NA	NA	NA
WP_003813626.1\|2621990_2623418_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
WP_010930204.1\|2623647_2624862_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
WP_003813631.1\|2624907_2627778_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_005013747.1\|2628102_2629053_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930202.1\|2631237_2631726_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_010930201.1\|2631851_2634548_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA
WP_010930200.1\|2634702_2636985_+	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_019248935.1\|2637161_2637785_+	serotype 2 fimbrial subunit	NA	NA	NA	NA
WP_010930198.1\|2637883_2638834_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2660752 : 2775069

uncultured_Mediterranean_phage(17.65%)

holin,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930190.1\|2660752_2662273_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-82	36.0
WP_003812436.1\|2662600_2663233_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_010930188.1\|2663311_2665177_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	9.3e-50	23.3
WP_020699602.1\|2665173_2665968_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-11	23.3
WP_010930186.1\|2665996_2667112_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930185.1\|2668016_2668895_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_010930184.1\|2668894_2669719_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.0e-08	22.7
WP_005012067.1\|2669886_2670837_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930183.1\|2671049_2673899_+	EAL domain-containing protein	NA	NA	NA	NA
WP_010930182.1\|2673880_2674609_-	response regulator transcription factor	NA	NA	NA	NA
WP_010930181.1\|2674749_2676213_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
WP_010930180.1\|2676209_2676581_-	DUF2069 domain-containing protein	NA	NA	NA	NA
WP_003812701.1\|2676598_2677912_+	YihY family inner membrane protein	NA	NA	NA	NA
WP_003812703.1\|2677948_2678407_+	CBS domain-containing protein	NA	NA	NA	NA
WP_010930178.1\|2679466_2680480_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_003812707.1\|2680619_2681606_+	homoserine kinase	NA	NA	NA	NA
WP_161633091.1\|2681964_2682672_-	DUF192 domain-containing protein	NA	NA	NA	NA
WP_076879620.1\|2683252_2684203_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003809618.1\|2684354_2684957_-	YhbY family RNA-binding protein	NA	NA	NA	NA
WP_010930175.1\|2684975_2685608_+	RlmE family RNA methyltransferase	NA	NA	NA	NA
WP_162096758.1\|2685652_2685904_-	hypothetical protein	NA	NA	NA	NA
WP_010930174.1\|2685845_2687732_+\|protease	ATP-dependent zinc metalloprotease FtsH	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
WP_010930173.1\|2687750_2688593_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
WP_003819875.1\|2688589_2689948_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_003809629.1\|2690168_2690963_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_010930172.1\|2691193_2692687_-	exopolyphosphatase	NA	NA	NA	NA
WP_010930171.1\|2692922_2695004_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_014486066.1\|2695198_2696239_+	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
WP_010930169.1\|2696373_2697390_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_003809638.1\|2697411_2698269_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_010930167.1\|2698313_2699090_+	phosphate ABC transporter ATP-binding protein PstB	G9BWD6	Planktothrix_phage	4.3e-17	28.7
WP_005012067.1\|2699457_2700408_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931070.1\|2700506_2701457_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003809441.1\|2701483_2701948_-	barstar family protein	NA	NA	NA	NA
WP_014486065.1\|2703154_2705443_-	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_010930165.1\|2705559_2706432_-	hypothetical protein	NA	NA	NA	NA
WP_010930164.1\|2706474_2707629_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_010930163.1\|2707663_2708494_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_023853525.1\|2708577_2710122_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA
WP_010930161.1\|2710164_2710524_-	hypothetical protein	NA	NA	NA	NA
WP_003819794.1\|2710525_2710939_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_003809432.1\|2710979_2711297_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_003809431.1\|2711381_2712098_-	hypothetical protein	NA	NA	NA	NA
WP_010930160.1\|2712361_2713783_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_062826590.1\|2716830_2717847_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010930157.1\|2718182_2718824_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_003809423.1\|2718914_2720351_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
WP_023853534.1\|2720508_2721582_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_010930155.1\|2721578_2722715_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
WP_003809416.1\|2722859_2723204_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
WP_010930154.1\|2723270_2725151_+	protein translocase subunit SecD	NA	NA	NA	NA
WP_003809411.1\|2725200_2726136_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
WP_062826590.1\|2726468_2727485_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_015041211.1\|2728422_2729850_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_010930151.1\|2729846_2730869_+	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
WP_003809396.1\|2730858_2731332_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_010930149.1\|2731472_2732360_+	CBS domain-containing protein	NA	NA	NA	NA
WP_063389778.1\|2732356_2734000_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_010930148.1\|2733996_2735046_-	aldo/keto reductase	NA	NA	NA	NA
WP_010929632.1\|2735834_2736851_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003817162.1\|2736950_2737583_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_003811911.1\|2737591_2737981_-	chemotaxis response regulator CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
WP_010930146.1\|2738033_2739086_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_005012067.1\|2739501_2740452_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005013747.1\|2740550_2741501_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930145.1\|2742047_2743754_-	Tar ligand binding domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
WP_003811919.1\|2743827_2744328_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_010930144.1\|2744342_2746400_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_019247393.1\|2746426_2746720_-	response regulator	NA	NA	NA	NA
WP_003817154.1\|2746821_2747769_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_003811927.1\|2747781_2748657_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_003811929.1\|2748777_2749338_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_010930143.1\|2749372_2749696_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_003811933.1\|2750131_2750869_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
WP_005012067.1\|2751167_2752118_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003809486.1\|2752361_2752625_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_003819817.1\|2752698_2752980_+	hypothetical protein	NA	NA	NA	NA
WP_010930142.1\|2752996_2753857_-	M23 family metallopeptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
WP_003809479.1\|2753853_2754189_-	hypothetical protein	NA	NA	NA	NA
WP_010930141.1\|2754242_2754893_-	molybdopterin adenylyltransferase	NA	NA	NA	NA
WP_010930140.1\|2755077_2756553_+	inorganic phosphate transporter	NA	NA	NA	NA
WP_019247197.1\|2756573_2757518_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_003809467.1\|2757563_2757881_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_010930139.1\|2757883_2758822_-	DnaJ domain-containing protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
WP_003819814.1\|2758999_2759485_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_010930138.1\|2759503_2760052_+	DinB family protein	NA	NA	NA	NA
WP_023994624.1\|2760083_2760236_+	hypothetical protein	NA	NA	NA	NA
WP_023853531.1\|2760328_2761462_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010930137.1\|2761565_2762207_+	glutathione transferase	NA	NA	NA	NA
WP_010930136.1\|2762361_2764710_+	DUF3141 domain-containing protein	NA	NA	NA	NA
WP_003809454.1\|2764706_2765645_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_010930135.1\|2765670_2766861_+	acetate kinase	NA	NA	NA	NA
WP_010930134.1\|2766857_2767631_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_010930133.1\|2767660_2768854_-	phosphoglycerate kinase	NA	NA	NA	NA
WP_010930132.1\|2768971_2769982_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_010930131.1\|2769999_2772036_-	transketolase	NA	NA	NA	NA
WP_010930130.1\|2772230_2772971_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_005012067.1\|2773069_2774020_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012808.1\|2774118_2775069_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2820479 : 2875841

Streptococcus_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010929591.1\|2820479_2821430_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_033446303.1\|2821528_2822113_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_003821513.1\|2822147_2823137_-	ADP-glyceromanno-heptose 6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
WP_010930105.1\|2823133_2824075_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
WP_010930104.1\|2824071_2825292_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
WP_010930103.1\|2825334_2825649_-	DUF1049 domain-containing protein	NA	NA	NA	NA
WP_010930102.1\|2825840_2826200_-	integration host factor subunit beta	NA	NA	NA	NA
WP_010930101.1\|2826201_2827917_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_010930100.1\|2828104_2828776_-	(d)CMP kinase	NA	NA	NA	NA
WP_010930099.1\|2828790_2830119_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_010930098.1\|2830115_2831015_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
WP_010930097.1\|2831101_2832187_-	prephenate dehydratase	NA	NA	NA	NA
WP_010930096.1\|2832179_2833313_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	6.4e-78	44.0
WP_010930095.1\|2833312_2835994_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
WP_010930094.1\|2836364_2836946_+	OmpA family protein	NA	NA	NA	NA
WP_010930093.1\|2837071_2837797_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA
WP_010930092.1\|2837793_2838471_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_010930091.1\|2838686_2839868_+	MFS transporter	NA	NA	NA	NA
WP_010930090.1\|2840640_2840823_+	type II toxin-antitoxin system HicA family toxin	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
WP_010929584.1\|2840852_2841803_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_004566317.1\|2841932_2842325_+	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
WP_003821497.1\|2842601_2843513_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
WP_010930088.1\|2843637_2844612_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_005012067.1\|2844608_2845559_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931085.1\|2845693_2846800_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010931086.1\|2846810_2847908_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_010931087.1\|2848052_2849258_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA
WP_010931088.1\|2849264_2849786_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
WP_010931089.1\|2849782_2850274_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
WP_003819740.1\|2850270_2850522_-	MoaD/ThiS family protein	NA	NA	NA	NA
WP_003819741.1\|2850502_2850988_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_010931090.1\|2851123_2854585_+	DUF748 domain-containing protein	NA	NA	NA	NA
WP_010931091.1\|2854602_2855487_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_010931092.1\|2855496_2855928_-	lipoprotein	NA	NA	NA	NA
WP_003809348.1\|2856174_2856678_+	peroxiredoxin	M1I839	Pelagibacter_phage	1.8e-24	44.1
WP_010931094.1\|2856755_2858156_+	MFS transporter	NA	NA	NA	NA
WP_010931095.1\|2858230_2859106_-	membrane protein	NA	NA	NA	NA
WP_023853546.1\|2859102_2860110_-	biotin synthase BioB	NA	NA	NA	NA
WP_010931097.1\|2860577_2860883_+	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_003819753.1\|2860973_2861564_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010930320.1\|2861754_2862771_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010931098.1\|2862962_2865299_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
WP_003812014.1\|2865381_2865816_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_005013747.1\|2865914_2866865_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931099.1\|2866861_2867656_-	N-formylglutamate deformylase	NA	NA	NA	NA
WP_010931100.1\|2867687_2868392_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010931101.1\|2868466_2869267_-	SURF1 family protein	NA	NA	NA	NA
WP_003809276.1\|2869263_2869671_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
WP_003819722.1\|2869667_2870309_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
WP_010931102.1\|2870301_2872302_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_010931103.1\|2873562_2874894_+	MFS transporter	NA	NA	NA	NA
WP_005012067.1\|2874890_2875841_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

2890318 : 2953870

uncultured_Mediterranean_phage(28.57%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930800.1\|2890318_2891269_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_024000608.1\|2891599_2895421_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_010931111.1\|2895577_2896246_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_014905522.1\|2896250_2897924_-	MCE family protein	NA	NA	NA	NA
WP_003820402.1\|2897942_2899262_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA
WP_010931114.1\|2899266_2901582_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.1e-164	41.9
WP_010931115.1\|2901637_2903806_-	penicillin-binding protein 1C	NA	NA	NA	NA
WP_010931116.1\|2903802_2908992_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA
WP_003820400.1\|2909081_2909396_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
WP_003812875.1\|2909623_2909869_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
WP_003820399.1\|2909963_2910482_+	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.1e-14	42.2
WP_010931117.1\|2910581_2911787_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_019247560.1\|2911902_2913300_-	chloride channel protein	NA	NA	NA	NA
WP_010931119.1\|2913416_2913995_-	superoxide dismutase [Fe]	NA	NA	NA	NA
WP_010931120.1\|2914067_2915459_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
WP_005012067.1\|2915626_2916577_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003812889.1\|2916857_2917478_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_010931122.1\|2917474_2917888_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_010931123.1\|2917884_2918928_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_003812895.1\|2918983_2919172_+	Trm112 family protein	NA	NA	NA	NA
WP_010931124.1\|2919181_2919946_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_010931125.1\|2920036_2920693_+	adenylate kinase	NA	NA	NA	NA
WP_010931126.1\|2920784_2921543_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_010931127.1\|2921568_2923170_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_010931128.1\|2923370_2924375_+	FecR domain-containing protein	NA	NA	NA	NA
WP_003812908.1\|2924475_2924739_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_010931129.1\|2924856_2925633_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
WP_010931130.1\|2928508_2929621_-	Ldh family oxidoreductase	NA	NA	NA	NA
WP_010929584.1\|2929677_2930628_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003813070.1\|2930836_2931058_-	YgdI/YgdR family lipoprotein	NA	NA	NA	NA
WP_010931131.1\|2931271_2932678_-	threonine synthase	NA	NA	NA	NA
WP_003813074.1\|2932674_2933979_-	homoserine dehydrogenase	NA	NA	NA	NA
WP_010931132.1\|2933975_2935163_-	alanine transaminase	NA	NA	NA	NA
WP_003813077.1\|2935379_2935832_+	Xcc1710-like domain-containing protein	NA	NA	NA	NA
WP_003813079.1\|2935834_2936299_+	peroxiredoxin	NA	NA	NA	NA
WP_003813085.1\|2938161_2939139_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_010931134.1\|2939218_2940187_+	bile acid:sodium symporter	NA	NA	NA	NA
WP_003813089.1\|2940207_2941581_-	replicative DNA helicase	C7BGG1	Burkholderia_phage	4.0e-135	58.2
WP_003813091.1\|2941577_2942414_-	hypothetical protein	NA	NA	NA	NA
WP_010931135.1\|2942530_2942986_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_003813094.1\|2943001_2943274_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_003813095.1\|2943366_2943690_-	primosomal replication protein N	NA	NA	NA	NA
WP_010926331.1\|2943737_2944118_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_003813103.1\|2944337_2945135_-	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_010931136.1\|2945291_2947154_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_003820295.1\|2947203_2948115_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_003813109.1\|2948119_2948386_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_010931137.1\|2948472_2949342_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_010931138.1\|2949477_2950443_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003813114.1\|2950613_2951624_+	acyltransferase family protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	3.6e-16	24.6
WP_010931139.1\|2951771_2952923_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_005012067.1\|2952919_2953870_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

2961013 : 3015244

Planktothrix_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010929591.1\|2961013_2961964_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023852715.1\|2962084_2962981_-	inositol monophosphatase	NA	NA	NA	NA
WP_003814547.1\|2965258_2967484_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA
WP_003814544.1\|2967648_2968737_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	8.7e-32	36.4
WP_019247918.1\|2968693_2969347_+	ABC transporter permease	NA	NA	NA	NA
WP_010931144.1\|2969394_2970192_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930176.1\|2970723_2971674_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247277.1\|2971748_2972903_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_005012067.1\|2972959_2973910_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814535.1\|2974008_2974314_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003820797.1\|2974342_2974777_-	DUF126 domain-containing protein	NA	NA	NA	NA
WP_010931147.1\|2974778_2976023_-	DUF521 domain-containing protein	NA	NA	NA	NA
WP_003820799.1\|2976019_2976730_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_033446288.1\|2976744_2977656_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010931149.1\|2978018_2978423_+	hypothetical protein	NA	NA	NA	NA
WP_019247890.1\|2978419_2978878_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_019247891.1\|2978884_2979793_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_010931150.1\|2979789_2980656_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_003814524.1\|2980642_2981470_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_003820806.1\|2981480_2982608_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
WP_023852748.1\|2983685_2984924_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010931152.1\|2984965_2986228_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_010931153.1\|2986234_2986987_+	DNA-binding protein	NA	NA	NA	NA
WP_019248355.1\|2987038_2987224_-	hypothetical protein	NA	NA	NA	NA
WP_003820813.1\|2987499_2987964_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
WP_003820814.1\|2987995_2988655_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_010931154.1\|2988799_2990908_+	AsmA family protein	NA	NA	NA	NA
WP_076879634.1\|2990904_2991855_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931155.1\|2991958_2992579_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010931156.1\|2992670_2993423_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_019248356.1\|2994557_2995682_-	hypothetical protein	NA	NA	NA	NA
WP_019247402.1\|2995727_2996096_-	hypothetical protein	NA	NA	NA	NA
WP_005012067.1\|2996337_2997288_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247492.1\|2998323_2998866_-	hypothetical protein	NA	NA	NA	NA
WP_010930176.1\|2999251_3000202_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023997028.1\|3000198_3001164_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003815281.1\|3001233_3002070_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
WP_010931158.1\|3002582_3003692_+	porin	NA	NA	NA	NA
WP_010929591.1\|3003753_3004704_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931159.1\|3004896_3005679_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010931160.1\|3005692_3006442_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	1.2e-11	26.4
WP_010931161.1\|3006469_3007816_-	MFS transporter	NA	NA	NA	NA
WP_050681005.1\|3007841_3008771_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003819549.1\|3008886_3009792_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010931163.1\|3009809_3011009_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_010931164.1\|3011081_3011774_-	HD domain-containing protein	A0A1D6Y7U0	Golden_Marseillevirus	4.7e-07	29.9
WP_010931165.1\|3011822_3014249_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.2e-86	33.8
WP_023853143.1\|3014293_3015244_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

3127318 : 3191151

Pseudomonas_phage(30.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005015810.1\|3127318_3128269_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_047122802.1\|3128414_3129539_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	3.8e-38	33.3
WP_023853315.1\|3129744_3130308_+	isochorismatase family protein	NA	NA	NA	NA
WP_003814871.1\|3131302_3131785_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_003814873.1\|3131942_3133190_-	serine hydroxymethyltransferase	A0A219YCZ0	Aeromonas_phage	1.1e-99	52.7
WP_003820605.1\|3133409_3134066_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_003814877.1\|3134101_3135331_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_005012067.1\|3135598_3136549_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931221.1\|3136640_3138056_+	peptidoglycan DD-metalloendopeptidase family protein	A8ATH6	Listeria_phage	1.9e-18	46.9
WP_010931222.1\|3138061_3139198_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_003814883.1\|3139267_3139639_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	4.7e-30	56.9
WP_010931223.1\|3139726_3140473_-	membrane protein	NA	NA	NA	NA
WP_003820599.1\|3140509_3141574_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_010931224.1\|3141762_3142155_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_010927106.1\|3142164_3142593_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004567739.1\|3142888_3143986_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_004567741.1\|3144327_3145692_-\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_023853313.1\|3145750_3146302_+	ribosome-associated protein	NA	NA	NA	NA
WP_010931226.1\|3146315_3146990_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_010931227.1\|3148246_3149056_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.6e-33	37.9
WP_010931228.1\|3149058_3149895_+	ABC transporter permease	NA	NA	NA	NA
WP_003820594.1\|3149909_3150602_+	cysteine hydrolase	NA	NA	NA	NA
WP_003820593.1\|3150613_3151003_-	VOC family protein	NA	NA	NA	NA
WP_003820592.1\|3151108_3152497_-	ATP-dependent RNA helicase DbpA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	4.6e-54	33.5
WP_010931229.1\|3152613_3154110_-	membrane protein	NA	NA	NA	NA
WP_005012067.1\|3155178_3156129_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931231.1\|3156125_3158585_-	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003814917.1\|3158681_3160127_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_010931233.1\|3160130_3161318_-	MFS transporter	NA	NA	NA	NA
WP_023998238.1\|3161386_3161896_-	lipoprotein	NA	NA	NA	NA
WP_003814925.1\|3162097_3162550_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_192855352.1\|3162522_3163089_-	hypothetical protein	NA	NA	NA	NA
WP_019247415.1\|3163111_3166174_+	indolepyruvate ferredoxin oxidoreductase family protein	NA	NA	NA	NA
WP_010931235.1\|3166479_3169407_+	ribonucleoside-diphosphate reductase subunit alpha	A0A2H4P767	Pseudomonas_phage	3.4e-171	43.9
WP_003814929.1\|3169428_3170625_+	ribonucleotide-diphosphate reductase subunit beta	A0A2H4P762	Pseudomonas_phage	1.0e-33	28.9
WP_010931236.1\|3170942_3171470_+	histone H1-like DNA-binding protein	NA	NA	NA	NA
WP_010931237.1\|3171608_3172184_+	YggT family protein	NA	NA	NA	NA
WP_010931238.1\|3172191_3173655_-	D-alanine--poly(phosphoribitol) ligase	A0A2K9L3I8	Tupanvirus	7.3e-26	25.1
WP_010931239.1\|3173665_3174793_-	membrane-bound O-acyltransferase	A0A125RNP0	Pseudomonas_phage	3.7e-25	30.8
WP_003814941.1\|3174922_3176050_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_003814943.1\|3176075_3176315_-	acyl carrier protein	NA	NA	NA	NA
WP_010931240.1\|3176595_3177099_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_010931241.1\|3177271_3178213_-	carbohydrate kinase family protein	NA	NA	NA	NA
WP_010931242.1\|3178224_3179322_-	DUF3426 domain-containing protein	NA	NA	NA	NA
WP_003814951.1\|3180287_3181634_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_003814952.1\|3181643_3182093_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_003814953.1\|3182182_3182617_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_023853327.1\|3182695_3183244_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_003814955.1\|3183326_3184697_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
WP_010931244.1\|3184707_3185301_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_014486102.1\|3185372_3187256_+	RNB domain-containing ribonuclease	NA	NA	NA	NA
WP_010931246.1\|3187293_3188193_+	TonB family protein	NA	NA	NA	NA
WP_010931247.1\|3188189_3189053_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_077070127.1\|3189151_3190102_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012067.1\|3190200_3191151_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

3384658 : 3438399

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010929956.1\|3384658_3385609_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931336.1\|3386013_3386658_-	urease accessory protein UreG	NA	NA	NA	NA
WP_019247677.1\|3386682_3387267_-	urease accessory protein UreF	NA	NA	NA	NA
WP_014905506.1\|3387367_3387985_-	urease accessory protein UreE	NA	NA	NA	NA
WP_010931337.1\|3387987_3389703_-	urease subunit alpha	NA	NA	NA	NA
WP_010931338.1\|3389699_3390008_-	urease subunit beta	NA	NA	NA	NA
WP_003814828.1\|3390024_3390642_-	HupE/UreJ family protein	NA	NA	NA	NA
WP_010931340.1\|3390686_3390989_-	urease subunit gamma	NA	NA	NA	NA
WP_003814832.1\|3391089_3391944_-	urease accessory protein UreD	NA	NA	NA	NA
WP_124740609.1\|3392131_3392356_-	hypothetical protein	NA	NA	NA	NA
WP_010929281.1\|3392525_3392798_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_010929282.1\|3393215_3393623_-	GFA family protein	NA	NA	NA	NA
WP_010931341.1\|3393992_3394787_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010927102.1\|3394887_3396123_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
WP_003814852.1\|3396191_3397208_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010931342.1\|3397219_3398596_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_003814856.1\|3398592_3399789_+	MFS transporter	NA	NA	NA	NA
WP_003814858.1\|3399785_3401324_-	SpoVR family protein	NA	NA	NA	NA
WP_010931343.1\|3401320_3402580_-	YeaH/YhbH family protein	NA	NA	NA	NA
WP_005012067.1\|3404520_3405471_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931344.1\|3406237_3407332_-	CoA transferase	NA	NA	NA	NA
WP_019247312.1\|3407324_3408659_-	AMP-binding protein	NA	NA	NA	NA
WP_003808193.1\|3408612_3409296_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003808195.1\|3409321_3410485_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_004566224.1\|3410481_3411483_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_010931346.1\|3411482_3412355_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_010931347.1\|3412351_3413101_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
WP_010931348.1\|3413097_3413889_-	ATP-binding cassette domain-containing protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
WP_010931349.1\|3413885_3415025_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_047122778.1\|3415300_3416086_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_014486103.1\|3416119_3416902_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_010931351.1\|3416905_3417295_+	OB-fold domain-containing protein	NA	NA	NA	NA
WP_010931352.1\|3418434_3419298_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA
WP_010931353.1\|3419333_3420422_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_005013747.1\|3420418_3421369_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247959.1\|3421722_3424701_+	hypothetical protein	NA	NA	NA	NA
WP_003818344.1\|3425627_3426506_+	fatty acid desaturase	NA	NA	NA	NA
WP_005013747.1\|3428454_3429405_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931354.1\|3429401_3429869_-	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
WP_010931355.1\|3429911_3430682_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_010927090.1\|3430702_3431503_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_010931356.1\|3431513_3432923_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_003814739.1\|3433017_3433803_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_023994644.1\|3434042_3435059_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003814742.1\|3435166_3435559_-	OsmC family protein	NA	NA	NA	NA
WP_010931357.1\|3435696_3436377_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_023994844.1\|3436381_3437353_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_077070462.1\|3437448_3438399_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_25

3444553 : 3503853

Acinetobacter_phage(27.27%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003820957.1\|3444553_3446317_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
WP_010931362.1\|3446428_3447307_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_003814250.1\|3447419_3448235_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_003814252.1\|3448238_3448490_+	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_010930525.1\|3448574_3449591_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003814254.1\|3449921_3450143_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_019247693.1\|3452503_3453421_-	DMT family transporter	NA	NA	NA	NA
WP_019247692.1\|3453918_3455127_-	ABC transporter permease	NA	NA	NA	NA
WP_010931365.1\|3455206_3456778_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003814275.1\|3456895_3457831_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003814277.1\|3458019_3458964_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
WP_003814283.1\|3459531_3465249_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
WP_010931367.1\|3465254_3466382_+	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	3.8e-38	37.8
WP_003814287.1\|3466437_3467064_+	aminotransferase class IV	NA	NA	NA	NA
WP_010931363.1\|3467335_3468352_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010927020.1\|3468447_3469158_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010931368.1\|3469154_3470144_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010931369.1\|3470239_3471871_+	AMP-binding protein	NA	NA	NA	NA
WP_010931370.1\|3471873_3472611_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_019247745.1\|3472766_3473639_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_003814298.1\|3473907_3475128_+	MFS transporter	NA	NA	NA	NA
WP_003814300.1\|3475124_3475784_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_003814302.1\|3475855_3476488_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_010931372.1\|3476517_3477036_+	flavin reductase family protein	NA	NA	NA	NA
WP_010931373.1\|3477046_3478156_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003814312.1\|3478202_3479057_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_010931374.1\|3479058_3479961_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005012067.1\|3481183_3482134_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_014905441.1\|3483890_3484880_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247413.1\|3484876_3485035_+	hypothetical protein	NA	NA	NA	NA
WP_010931375.1\|3485055_3485844_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
WP_003817833.1\|3485840_3486872_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
WP_003815390.1\|3486890_3487454_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
WP_010931376.1\|3487509_3489030_-	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
WP_010931377.1\|3489293_3489998_-	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_003815384.1\|3490005_3490743_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003815381.1\|3490848_3491223_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_003815379.1\|3491265_3492555_+	murein transglycosylase A	NA	NA	NA	NA
WP_010931378.1\|3492551_3493721_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA
WP_010931379.1\|3493717_3494557_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA
WP_010931380.1\|3494616_3495552_+	D-2-hydroxyacid dehydrogenase family protein	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
WP_005012067.1\|3495564_3496515_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931381.1\|3496613_3497576_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
WP_003817821.1\|3497607_3497967_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_010931382.1\|3498091_3498994_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
WP_010931383.1\|3498995_3500768_-	M61 family metallopeptidase	NA	NA	NA	NA
WP_003815367.1\|3500802_3501579_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_023852617.1\|3502902_3503853_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_26

3518791 : 3587944

Planktothrix_phage(10.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012808.1\|3518791_3519742_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931392.1\|3519870_3521004_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_010931393.1\|3521047_3521953_-	hydrolase	NA	NA	NA	NA
WP_023852622.1\|3521955_3523656_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-15	32.7
WP_010931394.1\|3523652_3524573_-	ABC transporter permease	NA	NA	NA	NA
WP_003817805.1\|3524580_3525558_-	ABC transporter permease	NA	NA	NA	NA
WP_010931395.1\|3525616_3526651_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_003815317.1\|3528625_3528862_-	hypothetical protein	NA	NA	NA	NA
WP_010931396.1\|3528988_3529852_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_003815315.1\|3529940_3530762_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_003815313.1\|3530841_3531579_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010931397.1\|3531575_3532568_-	nitronate monooxygenase	NA	NA	NA	NA
WP_003817794.1\|3532681_3533344_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_010931399.1\|3533388_3534537_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_010931400.1\|3536860_3537811_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929965.1\|3540283_3541210_-	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_010929966.1\|3541228_3541684_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003815177.1\|3542535_3543327_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-20	27.4
WP_003815175.1\|3543358_3543979_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_063389780.1\|3543975_3544605_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_003815172.1\|3544617_3545226_-	HAD-IIIA family hydrolase	E3T535	Cafeteria_roenbergensis_virus	5.2e-10	26.1
WP_003815171.1\|3545222_3546212_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	37.7
WP_010929968.1\|3546317_3547532_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_005012067.1\|3549483_3550434_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929970.1\|3551867_3553154_+	putative Na+/H+ antiporter	NA	NA	NA	NA
WP_010929971.1\|3553319_3553628_+	FmdB family transcriptional regulator	NA	NA	NA	NA
WP_003807035.1\|3553628_3554294_+	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	6.7e-11	28.4
WP_003807038.1\|3554334_3556125_+\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
WP_010929972.1\|3556237_3557098_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_010929973.1\|3557094_3558300_+	cardiolipin synthase ClsB	NA	NA	NA	NA
WP_010929974.1\|3558296_3559181_-	DMT family transporter	NA	NA	NA	NA
WP_033446233.1\|3560697_3561132_-	carbon monoxide dehydrogenase	NA	NA	NA	NA
WP_014905478.1\|3561094_3562093_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931408.1\|3562204_3563350_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931407.1\|3563424_3564753_+	amidase	NA	NA	NA	NA
WP_003815296.1\|3564786_3565377_-	cysteine dioxygenase	NA	NA	NA	NA
WP_010931406.1\|3565666_3566461_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_019249391.1\|3567630_3568365_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010931404.1\|3568371_3569238_-	copper resistance protein B	NA	NA	NA	NA
WP_029443756.1\|3571068_3571566_-	cupredoxin family protein	NA	NA	NA	NA
WP_005013747.1\|3571862_3572813_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003815183.1\|3574000_3574873_+	RNase adapter RapZ	A0A1P8D5W0	Corynebacterium_phage	2.4e-08	34.5
WP_010929963.1\|3574869_3575820_+	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	6.9e-17	47.2
WP_005012067.1\|3575918_3576869_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_020699695.1\|3576973_3577204_-	hypothetical protein	NA	NA	NA	NA
WP_019247263.1\|3577330_3577720_-	SRPBCC family protein	NA	NA	NA	NA
WP_010929962.1\|3577736_3580118_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_023853194.1\|3580110_3581487_-	FAD binding domain-containing protein	A0A0P0IVM8	Acinetobacter_phage	2.4e-18	37.3
WP_010929960.1\|3581502_3582498_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003819054.1\|3582516_3583509_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003807624.1\|3583749_3584310_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_010929959.1\|3584314_3584641_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_010929958.1\|3584677_3585490_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_003807618.1\|3585500_3586583_-	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	3.3e-07	40.7
WP_010929957.1\|3586669_3587944_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA

DBSCAN-SWA_27

4033236 : 4086668

Planktothrix_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014486111.1\|4033236_4034187_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931662.1\|4034356_4035583_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA
WP_010931663.1\|4035782_4036649_+	ATP-binding protein	NA	NA	NA	NA
WP_003815027.1\|4036641_4037604_+	Nudix family hydrolase	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	1.9e-06	53.4
WP_010927663.1\|4037704_4038655_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010929577.1\|4038753_4039704_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023994937.1\|4039700_4041194_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_003815032.1\|4041190_4044298_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_010931665.1\|4044294_4047363_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_010931666.1\|4047359_4048610_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003815038.1\|4048790_4049552_-	cell division protein ZapD	NA	NA	NA	NA
WP_019247320.1\|4049584_4050235_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_003820519.1\|4050237_4051077_-	prepilin peptidase	NA	NA	NA	NA
WP_003815047.1\|4051317_4052061_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA
WP_003815049.1\|4052143_4052491_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003815051.1\|4052588_4053431_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_003815053.1\|4053475_4054363_-	segregation/condensation protein A	NA	NA	NA	NA
WP_003815055.1\|4054389_4054578_-	DUF3460 family protein	NA	NA	NA	NA
WP_010931669.1\|4054675_4056133_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_010931670.1\|4056119_4057646_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_003815061.1\|4057664_4058132_-	CopD family protein	NA	NA	NA	NA
WP_010931671.1\|4058131_4059154_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_169507388.1\|4059274_4059994_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-34	39.9
WP_003815066.1\|4060069_4061170_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003815068.1\|4061171_4062362_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003815070.1\|4062481_4063498_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.0e-71	42.1
WP_003815073.1\|4063816_4064488_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.5e-29	38.2
WP_010927126.1\|4064484_4065393_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_010931672.1\|4065604_4066252_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
WP_010931673.1\|4070103_4071180_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_003815084.1\|4071190_4072000_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003815086.1\|4072089_4072863_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_010929591.1\|4073045_4073996_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929577.1\|4074094_4075045_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_077274100.1\|4074933_4075956_+	CoA transferase	NA	NA	NA	NA
WP_010931674.1\|4075945_4077100_+	CoA transferase	NA	NA	NA	NA
WP_010931675.1\|4077139_4078552_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_019247370.1\|4078676_4079543_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931677.1\|4079544_4080369_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_023853488.1\|4080365_4081127_+	nitroreductase	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	2.0e-19	31.0
WP_003808010.1\|4081207_4081894_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_010931679.1\|4082067_4083075_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
WP_003819309.1\|4083071_4083851_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010931680.1\|4083908_4085171_+	CoA transferase	NA	NA	NA	NA
WP_010929591.1\|4085717_4086668_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011255

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection