CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP015438	Anoxybacillus amylolyticus strain DSM 15939 chromosome, complete genome	1 crisprs	c2c9_V-U4,Cas14u_CAS-V,cas14j,RT,DEDDh,csa3,cas14k,DinG,PrimPol,cas3	2	9
NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	0 crisprs	c2c9_V-U4,RT,cas14k	0	2
NZ_CP015440	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015438_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015438_1

714007-715568

Orphan

Consensus_repeat	Method
GTTTGTATCGTACCTATGAGGAATTGAAAC	PILER-CR
GTTTGTATCGTACCTATGAGGAATTGAAAC	CRISPRCasFinder
GTTTGTATCGTACCTATGAGGAATTGAAAC	CRT

23 spacers

csa3

The CRISPR arrays of NZ_CP015438_1

>merge|NZ_CP015438|1|714007-715568|PILER-CR,CRISPRCasFinder,CRT
GTTTGTATCGTACCTATGAGGAATTGAAACCATTTGTATCAAAATCGTTTACTTTGTACTGAATGGCGTTTGTATCGTACCTATGAGGAATTGAAACAGCCACATATAATCATTTACAAGATGCTCTTTTGCGGTTTGTATCGTACCTATGAGGAATTGAAACCCATATCTCATGCCTACAACTTTCACTTTTTCCATATGTTTGTATCGTACCTATGAGGAATTGAAACTCCGCTTCTAATATTCTCACTCCTAATATGCATTCGTTTGTATCGTACCTATGAGGAATTGAAACAAATCAAGCACACTGTGATAGATGATTTCAGACGAATGTTTGTATCGTACCTATGAGGAATTGAAACTCTATTTCATAAATAGTTGAAATATTTTCTTTTACAAGTTTGTATCGTACCTATGAGGAATTGAAACGGCTTGGAATACGGTCCTAAAATTATGTCCCATGCGTTTGTATCGTACCTATGAGGAATTGAAACCGTGATACGTGTTGCCGTCATCTTGTCGTACCCAAGTTTGTATCGTACCTATGAGGAATTGAAACCTATAAAGGGGTTGTTTGACGCATGGAGGGAATGAGTTTGTATCGTACCTATGAGGAATTGAAACTCCTTTGATTGCGGAGATGGTTTTGGTTGAGGTTTTGTTTGTATCGTACCTATGAGGAATTGAAACATTCGGCGCGGATTTCTTCCATAGAAGCCTCTAGTTTGGTTTGTATCGTACCTATGAGGAATTGAAACCGGAAAAACGGTAAGAGGGTTCGCGGTAGATTGGTATGGGTTTGTATCGTACCTATGAGGAATTGAAACATTTTCTTAGAGAAGCTCCTTTTCGAGCTCTTCTTTTGTTTGTATCGTACCTATGAGGAATTGAAACTGAGGGCAAGAAAACGGACAAGCTAATTGGTCAAAAATGTTTGTATCGTACCTATGAGGAATTGAAACATTCCATTGTTGCCACCCCACCATTTTTCCTTTTTTTAGTTTGTATCGTACCTATGAGGAATTGAAACTTGGAGTATTACTTTGTCATATTGTTTTGCCTCATTGTTTGTATCGTACCTATGAGGAATTGAAACTCGTCATAATTCGACGAACGCAAGACTAGTAAAAGTTTGTATCGTACCTATGAGGAATTGAAACGCGGAATGGATTAGCACACAAGAAAAAATCTACGCCGTTTGTATCGTACCTATGAGGAATTGAAACAATGTCAAGCGCTTGGATGTATTGATACGTAAGCGGTTTGTATCGTACCTATGAGGAATTGAAACACGGATTTTCAGTCAACGGTGAAACCGGACGTTCAAGTTTGTATCGTACCTATGAGGAATTGAAACAGCATTTTTCTAATATATCTTTTGTCTCATTATTACGTTTGTATCGTACCTATGAGGAATTGAAACGCTATTTCTACGGCCTTCTTATACGTAATGAACCTCATGCCTGTTTGTATCGTACCTATGAGGAATTGAAACATAAATTCTGCACCGATAGAAGCAAAAGGTTGTCTGTGTTTGTATCGTACCTATGAGAAACTGAAAC

>NZ_CP015438|1|1|714007-715501|PILER-CR
GTTTGTATCGTACCTATGAGGAATTGAAAC	CATTTGTATCAAAATCGTTTACTTTGTACTGAATGGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AGCCACATATAATCATTTACAAGATGCTCTTTTGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCATATCTCATGCCTACAACTTTCACTTTTTCCATAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCGCTTCTAATATTCTCACTCCTAATATGCATTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAATCAAGCACACTGTGATAGATGATTTCAGACGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTATTTCATAAATAGTTGAAATATTTTCTTTTACAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GGCTTGGAATACGGTCCTAAAATTATGTCCCATGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGTGATACGTGTTGCCGTCATCTTGTCGTACCCAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CTATAAAGGGGTTGTTTGACGCATGGAGGGAATGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCTTTGATTGCGGAGATGGTTTTGGTTGAGGTTTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTCGGCGCGGATTTCTTCCATAGAAGCCTCTAGTTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGAAAAACGGTAAGAGGGTTCGCGGTAGATTGGTATGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTTTCTTAGAGAAGCTCCTTTTCGAGCTCTTCTTTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGAGGGCAAGAAAACGGACAAGCTAATTGGTCAAAAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTCCATTGTTGCCACCCCACCATTTTTCCTTTTTTTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGGAGTATTACTTTGTCATATTGTTTTGCCTCATT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCGTCATAATTCGACGAACGCAAGACTAGTAAAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCGGAATGGATTAGCACACAAGAAAAAATCTACGCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AATGTCAAGCGCTTGGATGTATTGATACGTAAGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ACGGATTTTCAGTCAACGGTGAAACCGGACGTTCAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AGCATTTTTCTAATATATCTTTTGTCTCATTATTAC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCTATTTCTACGGCCTTCTTATACGTAATGAACCTCATGCCT
GTTTGTATCGTACCTATGAGGAATTGAAAC

>NZ_CP015438|1|1|714007-715568|CRISPRCasFinder
GTTTGTATCGTACCTATGAGGAATTGAAAC	CATTTGTATCAAAATCGTTTACTTTGTACTGAATGGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AGCCACATATAATCATTTACAAGATGCTCTTTTGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCATATCTCATGCCTACAACTTTCACTTTTTCCATAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCGCTTCTAATATTCTCACTCCTAATATGCATTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAATCAAGCACACTGTGATAGATGATTTCAGACGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTATTTCATAAATAGTTGAAATATTTTCTTTTACAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GGCTTGGAATACGGTCCTAAAATTATGTCCCATGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGTGATACGTGTTGCCGTCATCTTGTCGTACCCAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CTATAAAGGGGTTGTTTGACGCATGGAGGGAATGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCTTTGATTGCGGAGATGGTTTTGGTTGAGGTTTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTCGGCGCGGATTTCTTCCATAGAAGCCTCTAGTTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGAAAAACGGTAAGAGGGTTCGCGGTAGATTGGTATGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTTTCTTAGAGAAGCTCCTTTTCGAGCTCTTCTTTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGAGGGCAAGAAAACGGACAAGCTAATTGGTCAAAAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTCCATTGTTGCCACCCCACCATTTTTCCTTTTTTTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGGAGTATTACTTTGTCATATTGTTTTGCCTCATT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCGTCATAATTCGACGAACGCAAGACTAGTAAAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCGGAATGGATTAGCACACAAGAAAAAATCTACGCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AATGTCAAGCGCTTGGATGTATTGATACGTAAGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ACGGATTTTCAGTCAACGGTGAAACCGGACGTTCAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AGCATTTTTCTAATATATCTTTTGTCTCATTATTAC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCTATTTCTACGGCCTTCTTATACGTAATGAACCTCATGCCT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATAAATTCTGCACCGATAGAAGCAAAAGGTTGTCTGT
GTTTGTATCGTACCTATGAGAAACTGAAAC

>NZ_CP015438|1|1|714007-715568|CRT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CATTTGTATCAAAATCGTTTACTTTGTACTGAATGGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AGCCACATATAATCATTTACAAGATGCTCTTTTGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCATATCTCATGCCTACAACTTTCACTTTTTCCATAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCGCTTCTAATATTCTCACTCCTAATATGCATTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAATCAAGCACACTGTGATAGATGATTTCAGACGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTATTTCATAAATAGTTGAAATATTTTCTTTTACAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GGCTTGGAATACGGTCCTAAAATTATGTCCCATGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGTGATACGTGTTGCCGTCATCTTGTCGTACCCAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CTATAAAGGGGTTGTTTGACGCATGGAGGGAATGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCTTTGATTGCGGAGATGGTTTTGGTTGAGGTTTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTCGGCGCGGATTTCTTCCATAGAAGCCTCTAGTTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGAAAAACGGTAAGAGGGTTCGCGGTAGATTGGTATGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTTTCTTAGAGAAGCTCCTTTTCGAGCTCTTCTTTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGAGGGCAAGAAAACGGACAAGCTAATTGGTCAAAAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTCCATTGTTGCCACCCCACCATTTTTCCTTTTTTTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGGAGTATTACTTTGTCATATTGTTTTGCCTCATT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCGTCATAATTCGACGAACGCAAGACTAGTAAAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCGGAATGGATTAGCACACAAGAAAAAATCTACGCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AATGTCAAGCGCTTGGATGTATTGATACGTAAGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ACGGATTTTCAGTCAACGGTGAAACCGGACGTTCAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AGCATTTTTCTAATATATCTTTTGTCTCATTATTAC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCTATTTCTACGGCCTTCTTATACGTAATGAACCTCATGCCT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATAAATTCTGCACCGATAGAAGCAAAAGGTTGTCTGT
GTTTGTATCGTACCTATGAGAAACTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015438.1\|WP_066322950.1\|712409_713759_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143454
NZ_CP015438.1\|WP_066322948.1\|711242_711545_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP015438.1\|WP_066322947.1\|709908_711141_+\|TIGR02679-family-protein	unknown	unknown	gnl\|CDD\|274255
NZ_CP015438.1\|WP_066327097.1\|723056_723587_+\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|376684
NZ_CP015438.1\|WP_066322957.1\|722206_722869_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP015438.1\|WP_066322949.1\|711617_712397_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP015438.1\|WP_066322956.1\|720173_720713_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015438.1\|WP_066327094.1\|720843_722172_-\|GHKL-domain-containing-protein	unknown	unknown	gnl\|CDD\|380161
NZ_CP015438.1\|WP_148660354.1\|705944_707495_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP015438.1\|WP_066322941.1\|704678_705104_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP015438.1\|WP_066322940.1\|704253_704679_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP015438.1\|WP_066322954.1\|718402_719476_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270381
NZ_CP015438.1\|WP_066322953.1\|717608_718406_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP015438.1\|WP_066322945.1\|708054_708600_-\|DUF2730-family-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP015438.1\|WP_066322951.1\|715760_716822_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP015438.1\|WP_066322955.1\|719528_720173_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_CP015438.1\|WP_066322958.1\|723605_725102_+\|flotillin-family-protein	unknown	unknown	gnl\|CDD\|225177
NZ_CP015438.1\|WP_066322942.1\|705474_705831_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP015438.1\|WP_066322944.1\|707532_707841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015438.1\|WP_066322952.1\|716811_717603_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097

Protein	Function_ID	Function_description	E-value
NZ_CP015438.1\|WP_066322950.1\|712409_713759_+\|aldehyde-dehydrogenase	gnl\|CDD\|143454	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.	0
NZ_CP015438.1\|WP_066322948.1\|711242_711545_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	8.81588e-16
NZ_CP015438.1\|WP_066322947.1\|709908_711141_+\|TIGR02679-family-protein	gnl\|CDD\|274255	TIGR02679, conserved_hypothetical_protein, TIGR02679 family protein. Members of this protein belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria). [Hypothetical proteins, Conserved].	2.7162e-94
NZ_CP015438.1\|WP_066327097.1\|723056_723587_+\|NfeD-family-protein	gnl\|CDD\|376684	pfam01957, NfeD, NfeD-like C-terminal, partner-binding. NfeD-like proteins are widely distributed throughout prokaryotes and are frequently associated with genes encoding stomatin-like proteins (slipins). There appear to be three major groups: an ancestral group with only an N-terminal serine protease domain and this C-terminal beta sheet-rich domain which is structurally very similar to the OB-fold domain, associated with its neighboring slipin cluster; a second major group with an additional middle, membrane-spanning domain, associated in some species with eoslipin and in others with yqfA; a final 'artificial' group which unites truncated forms lacking the protease region and associated with their ancestral gene partner, either yqfA or eoslipin. This NefD, C-terminal, domain appears to be the major one for relating to the associated protein. NfeD homologs are clearly reliant on their conserved gene neighbor which is assumed to be necessary for function, either through direct physical interaction or by functioning in the same pathway, possibly involve with lipid-rafts.	0.00856631
NZ_CP015438.1\|WP_066322957.1\|722206_722869_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.5333e-79
NZ_CP015438.1\|WP_066322949.1\|711617_712397_+\|SDR-family-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	1.22504e-107
NZ_CP015438.1\|WP_066327094.1\|720843_722172_-\|GHKL-domain-containing-protein	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	8.71635e-69
NZ_CP015438.1\|WP_148660354.1\|705944_707495_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	2.41451e-129
NZ_CP015438.1\|WP_066322941.1\|704678_705104_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	4.89483e-19
NZ_CP015438.1\|WP_066322940.1\|704253_704679_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.09212e-13
NZ_CP015438.1\|WP_066322954.1\|718402_719476_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270381	cd13663, PBP2_PotD_PotF_like_2, The periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold. This group represents the periplasmic substrate-binding domain that serves as a primary polyamine receptor of an uncharacterized ABC-type transport system from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, as well as plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	5.49026e-148
NZ_CP015438.1\|WP_066322953.1\|717608_718406_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.9189e-77
NZ_CP015438.1\|WP_066322945.1\|708054_708600_-\|DUF2730-family-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	5.44065e-07
NZ_CP015438.1\|WP_066322951.1\|715760_716822_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.35448e-164
NZ_CP015438.1\|WP_066322955.1\|719528_720173_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	1.04633e-25
NZ_CP015438.1\|WP_066322958.1\|723605_725102_+\|flotillin-family-protein	gnl\|CDD\|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	3.6189e-108
NZ_CP015438.1\|WP_066322942.1\|705474_705831_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	6.58354e-56
NZ_CP015438.1\|WP_066322952.1\|716811_717603_+\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	2.49775e-79

>NZ_CP015438.1|WP_066322950.1|712409_713759_+|aldehyde-dehydrogenase
MNELLEKQKRYFQTGETLSLEFRLKQLIRLKETIQKYEQRITDTLKKELHKSPFEAYTTEIGIVYEEINFIMKRLARWMQPKRVPTPLTHFGSTSYVYPEPYGVSLIIAPWNYPFQLAVSPLIGAIAAGNGAVVKPSEYTPAMSALLKTIVSEAFSEEYVTVVEGGVDVSQELLGLRFDHIFFTGSVSVGKIVMAAAAKHLTPVTLELGGKSPAIVDQSAHLELAAKRIVWGKFLNAGQTCIAPDYVLVHKAVKQPLMEKMKRYLDELYGDRDAYGRIVSERHAERLVRFLENGTIIHGGSHDIQQRWIEPTLLDDVTWNDDVMQEEIFGPLLPILTFATIEEAIRTVQDHEKPLALYLFAEDERVQQQVLAQVSFGGGCINDTIMHIANPHLPFGGVGQSGIGAYHGKASFDAFSHYKSVLKQTTKFDIPLRYPNFPNALKWVRKLMG
>NZ_CP015438.1|WP_066322949.1|711617_712397_+|SDR-family-oxidoreductase
MKKNVLITGASSGIGYEFAARFAKEGYNIIAVARNKQKLDELKRQLEKTYGITVWIYAKDLSNQNEVHDLYETLKNEQLDVHILVNNAGFGLYGEFVETELQEELNMIDLNIKTLTHLTKCVVLDMVKRNEGKILNVASTAAFQPGPFMAVYYATKAYVLSFSEALSNELRHTNVTVSALCPGPTATGFADRANLQQSKLFKSGVMDVKQVVEAGYRGVMNNKTVIIPGLANKLLAFSVRFMPRKFVTNIVRKVQDRVR
>NZ_CP015438.1|WP_066322948.1|711242_711545_+|winged-helix-turn-helix-transcriptional-regulator
MGQKAIEVFRSCIPLFQALSDPHRQDIVLLLAEHDKLTVNEITERSSLSRPAISHHLKILRDQGLVSVEQKGTLRYYVLSIEKAVELLKDLIHAVENECL
>NZ_CP015438.1|WP_066322947.1|709908_711141_+|TIGR02679-family-protein
MNRLDEAVQFFRGERPFHRLFCEMKKKYESLGRIGGTISVSYFSAEETEAIASFFGKEMNRVSLAAFEQQLANTRFGDVSLIELLEHYFGEPLVTKKEQQQEIEREKEAYFARLMNTYRAQRDWLMAVEKQRFVQLAYQQNRQALESAISSVCRALEQLPSAYVRLPVFAQQMANDPHAFDLHTLAGKLLLSALQFYAEKEYDLSSVEEVNELLQSYHLLREDVLNFVTCAGVMAETEKGRHLVFAAACETNTALNVPLREVMPLARAYPSIGNSVFVVENAGVFSTLLDTNVPLISTNGQLNLATMWLLDLLVKEGKTLYYSGDFDPEGLKMAQRLVDRYGSSVRLWHYHRSDYLATKPTVSLSDERLAKLQSVTLRDLQPLKQEMLRLKKAGYQEALVEALRMEVEGG
>NZ_CP015438.1|WP_066322945.1|708054_708600_-|DUF2730-family-protein
MVEQLLYEILHEVKATREKVESLEKRVEAVEQKVETLEKEVSSLRQQVQALDGKVQALDGKVQALDGKVQALDRKVQALDEKVQTLDEKVQALDEKVQLLDERTLETKAICEAVRHGQEVLAAKYDALALDVHKMQGNITHLTNILEEKVLPALTDHESSIQVLNNRVFKVESTLQKLVHL
>NZ_CP015438.1|WP_066322944.1|707532_707841_+|hypothetical-protein
MTFTKKMIKECHQVLKDNGILFLSDLSVHDAEFGIGVEIEKNMFERPHRPYRPVYFLSKDHLDEFDVFDIEEVKPFSYLESHPGESTEHEHHLLIIVGRKTI
>NZ_CP015438.1|WP_148660354.1|705944_707495_+|IS66-family-transposase
MLEKQNAELQAKLKKQQELEAKVKWYEEQLRLLQHKRFGVSSEKIHPGQLELFNEVENESNLELPEPTLESIRYQRRRKTRGHREAMLENLPVETVEYRLSDEEQVCSCCGGTLHEMSTEVRQELVYIPAELKVVKHVQYVYSCRHCEHHEIETPIQTAPRPKSVIPGSLASPSILAHIMTQKYVEGLPLYRQEKQFQRMGMPLSRQTFANWMVKGAERWLSVLYHRMHEHLLELDIIHADETTLQVLQEPGRPATSTSYLWQYQTGIEGPPIILYDYQETRAGENPKNFLNGFQGYLQVDGYAGYHQVPNVTLVGCWAHARRGFTDALKSMPANSVAPVTATEGLNFCNQLFAVERKLKKLDPKDRYEERLKQSKPILDAFLSWLQKQKQHVLPKSALGKAVAYCLNQWDKLVAFLEDGRLEIDNNRSERSIKSVVIGRKNWLFANTPQGARASAIIYSIVETAKANQLHPYYYLRYLFEKLPNMDLSDKNALDQMLPWSTTLPVSCIAFQQLTK
>NZ_CP015438.1|WP_066322942.1|705474_705831_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLNAATVTHVYLARGSTDLRKSIDGLAAIVQEAFQLDPFSSTLFVFCNRGRDKLKILHWDHNGFWLYYRRLERGTFDWPSEHSSEPLQISPRQLRWLLDGLSLNQKQAHSAVTAKKVI
>NZ_CP015438.1|WP_066322941.1|704678_705104_+|class-I-SAM-dependent-methyltransferase
MDLKNYWDLQPDESKKWQENRYKRFGFVWGDEPGPTAKMAARLFAEKGCKNILVAGCGYGRECVYFHEKGFKVTGIDLSEEGIKLAKHWSQEKKLDIDFYVDSVLDMKHPNDGYDAVFSHKVFHQFRYEDRKKSKRQTLPT
>NZ_CP015438.1|WP_066322940.1|704253_704679_+|GNAT-family-N-acetyltransferase
MKLEYLINYIVRIANLEYERSGLITSAMVLTEEDIRRELHKWIVYFGGSEAVGCVRLSLNECDFSVAYLSVLPEFRRQGIGTKLYQIAEQKAIEQGGCVGWVMLRKDLEVNQKFFEKMGYKFHSVADPQGIYLYYKKAVKT
>NZ_CP015438.1|WP_066322951.1|715760_716822_+|ABC-transporter-ATP-binding-protein
MKQDAIIRFEGVTKQYDGLVVLDDVSFEMEKGKFYTLLGPSGCGKTTILRLIAGFTEPTEGTIYFHGQPVNHVPANKRQVNTVFQDYALFPHLDVFENVAFGLRVKKMKETDIREKVAEALQFVNLKGYENRRIQEMSGGQRQRVAIARAIVNEPEVLLLDEPLSALDLKLRTEMQYELRELQRRLGITFIFVTHDQEEALAMSDQIFILHKGKIQQSGTPKDIYDEPVNRFVADFIGESNILPGRMVQDFLVEFAGKRFECVDGGFQPNEQVDVVIRPEDLEITAPERGKLRVQVDSQLFRGVHYEICGYDENGNEWLVHSTKKAEVGEEIGLYFEAEAIHVMRVKDDGDEK
>NZ_CP015438.1|WP_066322952.1|716811_717603_+|ABC-transporter-permease
MKSSVRNVYLFPYILWIALCVVAPIALIVYDSFFDIEGHWTLENYEKFFTPIYLKMALSSFWYAFLITIFSLIIAYPTAYLLTKTKHKQLWLLMIILPTWVNLLLKVYAFLGIFGMFGLANAILETVGIGTKQILFTDFSFVFVSVYIFIPFMVLPIFNALEEMNPSLVDAARDLGASGWTTFRRVVFPLTLDGVKAGCQAVFIPALSLFMITRLIAGNRVITLGTAIEEHFLVTQDWGMGATIAVFLIMIMALVVIVTGNRR
>NZ_CP015438.1|WP_066322953.1|717608_718406_+|ABC-transporter-permease
MRRMKWGNVYLIFVFIILYTPIFYLLFYSFNSGGTMHHFKGFTLEWYREVFHDTRLLLIVLNTLIVALFSSLISTVFGVIGALAIYYVKSWRVKQALLTLNNVLIVSPDVIIGASFLILFTLAGIQLGFVSVLLSHIAFSVPIVVLMVLPKLQEMSPTWVDAARDLGANEWHILTRVVLPFITPGIFAGFFMALTYSLDDFAVTFFVTGNGFSTLSVEIYSRARQGISLSINALSTLLFLLTVVLVAGYYWISRKGSRLYGMWKK
>NZ_CP015438.1|WP_066322954.1|718402_719476_+|ABC-transporter-substrate-binding-protein
MRKLVQSFIAVLVVAFLLLYVSNRLNEAEGDAGDHTLVVYNWGDYIDPKLITMFEKQTGLKVIYQTFDSNEAMMAKIAQGGTTFDVAVPSEYAISKMKEEGLLLPLDHAKLPNLKYIDPRFLNLSFDPDNRYSVPYFWGTVGIVYNRDMLGGKKITSWNDLWDKTLRNQILLVDGAREVMGMALNSLHYSLNDTNKAHLEEAKRKLDALTPNVKAIVGDEIKMLIANEEAAVGVVWSGDAAEMIAENDKLDYVVPKEGSNLWFDNMVIPKTAKNIEGAHQFINFMLDPKHAAQNAEYVGYATPNAKAMKYLPKEMIEDKRFYPDFNKIGHLEVYKNLGKRMLAYYNELFLQFKMHRK
>NZ_CP015438.1|WP_066322955.1|719528_720173_-|PspA/IM30-family-protein
MGLFKRVKTIVLADLNDLIDKCEDPISMTKQYLRELEEQMEKAQQALAEQFIVENRYERLIQHAQEMIEKRARQAKLAVEKNEEAIAKMALQEKLMYEKKLDAYKQQYNTLTEKTTYLKEKIKKLKETYEELKVKQLDLIARANMAKAIQAIHQTLVSFHPEHALKGFARMEERVFALEAEAKASNYVYESQRAVTPSVFDEEVEKELAKLKAE
>NZ_CP015438.1|WP_066322956.1|720173_720713_-|hypothetical-protein
MKKRKFLLWLLLAAVVFGGLALFMNIGFGERMHGIMLDGPRHFQAFNGQPGMFHRGEFGEHRHIAFHHGIHGGMMAGGWMIFGMFALLFQLAMVVIGWIMWKTAKRSGWKWAGMALMMASILALLPKVLLIPFVLVVAYMFYKKQQTKMREPFEPMTVPITPIHDFLDEWERNIQKEGK
>NZ_CP015438.1|WP_066327094.1|720843_722172_-|GHKL-domain-containing-protein
MFRRTQFRLTLLYSGMLMVFLTLFIVIVYSILYVMITHDQERRVNTLADQERKAIEDILAKQTILDFLDEQNVVFLSEDQFFFYVVSPRGQLMMGDEVNKAVRPALLAALQQWEPDEKGLKYIDVQLSAHQHEFSRFRSLDLKLLTAARPIVVHDQLVGILYVGMDATTFSRLFHWLWIIFIGLAVLFIGVAILLSHFMSKRALVPIQEAYNRQREFVANASHELRTPLSVIFSSVEALEMDGDLKKNEFSQKVMHRLREEVKRMTKLINDLLTLARSDSEHAFLEIVKEPFDFRPHAERTIQMLKELADKKDIHLHFDSPECVLGTGDADKLTQLLYILLDNAIKYTPNGGHVSLSLRVEPSKQHQLLIISVKDTGIGIAKEDIGRIFDRFYRADKARTRQHGGHGLGLSIAKWIVDAHRGTIDVQSEVGKGTEFIVKIPF
>NZ_CP015438.1|WP_066322957.1|722206_722869_-|response-regulator-transcription-factor
MKLLLAEDDLYLGELIVHMLKKKGADKVDWVQEGEDAYEYALASFYDVIILDWMLPNGDGVEICKRLRQKGYSGAILMLTAKDAVQDRVQGLEAGADDYLVKPFEIDELVARLKALSRRTFVPIQEEVVRFKDFVLNRTSHTLHRGEKEILLTPREFQLLDLLLQNKGHVLPRETLLDRIWGYDADVSMKTIDATVKLLRKKLEEDIIQTVRGVGYKIED
>NZ_CP015438.1|WP_066327097.1|723056_723587_+|NfeD-family-protein
MSGYPLETVYLFVLIISGSLTFLYILLSDILDGILDVPDHPLFSPQLILSFFTVFSAEGYLFEKYTGMPSTLIGLLSAGIALIAVLLLHFFVFIPLRSAEASLHYTEADLEGSLAKVIVPVPADGFGEILIERTSGAVAKPAQSLKNEEIATGTEVVIIKMENGVATVAKHDPYHI
>NZ_CP015438.1|WP_066322958.1|723605_725102_+|flotillin-family-protein
MVPMLIVVGVVVLLLLGLIAVFMLRYRTVGPDEALIVTGSYLGSKNVHVDESGNKIKIVRGGGTFVLPIFQQAEPLSLLSIKLDVQTPEVYTEQGVPVMADGVAIIKVGSSIGEIATAAEQFLGKTRQDMENEAKEVLEGHLRSILGSMTVEEIYKNRDKFSQEVQRVASHDLAKMGLVIVSFTIKDVRDKNGYLDALGKPRIAQVKRDADIATAEAEKETRIKRAEADKEARKAELERLTEIAEAEKINQLKLAEFRREQDIAKARADQAYHLEEAKAKQEVTEQQMQIKIIERQKQIELEEKEILRRERQYDSEVKKKADADRYAVEQAAVAAKVKQIAEADAQKYRIEAMAKAEAEKIRLDGLAKAEAEKAKGEAEAEVIRLKGLAEAEAKQKIAEAFERYGQAAVLDMILKMLPEYAKQIAAPLANIEKITVVDTGSNSANGGANRVAGYATNLMATLQESLKASSGIDVKQLLENLSGKGTIQSAPSQTVEKE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015438_1	1.3\|714170\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714170-714206	37	NZ_CP039725	Bacillus thuringiensis strain BT-59 plasmid p4, complete sequence	74612-74648	9	0.757
NZ_CP015438_1	1.3\|714170\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714170-714206	37	NZ_KY352353	Bacillus thuringiensis serovar israelensis strain 1.24 plasmid pT0124-4, complete sequence	54038-54074	9	0.757
NZ_CP015438_1	1.3\|714170\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714170-714206	37	LC128536	Bacillus thuringiensis serovar israelensis plasmid pBTI-6 DNA, complete sequence, strain: HD522	42357-42393	9	0.757
NZ_CP015438_1	1.3\|714170\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714170-714206	37	NC_010076	Bacillus thuringiensis serovar israelensis plasmid pBtoxis, complete sequence	54039-54075	9	0.757
NZ_CP015438_1	1.3\|714170\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714170-714206	37	NC_018510	Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence	130310-130346	9	0.757
NZ_CP015438_1	1.3\|714170\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714170-714206	37	NZ_CP053973	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed4, complete sequence	83875-83911	9	0.757
NZ_CP015438_1	1.3\|714170\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714170-714206	37	NZ_CP013279	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-4-128K, complete sequence	52970-53006	9	0.757
NZ_CP015438_1	1.3\|714170\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714170-714206	37	NZ_CP045026	Bacillus thuringiensis strain JW-1 plasmid p4, complete sequence	54037-54073	9	0.757
NZ_CP015438_1	1.6\|714369\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714369-714405	37	NZ_CP009060	Borreliella afzelii K78 plasmid cp26, complete sequence	23787-23823	9	0.757
NZ_CP015438_1	1.6\|714369\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714369-714405	37	NZ_CP009213	Borreliella afzelii Tom3107 plasmid cp26, complete sequence	23778-23814	9	0.757
NZ_CP015438_1	1.6\|714369\|37\|NZ_CP015438\|PILER-CR,CRISPRCasFinder,CRT	714369-714405	37	NC_017229	Borreliella afzelii PKo plasmid cp26, complete sequence	23755-23791	9	0.757

1. spacer 1.3|714170|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039725 (Bacillus thuringiensis strain BT-59 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.757

ccatatctcatgcctacaactttcactttttccatat	CRISPR spacer
ccttcttgaatgcctactactttccctttttccatcc	Protospacer
** * *.  ******** ****** ********** .

2. spacer 1.3|714170|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY352353 (Bacillus thuringiensis serovar israelensis strain 1.24 plasmid pT0124-4, complete sequence) position: , mismatch: 9, identity: 0.757

ccatatctcatgcctacaactttcactttttccatat	CRISPR spacer
ccttcttgaatgcctactactttccctttttccatcc	Protospacer
** * *.  ******** ****** ********** .

3. spacer 1.3|714170|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to LC128536 (Bacillus thuringiensis serovar israelensis plasmid pBTI-6 DNA, complete sequence, strain: HD522) position: , mismatch: 9, identity: 0.757

ccatatctcatgcctacaactttcactttttccatat	CRISPR spacer
ccttcttgaatgcctactactttccctttttccatcc	Protospacer
** * *.  ******** ****** ********** .

4. spacer 1.3|714170|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NC_010076 (Bacillus thuringiensis serovar israelensis plasmid pBtoxis, complete sequence) position: , mismatch: 9, identity: 0.757

ccatatctcatgcctacaactttcactttttccatat	CRISPR spacer
ccttcttgaatgcctactactttccctttttccatcc	Protospacer
** * *.  ******** ****** ********** .

5. spacer 1.3|714170|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NC_018510 (Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence) position: , mismatch: 9, identity: 0.757

ccatatctcatgcctacaactttcactttttccatat	CRISPR spacer
ccttcttgaatgcctactactttccctttttccatcc	Protospacer
** * *.  ******** ****** ********** .

6. spacer 1.3|714170|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053973 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.757

ccatatctcatgcctacaactttcactttttccatat	CRISPR spacer
ccttcttgaatgcctactactttccctttttccatcc	Protospacer
** * *.  ******** ****** ********** .

7. spacer 1.3|714170|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013279 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-4-128K, complete sequence) position: , mismatch: 9, identity: 0.757

ccatatctcatgcctacaactttcactttttccatat	CRISPR spacer
ccttcttgaatgcctactactttccctttttccatcc	Protospacer
** * *.  ******** ****** ********** .

8. spacer 1.3|714170|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045026 (Bacillus thuringiensis strain JW-1 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.757

ccatatctcatgcctacaactttcactttttccatat	CRISPR spacer
ccttcttgaatgcctactactttccctttttccatcc	Protospacer
** * *.  ******** ****** ********** .

9. spacer 1.6|714369|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009060 (Borreliella afzelii K78 plasmid cp26, complete sequence) position: , mismatch: 9, identity: 0.757

tctatttcataaatagttgaaatattttcttttacaa	CRISPR spacer
tatttattataaataggtgtaatattttcttttattt	Protospacer
* * * *.******** ** **************.

10. spacer 1.6|714369|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009213 (Borreliella afzelii Tom3107 plasmid cp26, complete sequence) position: , mismatch: 9, identity: 0.757

tctatttcataaatagttgaaatattttcttttacaa	CRISPR spacer
tatttattataaataggtgtaatattttcttttattt	Protospacer
* * * *.******** ** **************.

11. spacer 1.6|714369|37|NZ_CP015438|PILER-CR,CRISPRCasFinder,CRT matches to NC_017229 (Borreliella afzelii PKo plasmid cp26, complete sequence) position: , mismatch: 9, identity: 0.757

tctatttcataaatagttgaaatattttcttttacaa	CRISPR spacer
tatttattataaataggtgtaatattttcttttattt	Protospacer
* * * *.******** ** **************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

127979 : 252680

109

Bacillus_phage(11.36%)

transposase,tRNA,protease,integrase

attL 131634:131649|attR 195974:195989

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066322191.1\|127979_128540_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_066322193.1\|128720_129350_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_066322196.1\|129423_130374_-	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	9.2e-46	37.2
WP_066322199.1\|130386_131763_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	8.7e-29	35.1
131634:131649	attL	NA	NA	NA	NA
WP_066322204.1\|131890_132181_-	septation regulator SpoVG	NA	NA	NA	NA
WP_066322206.1\|132342_132717_-	RidA family protein	NA	NA	NA	NA
WP_066322207.1\|132733_133558_-	pur operon repressor	NA	NA	NA	NA
WP_066322208.1\|133616_134486_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_084256122.1\|134626_134809_-	small, acid-soluble spore protein, alpha/beta type	NA	NA	NA	NA
WP_066322212.1\|134895_135159_-	Veg family protein	NA	NA	NA	NA
WP_066322213.1\|135365_136244_-	sporulation peptidase YabG	NA	NA	NA	NA
WP_066322215.1\|136329_137217_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_084256124.1\|137209_137911_-	ribonuclease M5	NA	NA	NA	NA
WP_066322216.1\|137930_139091_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q331V1	Clostridium_botulinum_C_phage	8.8e-115	58.9
WP_066322217.1\|139087_139684_-\|transposase	IS607 family transposase	Q331V0	Clostridium_botulinum_C_phage	5.7e-78	69.0
WP_084256392.1\|139872_140991_-	G5 and 3D domain-containing protein	A0A217ER34	Bacillus_phage	7.8e-28	54.9
WP_066322221.1\|141248_142019_-	TatD family hydrolase	NA	NA	NA	NA
WP_084256126.1\|142155_144189_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.3e-102	39.3
WP_066322225.1\|144611_144896_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	3.0e-16	71.4
WP_066322228.1\|144930_145797_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	4.0e-64	47.6
WP_066322234.1\|145812_146559_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_066322237.1\|146863_147211_-	DNA replication initiation control protein YabA	NA	NA	NA	NA
WP_066322239.1\|147227_148055_-	stage 0 sporulation family protein	NA	NA	NA	NA
WP_066322242.1\|148047_149052_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.0e-27	36.5
WP_066322243.1\|149126_149765_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.0e-60	55.5
WP_066322245.1\|149788_151222_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_066322248.1\|151295_151487_-	sigma factor G inhibitor Gin	NA	NA	NA	NA
WP_179946280.1\|157539_159090_+\|transposase	IS1182 family transposase	Q9MBP7	Staphylococcus_prophage	1.4e-78	35.2
WP_066322250.1\|159289_159550_-	pro-sigmaK processing inhibitor BofA family protein	NA	NA	NA	NA
WP_066322252.1\|159628_159853_-	YaaL family protein	NA	NA	NA	NA
WP_066322253.1\|159875_160472_-	recombination protein RecR	NA	NA	NA	NA
WP_066322255.1\|160484_160817_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_066322257.1\|160833_162507_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	5.2e-52	36.4
WP_066322260.1\|162960_163428_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
WP_066322262.1\|163517_164804_+	glycoside hydrolase family 18 protein	NA	NA	NA	NA
WP_066322264.1\|164961_165609_+	deoxynucleoside kinase	A0A127AVX2	Bacillus_phage	4.5e-20	31.5
WP_066322266.1\|165595_166264_+	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	3.7e-25	35.9
WP_084256128.1\|166429_167551_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	6.0e-60	38.0
WP_066322271.1\|167964_169239_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.0e-95	52.3
WP_066322274.1\|169763_170342_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA
WP_066322275.1\|170357_171242_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA
WP_066322276.1\|171410_172742_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.2e-22	28.8
WP_066322277.1\|172841_174308_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.6e-103	42.7
WP_084256130.1\|174411_175413_+	YaaC family protein	NA	NA	NA	NA
WP_158512118.1\|181353_181500_-	hypothetical protein	NA	NA	NA	NA
WP_066322282.1\|181957_183241_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_084256132.1\|183212_184211_-	HD domain-containing protein	NA	NA	NA	NA
WP_066322284.1\|184351_186817_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	1.9e-119	38.1
WP_066326991.1\|186888_188811_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	1.1e-149	47.6
WP_066322286.1\|188846_189959_-	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_066322288.1\|189970_190189_-	S4 domain-containing protein YaaA	NA	NA	NA	NA
WP_066322291.1\|190299_191436_-	DNA polymerase III subunit beta	D0R7I4	Paenibacillus_phage	2.6e-10	28.4
WP_066322294.1\|191606_192953_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_003397591.1\|193467_193602_+	50S ribosomal protein L34	NA	NA	NA	NA
WP_066322298.1\|193692_194049_+	ribonuclease P protein component	NA	NA	NA	NA
WP_179946281.1\|194086_194860_+\|integrase	YidC family membrane integrase SpoIIIJ	NA	NA	NA	NA
WP_066322299.1\|194856_195492_+	protein jag	NA	NA	NA	NA
WP_066322301.1\|195679_197065_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
195974:195989	attR	NA	NA	NA	NA
WP_066322303.1\|197079_198969_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_066322306.1\|198988_199705_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_066322309.1\|199742_200591_+	nucleoid occlusion protein	S5VSZ7	Leptospira_phage	2.1e-17	38.0
WP_066322311.1\|200716_201478_+	ParA family protein	Q8JL10	Natrialba_phage	4.7e-24	29.3
WP_066322313.1\|201470_202325_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	3.3e-18	35.7
WP_066326993.1\|202372_203074_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_066322315.1\|203118_203739_-\|protease	spore protease YyaC	G3M9W0	Bacillus_virus	1.0e-21	38.5
WP_084256394.1\|204009_204807_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_066322324.1\|204819_205014_+	DUF951 domain-containing protein	NA	NA	NA	NA
WP_066322326.1\|205035_207045_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_066322331.1\|207115_208216_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_066322334.1\|208321_208609_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_066322337.1\|208634_209129_+	single-stranded DNA-binding protein	D7RWG9	Brochothrix_phage	2.0e-52	65.7
WP_027408127.1\|209190_209427_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_066322340.1\|209487_210417_+	YybS family protein	NA	NA	NA	NA
WP_066322342.1\|210449_212423_+	DHH family phosphoesterase	NA	NA	NA	NA
WP_066322345.1\|212419_212869_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_066322348.1\|212961_214326_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	6.2e-120	51.3
WP_066322349.1\|214467_215754_+	adenylosuccinate synthase	A0A2P1EKE7	Megavirus	4.6e-72	36.3
WP_066322351.1\|215950_216661_+	response regulator transcription factor	W8CYM9	Bacillus_phage	5.3e-46	42.7
WP_066322353.1\|216671_218504_+	cell wall metabolism sensor histidine kinase WalK	A0A1V0SGX0	Hokovirus	1.0e-24	26.2
WP_066322356.1\|218484_219831_+	transcriptional regulator	NA	NA	NA	NA
WP_066322360.1\|219817_220603_+	two-component system regulatory protein YycI	NA	NA	NA	NA
WP_066326999.1\|220611_221400_+	MBL fold metallo-hydrolase	A0A2H4J3R0	uncultured_Caudovirales_phage	2.3e-42	34.9
WP_066322363.1\|221508_222726_+\|protease	serine protease	W5SAB9	Pithovirus	5.6e-11	32.8
WP_084256134.1\|222830_222992_+	CxxH/CxxC protein	NA	NA	NA	NA
WP_066322366.1\|223067_223547_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_158512119.1\|223490_225203_-	recombinase family protein	A0A0S2SXR4	Bacillus_phage	2.5e-57	34.1
WP_066322370.1\|225444_225951_-	helix-turn-helix transcriptional regulator	A0A0A7AR52	Bacillus_phage	1.1e-08	47.6
WP_066366162.1\|226092_226278_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_148660346.1\|226799_227780_+	replication initiation factor domain-containing protein	NA	NA	NA	NA
WP_066322375.1\|228420_229650_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	9.4e-176	76.0
WP_066322377.1\|230184_232953_+	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	6.9e-118	32.4
WP_066322379.1\|232949_235034_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_066366158.1\|236465_236651_+	GrpB family protein	NA	NA	NA	NA
WP_066322380.1\|236789_237230_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_066322385.1\|237821_238169_+	hypothetical protein	NA	NA	NA	NA
WP_066322388.1\|238246_239737_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_148660347.1\|239816_241229_+	AIPR family protein	D0UIM0	Aggregatibacter_phage	2.5e-79	36.5
WP_066366153.1\|241399_242029_+	hypothetical protein	A0A1V0E6W3	Klebsiella_phage	4.0e-05	37.5
WP_066322398.1\|242290_243874_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.1e-75	37.1
WP_066372650.1\|243939_244296_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.6e-19	39.8
WP_066322404.1\|244289_244622_-	hypothetical protein	NA	NA	NA	NA
WP_158512120.1\|244840_245023_+	hypothetical protein	NA	NA	NA	NA
WP_066322407.1\|245066_245846_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.1e-63	48.8
WP_066322409.1\|245839_247066_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	1.2e-40	31.2
WP_066322411.1\|247181_247955_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.1e-60	48.3
WP_066322412.1\|248020_248338_-	AzlD domain-containing protein	NA	NA	NA	NA
WP_066322413.1\|248327_249050_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_066322416.1\|249046_250144_-	SagB family peptide dehydrogenase	NA	NA	NA	NA
WP_066322418.1\|251096_252680_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.4e-75	37.1

DBSCAN-SWA_2

442087 : 450537

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066327035.1\|442087_443308_+	ABC transporter ATP-binding protein	M1HV27	Acanthocystis_turfacea_Chlorella_virus	9.2e-06	25.2
WP_158512124.1\|443304_446205_+	glycosyltransferase	NA	NA	NA	NA
WP_066322709.1\|446264_447164_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	1.8e-107	67.4
WP_066322710.1\|447150_447702_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.2e-42	48.0
WP_066322711.1\|447717_448737_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.6e-86	51.4
WP_066322712.1\|448736_449585_+	dTDP-4-dehydrorhamnose reductase	A0A1D8EQE2	Escherichia_phage	5.4e-37	39.1
WP_066322713.1\|449667_450537_+	glycosyltransferase family 2 protein	A0A0F7L2F7	uncultured_marine_virus	6.5e-06	30.3

DBSCAN-SWA_3

672375 : 682178

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066322915.1\|672375_673668_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	4.5e-19	33.3
WP_066322916.1\|673740_674451_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	4.0e-46	42.6
WP_066327084.1\|674454_674709_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FKD5	Synechococcus_phage	1.1e-06	37.0
WP_066322917.1\|674705_675392_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_066322918.1\|675375_677601_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.1e-166	42.0
WP_066322919.1\|677576_678965_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	7.7e-49	31.7
WP_066322920.1\|679037_680075_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	6.3e-72	43.5
WP_066322921.1\|680071_680650_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-25	36.2
WP_066322922.1\|680642_682178_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	5.1e-78	53.6

DBSCAN-SWA_4

1829799 : 1919746

Staphylococcus_phage(13.33%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066322703.1\|1829799_1830981_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_066324677.1\|1831078_1832233_-	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_066324678.1\|1832232_1833753_-	spore germination protein	NA	NA	NA	NA
WP_066324679.1\|1833755_1834841_-	endospore germination permease	NA	NA	NA	NA
WP_066324680.1\|1835090_1835969_+	DMT family transporter	NA	NA	NA	NA
WP_148660375.1\|1835982_1836342_+	DMT family transporter	NA	NA	NA	NA
WP_066322703.1\|1836397_1837579_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_066324689.1\|1837643_1838270_+	DMT family transporter	NA	NA	NA	NA
WP_066324691.1\|1838277_1839540_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_066324692.1\|1839713_1840103_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_066324694.1\|1840095_1840995_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-23	33.8
WP_066324696.1\|1840969_1842943_+	hypothetical protein	NA	NA	NA	NA
WP_066324698.1\|1843462_1845565_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.9e-230	59.2
WP_066324699.1\|1845599_1845818_-	hypothetical protein	NA	NA	NA	NA
WP_066324706.1\|1845951_1847553_+	spore germination protein	NA	NA	NA	NA
WP_084256425.1\|1847578_1848745_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_066324712.1\|1848766_1849885_+	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA
WP_066324714.1\|1849991_1851434_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_066324717.1\|1851443_1851863_+	ATP-binding protein	NA	NA	NA	NA
WP_066324720.1\|1851867_1852251_+	STAS domain-containing protein	NA	NA	NA	NA
WP_066324722.1\|1852376_1853393_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	4.9e-37	30.7
WP_066324724.1\|1853505_1855233_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.9e-44	28.3
WP_066324726.1\|1855213_1856989_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-56	31.2
WP_066327297.1\|1857020_1857614_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_066324728.1\|1857779_1858337_+	thioredoxin family protein	NA	NA	NA	NA
WP_066324730.1\|1858655_1858856_+	cold-shock protein	Q9AZD3	Lactococcus_phage	4.5e-19	66.2
WP_066324731.1\|1859104_1859488_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_066324733.1\|1859744_1861097_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_066324736.1\|1861184_1862147_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_066324738.1\|1862235_1863024_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_066324740.1\|1863020_1863929_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.2e-38	39.1
WP_066324743.1\|1863921_1864902_+	ABC transporter permease	NA	NA	NA	NA
WP_066324746.1\|1864915_1865533_+	CoA pyrophosphatase	NA	NA	NA	NA
WP_066324747.1\|1865513_1866404_-	DMT family transporter	NA	NA	NA	NA
WP_066324749.1\|1866524_1867439_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_066324751.1\|1867500_1867908_+	SRPBCC domain-containing protein	NA	NA	NA	NA
WP_066324753.1\|1867914_1868253_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_066324755.1\|1868254_1868512_+	hypothetical protein	NA	NA	NA	NA
WP_066324756.1\|1868555_1869146_+	LysE family transporter	NA	NA	NA	NA
WP_066324759.1\|1869304_1870483_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_066324762.1\|1870514_1871279_+	beta-ketoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	9.5e-17	30.4
WP_066324764.1\|1871367_1871817_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA
WP_066324766.1\|1871813_1872257_+	MaoC family dehydratase	NA	NA	NA	NA
WP_066324768.1\|1872415_1872916_+	hypothetical protein	NA	NA	NA	NA
WP_066324770.1\|1873283_1876121_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_066324773.1\|1876150_1877383_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
WP_066324783.1\|1877951_1878179_-	hypothetical protein	NA	NA	NA	NA
WP_066327300.1\|1878297_1879185_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_084256271.1\|1879659_1880262_+	NYN domain-containing protein	NA	NA	NA	NA
WP_066324787.1\|1880932_1883803_+	DEAD/DEAH box helicase family protein	A0A2H4J643	uncultured_Caudovirales_phage	1.1e-214	43.5
WP_066324790.1\|1883787_1885428_+	site-specific DNA-methyltransferase	A0A0K1LNZ9	Escherichia_phage	5.2e-97	46.8
WP_066324793.1\|1885440_1888119_+	DEAD/DEAH box helicase family protein	R9VYH5	Serratia_phage	3.7e-07	23.7
WP_066324796.1\|1888845_1890504_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_066324798.1\|1892538_1892772_+	hypothetical protein	NA	NA	NA	NA
WP_066324800.1\|1893136_1894048_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_066324801.1\|1894322_1894838_+	hypothetical protein	NA	NA	NA	NA
WP_066324803.1\|1894942_1895389_+	hypothetical protein	NA	NA	NA	NA
WP_066324806.1\|1895684_1896593_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_066324808.1\|1897434_1897632_+	DUF2281 domain-containing protein	NA	NA	NA	NA
WP_066324810.1\|1897624_1897975_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_066324811.1\|1897983_1898496_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_066324813.1\|1898513_1899044_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_066324815.1\|1899361_1899658_-	hypothetical protein	NA	NA	NA	NA
WP_066324817.1\|1900007_1901486_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_066324821.1\|1901877_1902231_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_066324824.1\|1902227_1902836_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_066324826.1\|1902906_1903161_+	hypothetical protein	NA	NA	NA	NA
WP_066324829.1\|1903150_1903558_+\|protease	clan AA aspartic protease	A0A0A8WIU2	Clostridium_phage	8.3e-12	35.3
WP_066324832.1\|1903953_1904691_+	hypothetical protein	NA	NA	NA	NA
WP_066324834.1\|1904677_1905250_+	hypothetical protein	NA	NA	NA	NA
WP_066324838.1\|1905769_1906174_-	hypothetical protein	NA	NA	NA	NA
WP_066324840.1\|1906170_1907145_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	7.8e-16	28.4
WP_066324845.1\|1908040_1908439_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	2.6e-50	70.5
WP_066323120.1\|1908451_1909561_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	6.3e-86	49.5
WP_066324847.1\|1909722_1910859_+	conserved virulence factor C family protein	NA	NA	NA	NA
WP_066324849.1\|1910945_1911653_+	DsbA family oxidoreductase	NA	NA	NA	NA
WP_066327303.1\|1911700_1912273_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_066324852.1\|1912613_1912958_+	hypothetical protein	NA	NA	NA	NA
WP_066324856.1\|1913145_1913694_+	YpiB family protein	NA	NA	NA	NA
WP_066324858.1\|1913936_1916225_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_084256275.1\|1916376_1917471_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_066324862.1\|1917851_1918784_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_066324865.1\|1918780_1919746_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA

DBSCAN-SWA_5

2079339 : 2119606

Leptospira_phage(22.22%)

transposase,integrase

attL 2094498:2094513|attR 2108514:2108529

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066324512.1\|2079339_2080797_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_066325274.1\|2082124_2082889_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_066325278.1\|2083000_2084440_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_084256303.1\|2084619_2085534_-	EamA family transporter	NA	NA	NA	NA
WP_066325282.1\|2085618_2087085_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_066325283.1\|2087118_2088489_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	4.5e-09	30.3
WP_066325284.1\|2088625_2089444_-	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_066325287.1\|2089695_2090007_+	hypothetical protein	NA	NA	NA	NA
WP_066325289.1\|2090210_2090615_-	GtrA family protein	NA	NA	NA	NA
WP_066325297.1\|2090604_2091564_-	glycosyltransferase family 2 protein	U5P087	Shigella_phage	4.8e-58	43.5
WP_066325299.1\|2092461_2092704_-	DUF1450 domain-containing protein	NA	NA	NA	NA
WP_066327326.1\|2092882_2093611_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-36	43.4
WP_066325302.1\|2093633_2094485_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
2094498:2094513	attL	NA	NA	NA	NA
WP_066325305.1\|2094547_2095201_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_066325311.1\|2095215_2095866_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_148660384.1\|2096746_2097076_-	hypothetical protein	NA	NA	NA	NA
WP_148660385.1\|2097714_2098206_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_066327330.1\|2098466_2098862_-	ribonucleoside-triphosphate reductase	NA	NA	NA	NA
WP_066325318.1\|2098971_2099151_-	hypothetical protein	NA	NA	NA	NA
WP_148660354.1\|2099325_2100876_-\|transposase	IS66 family transposase	S5VLC8	Leptospira_phage	1.4e-46	35.6
WP_066322942.1\|2100989_2101346_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.0e-18	47.8
WP_066322969.1\|2101339_2101657_-	hypothetical protein	NA	NA	NA	NA
WP_066325320.1\|2102069_2103323_+	sensor histidine kinase	NA	NA	NA	NA
WP_066325322.1\|2103337_2104231_+	response regulator	NA	NA	NA	NA
WP_066325324.1\|2104312_2104936_-	LysE family translocator	NA	NA	NA	NA
WP_066325333.1\|2104953_2105745_-	tryptophan 2,3-dioxygenase	NA	NA	NA	NA
WP_066325341.1\|2105854_2106964_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.6e-86	49.5
WP_066325346.1\|2106976_2107375_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	5.2e-51	71.2
WP_066325348.1\|2107460_2108726_-	kynureninase	NA	NA	NA	NA
2108514:2108529	attR	NA	NA	NA	NA
WP_066325349.1\|2108839_2109433_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_158512135.1\|2109738_2110611_-	DnaD domain protein	NA	NA	NA	NA
WP_066325359.1\|2111288_2112230_+	hypothetical protein	A0A2I7SCF1	Paenibacillus_phage	8.5e-76	61.5
WP_066325361.1\|2112246_2112642_+	hypothetical protein	NA	NA	NA	NA
WP_066325363.1\|2113257_2114607_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_066325365.1\|2114630_2116097_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_066325367.1\|2116221_2117793_-	PucR family transcriptional regulator	NA	NA	NA	NA
WP_066325369.1\|2118018_2118252_-	hypothetical protein	NA	NA	NA	NA
WP_084256305.1\|2118484_2119606_-\|transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	6.6e-59	37.7

DBSCAN-SWA_6

2144283 : 2218013

Bacillus_phage(23.53%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066322967.1\|2144283_2145456_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_066325428.1\|2145542_2146211_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_066325434.1\|2146222_2147020_-	ABC transporter permease	NA	NA	NA	NA
WP_066325437.1\|2147032_2147905_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-23	33.5
WP_066325439.1\|2148018_2149734_-	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA
WP_066325440.1\|2149746_2151516_-	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA
WP_066325442.1\|2151675_2152566_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_148660387.1\|2152901_2154023_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	2.3e-59	38.0
WP_066325451.1\|2154380_2155298_-	aldo/keto reductase	A0A1V0SDE7	Indivirus	6.7e-09	25.9
WP_066325453.1\|2155430_2156528_+	sensor histidine kinase	NA	NA	NA	NA
WP_066325454.1\|2156530_2157163_+	response regulator transcription factor	W8CYM9	Bacillus_phage	5.3e-05	25.3
WP_066325457.1\|2157298_2158231_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.1e-27	31.7
WP_066325459.1\|2158241_2159510_+	ABC transporter permease	NA	NA	NA	NA
WP_084256313.1\|2159506_2160607_+	ABC transporter permease	NA	NA	NA	NA
WP_066325463.1\|2160762_2161872_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.9e-87	50.0
WP_084256315.1\|2162474_2163254_-\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA
WP_066325465.1\|2163250_2163877_-	SdpI family protein	NA	NA	NA	NA
WP_066325470.1\|2163876_2164152_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_066325474.1\|2164308_2165046_-	hypothetical protein	NA	NA	NA	NA
WP_066325476.1\|2165308_2166022_+	NAD-dependent deacylase	S5M4R0	Bacillus_phage	9.1e-46	43.8
WP_066325478.1\|2166053_2167583_-	alkyl hydroperoxide reductase subunit F	G3MA85	Bacillus_virus	1.9e-40	32.0
WP_066325480.1\|2167595_2168159_-	peroxiredoxin	NA	NA	NA	NA
WP_084256317.1\|2168304_2169723_-	PH domain-containing protein	NA	NA	NA	NA
WP_066325482.1\|2169715_2170192_-	PH domain-containing protein	NA	NA	NA	NA
WP_066325485.1\|2170873_2172892_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.0e-46	29.4
WP_066325488.1\|2172888_2174646_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	5.0e-53	31.3
WP_084256319.1\|2174772_2174913_-	YrzI family small protein	NA	NA	NA	NA
WP_066325490.1\|2175530_2176445_-	EamA family transporter	NA	NA	NA	NA
WP_179946272.1\|2176569_2177460_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_066327344.1\|2178120_2178606_+	DinB family protein	NA	NA	NA	NA
WP_066325495.1\|2178708_2180214_-	malate:quinone oxidoreductase	NA	NA	NA	NA
WP_066325496.1\|2180559_2181222_-	DUF975 family protein	NA	NA	NA	NA
WP_066325498.1\|2181430_2181838_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_066325499.1\|2181938_2182322_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_066325501.1\|2182343_2183258_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	3.7e-76	49.2
WP_066325503.1\|2183270_2184818_-	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_066327346.1\|2184929_2186111_-	PucR family transcriptional regulator	NA	NA	NA	NA
WP_066325504.1\|2186258_2186747_-	PaaI family thioesterase	NA	NA	NA	NA
WP_066325508.1\|2188631_2189519_-	ABC transporter permease	NA	NA	NA	NA
WP_066322282.1\|2190446_2191730_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_066325511.1\|2192092_2193061_-	ABC transporter permease	NA	NA	NA	NA
WP_066325512.1\|2193077_2194004_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-20	30.8
WP_066325514.1\|2194000_2195005_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-18	31.6
WP_066325516.1\|2195205_2197311_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.9e-20	47.6
WP_066325517.1\|2197970_2198246_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_066325520.1\|2198271_2198505_-	HNH endonuclease	NA	NA	NA	NA
WP_066325522.1\|2198897_2199254_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.0e-17	46.7
WP_066325528.1\|2201220_2201508_-	hypothetical protein	NA	NA	NA	NA
WP_066327348.1\|2202004_2202778_-	hypothetical protein	A0A2P1JR15	Mycobacterium_phage	4.0e-31	38.5
WP_066325530.1\|2202820_2206231_-	hypothetical protein	NA	NA	NA	NA
WP_066325532.1\|2206227_2207106_-	DUF4007 family protein	NA	NA	NA	NA
WP_066325534.1\|2207395_2211655_-	hypothetical protein	NA	NA	NA	NA
WP_066325536.1\|2211669_2212491_-	DUF4007 family protein	NA	NA	NA	NA
WP_084256321.1\|2212493_2213924_-	ATP-binding protein	NA	NA	NA	NA
WP_066325540.1\|2214552_2215920_-	hypothetical protein	NA	NA	NA	NA
WP_066322944.1\|2216116_2216425_-	hypothetical protein	NA	NA	NA	NA
WP_148660354.1\|2216462_2218013_-\|transposase	IS66 family transposase	S5VLC8	Leptospira_phage	1.4e-46	35.6

DBSCAN-SWA_7

2356184 : 2365232

Burkholderia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066325903.1\|2356184_2357648_-	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	9.5e-58	38.9
WP_066325904.1\|2357634_2358681_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_066325905.1\|2358899_2359148_+	ferredoxin	A0A127AYY7	Bacillus_phage	2.5e-19	53.3
WP_066325906.1\|2359254_2359758_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	1.7e-27	44.8
WP_066325908.1\|2359938_2361513_+	phosphoglycerate dehydrogenase	A0A1B1IVB5	uncultured_Mediterranean_phage	1.1e-32	29.9
WP_066325910.1\|2361589_2362402_-	histidinol-phosphatase	NA	NA	NA	NA
WP_066325911.1\|2362642_2362948_-	hypothetical protein	NA	NA	NA	NA
WP_066325913.1\|2363077_2364070_+	DNA (cytosine-5-)-methyltransferase	E5E3X6	Burkholderia_phage	1.2e-96	55.5
WP_084256337.1\|2364056_2365232_+	hypothetical protein	E5E3X4	Burkholderia_phage	4.5e-34	35.0

DBSCAN-SWA_8

2391198 : 2397065

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066325965.1\|2391198_2391783_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	4.0e-15	38.8
WP_169807007.1\|2391772_2392519_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.2e-09	23.2
WP_066325969.1\|2392636_2393143_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_066325971.1\|2393152_2393497_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_066325973.1\|2393600_2394065_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	9.4e-44	63.5
WP_066325975.1\|2394084_2395278_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.5e-117	53.6
WP_066325977.1\|2395323_2395971_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.6e-41	44.8
WP_066325978.1\|2395976_2397065_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.4e-58	37.5

DBSCAN-SWA_9

2709527 : 2770817

Penguinpox_virus(25.0%)

coat,transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066326441.1\|2709527_2710979_-\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA
WP_066326442.1\|2711099_2712203_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_066326443.1\|2712214_2713054_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_066326446.1\|2713050_2714583_-	L-aspartate oxidase	NA	NA	NA	NA
WP_066326448.1\|2714683_2715829_+	IscS subfamily cysteine desulfurase	NA	NA	NA	NA
WP_066326452.1\|2715825_2716362_+	transcription repressor NadR	NA	NA	NA	NA
WP_066326455.1\|2717002_2717851_-	prephenate dehydratase	NA	NA	NA	NA
WP_066326456.1\|2717868_2718312_-	ACT domain-containing protein	NA	NA	NA	NA
WP_066326457.1\|2718330_2719617_-	GTPase ObgE	NA	NA	NA	NA
WP_066326459.1\|2719633_2720176_-	sporulation initiation phosphotransferase B	NA	NA	NA	NA
WP_044742903.1\|2720301_2720592_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_066326460.1\|2720598_2720937_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_066326461.1\|2720947_2721256_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_066326462.1\|2721463_2722327_-	M50 family metallopeptidase	NA	NA	NA	NA
WP_066326463.1\|2722319_2723066_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_066326465.1\|2723151_2723958_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_066326466.1\|2723960_2724647_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_066326467.1\|2724686_2725199_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_066326470.1\|2725195_2726059_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_066326472.1\|2726075_2727098_-	rod shape-determining protein	NA	NA	NA	NA
WP_066326473.1\|2727238_2727919_-	DNA repair protein RadC	NA	NA	NA	NA
WP_066326475.1\|2727915_2728494_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_066327442.1\|2728602_2729424_-	hypothetical protein	NA	NA	NA	NA
WP_066326476.1\|2729533_2729995_-	type II secretion system protein	NA	NA	NA	NA
WP_066326477.1\|2730009_2730765_-	pilus assembly protein PilO	NA	NA	NA	NA
WP_066326479.1\|2730767_2731352_-	PilN domain-containing protein	NA	NA	NA	NA
WP_066327444.1\|2731335_2732280_-	pilus assembly protein PilM	NA	NA	NA	NA
WP_066326480.1\|2732304_2733072_-	prepilin peptidase	NA	NA	NA	NA
WP_066326481.1\|2733100_2733550_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_066326483.1\|2733618_2734830_-	type II secretion system F family protein	NA	NA	NA	NA
WP_066326485.1\|2734830_2735871_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_066326490.1\|2735881_2737549_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_066326492.1\|2737557_2738814_-	G5 domain-containing protein	NA	NA	NA	NA
WP_066326494.1\|2738831_2739593_-	PRC-barrel domain-containing protein	NA	NA	NA	NA
WP_148660409.1\|2739611_2740784_-	hypothetical protein	NA	NA	NA	NA
WP_066326498.1\|2740895_2741504_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_066326501.1\|2741487_2742054_+	Tfp pilus assembly protein	NA	NA	NA	NA
WP_066326503.1\|2742068_2743697_+	hypothetical protein	NA	NA	NA	NA
WP_066326505.1\|2743706_2744555_-	ankyrin repeat domain-containing protein	A0A068ELT3	Penguinpox_virus	1.4e-05	30.2
WP_066326507.1\|2744574_2748012_-	DUF5057 domain-containing protein	A0A140XG62	Salmonella_phage	1.8e-14	30.0
WP_066326509.1\|2748076_2749372_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_066326510.1\|2749433_2752076_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	8.5e-166	42.3
WP_066326512.1\|2752486_2752675_+	hypothetical protein	NA	NA	NA	NA
WP_066327446.1\|2752639_2753620_-\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_066327448.1\|2753702_2754641_-	stage VI sporulation protein D	NA	NA	NA	NA
WP_084256460.1\|2754870_2755266_-	DUF600 family protein	NA	NA	NA	NA
WP_148284874.1\|2755283_2756027_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_066326515.1\|2757029_2758316_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_066326516.1\|2758329_2759307_-	porphobilinogen synthase	NA	NA	NA	NA
WP_066326517.1\|2759303_2760080_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_066327452.1\|2760076_2761012_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_066326519.1\|2761026_2761860_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_066326522.1\|2761873_2763205_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_066326526.1\|2763399_2763885_+	hypothetical protein	NA	NA	NA	NA
WP_066322703.1\|2764212_2765394_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_066321972.1\|2765704_2767183_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_066327455.1\|2767235_2767688_-	hypothetical protein	NA	NA	NA	NA
WP_148660354.1\|2769266_2770817_-\|transposase	IS66 family transposase	S5VLC8	Leptospira_phage	1.4e-46	35.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP015439

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5169 : 72551

Bacillus_phage(25.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066327480.1\|5169_6672_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_066327482.1\|6714_7950_-	sporulation killing factor system radical SAM maturase	NA	NA	NA	NA
WP_066327485.1\|8048_8237_-	sporulation killing factor	NA	NA	NA	NA
WP_066327495.1\|8733_9384_-	response regulator transcription factor	NA	NA	NA	NA
WP_066327497.1\|9405_11664_-	histidine kinase	NA	NA	NA	NA
WP_066327499.1\|11670_11826_-	competence pheromone ComX	NA	NA	NA	NA
WP_066327501.1\|11847_12738_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_169807018.1\|13795_13963_-	hypothetical protein	NA	NA	NA	NA
WP_066327517.1\|14192_15089_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_066327519.1\|15103_15886_-	ABC transporter permease	NA	NA	NA	NA
WP_066327521.1\|15887_16622_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-29	32.9
WP_032100282.1\|16635_17529_-	hypothetical protein	NA	NA	NA	NA
WP_066327526.1\|17562_20061_-	lantibiotic dehydratase	NA	NA	NA	NA
WP_066327528.1\|20075_21191_-	PqqD family peptide modification chaperone	NA	NA	NA	NA
WP_148660437.1\|21317_21491_-	thiocillin family RiPP	NA	NA	NA	NA
WP_148660438.1\|21515_21698_-	hypothetical protein	NA	NA	NA	NA
WP_066327530.1\|23794_24466_-	nitroreductase family protein	NA	NA	NA	NA
WP_066327532.1\|24458_26162_-	SagB family peptide dehydrogenase	NA	NA	NA	NA
WP_066327534.1\|26145_26796_-	hypothetical protein	NA	NA	NA	NA
WP_066327537.1\|26815_28117_-	YcaO-like family protein	NA	NA	NA	NA
WP_179946302.1\|28292_28535_-	hypothetical protein	NA	NA	NA	NA
WP_066327539.1\|29889_30540_-	response regulator transcription factor	NA	NA	NA	NA
WP_066327541.1\|30561_30783_-	ATP-binding protein	NA	NA	NA	NA
WP_148660440.1\|30820_32371_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	7.9e-71	35.3
WP_066322942.1\|32484_32841_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.0e-18	47.8
WP_084256477.1\|33211_35293_-	histidine kinase	NA	NA	NA	NA
WP_066327499.1\|35299_35455_-	competence pheromone ComX	NA	NA	NA	NA
WP_066327985.1\|35476_36367_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_012574240.1\|37240_37588_-	DUF4260 domain-containing protein	NA	NA	NA	NA
WP_158512141.1\|37649_37799_-	hypothetical protein	NA	NA	NA	NA
WP_148660441.1\|37820_38525_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_066327990.1\|39338_39713_-	DUF2750 domain-containing protein	NA	NA	NA	NA
WP_084256503.1\|39717_40074_-	hypothetical protein	NA	NA	NA	NA
WP_066323190.1\|41856_43227_+\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_066327992.1\|44863_45712_-	hypothetical protein	NA	NA	NA	NA
WP_066327554.1\|46649_49064_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_066327555.1\|49079_50114_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L070	Tupanvirus	7.7e-30	35.6
WP_066327556.1\|50467_51217_-	RNA methyltransferase	NA	NA	NA	NA
WP_066327558.1\|51311_51521_+	small acid-soluble spore protein SspI	NA	NA	NA	NA
WP_066327560.1\|51556_52642_-	M42 family metallopeptidase	NA	NA	NA	NA
WP_066327562.1\|52708_53197_-	dUTP diphosphatase	R9TQ23	Paenibacillus_phage	1.7e-27	42.8
WP_066327564.1\|53252_53612_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_066327566.1\|53637_53838_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_084256507.1\|53860_54406_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.4e-16	32.7
WP_066327567.1\|54721_56653_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	5.5e-114	34.9
WP_066327572.1\|56970_57810_-	putative sporulation protein YtxC	NA	NA	NA	NA
WP_066327573.1\|57894_58833_-	primosomal protein DnaI	S5MU12	Brevibacillus_phage	2.0e-45	37.7
WP_066327575.1\|58847_60233_-	replication initiation and membrane attachment family protein	NA	NA	NA	NA
WP_066327579.1\|60293_60755_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_066327581.1\|60771_61161_-	cytosolic protein	NA	NA	NA	NA
WP_066327582.1\|61268_61643_-	S-adenosylmethionine decarboxylase proenzyme	A0A1D7SGA8	Cyanophage	4.2e-18	42.9
WP_066327588.1\|61880_62909_-	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_066327589.1\|63030_63627_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_066327591.1\|63640_64462_-	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	3.1e-21	28.7
WP_066327595.1\|64477_67105_-	DNA polymerase I	A0A142F1Q9	Bacillus_phage	6.7e-62	32.0
WP_066327601.1\|67289_69041_-	PAS domain-containing protein	W8CYF6	Bacillus_phage	4.2e-44	41.8
WP_066327607.1\|69033_69744_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.3e-44	43.0
WP_084256481.1\|69896_70535_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q331V1	Clostridium_botulinum_C_phage	9.9e-36	53.3
WP_066327609.1\|70773_71226_+\|transposase	transposase	A0A146ICT8	Staphylococcus_phage	1.8e-23	40.1
WP_066322684.1\|71291_72551_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.0e-36	30.6

DBSCAN-SWA_2

143270 : 227377

103

Thermus_phage(44.83%)

capsid,transposase,portal,tail,holin,plate,tRNA,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066327730.1\|143270_143876_-\|tRNA	DUF4479 domain-containing tRNA-binding protein	NA	NA	NA	NA
WP_066327732.1\|143899_144694_-	DUF1444 domain-containing protein	A0A2H4PQY3	Staphylococcus_phage	2.9e-37	61.0
WP_066328010.1\|144706_145018_-	thioredoxin family protein	NA	NA	NA	NA
WP_066327738.1\|145045_146305_-	HNH endonuclease	Q331Y3	Clostridium_botulinum_C_phage	9.9e-80	48.5
WP_066327740.1\|146532_147075_-	DUF84 family protein	NA	NA	NA	NA
WP_066328012.1\|147098_148172_-	M42 family metallopeptidase	NA	NA	NA	NA
WP_066327742.1\|148307_148604_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_066327745.1\|148626_149469_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_066327748.1\|149554_150205_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_066327750.1\|150348_150618_+	YtzH-like family protein	NA	NA	NA	NA
WP_066327752.1\|150703_151480_-	phosphotransferase family protein	NA	NA	NA	NA
WP_066327754.1\|153756_154671_-	NERD domain-containing protein	NA	NA	NA	NA
WP_066327756.1\|154658_155255_-	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA
WP_066327758.1\|155272_156457_-	MFS transporter	NA	NA	NA	NA
WP_066327760.1\|156535_157945_-	dipeptidase PepV	NA	NA	NA	NA
WP_066327762.1\|158206_158428_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_066327763.1\|158513_159296_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_066327764.1\|159362_159626_+	hypothetical protein	NA	NA	NA	NA
WP_066327765.1\|159645_161268_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_084256485.1\|161369_162641_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	7.3e-30	58.5
WP_066327766.1\|162652_162832_-	sporulation protein Cse60	NA	NA	NA	NA
WP_066327769.1\|163136_163448_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_066327772.1\|163517_165935_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	74.9
WP_169807020.1\|166408_166549_-	hypothetical protein	NA	NA	NA	NA
WP_066327774.1\|166560_166824_-	YtzC family protein	NA	NA	NA	NA
WP_066327777.1\|166975_167929_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.9e-60	78.4
WP_066327779.1\|167925_168501_+	class I SAM-dependent methyltransferase	A0A2H4PQV0	Staphylococcus_phage	1.3e-50	54.5
WP_066327787.1\|168554_169619_-	tetraprenyl-beta-curcumene synthase family protein	NA	NA	NA	NA
WP_066327791.1\|169634_170429_-	alpha/beta hydrolase	Q0NPH2	Taterapox_virus	4.1e-15	27.0
WP_066327795.1\|170510_171029_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_066327797.1\|171120_171963_+	C39 family peptidase	NA	NA	NA	NA
WP_066327799.1\|172001_173897_-	asparagine synthase (glutamine-hydrolyzing)	E5EQ62	Micromonas_sp._RCC1109_virus	3.9e-35	27.2
WP_066327801.1\|174066_175275_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.9e-166	76.5
WP_066327804.1\|175766_177353_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	3.1e-195	63.4
WP_066327807.1\|177394_177637_-	DUF2584 domain-containing protein	NA	NA	NA	NA
WP_066324512.1\|177918_179376_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_084256487.1\|179443_181840_+	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	3.0e-08	29.0
WP_066327812.1\|182451_182700_-	DNA-binding protein	A0A290FZJ4	Caldibacillus_phage	4.0e-17	53.7
WP_066328019.1\|183211_183910_-	N-acetylmuramoyl-L-alanine amidase	D6QWP3	uncultured_phage	2.5e-56	54.5
WP_066327814.1\|183912_184329_-\|holin	phage holin family protein	S6AVT9	Thermus_phage	1.5e-64	96.4
WP_169807021.1\|184402_184540_-	hypothetical protein	A0A1B1P890	Bacillus_phage	5.8e-10	69.8
WP_066327820.1\|184541_184922_-	hypothetical protein	S6C455	Thermus_phage	4.5e-44	69.8
WP_066327824.1\|186451_186994_-	YmfQ family protein	S6BFJ0	Thermus_phage	2.6e-85	85.5
WP_066327827.1\|186998_188036_-\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	6.7e-167	86.4
WP_066327831.1\|188028_188439_-	DUF2634 domain-containing protein	S6B9X2	Thermus_phage	1.8e-54	79.3
WP_066327837.1\|188438_188696_-	DUF2577 domain-containing protein	S6C459	Thermus_phage	6.6e-31	80.0
WP_066327840.1\|188695_189655_-	hypothetical protein	S6B1K2	Thermus_phage	1.1e-160	90.8
WP_066327842.1\|189654_190329_-	LysM peptidoglycan-binding domain-containing protein	S6BFJ4	Thermus_phage	5.1e-99	79.5
WP_066327844.1\|190328_192569_-	tape measure protein	S6AVU8	Thermus_phage	9.2e-278	69.3
WP_084256489.1\|192573_192753_-	hypothetical protein	NA	NA	NA	NA
WP_066327845.1\|192752_193154_-\|portal	phage portal protein	S6B9X5	Thermus_phage	6.6e-70	99.2
WP_066327848.1\|193172_193637_-\|tail	phage tail tube protein	S6C462	Thermus_phage	3.1e-79	98.7
WP_066327851.1\|193655_194954_-\|tail	phage tail sheath subtilisin-like domain-containing protein	S6B1K7	Thermus_phage	6.0e-221	88.4
WP_169807022.1\|194953_195127_-	hypothetical protein	S6BFJ9	Thermus_phage	5.2e-16	78.3
WP_066327854.1\|195110_195518_-	hypothetical protein	S6AVU9	Thermus_phage	1.1e-56	80.0
WP_066327856.1\|195507_195906_-	HK97 gp10 family phage protein	S6B9X8	Thermus_phage	1.7e-62	90.1
WP_066327859.1\|195905_196271_-	DUF3599 family protein	S6C466	Thermus_phage	5.4e-55	85.1
WP_066327864.1\|196272_196614_-	hypothetical protein	S6B1K9	Thermus_phage	3.2e-49	85.0
WP_169807023.1\|196616_196763_-	hypothetical protein	S6BFK3	Thermus_phage	3.4e-08	72.9
WP_066327865.1\|196776_197595_-\|capsid	N4-gp56 family major capsid protein	S6AVV3	Thermus_phage	1.5e-148	96.7
WP_066327866.1\|197615_198173_-	phage scaffolding protein	S6B9Y2	Thermus_phage	7.0e-70	90.8
WP_158512142.1\|198294_198465_-	hypothetical protein	NA	NA	NA	NA
WP_066327868.1\|199886_201311_-\|portal	phage portal protein	S6BFK8	Thermus_phage	1.1e-260	94.1
WP_066327870.1\|201323_202586_-\|terminase	PBSX family phage terminase large subunit	S6AVV7	Thermus_phage	7.0e-235	95.0
WP_066327872.1\|202572_203001_-\|terminase	terminase small subunit	S6B9Y6	Thermus_phage	2.0e-56	77.4
WP_169807024.1\|203021_203174_-	hypothetical protein	S6C472	Thermus_phage	1.7e-07	68.0
WP_066327875.1\|203292_203793_-	sigma-70 family RNA polymerase sigma factor	A0A1L2JY33	Aeribacillus_phage	3.8e-59	66.5
WP_084256491.1\|204141_206004_-	DNA primase	A0A2H4J1M0	uncultured_Caudovirales_phage	4.4e-60	28.6
WP_066327877.1\|206008_206242_-	hypothetical protein	S6B9Y8	Thermus_phage	1.4e-16	71.7
WP_084256511.1\|206241_206598_-	dUTP diphosphatase	A0A2H4IZM2	uncultured_Caudovirales_phage	1.5e-33	69.2
WP_066324512.1\|206685_208143_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_066327878.1\|208341_208869_-	hypothetical protein	A6M991	Geobacillus_virus	5.0e-33	41.3
WP_066327881.1\|208881_210570_-	DNA polymerase B	A0A2H4J041	uncultured_Caudovirales_phage	5.2e-76	34.9
WP_066327883.1\|210581_211055_-	hypothetical protein	NA	NA	NA	NA
WP_066327885.1\|211103_211931_-	AAA family ATPase	A0A0A1ENB5	Lactobacillus_phage	1.4e-61	50.4
WP_066327887.1\|211932_212826_-	YqaJ viral recombinase family protein	D2IZK1	Enterococcus_phage	6.7e-06	23.9
WP_066327889.1\|212830_214036_-	DEAD/DEAH box helicase	A0A2H4J064	uncultured_Caudovirales_phage	6.9e-30	27.5
WP_066327891.1\|213995_214313_-	VRR-NUC domain-containing protein	I3VYX6	Thermoanaerobacterium_phage	5.3e-14	42.9
WP_084256493.1\|214384_214543_-	hypothetical protein	NA	NA	NA	NA
WP_066327892.1\|214552_214822_-	hypothetical protein	A0A0A7RWV6	Clostridium_phage	5.7e-09	47.1
WP_169807025.1\|214988_215159_-	hypothetical protein	NA	NA	NA	NA
WP_066327893.1\|215155_215422_-	hypothetical protein	NA	NA	NA	NA
WP_066327894.1\|215418_215715_-	hypothetical protein	NA	NA	NA	NA
WP_066328030.1\|215704_215890_-	hypothetical protein	NA	NA	NA	NA
WP_066327896.1\|216034_216256_+	hypothetical protein	NA	NA	NA	NA
WP_066327897.1\|216227_216431_-	hypothetical protein	S6BFN3	Thermus_phage	2.3e-10	73.3
WP_158512143.1\|216904_217051_-	hypothetical protein	NA	NA	NA	NA
WP_066327902.1\|217128_217365_+	hypothetical protein	A0A0H3U4W2	Staphylococcus_phage	2.5e-24	65.4
WP_066327903.1\|217391_217574_-	hypothetical protein	NA	NA	NA	NA
WP_066327906.1\|217589_218375_-	phage antirepressor KilAC domain-containing protein	A0A0C5AFE7	Paenibacillus_phage	9.7e-41	69.6
WP_066327908.1\|218406_218610_-	helix-turn-helix transcriptional regulator	E5DV75	Deep-sea_thermophilic_phage	2.0e-27	88.1
WP_084256495.1\|218766_219387_+	repressor LexA	E5DV74	Deep-sea_thermophilic_phage	3.2e-87	77.2
WP_066327911.1\|219514_219799_+	DUF3467 domain-containing protein	NA	NA	NA	NA
WP_066327913.1\|219798_220185_+	hypothetical protein	NA	NA	NA	NA
WP_066327915.1\|220153_220396_+	DUF2283 domain-containing protein	NA	NA	NA	NA
WP_066328033.1\|220512_221904_+	recombinase family protein	A6M972	Geobacillus_virus	7.8e-235	86.6
WP_066327917.1\|222626_223400_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.2e-36	38.9
WP_179946303.1\|223320_224193_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_066328036.1\|224176_224665_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	9.3e-18	35.3
WP_066327920.1\|224757_225753_-	sodium-dependent bicarbonate transport family permease	NA	NA	NA	NA
WP_179946304.1\|225888_226254_-	DUF2294 domain-containing protein	NA	NA	NA	NA
WP_066327922.1\|226508_226832_-	hydrolase	NA	NA	NA	NA
WP_084256497.1\|226894_227377_-\|holin	phage holin family protein	Q0H258	Geobacillus_phage	8.6e-24	46.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015438

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP015439

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection