CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013839	Streptococcus pyogenes strain MGAS23530 chromosome, complete genome	5 crisprs	DinG,csm6,cas9,cas1,cas2,csn2,cas4,cas7,cas8c,cas5,cas3,DEDDh,csa3	0	8	3	0

1. NZ_CP013839

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013839_1

• CRISPR_ID: NZ_CP013839_1
• CRISPR_location: 112086-112182
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP013839_1

Consensus_repeat	Method
GCTAGATGGTGAAGAAGTCCCAGAA	CRISPRCasFinder

spacers of NZ_CP013839_1

>1.1|112111|47|NZ_CP013839|CRISPRCasFinder
GTTCCAAGCGAGAGCTTAGAACCTGCGCTTCCCCCATTGATGCCAGA

CRISPR arrays and Neighbor proteins around NZ_CP013839_1

CRISPR arrays

The CRISPR arrays of NZ_CP013839_1

>merge|NZ_CP013839|1|112086-112182|CRISPRCasFinder
GCTAGATGGTGAAGAAGTCCCAGAAGTTCCAAGCGAGAGCTTAGAACCTGCGCTTCCCCCATTGATGCCAGAGCTAGATGGTGAAGAAGTCCCTGAA

>NZ_CP013839|1|1|112086-112182|CRISPRCasFinder
GCTAGATGGTGAAGAAGTCCCAGAA	GTTCCAAGCGAGAGCTTAGAACCTGCGCTTCCCCCATTGATGCCAGA
GCTAGATGGTGAAGAAGTCCCTGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013839.1|WP_031488653.1|114110_116372_+|pilus-ancillary-protein-1	unknown	unknown	gnl|CDD|380246
NZ_CP013839.1|WP_011017256.1|105363_105990_+|DUF4479-and-tRNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|239196
NZ_CP013839.1|WP_020904839.1|108421_109294_-|Hsp33-family-molecular-chaperone-HslO	unknown	unknown	gnl|CDD|234643
NZ_CP013839.1|WP_031577561.1|121060_124438_+|Cna-B-type-domain-containing-protein	unknown	unknown	gnl|CDD|377553
NZ_CP013839.1|WP_148561362.1|118718_119306_+|fimbrial-protein	unknown	unknown	gnl|CDD|274781
NZ_CP013839.1|WP_031488651.1|116911_117961_+|QVPTGV-class-sortase-B-protein-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|274781
NZ_CP013839.1|WP_031488646.1|125721_127128_+|short-chain-fatty-acid-transporter	unknown	unknown	gnl|CDD|224942
NZ_CP013839.1|WP_031488647.1|124703_125369_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP013839.1|WP_003053955.1|106141_106537_+|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|180914
NZ_CP013839.1|WP_021733255.1|117976_118702_+|class-B-sortase	unknown	unknown	gnl|CDD|211782
NZ_CP013839.1|WP_031488649.1|119464_120670_-|YSIRK-targeted-surface-antigen-transcriptional-regulator	unknown	unknown	gnl|CDD|274977
NZ_CP013839.1|WP_031488658.1|103215_104283_-|glutamyl-aminopeptidase	unknown	unknown	gnl|CDD|132151
NZ_CP013839.1|WP_002994067.1|107457_108435_-|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl|CDD|129820
NZ_CP013839.1|WP_002986518.1|104738_105032_+|DUF4651-domain-containing-protein	unknown	unknown	gnl|CDD|339494
NZ_CP013839.1|WP_031488654.1|112976_113825_+|class-C-sortase	unknown	unknown	gnl|CDD|320676
NZ_CP013839.1|WP_002986527.1|102397_103168_-|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl|CDD|237008
NZ_CP013839.1|WP_002992751.1|105028_105346_+|thioredoxin-family-protein	unknown	unknown	gnl|CDD|239245
NZ_CP013839.1|WP_031488652.1|116368_116890_+|signal-peptidase-I	unknown	unknown	gnl|CDD|274044
NZ_CP013839.1|WP_031488656.1|109440_110934_-|hypothetical-protein	unknown	unknown	gnl|CDD|285470
NZ_CP013839.1|WP_031488657.1|106796_107438_-|deoxynucleoside-kinase	unknown	unknown	gnl|CDD|224345

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013839.1|WP_031488653.1|114110_116372_+|pilus-ancillary-protein-1	gnl|CDD|380246	NF033396, pilus_ancill_1, pilus ancillary protein 1.	0
NZ_CP013839.1|WP_011017256.1|105363_105990_+|DUF4479-and-tRNA-binding-domain-containing-protein	gnl|CDD|239196	cd02796, tRNA_bind_bactPheRS, tRNA-binding-domain-containing prokaryotic phenylalanly tRNA synthetase (PheRS) beta chain. PheRS aminoacylate phenylalanine transfer RNAs (tRNAphe). PheRSs belong structurally to class II aminoacyl tRNA synthetases (aaRSs) but, as they aminoacylate the 2'OH of the terminal ribose of tRNA they belong functionally to class 1 aaRSs. This domain has general tRNA binding properties and is believed to direct tRNAphe to the active site of the enzyme.	2.26922e-48
NZ_CP013839.1|WP_020904839.1|108421_109294_-|Hsp33-family-molecular-chaperone-HslO	gnl|CDD|234643	PRK00114, hslO, Hsp33 family molecular chaperone HslO.	3.49499e-148
NZ_CP013839.1|WP_031577561.1|121060_124438_+|Cna-B-type-domain-containing-protein	gnl|CDD|377553	pfam05738, Cna_B, Cna protein B-type domain. This domain is found in Staphylococcus aureus collagen-binding surface protein. The structure of the repetitive B-region has been solved and forms a beta sandwich structure.	2.10969e-21
NZ_CP013839.1|WP_148561362.1|118718_119306_+|fimbrial-protein	gnl|CDD|274781	TIGR03786, strep_pil_rpt, streptococcal pilin isopeptide linkage domain. This model describes a domain that occurs once in the major pilin of Streptococcus pyogenes, Spy0128, but in higher copy numbers in other streptococcal proteins. The domain occurs nine times in a surface-anchored protein of Bifidobacterium longum. All members of this family have LPXTG-type sortase target sequences. The S. pyogenes major pilin has been shown to undergo isopeptide bond cross-linking, mediated by sortases, that are critical to maintaining pilus structural integrity. One such Lys-to-Asn isopeptide bond is to a near-invariant Asn near the C-terminal end of this domain (column 81 of the seed alignment). A Glu in the S. pyogenes major pilin (column 25 of the seed alignment), invariant as Glu or Gln, is described as catalytic for isopeptide bond formation.	1.40224e-19
NZ_CP013839.1|WP_031488651.1|116911_117961_+|QVPTGV-class-sortase-B-protein-sorting-domain-containing-protein	gnl|CDD|274781	TIGR03786, strep_pil_rpt, streptococcal pilin isopeptide linkage domain. This model describes a domain that occurs once in the major pilin of Streptococcus pyogenes, Spy0128, but in higher copy numbers in other streptococcal proteins. The domain occurs nine times in a surface-anchored protein of Bifidobacterium longum. All members of this family have LPXTG-type sortase target sequences. The S. pyogenes major pilin has been shown to undergo isopeptide bond cross-linking, mediated by sortases, that are critical to maintaining pilus structural integrity. One such Lys-to-Asn isopeptide bond is to a near-invariant Asn near the C-terminal end of this domain (column 81 of the seed alignment). A Glu in the S. pyogenes major pilin (column 25 of the seed alignment), invariant as Glu or Gln, is described as catalytic for isopeptide bond formation.	1.03345e-12
NZ_CP013839.1|WP_031488646.1|125721_127128_+|short-chain-fatty-acid-transporter	gnl|CDD|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	0
NZ_CP013839.1|WP_003053955.1|106141_106537_+|single-stranded-DNA-binding-protein	gnl|CDD|180914	PRK07274, PRK07274, single-stranded DNA-binding protein; Provisional.	1.44411e-89
NZ_CP013839.1|WP_021733255.1|117976_118702_+|class-B-sortase	gnl|CDD|211782	TIGR03064, sortase_srtB, sortase, SrtB family. Members of this transpeptidase family are, in most cases, designated sortase B, product of the srtB gene. This protein shows only distant similarity to the sortase A family, for which there may be several members in a single bacterial genome. Typical SrtB substrate motifs include NAKTN, NPKSS, etc, and otherwise resemble the LPXTG sorting signals recognized by sortase A proteins. [Cell envelope, Other, Protein fate, Protein and peptide secretion and trafficking].	4.25195e-104
NZ_CP013839.1|WP_031488649.1|119464_120670_-|YSIRK-targeted-surface-antigen-transcriptional-regulator	gnl|CDD|274977	TIGR04094, AraC_family_transcriptional_regulator, YSIRK-targeted surface antigen transcriptional regulator. Bacteria whose genomes encode only one protein with the YSIRK variant form of signal peptide (TIGR01168) were examined for conserved genes near that one tagged protein. This protein is found adjacent to at various classes of repetitive or low-complexity YSIRK proteins (whether unique in genome or not), in a range of species (Enterococcus faecalis X98, Ruminococcus torques, Coprobacillus sp. D7, Lysinibacillus fusiformis ZC1, Streptococcus equi subsp. equi 4047, etc). The affliated YSIRK proteins include Streptococcal protective antigen (see ) and proteins with the Rib/alpha/Esp surface antigen repeat (see TIGR02331). The last quarter of this protein has an AraC family helix-turn-helix (HTH)transcriptional regulator domain.	1.28629e-70
NZ_CP013839.1|WP_031488658.1|103215_104283_-|glutamyl-aminopeptidase	gnl|CDD|132151	TIGR03107, Glutamyl_aminopeptidase, glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP013839.1|WP_002994067.1|107457_108435_-|tRNA-dihydrouridine-synthase-DusB	gnl|CDD|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	1.81907e-121
NZ_CP013839.1|WP_002986518.1|104738_105032_+|DUF4651-domain-containing-protein	gnl|CDD|339494	pfam15513, DUF4651, Domain of unknown function (DUF4651). family of short, secreted proteins specific to the Streptococcus genus, with distant homologs, not recognized by this HMM, found in other cocci. In all sequenced genomes, proteins from this family appear in a conserved genomic context with an thioredoxin, tRNA synthase and tRNA binding protein, but the functional implication of this is unclear.	8.86115e-29
NZ_CP013839.1|WP_031488654.1|112976_113825_+|class-C-sortase	gnl|CDD|320676	cd05827, Sortase_C, Sortase domain found in class C sortases. Class C sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They function as pilin polymerases responsible for the assembly of pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. First, one or more class C sortases form the long thin shaft of the pilus through linking together pilin subunits via isopeptide bonds. The base of the pilus is then anchored to the cell wall by a housekeeping sortase or, in some cases, the class C sortase itself. Depending upon the organism both the number and type of sortase enzymes involved varies, and in some cases, accessory factors appear to be needed. In three-component spaA pilus from Corynebacterium diphtheriae, the prototypical class C sortase (named Cd-SrtA) catalyzes polymerization of the SpaA-type pilus, consisting of the shaft pilin SpaA, tip pilin SpaC and minor pilin SpaB. The pilus shaft is then attached to the cell wall by a housekeeping class E sortase, Cd-SrtF. In the absence of Cd-SrtF, Cd-SrtA attaches the pilus to the cell wall, albeit at a reduced rate. Cd-SrtA can recognize two distinct sorting signals (LPLTG in SpaA and SpaC, and LAFTG in SpaB) and it can employ lysine residues that originate from different proteins (either Lys190 within the pilin motif of SpaA or Lys139 in SpaB). However, Cd-SrtA cannot be able to polymerize the major pilin subunit SpaH, even though it contains LPLTG motif. In two-component pili of prototypical Bacillus cereus, the class C sortase (named Bc-SrtD) cleaves related sorting signals within a major pilin protein BcpA (LPVTG) and a minor tip pilin BcpB (IPNTG), and catalyzes a transpeptidation that joins the threonine residues in each signal to the side-chain of Lys162 in BcpA (located within a pilin motif). Unlike the SpaA pilus in C. diphtheriae, in B. cereus Bc-SrtD is unable to covalently attach the pilus to the cell wall without the help of the housekeeping sortase.	6.48824e-73
NZ_CP013839.1|WP_002986527.1|102397_103168_-|pyrroline-5-carboxylate-reductase	gnl|CDD|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	6.76272e-107
NZ_CP013839.1|WP_002992751.1|105028_105346_+|thioredoxin-family-protein	gnl|CDD|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	4.4889e-26
NZ_CP013839.1|WP_031488652.1|116368_116890_+|signal-peptidase-I	gnl|CDD|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	1.66248e-39
NZ_CP013839.1|WP_031488656.1|109440_110934_-|hypothetical-protein	gnl|CDD|285470	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This corresponds to the PRD like region.	2.50202e-60
NZ_CP013839.1|WP_031488657.1|106796_107438_-|deoxynucleoside-kinase	gnl|CDD|224345	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism].	7.07595e-97

Protein sequences

>NZ_CP013839.1|WP_031488656.1|109440_110934_-|hypothetical-protein
MIEKYLESSIESKCQLIVLFFKTSYLSITEAAEKTGLTFLQLNHYCEELNAFFPGSLSMTIQKRMISCQFTHPFKETYLYQLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAYRMREALVPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKFGIKVYDLTQQDKNTIHSFLSHSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSRDIIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQCCQLFEENDTFRLLLNPIITLLPNLKEQKASLVKALMFFSKSFLFNLQHFIPETNLFISPYYKGNQKLYTSLKLIVEEWMAKLPGKRYLNHKHFHLFCHYVEQILRNIQPPLVVVFVASNFINAHLLTDSFPRYFSDKSINFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVQHELTKGIAVAEISFDESILSIQELIYQVKEEKFQADLTKQLT
>NZ_CP013839.1|WP_020904839.1|108421_109294_-|Hsp33-family-molecular-chaperone-HslO
MDKIIKSIAQSGAFRAYVLDSTETVALAQEKHNTLSSSTVALGRTLIANQILAANQKGDSKITVKVIGDSSFGHIISVADTKGHVKGYIQNTGVDIKKTATGEVLVGPFMGNGHFVTIIDYGTGNPYTSTTPLITGEIGEDFAYYLTESEQTPSAIGLNVLLDENDKVKVAGGFMVQVLPGASEEEIARYEKRLQEMPAISYLLASKNHVDALLEAIYGDEPYKRLSEEPLSFQCDCSRERFEAALMTLPKADLQAMIDEDKGAEIVCQFCGTKYQFNESDLEAIINDKA
>NZ_CP013839.1|WP_002994067.1|107457_108435_-|tRNA-dihydrouridine-synthase-DusB
MIKLNSSFRIGDVEIPRRTVLAPMAGVTNSAFRTIAKEFGAGLVVMEMISEKGLLYNNEKTLHMLHIDENEHPMSIQLFGGDAEGLKRAADFIQTNTKADIVDINMGCPVNKVVKNEAGAKWLRDPDKIYHIVKEVTSVLDIPLTVKMRTGWADSSLAVENALAAESAGVSALAMHGRTREQMYTGTCDHETLARVSKAITKIPFIGNGDVRSVQDAKFMIEEIGVDAVMIGRAAMNNPYLFTQINHFFETGQELPDLPFAKKLDIAKDHLKRLINLKGETIAVREFRGLAPHYLRGTAGAAKVRGAVSRAETLAEVEAIFETVR
>NZ_CP013839.1|WP_031488657.1|106796_107438_-|deoxynucleoside-kinase
MLIVLAGTIGAGKSSLAAALGEHLGTDVFYEAVDNNPVLDLYYQDPKKYAFLLQIYFLNKRFKSIKEAYQADNNILDRSIFEDELFLKLNYKNGNVTKTELDIYQELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQYYHQVHGEYPTWYEDYEVSPKMKIDGNSLDFVQNPQDLATVLKMIDTKLKELHLL
>NZ_CP013839.1|WP_003053955.1|106141_106537_+|single-stranded-DNA-binding-protein
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTRKYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLVDLVLEEDTLPF
>NZ_CP013839.1|WP_011017256.1|105363_105990_+|DUF4479-and-tRNA-binding-domain-containing-protein
MIFAYNKEQVGDVLMVILQDTKDIKRQVERKGKVARVFAEESGKTLAWNIFEASSLITIEGNGQIFLTDEDLARLNAELAKEGFSERLEPIVGPVFVVGQIVEMVAHPDSDHLNICQVAIGEDQTVQIVAGAPNAALGLKTIVALPGAIMPNGSLIFPGKLRGEESYGMMCSPRELALPNAPQKRGIIELDESAVVGEAFDPAKHWKG
>NZ_CP013839.1|WP_002992751.1|105028_105346_+|thioredoxin-family-protein
MIRPTSYESLAALIEKEDKLVLFFTADWCPDCQFIYPIMPEIEAELTDMTFVCVNRDQFIEVAQKWNIFGIPSFVVIEKGQEVGRLVNKMRKTKTEIMHFLAAYQ
>NZ_CP013839.1|WP_002986518.1|104738_105032_+|DUF4651-domain-containing-protein
MRDMSKKKIGMISGIFGFSLAIGLGIVIKDYCQDRQRRQMTRDLRTFFSPLGQIEVLYINPCQVKQDYISGGVVMSNGKQYQFTYHSRQISFEEDKG
>NZ_CP013839.1|WP_031488658.1|103215_104283_-|glutamyl-aminopeptidase
MTDLFSKIKEVTELDGIAGYEHSVRDYLRTKITPLVDRVETDGLGGIFGIRDSKAEKAPRILVAAHMDEVGFMVSDIKVDGTLRVVGIGGWNPLVVSSQRFTLYTRTGQVIPLISGSVPPHFLRGANGSASLPNIEDIVFDGGFTDKAEAESFGITPGDIIVPQSETILTANQKNIISKAWDNRYGVLMITEMLEALKGQDLNNTLIAGANVQEEVGLRGAHVSTTKFDPELFFAVDCSPAGDIYGNPGTIGDGTLLRFYDPGHVMLKDMRDFLLTTAEDAGVNFQYYCGKGGTDAGAAHLQNGGVPSTTIGVCARYIHSHQTLYAMDDFVEAQAFLQAIIKKLDRSTVDLIKRY
>NZ_CP013839.1|WP_002986527.1|102397_103168_-|pyrroline-5-carboxylate-reductase
MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLTLPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGMPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTTTVSSAIDKTIDKAKSL
>NZ_CP013839.1|WP_031488654.1|112976_113825_+|class-C-sortase
MTERLKNLGILLLFLLGTAIFLYPTLSSQWNAYRDRQLLSTYHKQVTQKKPSEMEEVWQKAKAYNARLGIQPVPDVFSFRDGIHDKNYESLLQIENNDIMGYVEVPSIKVTLPIYHYTTDEVLTKGAGHLVGSALPVGGDGTHTVISAHRGLPSAEMFTNLNLVKRGDTFYFRVLNKVLAYKVDQILTVEPDQVTSLSEVMGKDYATLVTCTQYGVNTKRLLVRGHRIAFHYKKYQQAKKAMKLVDKSRMWTEVVCAAFGVVIAIILVFMYSKMTDKKVIKN
>NZ_CP013839.1|WP_031488653.1|114110_116372_+|pilus-ancillary-protein-1
MNNKKLQKKQDAPRVSNRKPKQLTVTLVGVFLMLLVLIGFEGKVRAAHELVEVPVPIFHNPDPQSDYQWYGYEAYTGGYPKYDLFKTYYHDLRVNLHGSKSYQVYCFNVHKHYPRPSQSFDRKWYKKLDGTAENFDSLAMEPRVRKEELTKKLRAVMYNAYPNDANGIMKDLEPLNAIKVTQEAVWYYSDNSPINPDESFKSEALANKISATQISLMREALKQLIAPDLDEKQSRRVPDGYQLSIFESENKDYQNLLAAEEVPIQPPKPGDKPPLPPVQTKQTSVIIRKYAEGDYSKLLEGATLKLAQIEGSGFQEKIFDSNKSGEKVELPNGTYVLSELKPPQGYGVATPITFKVAAGKVLIKNKEGQFVENQNKEIAEPYSVTAFNDFEEIGYLSDFNNYGKFYYAKNTNGTNQVVYCFNADLHSPPDSYDHGANIDPDVSESKEIKYTHVSGYDLYKYAVTPRDKDADLFLKHIKKILDKGYKKKGDTYKTLTEAQFRAATQLAIYYYTDSADLTTLKTYNDNKGYHGFDKLDDATLAVVHELITYAEDVTLPMTQNLDFFVPNSSRYQALIGTQYHPNELIDVISMEDKQAPIIPITHKLTISKTVTGTIADKKKEFNFEIHLKSSDGQAISGTYPTNSGELTVTDGKATFTLKDGESLIVEGLPSGYSYEITETGASDYEVSVNGQNVPDGKVMKELVKEDETVAFENRKDLVPPTGLTTDGAIYLWLLLLVPFGLLVWLFGRKGTKK
>NZ_CP013839.1|WP_031488652.1|116368_116890_+|signal-peptidase-I
MTNYLNRLNENPLFKAFIRLVLKISIIGFLGYILFQYIFGVMIINTNDMSPALSAGDGVLYYRLTDRYHINDVVVYEVDNTLKVGRIAAQAGDEVSFTQEGGLLINGHPPEKEVPYLTYPHSSGPNFPYKVPTGTYFILNDYREERLDSRYYGALPINQIKGKISTLLRVRGI
>NZ_CP013839.1|WP_031488651.1|116911_117961_+|QVPTGV-class-sortase-B-protein-sorting-domain-containing-protein
MKKNKLLLATAILATALGTASLNQNVKAETAGVVSSGQLTIKKSITNFNDDTLLMPKATFTFDVKPVDVTGEEKDTASGLKIQKGIAGVASQTIQYDNTDKPTNKEKAVNFDFSTVTFPNVGVYRYEVSEQAGDVKGITYDSKKWTVDVYVVNENNKFTPKYIVSKETTDSSKKPIVFNNELKTTSLTIKKEVTGNSGDKTSDFTFTLLLKENTQFETGQKVKATKKKSGAEEETVEVTIGKQYTFTLKDSEELILDKLPIGITYQVDETDKNKEQYETSAKMTEDSKEAQGYTLNDLKTTDETADTITVTNKRNLPIPTGVVGILAPFAVLSIVAIGGVIYITKRKKA
>NZ_CP013839.1|WP_021733255.1|117976_118702_+|class-B-sortase
MMMTIVQVINKAIDTLILIFCLVVLFLAGFGLWDSYHLYQQADASNFKKFKTAQQQPKFEDLLALNEDVIGWLNIPGTHIDYPLVQGKTNLEYINKAVDGSVAMSGSLFLDTRNHNDFTDDYSLIYGHHMAGNAMFGEIPKFLKKDFFNKHNKAIIETKERKKLTVTIFACLKTDAFDQLVFNPNAITNQDQQRQLVDYISKRSKQFKPVKLKHHTKFVAFSTCENFSTDNRVIVVGTIQE
>NZ_CP013839.1|WP_148561362.1|118718_119306_+|fimbrial-protein
MRKYWKMLFSVVMILTMLAFNQTVLAKDSTVQTSISVENVLERAGDSTPFSVALESIDAMKTIEEITIAGSGKASFSSLTFTTVGQYTYRVYQKPSQNKDYQADTTVFDVLVYVTYDEDGTLVAKVISRRAGDEEKSAITFKPKRLVKPIPPRQPDIPKTPLPLAGEVKSLLGILSIVLLGLLVLLYVKKLKSKL
>NZ_CP013839.1|WP_031488649.1|119464_120670_-|YSIRK-targeted-surface-antigen-transcriptional-regulator
MVIFDLKHVQTLHSLSQLPISVMSQDKALIQVYGNDDYLLCYYQFLKHLAIPQATQDVIFYEGLFEESFMIFPLCHYIIAIGPFYPYSLNKDYQEQLANNFLKHSSHRSKEELLSYMALVPHFPINNVRNLLIAIDAFFDTQFETTCQQTIHQLLQHSKQMTADPDIIHRLKHISKASSQLPPVLEHLNHIMDLVKLGNPQLLKQEINRIPLSSITSSSISALRAEKNLTVIYLTRLLEFSFVENTDVAKHYSLVKYYMALNEEASDLLKVLRIRCAAIIHFSESLTNKSISDKRQMYNSVLHYVDSHLYSKLKVSDIAKRLYVSESHLRSVFKKYSNISLQHYILSTKIKEAQLLLKRGIPVGEVAKSLYFYDTTHFHKIFKKYTGISSKDYLAKYRDNI
>NZ_CP013839.1|WP_031577561.1|121060_124438_+|Cna-B-type-domain-containing-protein
MTQKNSYKLSFLLSLTGFILGLLLVFIGLSGVSVGHAETRNGANKQGSFEIKKVDQNNKPLPGATFSLTPKDGKGKPGQTFTSNDKGIVDAQNLQPGTYTLKEETAPDGYDKTSRTWTVTVYENGYTKLVENPYNGEIISKAGSKDVSSSLQLEKSTMSVVSKYGEQEKTSNLADFYRNHAAYFKMSFELKQKDKSETINPGDTFVLQLDQRLNPKGISQDIPKIIYDSANSPLAIGKYDADSHQLIYTFTDYIAGLDKVRLSAELSLFLENKEVLENTNISDFKSTIGGQEITYKGTVNVIYGNKSGDSNNYVKNILSNVGGSIESYNTQTGDFTWYVYVNPKKQSINYSILNLWGFGRARSNTNNLETNANTSSAQLEKVEIYEVKEDYTLPTSYGVDITKLTLRTDITVGNKDGFPMTKRQRIDFKDNLKDGKRFVVKVTGKTDQSGKPLVVQSNLASFSTNQDYVDLKISGGNVYFQNEIALSPSKGSGSGKSEFTKPSITVANLKRVAQLRFKKMSTDNVPLPEATFELRSSTSDSQKVEAKSNEQGEVHFKDLNSGTYDLYEKQAPKGYQQVTEKLATVTVDTTKPAEEMVKWEKTHPFVKVEVNKEVTIVNHKETLTFSGKKIWENDRPDQRPAKIQVQLLQNRQKMSDKVQEVTKDNDWSYHFKDLPKYDDKNQEYKYSVEEVKVPDGYKVSYLRNDIFNTRETEFVFEQNNFNLEFGNAEIKGQSGSKIIDEDTLTSFKGKKIWKNDTAENRPQAIQVQLYADGVAVEGQTKFISGSGNEWSFEFKNLKKYNGTGNDIMYSVKEVTVPTGYDVTYSANDIINTKREVITQQGPNLEIEEMLPLESGASGGTTTVEDSRPVDTLSGLSSEQGQSGDMTIEEDSATHIKFSKRDIDGKELAGATMELRDSSGKTISTWISDGQVKDFYLMPGKYTFVETAAPDGYEIATAITFTVNEQGQVTVNGKATKGDAHIVMVDAYKPTKGSGQVIDIEEKLPDEQGHSGSTTEIEDSKSSDVIIGGQGQIVETTEDTQTGMHGDSGCKTEVEDTKLVQSFHFDNKESESNSEIPKKDKPKSNTSLPATGEKQHNMFFWMVTSCSLISSVFVISLKTKKRLSSC
>NZ_CP013839.1|WP_031488647.1|124703_125369_-|hypothetical-protein
MKRCNKYLFTSLLAVSILFSSYKSVHAHDNIDEKGKVHLYWQGNYYVDNYVDYTKTLVDNNNSIEWTVTFNSAKEQWVYPDFSVFLPKGVKAPKEITYEHHYWDGTVDSKTRSNTQWHYDWENQKTNFNQEFDKFPGYTGWSPSLDKFYKLKNDGKFSHVLVDTYGRQSHTYFSHKMVWKFKTELEEGYKDKWNKLPFIAGIKQNNPLAASFPSYKGEFGE
>NZ_CP013839.1|WP_031488646.1|125721_127128_+|short-chain-fatty-acid-transporter
MNNIKTKKRFMDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLSFAMQMTILLATGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSLVVGSIFGFLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLSGAAVLYSATPDYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLVPLCFALLAHPKDETKIMELDDEIYHHSLDTASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFLVVGLSGLDLNSFNFLFLGLGLLLCGQQGPEYYGSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDLGKILQAYQLGDATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF

Crispr_ID: NZ_CP013839_2

• CRISPR_ID: NZ_CP013839_2
• CRISPR_location: 756938-757303
• CRISPR_type: TypeII
• Repeat_type: II-A
• Spacer_info: 5 spacers
• Cas_protein_info: csn2,cas2,cas1,cas9

Consensus repeat of NZ_CP013839_2

Consensus_repeat	Method
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	PILER-CR
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	CRT

spacers of NZ_CP013839_2

>2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT
TATCACTAACTCCCTATTGCGTGGGGAACT
>2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT
TGTTTCTTGCAATCGCAATATTTGGGATGA
>2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT
ACAGAATCATAAGTTCCTGTCATGCCGTAT
>2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT
TTAGAGGCCTATTTCACAGACAAAGACATC
>2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT
GACTCATCCCAACTACCGTAAGCCCTAAAG

CRISPR arrays and Neighbor proteins around NZ_CP013839_2

CRISPR arrays

The CRISPR arrays of NZ_CP013839_2

>merge|NZ_CP013839|2|756938-757303|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACTATCACTAACTCCCTATTGCGTGGGGAACTGTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACTGTTTCTTGCAATCGCAATATTTGGGATGAGTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACACAGAATCATAAGTTCCTGTCATGCCGTATGTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACTTAGAGGCCTATTTCACAGACAAAGACATCGTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACGACTCATCCCAACTACCGTAAGCCCTAAAGGTTTTAGAGCTATGCTGTCTTGAATGGTCTCCATTC

>NZ_CP013839|2|1|756938-757237|PILER-CR
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TATCACTAACTCCCTATTGCGTGGGGAACT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TGTTTCTTGCAATCGCAATATTTGGGATGA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	ACAGAATCATAAGTTCCTGTCATGCCGTAT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TTAGAGGCCTATTTCACAGACAAAGACATC
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC

>NZ_CP013839|2|2|756938-757303|CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TATCACTAACTCCCTATTGCGTGGGGAACT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TGTTTCTTGCAATCGCAATATTTGGGATGA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	ACAGAATCATAAGTTCCTGTCATGCCGTAT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TTAGAGGCCTATTTCACAGACAAAGACATC
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	GACTCATCCCAACTACCGTAAGCCCTAAAG
GTTTTAGAGCTATGCTGTCTTGAATGGTCTCCATTC

>NZ_CP013839|2|1|756938-757303|CRT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TATCACTAACTCCCTATTGCGTGGGGAACT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TGTTTCTTGCAATCGCAATATTTGGGATGA
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	ACAGAATCATAAGTTCCTGTCATGCCGTAT
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	TTAGAGGCCTATTTCACAGACAAAGACATC
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	GACTCATCCCAACTACCGTAAGCCCTAAAG
GTTTTAGAGCTATGCTGTCTTGAATGGTCTCCATTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013839.1|WP_010922249.1|748995_749760_+|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl|CDD|319832
NZ_CP013839.1|WP_080465014.1|759934_761347_+|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl|CDD|273344
NZ_CP013839.1|WP_031488319.1|749759_750392_+|TIGR01906-family-membrane-protein	unknown	unknown	gnl|CDD|226884
NZ_CP013839.1|WP_031488322.1|746399_747041_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP013839.1|WP_002989935.1|763339_763765_+|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl|CDD|225446
NZ_CP013839.1|WP_002989931.1|765097_765925_+|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	unknown	unknown	gnl|CDD|226239
NZ_CP013839.1|WP_031488323.1|744920_746276_+|phosphoglucosamine-mutase	unknown	unknown	gnl|CDD|237670
NZ_CP013839.1|WP_031488320.1|748243_748996_+|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl|CDD|226401
NZ_CP013839.1|WP_002989934.1|763783_764275_+|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	unknown	unknown	gnl|CDD|225976
NZ_CP013839.1|WP_002989943.1|757953_759786_+|elongation-factor-4	unknown	unknown	gnl|CDD|235462
NZ_CP013839.1|WP_031488321.1|747103_748234_+|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl|CDD|236309
NZ_CP013839.1|WP_031488313.1|762113_763133_+|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl|CDD|225411
NZ_CP013839.1|WP_002984836.1|767713_768502_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|227095
NZ_CP013839.1|WP_002989951.1|755841_756183_+|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP013839.1|WP_011284751.1|766060_767710_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP013839.1|WP_031488317.1|754975_755845_+|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|187851
NZ_CP013839.1|WP_002984844.1|764291_765101_+|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	unknown	unknown	gnl|CDD|226238
NZ_CP013839.1|WP_031488318.1|750869_754976_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226044
NZ_CP013839.1|WP_010922255.1|761546_761984_+|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl|CDD|234692
NZ_CP013839.1|WP_032460799.1|756172_756835_+|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl|CDD|213408

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP013839.1|WP_031488317.1|754975_755845_+|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	1.6e-104	343.6	0.3
NZ_CP013839.1|WP_002989951.1|755841_756183_+|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	2.2e-57	187.1	1.1
NZ_CP013839.1|WP_031488318.1|750869_754976_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	0	1586.1	48.8
NZ_CP013839.1|WP_032460799.1|756172_756835_+|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	2.5e-108	355.4	17.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013839.1|WP_010922249.1|748995_749760_+|TIGR01457-family-HAD-type-hydrolase	gnl|CDD|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.29438e-128
NZ_CP013839.1|WP_080465014.1|759934_761347_+|LPXTG-cell-wall-anchor-domain-containing-protein	gnl|CDD|273344	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds].	7.09699e-12
NZ_CP013839.1|WP_031488319.1|749759_750392_+|TIGR01906-family-membrane-protein	gnl|CDD|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	1.63112e-87
NZ_CP013839.1|WP_002989935.1|763339_763765_+|PTS-sugar-transporter-subunit-IIA	gnl|CDD|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	3.64459e-31
NZ_CP013839.1|WP_002989931.1|765097_765925_+|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	gnl|CDD|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
NZ_CP013839.1|WP_031488323.1|744920_746276_+|phosphoglucosamine-mutase	gnl|CDD|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP013839.1|WP_031488320.1|748243_748996_+|acyl-[acyl-carrier-protein]-thioesterase	gnl|CDD|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	1.15262e-108
NZ_CP013839.1|WP_002989934.1|763783_764275_+|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	gnl|CDD|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	8.80769e-55
NZ_CP013839.1|WP_002989943.1|757953_759786_+|elongation-factor-4	gnl|CDD|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP013839.1|WP_031488321.1|747103_748234_+|oxygen-independent-coproporphyrinogen-III-oxidase	gnl|CDD|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_CP013839.1|WP_031488313.1|762113_763133_+|YeiH-family-putative-sulfate-export-transporter	gnl|CDD|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	5.3437e-104
NZ_CP013839.1|WP_002984836.1|767713_768502_+|response-regulator-transcription-factor	gnl|CDD|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	5.79862e-82
NZ_CP013839.1|WP_002989951.1|755841_756183_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.79e-58
NZ_CP013839.1|WP_011284751.1|766060_767710_+|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	7.60374e-78
NZ_CP013839.1|WP_031488317.1|754975_755845_+|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.67971e-131
NZ_CP013839.1|WP_002984844.1|764291_765101_+|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	gnl|CDD|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	3.81104e-76
NZ_CP013839.1|WP_031488318.1|750869_754976_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP013839.1|WP_010922255.1|761546_761984_+|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl|CDD|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.70819e-84
NZ_CP013839.1|WP_032460799.1|756172_756835_+|type-II-A-CRISPR-associated-protein-Csn2	gnl|CDD|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	5.55445e-120

Protein sequences

>NZ_CP013839.1|WP_032460799.1|756172_756835_+|type-II-A-CRISPR-associated-protein-Csn2
MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYKYEEDSELKFFDHKMKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLVVFVNSGAFLTKEEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKNMV
>NZ_CP013839.1|WP_002989951.1|755841_756183_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>NZ_CP013839.1|WP_031488317.1|754975_755845_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSETVKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSDTFSYNDKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>NZ_CP013839.1|WP_031488318.1|750869_754976_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLADSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASRVDAKAILSARLSKSRRLENLIAQLPGEKRNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLAKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPEFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSDILKEYPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWKQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVRKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNFGAPAAFIYFDTTIGRNRYKSIKEVLDATLIHQSITGLYETRIDLSQLGGD
>NZ_CP013839.1|WP_031488319.1|749759_750392_+|TIGR01906-family-membrane-protein
MVENTKLLCSWGWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYPTLKTFTQRLKTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHQVLFVGDSSWLFDPLKDPVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARWQRLNVE
>NZ_CP013839.1|WP_010922249.1|748995_749760_+|TIGR01457-family-HAD-type-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>NZ_CP013839.1|WP_031488320.1|748243_748996_+|acyl-[acyl-carrier-protein]-thioesterase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNLLVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGDLLVDILAYFALLNPDTRKVATIPEDLVAPFKTDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCEFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESETD
>NZ_CP013839.1|WP_031488321.1|747103_748234_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFDSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTITNLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>NZ_CP013839.1|WP_031488322.1|746399_747041_+|hypothetical-protein
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTQKQDTQNRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQTLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQTYLLADMQEKLPSLSIMVSQESSKLFYQEQGFVLHAKGCKPGNENDSDVCQLLKYFSKP
>NZ_CP013839.1|WP_031488323.1|744920_746276_+|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKDRAMEVPAIAKIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN
>NZ_CP013839.1|WP_002989943.1|757953_759786_+|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDAKK
>NZ_CP013839.1|WP_080465014.1|759934_761347_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKEKEETKTVNKTKQNKTKQNKTKHSLLCRYGLTSAAALLLTFGGASAVKADNQQLELAKKKNDLMTELHSNLEQMKSGTLPSSNGDVEESTVKKILKYLEERDRLEDQWREKLFEGMQNKLFDGQDGAKGEPGAKGEPGPKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGEPGPKGEPGAKGEPGPKGEPGPKGEPGAKGEPGAKGEPGAKGEPGPKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGEPGAKGDRGETGDKGEQGPAGKDGDRGPVGPAGKDGQDGKDGLPGKDGKDGQDGKDGLPGKDGKDGKDGQDGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKPAPKTPEVPQKPDTAPHTPKTPQIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>NZ_CP013839.1|WP_010922255.1|761546_761984_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
METSDELKQRIGDLSYEVTQHAATESPFTGEYDNFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>NZ_CP013839.1|WP_031488313.1|762113_763133_+|YeiH-family-putative-sulfate-export-transporter
MSTHLRKLPGLLLCLLLALPAWCLGRLFPIIGAPVFAILLGMLLALFYEHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIISTIATALLVAYGSQKWLRLDVNTATLVGVGSSICGGSAIAATAPVIKAKDDEVAKAISVIFLFNMLAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDALHHSNTLNGATIVKLTRTLAILPITLGLSLYRAKKEHDIVTEENFSLRKSFPRFILFFLLASLITTLMTSLGVSADSFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKMGGQAILLGAICWVAITLVSLAMQLSLGIW
>NZ_CP013839.1|WP_002989935.1|763339_763765_+|PTS-sugar-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQALETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>NZ_CP013839.1|WP_002989934.1|763783_764275_+|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRATDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>NZ_CP013839.1|WP_002984844.1|764291_765101_+|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>NZ_CP013839.1|WP_002989931.1|765097_765925_+|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC
>NZ_CP013839.1|WP_011284751.1|766060_767710_+|sensor-histidine-kinase
MRGEQVEEHFKKQLQDDISRHFSYQSLMLSLLLIGLFIIFSLAPQQLGLYRDINATATRYHRLISKQEALLDDLGKNSLLPFLNKNLSTADLSKHYFHLRHSSQTSPELLLFSPSQDLLFASNPHLGNVFSKSVYIQEVLRAAHPPKTLFKVAMDSEDGHYLMIIKPMIDQNQLKGYAFLVMSGKDFLHPTKTLTSELVIADKLDNTFTFSNREFIASSLDKINSQYLHHYFVFQDNRAFITRKVALQGGLWLYMYRPLIPMVSVMLFSLISSAVIFVILQRKSSGLANRIAAKNSRAINQMVRDMSAISRQEKRRIDLESQDEFQYLSDQINQMVERLQQLHDKTLDLETQKLLFEKRMLEAQFNPHFLYNTLETILITSHYDSALTEKIVIQLTKLLRYSLTDSSKPVLLKDDLSVIESYLVINQVRFEELQYSINLSPDLDSLAVPKLFLLPLIENAIKYGLKERHDVKINIACYYQDDHIIFSVRDNGSGIDAHHQKVIREQLEAGESHHGLINSYRRLKYHFSEVSLVFDQGDKQFNVSYHVKE
>NZ_CP013839.1|WP_002984836.1|767713_768502_+|response-regulator-transcription-factor
MYKLVIIEDEHIIRKWLRYAIDYKALDILVIGEAKDGKEGAVLIKESQPDIVLTDINMPIMTAFDMFEATKDQTYAKIILSGYADFPNARSAIHYGVLEFLTKPIEKAALWECLQTIIAKIEKQKGSNQKTDACVYIPLPQMTDQIPEVVKDILEWVHAHFQDKISTSRLAHDLGYSESYIYQNIKKHLQMPLSDYINQYRINQAIQLMQQEPDLMVYEIAQAVGIYDYRYFDRVFKKYLGQTVKAFKEEHFMKDTDRSKPC

Crispr_ID: NZ_CP013839_3

• CRISPR_ID: NZ_CP013839_3
• CRISPR_location: 953307-953408
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP013839_3

Consensus_repeat	Method
AATAATTGGTATAGTCTAATTATA	CRISPRCasFinder

spacers of NZ_CP013839_3

>3.1|953331|54|NZ_CP013839|CRISPRCasFinder
CCGATAAAAACAGTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA

CRISPR arrays and Neighbor proteins around NZ_CP013839_3

CRISPR arrays

The CRISPR arrays of NZ_CP013839_3

>merge|NZ_CP013839|3|953307-953408|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATACCGATAAAAACAGTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACATAAAATTGGTATAGTCTAATTATA

>NZ_CP013839|3|3|953307-953408|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATA	CCGATAAAAACAGTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA
TAAAATTGGTATAGTCTAATTATA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013839.1|WP_002984449.1|953431_953989_-|signal-peptidase-I	unknown	unknown	gnl|CDD|274044
NZ_CP013839.1|WP_002984451.1|951441_953256_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl|CDD|234729
NZ_CP013839.1|WP_002992417.1|950162_950804_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NZ_CP013839.1|WP_031488248.1|947528_948302_-|CAMP-factor-pore-forming-toxin-Cfa	unknown	unknown	gnl|CDD|369335
NZ_CP013839.1|WP_031488247.1|948671_949508_-|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270217
NZ_CP013839.1|WP_002989605.1|963509_964130_+|DUF3862-domain-containing-protein	unknown	unknown	gnl|CDD|289729
NZ_CP013839.1|WP_002984447.1|954206_955709_-|pyruvate-kinase	unknown	unknown	gnl|CDD|235619
NZ_CP013839.1|WP_002984444.1|955771_956785_-|6-phosphofructokinase	unknown	unknown	gnl|CDD|235111
NZ_CP013839.1|WP_002984469.1|941023_941272_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170
NZ_CP013839.1|WP_002989626.1|950910_951246_-|alkylphosphonate-utilization-protein	unknown	unknown	gnl|CDD|225380
NZ_CP013839.1|WP_020905236.1|949523_950153_-|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224051
NZ_CP013839.1|WP_002989617.1|960159_960531_+|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224639
NZ_CP013839.1|WP_053039056.1|964386_966651_-|glycogen/starch/alpha-glucan-family-phosphorylase	unknown	unknown	gnl|CDD|340853
NZ_CP013839.1|WP_031488250.1|944481_945804_+|sodium:alanine-symporter-family-protein	unknown	unknown	gnl|CDD|224040
NZ_CP013839.1|WP_031488251.1|941634_943953_-|DNA-helicase-PcrA	unknown	unknown	gnl|CDD|273429
NZ_CP013839.1|WP_002989607.1|962154_962769_-|TVP38/TMEM64-family-protein	unknown	unknown	gnl|CDD|223475
NZ_CP013839.1|WP_063504951.1|956864_959975_-|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl|CDD|180917
NZ_CP013839.1|WP_002984437.1|960530_961229_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP013839.1|WP_031488249.1|945923_947159_+|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl|CDD|223131
NZ_CP013839.1|WP_002984433.1|961238_962024_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013839.1|WP_002984449.1|953431_953989_-|signal-peptidase-I	gnl|CDD|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
NZ_CP013839.1|WP_002984451.1|951441_953256_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl|CDD|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP013839.1|WP_002992417.1|950162_950804_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.99371e-71
NZ_CP013839.1|WP_031488248.1|947528_948302_-|CAMP-factor-pore-forming-toxin-Cfa	gnl|CDD|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	3.90909e-97
NZ_CP013839.1|WP_031488247.1|948671_949508_-|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.49546e-109
NZ_CP013839.1|WP_002984447.1|954206_955709_-|pyruvate-kinase	gnl|CDD|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP013839.1|WP_002984444.1|955771_956785_-|6-phosphofructokinase	gnl|CDD|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_CP013839.1|WP_002984469.1|941023_941272_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
NZ_CP013839.1|WP_002989626.1|950910_951246_-|alkylphosphonate-utilization-protein	gnl|CDD|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
NZ_CP013839.1|WP_020905236.1|949523_950153_-|amino-acid-ABC-transporter-ATP-binding-protein	gnl|CDD|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	6.31636e-109
NZ_CP013839.1|WP_002989617.1|960159_960531_+|GntR-family-transcriptional-regulator	gnl|CDD|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
NZ_CP013839.1|WP_053039056.1|964386_966651_-|glycogen/starch/alpha-glucan-family-phosphorylase	gnl|CDD|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_CP013839.1|WP_031488250.1|944481_945804_+|sodium:alanine-symporter-family-protein	gnl|CDD|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
NZ_CP013839.1|WP_031488251.1|941634_943953_-|DNA-helicase-PcrA	gnl|CDD|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP013839.1|WP_002989607.1|962154_962769_-|TVP38/TMEM64-family-protein	gnl|CDD|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
NZ_CP013839.1|WP_063504951.1|956864_959975_-|DNA-polymerase-III-subunit-alpha	gnl|CDD|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
NZ_CP013839.1|WP_002984437.1|960530_961229_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
NZ_CP013839.1|WP_031488249.1|945923_947159_+|cation-diffusion-facilitator-family-transporter	gnl|CDD|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	3.31574e-95
NZ_CP013839.1|WP_002989605.1|963509_964130_+|DUF3862-domain-containing-protein	gnl|CDD|289729	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862). Structure 3D4E shared structural similarity to beta-lactamase inhibitory proteins (BLIP) which already include 1XXM, 1S0W, 1JTG, 2G2U, 2G2W, 2B5R, and 3due. All of structures are involved in beta-lactamase inhibitor complex. (REF http://www.topsan.org/Proteins/JCSG/3d4e).	6.81674e-87

Protein sequences

>NZ_CP013839.1|WP_002984451.1|951441_953256_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSRESTYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLTTTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>NZ_CP013839.1|WP_002989626.1|950910_951246_-|alkylphosphonate-utilization-protein
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>NZ_CP013839.1|WP_002992417.1|950162_950804_-|amino-acid-ABC-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>NZ_CP013839.1|WP_020905236.1|949523_950153_-|amino-acid-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQNVDAKEKALDLLTRLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>NZ_CP013839.1|WP_031488247.1|948671_949508_-|amino-acid-ABC-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQDKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDALLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQSGKFQAISEKWFGDDVATANIKS
>NZ_CP013839.1|WP_031488248.1|947528_948302_-|CAMP-factor-pore-forming-toxin-Cfa
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTVLMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATINKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKVQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>NZ_CP013839.1|WP_031488249.1|945923_947159_+|cation-diffusion-facilitator-family-transporter
MTQDPIANLKLARKGPIVSIIVYLSLSVAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKNLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHPTHYRIVKM
>NZ_CP013839.1|WP_031488250.1|944481_945804_+|sodium:alanine-symporter-family-protein
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNESVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>NZ_CP013839.1|WP_031488251.1|941634_943953_-|DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSAEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>NZ_CP013839.1|WP_002984469.1|941023_941272_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN
>NZ_CP013839.1|WP_002984449.1|953431_953989_-|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>NZ_CP013839.1|WP_002984447.1|954206_955709_-|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>NZ_CP013839.1|WP_002984444.1|955771_956785_-|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>NZ_CP013839.1|WP_063504951.1|956864_959975_-|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELTDCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQELTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEVNGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKIMDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>NZ_CP013839.1|WP_002989617.1|960159_960531_+|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>NZ_CP013839.1|WP_002984437.1|960530_961229_+|ABC-transporter-ATP-binding-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>NZ_CP013839.1|WP_002984433.1|961238_962024_+|hypothetical-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>NZ_CP013839.1|WP_002989607.1|962154_962769_-|TVP38/TMEM64-family-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>NZ_CP013839.1|WP_002989605.1|963509_964130_+|DUF3862-domain-containing-protein
MTKKHLLTLLLISFFTSFLVACSTTKDKEPQPSDSEIITPRLHQAAHQDKRANFEKIKLATVDSSFTGGTSLEELISLFGEPSQHDPKTAGEVTIDAYTWQFDQVTLTVNLYQNSSIVKTISNFTFARELGLSQKEYQQLQKGMSYEDVKKILTEPDNYSQASSSDHQTLQAIWVSGLKTDTSGANISLVFENNQLTEMSQVGLEE
>NZ_CP013839.1|WP_053039056.1|964386_966651_-|glycogen/starch/alpha-glucan-family-phosphorylase
MTRFTEYVETKLGKSLTQASNEEIYLSLLNFVKEEASHKAKNSAKRKVYYISAEFLIGKLLSNNLINLGIYKDIKEELAAAGKSIAEVEDVELEPSLGNGGLGRLASCFIDSIASLGINGEGVGLNYHCGLFKQVFKHNEQEAEPNYWIEDQSWLVPTNISYDVPFKNFTLKSRLDRIDVLGYKRDTKNYLNLFDIEDVDYGLIKDGISFDKTEIAKNLTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLIIDEAIERGSNLHDLADYAYVQINDTHPSMVIPELIRLLTEKHGFDFDEAVAVVKNMVGYTNHTILAEALEKWPTAYLNEVVPHLVTIIEKLDALVRSEVSDPAVQIIDESGRVHMAHMDIHFATSVNGVAALHTEILKNSELKAFYDLYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLMAFADDKAVHAKLAEIKFNNKLALKRYLKDNKDIELDEHSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKKGNLPKRKITVIFGGKAAPAYIIAQDIIHLILCLSELINNDPEVSPYLNVHLVENYNVTVAEHLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIAELAGMENIYTFGKDSDTIINLYATASYVAKDYYDNHPAIKAAVNFIISPELLAFGNEECLDRLYKELISKDWFMTLIDLEEYIEVKEKMLADYEDQDLWMTKVVHNIAKAGFFSSDRTIEQYNEDIWHSR

Crispr_ID: NZ_CP013839_4

• CRISPR_ID: NZ_CP013839_4
• CRISPR_location: 1147958-1148191
• CRISPR_type: TypeI
• Repeat_type: I-C
• Spacer_info: 3 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5,cas3

Consensus repeat of NZ_CP013839_4

Consensus_repeat	Method
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRISPRCasFinder
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRT
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	PILER-CR

spacers of NZ_CP013839_4

>4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT
GTATTTGACATAGTCCAGAGTGTCAGTCACATAGT
>4.2|1148061|31|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR
TATATCGTGGCAGATATCCCCATAATAGTCA
>4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR
CCTGTGCCTTTGATTTTTAGGATAGGTTTAGC

CRISPR arrays and Neighbor proteins around NZ_CP013839_4

CRISPR arrays

The CRISPR arrays of NZ_CP013839_4

>merge|NZ_CP013839|4|1147958-1148191|CRISPRCasFinder,CRT,PILER-CR
ATCTTTCAATCCACTCACCCATGAAGGGTGAGACGTATTTGACATAGTCCAGAGTGTCAGTCACATAGTTTATTTCAATCCACTCACCCATGAAGGGTGAGACTATATCGTGGCAGATATCCCCATAATAGTCATTATTTCAATCCACTCACCCATGAAGGGTGAGACCCTGTGCCTTTGATTTTTAGGATAGGTTTAGCTTATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NZ_CP013839|4|4|1147958-1148191|CRISPRCasFinder
ATCTTTCAATCCACTCACCCATGAAGGGTGAGAC	GTATTTGACATAGTCCAGAGTGTCAGTCACATAGT
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	TATATCGTGGCAGATATCCCCATAATAGTCA
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	CCTGTGCCTTTGATTTTTAGGATAGGTTTAGC
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NZ_CP013839|4|2|1147958-1148191|CRT
ATCTTTCAATCCACTCACCCATGAAGGGTGAGAC	GTATTTGACATAGTCCAGAGTGTCAGTCACATAGT
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	TATATCGTGGCAGATATCCCCATAATAGTCA
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	CCTGTGCCTTTGATTTTTAGGATAGGTTTAGC
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NZ_CP013839|4|2|1148027-1148191|PILER-CR
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	TATATCGTGGCAGATATCCCCATAATAGTCA
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC	CCTGTGCCTTTGATTTTTAGGATAGGTTTAGC
TTATTTCAATCCACTCACCCATGAAGGGTGAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013839.1|WP_002989022.1|1159162_1159726_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|379082
NZ_CP013839.1|WP_002989018.1|1160326_1160722_-|hypothetical-protein	unknown	unknown	gnl|CDD|181104
NZ_CP013839.1|WP_031488519.1|1149665_1150340_-|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl|CDD|224385
NZ_CP013839.1|WP_002983795.1|1139403_1140084_-|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_CP013839.1|WP_031488522.1|1147089_1147800_-|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	unknown	unknown	gnl|CDD|223856
NZ_CP013839.1|WP_031488521.1|1148339_1148633_-|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|224262
NZ_CP013839.1|WP_031488520.1|1148643_1149669_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NZ_CP013839.1|WP_002983792.1|1140225_1140699_+|arginine-repressor	unknown	unknown	gnl|CDD|224355
NZ_CP013839.1|WP_031488526.1|1141594_1142674_-|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl|CDD|225197
NZ_CP013839.1|WP_002983778.1|1146453_1147077_-|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl|CDD|239264
NZ_CP013839.1|WP_031488518.1|1150341_1151190_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl|CDD|226175
NZ_CP013839.1|WP_031488523.1|1145304_1146411_-|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl|CDD|184456
NZ_CP013839.1|WP_031488516.1|1153950_1156359_-|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NZ_CP013839.1|WP_002983803.1|1137894_1139130_-|arginine-deiminase	unknown	unknown	gnl|CDD|234949
NZ_CP013839.1|WP_031488527.1|1140864_1141581_-|B3/4-domain-containing-protein	unknown	unknown	gnl|CDD|225917
NZ_CP013839.1|WP_031488515.1|1156512_1159161_-|valine--tRNA-ligase	unknown	unknown	gnl|CDD|235582
NZ_CP013839.1|WP_010922512.1|1153089_1153818_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|273847
NZ_CP013839.1|WP_063504953.1|1144476_1145217_-|response-regulator	unknown	unknown	gnl|CDD|227095
NZ_CP013839.1|WP_031488517.1|1151194_1153090_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl|CDD|273839
NZ_CP013839.1|WP_031488525.1|1142746_1144480_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP013839.1|WP_031488518.1|1150341_1151190_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	1e-148	488.9	0.4
NZ_CP013839.1|WP_031488519.1|1149665_1150340_-|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	4.1e-35	116.3	1.2
NZ_CP013839.1|WP_031488521.1|1148339_1148633_-|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	6.2e-34	111.0	0.0
NZ_CP013839.1|WP_031488520.1|1148643_1149669_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	1.1e-148	489.5	0.0
NZ_CP013839.1|WP_010922512.1|1153089_1153818_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	4e-59	194.5	0.0
NZ_CP013839.1|WP_031488517.1|1151194_1153090_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	2.5e-169	559.2	1.6
NZ_CP013839.1|WP_031488516.1|1153950_1156359_-|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	4.8e-151	499.2	12.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013839.1|WP_002989022.1|1159162_1159726_-|AAA-family-ATPase	gnl|CDD|379082	pfam13238, AAA_18, AAA domain.	0.00400512
NZ_CP013839.1|WP_002989018.1|1160326_1160722_-|hypothetical-protein	gnl|CDD|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	0.000151325
NZ_CP013839.1|WP_031488519.1|1149665_1150340_-|CRISPR-associated-protein-Cas4	gnl|CDD|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	9.34311e-43
NZ_CP013839.1|WP_002983795.1|1139403_1140084_-|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.46736e-40
NZ_CP013839.1|WP_031488522.1|1147089_1147800_-|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	gnl|CDD|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	1.11912e-42
NZ_CP013839.1|WP_031488521.1|1148339_1148633_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	7.88939e-35
NZ_CP013839.1|WP_031488520.1|1148643_1149669_-|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP013839.1|WP_002983792.1|1140225_1140699_+|arginine-repressor	gnl|CDD|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.23847e-66
NZ_CP013839.1|WP_031488526.1|1141594_1142674_-|MmcQ/YjbR-family-DNA-binding-protein	gnl|CDD|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	2.64733e-36
NZ_CP013839.1|WP_002983778.1|1146453_1147077_-|TlpA-family-protein-disulfide-reductase	gnl|CDD|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.89498e-35
NZ_CP013839.1|WP_031488518.1|1150341_1151190_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	4.74456e-161
NZ_CP013839.1|WP_031488523.1|1145304_1146411_-|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl|CDD|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	5.99326e-164
NZ_CP013839.1|WP_031488516.1|1153950_1156359_-|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.29598e-159
NZ_CP013839.1|WP_002983803.1|1137894_1139130_-|arginine-deiminase	gnl|CDD|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NZ_CP013839.1|WP_031488527.1|1140864_1141581_-|B3/4-domain-containing-protein	gnl|CDD|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	8.38431e-106
NZ_CP013839.1|WP_031488515.1|1156512_1159161_-|valine--tRNA-ligase	gnl|CDD|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP013839.1|WP_010922512.1|1153089_1153818_-|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.32713e-117
NZ_CP013839.1|WP_063504953.1|1144476_1145217_-|response-regulator	gnl|CDD|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	5.08855e-82
NZ_CP013839.1|WP_031488517.1|1151194_1153090_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl|CDD|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
NZ_CP013839.1|WP_031488525.1|1142746_1144480_-|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.59577e-66

Protein sequences

>NZ_CP013839.1|WP_031488522.1|1147089_1147800_-|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNIFYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>NZ_CP013839.1|WP_002983778.1|1146453_1147077_-|TlpA-family-protein-disulfide-reductase
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>NZ_CP013839.1|WP_031488523.1|1145304_1146411_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MEHKWKLWLFIVGVVFLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKVIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSAAEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVIRYKEDKSFNMTRTEVRSRSGDSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>NZ_CP013839.1|WP_063504953.1|1144476_1145217_-|response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKQESPPTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLIQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLIGVTPSQYKKGDQA
>NZ_CP013839.1|WP_031488525.1|1142746_1144480_-|sensor-histidine-kinase
MKRYPLLVQLISYIFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNSQLIMKTSSDMMAEPWYKAAIDRQAMPILTPARQLSLSSKKEWVVSVTQEVVDAAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIKNGYAKDKSSFVYQRVIPNSQWTLIGVASLDQLHRVQRQIFWSFLGMGLLACLICGLTTILVLRKWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYDVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLMLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDHFTEIQLTLPKMHELMADDTQENE
>NZ_CP013839.1|WP_031488526.1|1141594_1142674_-|MmcQ/YjbR-family-DNA-binding-protein
MSLASDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLGRLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKAFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYVCQVLETNIPNEGYRKNPNIDKLMRLRKRQQYKDGLLSFDLMKEHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>NZ_CP013839.1|WP_031488527.1|1140864_1141581_-|B3/4-domain-containing-protein
MVEFVADQSFWELFPDAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPVGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALDFIEGSAKMYLHAITSVHVLDKDNPHVLLFTEN
>NZ_CP013839.1|WP_002983792.1|1140225_1140699_+|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATICGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>NZ_CP013839.1|WP_002983795.1|1139403_1140084_-|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>NZ_CP013839.1|WP_002983803.1|1137894_1139130_-|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI
>NZ_CP013839.1|WP_031488521.1|1148339_1148633_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETPAGRKRLRHVAKLCVNYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>NZ_CP013839.1|WP_031488520.1|1148643_1149669_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILMTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>NZ_CP013839.1|WP_031488519.1|1149665_1150340_-|CRISPR-associated-protein-Cas4
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQILHTKADNPYIKEKRKDLLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>NZ_CP013839.1|WP_031488518.1|1150341_1151190_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKPIFVQANERIEDDFRSLERRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTVEILEGL
>NZ_CP013839.1|WP_031488517.1|1151194_1153090_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRSNESVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFAYYSAEMGQTQYDSFHKQLNNWIDYCEEGDVKRFLTIVQQFILKPEFLTLILDSLIGPDYQNNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKTLHQSYISFVEANREKLGICNISGREEQLTDKHRGLMGNTKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMLKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYHKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>NZ_CP013839.1|WP_010922512.1|1153089_1153818_-|type-I-C-CRISPR-associated-protein-Cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>NZ_CP013839.1|WP_031488516.1|1153950_1156359_-|CRISPR-associated-helicase/endonuclease-Cas3
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWNYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSIVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGMSHFLSAEDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>NZ_CP013839.1|WP_031488515.1|1156512_1159161_-|valine--tRNA-ligase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKCVHSVGHSERSGAAVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTAVYPTVTPTFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>NZ_CP013839.1|WP_002989022.1|1159162_1159726_-|AAA-family-ATPase
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTQLTAAETAQLIIQKMTHIKEN
>NZ_CP013839.1|WP_002989018.1|1160326_1160722_-|hypothetical-protein
MAKQKNRKKALKLEMKRNGLLKKAGQVFDKAVESVETAVDKTISAGKNLVEKGSQTVENLTASKERLTLDEFAGQPVVAGIRSDLVETLYAEGIHSAQAFKEWTEKDLLALKGIGPATVKKLVENGASFKK

Crispr_ID: NZ_CP013839_5

• CRISPR_ID: NZ_CP013839_5
• CRISPR_location: 1542363-1542617
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP013839_5

Consensus_repeat	Method
TGGAGTTTCTGGGGCTGCTGGAGTTGATGGAGATGGGGTTTCCT	PILER-CR

spacers of NZ_CP013839_5

>5.1|1542407|64|NZ_CP013839|PILER-CR
CAGAAGGAGCTGCTACTGAAGGTTCCTCAGGAGTTTCTGGAGCCGCTGGAGTTTCTGGAGCCGC
>5.2|1542515|64|NZ_CP013839|PILER-CR
CAGAAGGAGCTGCTACTGAAGGTTCCTCAGGAGTTTCTGGAGCCGCTGGAGTTTCTGGAGCCGC

CRISPR arrays and Neighbor proteins around NZ_CP013839_5

CRISPR arrays

The CRISPR arrays of NZ_CP013839_5

>merge|NZ_CP013839|5|1542363-1542617|PILER-CR
TTTCTGGGGCTGCTGGAGTTGATGGAGATGGGGTTTCCTCAGAAGGAGCTGCTACTGAAGGTTCCTCAGGAGTTTCTGGAGCCGCTGGAGTTTCTGGAGCCGCTGGAGTTTCTGGGGCTGCTGGAGTTGATGGAGATGGGGTTTCCTCAGAAGGAGCTGCTACTGAAGGTTCCTCAGGAGTTTCTGGAGCCGCTGGAGTTTCTGGAGCCGCTGGAGTTTCTGGGGCTGCTGGAGTTGATGGAGATGGGGTTTCTG

>NZ_CP013839|5|3|1542363-1542617|PILER-CR
TTTCTGGGGCTGCTGGAGTTGATGGAGATGGGGTTTCCTCAGAA	GGAGCTGCTACTGAAGGTTCCTCAGGAGTTTCTGGAGCCGCTGGAGTTTCTGGAGCCGCTGGAG
TTTCTGGGGCTGCTGGAGTTGATGGAGATGGGGTTTCCTCAGAA	GGAGCTGCTACTGAAGGTTCCTCAGGAGTTTCTGGAGCCGCTGGAGTTTCTGGAGCCGCTGGAG
TTTCTGGGGCTGCTGGAGTTGATGGAGATGGGGTTTCTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013839.1|WP_002982520.1|1535592_1536414_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NZ_CP013839.1|WP_063504957.1|1543209_1546707_-|C5a-peptidase-ScpA/B	unknown	unknown	gnl|CDD|173801
NZ_CP013839.1|WP_031488606.1|1532474_1532699_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP013839.1|WP_023610772.1|1553746_1555375_-|CHAP-domain-containing-protein	unknown	unknown	gnl|CDD|226451
NZ_CP013839.1|WP_031488612.1|1547041_1548148_-|M-related-protein-Enn	unknown	unknown	gnl|CDD|224117
NZ_CP013839.1|WP_002982466.1|1555476_1556865_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP013839.1|WP_031488609.1|1538287_1540759_-|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl|CDD|273578
NZ_CP013839.1|WP_031488614.1|1549685_1550963_-|M-related-protein-Mrp	unknown	unknown	gnl|CDD|224117
NZ_CP013839.1|WP_031488607.1|1532877_1534506_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173883
NZ_CP013839.1|WP_002982485.1|1540771_1541692_-|metal-ABC-transporter-substrate-binding-lipoprotein/laminin-binding-adhesin-Lmb	unknown	unknown	gnl|CDD|238499
NZ_CP013839.1|WP_031488608.1|1534618_1535596_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NZ_CP013839.1|WP_031488605.1|1531447_1532149_+|exotoxin	unknown	unknown	gnl|CDD|280949
NZ_CP013839.1|WP_002982507.1|1537918_1538119_-|CsbD-family-protein	unknown	unknown	gnl|CDD|225777
NZ_CP013839.1|WP_003059481.1|1536425_1537229_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223521
NZ_CP013839.1|WP_031577371.1|1548357_1549461_-|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl|CDD|224117
NZ_CP013839.1|WP_003056043.1|1553417_1553669_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP013839.1|WP_002991237.1|1556861_1557515_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP013839.1|WP_002993552.1|1557608_1558826_-|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|182528
NZ_CP013839.1|WP_023610725.1|1551149_1552742_-|trans-acting-positive-regulator	unknown	unknown	gnl|CDD|285470
NZ_CP013839.1|WP_011529053.1|1537212_1537839_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224049

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP013839.1|WP_002982520.1|1535592_1536414_+|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.11383e-69
NZ_CP013839.1|WP_063504957.1|1543209_1546707_-|C5a-peptidase-ScpA/B	gnl|CDD|173801	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	3.39335e-76
NZ_CP013839.1|WP_023610772.1|1553746_1555375_-|CHAP-domain-containing-protein	gnl|CDD|226451	COG3942, COG3942, Surface antigen [General function prediction only].	8.59398e-59
NZ_CP013839.1|WP_031488612.1|1547041_1548148_-|M-related-protein-Enn	gnl|CDD|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	1.30215e-10
NZ_CP013839.1|WP_002982466.1|1555476_1556865_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.2074e-30
NZ_CP013839.1|WP_031488609.1|1538287_1540759_-|pneumococcal-type-histidine-triad-protein	gnl|CDD|273578	TIGR01363, pneumococcal_histidine_triad_A_protein, streptococcal histidine triad protein. This model represents the N-terminal half of a family of Streptococcal proteins that contain a signal peptide and then up to five repeats of a region that includes a His-X-X-His-X-His (histidine triad) motif. Three repeats are found in the seed alignment. Additional copies in more poorly conserved regions may be detected. Members of this family from Streptococcus pneumoniae are suggested to cleave human C3, and the member PhpA has been shown in vaccine studies to be a protective antigen in mice. [Cellular processes, Pathogenesis].	0
NZ_CP013839.1|WP_031488614.1|1549685_1550963_-|M-related-protein-Mrp	gnl|CDD|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	2.97837e-18
NZ_CP013839.1|WP_031488607.1|1532877_1534506_+|ABC-transporter-substrate-binding-protein	gnl|CDD|173883	cd08518, PBP2_NikA_DppA_OppA_like_19, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP013839.1|WP_002982485.1|1540771_1541692_-|metal-ABC-transporter-substrate-binding-lipoprotein/laminin-binding-adhesin-Lmb	gnl|CDD|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	4.72316e-122
NZ_CP013839.1|WP_031488608.1|1534618_1535596_+|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	9.72827e-107
NZ_CP013839.1|WP_031488605.1|1531447_1532149_+|exotoxin	gnl|CDD|280949	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain.	8.77124e-42
NZ_CP013839.1|WP_002982507.1|1537918_1538119_-|CsbD-family-protein	gnl|CDD|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	7.43573e-06
NZ_CP013839.1|WP_003059481.1|1536425_1537229_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.85753e-80
NZ_CP013839.1|WP_031577371.1|1548357_1549461_-|YSIRK-type-signal-peptide-containing-protein	gnl|CDD|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	6.26961e-12
NZ_CP013839.1|WP_002991237.1|1556861_1557515_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.27645e-69
NZ_CP013839.1|WP_002993552.1|1557608_1558826_-|FtsX-like-permease-family-protein	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	5.49497e-52
NZ_CP013839.1|WP_023610725.1|1551149_1552742_-|trans-acting-positive-regulator	gnl|CDD|285470	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This corresponds to the PRD like region.	1.70009e-53
NZ_CP013839.1|WP_011529053.1|1537212_1537839_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.46127e-91

Protein sequences

>NZ_CP013839.1|WP_002982485.1|1540771_1541692_-|metal-ABC-transporter-substrate-binding-lipoprotein/laminin-binding-adhesin-Lmb
MKKGFFLMAMAVSLVMIAGCDKSANPKQPTQGMSVVTSFYPMYAMTKEVSGDLNDVRMIQSGAGIHSFEPSVNDVAAIYDADLFVYHSHTLEAWARDLDPNLKKSKVDVFEASKPLTLDRVKGLEDMEVTQGIDPATLYDPHTWTDPVLAGEEAVNIAKELGRLDPKHKDSYTKKAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSPLEAAPSGNKTYLENLRANLEVLYQQLK
>NZ_CP013839.1|WP_031488609.1|1538287_1540759_-|pneumococcal-type-histidine-triad-protein
MKKTYGYIGSVAAILLATHIGSYQLGKHHMGPATKDNQIAYIDDSKGKAKAPKTNKTMDQISAEEGISAEQIVVKITDQGYVTSHGDHYHFYNGKVPYDAIISEELLMTDPNYRFKQSDVINEILDGYVIKVNGNYYVYLKPGSKRKNIRTKQQIAEQVAKGTKEAKEKGLAQVAHLSKEEVAAVNEAKRQGRYTTDDGYIFSPTDIIDDLGDAYLVPHGNHYHYIPKKDLSPSELAAAQAYWSQKQGRGARPSDYRPTPAPGRRKAPIPDVTPNPGQGHQPDNGGYHPAPPRPNDASQNKHQRDEFKGKTFKELLDQLHRLDLKYRHVEEDGLIFEPTQVIKSNAFGYVVPHGDHYHIIPRSQLSPLEMELADRYLAGQTEDNDSGSDHSKPSDKEVTHTFLGHRIKAYGKGLDGKPYDTSDAYVFSKESIHSVDKSGVTAKHGDHFHYIGFGELEQYELDEVANWVKAKGQADELAAALDQEQGKEKPLFDTKKVSRKVTKDGKVGYMMSKDGKDYFYARDQLDLTQIAFAEQELMLKDKKHYRYDIVDTGIEPRLAVDVSSLPMHAGNATYDTGSSFVIPHIDHIHVVPYSWLTRDQIATIKYVMQHPEVRPDVWSKPGHEESGSVIPNVTPLDKRAGMPNWQIIHSAEEVQKALAEGRFATPDGYIFDPRDVLAKETFVWKDGSFSIPRADGSSLRTINKSDLSQAEWQQAQELLAKKNAGDATDTDKPKEKQQADKSNENQQPSEASKEEEKESDDFIDSLPDYGLDRATLEDHINQLAQKANIDPKYLIFQPEGVQFYNKNGELVTYDIKTLQQINP
>NZ_CP013839.1|WP_002982507.1|1537918_1538119_-|CsbD-family-protein
MSEEKLKSKIEQASGGLKEGAGKLTGDKELEAKGFVEKTIAKGKELADDAKEAVEGAVDAVKEKLK
>NZ_CP013839.1|WP_011529053.1|1537212_1537839_+|ABC-transporter-ATP-binding-protein
MTLEAKKLGFYHKKDQWLFKEIDLEVAPGQILGIFGQSGCGKTSLSRVLAGFLQPKSGEVLVDGSHLPNKAFRPVQLIQQHPEQTMNPLWPMKKSLEEAYYPSQDLRDAFGIQEKWLKRRPSELSGGELQRFSIVRSLHPETKYLIADEMTTMLDSITQASVWKSLLEIVKDRNLGLIIISHDFDMLEKLCDACYMIEENRTQLFKHT
>NZ_CP013839.1|WP_003059481.1|1536425_1537229_+|ABC-transporter-ATP-binding-protein
MTETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEVKKGELLAIIGASGSGKSLLAHAIMDILPKNAAVTGDMIYRGQSLTSKRIKQLRGKEMTLIPQSVNYLDPSMKVKHQVRLGISENAKATQEGLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTCISDTVSLIIADEPTPGLHPDALQMVLDQLRSFADKGISVIFITHDIVAASQIADRITIFKEGKAIETAPASFFSGGGEQLQTEFARRLWRTLPQQDFLKGVTHDLRG
>NZ_CP013839.1|WP_002982520.1|1535592_1536414_+|ABC-transporter-permease
MILKRRTMVLWQLGIAISLILSILALNLYFYRTPLETNAALRNLAPSLNHLFGTDGLGRDMFVRTIKGLYFSLQVGLLGALMGVFLATVFGVLAGLGNSLIDKIIAWLVDLFIGMPHLIFMILISFVVGKGAQGVIIATAVTHWPSLARLIRNEVYDLKNKAFVQLSKSMGKTPYYIVRHHILPLIASQIFIGFILLFPHVILHEASMTFLGFGLSAEQPSVGIILSEAAKHISLGNWWLVIFPGLYLILVVNAFDTIGESLKKLFYPQTDHF
>NZ_CP013839.1|WP_031488608.1|1534618_1535596_+|ABC-transporter-permease
MKRTTIIIIWKIIRCVTLIFGVSVLTFVLLKQSPVDPVMASVNYDTSLTPAQYKAIAHHYGLDKPALVQYFIWLKNVIQGHLGTSLVYRQPVSDIIRSRAGASFILMGLSWILSGLIGFILGTLSAFHQGKLLDRVIRWFSYLQISVPTFWIGLIFLLIFSVQLGWFPIGISSPIGTLSQDITLADRIKHLMLPVFTLSILGIANVTLHTRTKMMSVLSSEYVLFARARGETQWQIFKHHCLRNAIVPAITLHFSYFGELFGGSVLAEQVFSYPGLGSTLTEAGLKSDTPLLLAIVMIGTLFVFAGNFIADILNSIINPQLRRKV
>NZ_CP013839.1|WP_031488607.1|1532877_1534506_+|ABC-transporter-substrate-binding-protein
MSKYLKYFSIITLFLTGLILVACQQQKPQTKERQRKQRPKDELVVSMGAKLPHEFDPKDRYGVHNEGNITHSTLLKRSPELDIKGELAKTYHLSEDGLTWSFDLHDDFKFSNGEPVTADDVKFTYDMLKADGKAWDLTFIKNVEVVGKNQVNIHLTEAHSTFTAQLTEIPIVPKKHYNDKYKSNPIGSGPYMVKEYKAGEQAIFVRNPYWHGKKPYFKKWTWVLLDENTALAALESGDVDMIYATPELADKKVKGTRLLDIPSNDVRGLSLPYVKKGVITDSPDGYPVGNDVTSDPAIRKALTIGLNRQKVLDTVLNGYGKPAYSIIDKTPFWNPKTAIKDNKVAKAKQLLTKAGWKEQADGSRKKGDLDAAFDLYYPTNDQLRANLAVEVAEQAKALGITIKLKASNWDEMATKSHDSALLYAGGRHHAQQFYESHHPSLAGKGWTNITFYNNPTVTKYLDKAMTSSDLDKANEYWKLAQWDGKTGASTLGDLPNVWLVSLNHTYIGDKRINVGKQGIHSHGHDWSLLTNIAEWTWDESTK
>NZ_CP013839.1|WP_031488606.1|1532474_1532699_-|hypothetical-protein
MTYFRLKKELNWSLRDKGMVVYEGNQKLQIAINTGKNNSEKVFFDTFFEVVRAAATFSTAKNICFGLGLLRSQK
>NZ_CP013839.1|WP_031488605.1|1531447_1532149_+|exotoxin
MKKTKLIFSLTSIFIAIISRPVFGLEVDNNSLLRNIYSTIMYEYSDTVIDFKTSHNLVTKKLDVRDARDFFINSEMDEYAANDFKAGDKIAVFSVPFDWNYLSEGKVIAYTYGGITPYQKTSIPKNIPVNLWINGKQISVPYNEISTNKTTVTAQEIDLKVRKFLIAQHQLYSSGSSYKSGKLVFHTNDNSDKYSLDLFYVGYRDKESIFKVYKDNKSFNIDKIGHLDIEIDS
>NZ_CP013839.1|WP_063504957.1|1543209_1546707_-|C5a-peptidase-ScpA/B
MRKKQKLPFDKLAIALMSTSILLNAQSDIKANTVTEDTPATEQAVETPQPTAVSEEAPSSSKETNPPQIPDDAEETVADKANDPAPQAPAKTADTPVTSKATIRDLNDPSQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLTDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDGKTAVDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAVNLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETATVKTADKQDKEMPVLSTNRFEPNKAYDYAYANRGMKEDDFKDVKGKIALIERGDIDFKDKIANAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKDNPKKTITFNATPKVLPTASGTKLSRFSSWGLTADGNIKPDIAAPGQDILSSVANNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAATMYVTDKDNTSSKVHLNNVSDTFEVTVTVHNKSDKPQELYYQATVQTDKVDGKHFALAPKALYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRGDFGNLSALEKPIYDSKDGSSYYHEANSDAKDQLDGDGLQFYALKNNFTALTTESNPWTIIKAVKEGVENIEDIESSEITETIFAGTFAKQDDDSHYYIHRHANGKPYAAISPNGDGNRDYVQFQGTFLRNAKNLVAEVLDKEGNVVWTSEVTEQVVKNYNNDLASTLGSTRFEKTRWDGKDKDGKVVANGTYTYRVRYTPISSGAKEQHTDFDVIVDNTTPEVATSATFSTEDRRLTLASKPKTSQPVYRERIAYTYMDEDLPTTEYISPNEDGTFTLPEEAETMEGATVPLKMSDFTYVVEDMAGNITYTPVTKLLEGHSNKPEQDGSDQAPDKKPETKPEQDGSGQAPDKKPEAKPEQDGSGQTPDKKPETKPEKDSSGQTPGKTPQKGQPSRTLEKRSSKRALATKASTRDQLPTTNDKDTNRLHLLKLVMTTFFLGLVAHIFKTKRTED
>NZ_CP013839.1|WP_031488612.1|1547041_1548148_-|M-related-protein-Enn
MARQQTKKNYSLRKLKTGTASVAVALTVLGAGFANQTEVRAEGVKATTNLPEEAKYAALKDENTGLRGDQTKLVKKLEEEQEKSKNLEKQKQELENQALNFQDVIETQEKEKEDLKTTLAKATKENEISEASRKGLSRDLEASRAAKKELEAKHQKLEAENKKLTEANQVSEASRKGLSNDLEASRAAKKELEAKYQKLETDHQALEAKHQKLETDYQVSETSRKGLSRDLEASREANKKVTSELTQAKAQLAALEESKKLSEKEKAELQAKLDAQGKALKEQLAKQTEELAKLRAEKAAGSKTPATKPANKERSGRAAQTATRPSQNKGMRSQLPSTGEAANPFFTAAAATVMVSAGMLALKRKEEN
>NZ_CP013839.1|WP_031577371.1|1548357_1549461_-|YSIRK-type-signal-peptide-containing-protein
MARKDTNKQYSLRKLKTGTASVAVAVAVLGAGFANQTTVKADSDNINRSVSVKDNEKELHNKIADLEEERGEHLDKIDELKEELKAKEKSSENVERHYLRKLDQEYKEQQERQKNLEELERQSQREVEKRYQEQLQKQQQLETEKQISEASRKSLSRDLEASRAAKKDLEAEHQKLKEEKQISDASRQGLSRDLEASREAKKKVEADLAALTAEHQKLKEEKQISDASRQGLSRDLEASREAKKKVEADLAEANSKLQALEKLNKELEEGKKLSEKEKAELQAKLEAEAKALKEQLAKQAEELAKLKGNQTPNAKVAPQANRSRSAMTQQKRTLPSTGETANPFFTAAAATVMVSAGMLALKRKEEN
>NZ_CP013839.1|WP_031488614.1|1549685_1550963_-|M-related-protein-Mrp
MSKRNPNKHYSLRKLKTGTASVAVALTVLGTGLANTTDVKAETVGRFSDEQVRKAREKAIEDVFDGYTGARSVYQSGNLPNRLTPTKLSKLMQQMYKETLQKKEELDTLSKALTHTIEKKIESENAYKKELGQLKAAAEAEAQKALDALNNKNKQISDLTNENAQLKEAIEGYVQTIQNASREIAAKQQELAAAKSQLEAKNAEIEALKQQDASKTEEIAKLQSEAATLENLLGSAKRELTELQAKLDTATAEKAKLESQVTTLENLLGSAKRELTDLQAKLDAANAEKEKLQSQAAALEKQLEATKKELADLQAKLAATNQEKEKLEAEAKALKEQLAKQAEELAKLKADKASGAQKPDTKPGNKEVPTRPSQTRTNTNKAPMAQTKRQLPSTGEETTNPFFTAAALTVIASAGVLALKRKEEN
>NZ_CP013839.1|WP_023610725.1|1551149_1552742_-|trans-acting-positive-regulator
MHVSKLFTSQQWRELKLISYLTENSNAIGVKDKELSKALNISMLTLQSCLTNMQFMKEVGGITYKDGYINIWYHQCCGLQEVYQKALRESPSLKLLELLFFRDFSSLEELAEELFVSLSTLKRLIKKTNTYLSHTFAISIVTSPVQVSGDERQIRLFYLKYFSEAYKISEWPFGDILNLKDCERLLSLLIKEVDVKVHFTLFQHLKILSGVNLIRYYKGYSCSYNNKKTSHRFSQLIQHSSEIQDLSRLFYLKFGLHLDEYTIAEMFSNHLNDKLEIGCAFEIINQDPTSGGRQVTNWIHLLDEMEIKLNLSITNKYEVAVTLHNASVLNEEDITANYLLFDYKKSYLNFYQKEHPRIYEAFVTSVEKLMQADNAQVSKELINQLTYCFFITWENSFLKVNQRDEKVRLLVIERSYNSVGNFLKKYIGEFFSITNFDELDCLTIDLVEIEKQYDVIVTDVMVGKSEELEIFFFYKMIPEAIIDRLNEFLNVSFTDNNVMVKNLEAPSPSKSHSDKEVQKPDNSVKQATSS
>NZ_CP013839.1|WP_003056043.1|1553417_1553669_-|hypothetical-protein
MIKKVTTPSQKIKKRVRNGYLLKLGTACLLLSILSYGIGLLGQPSMENTFMGIASVAMLGSVCFFIIFALNRIFDALEDNLRD
>NZ_CP013839.1|WP_023610772.1|1553746_1555375_-|CHAP-domain-containing-protein
MKKRKLLAVTLLSTILLNSAVPLVVADTSLRNNTSSTDQPTTADTDTDDESETAKKDKKSKETASQHDTQKDHKSSHTHPTPPSNDTKQTDQASSEATDKPNKDKNDTKQPDSSDQSTPSPKDQSSQKESQNKDGRPTPSPDQQKDQTPDKTPEKSADKTPEKGPEKATEKTPEPNRDAPKPIQPPLAAAAPVFAPWRESDKDLSKLKPSSRSSAAYVRHWTGDSAYTHNLLSRRYGITAEQLDGFLNSLGIHYDKERLNGKRLLEWEKLTGLDVRAIVAIAMAESSLGTQGVAKEKGANMFGYGAFDFNPNNAKKYSDEVAIRHMVEDTIIANKNQTFERQDLKAKKWSLGQLDTLIDGGVYFTDTSGSGQRRADIMTKLDQWIDDHGSTPEIPEHLKITSGTQFSEVPVGYKRSQPQNVLTYKSETYSFGQCTWYAYNRVKELGYQVDRYMGNGGDWQRKPGFVTTHKPKVGYVVSFAPGQAGADATYGHVAVVEQIKEDGSILISESNVMGLGTISYRTFTAEQASLLTYVVGDKLPRP
>NZ_CP013839.1|WP_002982466.1|1555476_1556865_-|HAMP-domain-containing-histidine-kinase
MRLIKKTFLVINGLIIVVVTSILLVLYFAMPIYYTKVKDKEVKREFDQTSKQIKGKTVTEIRDILTKKINKDNIWYSLVDSDNQLLYPSLQLLDGVSESKDSQNVNIVTTFDNSYSNVKVMSQKVTLRDGKKMTLLGQSSLQPVTDASKVLLDLYPSLLIFSVTVGSIVAYLYSRTSSRRILSMSQTAKKMVNLEPNLTCTIHGKDEIAMLASDINRLYASLSTSIKSLQKEYEKASDSEREKSEFLRMTSHELKTPITSVIGMIDGMLYNVGDFADRDKYLRKCRDVLEGQAQLVQSILSLSKIETLASQNQELFSLKSSLEEEMEVFLVLSELKHLKVTINLEEQFVKANKVYLLKAIKNIIDNAFHYTKSGGQVMIQLKDNQLVIKNEAETLLTQQQMKQLFQPFYRPDYSRNRKDGGTGLGLFITHQILDQHHLAYRFVVLDQRWMVFTIDFPSHHDD
>NZ_CP013839.1|WP_002991237.1|1556861_1557515_-|response-regulator-transcription-factor
MFKILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLIILDIMLPSLSGLEVLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVTKPFSPLILIKRIENVLRVSTPDEKRQIGDLLVDETEHSVYWQGTLVKLTKKEYDIIDYLAKRHQKIVTRDQLMDDIWGYSELDTRVLDNHIKNLRKKMTGIPLKTITGMGYLLGERE
>NZ_CP013839.1|WP_002993552.1|1557608_1558826_-|FtsX-like-permease-family-protein
MEDIIAALSSILSHKMRSILTMLGIIIGIGAIIAIFSIIEGNTENTKRQLIGGSNNTINIVFNKKSSIDPKFPDKSNAKKPDYLPFMAEEELSKIQQVKGVKNALISYGIDDKVYHLGQKSSAKISAITKNVAEVRRMTFIKGSDFSDKDFIDQKQVIYLEKSLYESLFPKDDGLGKFVEVMGNPFRVIGVFESKEQSGLTSGTEKIAYIPLHQWYNINGVVDATPEITIQTYRADDLKPVAKRVSDMLNQTIPKSDYMFGVMNLKEFERQLDNLNKSNFVLLAGIASISLIVGGIGVMNIMLVSVTERTREIGIKKALGARRKLILKQFLIEAVILTLLGGVIGVISGMVSGLIITRSLEYPYILSLFSVVLSLAFCCIIGIVFGLLPAIKASKLDPIEALRFE

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013839_2	2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	756974-757003	30	MK448798	Streptococcus phage Javan533, complete genome	15885-15914	0	1.0
NZ_CP013839_2	2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	756974-757003	30	NC_028700	Streptococcus phage T12, complete genome	15734-15763	0	1.0
NZ_CP013839_2	2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	756974-757003	30	MK448790	Streptococcus phage Javan515, complete genome	15558-15587	0	1.0
NZ_CP013839_2	2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	756974-757003	30	MK448783	Streptococcus phage Javan503, complete genome	14868-14897	0	1.0
NZ_CP013839_2	2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	756974-757003	30	MK448967	Streptococcus phage Javan510, complete genome	15886-15915	0	1.0
NZ_CP013839_2	2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	756974-757003	30	NC_004588	Streptococcus prophage 315.5, complete genome	16035-16064	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448960	Streptococcus phage Javan492, complete genome	11384-11413	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448973	Streptococcus phage Javan522, complete genome	11719-11748	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448762	Streptococcus phage Javan447, complete genome	11511-11540	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	NC_004585	Streptococcus prophage 315.2, complete genome	13568-13597	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448848	Streptococcus phage Javan126, complete genome	8038-8067	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448857	Streptococcus phage Javan164, complete genome	8038-8067	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448966	Streptococcus phage Javan508, complete genome	13423-13452	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448970	Streptococcus phage Javan516, complete genome	15303-15332	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448795	Streptococcus phage Javan527, complete genome	17341-17370	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448677	Streptococcus phage Javan133, complete genome	9030-9059	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448953	Streptococcus phage Javan474, complete genome	14179-14208	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448790	Streptococcus phage Javan515, complete genome	11798-11827	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448772	Streptococcus phage Javan483, complete genome	13438-13467	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448778	Streptococcus phage Javan493, complete genome	11734-11763	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448958	Streptococcus phage Javan486, complete genome	11479-11508	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448793	Streptococcus phage Javan523, complete genome	12129-12158	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448954	Streptococcus phage Javan476, complete genome	11466-11495	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448957	Streptococcus phage Javan484, complete genome	15379-15408	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448764	Streptococcus phage Javan457, complete genome	7406-7435	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448782	Streptococcus phage Javan501, complete genome	14365-14394	0	1.0
NZ_CP013839_2	2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757106-757135	30	MK448798	Streptococcus phage Javan533, complete genome	34251-34280	0	1.0
NZ_CP013839_2	2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757106-757135	30	NC_028700	Streptococcus phage T12, complete genome	34105-34134	0	1.0
NZ_CP013839_2	2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757106-757135	30	MK448790	Streptococcus phage Javan515, complete genome	34021-34050	0	1.0
NZ_CP013839_2	2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757106-757135	30	MK448783	Streptococcus phage Javan503, complete genome	33167-33196	0	1.0
NZ_CP013839_2	2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757106-757135	30	MK448967	Streptococcus phage Javan510, complete genome	34252-34281	0	1.0
NZ_CP013839_2	2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757106-757135	30	NC_004588	Streptococcus prophage 315.5, complete genome	34401-34430	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448767	Streptococcus phage Javan467, complete genome	13110-13139	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448771	Streptococcus phage Javan481, complete genome	12824-12853	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	13215-13244	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448969	Streptococcus phage Javan514, complete genome	14546-14575	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448964	Streptococcus phage Javan502, complete genome	13089-13118	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448943	Streptococcus phage Javan450, complete genome	13110-13139	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448972	Streptococcus phage Javan520, complete genome	12462-12491	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448763	Streptococcus phage Javan451, complete genome	13240-13269	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448786	Streptococcus phage Javan509, complete genome	13110-13139	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448774	Streptococcus phage Javan487, complete genome	11660-11689	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448963	Streptococcus phage Javan498, complete genome	8732-8761	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448773	Streptococcus phage Javan485, complete genome	14546-14575	0	1.0
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	MK448777	Streptococcus phage Javan491, complete genome	13122-13151	0	1.0
NZ_CP013839_2	2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT	757238-757267	30	MK448795	Streptococcus phage Javan527, complete genome	42821-42850	0	1.0
NZ_CP013839_2	2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT	757238-757267	30	MK448941	Streptococcus phage Javan446, complete genome	39237-39266	0	1.0
NZ_CP013839_2	2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT	757238-757267	30	MK448962	Streptococcus phage Javan496, complete genome	27648-27677	0	1.0
NZ_CP013839_4	4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT	1147992-1148026	35	MK448764	Streptococcus phage Javan457, complete genome	17189-17223	0	1.0
NZ_CP013839_4	4.2|1148061|31|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148061-1148091	31	MK448764	Streptococcus phage Javan457, complete genome	13348-13378	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448960	Streptococcus phage Javan492, complete genome	29417-29448	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448762	Streptococcus phage Javan447, complete genome	29549-29580	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448965	Streptococcus phage Javan506, complete genome	30677-30708	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448791	Streptococcus phage Javan517, complete genome	29161-29192	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448959	Streptococcus phage Javan488, complete genome	30678-30709	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	NC_004587	Streptococcus prophage 315.4, complete genome	29256-29287	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	30526-30557	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448977	Streptococcus phage Javan530, complete genome	29161-29192	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448949	Streptococcus phage Javan460, complete genome	31338-31369	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448958	Streptococcus phage Javan486, complete genome	29586-29617	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448793	Streptococcus phage Javan523, complete genome	30640-30671	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448788	Streptococcus phage Javan511, complete genome	29161-29192	0	1.0
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448954	Streptococcus phage Javan476, complete genome	29025-29056	0	1.0
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448672	Streptococcus phage Javan117, complete genome	9051-9080	1	0.967
NZ_CP013839_2	2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT	757238-757267	30	NC_009819	Streptococcus phage P9, complete genome	36586-36615	1	0.967
NZ_CP013839_4	4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT	1147992-1148026	35	MH853357	Streptococcus phage LF3, partial genome	5792-5826	1	0.971
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448675	Streptococcus phage Javan129, complete genome	31992-32023	1	0.969
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	NC_004585	Streptococcus prophage 315.2, complete genome	30135-30166	1	0.969
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448955	Streptococcus phage Javan478, complete genome	32301-32332	1	0.969
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448966	Streptococcus phage Javan508, complete genome	29990-30021	1	0.969
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448772	Streptococcus phage Javan483, complete genome	30003-30034	1	0.969
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448850	Streptococcus phage Javan132, complete genome	31095-31126	1	0.969
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	NC_004584	Streptococcus prophage 315.1, complete genome	10316-10345	2	0.933
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448978	Streptococcus phage Javan532, complete genome	10211-10240	2	0.933
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448785	Streptococcus phage Javan507, complete genome	10211-10240	2	0.933
NZ_CP013839_4	4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT	1147992-1148026	35	KY363359	Streptococcus phage Str03, complete genome	6481-6515	2	0.943
NZ_CP013839_4	4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT	1147992-1148026	35	MK448731	Streptococcus phage Javan33, complete genome	22876-22910	2	0.943
NZ_CP013839_4	4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT	1147992-1148026	35	MK448992	Streptococcus phage Javan6, complete genome	20883-20917	2	0.943
NZ_CP013839_4	4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT	1147992-1148026	35	MK448888	Streptococcus phage Javan26, complete genome	20848-20882	2	0.943
NZ_CP013839_4	4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT	1147992-1148026	35	MK448863	Streptococcus phage Javan18, complete genome	19095-19129	2	0.943
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448686	Streptococcus phage Javan157, complete genome	30311-30342	2	0.938
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448951	Streptococcus phage Javan470, complete genome	29491-29522	2	0.938
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448859	Streptococcus phage Javan170, complete genome	31503-31534	2	0.938
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448676	Streptococcus phage Javan131, complete genome	34010-34041	2	0.938
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448688	Streptococcus phage Javan161, complete genome	31461-31492	2	0.938
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	NC_028700	Streptococcus phage T12, complete genome	11343-11372	3	0.9
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK448950	Streptococcus phage Javan464, complete genome	11389-11418	3	0.9
NZ_CP013839_4	4.2|1148061|31|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148061-1148091	31	MH853357	Streptococcus phage LF3, partial genome	1959-1989	3	0.903
NZ_CP013839_4	4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR	1148126-1148157	32	MK448694	Streptococcus phage Javan179, complete genome	29963-29994	3	0.906
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MN018232	Synechococcus phage S-B43, complete genome	165909-165938	8	0.733
NZ_CP013839_2	2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757040-757069	30	MK799832	Synechococcus phage S-B05, complete genome	94472-94501	8	0.733
NZ_CP013839_2	2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT	757172-757201	30	NZ_AP017564	Pseudanabaena sp. ABRG5-3 plasmid ABRG53d, complete sequence	107223-107252	9	0.7

1. spacer 2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 0, identity: 1.0

tatcactaactccctattgcgtggggaact	CRISPR spacer
tatcactaactccctattgcgtggggaact	Protospacer
******************************

2. spacer 2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 0, identity: 1.0

tatcactaactccctattgcgtggggaact	CRISPR spacer
tatcactaactccctattgcgtggggaact	Protospacer
******************************

3. spacer 2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

tatcactaactccctattgcgtggggaact	CRISPR spacer
tatcactaactccctattgcgtggggaact	Protospacer
******************************

4. spacer 2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 0, identity: 1.0

tatcactaactccctattgcgtggggaact	CRISPR spacer
tatcactaactccctattgcgtggggaact	Protospacer
******************************

5. spacer 2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 0, identity: 1.0

tatcactaactccctattgcgtggggaact	CRISPR spacer
tatcactaactccctattgcgtggggaact	Protospacer
******************************

6. spacer 2.1|756974|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 0, identity: 1.0

tatcactaactccctattgcgtggggaact	CRISPR spacer
tatcactaactccctattgcgtggggaact	Protospacer
******************************

7. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

8. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

9. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

10. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

11. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

12. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

13. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

14. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

15. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

16. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

17. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

18. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

19. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

20. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

21. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

22. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

23. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

24. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

25. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

26. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 0, identity: 1.0

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttgggatga	Protospacer
******************************

27. spacer 2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 0, identity: 1.0

acagaatcataagttcctgtcatgccgtat	CRISPR spacer
acagaatcataagttcctgtcatgccgtat	Protospacer
******************************

28. spacer 2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 0, identity: 1.0

acagaatcataagttcctgtcatgccgtat	CRISPR spacer
acagaatcataagttcctgtcatgccgtat	Protospacer
******************************

29. spacer 2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

acagaatcataagttcctgtcatgccgtat	CRISPR spacer
acagaatcataagttcctgtcatgccgtat	Protospacer
******************************

30. spacer 2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 0, identity: 1.0

acagaatcataagttcctgtcatgccgtat	CRISPR spacer
acagaatcataagttcctgtcatgccgtat	Protospacer
******************************

31. spacer 2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 0, identity: 1.0

acagaatcataagttcctgtcatgccgtat	CRISPR spacer
acagaatcataagttcctgtcatgccgtat	Protospacer
******************************

32. spacer 2.3|757106|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 0, identity: 1.0

acagaatcataagttcctgtcatgccgtat	CRISPR spacer
acagaatcataagttcctgtcatgccgtat	Protospacer
******************************

33. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

34. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

35. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

36. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

37. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

38. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

39. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

40. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

41. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

42. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

43. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

44. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

45. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 0, identity: 1.0

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ttagaggcctatttcacagacaaagacatc	Protospacer
******************************

46. spacer 2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 0, identity: 1.0

gactcatcccaactaccgtaagccctaaag	CRISPR spacer
gactcatcccaactaccgtaagccctaaag	Protospacer
******************************

47. spacer 2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 0, identity: 1.0

gactcatcccaactaccgtaagccctaaag	CRISPR spacer
gactcatcccaactaccgtaagccctaaag	Protospacer
******************************

48. spacer 2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 0, identity: 1.0

gactcatcccaactaccgtaagccctaaag	CRISPR spacer
gactcatcccaactaccgtaagccctaaag	Protospacer
******************************

49. spacer 4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 0, identity: 1.0

gtatttgacatagtccagagtgtcagtcacatagt	CRISPR spacer
gtatttgacatagtccagagtgtcagtcacatagt	Protospacer
***********************************

50. spacer 4.2|1148061|31|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 0, identity: 1.0

tatatcgtggcagatatccccataatagtca	CRISPR spacer
tatatcgtggcagatatccccataatagtca	Protospacer
*******************************

51. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

52. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

53. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

54. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

55. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

56. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

57. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

58. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

59. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

60. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

61. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

62. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

63. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaggataggtttagc	Protospacer
********************************

64. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 1, identity: 0.967

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tatttcttgcaatcgcaatatttgggatga	Protospacer
*.****************************

65. spacer 2.5|757238|30|NZ_CP013839|CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 1, identity: 0.967

gactcatcccaactaccgtaagccctaaag	CRISPR spacer
gactcatcccaactatcgtaagccctaaag	Protospacer
***************.**************

66. spacer 4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT matches to MH853357 (Streptococcus phage LF3, partial genome) position: , mismatch: 1, identity: 0.971

gtatttgacatagtccagagtgtcagtcacatagt	CRISPR spacer
gtatttgacatagtcaagagtgtcagtcacatagt	Protospacer
*************** *******************

67. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 1, identity: 0.969

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgccttttatttttaggataggtttagc	Protospacer
*********** ********************

68. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 1, identity: 0.969

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaagataggtttagc	Protospacer
*******************.************

69. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 1, identity: 0.969

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaagataggtttagc	Protospacer
*******************.************

70. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 1, identity: 0.969

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaagataggtttagc	Protospacer
*******************.************

71. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 1, identity: 0.969

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaagataggtttagc	Protospacer
*******************.************

72. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 1, identity: 0.969

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgccttttatttttaggataggtttagc	Protospacer
*********** ********************

73. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.933

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttggaatca	Protospacer
*************************.** *

74. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.933

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttggaatca	Protospacer
*************************.** *

75. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.933

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tgtttcttgcaatcgcaatatttggaatca	Protospacer
*************************.** *

76. spacer 4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT matches to KY363359 (Streptococcus phage Str03, complete genome) position: , mismatch: 2, identity: 0.943

gtatttgacatagtccagagtgtcagtcacatagt	CRISPR spacer
atatttgacatagtcaagagtgtcagtcacatagt	Protospacer
.************** *******************

77. spacer 4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT matches to MK448731 (Streptococcus phage Javan33, complete genome) position: , mismatch: 2, identity: 0.943

gtatttgacatagtccagagtgtcagtcacatagt	CRISPR spacer
atatttgacatagtcaagagtgtcagtcacatagt	Protospacer
.************** *******************

78. spacer 4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT matches to MK448992 (Streptococcus phage Javan6, complete genome) position: , mismatch: 2, identity: 0.943

gtatttgacatagtccagagtgtcagtcacatagt	CRISPR spacer
atatttgacatagtcaagagtgtcagtcacatagt	Protospacer
.************** *******************

79. spacer 4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT matches to MK448888 (Streptococcus phage Javan26, complete genome) position: , mismatch: 2, identity: 0.943

gtatttgacatagtccagagtgtcagtcacatagt	CRISPR spacer
atatttgacatagtcaagagtgtcagtcacatagt	Protospacer
.************** *******************

80. spacer 4.1|1147992|35|NZ_CP013839|CRISPRCasFinder,CRT matches to MK448863 (Streptococcus phage Javan18, complete genome) position: , mismatch: 2, identity: 0.943

gtatttgacatagtccagagtgtcagtcacatagt	CRISPR spacer
atatttgacatagtcaagagtgtcagtcacatagt	Protospacer
.************** *******************

81. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 2, identity: 0.938

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaagataggtttaga	Protospacer
*******************.*********** 

82. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 2, identity: 0.938

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgatttttaagataggtttaga	Protospacer
*******************.*********** 

83. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 2, identity: 0.938

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgattcttaagataggtttagc	Protospacer
***************.***.************

84. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.938

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgccttttatttttaagataggtttagc	Protospacer
*********** *******.************

85. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 2, identity: 0.938

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtgcctttgattcttaagataggtttagc	Protospacer
***************.***.************

86. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 3, identity: 0.9

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tatttcttataatcgcaatatttgggatga	Protospacer
*.******..********************

87. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 3, identity: 0.9

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
tatttcttataatcgcaatatttgggatga	Protospacer
*.******..********************

88. spacer 4.2|1148061|31|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MH853357 (Streptococcus phage LF3, partial genome) position: , mismatch: 3, identity: 0.903

tatatcgtggcagatatccccataatagtca	CRISPR spacer
gatgtcgtggcagatatccccatagtagtca	Protospacer
 **.********************.******

89. spacer 4.3|1148126|32|NZ_CP013839|CRISPRCasFinder,CRT,PILER-CR matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 3, identity: 0.906

cctgtgcctttgatttttaggataggtttagc	CRISPR spacer
cctgtccctttgatttttaagataggtttaga	Protospacer
***** *************.*********** 

90. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MN018232 (Synechococcus phage S-B43, complete genome) position: , mismatch: 8, identity: 0.733

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
gtatatttggaatcgcaatattagggatgt	Protospacer
   * .*** ************ ****** 

91. spacer 2.2|757040|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to MK799832 (Synechococcus phage S-B05, complete genome) position: , mismatch: 8, identity: 0.733

tgtttcttgcaatcgcaatatttgggatga	CRISPR spacer
gtatatttggaatcgcaatattagggatgt	Protospacer
   * .*** ************ ****** 

92. spacer 2.4|757172|30|NZ_CP013839|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017564 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53d, complete sequence) position: , mismatch: 9, identity: 0.7

ttagaggcctatttcacagacaaagacatc	CRISPR spacer
ctagaagccaatttcacagacaaaatttct	Protospacer
.****.*** **************. . ..

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	30876 : 43190	8	Synechococcus_phage(28.57%)	NA	NA
DBSCAN-SWA_2	324069 : 330104	8	Streptococcus_phage(100.0%)	NA	NA
DBSCAN-SWA_3	601564 : 612167	9	Streptococcus_phage(57.14%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP013839|30876:43190|DBSCAN-SWA
TATGAATAAACGTATTTTTGTTGAGAAAAAGGCTGACTTTGGTATTAAATCGGCTAGTCTTGTGAAAGAGTTGACGCATAATCTACAACTGACCTCTTTGAAGGCTTTGCGTATTGTGCAGGTCTATGATGTCTTCAATTTGGCTGAGGATTTGCTGGCGCGTGCTGAGAAGCATATTTTCTCTGAGCAGGTGACAGACTGTCTTTTGACGGAAACTGAAATCACTGCGGAGCTTGATAAGGTTGCCTTCTTTGCCATTGAGGCGCTTCCTGGTCAATTTGACCAACGTGCTGCTAGTTCGCAAGAAGCTTTGCTATTATTTGGAAGCGACAGTCAGGTTAAGGTCAATACAGCCCAGCTTTACTTGGTCAATAAGGATATTACAGAAGCAGAGCTTGAAGCCGTTAAGAACTATCTTTTGAACCCTGTTGATTCGCGTTTCAAGGACATTACTTTGCCGCTTGAAGAGCAGGCTTTCTCTGTGTCTGATAAGACGATCCCTAATCTTGATTTCTTTGAAAATTATAAAGCTGACGATTTTACGGCCTATAAGGCAGAGCAGGGCTTGGCTATGGAGGTCGATGACCTTCTCTTCATCCAAGATTATTTCAAATCAATCGGACGTGTGCCAACTGAGACTGAGTTGAAAGTTTTGGATACTTACTGGTCAGACCACTGCCGTCACACAACCTTTGAAACTGAATTGAAGAACATTGATTTTTCAGCTTCTAAATTCCAAAAACAATTGCAGACAACTTATGACAAATATATCGCCATGCGTGATGAGCTTGGTCGTTCTGAAAAGCCACAAACACTTATGGATATGGCGACTATTTTTGGTCGTTATGAGCGTGCCAACGGTCGTCTGGACGATATGGAAGTCTCAGATGAAATCAATGCCTGCTCAGTTGAGATTGAAGTAGATGTTGATGGTGTGAAAGAGCCTTGGCTCCTCATGTTTAAGAACGAGACTCACAATCACCCAACAGAAATTGAGCCATTCGGTGGAGCGGCGACTTGTATCGGTGGTGCTATTCGTGACCCATTGTCAGGGCGTTCATACGTTTATCAGGCTATGCGTATTTCAGGCGCAGGCGATATCACGACTCCGATTGCGGAAACACGTGCTGGTAAATTGCCACAACAAGTTATTTCTAAAACTGCGGCGCACGGCTATTCTTCATATGGTAACCAAATTGGGCTTGCGACAACTTATGTGCGTGAGTACTTCCACTCTGGCTTTGTAGCCAAACGTATGGAGCTTGGAGCTGTGGTTGGTGCTGCACCTAAGGAAAATGTGGTTCGTGAAAAACCAGAAGCAGGTGATGTGGTCATCTTGCTCGGTGGTAAAACAGGTCGTGATGGTGTCGGCGGTGCGACAGGTTCATCTAAGGTTCAAACGGTTGAATCTGTGGAAACAGCAGGAGCAGAGGTACAAAAAGGGAATGCCATCGAAGAGCGTAAGATTCAACGTCTTTTCCGTGATGGCAATGTCACTCGTCTGATCAAGAAATCAAATGACTTCGGTGCAGGTGGTGTCTGTGTTGCCATCGGTGAATTGGCTGACGGTCTTGAAATCGATTTGGACAAGGTGCCTCTTAAATACCAAGGTCTTAATGGTACTGAAATTGCAATCTCAGAATCTCAAGAGCGTATGTCAGTCGTTGTTCGTCTAAGTGATGTGGATGCCTTCATCGCAGCCTGCAACAAGGAAAATATCGATGCAGTCGTTGTTGCGACCGTTACTGAAAAACCAAATCTTGTCATGACTTGGAATGGCGAAATCATCGTTGATTTGGAACGCCGTTTCCTTGATACCAATGGTGTCCGTGTCGTTGTTGATGTTAAAGTCGTTGACAAGGACTTGACAGTTCCAGAAGCACGTACAACATCAGCAGAGACACTTGAAGCAGATACGCTTAAGGTCTTGTCTGACCTCAACCACGCTAGTCAAAAAGGTCTCCAAACCATCTTTGACTCATCTGTTGGTCGTTCAACCGTTAACCACCCAATCGGTGGTCGTTACCAAATCACACCGACAGAAAGTTCTGTTCAAAAATTGCCAGTTCAACATGGTGTGACAACAACTGCATCTGTTATGGCTCAAGGTTACAATCCTTATATTGCAGAGTGGTCACCTTATCACGGTGCTGCCTATGCTGTCATTGAAGCGACAGCTCGCTTGGTAGCAACGGGTGCTGACTGGTCTCGTGCACGTTTCTCTTACCAAGAGTACTTTGAGCGTATGGATAAACAGGCAGAGCGTTTTGGTCAGCCAGTATCAGCTCTTCTTGGTTCTATTGAGGCTCAGATTCAACTTGGTTTGCCATCAATCGGCGGTAAGGACTCTATGTCTGGTACTTTCGAAGACTTGACAGTACCACCAACCTTGGTAGCTTTCGGCGTGACAACAGCGGACAGCCGCAAGGTTCTCTCTCCTGAGTTTAAAGCGGCTGGCGAAAACATTTACTATATCCCAGGTCAAGCTATTTCAGAAGATATTGATTTTGACCTTATCAAGGATAACTTTAGCCAGTTTGAAGCTATTCAAGCTCAACATAAGATTACAGCTGCCTCAGCCGCTAAATACGGTGGTGTCCTAGAAAGTCTTGCTCTCATGACTTTTGGTAACCGTATCGGTGCTTCTGTTGAAATTGCAGAGCTTGACAGCAGCTTGACAGCTCAACTCGGAGGTTTTGTCTTTACATCAGCTGAGGAAATTGCTGACGCGGTGAAAATCGGTCAAACTCAGGCAGACTTTACAGTCACAGTCAATGGAAATGACCTTGCTGGCGCTAGCCTTCTAGCAGCCTTCGAAGGCAAATTGGAAGAGGTTTACCCAACAGAATTTGAACAGACAGATGTTCTTGAAGAAGTTCCTGCTGTGGTATCAGATACTGTTATCAAGGCTAAGGAAACAATTGAAAAACCAGTGGTTTACATTCCAGTCTTCCCTGGTACCAACTCAGAATACGATTCAGCTAAGGCCTTTGAACAGGTTGGAGCTAGTGTCAACTTGGTACCATTTGTAACCTTGAATGAGGTTGCTATTGCTGAGTCAGTTGACACTATGGTTGCTAATATTGCTAAGGCAAATATCATCTTCTTTGCTGGAGGTTTCTCAGCAGCGGATGAACCAGATGGGTCTGCTAAGTTTATCGTCAATATCTTGCTTAACGAGAAGGTCCGCGCAGCTATTGACAGCTTCATCGAAAAAGGTGGCCTTATCATCGGTATCTGTAATGGTTTCCAAGCCCTTGTTAAATCAGGTCTTCTTCCATACGGAAACTTCGAGGAAGCTGGTGAGACAAGTCCAACTCTCTTCTATAACGATGCTAATCAGCATGTTGCCAAGATGGTTGAGACTCGTATCGCAAATACCAACTCACCTTGGTTGGCAGGAGTTGAGGTCGGCGATATTCATGCCATTCCAGTTTCACATGGTGAAGGTAAATTTGTTGTCAGCGCTTCTGAATTTGCAGAGCTAAGAGACAATGGTCAAATCTGGAGCCAATATGTGGACTTTGACGGACAACCATCTATGGATTCTAAATACAATCCAAACGGCTCTGTCAATGCCATCGAAGGGATTACCAGCAAGAATGGTCAAATCATCGGTAAGATGGGACACTCAGAACGCTGGGAAGACGGACTCTTCCAAAATATCCCTGGTAACAAAGACCAAACCCTCTTTGCAAGTGCTGTAAAATACTTTACAGGGAAGTAAAAAGGTTCAGTGAACCTTTTTAGCCCTCGCCTTGAATTAGTGAAGGGCGAGGTTAGAAAGAATCTCGCTTAATTTTTGAGAAATAGTAAACACGGGCGATAAGTTGTGCGAAAAACTTTCTATTTTCGCTTTACTTGACAGCCTTTGTATCGAGGTAAAAATGACATACGAAGTAAAATCTCTAAATGAAGAATGTGGAGTCTTTGGTATCTGGGGACATCCTCAGGCAGCTCAAGTCACTTACTTTGGGCTTCATAGCCTTCAACATCGCGGTCAAGAAGGAGCTGGTATTGTTTCAAATGACAATGGGAAACTCTATGGTTATCGAAATGTTGGGCTCCTTTCTGAAGTTTTTAAGAATCAATCTGAATTAGATAATTTAACTGGGAATGCGGCTATTGGACATGTTCGGTATGCTACTGCAGGTTCTGCAGATATTCGCAATATTCAGCCTTTTCTTTATAAATTTCATGACGGGCAATTTGCTTTATGCCATAATGGTAATTTGACAAATGCTATTTCCTTAAGGAAAGAATTAGAAAAGCAAGGTGCAATTTTCAATGCCTCCTCAGATACTGAAATTTTAATGCATTTGATTCGTCGAAGCCATAACCCAAATTTCATAGGAAAGGTAAAAGAAGCTCTAAATACAGTAAAGGGTGGCTTTGCCTATCTACTGATGACAGAAAATAAACTCATTGCTGCTCTTGACCCTAATGCCTTTCGTCCTTTGTCAATTGGACAAATGCAAAATGGTGCCTGGGTTATTTCCAGTGAGACCTGTGCTTTTGAGGTGGTAGGCGCAAAATGGGTTAGAGATGTTGAACCTGGCGAAGTTATTCTTATAGACGATAGTGGTATTCAATGTAATCGTTATACTGATGAAACGCAACTGGCAATTTGTTCGATGGAATATGTCTATTTTGCAAGGCCGGATTCAACTATACATGGTGTTAATGTTCATACGGCTCGAAAAAATATGGGAAAGCATCTTGCACAAGAATTTAAACAGGATGCTGATATTGTAATTGGTGTCCCAAATTCGTCCTTATCGGCTGCTATGGGCTTTGCTGAAGAATCCGGATTACCAAATGAGATGGGTCTTGTAAAAAATCAGTATACGCAGCGAACCTTTATTCAACCGACACAAGAATTAAGGGAACAAGGTGTTCGAATGAAACTATCAGCGGTATCTGGTGTTGTCAAAGGAAAGCGCGTTGTTATGATTGATGACTCAATTGTAAGAGGAACGACTTCTAGAAGGATTGTCGGATTATTAAGAGAAGCAGGAGCTAGTGAAGTACATGTTGCTATAGCTAGTCCAGAATTAAAGTATCCTTGTTTTTATGGTATTGATATTCAAACAAGACGAGAATTAATTTCAGCAAATCACGCTGCTGACGAAGTGTGTGATATTATTGGCGCAGATAGTCTGACCTATCTCTCACTAGATGGGTTGATTGAATCAATTGGACTCGAAACAAAAGCACCAAATGGTGGTTTATGCGTAGCTTACTTTGATGGACATTATCCAACACCGCTTTATGATTATGAAGAAGAATACCTCAGAAGTTTAGAAGAAAAAACAAGTTTTTATATTCAAAAAGTGAAATAAGCTCTGCTAATTATATAAGGAGAAAACATGTCTGAAAAAAATGCTTATGCAAAATCTGGTGTTGATGTTGAAGCTGGTTATGAAGTGGTTGAAAGAATAAAAAAACACGTTGCTCGTACAGAACGTGCGGGAGTCATGGGAGCTCTAGGTGGCTTTGGTGGGATGTTTGACTTGAGTAAAACAGGAGTTAGAGAGCCTGTTTTGGTCTCAGGGACAGACGGTGTTGGCACAAAACTCATGCTTGCTATCAAGTACGACAAGCACGACACAATCGGTCAAGACTGTGTTGCCATGTGTGTCAATGATATTATTGCAGCAGGTGCTGAGCCCCTTTACTTCCTTGACTACGTAGCGACAGGAAAAAATAATCCAGTCAAATTTGAAGAAGTTGTTTCTGGCGTTGCAGAAGGTTGTGTTCAAGCAGGAGCAGCACTCATTGGAGGTGAGACCGCTGAAATGCCTGGGATGTATGGCGAAGATGATTATGACCTTGCTGGCTTTGCTGTTGGTGTGGCTGAAAAATCTCAGCTCATCGACGGTTCAAAAGTAAAGGAAGGCGATATTCTTTTGGGATTTGCTTCAAGTGGTATCCATTCAAACGGTTATTCTTTGGTACGTCGTGTCTTTGCTGACTATACTGGTAAAGAGCTGCTTCCAGAACTTGAAGGAAAACAACTTAAGGATGTCCTTCTTGAGCCAACTCGTATTTATGTTAGAGCAGCTCTGCCATTAATCAAGGAAGAACTAGTCAACGGTATCGGCCACATCACAGGTGGTGGCTTTATCGAGAATGTTCCTCGTATGTTTGCAGATGATTTGGCTGCGGAAATCGATGAGGACAAGGTGCCAGTGCTTCCGATTTTCAAGGCGCTTGAAAAATATGGTGACATCAAGCACGAAGAAATGTTTGAAATCTTCAATATGGGTGTCGGTCTTATGCTAGCTGTTAGTCCTGAAAATGTTAACCGCGTCAAAGAGCTCTTGGATGAACCAGTTTATGAAATTGGTCGTATCATCAAGAAAGCAGACGCTAGTGTGGTGATTAAATAAGTCACTAAATTTTATAAGAAAGGAGTGTTTAGTTAGTTTGCCTAACTGAACACGGGATTAAATTTCTAGGAAAAAAGATAAAATGACTTAGACGCAAGCGTCGTTGTTCGTTTTCCTATTTTTCTACGAAATTTTTCGGCAAGCCGAATCATCCCTTTGTATCGAATATGAAAATCGCTGTTTTTGCTTCTGGTAATGGTTCCAACTTTCAGGTCATAGCAGAGCACTTTCCAGTTAGTTTTGTCTTTTCAGATCATCGTGATGCCTATGTTTTAGAGCGTGCTCAGAATTTAGCCATTCCAAGCTTCGCTTTTGAACTCAAGGAGTTTGAGAATAAGGCGGCTTACGAGCAAGCCATCGTTGATTTGTTGGACAAACACGAGATTGACTTAGTCTGTCTGGCGGGCTATATGAAGATTGTTGGAGAAACCTTACTCTTGGCCTATGAGAGGCGTATTATCAATATTCACCCAGCCTACCTGCCTGAATTTCCAGGTGCCCACGGTATCGAGGATGCTTGGGAAGCTGGTGTTGACCAGTCTGGCGTGACCATCCACTGGGTTGACTCTGGTGTGGATACCGGTCAGGTCATCCAACAAGTGCGCGTGCCACGCCTAGCAGACGATAGCCTAGAAAGCTTTGAAACCCGTATCCATGAAACCGAATATCAACTCTACCCAGCTGTCTTAGATAGCTTGGGAGTGGAGAGGAAAGTAATCTAGCCTTTATCTTAAAATTTTAGGTAAAGTTAGGAAAGATAGTAAAGAAGAATTAACGTTCCAAAAAGAAAGGAATTGAACCCGTCTGGAAGGCACAGAAAAAAGATAAACATCTCCTAGGCGCAAGCGTCTTCGTCGAGTTTCCTATTTTTCCTTGGCCTTCTAGTCGGACTTGGTATCTTAAATATGACTAAACGTGCTTTAATCTCAGTGTCTGACAAGTCAGGAATTGTTGACTTTGCAAAAGAATTGAAAAACTTGGATTGGGATATTATCTCAACTGGTGGGACTAAGGTTGCCCTTGACGATGCTGGTGTTGAGACCATTGCCATCGACGATGTGACTGGATTCCCAGAGATGATGGACGGTCGTGTTAAGACCCTCCACCCAAACATTCACGGTGGGCTTTTGGCTCGTCGCGACGCTGACAGCCACCTTCAGGCTGCTAAGGACAACAATATCGAGCTGATTGACCTCGTGGTTGTCAACCTCTATCCCTTCAAGGAGACTATCCTTCGTCCAGACATAACCTATGATTTGGCGGTGGAAAACATCGACATCGGCGGTCCATCAATGCTTCGCTCAGCCGCTAAAAATCACGCTAGCGTGACCGTTGTGGTTGACCCAGCGGATTATGCGACTGTTTTGGGAGAATTGGCTGACGCTGGTCAGACGACATTTGAAACGCGTCAACGCTTGGCAGCTAAGGTCTTTCGTCACACAGCAGCCTACGACGCTTTGATTGCTGAGTACTTCACAACTCAAGTGGGAGAGGCTAAGCCTGAAAAATTAACCATCACTTACGACCTTAAACAGGCTATGCGTTACGGAGAAAATCCACAACAAGACGCTGATTTCTATCAAAAAGCCTTGCCAACAGACTACTCAATTGCTTCTGCTAAACAGCTCAACGGAAAAGAATTGTCCTTCAATAATATCCGTGATGTTGATGCAGCAATCCGTATTATCCGTGATTTCAAAGACCGTCCGACAGTGGTTGTCCTCAAACACATGAACCCATGTGGTATCGGACAGGCTGATGATATTGAGACTGCTTGGGATTACGCTTATGAAGCTGACCCAGTTTCAATCTTTGGTGGAATTGTCGTCCTTAACCGTGAAGTTGACGCAGCGACAGCCAAGAAGATACACCCTATCTTTTTGGAAATCATCATCGCACCATCATACTCAGAAGAAGCGCTAGCTATTCTCACAAATAAAAAGAAAAACTTGCGAATCCTTGAGTTGCCGTTTGATGCCCAAGCTGCCAGCGAAGTGGAAGCTGAGTACACTGGCGTAGTTGGTGGACTTTTGGTGCAAAACCAAGACGTTGTGGCTGAAAATCCATCTGACTGGCAAGTGGTGACAGACCGCCAACCAACAGAACAAGAGGCGATTGCCCTTGAGTTTGCCTGGAAGGCTATCAAGTATGTTAAGTCTAACGGGATTATTATTACTAACGATCACATGACGCTTGGACTCGGTGCAGGTCAAACCAACCGTGTCGGCTCAGTCAAGATTGCTATCGAGCAGGCTAAAGACCACCTTGACGGTGCCGTTCTAGCATCAGATGCCTTCTTCCCATTTGCGGACAACATTGAAGAAATCGCTGCCGCAGGGATCAAAGCAATCATCCAACCAGGTGGTTCAGTTCGTGACCAAGACTCTATTGACGCCGCAAACAAACATGGCTTGACCATGATCTTCACAGGTGTGAGACATTTTAGGCATTAATAAAAAAATGTGGTCTAATTAAAACCACATTTTTTATTAAAAGAAAATATAAGTTAACTATAATTTGTTAGCTTTATCAGCATTTACCCATGTTCCACGAGATCCGATTTGAACATAAATACCATTACTTGGTTGATCAATTTTTAATACTTTATAACTACCAGTGACGATAAAATATTCACCCACACGGAGAATTTGATCTCCTAAAACTTTTCCTTGGTTATCTGTTTCATCTAATGGTGTGGGATCAATCCAGTTTAGTGGAGTTGGGTCTCCTCCGGCTAATTCTTTATTAACGATCAAATTATTAACAAGCTGATCTACACGAAAAACGCCAGGGAAGGTAACAGTATCACCGACCTTAATGGAAGGTTTTGTATTGTCATTTTGAACCACAGACTGTGCGGGCTCTTTAATGGGAATATAGCGTCGGTTTCCAGAAAAACTGAGGTAGCTAAGCCATGTATAACCTCCAGCAGTCACGACTTTATCGTAATAAACAGATTGACCTGCTTCATAGTAAGCAAGATCAGGGCTATCGATACTGGTTTGTCCTTTGACTGGTAATCTGGTTGTAAAGTGATAAGTTCCAGAGGGGTCAAATGAAGCTTGAGAAATGTGTTTTAGTTGTCTTGGGTAGGAATGACTTGTCTGAGATGATAAGTCTTTAAAATGGATATAACCACTTACCTGAGATTTTGGAATTTGACGCTTATGGTATCTTTCAGGGCCTTGTCCAGCGTTGTAATTATACTCTTCGATAGTGACAGTGTCTCCACGGATATCAGCTACCCATGCTACATGACCGTAAGCAGCATTTGACTGATAAGCGTTTTTATCAAACCAAGCGATAGCCCCTATGCTTGGTGTCTTATTCACAGGATAACCCTGATTTTTCGCGATATGTCCCCACGTGCAGGCATTACCGTAGCCTTTAGGTAACTGAAAACCATTAGCAGAGCTTAAACGAAAAGCTGCAAAAGAAGTGCATTGGCGGATATACATGTTCCACGAATCGATTCCATTGCCTTTTTTCCACTTACTCGGATAGTTATCGCCTAAAACAGCTGCATGAACAAGATTTTCCTGTTGCGAAATAAGTGTAGATGGCATAGTAGGTACTAGACCATTAAAACCTAAAAGGATTACTCCTGAGACCAAAAAACGATGAAATTTTTTCATTAATTACCTCCTGTAACTTATTATTCGAAAGCAAGAAACAAAAAATGTTATTTTTAGATGATTATTTTGAAAATTGGCTTTACTTGATATTAAATAACTGTTTGATTGGCTAATAGAGTGTTCCTTATTTCAAGAATTGTGGTCTACTATCACATTTTTACAATGTTTCAATTATTGATAACTAATACATTATGTAAAAAAAGCGAACGTTTATGATATAATATCTAATTATAATACGAAAGAGGTGGATGTTTTGAAATTACTTGTTGTTGGTTCAGGTGGGCGTGAACATGCGATTGCTAAGAAGTTGTTAGCGTCTAAGGGTGTGGATCAGGTTTTTGTGGCACCTGGTAATGATGGTATGACCTTGGATGGTCTGGACTTGGTGAATATAGTAGTTTCCGAACATTCTAGGTTGATTGCCTTTGCTAAGGAGAATGAGATTTCTTGGGCCTTTATTGGTCCTGATGATGCGCTAGCAGCTGGTATCGTTGATGATTTCAACAGTGCTGGACTCAGAGCTTTTGGTCCAACAAAGGCAGCAGCGGAGCTAGAGTGGTCAAAAGACTTTGCCAAGGAAATCATGGTCAAATACAATGTCCCAACAGCAGCCTATGGCACATTTTCAGACTTTGAAAAAGCCAAAGCCTACATCGAAGAGCAGGGCGCACCTATCGTGGTCAAGGCTGATGGCTTGGCGCTAGGTAAGGGTGTGGTCGTGGCTGAAACCGTTGAGCAGGCGGTAGAGGCGGCGCAAGAGATGCTTCTGGACAATAAGTTTGGCGACTCAGGAGCGCGTGTGGTTATCGAGGAATTCTTGGATGGCGAGGAGTTTTCCCTCTTTGCCTTTGTTAATGGTGATAAGTTCTACATCATGCCGACAGCTCAGGATCACAAGCGTGCCTTTGACGGAGACAAGGGGCCAAACACTGGTGGTATGGGTGCCTATGCGCCTGTTCCCCACCTGCCTCAGAGCGTGGTGGATACAGCGGTTGAGACCATCGTTAAGCCTGTCCTTGAAGGTATGATTGCCGAAGGGCGTCCTTATCTAGGCGTCCTCTATGCGGGGCTTATTCTGACGGCTGATGGCCCTAAGGTTATTGAGTTCAACTCACGTTTCGGTGACCCTGAAACTCAGATTATCCTCCCTCGCCTGACTTCTGATTTCGCTCAGAACATCGACGATATCATGATGGGCATTGAGCCTTACATCACTTGGCAGAAGGACGGCGTGACTCTGGGCGTTGTCGTTGCCTCAGAAGGCTATCCGCTCGATTACGAGAAAGGTGTGCCACTGCCTGAAAAGATCGACGGCGACATCATCACCTACTATGCTGGAGCTAAGTTTGCGGAAAATAGCGAGCTACTTCTCTCAAACGGAGGACGTGTCTATATGCTTGTCACCACAGAAGACAGCGTCAAAGCAGGGCAGGACAAAATCTATACCCAGCTAGCCCAACAAGACCCAACAGGTCTCTTCTACCGAAATGACATCGGAAGCAAAGCTATAAGAGAATAAGACTAACCATTCAAATATTAGCGTCAGCAATCAACGACCGAAGGTCGCTCCAAAAAGAAAGAAGAAAGGAACTGAACACGGGACTAATTTCCTAGGAAAAAAATAAAACTACCTGGACGCAAGCGTCATCGTTAGTTTTCTGCGTCGTAGGCGTCTGATGCTAAAGCACCTAGTCGCCCTGACGTGGGTTCGTCTTCGAAATCAAAGATTTCGGACTTACCGCATATTTTTCTACGGAAATTTTCGACAAGTCGAAACGCCCCTTTGTATCTTAATTATGAAAACTCCAATTATTTCTATTATCATGGGCTCCAAATCTGACTGGGCAACCATGCAAAAAACGGCTGAAGTTCTAGACAACTTTGGCATTGCTTACGAGAAGAAAGTCGTCTCTGCCCACCGTACGCCAGACCTCATGTTCAAGCATGCTGAGGAAGCACGTGGTCGTGGCATCAAAATCATCATCGCAGGAGCAGGTGGGGCAGCTCACTTGCCTGGTATGGTGGCAGCTAAAACAACCCTGCCTGTTATCGGTGTGCCTGTCAAATCACGTGCCCTTTCAGGTTTGGATTCACTCTATTCGATTGTGCAGATGCCTGGCGGTGTGCCTGTGGCAACCATGGCTATCGGAGAAGCGGGAGCGACTAACGCTGCCCTGACAGCCCTCCGTATTCTCTCCATCGAGGATCAAAATCTGGCTGATGCGCTAGCTCATTTCCATGAGGAACAAGGAAAAATCGCAGAGGAGTCAAGTGGTGAACTCATTTAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP013839|30876:43190|38172_39720_+|WP_031488747.1|DBSCAN-SWA
MTKRALISVSDKSGIVDFAKELKNLDWDIISTGGTKVALDDAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRPDITYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYATVLGELADAGQTTFETRQRLAAKVFRHTAAYDALIAEYFTTQVGEAKPEKLTITYDLKQAMRYGENPQQDADFYQKALPTDYSIASAKQLNGKELSFNNIRDVDAAIRIIRDFKDRPTVVVLKHMNPCGIGQADDIETAWDYAYEADPVSIFGGIVVLNREVDAATAKKIHPIFLEIIIAPSYSEEALAILTNKKKNLRILELPFDAQAASEVEAEYTGVVGGLLVQNQDVVAENPSDWQVVTDRQPTEQEAIALEFAWKAIKYVKSNGIIITNDHMTLGLGAGQTNRVGSVKIAIEQAKDHLDGAVLASDAFFPFADNIEEIAAAGIKAIIQPGGSVRDQDSIDAANKHGLTMIFTGVRHFRH
>NZ_CP013839|30876:43190|34762_36217_+|WP_023611320.1|DBSCAN-SWA
MTYEVKSLNEECGVFGIWGHPQAAQVTYFGLHSLQHRGQEGAGIVSNDNGKLYGYRNVGLLSEVFKNQSELDNLTGNAAIGHVRYATAGSADIRNIQPFLYKFHDGQFALCHNGNLTNAISLRKELEKQGAIFNASSDTEILMHLIRRSHNPNFIGKVKEALNTVKGGFAYLLMTENKLIAALDPNAFRPLSIGQMQNGAWVISSETCAFEVVGAKWVRDVEPGEVILIDDSGIQCNRYTDETQLAICSMEYVYFARPDSTIHGVNVHTARKNMGKHLAQEFKQDADIVIGVPNSSLSAAMGFAEESGLPNEMGLVKNQYTQRTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMIDDSIVRGTTSRRIVGLLREAGASEVHVAIASPELKYPCFYGIDIQTRRELISANHAADEVCDIIGADSLTYLSLDGLIESIGLETKAPNGGLCVAYFDGHYPTPLYDYEEEYLRSLEEKTSFYIQKVK
>NZ_CP013839|30876:43190|39777_40902_-|WP_010921776.1|DBSCAN-SWA
MKKFHRFLVSGVILLGFNGLVPTMPSTLISQQENLVHAAVLGDNYPSKWKKGNGIDSWNMYIRQCTSFAAFRLSSANGFQLPKGYGNACTWGHIAKNQGYPVNKTPSIGAIAWFDKNAYQSNAAYGHVAWVADIRGDTVTIEEYNYNAGQGPERYHKRQIPKSQVSGYIHFKDLSSQTSHSYPRQLKHISQASFDPSGTYHFTTRLPVKGQTSIDSPDLAYYEAGQSVYYDKVVTAGGYTWLSYLSFSGNRRYIPIKEPAQSVVQNDNTKPSIKVGDTVTFPGVFRVDQLVNNLIVNKELAGGDPTPLNWIDPTPLDETDNQGKVLGDQILRVGEYFIVTGSYKVLKIDQPSNGIYVQIGSRGTWVNADKANKL
>NZ_CP013839|30876:43190|37434_37989_+|WP_031488746.1|DBSCAN-SWA
MKIAVFASGNGSNFQVIAEHFPVSFVFSDHRDAYVLERAQNLAIPSFAFELKEFENKAAYEQAIVDLLDKHEIDLVCLAGYMKIVGETLLLAYERRIINIHPAYLPEFPGAHGIEDAWEAGVDQSGVTIHWVDSGVDTGQVIQQVRVPRLADDSLESFETRIHETEYQLYPAVLDSLGVERKVI
>NZ_CP013839|30876:43190|30876_34602_+|WP_031488744.1|DBSCAN-SWA
MNKRIFVEKKADFGIKSASLVKELTHNLQLTSLKALRIVQVYDVFNLAEDLLARAEKHIFSEQVTDCLLTETEITAELDKVAFFAIEALPGQFDQRAASSQEALLLFGSDSQVKVNTAQLYLVNKDITEAELEAVKNYLLNPVDSRFKDITLPLEEQAFSVSDKTIPNLDFFENYKADDFTAYKAEQGLAMEVDDLLFIQDYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELKNIDFSASKFQKQLQTTYDKYIAMRDELGRSEKPQTLMDMATIFGRYERANGRLDDMEVSDEINACSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMRISGAGDITTPIAETRAGKLPQQVISKTAAHGYSSYGNQIGLATTYVREYFHSGFVAKRMELGAVVGAAPKENVVREKPEAGDVVILLGGKTGRDGVGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRDGNVTRLIKKSNDFGAGGVCVAIGELADGLEIDLDKVPLKYQGLNGTEIAISESQERMSVVVRLSDVDAFIAACNKENIDAVVVATVTEKPNLVMTWNGEIIVDLERRFLDTNGVRVVVDVKVVDKDLTVPEARTTSAETLEADTLKVLSDLNHASQKGLQTIFDSSVGRSTVNHPIGGRYQITPTESSVQKLPVQHGVTTTASVMAQGYNPYIAEWSPYHGAAYAVIEATARLVATGADWSRARFSYQEYFERMDKQAERFGQPVSALLGSIEAQIQLGLPSIGGKDSMSGTFEDLTVPPTLVAFGVTTADSRKVLSPEFKAAGENIYYIPGQAISEDIDFDLIKDNFSQFEAIQAQHKITAASAAKYGGVLESLALMTFGNRIGASVEIAELDSSLTAQLGGFVFTSAEEIADAVKIGQTQADFTVTVNGNDLAGASLLAAFEGKLEEVYPTEFEQTDVLEEVPAVVSDTVIKAKETIEKPVVYIPVFPGTNSEYDSAKAFEQVGASVNLVPFVTLNEVAIAESVDTMVANIAKANIIFFAGGFSAADEPDGSAKFIVNILLNEKVRAAIDSFIEKGGLIIGICNGFQALVKSGLLPYGNFEEAGETSPTLFYNDANQHVAKMVETRIANTNSPWLAGVEVGDIHAIPVSHGEGKFVVSASEFAELRDNGQIWSQYVDFDGQPSMDSKYNPNGSVNAIEGITSKNGQIIGKMGHSERWEDGLFQNIPGNKDQTLFASAVKYFTGK
>NZ_CP013839|30876:43190|36244_37267_+|WP_031488745.1|DBSCAN-SWA
MSEKNAYAKSGVDVEAGYEVVERIKKHVARTERAGVMGALGGFGGMFDLSKTGVREPVLVSGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYVATGKNNPVKFEEVVSGVAEGCVQAGAALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQLIDGSKVKEGDILLGFASSGIHSNGYSLVRRVFADYTGKELLPELEGKQLKDVLLEPTRIYVRAALPLIKEELVNGIGHITGGGFIENVPRMFADDLAAEIDEDKVPVLPIFKALEKYGDIKHEEMFEIFNMGVGLMLAVSPENVNRVKELLDEPVYEIGRIIKKADASVVIK
>NZ_CP013839|30876:43190|41155_42421_+|WP_031488748.1|DBSCAN-SWA
MKLLVVGSGGREHAIAKKLLASKGVDQVFVAPGNDGMTLDGLDLVNIVVSEHSRLIAFAKENEISWAFIGPDDALAAGIVDDFNSAGLRAFGPTKAAAELEWSKDFAKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPIVVKADGLALGKGVVVAETVEQAVEAAQEMLLDNKFGDSGARVVIEEFLDGEEFSLFAFVNGDKFYIMPTAQDHKRAFDGDKGPNTGGMGAYAPVPHLPQSVVDTAVETIVKPVLEGMIAEGRPYLGVLYAGLILTADGPKVIEFNSRFGDPETQIILPRLTSDFAQNIDDIMMGIEPYITWQKDGVTLGVVVASEGYPLDYEKGVPLPEKIDGDIITYYAGAKFAENSELLLSNGGRVYMLVTTEDSVKAGQDKIYTQLAQQDPTGLFYRNDIGSKAIRE
>NZ_CP013839|30876:43190|42698_43190_+|WP_002987716.1|DBSCAN-SWA
MKTPIISIIMGSKSDWATMQKTAEVLDNFGIAYEKKVVSAHRTPDLMFKHAEEARGRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKSRALSGLDSLYSIVQMPGGVPVATMAIGEAGATNAALTALRILSIEDQNLADALAHFHEEQGKIAEESSGELI

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031488744.1|30876_34602_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	7.3e-38	26.7
WP_023611320.1|34762_36217_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.7e-54	32.3
WP_031488745.1|36244_37267_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	5.2e-63	41.8
WP_031488746.1|37434_37989_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-25	36.1
WP_031488747.1|38172_39720_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.8e-44	51.8
WP_010921776.1|39777_40902_-	CHAP domain-containing protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
WP_031488748.1|41155_42421_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_002987716.1|42698_43190_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.2e-18	42.3

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP013839|324069:330104|DBSCAN-SWA
GATGATCACAGGAAAACTCATAACCGTTGAAGGTCCAGATGGCGCAGGGAAAACGACTGTTTTAGAGCAACTCATTCCACTGTTAAAACAAAAAGTGGCTCAGGAGATCTTGACAACAAGAGAGCCTGGAGGTGTTGCCATTTCAGAATACATTAGAGAACTTATTTTAGACATCAACCATACTACTATGGACCCTAAAACAGAACTCTTACTTTATATTGCGGCTCGAAGGCAGCATTTGGTGGAAAAGGTACTACCAGCTCTTGAAGCAGGCCAGTTGGTTTTTATTGATCGTTTCATCGATAGTTCAGTAGCTTATCAAGGTGCGGGACGCGGTTTGACCAAAGCAGACATTCAGTGGCTCAACGAGTTCGCAACAGATGGTTTAGAGCCTGACTTGACCCTTTATTTTGATGTTCCTTCTGAAATTGGTTTAGCACGGATTAACGCGAACCAACAAAGAGAAGTCAATCGTTTAGATTTGGAAACAATAGAGATACATCAACGAGTACGAAAAGGATACCTAGCCTTAGCTAAGGAGCATCCAAAACGTATTGTCACAATTGATGCGACTAAACCATTGAAAGAAGTTGTCTCTGTCGCTTTGGAACATGTCTTAGCCTTGCTTTTAGCCTAGGATAAGGGAGGGTAGGAATGGATTTAGCGCAAAAAGCTCCTAACGTTTATCAAGCTTTTCAGACGATTTTAAAGAAAGACCGTCTGAATCATGCTTATCTTTTTTCGGGTGATTTTGCTAATGAAGAAATGGCTCTTTTTTTAGCTAAGGTCATCTTTTGTGAACAGAAAAAGGATCAGACGCCCTGCGGGCATTGTCGCTCTTGTCAATTGATTGAACAAGGAGATTTTGCCGATGTGACGGTATTGGAACCAACAGGGCAAGTGATTAAAACGGATGTGGTCAAAGAAATGATGGCTAACTTTTCTCAGACAGGATATGAAAACAAACGACAAGTTTTTATTATCAAAGATTGTGACAAAATGCATACCAATGCCGCTAATAGCTTGCTAAAGTATATTGAGGAGCCTCAGGGAGAAGCTTACATGTTTTTGCTGACCAATGATGATAACAAAGTGCTTCCGACCATTAAAAGTCGGACACAGGTTTTTCAGTTTCCTAAAAACGAAGCCTATCTTTACCAATTGGCACAAGAAAAGGGATTATTAAACCATCAGGCTAAGCTAGTAGCCAAACTTGCCACAAACACCAGTCATCTAGAACGTCTGTTGCAAACGAGCAAGCTTTTAGAACTGATAACTCAAGCAGAGCGTTTTGTATCTATTTGGCTGAAAGATCAGTTGCAGGCATATTTAGCGTTGAACCGTCTGGTACAGTTAGCAACTGAAAAAGAAGAACAAGATTTAGTTTTGACCCTTTTGACCTTGCTCTTGGCAAGAGAGCGTGCGCAAACGCCTTTGACACAATTGGAGGCTGTTTATCAGGCTAGGCTCATGTGGCAGAGCAATGTTAATTTTCAAAACACATTAGAATATATGGTGATGTCAGAATAAGTGCAATTGGAATTCGTTATGGGGAAACGAAGCTTGTCAAAAGACTTGCCCTTAGCGACCAAAGTAGCGGCGCATAGGGGCAAAACAAGCTTTTGAAGAAAATACTGCCTTTGCAACAGATTTGATGAAAGAAGTATCACGATTAATAACACAAAATCAACTTGAAATGACGTTTATTAATAGTGTCTTTCCCTTAGATCAGCATGTTGTCCTAATTCCCTTTTCAGCAGAAGAGCACATGGATTTTTACAACTGTTAAAAGATTTAGCGGCCGATTTTAGGTCAAGAAGTGAGCTGCCCCAGATTAACAGCCAAGAAGAAACCAAGATTTATGGGCGCTTAGGACCGTGTGGCAGACCACTGTGCTGCTTTCGTTTTTGGGAAAATTTCTGACAGTATCTATTAAAATACTAAAAAATCAAAGGTTATCATTGACTTTGGGTAAAGCAACAAGCCCTTATGGCCGTTTGCTTTGCTGTCTCTATGATGAAGGTGGCTTTTACCAATAAAGCAAGAAAAAATTCCCTGAATATGGTACCATAGTAGAGACAAGTGATGGCCCTGCAACAGTAGCAGCCTTGATATATTTACAGATCCCATTAAGGTGCGGTTAAAAGACCAGTTGACCTTAGTCACTTATGCTTTAGAGGAGGTTAAAGTAGGTGAATAAAAAAGAATTATTCGATGCTTTTGATGGATTTTCCCAAAATTTAATGGTTACTTTAGCTGAAATTGAAGCCATGAAAAAACAAGTCCAATCACTAGTAGAAGAAAACACGATTCTTCGCCTAGAAAATACAAAACTACGGGAACGTTTGAGTCACCTAGAACATGAAACGGTAGCTAAAAATCCTTCCAAACAAAGGAAGGATCACTTAGAGGGAATTTATGATGAAGGGTTTCATATCTGCAATTTTTTCTATGGACAACGTCGTGAAAATGATGAAGAATGTATGTTTTGCAGAGAATTATTAGATAGAAAGTAAGGGCATGCAGGTTCAAAAAAGTTTTAAAGACAAAAAAACAAGCGGAACCTTGTATTTGGTTCCAACCCCGATTGGCAATCTGCAGGACATGACCTTTAGAGCAGTGGCAACGTTAAAAGAGGTTGATTTTATTTGTGCAGAAGACACAAGAAACACAGGTCTTTTGCTAAAACACTTTGACATTGCTACCAAGCAAATCAGCTTTCATGAGCACAACGCCTATGAGAAGATTCCTGATTTAATTGATTTATTAATATCAGGACGGTCATTAGCTCAGGTGTCTGATGCAGGAATGCCATCGATTTCTGATCCTGGGCATGATTTGGTCAAGGCTGCTATTGATAGTGATATCGCAGTCGTTGCTTTACCAGGTGCCTCAGCTGGGATTACAGCTTTGATTGCTAGTGGACTGGCTCCTCAACCCCATGTTTTTTATGGGTTTTTACCCAGAAAAGCAGGGCAACAAAAGGCTTTCTTTGAGGACAAACACCATTACCCAGAGACACAAATGTTTTATGAATCACCCTATCGCATCAAAGATACCCTGACCAATATGTTGGCTTGTTATGGTGATCGTCAAGTGGTGCTTGTCAGAGAATTAACCAAGCTTTTTGAGGAGTACCAACGGGGGGCGATTTCAGAAATCTTGTCCTACCTTGAGGAAACACCCCTAAAAGGGGAGTGTCTGCTGATTGTGGCTGGAGCCCAAGTAGACAGTGAGGTTGAGCTGACAGCTGATGTTGACTTAGTGTCTCTAGTGCAAAAAGAAATCCAAGCAGGAGCCAAGCCAAATCAGGCTATTAAAACAATTGCTAAAGCTTACCAGGTAAATCGCCAAGAGCTTTACCAACAATTTCATGACTTATAAGTCATCGTAGATTAGGAGAAAAACAAATGACAGAAGATCAAGCAACTATCCTTATTTTAGGAGTATACGGAATCATATTGGCTGTATTCTTATTATCAGCTTTATTATGCCTTATCGCTAACTGGCGACTCTTTAAAAGAGCAGGTTACAAAGGATGGTATAGTCTCATTCCTTTCTATGCAGGTTTTGTCAAACACAAAATCACTTTTGGAGAAGATAATAAATGGTTTTACTTTATTGGTTGGGTCATTGCTATTTATTATTACTATGTGCACTTTTGCTATGTCCGTGCTTTTGGTGGATCAAAGGGTCTAGCAGTATTTGGCTTGTTTTTCCCAGGCATTGCTTCTTTGATAGTGGCTTTTGGAAAAACTTATACCACACAAGAATGCCACCCTGTGCCACATCTTTTAAACTAAGAGAGAAAAGACTATCAATTGGATTTATTGATGGTCTTTTAGGTGTTTAAATGATTTTAGTCCCGTGAACAATGGCCGTTCCAGTGAGTTGACTCAAGCTTTGGCAATTCTCAGCAGTGACGCCTCCTCCAATCATGATTTCAATGCGTTTATTGGCATAGGTCACAAGACTTTTAAGTTGTTCCACATTGTCTGTAATAGGAGTAGCTTCAGGGGAGCCATGAGTTAGCACACGCACAAAGCCATAATCAATCAGTTGATCAAGCGCTTGGTGCTGGTGATCAGTCGGAATATGGTCAAAAGCCATGTGGAAAACCAGTGGCAAGCCTTGTGTAGCAGGCAGTAATTGCTCGATAGCGTCGGTATCCAGTTGATTTTCTGTGGTCAGCAAGCCTAAGACTAGCGCATCTGAGCCAGCTTCAACAGCTTTTAAGATATCTTCTTCCATAGCTTTTAGTTCGAGGTCGTTATAGACAAAATCGCCACCGCGAGGTCGAATCATGGTCGCTACGCTAATCTTTTTATCGTGTAAGAGCTGACAGGCTTCTTTGATGACGCCATAAGATGGCGTGGTCCCTCCGACAGCTAGGTTATCACAGAGTTCCACACGACTGACTTGACCAGCATCAAGGGTTGGCAGTAGTGTGAGGTTCTCAGCACAAAATTCTTTAATCATTTTTAGTTCTCCTTTATCACTAATATTATAGCACGAATGAAGCTAGTCATCAGGAAACATTTTTGTCAAATCATGGACATTATGCTATACTCACTAGTATTAAAAGTAGGCCAAAACAGCAGCAAATACTTTGAAAAAAGCTTGCTATGTTCTACGGCAATATCAGTCTTTACCAACGAACTCTCAAGAAGAAAAGAAAGACAAAGCTTAGCATTTTAAAAAAGCCTCCCCTTTTTTTGTGAAATGATGACCAAAAACAGGCGCCTCACGCCTAAAACAGTTACCCTAAAGGAGAAAAAATGATTACGATTTACCAATACCCAAAATGTAGCACCTGCCAAAGAGCCATGGCTGAATTAAAGCAACTGGTTAGTGACTTTGAAGCCATTGACATCAAAGCTAATCCACCCAAAGCTCAGGACCTCAAACATTGGATGGAAACATCTGGTTATACCATCAAAAATTTCTTTAATACCAGTGGTAACAGCTACCGCGAATTGGGACTTAAAGATAAAATAGACCAGCTTAGCCTTGATAAAGCTGCTGAACTCTTAGCCACAGATGGTATGCTGATTAAACGGCCTATTCTGATTAAGGACGGTAAAGTCCTACAAGTTGGCTATCGCAAGCCATATCAAGAGTTGGATTTAGGATAATGCGACAAAGTCTCAAAAAAGGACAAGGCAACATTATAACGCCTTGTCCTTTTTTGGGATCTGTTTTTAGACATTAGAGATCAATATCTAGTAAAATTGGTGTATGGTCTTGGCGTTCCCCAGAAGAAATCATTTCAGAACGCTTAACCTTATCCACGATTCGGTTTGAAGCTAGGCAATAGTCAATTCTCCAACCGGTATTATTGATTTTGCTGGTTTTGCTACGTTGTGCCCACCAGGTATAAACATGAGGAATATCGCCGTGCAAGTGACGAAAAGTATCTGTAAAGCCTCTTGCTAATAGGTTAGTAAAGCCTTGACGTTCTTCGTCGGTAAAACCAGGGGAACGTCGATTGCTGCTTGGATTTGCCAAATCAATCTCTTTGTGGGCAACGTTGTAATCTCCCGTAGCCAAAACAGGCTTTTGAGTATCAAGTTCAGTCAAGTAATCAGCGTATTTGTGGTCCCAGATTTGACGGTCATCTAACCGTCTTAGACCATCACCAGCATTAGGCGTGTAAACCTGTGTGACGAAAAAGTCTTCAAATTCTAGGGTAATGATACGGCCCTCAGCATCCATTGTTGTTGGGGCACCAATTTCTGGAAAAGTAATGACAGGGTTTAACGTGTTTTTGTACAGGAACATGGTGCCAGCATAGCCTTTCCTAGCAGGCTCAACTGAAGAACGCCACACATGCAAATAGTTTGGAAAGTAACTAAGTAGGGTCTCAATATGTTTTTTGGTAGGCCCCTTAGCAGATAATTTGGTTTCTTGAATGGCAATAATATCCGCATCTTGAGCGACTAAAGTGTCTAAAACAGCGCGTGATAAAAGCGCACGAGGGGACTCTCCTGTGAGAGCAGCATTTAAGGAATCAATGTTCCATGAAATCAGTTTCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP013839|324069:330104|324722_325598_+|WP_011528291.1|DBSCAN-SWA
MDLAQKAPNVYQAFQTILKKDRLNHAYLFSGDFANEEMALFLAKVIFCEQKKDQTPCGHCRSCQLIEQGDFADVTVLEPTGQVIKTDVVKEMMANFSQTGYENKRQVFIIKDCDKMHTNAANSLLKYIEEPQGEAYMFLLTNDDNKVLPTIKSRTQVFQFPKNEAYLYQLAQEKGLLNHQAKLVAKLATNTSHLERLLQTSKLLELITQAERFVSIWLKDQLQAYLALNRLVQLATEKEEQDLVLTLLTLLLARERAQTPLTQLEAVYQARLMWQSNVNFQNTLEYMVMSE
>NZ_CP013839|324069:330104|326260_326584_+|WP_002985838.1|DBSCAN-SWA
MNKKELFDAFDGFSQNLMVTLAEIEAMKKQVQSLVEENTILRLENTKLRERLSHLEHETVAKNPSKQRKDHLEGIYDEGFHICNFFYGQRRENDEECMFCRELLDRK
>NZ_CP013839|324069:330104|327917_328547_-|WP_009880724.1|DBSCAN-SWA
MIKEFCAENLTLLPTLDAGQVSRVELCDNLAVGGTTPSYGVIKEACQLLHDKKISVATMIRPRGGDFVYNDLELKAMEEDILKAVEAGSDALVLGLLTTENQLDTDAIEQLLPATQGLPLVFHMAFDHIPTDHQHQALDQLIDYGFVRVLTHGSPEATPITDNVEQLKSLVTYANKRIEIMIGGGVTAENCQSLSQLTGTAIVHGTKII
>NZ_CP013839|324069:330104|324069_324705_+|WP_014635306.1|DBSCAN-SWA
MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINHTTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLTKADIQWLNEFATDGLEPDLTLYFDVPSEIGLARINANQQREVNRLDLETIEIHQRVRKGYLALAKEHPKRIVTIDATKPLKEVVSVALEHVLALLLA
>NZ_CP013839|324069:330104|326588_327452_+|WP_021733048.1|DBSCAN-SWA
MQVQKSFKDKKTSGTLYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHFDIATKQISFHEHNAYEKIPDLIDLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDIAVVALPGASAGITALIASGLAPQPHVFYGFLPRKAGQQKAFFEDKHHYPETQMFYESPYRIKDTLTNMLACYGDRQVVLVRELTKLFEEYQRGAISEILSYLEETPLKGECLLIVAGAQVDSEVELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQFHDL
>NZ_CP013839|324069:330104|329276_330104_-|WP_014635309.1|DBSCAN-SWA
MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFEDFFVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTELDTQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGWRIDYCLASNRIVDKVKRSEMISSGERQDHTPILLDIDL
>NZ_CP013839|324069:330104|328846_329203_+|WP_002995120.1|DBSCAN-SWA
MITIYQYPKCSTCQRAMAELKQLVSDFEAIDIKANPPKAQDLKHWMETSGYTIKNFFNTSGNSYRELGLKDKIDQLSLDKAAELLATDGMLIKRPILIKDGKVLQVGYRKPYQELDLG
>NZ_CP013839|324069:330104|327478_327871_+|WP_002985833.1|DBSCAN-SWA
MTEDQATILILGVYGIILAVFLLSALLCLIANWRLFKRAGYKGWYSLIPFYAGFVKHKITFGEDNKWFYFIGWVIAIYYYYVHFCYVRAFGGSKGLAVFGLFFPGIASLIVAFGKTYTTQECHPVPHLLN

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014635306.1|324069_324705_+	dTMP kinase	M1PSC7	Streptococcus_phage	2.0e-65	63.4
WP_011528291.1|324722_325598_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.8e-72	47.9
WP_002985838.1|326260_326584_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.3e-28	59.4
WP_021733048.1|326588_327452_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.8e-115	74.7
WP_002985833.1|327478_327871_+	hypothetical protein	NA	NA	NA	NA
WP_009880724.1|327917_328547_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_002995120.1|328846_329203_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	2.8e-40	66.7
WP_014635309.1|329276_330104_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	4.2e-127	79.5

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP013839|601564:612167|DBSCAN-SWA
ATTATTCTCTATTTTTGGTGTTATCCTCTTTTAGTTCAGAAGTTGCCGCGTCAGCTTCTACGGGATTTAGTTCTAAGTAAGATGGTGCTTTAAAAAGTTTCTGAGTTGATTTATGACCATTTTTACTGTATAAACTTGTTGACTCTGATCCGAGTTTTGCTGAAATATCTTTCAGTTGTTTTAACTGCTTAGTGTAGATAAACTGGTTAGGATCAATAGCTTTTAGACCATTTTGAGTATCAAAGCGCAGGAGATCACCCGTTTGAATAGCGTCGCTAGCTGCTAGTTGTTGAGCAACAGCAGAGCGAATTTCCTTAGTTTTGGCTATAGTCATTTCATCGGGATTAGTGATTTCTAAACCTGTTTGCGTGTTGTACAGACGTCCACTATAGTTAGTGTATTCAGGAGTCATATAAGTCCCAGATGTTCGTTGTGCCACAATCTGGCTATTTTGAGGTGATAATAAATCTTGTCCTAATTGAACAAACTGACTAGTGTCAATACCAAGTATGTGGAGTAAAGTAGGAAGAGCATCGATTTCACCGCCAAAGGTTTCTTTGATACTACCATTCGTATAACCTGGAATATGGATCATATACGGGACTCGTTGTAGCATAGCATTATCATATTCAGACCAAGTTTCAGAATCTTTACCAAGAAGTGGAGCAAGACTAGAATTACGAGAATTTGAAATACCATAATGGTCACCATATAAAACAAAAATAGAATTGTCGTACAAACCAGTGGCTTTCAAGTAATCAAAAAAAGATTTAAGGGCAGCGTCTAAATAATTGGCAGTAGCAAAGTAACCATTGATCGTTTCATCGTCTGTTTTGGCTAAAGGAAAACCTTCTTCACTACTTTCGCCTTTTAGACTAGTATAAGGATAGTGATTACTCACAGTGATAAACTTGGTATAAAAAGGTTGTTGCATCTGTTCAAGATATTTTATGGAATCCTTAAACATGTACTTATCATTTAACCCATATTGAAAAGAGTTCTTACTATTTTGTTTAGAGAAGTAGCTAGAATCAAAAAAATAATTATAGCCCCATTGTTTATAAGCATTATTGCGATTCCAGAAAGTTCCAACGTTACCATGAAAGACAGCGCTGGTATAGCCACCTTTTTGGGCTAAAATACTTGGAGTAGCAAATTGTGTATTTTCACCACCGTAGTTCACCATAAAAGAACCACTATTTAAACCAAATAAGGAATTCTCCATCATGGTTTCAGCATCAGAAGTTTTACCTGCTTTAACCTGATGAAAAAAGTTAGGGAATGCTAAGGTAGCATTTGAGTGATAAAGCGAGTTGATAAAAGGCGTTACCTCATATTCTTTATCTCCTTCTTTTAGTTTATAATCTATTAAGAATTGTTGAAAGCTTTCTAAATGAAGAACAATAATATTTTTGCCTTTTCCAATTCCAAAATACTGGGGATCAGGTGCTGCATAATGTCCTTTGACATAAGTTTTAACATCAATTAATTCTTCTGCAGTAGCTCCATTTCGTTCTTTTTGAGCTTGATAGGTTTGATTGCCGCTATAGAGGGTAAACGCTGGTAATCCTAAAGCTCTCACAATATAAGTATTTGAAAAGCCACGTGTTAATAGTTCCGGACGATCAATTTCTGCTAAAAAAAGATTAATAGAAAGCAATAGACTAGATAAAGCGGTGATGGCAAATGCTGCGCGCTTGTTAAAAGGACGTTGATCATTTTTGATTTTTTTAGTGATAGATAAACTAATTAGAATAATAAAATCAAGAATATAGATAATATCCCAGATGCGTAAAAGGTTTAAAGCAGAGTCCCCTAATCCAGCGGAGACTTTACTGCTAGCTAGCATGGCACTCACTGTAATAAAGTCTGAAAATTCTCGGTAATATATAGAATTTGATATCAAGAGAATGTTAAGGATAATATAAACCACCCAAGAACAGATATAAAAGGCTCGGGTATTCTTAACGTAAAGAGCGACCCCCAAAAGTAAAAAAGCTAGTGGGATTGGATTGATAATTGTTAGAAAGACTTGGTATATATTTCCCAAATCTAGTGAAAAGTCTGTATGATATGCCCACAGAGTCTTTATCCAGTAACAAAAGAGTAGAGTAATTATAAAACCCAATCTTGTGTTGATAAAACCTGTGATAAGTGTTTTAAATTTCTTCACAGTAGCAACTTCCTTATCGTTTTTTCCTAAAGATGTCATCTCCAAATAAAATCTCAGATTAAATTATACCAAAAATGTGAAGCTAATGCTTGTTGTAAGTTCAAATTTAGTAGGATTTTTTATCAGATTTTGTTATAATAAAAACTATGAATAAACTCTATATTGATTCTTTTGTCGAAAAGAAGCTGACAGCAGGGGTACAATTATTAGATGAAAAAGATTTTTCTAATATAAAGGAAAAAAATCAGTTGGTTCAACTGGTGACCAAGTCCAATCGTCCCATTGGAACAGCATATATCTCTAAGCAAAATAAAGGAATTGGTTGGTATCTAGGACCAGAAAAAATCGACTTGTCTATCTCTTATTTTGTTAGTCTATTTTCAGTTGCTAAGGCCAAAAGACAAGATTTTGCTCAATCGGACGAGACCAATGCTTATCGCCTTTTTAATCAAGAAGGAGACGGTTTTGGTGGAGTAACAATTGATCTTTATAAAGATTTTGCAGTCTTTTCATGGTACAATGCCTTTGTCTATGACAAAAAAGAAATGATTATGGAGGCTTTTCAACAGGTTTTTCCTGAAGTCAAAGGAGCTTATGAAAAGTGTCGCTTTAAAGGTCCAGATACTGAAACTGCTCATCTGTATGGTGAGCTGGCACAAGAAACCTTTTCGATTTTAGAAAATGGCATAGCCTATCAAGTCTTCTTGAATGAGGGCTTAATGACAGGTATTTTTCTAGACCAGCATGATGTTAGAAGAGCACTAGTAGATGGTTTAGCTATGGGCAAGTCCCTTCTTAACCTATTTTCCTATACAGCTGCCTTTTCTGTAGCAGCTGCGATGGGTGGTGCTATCGAGACCACTTCTGTGGACTTGGCTAAACGATCGAGAGAATTATCACTAGCTCATTTTGAGCATAACCAGTTAAACTTAGCCTCACATCATTTTGTGGTGATGGATGTTTTTGAATACTTCAAATATGCCAAACGGAAAAAATTAATCTTTGATGTGATTGTGATTGACCCACCAAGCTTTGCTAGAAATAAAAAACAAACTTTCTCTGTGAGCAGGGACTACCACAAATTAATCACAGAGGCCTTGGACATATTGAGTCCTAAGGGAACTATTATAGCTTCAACAAATGCTGCTAATATGACTGTTAGCCAGTTCAAAAAGCAAATTATCAAAGGATTTGGAAGTCGTCGTCCTGAGTCTATGACTCTCCAGCAGCTTCCGAGTGACTTTACTATCAATAAAGCAGATGAAAGAAGTAACTATTTAAAGGTATTTACTATAAAGGTACGAGAATGAGAATTGTAGCACCAGTCATGCCAAGACATTTTGACGAGGCTCAAGCCATTGATATTTCTAAATATGAAGATGTTAATTTAATTGAATGGCGAGCAGACTTTCTTCCCAAGGATGAGATTGTCGCAGTAGCACCAGCTATTTTTGAAAAATTTGCCGGAAAAGAAATTATCTTTACCCTTCGGACCGTTCAAGAAGGGGGGAATATTACCCTTTCAAGTCAGGAGTATGTTGATATTATCAAAGAAATCAATGCTATTTATAATCCAGACTATATTGACTTTGAGTATTTTACGCACAAGTCAGTATTTCAAGAAATGCTTGATTTTCCAAATCTTATTTTGTCTTATCACAACTTTGAAGAGACTCCTGAAAATTTAATGGAAGCTTTTTCAGAAATGACCAAGTTGGCACCGCGTGTGGTTAAAATTGCTGTGATGCCCCAGAGTGAACAAGATGTTCTAGATCTGATGAACTATACCAGAGGCTTTAAGACGCTCAATCCTGAGCAAGAATTTGCAACTATATCTATGGGGAAATTAGGAAGATTGTCTCGTTTTGCGGGAGATGTCATTGGCTCTTCCTGGACATACGTTTCATTAGATCATGTTAGCGGTCCAGGTCAAGTGGCTCTCAATGATATGAAACGTATTATTGAGGTCTTAGAAATGGATATCTCTAACTAGTGAATGGTCTAAAAATATTATTTCTACAATAGTTAAGAAATGATGTTTTTAGATTAATGTTTTTAAAATAAGTGGAACCAAAAAGGAGAAAAATTGCGTTATTTAACAGCAGGAGAATCTCATGGGCCATCCTTAACAGCTATTATTGAAGGTATACCAGCAGGATTAACTCTTCATCCAGCGGATATTGATCACGAATTACAGCGACGTCAAGGAGGTTATGGCCGTGGTGCCAGAATGTCTATTGAGACTGATCGGGTTCAAATATCCTCAGGAGTTCGTCATGGCAAAACAACAGGGGCCCCCATTACCTTAACGGTAATTAATAAGGACCACCAAAAATGGCTAGATGTCATGGCTGTAGGAGACATTGAAGAGACTCTCAAGTTAAAGCGTCGTGTTAAGCATCCTAGACCAGGACATGCGGATTTGGTAGGAGGTATTAAATATCATTTTAACGATTTAAGAGATGCTTTAGAGCGCTCCTCGGCTAGAGAAACAACGATGAGAGTGGCTGTAGGCGCTGTTGCTAAACGTATCTTAGCTGAACTTGGAATTGATATGTTACATCATATCTTAATATTTGGTGGTATAACGATCACAATACCTTCTAAGCTCTCTTTTAGAGAGCTGCAAGAAAGGGCTCTCCATTCAGAATTATCTATTGTTAATCCAAAGCAAGAAGAAGAAATTAAAACGTATATTGATAAGATAAAAAAAGAAGGGGATACCATTGGTGGTATTATCGAAACGATAGTTCAAGGGGTGCCAGCAGGTCTTGGATCTTATGTCCAATGGGATAAAAAATTAGATGCCAAGCTGGCTCAAGCAGTTCTTTCCATTAATGCTTTTAAAGGGGTGGAATTTGGAGTTGGGTTTGATATGGGATTCCAAAAGGGCTCTCAGGTAATGGATGAAATCACCTGGACACCTACCCAGGGCTATGGTCGTCAAACAAACCACTTAGGTGGCTTTGAAGGTGGCATGACCACAGGACAACCTCTTGTTGTTAAAGGGGTTATGAAGCCCATTCCTACTTTGTATAAACCACTCATGTCGGTAGATATTGATAGTCATGAACCTTATAAAGCAACGGTGGAACGCTCTGATCCGACGGCCTTACCAGCTGCAGGGGTTATCATGGAAAATGTGGTGGCGACGGTGCTTGCCAAAGAGATTTTAGAGACTTTTTCTTCTACTACCATGTCTGAATTGCAAAAAGCTTTTTCGGACTATCGTGCCTACGTCAAGCAATTTTAGATAGCGAGATACTGGCTTTTATGGTATCATACAGGTATTAATGAACAAAAGGAGACTGTCATGTCACAAGAAATTTATGACTATGCTAATCAACTTGAAAGAGCAGTTCGTGCTCTGCCAGAATACCAAAAAGTGTTAGAAGTAAAAGAGGCCATTCAAGCAGACGTTAGTGCTAGCGAACTGTTTGATGAGTTTGTCGCTATGCAAGAAAAAATCCAAGGGATGATGCAATCAGGCCAAATGCCAACGGCTGAAGAACAAACAAGCATTCAAGAACTTAGCCAAAAGATTGAAGCTAATGACCAGCTAAAAGCTTATTTTGAAGCGCAGCAGGCCTTATCTGTTTACATGAGTGATATTGAGCGTATTGTATTTGCTCCGTTGAAAGATTTAGTCAAGTAAGCCAATTAAGATAGGAAAAAAACAGATTGCTGGCAGCTCGTCAGGATCTGTTTTTTAGTGTTTATTTTCTTTGTATCAGAAAGTTGAGCCTCTTTCTTATTTGTGATATAGTCAAATAAAGTGACCAAAATAGCAGGCCAGTAGTGGCTTTAATGAAGGCAAGTTGTCTGCTAACTGGCTATGCTAAAACATCAGTATTAGAAAGTAAAAGGTGATAAAAATGGTTATTCCTTATGATTATATTGTTATTGGTGGAGGGAGTGCAGGTATTGCTTCTGCGAACAGGGCAGCCATGCATGGGGCCAAAGTATTGTTAGCTGAAGGTAAAGAGATTGGGGGAACCTGTGTTAACCTAGGCTGCGTTCCTAAAAAAGTCATGTGGTATGGCGCTCAAGTAGCAGATATTTTAGGGACTTACGCTAAGGATTATGGATTTGACTTTAAAGAGAAAGCATTTGATTTTAAACAATTGAAAGCAAATCGTCAAGCTTATATTGATCGGATTCATGCTTCTTATGAGCGAGGCTTTGAGCAGAATGGTGTTGACCGTATTTATGATTATGCTGTTTTCAAAGATGCTCATACGGTAGAAATTGCAGGGCAGCTTTATACCGCACCGCATATTTTGATTGCCACAGGAGGACATCCTGTTTTTCCAGATATTGAGGGGGCACAATACGGTATCAGCTCGGACGGCTTTTTTGCCTTAGATGAGGTACCAAAACGTACGGCTGTGGTTGGGGCAGGCTATATTGCTGTGGAACTTGCCGGTGTTTTGCATGCTTTGGGGTCGAAGACGGATTTGTTTATCCGTCACGATCGACCTTTAAGAAGTTTTGACAAAGCCATTGTGGATGTTTTAGTTGAGGAAATGGCAGTTGGTGGTCCTTGCTTACACCCTCATTCAGAAGTGGCAAAGGTTGTCAAAAATACTGATGAGTCCTTGACCCTTTACCTCAAAGATGGCCAAGAAGTTGAGGTTGACCAGCTCATTTGGGCTATCGGTCGCAAGCCTAATCTAGAAGGTTTTAGTCTTGACAAAACTGGAGTGACGTTAAATGATAAAGGTTATATTGAGACAGATGCCTATGAAAACACGTCTGTCAAAGGTATTTATGCCGTGGGAGATGTTAATGGGAAACTGGCTTTAACTCCAGTTGCTGTGGCAGCTGGACGTCGCCTATCAGAGCGTCTTTTCAATGGCAAAACAGACGAGAAATTGGACTACCAGAACGTTGCTACTGTGATTTTTAGTCACCCTGTTATTGGCTCTGTTGGCTTGTCAGAAGAAGCAGCAGTCAAACAGTATGGGCAAGAAGCAGTTAAAACATATCAATCACGTTTTACGTCTATGTTTACTGCTATCACTAACCATCGCCAACCTTGTCTGATGAAGTTGGTAACAGTCGGAGATACCGAAAAAATAGTTGGTCTTCACGGAATCGGATACGGGGTTGACGAAATGATTCAGGGCTTTGCAGTAGCCATCAAAATGGGAGCAACCAAGGCGGATTTTGATAACACCGTTGCTATTCACCCAACTGGCTCAGAAGAATTTGTCACCATGCGCTAAAAAATGTAGCCTAAGGCAATAAAAAATGATGTTAACAGTTTTTGAGGAAAGTCTTCTAAACTGCTAGCATCGTTTTTTGTTAGGTGATTAGGGGAATATGTTTTTAAAGATATTTGCGTTGCTCAGACAATATTGCCTTACCTCGGAGATAAAATAAAGTGACCCTGTAACAACAAAGAGTTCATCAGATGTTACGGAACCTTGTAACCAGTCTCTGTAATCTTTTACCTGTGGGTATTTATCAGGATAATCCTCTAAAAGATTTGCTTCAGGGAAATCAAAAGTCGTGACAGATACTTCAAAAGTATCTAGTTGAGCCAGCAAGTCGGCTAAAGGCTTACGTTTGAGACCTGCAAAGAGAATATGAATAGGACGTTTGGGAAATTCTTCTTGCAGTAGAGACTTTAATTTAGCAATGGAATCTGGATTGTGAGCGCCGTCTAATAGAAGATTAGGTTGAATAAATTCGGACCGGCCAGGCCAAGTTGTTGCCTCAATTCCTTTTTGAATCGTTTTTGGAGATATTTTAGGAAAGGATTTTCTAAGTAATTGAGCTGTCATAATGGCTAAACAGGCATTCGCTTTTTGATGTTGACCTAATAGTTTGAGACGGAGTTTGGTTAAATTCAAGTTATCGTGTTGAAAGGAAAACGTCTTTTCTGAAGGATTGAGCAAAAAATCTTTTCCTAATTGATATAAGCGTGAACCGGCTTTTTGGGTAACTTGTTGAAAGACTTGACTAGCCTCCTGCTCAAGTTGACCGATAATAACGGGTTCTTTAGCTTTGATAACTTCTGCTTTTTGGTGAGCAATTTCTGCTAGGCTATAACCTAAACGTTCTTGGTGATCAAAACTAATGGAAGGGCATACGACGGCCAGAGCATGAAAAACATTGGTTGCGTCGGTTTTCCCACCAATCCCTGCCTCAATAATGGCAATATCAACAGGTTTAAGATTGGCAAAGTAGCAAAACATTATGAGAGTCACTAACTCAAACTCGGTAGGTCTATCCCAATTTGTTTCAAGGGACATTTTAGTGAGAATGGGTCTAATCACGCTCACACATTGCGCCAATTCTAGGTCTGAAATGGGCTGGCCATTAAGGCAGATCCGATCGTGAAAAGAGATGATAAAAGGAGATGTAAAGGTTCCGACCTGATAACCAGAAGTTGACAGGATATGCTGTAAGTAGGCTGTCACAGAGCCCTTGCCGTTAGTTCCAACAACGTGAATAGCAGGGAATTTGTCTTGTGGCCGGCCTAGTGCCTCAAGTAACCAAGCCATTCTGGCCAAATCGGTCTTGCGACCATTAGCCTTAAAGGTATGAATCCAGGAAATGCTATCATAGGTAGTCATTACTATTTCTTGTCCTTCTAACAATGCTTCTAAGGGTTCGTAGGAAGACCAGTATTAGCATCTTCAGCTCCAGTTGCATTAGGAAGTTGCGTCCCTTCAGTGGTTGATGGTGTCTCAGGGGCTGTAGGAGTTGTCTCGTTGTGAGAAGGTGTGGTAGAAGATGACGGAAGAGTTGTCTTATTATCATCTGTGGTTTCTGAAGTACCTGTATGGTTTTGATTACCCTGAGAAGACTCTTTTTCAATAATCTTGACAATGGTATTACTCGATTCTTTGGGTGTATCATTAGAGGTCTTATCTGGTACAGGCTGCAGTGCTCTTGTAATGGTAATGGTTGCCACAATGATACTCAAAATACTACCAATAAGTGCAATGGATTTTTGGAAAGCTGTAAAACCTGTTTTAATATGCTCGGTAGGGACACCTCCTGATTTACGAGGTTTTTGTTGACGGGAATAACGTGATGACATATTTTTCTCCTTTAAAATCATCGTAATGCCAAGATTAAGGAGGAGGAAACAGAAGTCCTAGCTCCTCTTTAACACTTCATCTATCAGTATAATCTAGAAAAAAAGTGAAGTCAACGGTTTACCTTATGTCTAGGACAAGGAAGTCCTTTGGGCTTATTGTAATACGAATATTCTTGATTTCATTTTAGCTATTTTGTGATAGAATAAAGTATTGAGTAAAAATGAAGGTGACACATGATTTATTTTGATAATGCAGCCACAACCATACCTTATGGAGAGGCTCTTAAAACTTACCAAGAAGTAGCAACAAAAATATATGGCAATCCCTCAAGTCTGCACCAATTAGGGACAAATGCGTCTCGCATTTTAGAAGCTTCCCGTAAACAGATTGCTGGTTTGTTGGGTGTTAAGTCAGAAGAAATCTTTTTTACGTCTGGTGGGACTGAAAGTGCTAATTGGGCTATTAAGGGAATTGCTTTTGAAAAAACCGCTTTTGGCAAACATATTATTATCTCAGCCATTGAACACCCTGCCGTGAGTGAAAGTGTCAAATGGCTTCTCACACAAGGATTCGAAGTTTCTTATGCTCCAGTGACAACACAGGGAGTTGTTGATGTGAATGCTTTAGCTGAGCTGATTAGACCAGACACCATCTTAATCTCGATTATGGCTGTTAATAATGAAATGGGAGCTATCCAACCGGTTAGAGCCATTTCAAACCTATTGGCTAACCAACCAACGATCACCTTTCACGTTGATGCTGTTCAAGCCATTGGTAAAATACCACTCTGTGATTATATGACTAATCGTGTGGATTTGGCTTCTTTTTCAGGGCACAAATTTCATAGTGTTCGTGGTGTTGGCTTCCTTTATAAAAAAGCAGGCAAGCGACTCAATCCTCTCTTGTCAGGCGGCGGCCAAGAGCAGGAGTTACGTTCAACCACTGAAAATGTTGCAGGAATTGCTAGCATGGCCAAAGCATTAAGAATAGTCACTGAAAAACAAGTGAGCGTCTTACCTAAACTAACAGCAATGCGAGATGTGATTTACAAAGCTTTGTCCGTTTACCCAGATGTGACAGTATTTTCAGCTCAAGAAGGCTTTGCGCCCAATATTTTGACCTTTGGGATTAGAGGGGTTCGAGGAGAAGTTATTGTCCACGCCTTTGAAAAATATGAGATTTATATTTCGACCACAAGTGCATGTTCGTCCAAAGCAGGTAAGCCAGCAGGAAGCCTAGTGGCTATGGGGATTCCTGTAAAAACTGCCCAGACAGCCGTTCGTATTAGTCTAGACGATGACAACGATATGGGACAAGTAGAGCAATTTTTGACCATATTCAAACAGATTTATGATAAAACACAGAAAGTTAGGTAA

Protein sequences of DBSCAN-SWA_3

>NZ_CP013839|601564:612167|607611_608964_+|WP_031488372.1|DBSCAN-SWA
MVIPYDYIVIGGGSAGIASANRAAMHGAKVLLAEGKEIGGTCVNLGCVPKKVMWYGAQVADILGTYAKDYGFDFKEKAFDFKQLKANRQAYIDRIHASYERGFEQNGVDRIYDYAVFKDAHTVEIAGQLYTAPHILIATGGHPVFPDIEGAQYGISSDGFFALDEVPKRTAVVGAGYIAVELAGVLHALGSKTDLFIRHDRPLRSFDKAIVDVLVEEMAVGGPCLHPHSEVAKVVKNTDESLTLYLKDGQEVEVDQLIWAIGRKPNLEGFSLDKTGVTLNDKGYIETDAYENTSVKGIYAVGDVNGKLALTPVAVAAGRRLSERLFNGKTDEKLDYQNVATVIFSHPVIGSVGLSEEAAVKQYGQEAVKTYQSRFTSMFTAITNHRQPCLMKLVTVGDTEKIVGLHGIGYGVDEMIQGFAVAIKMGATKADFDNTVAIHPTGSEEFVTMR
>NZ_CP013839|601564:612167|611024_612167_+|WP_031488371.1|DBSCAN-SWA
MIYFDNAATTIPYGEALKTYQEVATKIYGNPSSLHQLGTNASRILEASRKQIAGLLGVKSEEIFFTSGGTESANWAIKGIAFEKTAFGKHIIISAIEHPAVSESVKWLLTQGFEVSYAPVTTQGVVDVNALAELIRPDTILISIMAVNNEMGAIQPVRAISNLLANQPTITFHVDAVQAIGKIPLCDYMTNRVDLASFSGHKFHSVRGVGFLYKKAGKRLNPLLSGGGQEQELRSTTENVAGIASMAKALRIVTEKQVSVLPKLTAMRDVIYKALSVYPDVTVFSAQEGFAPNILTFGIRGVRGEVIVHAFEKYEIYISTTSACSSKAGKPAGSLVAMGIPVKTAQTAVRISLDDDNDMGQVEQFLTIFKQIYDKTQKVR
>NZ_CP013839|601564:612167|609051_610320_-|WP_002990257.1|DBSCAN-SWA
MTTYDSISWIHTFKANGRKTDLARMAWLLEALGRPQDKFPAIHVVGTNGKGSVTAYLQHILSTSGYQVGTFTSPFIISFHDRICLNGQPISDLELAQCVSVIRPILTKMSLETNWDRPTEFELVTLIMFCYFANLKPVDIAIIEAGIGGKTDATNVFHALAVVCPSISFDHQERLGYSLAEIAHQKAEVIKAKEPVIIGQLEQEASQVFQQVTQKAGSRLYQLGKDFLLNPSEKTFSFQHDNLNLTKLRLKLLGQHQKANACLAIMTAQLLRKSFPKISPKTIQKGIEATTWPGRSEFIQPNLLLDGAHNPDSIAKLKSLLQEEFPKRPIHILFAGLKRKPLADLLAQLDTFEVSVTTFDFPEANLLEDYPDKYPQVKDYRDWLQGSVTSDELFVVTGSLYFISEVRQYCLSNANIFKNIFP
>NZ_CP013839|601564:612167|605042_605729_+|WP_031488373.1|DBSCAN-SWA
MRIVAPVMPRHFDEAQAIDISKYEDVNLIEWRADFLPKDEIVAVAPAIFEKFAGKEIIFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDFEYFTHKSVFQEMLDFPNLILSYHNFEETPENLMEAFSEMTKLAPRVVKIAVMPQSEQDVLDLMNYTRGFKTLNPEQEFATISMGKLGRLSRFAGDVIGSSWTYVSLDHVSGPGQVALNDMKRIIEVLEMDISN
>NZ_CP013839|601564:612167|607049_607391_+|WP_010922140.1|DBSCAN-SWA
MSQEIYDYANQLERAVRALPEYQKVLEVKEAIQADVSASELFDEFVAMQEKIQGMMQSGQMPTAEEQTSIQELSQKIEANDQLKAYFEAQQALSVYMSDIERIVFAPLKDLVK
>NZ_CP013839|601564:612167|603882_605046_+|WP_002985142.1|DBSCAN-SWA
MNKLYIDSFVEKKLTAGVQLLDEKDFSNIKEKNQLVQLVTKSNRPIGTAYISKQNKGIGWYLGPEKIDLSISYFVSLFSVAKAKRQDFAQSDETNAYRLFNQEGDGFGGVTIDLYKDFAVFSWYNAFVYDKKEMIMEAFQQVFPEVKGAYEKCRFKGPDTETAHLYGELAQETFSILENGIAYQVFLNEGLMTGIFLDQHDVRRALVDGLAMGKSLLNLFSYTAAFSVAAAMGGAIETTSVDLAKRSRELSLAHFEHNQLNLASHHFVVMDVFEYFKYAKRKKLIFDVIVIDPPSFARNKKQTFSVSRDYHKLITEALDILSPKGTIIASTNAANMTVSQFKKQIIKGFGSRRPESMTLQQLPSDFTINKADERSNYLKVFTIKVRE
>NZ_CP013839|601564:612167|601564_603775_-|WP_011054348.1|DBSCAN-SWA
MTSLGKNDKEVATVKKFKTLITGFINTRLGFIITLLFCYWIKTLWAYHTDFSLDLGNIYQVFLTIINPIPLAFLLLGVALYVKNTRAFYICSWVVYIILNILLISNSIYYREFSDFITVSAMLASSKVSAGLGDSALNLLRIWDIIYILDFIILISLSITKKIKNDQRPFNKRAAFAITALSSLLLSINLFLAEIDRPELLTRGFSNTYIVRALGLPAFTLYSGNQTYQAQKERNGATAEELIDVKTYVKGHYAAPDPQYFGIGKGKNIIVLHLESFQQFLIDYKLKEGDKEYEVTPFINSLYHSNATLAFPNFFHQVKAGKTSDAETMMENSLFGLNSGSFMVNYGGENTQFATPSILAQKGGYTSAVFHGNVGTFWNRNNAYKQWGYNYFFDSSYFSKQNSKNSFQYGLNDKYMFKDSIKYLEQMQQPFYTKFITVSNHYPYTSLKGESSEEGFPLAKTDDETINGYFATANYLDAALKSFFDYLKATGLYDNSIFVLYGDHYGISNSRNSSLAPLLGKDSETWSEYDNAMLQRVPYMIHIPGYTNGSIKETFGGEIDALPTLLHILGIDTSQFVQLGQDLLSPQNSQIVAQRTSGTYMTPEYTNYSGRLYNTQTGLEITNPDEMTIAKTKEIRSAVAQQLAASDAIQTGDLLRFDTQNGLKAIDPNQFIYTKQLKQLKDISAKLGSESTSLYSKNGHKSTQKLFKAPSYLELNPVEADAATSELKEDNTKNRE
>NZ_CP013839|601564:612167|605822_606989_+|WP_002990262.1|DBSCAN-SWA
MRYLTAGESHGPSLTAIIEGIPAGLTLHPADIDHELQRRQGGYGRGARMSIETDRVQISSGVRHGKTTGAPITLTVINKDHQKWLDVMAVGDIEETLKLKRRVKHPRPGHADLVGGIKYHFNDLRDALERSSARETTMRVAVGAVAKRILAELGIDMLHHILIFGGITITIPSKLSFRELQERALHSELSIVNPKQEEEIKTYIDKIKKEGDTIGGIIETIVQGVPAGLGSYVQWDKKLDAKLAQAVLSINAFKGVEFGVGFDMGFQKGSQVMDEITWTPTQGYGRQTNHLGGFEGGMTTGQPLVVKGVMKPIPTLYKPLMSVDIDSHEPYKATVERSDPTALPAAGVIMENVVATVLAKEILETFSSTTMSELQKAFSDYRAYVKQF
>NZ_CP013839|601564:612167|610349_610790_-|WP_023612835.1|DBSCAN-SWA
MSSRYSRQQKPRKSGGVPTEHIKTGFTAFQKSIALIGSILSIIVATITITRALQPVPDKTSNDTPKESSNTIVKIIEKESSQGNQNHTGTSETTDDNKTTLPSSSTTPSHNETTPTAPETPSTTEGTQLPNATGAEDANTGLPTNP

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011054348.1|601564_603775_-	LTA synthase family protein	W6LM83	Streptococcus_phage	2.9e-268	69.1
WP_002985142.1|603882_605046_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
WP_031488373.1|605042_605729_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	2.4e-88	69.3
WP_002990262.1|605822_606989_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
WP_010922140.1|607049_607391_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	41.1
WP_031488372.1|607611_608964_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.3e-29	23.8
WP_002990257.1|609051_610320_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_023612835.1|610349_610790_-	hypothetical protein	NA	NA	NA	NA
WP_031488371.1|611024_612167_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	5.4e-24	26.8