CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP011388	Paenibacillus swuensis strain DY6, complete genome	9 crisprs	DEDDh,WYL,RT,DinG,csa3,cas3	0	3	4	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011388_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_1

562952-563070

Orphan

Consensus_repeat	Method
GGTGTTGGGAAGTAACCAGTTTGTTACAAGCAATGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011388_1

>merge|NZ_CP011388|1|562952-563070|CRISPRCasFinder
GGTGTTGGGAAGTAACCAGTTTGTTACAAGCAATGCTTATCATGCGATACTCATCCATAAGTGCGTCTATGCGGCTGGGTCCGGTGATGGGAAGTAACCAGTTTGTTACAAGCAATGCT

>NZ_CP011388|1|1|562952-563070|CRISPRCasFinder
GGTGTTGGGAAGTAACCAGTTTGTTACAAGCAATGCT	TATCATGCGATACTCATCCATAAGTGCGTCTATGCGGCTGGGTCC
GGTGATGGGAAGTAACCAGTTTGTTACAAGCAATGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_068603950.1\|561009_562587_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_CP011388.1\|WP_068603960.1\|569488_569737_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurS	unknown	unknown	gnl\|CDD\|376904
NZ_CP011388.1\|WP_068603938.1\|552938_554258_-\|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl\|CDD\|235648
NZ_CP011388.1\|WP_068603966.1\|573691_574192_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|376377
NZ_CP011388.1\|WP_068603942.1\|556034_557087_-\|DUF3048-domain-containing-protein	unknown	unknown	gnl\|CDD\|378618
NZ_CP011388.1\|WP_068603958.1\|568771_569461_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	unknown	unknown	gnl\|CDD\|235140
NZ_CP011388.1\|WP_068603948.1\|559690_560950_-\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
NZ_CP011388.1\|WP_068603963.1\|571066_572362_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|176464
NZ_CP011388.1\|WP_157279914.1\|547419_548931_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226350
NZ_CP011388.1\|WP_068603935.1\|550157_551576_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|223903
NZ_CP011388.1\|WP_068603952.1\|563220_563865_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
NZ_CP011388.1\|WP_082882266.1\|572366_573695_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP011388.1\|WP_068603945.1\|557268_557718_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068603961.1\|570126_571014_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|133469
NZ_CP011388.1\|WP_068603956.1\|566547_568794_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_CP011388.1\|WP_068603940.1\|554464_555916_-\|NAD-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|223358
NZ_CP011388.1\|WP_068603936.1\|551908_552814_-\|arginase	unknown	unknown	gnl\|CDD\|212515
NZ_CP011388.1\|WP_068610785.1\|558424_559024_-\|Bax-inhibitor-1/YccA-family-protein	unknown	unknown	gnl\|CDD\|198414
NZ_CP011388.1\|WP_068603954.1\|563861_564905_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP011388.1\|WP_068610787.1\|564943_566512_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223112

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_068603950.1\|561009_562587_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP011388.1\|WP_068603960.1\|569488_569737_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurS	gnl\|CDD\|376904	pfam02700, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase. This family forms a component of the de novo purine biosynthesis pathway.	3.11015e-40
NZ_CP011388.1\|WP_068603938.1\|552938_554258_-\|RNA-polymerase-factor-sigma-54	gnl\|CDD\|235648	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed.	4.28758e-156
NZ_CP011388.1\|WP_068603966.1\|573691_574192_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	6.00255e-91
NZ_CP011388.1\|WP_068603942.1\|556034_557087_-\|DUF3048-domain-containing-protein	gnl\|CDD\|378618	pfam11258, DUF3048, Protein of unknown function (DUF3048) N-terminal domain. Some members in this bacterial family of proteins are annotated as YerB. However currently no function is known. This entry represents the N-terminal domain.	4.10497e-61
NZ_CP011388.1\|WP_068603958.1\|568771_569461_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	gnl\|CDD\|235140	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ.	2.29287e-160
NZ_CP011388.1\|WP_068603948.1\|559690_560950_-\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP011388.1\|WP_068603963.1\|571066_572362_-\|adenylosuccinate-lyase	gnl\|CDD\|176464	cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).	0
NZ_CP011388.1\|WP_157279914.1\|547419_548931_+\|PAS-domain-containing-protein	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	4.8178e-176
NZ_CP011388.1\|WP_068603935.1\|550157_551576_+\|amino-acid-permease	gnl\|CDD\|223903	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism].	0
NZ_CP011388.1\|WP_068603952.1\|563220_563865_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	6.09064e-104
NZ_CP011388.1\|WP_082882266.1\|572366_573695_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	0
NZ_CP011388.1\|WP_068603961.1\|570126_571014_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|133469	cd01414, SAICAR_synt_Sc, non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. Eukaryotic, bacterial, and archaeal group of SAICAR synthetases represented by the Saccharomyces cerevisiae (Sc) enzyme, mostly absent in metazoans. SAICAR synthetase catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.	2.35681e-136
NZ_CP011388.1\|WP_068603956.1\|566547_568794_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_CP011388.1\|WP_068603940.1\|554464_555916_-\|NAD-dependent-malic-enzyme	gnl\|CDD\|223358	COG0281, SfcA, Malic enzyme [Energy production and conversion].	0
NZ_CP011388.1\|WP_068603936.1\|551908_552814_-\|arginase	gnl\|CDD\|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	2.02012e-155
NZ_CP011388.1\|WP_068610785.1\|558424_559024_-\|Bax-inhibitor-1/YccA-family-protein	gnl\|CDD\|198414	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins. This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	1.64826e-34
NZ_CP011388.1\|WP_068603954.1\|563861_564905_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP011388.1\|WP_068610787.1\|564943_566512_-\|amidophosphoribosyltransferase	gnl\|CDD\|223112	COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism].	0

>NZ_CP011388.1|WP_068603950.1|561009_562587_-|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MTIRRALISVSDKTGIVEFSEQLASLGVELISTGGTKSLLEKHGVPVIGISEVTGFPEIMDGRVKTLHPAVHSGLLAVRDNEEHQASMKELGLDYIDLVIVNLYPFAETIAKPGVSYEDAIENIDIGGPTMLRSAAKNHAFVTVVVDAADYATVLEDIRASQDNDTLLETRKRLAAKVFRHTAAYDALISDYLSKQTGEPLPERYTVTYEKVQDLRYGENPHQKAAFYREPLAASGNITTAEQLHGKELSFNNINDANAALQILKEFAEPAVVAVKHMNPCGVGIGENIHQAYEKAYAADPTSIFGGIVAANRVIGEETAMLLNEIFLEIVIAPDFTPEALQILSQKKNIRLMRLGNSEVGEGGATQQSSAKSAAPVITTVEGGMLIQDRDTLQLTEADLTVASERKPTEAELKQLLFGWKVVKHVKSNAIVLAADNMTIGVGAGQMNRVGAAKIAIMQAGDKAQGSVLASDAFFPMGDTLELAAKAGITAVIQPGGSIKDEESIKVANQYGIAMVFTGVRHFKH
>NZ_CP011388.1|WP_068603948.1|559690_560950_-|phosphoribosylamine--glycine-ligase
MRILVIGRGGREHTLVWALNKSDKVEQIYCAPGNAGIAQIAECVPIQENQFEKLSQFALDYAVDLVVVGPDDPLSEGIVDHMEDRGLPVFGPRANAAIIEGSKVFTKNLLKKYNIPTAAYETFTEYEPAAAYLQTQKAPIVIKADGLAAGKGVIVAATLEEADHALQEIMVQKVFGDAGNQVVIEEFMTGQEMSILAFVDGNTVRPMVPAQDHKPVYDGDKGPNTGGMGTYSPVPHIPQSVVDEAIRTILIPCAEAMVQEGRPFRGVLYAGLMLTEEGPKTIEFNARFGDPETQVVLSRLETDLVDIFLATVEGQLAQIDIQWSEEAAVCVVLASEGYPGPYPKGVPIHGLDEVQECAVFHAGTAMKDGGFVTNGGRVLGVVGKGADIAAARAAAYADAERIRFEGKHMRSDIAMKALM
>NZ_CP011388.1|WP_068610785.1|558424_559024_-|Bax-inhibitor-1/YccA-family-protein
MFTISILVSFAGTWVGVEFVPAWMVLPLVVVELIMLFSAFMLRRSRNRAIGYGFVYAFSFISGITIFPSVSYYANVGGSSLITSSFLLTGIIFAGLTAYAYNSKRDFSWLGGMLMVGLLTLIGLSIIGLFVGGFSGPLGLGIAGLGIMIFSGFILYDISQYRHGLSEEEIPFAVLSLYLNFINLFLYILRFFGILSSDD
>NZ_CP011388.1|WP_068603945.1|557268_557718_+|hypothetical-protein
MNRTYVFVASLVLALGHVAVSYQMLTISLLEPSILPVEADNVSAAGLGLVVIPMLVLGLHVILHLVIFAICLMRYRKKSFMFTMLLPSRGVAFLNVIRALGAVIFLVIAISLLSSNVYPLWMILYGLVVYVVYWGWVLHMVSDRLIERR
>NZ_CP011388.1|WP_068603942.1|556034_557087_-|DUF3048-domain-containing-protein
MKTISSQRQMLLALSAAFMITAAGCSNTPVAEEPAVQNETPAPTPEPTPEPTPTPPAEQFAAPLTGLGLPAALKLRPLMFMVENSPRARPQSGLDQADIVYEVLAEGEITRFLAVYQSRTVDTIGPVRSIRPYFVQLGEELDAVMVHAGWSQEAMNILKSHKLDHFDQVYGDDKYYWRDKSRKAPHNLYSSVPKIREAVTDRKKREDWVPMQLTFAPADAVPVGAPAAKVGIPYIAGYDVAYEYDAASGNYKRFMEGKPHEDRVTGKQLTATSLLIAYTDHRITDKVGRRDVDIYGPGKGLLIYRGVAQEVTWENKDGAIRAYKDGKEAGFLPGQTWVQIVPNNTKVTLE
>NZ_CP011388.1|WP_068603940.1|554464_555916_-|NAD-dependent-malic-enzyme
MNPTTLIQSQSSYSGKSVILRLEFNSESTKFGQVASLISENGGDIVAIDIISGNKSISVRDLTVNVSDTADIDRITEALGRTPDVKLVHVSDRTFLLHLGGKISITPKTPIQNRDDLSRVYTPDVARVCLAIKDDPQKAHTLTVKRNMVAVISDGSAVLGLGNIGPHPAMPVMEGKAMLFKQFADVDSFPICLDTQDTEEIIRTIKHIAPAFGGINLEDISSPRCFEIESRLRQELDIPVFHDDQHGTAVVLYAGLINALKIVGKDIHDLKVVVCGIGAAGIACSKILLAAGVKNLLGVDVEGILNANDEYANPMKQWYAANTNPDRVSGDLRDALRGADVFIGLSRGNLLNRDDIRTMAKDPIVFAMANPTPEISPEEIEDIAAVIATGRSDYPNQINNVLCFPGMFRGALDCRASDINEEMKLAAAEAIASIIKPDELNKHYIIPSVFNTDIVRSIRKQVIEAAIRTKVARRIPREFNSQN
>NZ_CP011388.1|WP_068603938.1|552938_554258_-|RNA-polymerase-factor-sigma-54
MQAGAGLQLEQGLKLSITPEMHQSIHMLQLSNSELSDYLYEQANDNPLLNVQEPKHRSIFLKQNRKKSPSATQVKPDVMHRIPAYEHTLEDSLVSQLRMSHLPQEVFRAAVYMAGNLDDSGYLDVTTEQVAVALSMDSEMVEEALRQVHRLEPAGVGARDVSECLRIQLEWKAVVPVGAREIVCGYLTLLAQGRLDRIAAELGISLDQVKEAVAMIRKLDPRPGLALTPQRNVYVVPDARIEVQGEEITILLLKGSLPKVTINTEYASMAEQIRCQPTVTYLKEMTRAASVVLRSMEHREETLYRVIQAIMQEQEGFVTGGVEGLKPLKLKQIAEQLGLHESTVSRAVMNKFVETPRGVVPLKFFFSSGLQTSGGEAASSVTVKAKIRQLIDTENKIKPFSDQKIVDVLDRDGIQLSRRTVTKYREEMHILSSVLRKTM
>NZ_CP011388.1|WP_068603936.1|551908_552814_-|arginase
MMSTETKALSILSVPFGYGAGRRGTEFGPEAIRLAGLNRQLKELGFHIDKEVTLPVPSESGETHPNLKYLNEIIELNTNLAAEVAGVVNQGAFPLVLGGDHSIAIGTLGGLVQKYKNLGVIWFDAHADLNTEETSPSGNIHGMSLGVAMGRGPSLLTQIKGAGPNLKPENIVLIGTRQLDQGERDFIRSSGIKCFTMHDIDRKGMSAVMDEALAIVTNGTDGVHLSFDIDSLDPLEAPGTGTKIPGGVSYREAHFALELMCESKKITSAEFVEVNPSLDSGNKTARLAVELIASLLGQRIL
>NZ_CP011388.1|WP_068603935.1|550157_551576_+|amino-acid-permease
MITQTDQPNELKRTMTSRHMFMISLGGVIGTGFFLGSGYTIQQAGSIGAILSYMVGGFIMYLTMACLGELSVHMPVSGSFQTYTSRYIGRATGFTVGWIYWLGWAVTVALELLASGQLMQRWFPTVDIWVWCLVFGAFLFILNALSARSFGEAEFWFSSIKVIAILLFIILGLGVMFGLVPMNGGAAAPMFSAFTNENSWLPNGWTGLILTMITVNFSFQGTELIGIAAGESEDPEKTIPRTIRMAVWRTLIFFCLAIFVLAALIPWEQAGVIESPFVMVFESIGIPYAADIMNFVILTALLSVGNSGLYAATRMLWSLSKENNLNPVMTRVNRRGIPVNSLMLTMGIAFLSLLCSVVAADTVFVWLISLAGLGAQVGWIAITASQLAFRKKYIASGGKLKDLKFRTPLYPYLPLLGLTLNILVLVSLAFDKDQRIALYCGIPFAALCYLYYFFFVKGKTARAKTVAEKNML
>NZ_CP011388.1|WP_157279914.1|547419_548931_+|PAS-domain-containing-protein
MLSLYRSVTDKINEGVHVVDESGRSLIYNAKMTELESMSRDHVLWKPLEEVFQFSGDQESTLLKALNTGQPVQNVRQTYFNDKGKKITTLNHTYPILEEGRVIGAVEIANDVTKLERLVRGTMLEGKGEGGLRYDFASIVGPSAALREVIRHGERAARTSSSVLVAGETGTGKELFVQSIHQASARAERPFISQNCAALPDTLIESLLFGTAKGAFTGAVERPGLFEQAEGGTLFLDEINSLGLALQAKLLRVLQEKALRRVGDTRDRAVNVRVIAALNEDPITAVTEGRLRKDLYYRLGVVVLMIPPLRERPEDIMPLVRHFIAKYNALFQMQVTGVDTEAERFLLGHDWPGNVRELQHVIEGSMNLMDDESLIGMDHMPIYHASRVVKALAAGLPADGRSSATGSVPVTGGIDAASSKLTTGTSPSNTGSTDGLMADLHEIKPLKQKLEEFERTYLQQVVALQGGNISRAARELGISRQSLQYRLKKFQPSHQTQQQQTQN
>NZ_CP011388.1|WP_068603952.1|563220_563865_-|phosphoribosylglycinamide-formyltransferase
MRRRGKLKLAVFASGNGSNFQAIADAIAAGKLDAHIELLVCDKPQAPVAARAHALGVTVHAFDPKAYPSREAYEREILAALEGARVELIVLAGYMRIITSTLVTPYFGRMINVHPSLLPAFPGIRAMEQALDAGVRVTGVTVHFVDGGMDTGPIIAQRPVSIEDGDTAATLAARLQPVEHELYPQVIGWIAEGRVRLNAESREVWVDIPVAYEH
>NZ_CP011388.1|WP_068603954.1|563861_564905_-|phosphoribosylformylglycinamidine-cyclo-ligase
MSDAYKNAGVDIAAGNEAVERMKKHVKRTMRPEVMADLGGFGGLFALNKDKYEEPVLVSGTDGVGTKLKIAFAMDKHDTIGIDAVAMCVNDIVVQGAEPLFFLDYLACDKVIPEKIEAIVKGISDGCFESGCALIGGETAEMPGMYSEGEYDIAGFTVGIVDRKKMIDGRSIAPGDAVIGLASSGVHSNGFSLVRKLLLEQHGYSLQDEVAELGGAKLGHVLLEPTKLYVRSVLELIKQVEVKGLAHITGGGFIENIPRVLPAGVNVDIEYGSWPILPIFQLMQDKGEISHRDMFRTFNMGVGMVVVVPAKQASEALRIARELGEDAHLIGRVTPGDGVVTFTGATV
>NZ_CP011388.1|WP_068610787.1|564943_566512_-|amidophosphoribosyltransferase
MNVALAERSSERNLDRAGVSGSEKRSDRNLDAEHNTDRHPGWTGDYYNQGAGPDGIFDKLKEECGVFGIYGHSEAAALSYYGLHALQHRGEESAGICASDGGAQFNYHRGMGLVKEVFNNDIMDTLKGSITIGHVRYSTAGESKLANAQPLVFKYRGGDLAIATNGNITNALDIRAELEQLGSIFQTTSDTEVIAHLIARSTESDIVQAMKNALNRLIGGFVFLIMTNDRMFVAADAHGLRPLSIGKLGDAYVFASETCALETVGAQWVRDIEPGELLILDKDGLTEDRYTDMNRRAICSMEYIYFARPDSDINNVNLHSSRKRMGQQLALESFAFADVVTGVPDSSISAAIGFAEQTGIPYELGLIKNKYTGRTFIQPSQELREKGVKMKLSAVRKVVEGKRVVMIDDSIVRGTTSLRIVNMLREAGATEVHVRISSPPFINPCFYGIDTPDRKELIASSRTVEEIRQAINADSLSFLSKEGLMEAVGIHEGEMNRGMCFACFDNDYPTVLPENAKEGCGC
>NZ_CP011388.1|WP_068603956.1|566547_568794_-|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MAQQLTTKEPTAAQIAEQKLYQQMGVKDDEYAKVCGFLGRQPNYTEIGVFSVMWSEHCSYKNSKPVLRKFPVTGERVLMGPGEGAGIVDIGDNQAVVFKIESHNHPSAIEPYQGAATGVGGIIRDIFSMGARPVALMNSLRFGKLESERVKYLFEHVVSGIAGYGNCIGIPTVGGEVMFDESYEGNPLVNAMCVGLIDHDKIQRGVAKGVGNPVFYVGPATGRDGIHGATFASEELTEESEAKRPAVQVGDPFMEKLVLEACLELIDTGIVLGIQDMGAAGLTCSSAEMASKAGNGMLLDLDKVPQREVGMTAYEMMLSESQERMLFVVEPKDEAQAKEIFERWGILCEKVGTVTDDGRLKIMQHGEVVADMPVYALVDECPVYNKPSQVPAYYEANASVDTNRYEEVTDVTGALKKVLASPTVASKEWVYSQYDYMVRTSTAVQPGSDAAVVLVPGTRKALAMTTDCNSRFVYLDPEVGGAIALSEAARNIVCSGAEPLAITDNLNFGSPEKPEIFWQLEKSVDGMAEACRKLNTPVIGGNVSLYNENARGAIYPTPVVGMVGLIHDTDHITTQGFKSEGDVIVLLGETRAELGGSEFQYAVHGVTEGRPPALDLDVEKKLLDGVLDAIQAGLVASAHDLSEGGLAVALAESCISGRVGASVEFAAAGLRSDIAMFSESQSRILLSVAPANVDALKAKFEGAGVPLQVIGTVGGTDLQVKVNGAAVIDAKVEQLEQVWKDAIPCLMQ
>NZ_CP011388.1|WP_068603958.1|568771_569461_-|phosphoribosylformylglycinamidine-synthase-subunit-PurQ
MHFAVIVFPGSNCDIDCYKAVQDVGESVDYVWHTETDLSKYDAIIVPGGFSYGDYLRCGAIARFAPVMNEVVKAAEAGKPIIGICNGFQILLEAGLLPGAMRRNESLKFRCHSTKLRVENNATPFTSEYAAGEEINIPIAHGEGNYYCDDETLARLKANNQIVFRYAGENPNGSVDDIAGICNEAGNVLGMMPHPERAMNQLLGSEDGVRMFKSILNTWRERHGAAVNN
>NZ_CP011388.1|WP_068603960.1|569488_569737_-|phosphoribosylformylglycinamidine-synthase-subunit-PurS
MLKATVYVTIKQNVLDPQGSAVQGALHSMGFAEVGSVRIGKYLELQLDTADQGEAEARVKAMCEKLLANTVIEDYRYELQAV
>NZ_CP011388.1|WP_068603961.1|570126_571014_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MNATAIDTAQPYVNVPLLYKGKVRELYDLGELFLIVVTDRISAFDYVLSPAVPDKGNVLNLLSKYWFKQTEGIIRNHVVHTDVDKLGELITAEGRDVLRDRIMVTRKAERIDIECVVRGYITGGGWRQYQQNGEVNGIPLPEGMRKNQRFETPLFTPAAKNDVGHDEDISVDQMKEMVGVALTEQLEEKSIELYEFARAYCEKRGIILADCKFEFGMVDGELILIDEIFTPDASRFWARENYALDIEIDSMDKEPVRTYLAGSGWDKNSEPAPLPASVVEETSRRYKDILGRLTV
>NZ_CP011388.1|WP_068603963.1|571066_572362_-|adenylosuccinate-lyase
MLERYSRPEMTAIWTEENKFKAWLEVELCACEAWAELGVIPKEDTVELRKNAGFDINRINEIELETRHDVIAFTRAVSETLGPERKWVHYGLTSTDVVDTALGYLLKQANGILEKDITNFIEILKNKAIEHKDTAMMGRTHGVHAEPTTFGLKLALWYEEMKRNLERFQHAANGVQFGKMSGAVGTYANIDPQVEAIVCRKLGTTPAPISTQTLQRDRHAEYMATLALVATSLDKFATEIRALQKSEFREVEEAFAKGQKGSSAMPHKRNPIGCENISGLARVIRGHMISAYENVTLWHERDISHSSVERVILPDATILLNYMLNRLGNIIKNLTVFPENMKRNMQSTYGVPFSGRVMTKLIDKGMSREQAYDTVQPQAMLAWEEQRSFRDIVEANEVIGEHLSAEEIADCFNPAWHLKHVDTIFKKLELI
>NZ_CP011388.1|WP_082882266.1|572366_573695_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MSEARADVSEAAGLSGAGVSSGADVSGAGVSSGAGVTEERDIRGAAGQAGGAERVIPPGSTIGILGGGQLGRMLALTGSAMGYRFIAMDPTPDAPCGQVSEQIVASYGDAQAARELARRSDVITYEFENVDADVAAMLTGESYVPQGSKLLHTTQHRLREKRAIEAAGVKVAPYAEVRSADELREAVARFGTPCVLKTATGGYDGKGQWVIRSADEIEDAFNTLSQAKTELVLEKFIDFSMELSVIAARSPRGEVKAFPAAENVHVDNILHLSIVPARVSPEVAARAEELAVRIASSMEAVGLLAVEMFVTQDGELYVNELAPRPHNSGHYTMEACVTSQFEQHIRAVCNLPLGSTDLLTPVVMVNVLGEHVEPIIRHFGADPVQTTNTINTTDQDQAAHPKLHLYGKAEAIAKRKMGHVNVLAKSTDAALQWIEKTNIWRT
>NZ_CP011388.1|WP_068603966.1|573691_574192_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MTARVGVIMGSQSDWETMKGACGVLDELGVPYEKKVVSAHRTPDLMFQYAETAIERGLQVIIAGAGGAAHLPGMVAAKTELPVIGVPVKSSSLNGLDSLLSIVQMPGGIPVATVAIGPAGAINAGLLAAQILGASDKDLQRKVRERRERTRDAVLETSDKLGAVEL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011388_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_2

680028-680213

Orphan

Consensus_repeat	Method
CATTTGTAGCGATAACGCTACTA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP011388_2

>merge|NZ_CP011388|2|680028-680213|CRISPRCasFinder
CATTTGTAGCGATAACGCTACTAATCCGCCTTGACCAAGTAACACCTAGGACATTTGTAGCGGTAACGCTACTATTTCGATTCTACCTTCCAGTTATCACGCACTCTCTGGTCATTTGTAGCGATAAAGCTACTAATCCAACCAACCCAAGTAACTTCTACGCCATTTGTAGCGTTATCGCTACTA

>NZ_CP011388|2|2|680028-680213|CRISPRCasFinder
CATTTGTAGCGATAACGCTACTA	ATCCGCCTTGACCAAGTAACACCTAGGA
CATTTGTAGCGGTAACGCTACTA	TTTCGATTCTACCTTCCAGTTATCACGCACTCTCTGGT
CATTTGTAGCGATAAAGCTACTA	ATCCAACCAACCCAAGTAACTTCTACGC
CATTTGTAGCGTTATCGCTACTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_068604146.1\|688767_689646_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP011388.1\|WP_068604116.1\|666217_666829_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP011388.1\|WP_068610807.1\|666848_667523_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_157279917.1\|685809_687528_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270298
NZ_CP011388.1\|WP_068604135.1\|678796_679810_+\|NADPH-dehydrogenase-NamA	unknown	unknown	gnl\|CDD\|184110
NZ_CP011388.1\|WP_068604152.1\|692171_694754_-\|DUF4962-domain-containing-protein	unknown	unknown	gnl\|CDD\|271148
NZ_CP011388.1\|WP_068604125.1\|671071_672445_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP011388.1\|WP_068604131.1\|674968_675598_-\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP011388.1\|WP_068604139.1\|682309_683956_-\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP011388.1\|WP_082882273.1\|675768_678717_+\|DUF3376-domain-containing-protein	unknown	unknown	gnl\|CDD\|274676
NZ_CP011388.1\|WP_068604123.1\|670311_670626_-\|metal-sensing-transcriptional-repressor	unknown	unknown	gnl\|CDD\|197387
NZ_CP011388.1\|WP_082882274.1\|681436_682297_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP011388.1\|WP_157279774.1\|670732_670900_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068604141.1\|683948_685679_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225519
NZ_CP011388.1\|WP_068610809.1\|687812_688730_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP011388.1\|WP_068604147.1\|689865_690912_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226678
NZ_CP011388.1\|WP_157279775.1\|673429_674005_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068604136.1\|680411_681350_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372911
NZ_CP011388.1\|WP_068604126.1\|672565_673387_+\|class-D-beta-lactamase	unknown	unknown	gnl\|CDD\|225322
NZ_CP011388.1\|WP_068604150.1\|690908_691979_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226678

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_068604146.1\|688767_689646_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.77693e-62
NZ_CP011388.1\|WP_068604116.1\|666217_666829_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	4.76599e-17
NZ_CP011388.1\|WP_068604147.1\|689865_690912_-\|hypothetical-protein	gnl\|CDD\|226678	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only].	1.33814e-73
NZ_CP011388.1\|WP_157279917.1\|685809_687528_-\|extracellular-solute-binding-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	3.38408e-116
NZ_CP011388.1\|WP_068604135.1\|678796_679810_+\|NADPH-dehydrogenase-NamA	gnl\|CDD\|184110	PRK13523, PRK13523, NADPH dehydrogenase NamA; Provisional.	0
NZ_CP011388.1\|WP_068604152.1\|692171_694754_-\|DUF4962-domain-containing-protein	gnl\|CDD\|271148	cd04082, CBM35_pectate_lyase-like, Carbohydrate Binding Module family 35 (CBM35), pectate lyase-like; appended mainly to enzymes that bind mannan (Man), xylan, glucuronic acid (GlcA) and possibly glucans. This family includes carbohydrate binding module family 35 (CBM35) domains that are non-catalytic carbohydrate binding domains that are appended mainly to enzymes that bind mannan (Man), xylan, glucuronic acid (GlcA) and possibly glucans. Included in this family are CBM35s of pectate lyases, including pectate lyase 10A from Cellvibrio japonicas, these enzymes release delta-4,5-anhydrogalaturonic acid (delta4,5-GalA) from pectin, thus identifying a signature molecule for plant cell wall degradation. CBM35s are unique in that they display conserved specificity through extensive sequence similarity but divergent function through their appended catalytic modules. They are known to bind alpha-D-galactose (Gal), mannan (Man), xylan, glucuronic acid (GlcA), a beta-polymer of mannose, and possibly glucans, forming four subfamilies based on general ligand specificities (galacto, urono, manno, and gluco configurations). In contrast to most CBMs that are generally rigid proteins, CBM35 undergoes significant conformational change upon ligand binding. Some CBM35s bind their ligands in a calcium-dependent manner, especially those binding uronic acids.	1.19763e-45
NZ_CP011388.1\|WP_068604125.1\|671071_672445_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	7.538e-121
NZ_CP011388.1\|WP_068604131.1\|674968_675598_-\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	3.58215e-68
NZ_CP011388.1\|WP_068604141.1\|683948_685679_-\|HAMP-domain-containing-protein	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.07609e-37
NZ_CP011388.1\|WP_082882273.1\|675768_678717_+\|DUF3376-domain-containing-protein	gnl\|CDD\|274676	TIGR03607, TIGR03607, patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown. [Unknown function, General].	8.90374e-39
NZ_CP011388.1\|WP_068604123.1\|670311_670626_-\|metal-sensing-transcriptional-repressor	gnl\|CDD\|197387	cd10152, SaCsoR-like_DUF156, Staphylococcus aureus copper-sensitive operon repressor (CsoR), and related domains; this family was previously known as part of DUF156. This domain family includes Staphylococcus aureus CsoR (SaCsoR). SaCsoR is Cu(I)-inducible, and regulates the expression of genes involved in copper homeostasis; it represses a genetically unlinked copA-copZ operon. copA encodes a copper efflux P-type ATPase, and copZ, a copper chaperone. This family belongs to a larger superfamily that contains various transcriptional regulators that respond to different stressors such as Cu(I), Ni(I), sulfite, and formaldehyde, and includes Mycobacterium tuberculosis CsoR (MtCsoR), Bacillus subtilis CsoR, and Thermus thermophilus CsoR. The latter three proteins do not belong to this family. CsoRs form homotetramers (dimer of dimers). In MtCsoR, within each dimer, two Cys residues on opposite subunits, along with a His residue, bind the Cu(I) ion (forming a triagonal S2N coordination complex, C-H-C). These residues are conserved in the majority of members of this superfamily, including this family, and a conserved Tyr and a Glu residue that facilitate allosteric regulation of DNA binding for CsoRs are also well conserved.	1.05831e-39
NZ_CP011388.1\|WP_082882274.1\|681436_682297_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	5.87903e-30
NZ_CP011388.1\|WP_068604139.1\|682309_683956_-\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.24978e-46
NZ_CP011388.1\|WP_068604136.1\|680411_681350_+\|hypothetical-protein	gnl\|CDD\|372911	pfam14099, Polysacc_lyase, Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll.	9.92143e-12
NZ_CP011388.1\|WP_068604126.1\|672565_673387_+\|class-D-beta-lactamase	gnl\|CDD\|225322	COG2602, COG2602, Beta-lactamase class D [Defense mechanisms].	1.69476e-82
NZ_CP011388.1\|WP_068604150.1\|690908_691979_-\|hypothetical-protein	gnl\|CDD\|226678	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only].	6.11386e-61
NZ_CP011388.1\|WP_068610809.1\|687812_688730_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	2.01893e-130

>NZ_CP011388.1|WP_068604135.1|678796_679810_+|NADPH-dehydrogenase-NamA
MSLLFEPYTLQGMTLKNRIVMAPMCMYSCEDRDGRVTNWHRTHYTARAVGQVGLIIVEASAVTPQGRISEQDLGIWSDEHVDGLREITNMMHAYGAKAAIQIAHAGRKSTVEGPIIAPSAIAFDDSYRLPEAMTTEQIQETLFAFREGARRAKEAGFDCIEIHGAHGYLINEFLSPLTNKREDEYGGDRDNRYRFLEETILAVKEVWAGPLMVRISANEYHADGNTLDDFIYYSQRMKEQGVDLVDCSSGGVVPASIQPYPGYQVPLAEAIRRGADVPTGAVGLITSGVQAEEILRKEQADLVLLAREFLRDPYWPRTAAKELGVEIEAPKQYSRGW
>NZ_CP011388.1|WP_082882273.1|675768_678717_+|DUF3376-domain-containing-protein
MQKKEPNPPRRMCSTLEILPDWSDVMTGSKNLAQGELDEAVANVPPREIRIGLVLYGGVSLAVYMNGVVQELLALVRARRGAEADQETADAGCAYGELLDRLGSEVIIDIVAGNSAGGINGVLLAKALATGTDLKSVKPLWRDVADLKYLLDLRGGEQDALLNGEYMYQKLLGCFEELSRQAELEPGLTAERRKQIAMLDLFVAASDIRGRRWSWTDGKGQEIEGLRHGVTLHRKYRTLYGGDDSGDADCESRNGIDRDVVSEDCGGGDGEQDSGGDAGSGSGGDVGRNKDQEGKRLGYGRTRGYMHNDFQGAAQDDLLARMARATSAMPGAFPGQAFTMEEVYGAKNTYDQRDTVYLHDGLLTDNRPFRPVLETVMGRAADRQVDRWLLYVDPTPVDTHLSMTMDAYRAKPNVMEAALSYFGVPRYQSIYEQLKAIEAYQCDVDTLGGVLDLLEGKNALTRREVDEGKGTMSGNDDGDGAGGKGTISGNDVSSGAEGTSAKSKTSIGVEALTALPGYLPYCRLRIERLEQDLLGGARAYFGKHGDFREAADREGAPLAALRAALWRMRADAGTLVAGMAMPDVEFYARFFLYHVKKINRALDDPGNAAAAQRKRLLARKTALWGAVDSLRQQAWLWWHLERELAALQRRLALAPPGSALAAQTRAAIDRLQAELPRHRPLIEALDRLYRGDDPRQAAEQVMHFVEHAVHHCLLNLEHPALILEAVAPQTRDPDAGPAPHVHGAEFTERLQSALLEFLAVDLFLYPLTYNAVGELNPTALVRISAGDAATLGLSGSDKLVGEDLQAFAGFLSPRWRANDLMWGRLDTADILLNYMDRTFQQRLNPDDSDTGAKLADWNAFLLRTRLNHFVTIIKEEIPYVDPKLAELFHSILEAFPGLSDDEERLHELRVFFAERYKVGRETWLHLPLSVTAGNAMDMLHNASAALKGHFRKAPIPLILLWIAGIGIDLVRLLIRIILPRKK
>NZ_CP011388.1|WP_068604131.1|674968_675598_-|NAD(P)H:quinone-oxidoreductase
MSKILIVYYSAHGHVFEMAKAVAKGAEGVQGTEVRIVKVPEFDAVKEAMSKDDVYIQSQKKQADIPEVTHEDLKWADGILWGVPTRYGIMPSQMKSVLEAAGSLWQSGALEGKPTGVFTSTGSIHGGQETTAVTTFIALMHFGMIYVGLPYGENPEQLTTEGIGGSPYAASTVAGPKDERQTTEPEFTMAGRLGARVAKVAEALRGLNS
>NZ_CP011388.1|WP_157279775.1|673429_674005_+|hypothetical-protein
MLIKISRRSNRRFAGILAGVVILAVISAIVALYIYITVAPEQIGYARVDSTPLTEEHIGPYKIGNSIYDGKSPPTAAEPTANNEGRDVYAAGDGLYLYTTTGDYDIMDMTVRDPGHTTSKGITVGSTREDIRTAYGREYSKRSEQGADIMVYYDKSHAQALEFWLWEDKVAEVRWKTHYVFKSPPAILRYL
>NZ_CP011388.1|WP_068604126.1|672565_673387_+|class-D-beta-lactamase
MKKVNLMILMLISLLVVSVIHPVSSNAGNAESKRLQVDHLFQTTDGTIVIKNLRTDKTYTYNPERSETRYTPESSFKIPNALIGLEEQAVADEYEVKRWDGVVRAFETWNRDHSLASAMRQSAIWFYQDLARYIGPVAMQRHVDEMQYGNRDISGGIDTFWLNSSLKISAREQVDFIEDLVEETLPVQKQHMKTVKRMMIAEEQDEYTVHGKTGTRLSDMGLGWFVGYVETDKDTWVFATNVDSSGTVARNITMDCLEDLFLSTNAQEIAGNL
>NZ_CP011388.1|WP_068604125.1|671071_672445_-|PLP-dependent-aminotransferase-family-protein
MRKYAQIICDMEERIQQGFWKPGDKLTSIRTLSADYNCSMNTVIKAYSELERKHRIYAVPNSGYYVVEGGSTGAVDNGNTSRIDFLSAGPDKEAMPYRDFQHCMNQAIERYQEEMFTYSEPQGLYSLRQQLARHLQDLQVFTVPERIWVVSGSQQALNLFVSLPFPNGRTNICLEQPTHMSFIQSVQHHDVEAYGIEVSGAGVDLERLEHIFAHHQIKFFYMVSRFHNPTGHSYTNEDKRRIVELARQYDVYIIEDDYMGDLDVNLKQDPLYAYEPSGRVIYVKSFSKVMLPGLRLGLAVLPEAMNESFRRAKFAADLHTPLLMQGALEIYLKSGMFQAHIQRMRELYRGKAILLQEAYKKHLPAVSALYSEALSGFYSTIELPRGIKAKELIQHLMQENVEVDEVEKMFLPAFAKDTMIRISVSQVREDLIEQGIRNIAEGIRGLCERKHEVVVFK
>NZ_CP011388.1|WP_157279774.1|670732_670900_+|hypothetical-protein
MMSHALYERQQATIELYQQLAVAEKESLDPAITKINHTDLMKKLRSRIHGETSSD
>NZ_CP011388.1|WP_068604123.1|670311_670626_-|metal-sensing-transcriptional-repressor
MEPNDMKDHCGTERKSHHSDKTKANLVSRLNRIEGQIRGVKGMIEKDTYCDDVLNQLASIQSALNGVGKLLLENHMKTCVTERLHAGEDEVIDELLTTIQKLMK
>NZ_CP011388.1|WP_068610807.1|666848_667523_-|hypothetical-protein
MWKLSASSPKPQEELTLTIELRDHEEKAIEQFDINHEKKMHLIVVSEDLSYFDHIHPEYKEAGTFEVTTKLPAAGKYKVIADFIPTGMGSMTQTEWITVAGEAPQQKAMEPESELTKVVNGKEIALNIDHLMAGMDANLSFHIRRADDQTPVSDLEPYLGAVGHVVILSADTEQYLHVHPTDERATGPEANFATSFPKSGVYKIWGQFQHQGEVFVVPFVVEVP
>NZ_CP011388.1|WP_068604116.1|666217_666829_-|TVP38/TMEM64-family-protein
MVTKKLLILSYFILIVAAIAYREPIVTWLSQEEEVQLLPITLLAILLGLVPVIPFGVIAAVIGAKFGFLAGGLLNVFASTAAAVIMFAIVRYVMANAARSRISRSAKLSELTAKFETRPFLPLLFARLIPILPAQAINTYAAISRMSFLTFLTATVIGKVPVMITFAIVGDQLFSNWRNAVIVLTVYVVFLLMVWFIYRRWRE
>NZ_CP011388.1|WP_068604136.1|680411_681350_+|hypothetical-protein
MKALKRTRFALTALTLLTLGTSMTSASSYQLQDTFNTGTVKDYNVLEGWYQYLETDPNQPVQAIGASGSNTMGSYSVVPKPGDTGTDKALKLVLKANQEHPAGTYPNGDPKYKSRFEFRSKGIAPSDPTSTDTAERWYMFDFMIPTDWDETDGWQNFIVQVYYGDGSIGRGPSLGITLSNDDMRINGNNFCNEDTSPGTAVTTLCSDPSARDERELYSEQMIKGVWQRFWVHIKWSKVNPSKGIIELKRSTDGTDPTTKGLLFPAVRGVNTVGSKSNYFKIGNYLGVGWNDRDPALNKDKVMYYDNVRISKP
>NZ_CP011388.1|WP_082882274.1|681436_682297_-|helix-turn-helix-domain-containing-protein
MRMRAQTEPFQHLYRHAFMLDHKKDGAYPENYHLHPGYELIWVVSGDAWFMMEDQVIQISSGSVLLFRGGTYHKLKKLGRGCYERKIIHFLPEFIPGGEGVFREELDQLTAHCHHVRLSKQESAECQRMFNALQNEQQAVPRWGGKMAMQVYLMELLLFIGRKEHMGNEGAQPWQHAPGGITLSRILEHLNAVWNSPCQLDDIAEALHMSKYYLCHFFKKEMGISIQHYLMERRIHEAAQLLVLKDMTVKEIGFEVGFQTSSHFGRKFKETLGVTPEQYRLNFLSK
>NZ_CP011388.1|WP_068604139.1|682309_683956_-|response-regulator
MYSLLMVDDEAYVVDSLAVTIPWADLDVSQVFKAYSANEALLIMEQHTIDIVISDIRMPVMSGIELLERISTDWNRTRCILLSGHADFAYAQAAIQHQTADYLLKPVSDEDVMAAVRKVTSQLKQEWEEISSHQRAVYTINENLPLLKGNLLNDILQGRRYSQDALADKMRLLHIPFESEEPFALLLIRMGEEFQQHDAYHLALLEYAVTNIAEEISKSHYHLWTCKDAHDDLVMVLKSIGDDQRGAGGESSGDETGRQRQIERIAEQLQVNVKLYLKGGISVIVGGWGSFPAHVPALYQAAVSALRKGVGTSGDLFMTLPDQSVPVPINAVQSLYEPPLLIHLFEAGRWDAACEKLESVFQELEQEWQDSTEHLFEVFHTISASLSYIAHRNGTQLHEIIGHDYEKVLSGNSFRHVKPLKEWSFRSIHAIKESMQRESRDTRVSVIQRVQEYVEHHLADISLQSIADWIGLHPVYLSKVYKQETGENISEYIFRLRMDRAALILKKGDDKVYEIAKDLGYQNVPYFIKVFKKQYGLTPQEYRENTPT
>NZ_CP011388.1|WP_068604141.1|683948_685679_-|HAMP-domain-containing-protein
MNVTNNIFNKIMILILLLLLPILGLYTYSNQVSVKVIKDELESSSMSRLQFLLNQVETNLEQFGLFSTILSRETSILDYKTIHLMENVYKRIELQKEVAQKLELQSASVNWDNQISVYSIPAQEVTSTYFRIYDAAYLKRNVSDRWTLRTTEVEGQQIQQFVKFTLNPVSAYMDFSKADLVVEVSFYVNNLVRMLNDFKKGAKGDPFFYHPDYTPIVNHTSDADKIYDIQKKLHILSLTDAGRTTLNLGGEEYQVYYVKSPDLGWYLVDYVPVQEILSPVIENRNYFYMTTGLLLTMSLTAAFLLYRNVRVPIRELTKGVQSLKRGDYSVRLTHKFHNEFDYLFLRFNEMTMQIQELIENVFAERLRSREATLKQLQAQINPHFLYNCLFFIKSMASMGNDKAVISMSLKLGEYFRYTTRVEKDYASIADELKLVTNYLEIQMLRSPRFEFETDLPEDMLNMEIPRLLLQPIVENAVIHGLEGNPNAGMIKITGEIQAECYRLIVEDNGLGVTPDRLQELRDGLNDALEDEMGCGVWNVHHRLIYRFGEGSGLVLEPVDPQGLRVILQWNRGPEHV
>NZ_CP011388.1|WP_157279917.1|685809_687528_-|extracellular-solute-binding-protein
MRNKSLILLLSLVLMLGLLAACNNSNSSSEQPKETAPGNTAAENDGNASKGDGKHSAPFSGGKYDPPITITTVRGIDASVKFKNNETMDDNVHYKWAKEKLGIEIKNLWTANYANDGFNTKLRLALSANKELPDILVVGQEMGSELIESGKFMEVDELFEKYASETYKKAMADDPNVWLPYMKDGKKMGIPDLEYEMHNDAVLWVRQDWLDKLGLKAPTTIDEMEKVMDAFVNQDPDGNGKKDTYGLALGIKEGLKQNMGEARFIFGAYGTIPNQWNLNEDGKLEYGSVQPEMKPALTKLSEWMKKGYLSEQAGLLGSMEAGSEFTSGKVGIISGPHYMPEFPLPDLYKNNKDAVVKPYPLPTGPDGLAGRSSSGAGGGVVLINKDFKHPDAFFEYQNYLFDNFANPEFGSQFEWGLAEGYDWAKVNGEPTTKADEIPGGNGTVSKYLLTPDGIRIPSLRMETYAKLAKDPAPASPVERFLLKKPEGVIEAATIVLSQKDIAKQNLFVGPPTKTQKMRGDFVDKLELETINKIIYGEQPVDSFDTFTEKWMSSGGKQISEEVNEWYTSVQGK
>NZ_CP011388.1|WP_068610809.1|687812_688730_+|sugar-ABC-transporter-permease
MKTARVKHRWNFKSTWPLHLMVLPPLLLIIIFHYVPMLGLVMAFQEYKPWTGFTGSPWVGLDHFKFMLEYPDSKQVIWNTVLIASLKIVTGLIVPIIFALFLNEVRKMAFKRVIQTLVYLPHFLSWVILGGILIDMLSPEGGLVNRALGWVGIEPIFFLGNGDWFRFTVVTSDLWKDFGFSTIVFLASLAGINPSLYEAAEVDGASRWKQTLYVTIPAMIPITIVVGTLALGNVLNAGFDQIFNLYNPLVYEKGDIIDTFVYRLGIIDGNMSFSTAIGMFKSVISFVLIVIAYRLAYKYANYRIF
>NZ_CP011388.1|WP_068604146.1|688767_689646_+|carbohydrate-ABC-transporter-permease
MYYKTPTYRLFSIFNYTLLAIIGLLCLLPLVHILAVSLSGKAAANANMVALIPIDFTLDAYAKTLDNDNFISSLWVSFKRTILGTASIMLMITLAAYPLSKDDSVFKGRSIYTWVFVFTMLFSGGLIPSYILIQKLHLMDSIWALILPGAVNVWSMILLLNFFRGVPKELEEASKMDGAGHLRTLWSVYLPVSMPAIATLSLFSMVFHWNSWFDGLIYMSDGSNYPLATFLQTVIVQLDFDNLSMNPEDLENISNRTVKAAQIFIGALPVLLVYPFLQRFFVKGIVMGAVKE
>NZ_CP011388.1|WP_068604147.1|689865_690912_-|hypothetical-protein
MNVLTTSTTDLQVLVRKVAERAIFADIVKRWDWGEGVALAGVTRAHALTGDQTLMFAQSWINDQLSLNYPVWNVNRSALSVTLLHLYTITQDERYLNACEENINYLLNEASRVGKGAIEHTVTLNVWPKQVWADTLFMAGIFIGKYGKLTGNTELVDACAEQFVYHLDYLSAADGLFYHGWNEVNRNHMSAVKWARANAWITVTCAEVLTDILTPEHPLYGTIAERYRQQVDALLPLQDAETGFWHTVLDDPAGYLETSASCGFAYGILRGIRAGLLDESYRSVVEPTFYQLVNHQIDDYGTVHGVSAGTDIYESAADYNAVPIHLPHGWGQGLALYLITEWIEDQRS
>NZ_CP011388.1|WP_068604150.1|690908_691979_-|hypothetical-protein
MNANVMQPADLQESANRVWEKMSKPHEEWNFNLHYWEWETGVGLMGMIKAYETSENADMLEYIKNWAAENKGKRRFYSVNWVAPANVLLFMHRLTGEEEYIEACREYSDWCVHQALRTSNGGFAHVWKGGQEDYKNQLWIDTLFMSGIFMLDMGVYDNDQACLEEGLRQFDIHIESQFDPSCDLFYHGYHCLEQKPLGQHWGRGNGWAAVSLVELLRIVATSSSSYDLSRYEEMFTRLMNSAYDLRMEDGMLRTLLDVQEEASYVEVSASALFAYAAIRGVKQGLLEPKFMAWAQQIVASITRDHLEEDGTILHASGGTDCQTQEGYFAVPYFPMQYTYGIVLMLLNESLHEEGSQ
>NZ_CP011388.1|WP_068604152.1|692171_694754_-|DUF4962-domain-containing-protein
MLATAPNTYVLNKDGDLLDVARSVLSRLQNLGMAYMLTQDMKYANRAWSEIQAVANFKDWSHTHFLDAGEITAGFALAYDWMYDAWTEEQKAIIREAMVNKALQYGLPNYRSLTVFANRENNQNSVVNGGLTLGALAIGDEPGYESISGKTIIGAMKSVDEYYLPLYAPAGGYFEGPVYWAYGTEYLTYMLSALDTALGSDFGLSDAPGLAETGYYPAYIEGTNGLFNYGDGGPLKITGAPMIYMAYKYEQPDLLWYYRKTRNDGGGTFGLAWYDPKKYTTPQTDYFPLDRKFAGTEVGTMRSAWYDPKTMFAGFKGGHNGHVHGDLDVGTFVLDALGVRWATDLGPEDYSIGGIGEYYPGGTRWDYYRKREEGHNTIVINPGLEPSQDVRATSTITEFVSKPQGAYSVVDMQSTYHAQADEMKRGYFMTDNRRMFIVQDEMKLKTPSDIWWFMHTEQDIELGPDGTSATLKLNDKRLWVKIISPQPAAFQVMDAKPLPTSPDPNQFPYNLERGKVQKTNEGVQKLAIHLTNTQETTLSVVMVPLSAGEPIPTELPAVKPIADWVIDERELATINGLTINGEALANFQPNTFSYTKQLPYGSTKAPAIQASSAYTVTVEQPAQIPGIAVIKVTDPAGIRKPTRYYIQYTAGLYEAEEAFISQGKIDNIHSGFTGSGFVDYNNMVGSYVEWDVNVLSEGLYKLEVQYANGGAVDRPVEVQVNGVIVESNLSLPTTTLWTNWQRTNVAALLKTGSNRIRLTATTLNGASNLDHLQLRTPSLEEHLSIAEAKGWVTDPVVKNELKVKVQKYREEAQDPAKALTRLKQINNTLKLYAGTKIDRTFAQAMTAYVTLLMKQYSVPL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011388_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_3

1760231-1760341

Orphan

Consensus_repeat	Method
GCTTCGCGCTCGCGCGCCAGCTCGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011388_3

>merge|NZ_CP011388|3|1760231-1760341|CRISPRCasFinder
GCTTCGCGCTCGCGCGCCAGCTCGCTCCGCAGCTGCTCTTGCGCTTCGCGCTCGCGCGCCAGCTCGCTCCGCAGCTGCTCTTGCGCTTCGCGCTCACGCGCCAGCTCGCTC

>NZ_CP011388|3|3|1760231-1760341|CRISPRCasFinder
GCTTCGCGCTCGCGCGCCAGCTCGCTC	CGCAGCTGCTCTTGCGCTTCGCGCTCGCGCGCCAGCTCGCTCCGCAGCTGCTCTTGC
GCTTCGCGCTCACGCGCCAGCTCGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_068605690.1\|1766436_1767918_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|131778
NZ_CP011388.1\|WP_068605692.1\|1768046_1769291_-\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|274452
NZ_CP011388.1\|WP_068605699.1\|1775070_1775991_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381312
NZ_CP011388.1\|WP_068605684.1\|1764378_1765413_-\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NZ_CP011388.1\|WP_082882384.1\|1745202_1746933_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227095
NZ_CP011388.1\|WP_068605688.1\|1766155_1766371_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|182452
NZ_CP011388.1\|WP_068605675.1\|1756404_1757877_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226138
NZ_CP011388.1\|WP_068605695.1\|1770362_1771838_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP011388.1\|WP_068605671.1\|1746988_1749196_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275079
NZ_CP011388.1\|WP_068605697.1\|1772373_1774911_+\|chitinase	unknown	unknown	gnl\|CDD\|119365
NZ_CP011388.1\|WP_068605674.1\|1755412_1756366_-\|primosomal-protein-DnaI	unknown	unknown	gnl\|CDD\|236353
NZ_CP011388.1\|WP_068605677.1\|1758018_1758693_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP011388.1\|WP_068605667.1\|1743970_1745104_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP011388.1\|WP_068605682.1\|1761906_1764348_-\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
NZ_CP011388.1\|WP_082882383.1\|1742834_1743941_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP011388.1\|WP_068605678.1\|1758738_1759278_-\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140
NZ_CP011388.1\|WP_068605664.1\|1738130_1742615_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366032
NZ_CP011388.1\|WP_068605693.1\|1769432_1770296_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP011388.1\|WP_157279814.1\|1749612_1755045_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173807
NZ_CP011388.1\|WP_068605686.1\|1765875_1766106_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_068605690.1\|1766436_1767918_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|131778	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.00365e-50
NZ_CP011388.1\|WP_068605692.1\|1768046_1769291_-\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NZ_CP011388.1\|WP_068605699.1\|1775070_1775991_+\|aldo/keto-reductase	gnl\|CDD\|381312	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR). Bacillus subtilis uncharacterized oxidoreductase YqkF is a founding member of aldo-keto reductase family 11 member C1 (AKR11C1). It may function as oxidoreductase. This family also includes Bacillus halodurans AKR11C1, an NADPH-dependent 4-hydroxy-2,3-trans-nonenal reductase.	1.32953e-114
NZ_CP011388.1\|WP_068605684.1\|1764378_1765413_-\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP011388.1\|WP_082882384.1\|1745202_1746933_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.30305e-55
NZ_CP011388.1\|WP_068605688.1\|1766155_1766371_-\|CsbD-family-protein	gnl\|CDD\|182452	PRK10428, PRK10428, hypothetical protein; Provisional.	1.16377e-16
NZ_CP011388.1\|WP_068605675.1\|1756404_1757877_-\|hypothetical-protein	gnl\|CDD\|226138	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair].	1.66325e-24
NZ_CP011388.1\|WP_068605695.1\|1770362_1771838_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.23965e-105
NZ_CP011388.1\|WP_068605671.1\|1746988_1749196_-\|hypothetical-protein	gnl\|CDD\|275079	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD. Members of this family include NosD, a repetitive periplasmic protein required for the maturation of the copper-containing enzyme nitrous-oxide reductase. NosD appears to be part of a complex with NosF (an ABC transporter family ATP-binding protein) and NosY (a six-helix transmembrane protein in the ABC-2 permease family). However, NosDFY-like complexes appear to occur also in species whose copper requiring enzymes are something other than nitrous-oxide reductase.	1.1997e-12
NZ_CP011388.1\|WP_068605697.1\|1772373_1774911_+\|chitinase	gnl\|CDD\|119365	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.	2.47193e-148
NZ_CP011388.1\|WP_068605674.1\|1755412_1756366_-\|primosomal-protein-DnaI	gnl\|CDD\|236353	PRK08939, PRK08939, primosomal protein DnaI; Reviewed.	6.83924e-76
NZ_CP011388.1\|WP_068605677.1\|1758018_1758693_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.93359e-66
NZ_CP011388.1\|WP_068605667.1\|1743970_1745104_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.50962e-72
NZ_CP011388.1\|WP_068605682.1\|1761906_1764348_-\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
NZ_CP011388.1\|WP_082882383.1\|1742834_1743941_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.23323e-48
NZ_CP011388.1\|WP_068605678.1\|1758738_1759278_-\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	6.5446e-19
NZ_CP011388.1\|WP_068605664.1\|1738130_1742615_-\|hypothetical-protein	gnl\|CDD\|366032	pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10.	1.41312e-93
NZ_CP011388.1\|WP_068605693.1\|1769432_1770296_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	7.00716e-38
NZ_CP011388.1\|WP_157279814.1\|1749612_1755045_+\|S8-family-serine-peptidase	gnl\|CDD\|173807	cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins. Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity.	1.34457e-110

>NZ_CP011388.1|WP_068605678.1|1758738_1759278_-|CvpA-family-protein
MNTLDYILISIGLIGSFIGYRRGLLIQLVSILGFFAAYVAAFVFYDDVSPWLQNVFPVEALPSYQNMEFALKGLKLERYLYNTVAFALLFFTVKIALTFAGRTLNLITKVPGLNAVNQWSGAMLAILEVILLAIIAVNVMKMLPSESVNRLLEQSRTAQWLFDTTPILADKLRQLWITV
>NZ_CP011388.1|WP_068605677.1|1758018_1758693_+|SDR-family-oxidoreductase
MGLLHGKIALVTGAGSGLGRATAIALAREGAQLVLCGRRLDPLKETLKLISEANGDGVAIAADVSSAEDVTHLTAEAVAEFGRIDILINNAAVFEPGGVTDTDLQNWNDQLAVNLTGPFLLMQAILPWMRKQNYGRIVNITSGLAYNGAGGFAAYSASKAGLESLTRTVADEESGNDILANLFNPGTVRSNMHATGQDPSAVAPEIVKLASLAKGGMSGQLVSV
>NZ_CP011388.1|WP_068605675.1|1756404_1757877_-|hypothetical-protein
MRITNLHYFTENHRYYIFRDFSLSPVDAKMLSLVYQPVVGAYAVSLYHLLYQQLAGDKLGFSKAEQLRRLFLLMNVEPNEQGRKLMIEQTSKLEAMGLLITKHRYVVETDEYVYEFELVRPLSPGEYFKVPHLMMLLRDKVGKFAVISLKEEFFAPEPDEFMGRTVNTEDLSLAFYDFEPFRLNASMIDAELEQALSEVSPARETPAPAGLAEQRIEYSDIIFHFPRASSGNTRFVENLKYDHGQMETINYIFNKYRLMKADIRDLLDTDGVFSADGDLMGDLLQKKANEIYRQRKRQGEYTERSLRRMDAASDQVDGDGDEHGVPEEHFVAKEFYLPVPQMLRSQCDNPDQYNMFVRNLPYTNFLEKFFPGAVPKYIEDTFEKLNVNYKMPDEVVNVLIHYISYNKKSWTRSYIDSIAASLLGKQVETFEDAVQHLRKGAEDGQLKGKKRATKAQKPNLKVVQSDPAGDALSDEEMEKMLLLAERLDRK
>NZ_CP011388.1|WP_068605674.1|1755412_1756366_-|primosomal-protein-DnaI
MESLSDLLKDPSNRNLLRQAEMNSLGVMSDPAVIKFRAKHPELDEKTLKLNMNRLYQYAQEYNHCTHCPGLDQCPNDMQGHYTKLSVEGVNGSQYVNDHKVPCKKLTAREAELKIRKRIRCMYIDEKVLEEGFSAKEILTMDAKRAESAHRVLSYVEKTKLKGLQSQGLYLAGNFGTGKTYLMSYLLNELAKEGFTGAIVFMPDFVEDIKRMFQDDKKMFETIELLKETDLLILDDLGSENLNAWFRDHVLASILNYRMGRKPTFYTSNHDFEWLQKHLSYTKDGNEENKGARLMERIKPYVEYIKLEGENKRFRNK
>NZ_CP011388.1|WP_157279814.1|1749612_1755045_+|S8-family-serine-peptidase
MNKYNMRKLLSKGIVTLLALTLALPVNAADPPSGVQVLEPPANQYQAPKSSLPPVPKIDKELKKQFENEVYVRYLIKMKEQADPQSVSLQSQRKAKAIRGTPAATKLSARNAVITSLRETASRTQSPIHNHLTKLKLGHKGVKDFKSYFIVNAMSVTSTKEVMEELAARPDILTIVPDRKLYLDKVIKTEPSSIHLDSIGTSSSEIRWNVERVQAPEVWSKGIDGTGIVVANMDTGVDYTHPALKRKWRGYNAQGEIENPELSWYDPNDQISMPFDANGHGTHTMGTMVGSEEDGDYQIGVAPGAKWIAVRAFTSNYTYDTYMLAGGQWLLAPMDKQGRLHPEMAPDVVNNSWKSGSGKDEWYRPIVEAWRAAGIFPVFSAGNTQYDWDTGEAGSIANPANYPESFATGAVDSNGQLTNFSLRGPSPYGELKPEVSAPGVNIGSSVPKGFYESWSGTSMAAPHTSAIAALLLQANRSLTVDQLEEVIQNGATPRTDTEYPSSPNQGYGYGIVNALQAVNSVIEGAGKVSGTVMVKGSDTQVPVITHTPLVSIFKDVEAVLTANVKDNISVSSVQVFGRVSGTESYISFPMKRTYGDARDGNYTAIVPESMVQLAGLEYYIQITNYGKNVIETPVYRVDVSNGITPGYVQDFETDLNGFTIQTKSGMPWAWGIPTAGPRAAYSGKKVLSTSLNKLYELETEAEIIMPPIDLTKSDEGGFISFKQWYDIETKDAGSVWIASEESNYEYVQQLTLTGTGKAWNTKFLDLKKYAGQRIFLKFTFISDFTHNKSGWFIDDLALRTRDQTVPSAPGGLKGASNLYGNAQLTWGAAENNDVYAYSVYRTTYGGSEPERLATVETKAYTDTSALINNIYIYSVSSVDYSGNESSKSDGVTMTVYGPDVLFEDSFDGPDDNGWTHSGKEDQWQRVSPAYPGPNTAVSAPYAWASNPINSHYSNNADASLISPILDLTGRKEVAMTFDQWYVIESYRDFGIVEITNNGGNTWTQLAKYNNNVNGDRWNSITYNLSKYAGQKVQVRYRLTSDDGGNYAGWYLDNFKVFSSHVVPSQKLPFVETAEISSYRPESAEVSSLEDDTVQADAYTSQQPAESVASSTGDETANDPPQLLPVDAVITVKETGLATGSDPITGTFSFNHSAGVYEVTAESYGYYPQMKQVTIGGNGVTSNLDFQLEAKPYGAISGTVSDKLTGKALAGATVMVREDARVTPVTTDDSGRYTLKALEGNYTLAVFADNYMLKNVPATVLPDKEVAVDISLGSYAGIPGEIKYDEGNPDGGGIRFGIGGNACALRMTPPPTGTLVTGASFVFGVGEMGSEPRQYEFKYALMDASGPNGSPGKMISGPYTGTGLSNGKWTKVDFPEPVSMVNEFYIVYIQVGDSDDAPYLSGSYPKISERRSWVRFNNSWGLISGLFANSEFKIRSNVLNPLDAPVITEPASPRVTNQSSVNVTLTSPVEGVTANVYNGSKLAATGALMNGKLTVPVTLHPGLNQISAELSYGDLISERSASIAISLDNAPPILNLVSPVEGTRTNQNTITVTGTTYDEHPGELKINGEPISATDGGKFSTKVHLNDGENRVTVQASDKAGNVTSLIRAVTLDTTKPDITNIIPAADVHLTRGQTLIVAFDSEPGVAASFSVAIPPGLLIPGMTSTWKLTEKTPGHYEGSFLIPSHLLVEGAPITVSAVDQARNRTETAAQGKLYVKNLAPLAVIQAPAATVSLKNNAFSASGSSDPDGTALKYAWNFGDGSTSSLVNVNKSFKRPGKYTVTLTVTDVDGAQNNATHVIIVKKTHLNRDSN
>NZ_CP011388.1|WP_068605671.1|1746988_1749196_-|hypothetical-protein
MIKQTVSVLLMLALILTGLNLAPNKGYAASSYYVSTTGSNSNPGTLAQPFATINKFMEVAEPGDTVYVRGGTYAMGETYLSKSGSAGNYITIRNYPGELPVLDGGGTAGVAFYYGENEQGAGKGQYVIIDGFVIQNYWRSAINIGWTTPARRPSDNREISPYKTVSNVIIRNNVVDRHGQNGITVMNASDITIERNIVGRTGYNPDTGSWSSGINLWGMYGNNNLVKNNVTYHNIDVSAAHTDGNGIIVDLSFYNGGVRIENNIAFENGGAGIIMTESSYGTIINNTLYDNGKEPNYVNGGTGLGFYGHDAVDNAVVKNNLVYQSFGSGLYHSNPFTNSTFQNNNISGQSGSSNPLFVDGDNANFRLQSSSPSLDTGTSSGAPSDSIGFDSGALLKTTSNQPVSWYRYAPNLSYISGKGEVASLFSPVSRPQGNGFDQGAYEAAGSGTPSGGSNLLANGELDNGTSAWWSWTDSTASGSVSVTGNAGLSGNNALLLDVTNGSDADWKLQAGQNGLTVQAGTTYTLSFKAKSSSNRSIAVQLQQGNSPYTNYLNETVNLTTSAQTFNYTFVPSTSDSATNLKFLFGGNSNDVYVDALSLTAGSGAVNLITNGDFESGNTNGWTSWGGTQQASASSKYEGNYGLYSAGNGIAQTVTGLSPNTTYTLSAHALASSGYINIGAKDYGGTEIVRQITSSTWGAIPVITFTTGSSNTSVLIYVWAPSANSGSIDNVKLIRQ
>NZ_CP011388.1|WP_082882384.1|1745202_1746933_+|helix-turn-helix-domain-containing-protein
MRVSSDVIMLLYSTFRRGTIRKENINVDVRRPVMYNLLIVDDEIIAVKAIAKGLDWSGLPIASIHEAYDYDEAAEVLRTQPIDLLITDIEMPGKDGLELLDYANSVHPHLVSIITTGHANFDYAHRAIQYGSMHYLLKPLDYNELKALITSAVTKISEHRNIEQFYVAYDQYQKQRDQQLPLLRERFWQDLVNQRILLTPDRIEAAATLYEIPVSAQTRVLPVLISVEQWYKELTTRDEEIMEYALRNAASEIILGSYSGQVLQERSGSNLVLFFFESDDDYESPHSQLIYEQCKEYVKQCAAYFHCSLSCYLGVPSPLQDLSLMFRKLVETEKDNVVRTQSVLFHTDTKEESNETAALHLPDFKLWGNLLETGMEAEFKQIMQTWFEQTPEEKLNAKTLKAFYSSFIHMIYQVLAVRGIRHQEIPTLSNDTDAGVTVLRSVHSLHQWSSQLAGEYLAWIRIHAVSSYSVCVAEAIAFIESHLEEELSREQIADEVHLNSAYLSRLFKKETGLSLSDYIMNLRMEKAKLLLREPHIKISQAASAVGYTHFSHFAKMFKRIIGQTPQEYRKGFLNRD
>NZ_CP011388.1|WP_068605667.1|1743970_1745104_-|Gfo/Idh/MocA-family-oxidoreductase
MNIGMIGYKFMGKAHTHAYHDVKLFFPETLAPRRLIICGRDERGVSRAATQLGWEQWSTDWNEVVTHPAIDLVDINTPSNAHKEIALAALKNGKHVICEKPLAITLEDAREMAEAAEQSGAKHMVCFNYRFVPAIRLAKKLLDEGRIGQVRQYRGWFLQDWLTDKDAPYVWRLDRSVAGSGAHGDLNAHAVDLARFLVGEFQEVSGMSRTFVTHRQPSAEEMDEAAFREVTVDDATSFLACFENGAMGTFEASRVAGGRRCANGFEIYGSEGSIRFNFERMNELEVYDTGDDAGSQGFKTILATESCHPYMHAWWPAGHGIGFEHTFIHAVLELLEAIKTDRPCSPNFTDGLRCQQVLDAVEKSIASRQWVRVESNL
>NZ_CP011388.1|WP_082882383.1|1742834_1743941_-|Gfo/Idh/MocA-family-oxidoreductase
MSRVVKLGMIGLGEVAQIIHLPILQGMADRYEITAICDVSAGLLSAIGDRYNVSRRYLNPSELIADEQVEAVFVLNSDEYHTECIVEAARQGKHVFVEKPMSLTIADAQKVIEAKNENGVKVMVGYMRRYAPAFQMAMEEVHRMGRINFVRVRDIIGPNAYFIGQTTPVYRFNDIPEEMGKEKSERGNQLLQEAIGDLAADYGSTYRLLCGLSSHDLSAMRDLIGMPNRVLAASRWNQGMFLSAVLEYDGFHVHFETGLDNQGRFDAGIEVFGDTKTVRVEYDTPYIRHLPVKLILQETEGDMYKETVLRPTYTDPYTVELNHFWEALVRGAEIRTTPEDSLDDLKLFHMLIEAMNHSHLEKTQPVAR
>NZ_CP011388.1|WP_068605664.1|1738130_1742615_-|hypothetical-protein
MIFKNGRKSWLFIVRATLILGLALSGFPVYPTTTLSAASEELIKNGEFDQGDTDWFTWHDSGTTVSTRVSNDAGLSGANSYEVMITDGGDAEWKVQTSQAMPAEAGVTYTLSFRAKASAPRVIKAVVQQSADPYTGYMEQTFQLSTDVQSFTHTYVLGVNDPTSNLVFYMGGDDNSVWLDQVSIQPSSATALLDTGFEDGETGGWTALGDWEGVTVSSVTYQAYSGSRSLEVAGRKANWQGAQYTLLGKTEAGQTYEAEAWVKLADEVTEAQNLKFTLKRALGGSDTYETLNSRQIQPQTWTLLKGSFSIPAGVTYTDFSLKVDSESSPGLFTYYMDDVRIAKKTSLIEEDVPSLKDILAPYFPIGAAVEPSALTAEGDRALLEKHFASMTPENAMKAYVIHTEEDTYEWEGADAIVDYAQSHGMKVRGHALVYGLSTPEWFFKDGARSLNPADPADVQKVDDRMKNHIEDLVKRYEGMNHSIYAWDVVNEALDEKQEDGIRRNLFYDFLGAAYIEKAFKYAYDADLADGTKDIKLFYNDFMETDPARKAVILRMIKDFKQRGIPIDGFGMQAHIGMDTPTADLISKAIDEYAGAGVEVQLTELDLDLYDRYQSAQYTLPREADVAQGYRMKALFEVLKKKAEEGELTGVTLWGVQDGKSWLNMPEYGHGYVNAGHPLLFDRQYHAKYAFWGVANSSMLPVLTQEITAAKGTPVADGIKEAEWKYLRPIPVGGSGTTFQVLWDENHVYVYADVKDESADFTDGVQIFLDPDHSKSAALDSNDRIIKVLRNGNVEGEAEAVVRNKENGYDIELKIPMQQDKPDLKGVTGFDIRITDGDTMVSWNDPLHSQHTGTSNYGAIRYEQIPVTQAVQVHTPPIIDGETDEVWSRAAQIETSLQSRITSGYTDPATGSFKALWDQDYLYVLSEVKDKGLNDGSANAYEQDSIEVFLDENNGKTADYEETGDAQYRVNYNNQYTYNGRNPDHEVVSSVKRTADGYIVEMRIKFQSLQGKVDDMVGYDVQVNDADETAVRQSIRTWSGDNDTGYRSTADYGVLLLKAAPQEPVTPEEPVTPEVPPLPELPVPGNPVPGSPLPQPSPVENLTTITPKRLVDVTITKQQDGVEKTVAIVDRDQFLNELEKETEVLRLQAIEERGTPLLEWVLPSDVFAQATRLGKMLSFEFQGATIRIAPGTVTENIPANQPVILTFLRSQADLKPVQVEGQPQQILAVSDMLNFTLTAGNIPIDRLAKPVNIRLKYEPSVVSHLERLGVYRYNDPVQKWEYAGGTRTEAGYVNFNTMHFSNFTVLEYTKTFSDLVGSYAREAVETLAAKHLVKGVSAEQYNPGAKVTRAEYIALMVRAAEIKSSGVKPLPFVDIPGSAWYKDDIAAAAEAGWTSGKGNQRFNPEAFVTNEEMAVIAHKAYAYMTNDSMTAEQINIISFTDVESVSSWALESVTFALRAGLIRGKPGNLLTPKEHITRAQSAVIVKAVLQAANKL
>NZ_CP011388.1|WP_068605682.1|1761906_1764348_-|phenylalanine--tRNA-ligase-subunit-beta
MKVSYQWLSQYVDVSEFTASELAEKLTRNGIEVDFVEKRNKGVTGVVTGYVKTRDKHPDADKLSVVTVDVGGAEDLQIVCGAKNIDAGQKVPVAVVGAVLPDDFKIKKAKLRGVESQGMICSAKELGLNDKLLPKEIQEGILVLPENTPVGEDILKVLGINDEVMELDLTPNRSDALSMIGTAYEIAAIIGREIKLPQEEQGMLHSGVKAEERISVEITATEQCTHYAARLIENIQVGPSPLWMQNRLMAAGVRPINNVVDVTNYVMLEYGQPLHAFDADTLNNGHIDVRLANAGEKLTTLDGTERTLEPHMLLITDGVKPVALAGVMGGLETEVTAGTTRILLESAKFAGNSVRKTSRQLGLRSEASLRFEKEVNPEAVIPALNRAASLLAAHASGVVAEGIVEKKTAESQPVTLTIGLDRLNAYLGTELSSLEVKAILTRLHFTYEENNHEYTVHVPSRRGDITREVDLIEEFARLHGYTNIPTTLMNGVTTPGSLTHAQKVRRALREGLTGSGLHEVMTYSFGHPSAGERFPGLYGASRNITLAMPMNEERSTLRTSLMPHLLDVATYNRNRKTDDVAIFEIGNVYVTEEERLTRHPQEKPMLAMLWTGKRRASQWNSKAEAVDFYDLKGVFEKACESLGVEGLTFAAAQPAGFHPGRTAEIHVEGVNGDTLLGYIGQLHPELQKEQDLADTYVLEIGLESLYEASKGKIEYKGLPRYPSMGRDIAVVVNTEVQVGNLLTKVRDTAGELLESVQVFDIFTGERLGEGKKSVALALVYRHAERTLTDDEVSELHAKVVASLEQEFGAELRK
>NZ_CP011388.1|WP_068605684.1|1764378_1765413_-|phenylalanine--tRNA-ligase-subunit-alpha
MKERLEGLKLEALQELKQVASQGELNDLRIKYLGKKGALTEILRGMGGLSAEERPIIGQVANDVRAAIEEVIAEKQDAYERAETEGRLRAETIDVTLPGRPFQQGSIHPLNKVIQDIEDIFIGMGYTVAEGPEVESDYYNFEALNLPKDHPARDMQDSFYITEEFLMRTQTSPVQIRTMEARKGEAPVKIICPGRVYRRDDDDATHSFQFHQIEGLVVDRNIRMSDLNGTLKQFVQEMFGKQTQIRLRPSFFPFTEPSAEVDVTCVQCGGNGCRVCKQTGWLEILGAGMVHPNVLIAGGFDPEEYSGFAFGMGVERIAMLKYGVDDIRHFYTNDLRFLKQFSSK
>NZ_CP011388.1|WP_068605686.1|1765875_1766106_+|hypothetical-protein
MKGKTVYSVVAGLQGAAILTFMILLVKKYAFDDSSLITKQPMELLFYLFSAGVLVTLGLFMLDLVRKHFQYYREWE
>NZ_CP011388.1|WP_068605688.1|1766155_1766371_-|CsbD-family-protein
MDNNVFKGKWNQLKGEAKKQWGKLTDDDMDVIGGEKDKLVGKLQERYGHSKDAAEREYDNWSQNYRDPVNK
>NZ_CP011388.1|WP_068605690.1|1766436_1767918_-|FAD-dependent-oxidoreductase
MSKQVIVVGSGLAGLTCAMDLLDEGFEVTVLEAGAIPGGRTSNWDENGMEVESGFHKYIGFYSELPKLLERAGINLGEMLTWETTLEIRLPDQEEEEGAVFGLAPGRSPFKAIAGVLGNNDFLSPSDKMSLIPFMSAGLKDYTDNPEELDRYTVAEYAQKHGVNPEAIRHILEPLTAGVLFLPPERYSALVFFGIFAPGVPGFYKMKIGAFNGGMYDVMIHPIIHAITARGGKLRTLSRVSELISDGNQVIGVRIGEEELLADHVVVATNMHGAKLLLAQQFSGHNWFEDFLEMPMMSDITVQVETSKRLMELDRTTFAPGTCIGSFTEQSQTTFKHVPGRLSFILTPPERFIDLSDEEVFSIFLQDAKRIGLNIEDVLLDYRVIRMKDHFHTVEPGHAWRRPAQKTPIPGLTLAGDYTYQAMFTTMEGAVISGHWAAEAITGKGKERKPRAENPNPDALTDHVVRAPDMLGRAAAESAPLDTPERFIGRKDG
>NZ_CP011388.1|WP_068605692.1|1768046_1769291_-|beta-ketoacyl-ACP-synthase-II
MERVVITGMGIISPLGNNVHTFWNGLVEGKSGISPIESFDTTSYKTKIAGSVRDFDGDERFGRKEARRMDRFVQFAVAAADQALSDSGLVMDYMNRERVGVYIGSGIGGIQTLMEQGKLLSERGPSRVSPTLVPMMISNMAAAMVSMRFGCWGPTLSPITACSIGNTAIGEAFRLIRYGGADVIFAGGTEAAVTEMSLASFSNATALSERNEAYGGASRPFDARRDGFVMAEGAGVLVVESLSHALKRDANILAEVVGYGASSDAYHMVATHPEGRGAYLAMKAALADAQLQPHEIDVINAHATSTEAGDLSETRAIKQLFGAQAYHIPVTANKSMTGHMLGAAGGAEAISLIQSIRNGIIPPTLNQEHSDPDCDLDNVPNVAREVELQCGMSNSFGFGGHNAVIILRKYSSQT
>NZ_CP011388.1|WP_068605693.1|1769432_1770296_+|helix-turn-helix-domain-containing-protein
MNHDVRLKALSAFLKKQRSKISPESVGLPAGSRRRTPGLRREEVSQLAGVSTTWYTWLEQGRNIQVSHSVLDHIASALRLTSDERKYLFSLALEYHSEIHILDETPLQIHPSLQKILRELRNCPTIISDRHCHIVGWNDAARYVFMDFEQIPAEQRNMISLLFERKEFRRLAVNWEDFVSGFLAIFRAYYGQYVDDEWYNLFLDDMMERYADFHTLWKQSSVSSAPDVLIEFRHSRAGKMLFDLTSLQVQGNADLRCSIYTPATDTATERKLIRLMEPKAEHNVDKR
>NZ_CP011388.1|WP_068605695.1|1770362_1771838_-|multidrug-efflux-MFS-transporter
MNTTQAVNAGSSEFSIRKIIGPMMAIILGMIMVILDSTVVNVALPGLVKDFKSDVATLSWTITGYTLALSAVIPLAGWMTDRFGGKRVFMITVAFFTLGSVLCSIAQTPEQLIIYRIIQGLGGGMVAPIGMAMVFRLAPPEKMGSVMGLLGVPMLLAPALGPVLAGYFIEYVSWHWIFLINLPIGIIALLVAMKFLPKTEKKAVPSLDIKGMILAPIAFATLAYAVSEGGTSWTSTNTITALIVGGIALIAFIFVELRQKQPLLELRVFASKDFSRGIVIAWLSQIALFGSFMLVPLYLQGVKNYNAFDTGLILLPQALASGIFMPLGGRLFDKIGARPLAITGLTAVTLALIMLSQITIDTSLPYIMGALILMGGGMGCSMMPLNTHILQAAPRSLVHRVTPLTTAAQQVMVSFAVAGLSGFLVSRISTYMTEKGNPLDASISAYGDTFIFAACVAASGAVLALLLRKPKPQASETKTDDKGNAAMMMNH
>NZ_CP011388.1|WP_068605697.1|1772373_1774911_+|chitinase
MSIQAKSKSYRVTLIYTLLAALILSLLPYIGLSTPKAEAASDYKIVGYYPSWGAYGRNYQVYDIDASKVTHINYAFADICWNGIHGNPDPTGPNPQTWSCQDEVGTINVPNGTIVMGDPWIDAGKSNPGDIWSDPLKGNFKQLIKLKQANPNLKTIISVGGWTWSNKFSDVAASAVTREVFANSAVDFLRKYQFDGVDLDWEYPVGGGLPGNSVRPADKQNYTLLLQKIREKLNAAEATDGKDYLLTIASGAGPTFVANTELDKIAAVTDWINIMTYDMNGGWQTTSGHNAPLYLDQAAVNAGLPQAAAFNVDAAVQAHLAAGVPSNKLIMGTPFYGRGWSGCSSAGNGQYQSCAGGANVGTWEKGSFDFYDLEANYINKNGYTRHWNNTAKVPYLFNPSNGNFISYDDVESFGHKTAYIKSKGLAGAMFWEFSGDRNKTLLNKLSSDLTGPVQPGDTAAPTVPGALTSTGKTSNTVSLSWNASTDNVGVTGYVVSYGGTNVNVTGTSTTISGLTGSTAYTFTVKAKDAAGNLSGASNAVNVTTNAPAPDAVAPSAPAGLTSTAKTSTSVNLSWTASTDNVGVTGYTVSYGTASVNVTGTTASITGLTAGTAYSFTVKAKDAAGNISAASAPLSVTTDSANTCTVAAWVSTTAYTGTQRVSYNGVLYEAKWWTQGDRPDLSGADGPWKSVGTCGGTGGGGGDTVAPYAPAGLTATGKSSTSVNLSWSASTDNVGVTGYTVTYGSTNVNVTGNSASITGLTANTAYSFTVKAKDAAGNSSASSTALSVTTDASTGGGTGGTAWATGVSYKVSDEVSYSGKVYVCLQAHTSIQGWEPANVAALWRVK
>NZ_CP011388.1|WP_068605699.1|1775070_1775991_+|aldo/keto-reductase
MKYRRLGNTGLKVSVVGVGTWQFGGEWGRSYTAEEAGAVLRRAKERGINLIDTAECYGDHLSESLIGQFLKNDRREDWVLATKFGHQFHGHLDRTDKMGTEDMLLQLDRSLQALQTDYIDLYQFHSGPDSAFDNDSLWTALDKQVQAGKIRHLGISIGSNDNLHQTEKATEVGASAIQVVYNRLDRKPEERVFPTCEAQDLGVLARVPLASGFLSGKYKPGASFGEGDVRKRVGADDLRDKLTLVEVIARTEVPEGTNMAQWALAWCLRHPAVTTVIPGCKDEAQVDANASAAELVSDDHPQSWKS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011388_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_4

1962047-1962157

Orphan

Consensus_repeat	Method
AGGGATAACCCGGCATGGAGCATTTTGCAGATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011388_4

>merge|NZ_CP011388|4|1962047-1962157|CRISPRCasFinder
AGGGATAACCCGGCATGGAGCATTTTGCAGATAATAGCACGTTCCCTGATCTGCACCAAGCACCCTCACTGATTCTAAGGGATAACCCGGCATGGAGCATTTTGCGGATAA

>NZ_CP011388|4|4|1962047-1962157|CRISPRCasFinder
AGGGATAACCCGGCATGGAGCATTTTGCAGATAA	TAGCACGTTCCCTGATCTGCACCAAGCACCCTCACTGATTCTA
AGGGATAACCCGGCATGGAGCATTTTGCGGATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_082882403.1\|1956945_1959753_+\|chitosanase	unknown	unknown	gnl\|CDD\|366548
NZ_CP011388.1\|WP_068605872.1\|1967386_1968496_-\|Ger(x)C-family-spore-germination-protein	unknown	unknown	gnl\|CDD\|274338
NZ_CP011388.1\|WP_082882404.1\|1969589_1971029_-\|spore-germination-protein	unknown	unknown	gnl\|CDD\|377020
NZ_CP011388.1\|WP_068605873.1\|1968485_1969583_-\|GerAB/ArcD/ProY-family-transporter	unknown	unknown	gnl\|CDD\|281794
NZ_CP011388.1\|WP_068605862.1\|1951524_1952895_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP011388.1\|WP_068605876.1\|1972677_1973778_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP011388.1\|WP_068605869.1\|1963038_1963242_-\|sulfur-carrier-protein-ThiS	unknown	unknown	gnl\|CDD\|169065
NZ_CP011388.1\|WP_068605868.1\|1960782_1961727_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
NZ_CP011388.1\|WP_068605871.1\|1965287_1967060_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP011388.1\|WP_068605870.1\|1963297_1964458_-\|glycine-oxidase-ThiO	unknown	unknown	gnl\|CDD\|274092
NZ_CP011388.1\|WP_082882739.1\|1962175_1963030_-\|thiazole-synthase	unknown	unknown	gnl\|CDD\|234687
NZ_CP011388.1\|WP_157279932.1\|1954009_1955779_-\|DUF4080-domain-containing-protein	unknown	unknown	gnl\|CDD\|379119
NZ_CP011388.1\|WP_068605867.1\|1960114_1960786_-\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|234590
NZ_CP011388.1\|WP_068605866.1\|1959800_1960010_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375821
NZ_CP011388.1\|WP_082882405.1\|1971204_1972521_+\|DUF4038-domain-containing-protein	unknown	unknown	gnl\|CDD\|379072
NZ_CP011388.1\|WP_068605863.1\|1953007_1953979_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP011388.1\|WP_082882402.1\|1955907_1956807_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|182362
NZ_CP011388.1\|WP_157279823.1\|1948280_1949357_-\|ion-transporter	unknown	unknown	gnl\|CDD\|369572
NZ_CP011388.1\|WP_068605861.1\|1949392_1951117_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP011388.1\|WP_082882740.1\|1964454_1965192_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181086

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_082882403.1\|1956945_1959753_+\|chitosanase	gnl\|CDD\|366548	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8.	1.28225e-16
NZ_CP011388.1\|WP_068605872.1\|1967386_1968496_-\|Ger(x)C-family-spore-germination-protein	gnl\|CDD\|274338	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family. Members of this protein family are restricted to endospore-forming members of the Firmicutes lineage of bacteria, including the genera Bacillus, Clostridium, Thermoanaerobacter, Carboxydothermus, etc. Members are nearly all predicted lipoproteins and belong to probable transport operons, some of which have been characterized as crucial to germination in response to alanine. Members typically have been gene symbols gerKC, gerAC, gerYC, etc. [Transport and binding proteins, Amino acids, peptides and amines, Cellular processes, Sporulation and germination].	9.44776e-61
NZ_CP011388.1\|WP_082882404.1\|1969589_1971029_-\|spore-germination-protein	gnl\|CDD\|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	4.18037e-168
NZ_CP011388.1\|WP_068605873.1\|1968485_1969583_-\|GerAB/ArcD/ProY-family-transporter	gnl\|CDD\|281794	pfam03845, Spore_permease, Spore germination protein.	2.08627e-35
NZ_CP011388.1\|WP_068605862.1\|1951524_1952895_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.43896e-133
NZ_CP011388.1\|WP_068605876.1\|1972677_1973778_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	4.62872e-33
NZ_CP011388.1\|WP_068605869.1\|1963038_1963242_-\|sulfur-carrier-protein-ThiS	gnl\|CDD\|169065	PRK07696, PRK07696, thiamine biosynthesis protein ThiS.	1.12099e-14
NZ_CP011388.1\|WP_068605868.1\|1960782_1961727_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	4.99531e-132
NZ_CP011388.1\|WP_068605871.1\|1965287_1967060_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP011388.1\|WP_068605870.1\|1963297_1964458_-\|glycine-oxidase-ThiO	gnl\|CDD\|274092	TIGR02352, Glycine_oxidase, glycine oxidase ThiO. This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	1.0925e-97
NZ_CP011388.1\|WP_082882739.1\|1962175_1963030_-\|thiazole-synthase	gnl\|CDD\|234687	PRK00208, thiG, thiazole synthase; Reviewed.	4.56989e-150
NZ_CP011388.1\|WP_157279932.1\|1954009_1955779_-\|DUF4080-domain-containing-protein	gnl\|CDD\|379119	pfam13311, DUF4080, Protein of unknown function (DUF4080). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	3.20638e-51
NZ_CP011388.1\|WP_068605867.1\|1960114_1960786_-\|thiamine-phosphate-synthase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	1.48452e-80
NZ_CP011388.1\|WP_068605866.1\|1959800_1960010_-\|hypothetical-protein	gnl\|CDD\|375821	pfam18395, Cas3_C, Cas3 C-terminal domain. This is the C-temrinal domain of Cas3 proteins. The C-terminal domain (CTD) is shown to completely wrap ssDNA inside the helicase. Deletion of the CTD (aa 819-924) reduced CRISPR interference. It is suggested that the CTD regulates the N-terminal HD nuclease activity by functioning as a substrate filter.	0.00739526
NZ_CP011388.1\|WP_082882405.1\|1971204_1972521_+\|DUF4038-domain-containing-protein	gnl\|CDD\|379072	pfam13204, DUF4038, Protein of unknown function (DUF4038). A family of putative cellulases.	7.56375e-145
NZ_CP011388.1\|WP_068605863.1\|1953007_1953979_+\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	6.51564e-17
NZ_CP011388.1\|WP_082882402.1\|1955907_1956807_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|182362	PRK10296, PRK10296, DNA-binding transcriptional regulator ChbR; Provisional.	4.07439e-26
NZ_CP011388.1\|WP_157279823.1\|1948280_1949357_-\|ion-transporter	gnl\|CDD\|369572	pfam07885, Ion_trans_2, Ion channel. This family includes the two membrane helix type ion channels found in bacteria.	6.47494e-15
NZ_CP011388.1\|WP_068605861.1\|1949392_1951117_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	1.02199e-08
NZ_CP011388.1\|WP_082882740.1\|1964454_1965192_-\|hypothetical-protein	gnl\|CDD\|181086	PRK07695, PRK07695, thiazole tautomerase TenI.	1.26896e-70

>NZ_CP011388.1|WP_068605868.1|1960782_1961727_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MKLAKVLTIAGSDSGGGAGIQADLKTFQELNVFGMSAITAVTAQNTVGVHGVFPVSTEALEAQMDAIGTDLAPQAVKTGMLYDAERIQLTVAKIRQYRWNLVVVDPVMIAKGGQTLLELAAIRAVVEELLPISTLVTPNLPEAEFLTGMKIRNRKDWREAAIRLHEMGARYVLIKGGHADEDVEGTSATEAVKSTESTDAQEFVNKRFSADTEDDGERMYTNQVVDLLYDGVCFVEYSGPRIHTKHTHGTGCTLSAAITAELAKGAGVREAVGTAKAFIQAALEHAPQLGAGHGPTLHAAYRLHGPAPAAGAAR
>NZ_CP011388.1|WP_068605867.1|1960114_1960786_-|thiamine-phosphate-synthase
MSRALPPAAVRRMLPLYFVAGTGNTGGELALLRTLAAALEGGISAFQLREKGPGALLGRARFALALGLREQCRRRGVPFIVNDDVELALAVEADGVHVGQEDAPAAEVRRRLGARLLGVSVHTVDEARRAAAAGADYIGCGPMYATASKPDARAVAGPALVRQLRAAGITLPLVGIGGITSENAASVTAAGADGVAVISAISGASDPRAAAVLLKQAAMSINS
>NZ_CP011388.1|WP_068605866.1|1959800_1960010_-|hypothetical-protein
MILYQVTCWMNEYHYLKQSIRLSQGDMAFLEYKRDQVLARLMNQTLLWSTPPQSRSALALPLNYDQQAQ
>NZ_CP011388.1|WP_082882403.1|1956945_1959753_+|chitosanase
MLLFRKTKFKKVSKVVGCTLAAVLAFSSGPSTLMKFPVASASANSAAMPVSVSNSFAAEQYPFPHNVSYPHGIMPSLDRETLNRDMLSMYTKWRDLYITTEGAKPGEVRIRASDATYKNGTCSEGMGFAMLITVYMANASNSGHSDYDGLLRYYKRSLSPGYNFMGWKVDKDGNSIDPYSAPDGDLDVAISLLMAHKQWGSGGEINYLEEANKIIADIMEHLIYKPSYIVKQSQASITSVISSYEIPGWFDLFGEITGDTRWDKVTGAAYDIFDHFYNLNPQTGLVPYRWVLSPTGVPTYTGPNGPDNNSTSYGFDPSRLPWRVGQDFLWNGTSNNDLAHDLPDRNVKWFMTKINGNPATAALSYNIDGSVRNAGPSPRNMVGPMAVAAMVDSSNQASLDLMYNYLRTLEPISDWPGGYYQDAVMMMSMLVLTGNMPNLYDYAPYPNNTLPAPLPVTDTVPPTKPIGVTVTKSTYNTLDLSWSAATDDQGPVIYEITRNGKLYNVTPTLATKMEYLDPGTEYTFSVIARDKAGNKTASDEVKGTTVTDTAAPPKTTGITAQAKSLTSITLRWNRPADNDTINELSYDVLMNGTKINDNPVYFTNDYVIKNLQPATSYRFQIVAKDLTGNSSVSDVFSTSTTATDTAKPTRPSYVKATEQTNDSITLAWNASLDDNPAGTVTYDVYNSGQKVNTTPIVGTSFPITNLQPSTEYAFKVTARDAAGNSQDSYIYDTKTTEVKINERLYGPSSANFGQRLTLQYGVNSTVQSTVYTLDTVISYDPAVLQFSQASSIHPDYIIKETDTSLPGKVRIKATGVNGAIPASGDLANITWLPRRVNQSVTLSTLSHALNQRNEQIPTEGASLTIQVTFIPEDVSSKGGGNPDGVVNLYDLQFVTRHMNKSSKSSDWAAVRIADLNLNGRIDVADLAAVKSKIGH
>NZ_CP011388.1|WP_082882402.1|1955907_1956807_-|helix-turn-helix-domain-containing-protein
MMHFLSEGVYGLLKFLESELINPDVGFHFSDYCSIKNTRGLHEHDFYEFFITYGGSVLHQVNGVKELLQEGTLVFIRPRDRHSYEELHHTDCYIMNVAFPARLMEDLFRFLGPSPFLERLINSAAPPQIVLPVSESLILKKRFHRLAWSAAYRTGSSDVPSLFKALITEVLFRQFSKQQKPELVLPDIPVWLTELQMTMKRKENFIEGLPALHSYCDKSPEYISRSIKRHLGVTPTEWINGFRLQYASKLLRSTDAEVIEVAMDSGFDNLSYFYRLFKSKFGQTPVQYRKSFKNLILPE
>NZ_CP011388.1|WP_157279932.1|1954009_1955779_-|DUF4080-domain-containing-protein
MKTVVATLNAKYIHTSLALRFLKAFSAKDFHIDIAEYTIKDPVMNIVSDLFTRNPDVIGFSCYIWNIEETIKVMEMIRKIKPEVTIILGGPEVSYDTEYWMNRIPQADFIVMGEGEETLHHLLTELSTTRKYHFVYGLAYRKGEEIILTPGRPKLNLAELPSPHRFEEDLPTLSNRVVYFETSRGCPFSCQFCLSSIEVGVRYFDMERTKSDILYLIDKGAKLIKFVDRTFNIKRDYALEIFQFLIENHQGCVFQFEITADIMRPEVLDYLSEHAPPGVFRFEIGVQSTNDPTNAIIQRKQNFTKLARTVNKIKESGKIDQHLDLIAGLPLEDYDTFRTTFNDVFALRPEELQLGFLKMLRGTGMRNDAPKYNYIYMDHAPYEILGNDLLPFADIVRIKRVEDVLEKYWNAHRMDHTLEYLIEREFASPFDFFQAFGNYWEDRGWQKIGHQLEDLFTRLLGFLQDRGTENMDVILGLMKLDYFMNHKYKPRKIWWDFTMEKSDWAGYMKEIAAHPERVSEGFAALGADEKLLQKHAVIEVIPFDLQQFRADGTVDRTRTTLLVVYYQGEAAVPALAFTMLMETAEQSVT
>NZ_CP011388.1|WP_068605863.1|1953007_1953979_+|DMT-family-transporter
MGFSRNAAYIELTVAAMLVGSSVVVGKLTTMQMPVFLSQSASLAVALVLLIPLALNRRGASLRVRRKDLYSLLLQALLGMFLFRIFMLYGLKFVSAAEAGIVTSMTPAVVVCLSIFMLKEKLTRRLLLGVFCSLAGIISIQATGWFTSVPSVASESSSPSTAPWIGLLLILAAVTGEAMLTILRKMTASHVSSLLGTTYVTFFSFLMFLPFSLVEATQYDWAAAGYRELGLVVYYGIFVTALAYLLWFRGVSKVSAGTAAVFTSCIPLSAMLLSYAVLREPFAWTHLVGGAFVIVGVWQVSSAPERIGLRHKHGDLSPVEYRN
>NZ_CP011388.1|WP_068605862.1|1951524_1952895_-|PLP-dependent-aminotransferase-family-protein
MWFSIDSEGDIPMFRQVFEAFRESILTGKMPAGYKLPSTRELAAELHISRNVILEAYELLLAEGYITGRSGAGTYVAEGTQLRSYSPMEPVLSFASKPESEESERDLISFRTGLPAVDLFPMKKWGTILQSVCMDATAANLGYGDSCGVPELRLVLAEHLWKTRGVICRPEQIVITSGAVQALQLIVRLLLSSRDHVLVEDPSNEDLKSILTSTGAALQGIPVDDFGIMTHLFPADVSPQCIYVTPSHQFPMGGILPIQRRIELIEYVRQTVGYIIEDDYDSEFRYDGAPVQSLQSLCPDQVLYIGTFSKTMFPSLRIGYMIVPEPLVDGFRQLKRLSDYQTPSLEQLALVHFINQGHLSRHIQKMKKLYRRRRNILLSALTDQFGGDFRICGRAAGLHLVADFEAPFPDGLQERFREEGVYGALISGNGLLLGYGHLNEEQILEGVLRIGKAMRM
>NZ_CP011388.1|WP_068605861.1|1949392_1951117_-|PQQ-binding-like-beta-propeller-repeat-protein
MKLKCALMVLLGLACGCAGTTQFTESENPSIEQTKATNRTPLSPKPNSSPSETKLTPSTSSNTKSTAPNTKPPLPPNPDDKSSGGTKGKAWLPLQAVATTNQPITFQHQGTPSPQTFPEQYTEIEGVLTFRGNHLRDAPSYGKRNLTERKLVPAWSFTTSSSSWGGGAGWTGQPILVRWKEETKKIMNLNAAYRTQPNFVEAIYASLDGNVYFLDTATGKLTREPIRTGNPIKGSASLDSRGYPLLYVGEGIPEKGGIGFGIYSLIDGKRLYYQKGIEPYAYRRWGAFDSSALFNRNADTLTVGGENGLLYTLKLNTKFDRSGPSISVQPKPLKYRYVIAGKQGNTYHGIENSVAVYKNFAYFSDNMGALQCVNLLTMQPVWATPHTDDTDATLVVEVENDHPFLYTGTEVDKQGSKGNAILRKIDGLTGVTLWQKNIPALTVKGEHPVNGGLLATPVKGKGKISHLMIFTVARYGNLSGGLMIALEKKTGKEAWRWTMSNYAWSSPVDFEDIAGNPYIVQGDSVGNLHLLDARNGKVLHEISLGANIEASPAIFDDTIVVATRGGKIHGIVMR
>NZ_CP011388.1|WP_157279823.1|1948280_1949357_-|ion-transporter
MKHLLINDVCMGEVFAVFTIRRLATLIRKFNNISLLLAASAFVIICAILMRTLEPERFTTFFNAIWYVMTTVTTVGYGDLFPETAAGKVVAMFMFVFGIGLVGVVIGKVVDGLGSFTRRKEEGRLIYKGRKHIIMIGWSKKTEIAVNEVLESDTFTDIIVIAQTDRLPLNHERLHYIQGDPTDRETLLKANTLNAKAAIIFADELIHDASLTDGKSLLIASTIESLAPDVHTTVEIMQEKHIQNFNHIHVNDFILAQETISRLAVRSALSKGITTLYNRLIRRGEEEGGELFEIKPRKEWKTYRDAFNALLAEGATLIADQHRLGVNHLMDTTIPEETRLYVICEESVYVKLKHSEER
>NZ_CP011388.1|WP_082882739.1|1962175_1963030_-|thiazole-synthase
MKTYLGKDKAQESAQESAQESAQESAQENAQVNESLKIGPHRFQSRLLLGTGKFTSADVQKAAVEVSGAEILTFAVRRMNIFDQEQPDLLQKLDIAQYTLLPNTAGAKTAVEAVRIAKLAKASGLCDMVKVEVIGDDRTLYPDPLETLKASEMLLELGFIVLTYTSDDVVLARRLQELGVHAVMPAASPIGSGQGIVNPLNLSFIIEQATVPVIVDAGIGAPSDAAKAMELGADGVLLNTAVSGSGNPVAMAEAMRLAVEAGRLSHGAGRIPVKRYATASSPVY
>NZ_CP011388.1|WP_068605869.1|1963038_1963242_-|sulfur-carrier-protein-ThiS
MTLWINGMRTDLPLICETVGELLGQLNLRGKVVIVELNETILDAGIRDQALLRDGDRVEMIHFVGGG
>NZ_CP011388.1|WP_068605870.1|1963297_1964458_-|glycine-oxidase-ThiO
MSETNVKHADVIVVGGGIIGCSAAFQMAKRGMKVIVLDSGGMGGEASGAAAGMLAAQAEMQQGGPLYAWALESRGMFPALAQELKNLSGVDIELMREGLLIPVLTEEGKDELQTAAQWQRLSGEEAEWLDSEALQAREPELSAWMLGALSIPGDGQVSAPQLVKGYKLAAEAYGAAFREYENIHEIWTERGKVRGVRTARKTYFAHQVVVTAGCWTGNVLKETGLVLPMIPVKGECISVIADKPLLRSTLFSHCCYLVPKRGNRILIGATSTEGTYDKRLTTQGVLTLLERASAILPGIVHTEFERGWTGLRPQTPDGLPYIGLHPDVQGLIIAAGHYRNGVLLSPITGQWIADLVEGKGAWELGIEALSISRIGLAAQALEQSGN
>NZ_CP011388.1|WP_082882740.1|1964454_1965192_-|hypothetical-protein
MANTGGTSPFKGEAQGDPRGQQAQRPEQDGLAVHELHVITDGKQPWDRLIRIAAEIAPVVSAIHLREPQAGAAMLCELIGALTAAGVSLERLIVNDRADVAWAMRTGGVQLGGRSLSAAQVRDRFPGLVYGRSVHRPEEAGDAAAQGARYVLFGHVFATPSKPGRPGRGVRELAAAVRCAATAAGVIAIGGIGTSQVAEVCAAGAAGIAVMSGIWEAADPVEAARCYRAALDAYSVYAVRGEKQA
>NZ_CP011388.1|WP_068605871.1|1965287_1967060_-|phosphomethylpyrimidine-synthase-ThiC
MSKMAEETGAPYIKAFPASRKIYVEGTADDVRVPMREIALSDTETSEGVEHNAPVRVYDTSGLYTDGEHQTDIRQGLPALRQPWITRRGDVETYEGRTVKPEDNGMPAAGWRSQEAEERFPRVHSNPLRAKAGQNVTQMHYARRGIITPEMEFAAIREGMDPEFVRNEIACGRAILPNNINHPESEPMLIGRHFLVKINANIGNSAVSSSIEEEVEKMTWAIRWGADTIMDLSTGQHIHTTREWIIRNSPVPVGTVPLYQALEKVGGKAEALTWDIYRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMASWCLAHHKENFLYTHFEEICEIMKAYDIAFSLGDGLRPGSIADANDEAQFAELQTLGELTEIAWRHDVQVMIEGPGHVPLHKIKENVELQMEICKEAPFYTLGPLTTDIAPGYDHITSAIGAALIGSFGTSMLCYVTPKEHLGLPNKNDVREGVIAYKIAAHAADLAKGHPGAQERDDALSKARFEFRWRDQFALSLDPERAMEFHDETLPAEGAKSAHFCSMCGPKFCSMRITQDIREYAKRHGMETEEALERGLEEKAREYSESRR
>NZ_CP011388.1|WP_068605872.1|1967386_1968496_-|Ger(x)C-family-spore-germination-protein
MTSRALISLSTCMILLILTGCAPEMERQAIEDLDMAGVIGFDQAAGHKYNVTVSVPQPTNEQSDEDKVLSSVVQLPHEMLYRLSARSGKTLSARQVRVILFSEEMARNEGLLTTLLNLYRDPLISNNAYIAVVKGTVHEFMSGGMASKQKSMYLNDLLHPRESTSFSPFTTLRDFIFRVTNEVSDPMVPYLEKHEEIVEISKIGLFREDRLVAFNTLEETRMVEMMRSDKHIPNITVDLDLEGSSQQYLLLDFVRSRMKTTVKGSLDKATIHMKLMEQGAVQDFQDGLDLEDPADINKLERESEKHIKQDVHRLIQKYNRLSIDPAGIGRYIRAEFRGDWTREKWRKSMQDAEYNIDVRVRIRNTGTMR
>NZ_CP011388.1|WP_068605873.1|1968485_1969583_-|GerAB/ArcD/ProY-family-transporter
MTQSARVRHLKPVHVIFLGQNVMVGYSVIVLPHLLSPAGHTQWWLVIMMAIIAQLTLIPMTILAGKYPELNLFEINRKLLGLWIGSVCNYAIVIYGVFQTAVVVSGYVMLVGTVSLPDMNTYLPLIALLLVVAYIVFGGIRHIARMCILSFILTGWIIYCLKWSMQKGEFTNLLPLFPLAPWEHTWTAFLSGFPSMFGFELVLFYFPYIINRKQALKHASIGLWITVLLYLSVSFAGVIYFSRWQLENVQYPLLDILKSVEFTFVERIENLGLALWLFTVVTTAAAYLWVSAKGLDGLWRKKRSLHIYLCVAAVFVIIRVPSATIIKYAYYYQYANVAGYILILWSLLLLGLHFISQRKAARHDK
>NZ_CP011388.1|WP_082882404.1|1969589_1971029_-|spore-germination-protein
MKVGLKSVFTKESIQSQLKDIEDAKFEDITVFKRKAVLIYIKSLQDYANLQLLVIKPLQDSTDTRSVEDALPFSQIVNDNDLSSLIRDILNGYTVLLMEQSDEIYKINTMKTSQRSIAPSENEGTVLGPQDAFTESLETNLSQIKKRIVNPYLKSPGLRIGTESGTEVAVMYLEHIANPSLVSKVLSRLKHVEHPGLLSASQLNSLLEDHPFSPFPQLGLTQRPDNVTQALLNGKVCILMNGSPEVIICPITFYELFISPEDWYIRWTGGTAIRLLRVFGFFISIMLTSMYVSINTFHQEMLPPELLQLLLESRSKVPFSPLIEVLCIELVIEILREAGARMPAKIGQTIGVVGGIVIGTAAVEAGLASNVLIVLVSISALLSFLPANYLLSTAGRLVRYAFIFGAGMFGLFGQMMVLAFLLSHLLKLTSMGHVYISTPMTSEQTDWRTSIYRAPILQWLKQSAAAKAGNRVKRPMDEE
>NZ_CP011388.1|WP_082882405.1|1971204_1972521_+|DUF4038-domain-containing-protein
MLAEGIYMKALKVSENGRFLVTEDEQPFFWLGDTAWELFHKLNREEAVDYLNQRAALGFTVVQAVALAELEGLTVPNRYGRLPLAVGKDGSIDPESIDDSRYPDSDYTYWDHVDYILETAASLGIYVALLPTWGDKYNLKWGKGPVIFNPDNAREYGRWIGKRYGHLKHIIWVLGGDRPLETEEHYAVNRSMAAGIKESSSNLITFHPCGGASSSQWVHHEDWLDFNMIQSGHNLAHLHNDDWVTKDYHLTPVKPTVDAEPRYEDHPIDFLPESGYFDDWDVRQAAYWGFLAGGFGITYGHHCVWPMNTEPTPYFPMHWREALGRPAATHMQHLKKLALSHNLLELLPDQGLVVVAYEGGDRLVAARGKQYAYVYSPTGKSVHARFGLLVGEQVAGSWYNPRSGETMAIGAWPNTGTLMLHPPSSGRGQDWVLVLDSR
>NZ_CP011388.1|WP_068605876.1|1972677_1973778_-|ABC-transporter-permease
MRSYLQLTLAQLRIFGRNRQVLFWSLFFPIFFMLMLGSFMGNGGGISITASVVNEDGTPQAAEFITALNQVPGINTKNKTGDREQELKALKDGDLQMLVVIPQGYGKALQEANKSNPVIINVFYDETEMTTSQVGVTMVGNVVDAVSKKATGYEEVASIQSQGVQSINLKYIDFLVPGIVAMMIMNNNLNGVAGQISSWRERGILRRMQSTPLQSSSFIAAQISARLLMNGMQAVIVLVIGSLVFGTQVNGSWLLLLSFVVLGTLAFMSIGFIIAGLAKTPESAGPIAGFISFPLIFLGGVFFPIKDMPEWLQGIVNLLPIAHLSTAMRQIMNVGAGFTEVWGELALLGGWTLAAFIVASLTFKWE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011388_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_5

2342721-2342907

Orphan

Consensus_repeat	Method
TTAAGTAGTGTTTCACTACTTAA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP011388_5

>merge|NZ_CP011388|5|2342721-2342907|CRISPRCasFinder
TTAAGTAGTGTTTCACTACTTAAATCAGCACCTTGGGCGAAATCTCAGAAATGAAGTAGTGTTTCACTACTTAATTGAGCCACTCGGCGCATTTGGGCAAGTTTTGGGGGAATTAAATAGCGATTTGCTATTTAATTCTGGGCTCCTGCCGCTCTTGAGCATATGAAGTTGTGTTTTACTACTTATA

>NZ_CP011388|5|5|2342721-2342907|CRISPRCasFinder
TTAAGTAGTGTTTCACTACTTAA	ATCAGCACCTTGGGCGAAATCTCAGAAA
TGAAGTAGTGTTTCACTACTTAA	TTGAGCCACTCGGCGCATTTGGGCAAGTTTTGGGGGAA
TTAAATAGCGATTTGCTATTTAA	TTCTGGGCTCCTGCCGCTCTTGAGCATA
TGAAGTTGTGTTTTACTACTTATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_068606177.1\|2327807_2329232_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP011388.1\|WP_068606202.1\|2351896_2354380_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376716
NZ_CP011388.1\|WP_082882451.1\|2326018_2327815_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP011388.1\|WP_068606203.1\|2354678_2356151_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP011388.1\|WP_068606187.1\|2337005_2339192_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606183.1\|2332080_2332968_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP011388.1\|WP_068611032.1\|2340223_2342404_-\|multicopper-oxidase-family-protein	unknown	unknown	gnl\|CDD\|225043
NZ_CP011388.1\|WP_068606178.1\|2329376_2331092_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270298
NZ_CP011388.1\|WP_082882450.1\|2324379_2325885_+\|glycoside-hydrolase-family-5-protein	unknown	unknown	gnl\|CDD\|365907
NZ_CP011388.1\|WP_082882453.1\|2356781_2357174_+\|DUF2500-domain-containing-protein	unknown	unknown	gnl\|CDD\|378475
NZ_CP011388.1\|WP_068606191.1\|2346746_2347640_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP011388.1\|WP_082882452.1\|2347709_2349239_-\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|350141
NZ_CP011388.1\|WP_068606196.1\|2349407_2350277_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP011388.1\|WP_157279834.1\|2350584_2350731_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606189.1\|2339224_2339749_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606185.1\|2333036_2336972_+\|cellulase-family-glycosylhydrolase	unknown	unknown	gnl\|CDD\|365907
NZ_CP011388.1\|WP_068606181.1\|2331171_2332062_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP011388.1\|WP_068606200.1\|2350887_2351784_+\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP011388.1\|WP_068606204.1\|2356231_2356756_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606190.1\|2343486_2346711_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_068606177.1\|2327807_2329232_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	5.04216e-45
NZ_CP011388.1\|WP_068606202.1\|2351896_2354380_-\|hypothetical-protein	gnl\|CDD\|376716	pfam02018, CBM_4_9, Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.	1.85081e-05
NZ_CP011388.1\|WP_082882451.1\|2326018_2327815_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.59623e-44
NZ_CP011388.1\|WP_068606203.1\|2354678_2356151_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.57028e-28
NZ_CP011388.1\|WP_068606200.1\|2350887_2351784_+\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	1.14684e-80
NZ_CP011388.1\|WP_068606191.1\|2346746_2347640_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	6.34734e-17
NZ_CP011388.1\|WP_068611032.1\|2340223_2342404_-\|multicopper-oxidase-family-protein	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.10304e-56
NZ_CP011388.1\|WP_068606178.1\|2329376_2331092_+\|extracellular-solute-binding-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	3.3652e-99
NZ_CP011388.1\|WP_082882450.1\|2324379_2325885_+\|glycoside-hydrolase-family-5-protein	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	3.30127e-28
NZ_CP011388.1\|WP_082882453.1\|2356781_2357174_+\|DUF2500-domain-containing-protein	gnl\|CDD\|378475	pfam10694, DUF2500, Protein of unknown function (DUF2500). The members of this family are largely confined to the Gammaproteobacteria. The function is not known.	7.11316e-29
NZ_CP011388.1\|WP_068606183.1\|2332080_2332968_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.271e-57
NZ_CP011388.1\|WP_082882452.1\|2347709_2349239_-\|family-43-glycosylhydrolase	gnl\|CDD\|350141	cd18820, GH43_LbAraf43-like, Glycosyl hydrolase family 43 proteins similar to Lactobacillus brevis alpha-L-arabinofuranosidase LbAraf43 and Geobacillus thermoleovorans GbtXyl43B. This uncharacterized glycosyl hydrolase family 43 (GH43) subgroup belongs to a subgroup which includes enzymes with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities, similar to Lactobacillus brevis alpha-L-arabinofuranosidase LbAraf43 and Geobacillus thermoleovorans IT-08 beta-xylosidase / exo-xylanase (GbtXyl43B). It belongs to the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	1.01986e-121
NZ_CP011388.1\|WP_068606196.1\|2349407_2350277_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	9.46756e-24
NZ_CP011388.1\|WP_068606185.1\|2333036_2336972_+\|cellulase-family-glycosylhydrolase	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.31389e-32
NZ_CP011388.1\|WP_068606181.1\|2331171_2332062_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	4.80278e-110
NZ_CP011388.1\|WP_068606190.1\|2343486_2346711_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0

>NZ_CP011388.1|WP_068611032.1|2340223_2342404_-|multicopper-oxidase-family-protein
MLFTTLLLLILSIFAANKATQLVYSQNCRELHRRSRRMIIRMFALTVSAVVMGFTVAFLIRDYAAIYWQDRLAALILLILLPVALLWARALPVLRKIRRKTKNMQDAANTPVEAALRGLAADPGLVVPFQMAAVGAGTALYFALVPPVPFRTLDVALPILVYGIAWAALWSRQERRSLAAGNPAWVAERRATRALKGLALLGAAAVIAGAGIFAGLANSRWPAELNMMAGTPDFGGGTAIMHSHGDGGAVAVSAARPEPLTSVTQLTGPRTGEPDRRFVLTAQDAVLTMASGKKVQAWTYNAEGPGPELRMKHGDLVEVTLANKDIEAGVTIHWHGLDVPNAEDGVAGATQNAVMPGETHTYRFRAEQTGTFWYHTHQESKTGVDKGLFGPLIVDPAEPESNSDAKSDLAAVHSSPPVPEEDITVMTHVWDDVGFAIGNHDGVQQRSIAPGTPVRMRFINTDDWVRQKYSLVGTDFRVTTIDGVALNKPDLLQDTHLEITTGGRMEATFIMPETPVFMSVNNSKKLGILITPLNSNSGSAPASVASTDFSIDAAIPEIPQTKAFDPASYGESAETPFDANSSFDRDFTMILDNKMGFFNGTLDMLYTLNGEVAPNTPMYMVREGDLVKTTIINRGSVDHPMHLHGHHLLVLTKNGKPISGSPWWSDTLDVLPGDTYEVAFRADNPGIWMDHCHNLVHAKAGMTMHLMYEGVVTPYTMGTQSGNHPE
>NZ_CP011388.1|WP_068606189.1|2339224_2339749_-|hypothetical-protein
MNLSKIKLYIILHIILLLFVACNQVDKEKVVEEDISIYFVKDLSTTEAMGKNLDDLPLENMPMLTDKNIKTYNWIRHEFTLSDGFSLEEELEGNVPLNGKPFVVVVNHRRIYLGAFWSPFSSLHIPEIPVIYTLWQKGSNSKHSYKIVIGKNQEDPRSNEDIFKALKGLGKLTN
>NZ_CP011388.1|WP_068606187.1|2337005_2339192_+|hypothetical-protein
MQRHSDRWIEIDLSWFHPGHTEQEAALLMRRLEPLYEQVKGDRGIVLNCGWVIDLITEWNGNGGQKLPFRTKLLSAWKDATYEDLRELVGHLQQSAESHGWFQFKVGVMFVGWGQFVALDDIYDIYSDWYERHPEMYPKTMRGLTDLNPSVLLKEDRTTYAAFPEGIAEGMSFPVFLGGQWGKLSRYLNLAAIHLRDQFLGALVYDRRGPFGTAAPEDPAVALEYSNGFVELYREVKQGNPEALVMGYSSAISAVAEWRVGCVDLETLVADGHIDIWIDQTWGGAWQDWWSTEWKGWTFQLANLLSHRGIVAGGNKHRVNPCKHYHLIEAWDSWEPWDTLHQVPDKLKWAIWAFAHAALKTPNGQLMTSDGSYLSWANNRSGELWSEEDVAFLAGHLNAAEKSAEQLEEVYGPTLIYNRSMLEALVAHSPKENASEWIDDQAALLMKWGVPCLSVSRMEWIGELSESVESAIIQVPGKLSEGERQEILAWNEKGVPMLMTGRADLLDTEVLRVAGADSAGEVLPTGYHPYRASCSEINAAFKYTLPIVHLPAHAAVEADPKRVLAVAGDTPVLTRGARNSVYWQPLDWKFADSPHLTISQLGDLYPYVHTASVWGELSASAGQSYVSGMEEHTPATFHHWKSGGTHYVLAGNLETGVAGDARFPREFNIHLSRSQLELQEAESYALVNVDSGAEVVGSLDGNEMVFRVYFEPEGSAVFRLVRNIKTAH
>NZ_CP011388.1|WP_068606185.1|2333036_2336972_+|cellulase-family-glycosylhydrolase
MKKMSAVQRTFSKILVLCLLVTAFGQPVFAAEGAEGNVVPDPGFESGTLQDWNDADPVKNAVVADSVYSGVYSLKQSGTWAAIYRNITLEPNTTYSLSGIGKAVNGSGVLKVKVVNGDWAEAPGAELTFRDADYTALSGEFTTPGSIAYAQVQIYTPQSDAFYIDDIEVKKAQLPAVDLPTLEDGVFQVNGTEITGPDGEPYVIKGVNVNGPNSWWPREITQDADLIENWGFNSVRVNACIHNCGWQNNNNTDRIVSAFTSKRMVVMFEAHDQTGEFFTETSTPSLAELTAWWTDLANKYKNNPYVWFNIMNEPGTDTLDPQWLSMHRHVVEAIRATGATNVIMADGMTWGQDSGKSKAGDVQVADSAILSYGSDLKAADPLGNMVFSIHTYGGWEYSNDKFQHFVEAVHAKGLALIVGEYGATTKGQFLEGTKNVFKYGIPNGIGRMVWSWDGGDDWELTTNDASGGGGWGINTDGTVKPTNLTWFGEKVWNDNHNIPMTMTDRDVSVERVLVSKADFAAGDTVRFQAALRNRGDELLEGDVAVRFEVNGAAVEGGTTDAPVTIDGYASAVSGEFTVPADVENLEVKAWIDRDSSTYGNDAVAANDEETVSFQGALEPYEGVDLVVSDIQVSPENLEYGSQAEFQVTVTNRGTEDARNDWIAGAFYVDGLKVTWGGEETALAAGESVTLTSVAKYKVKGPMQVSFQLDPSVHDIDTNLTNEGIFASIAVKEANYGNLLPNGQFETGLEDWTLWANTEGSSADAHTGAQSLKVRNGGAGGGGSYVDLEPNTTYVLSAWGRNSGAAGATSDVGFQYKPNVSSEQTKFFLHFEEKAWTHKQIMFTTGPQVLEGSGNVFVWKQDAEVEFYLDDIVLAKVPNLLLNSGFEAGEEDWMNWAGRTIDSAAPRTGANAFKIASGGAGGGGQELTLKPNTTYMLSAYGMNSGMPDGGPTDIGVKYKVMRGGVESVPHHFIHFDRDNKGIYEYNQVMFTTPGDFTNAQLFIWKQTPGVEFFADDLVLTEVPNQLLNAGFEEGETGWSNWSNRTIAETGALSGDKAFKVSAAGSGGGGQDIQLEPETTYVLGAWAKHSVASNDVTEIGVQYKDAGAQQIKHLMTFSGTAYEYKEILFTTPKYMNGTNVFIWKNGQQAELLADDLILTKVPSTHSNPAQEAVAEPEPVAIVVEGIEDNGLYNAAKTISFNTGTAALNGENFVSGTTVSAEGTHTLVVTGNVTKTVKFTLDFKPPILTGVLEGNMYKKSVAPTFSEGTALLDGVAYASGTPIQTDGLHRLVLTDAAGNATTVNFTVKGKKDKK
>NZ_CP011388.1|WP_068606183.1|2332080_2332968_+|carbohydrate-ABC-transporter-permease
MVVSRTAGSKIADGIILIALLLMAFLCIAPLLHVAAISLSDSAKVSAGLVSFLPLGINFDSYIKIMNDSRFYEAFGISVQRVLLGGLINFVLCVLMAYPLSREKSEFKPRNLYMWFLIFTMMFSAGLVPTYITIKSLHLMDTIWALVLPGAVPVFNLILLVNFFRNLPKELDEAAYMDGAGPLYLLFYVYIPLSLPAIATITLFSIVGHWNSFFDGLIYMNYPENFPLQTYISQVVINIDPNNITNVNDVSALAAISNRTLSAAKIFLSMLPILLIYPFLQRYFITGITLGSVKE
>NZ_CP011388.1|WP_068606181.1|2331171_2332062_+|sugar-ABC-transporter-permease
MKNNGFSTIYHLMLLPGIILLLIFSIYPMHGILMAFQDFNPAKGVWESELIGLDNFKYMFTLPDAKDVFVNTITISAMKLTANLLFALVFALMLNEIRQRFVKKSIQTVVYLPHFLSWVLVAGIFKDMFSLDGFINQIVSFLGFQEIMFFSSNTWFPAILVGSEVWKEFGFGAIVFLAALTGISPSLYEAAAIDGASRTRQLWHITLPSIASVIVLLAVLSLRSVLDAGFDQVFNMYNKLVYPSGDIIDTYVYRIGLVKLQFELATAVGLLKSVVSFILIIISYQLAYRFANYRIF
>NZ_CP011388.1|WP_068606178.1|2329376_2331092_+|extracellular-solute-binding-protein
MTHATWNKSWIAGLLVLMMLVITACSGNGNTENAAQGNGKNNGNQAETPTEPAEVPEPFGMYKEPVELKIGKSTIAEPKFPEGETWADNEYYRHLQKTLNISVKHAWEADGSSSAYKDKVNLSIASNDLPDAFSLVNRDQLAELVKNDMIEDLTEVYEKYVSPEYKAVIDSTNGQAIAEVTVDGKMFAIPTAREVTPNLVWVRQDWLDTLKLQAPKSVDDVLAVAKAFKAADLDKTGKAVGLTGVEKFVSDGNEMHGYELLFNAYELYPMQWTKGQDGTIAYGGIQPGVKDVLAKLAQAFKDGLIDREFATKDAGKANEVLTSGQGGIAVLPWWAPGWPLQDSVKNSGGKAVWKAYPIIGANGKYNGEQNGILNSMYVVRKGYEHPEALVKLVNWEFKLKQRGYPELNELMDNGIYKEIKRRGTPFEVNAARMDEIQFLAGVIQQGVKGEITKEEAAKLHPEAWDKVERIQKYRANPDPMADTALWADDTQWTIGAPALVAAEQNVHFNVFTGITKGMENKKSILDDLLIQSYLKIIYGEESVDYFDTFVEQWKSQGGDEITKEVQEQVAK
>NZ_CP011388.1|WP_068606177.1|2327807_2329232_+|response-regulator
MIRAIIVDDEKLVRKGLISMMPWQAFGIDIIADAPSVAKALELLQQQEADLLITDLTMPSMSGFELMREVRQHYPHMRVVVLTCHQDFDYIQEALRLGAIDYIVKTQLEKEKTEDVLGRIVNRMCEENTRDPKLPATAVMQAEAKSERGFLLCGTGKSTKVADLYAIPWVRTGSLYEVEQGTWLVPRPSDAVVASDIQAFLDADVPEWILVEVEGMRGLPIGEVCRLLKEYKQGELFYEWQRDTRVYNVSASAIEKEHADQEDTQISRIKERWSMPNWVLDDKLYGELLADIELQRLPSIHVKRSFYAAMALWEVWFKDRKQLNQWNDQVEDLLYWEDWSEWLDSTRKHLRTVLGAVPHSEEVVRSIYKAVEYMKTHVGKEVNQREVAKAVNMSRSYFSQCFKDITGLAFGEMLRDARIESAKTQLLQTQQPIYWIAEQSGFQDEKYFRRIFKEQTGMTPTEYRATSMRGSSVR
>NZ_CP011388.1|WP_082882451.1|2326018_2327815_+|sensor-histidine-kinase
MRMKGSTDVLNTWKRWMWPSSLKARLTIVILLSSAIPLLLIGIISSYAIDNVESNVRDGVISTLKQVRIDTEKTLEMLDFASRQFVTINGTVGGGLRELFEAERNNTYFEFFRETNKVRERFTLVGFTNPNVGVMFYHMPDQDKIMFENRTIGTDFQPDRMPMLTDRKVYQNFGPHPTVSQGQDALVLSIYREVEQIDSKPVYIYIETHLDLLKELFRRDKYGVDTIHILTDAAGQVMYSDDRERYPTGSLQPRFLKEAASDDHYDFYYEKSRQGWQVIAGVHKAGFNQAKTGWTIRYALVGIFTLAVSLLLGWAIWRTVYRPLIQFSREIKAMGTNIHHELSDQDRMAEFNVLFVQFDQMRRQVLELFLEVERKERRKQELEVEKLLVQINPHFLHNTLNTIQWLARMQGNDDIDKLVSVFTRVLHYNLGKEGGIVKIKEEVQALEDYVSLQRIRYDYEFDVRIIVTAETLEVPIPRFVLQPLVENALYHGLRDEGGMIEVHIRHSRNDMVEVTVRDNGAGMSEETKARLLLPDTGERRKSGLGIGLRFVDRMMKMHYGEAFGLQVESELGEGTTMRLRIPTGEGKLEQPQGGEQHD
>NZ_CP011388.1|WP_082882450.1|2324379_2325885_+|glycoside-hydrolase-family-5-protein
MIKQAIQIIKGMTLMRKRSSWKGVAVYVLLLALMFGTVNFASVTTTEAAGDSYTVSGTKIMKNGTEFILNGTNVNGPQWCWGSNTVNDANLIVNKWKFNSIRVNTHILAKGCDFQPTLQQIVDTYTPLGAVVMIEAHEDARIGNYYTSTTSPTLTELKNYWINLANQFKNNSNVWFNIANEPGDWNLDAQWKTMHKTVIEAIRGTGATNIIVVDGGTFGQDCGYSQAGNVVDGDSAVISWGQEVKSYDTTGNTIFSVHNYGCWDWSESKLTDYVNRVHAKNLALVFGEWGAQTGGEHQTAAQNTVNVSQAKKVGKMVWHWDGGDAFDLTNTGGGWGGDINRTDGTKPTNLTWLGSKVWDANRYTGSVAAKLSGTLYGTTPAFNGTDTFHKAMDGNTGTFFDYANSDGGYVGLDLGASVTKQITKVRLYPRSGMAYRMDGGKIQGSNTSSTSGFTDLGTVSSAQNAVWHEVTVTNTTKYRYVRYLSPSGSHCNVAELEFWGK
>NZ_CP011388.1|WP_068606190.1|2343486_2346711_+|efflux-RND-transporter-permease-subunit
MKGIIRFSLNNKFALWILTIIITVAGVYSGLTMKQETLPNLEIPILQVTTVYPGAAPDEIVNQLTIPLEQRIKNLNGVKTVTSMSMENVSSLTVEYDYNQDMDKAATEAREAMAGIQLPANVKAPEVSRISLNAFPVISLSLTDEKRSLEELTKLVEDEMKPALEGINGVASVEISGQHLKEVQLKFNQAKMQELGLSEDTVKGIVQGSALKAPLGLFEMEGTEKTVVVDGNIVSLDQLKNLAIPVIPGGAAQGAPGMGSPGGAAPGAPGMGAPGATAPGAAPTAGEAAAPGTAPATPALPGGNAAAAGIPTVQLQDIADIKLVGKAESISRTNGKESIGFQVVKAPDANTVDVVNAVKEEAEQLKQDNPGLTLTTMLDQGKPIEESVKTMLSKALFGALFAVVIILLFLRNFRTTIISIVSIPLSLLIGVLLLKQLDITLNMMSLGAMTVAIGRVVDDSIVVIENIYRRMSMSTEKLRGKELILDATREMFLPILSSTIVTIAVFLPLGLVSGLVGELFLPFALTMVFALLASLLVAITIVPMLGHSMFKKGVTGQKHEDKPGKLAEFYKSVLRWSLNHKLITVALAVLLLIGSFALVPMIGVSFIPEEEEKYAMVTYTPAPGEVIGEVEKSALAAEKYVLAQEQVTDVSYSVGGKNPLSPGPSKSALFYVMYDSEVDDFAKVKEDLVTGLQEQKTGKGEWKELDVSGAGVGGSNLALSVFGENLEDIKPVVNQIEKLAQENEAFEDVETSLSQTYEQYTLVADQEKLSSLGLTAGQIAMTLSPVRDRPVLTEINVDGKLYNVYIEVDPTKYNNIQDIENVKVTSPLGIQVPLKDVVTVKEGESPNTITRKDDRMYVEVSAKIVTADVAKASSDLQKKVEALDLPSNVDVQFGGVTEQINETFTQLGLAMLAAIAIVYLVLVITFGGALAPFAILFSLPFAIIGGLVGLLVTGETISVSVMMGALMLIGIVVTNAIVLLDRVIHKEREGYTTREALMEAAGTRLRPILMTALATIGALLPLALGFEGSGIISKGLGVTVIGGLLSSTLLTLIIVPVVYEFLMKFKKKQVEDRI
>NZ_CP011388.1|WP_068606191.1|2346746_2347640_+|TetR/AcrR-family-transcriptional-regulator
MSDKKIQIINAAMQCFAHKGFHATTIQEIADKAGIAKGSLYFYFESKEALLMSSFHYYHEQMVSSILVYVNDRSLSPREKLSLQVEERFRQVLSQRDFIAMLMNEQNMPINEELKAFIFMLKGEVLYRFHSGLADIYGEAGRPYALDGASLLNAMFHEYISCIIWDGKELDPRELTVFMMHRMDDVMNGMMARAGKPILTESLMADLLRAGKQVGDEDDVPLSVKEIAKLHEFLEKSDLAGKEKESLLSSMLLLENELRKPEPEVIIVRGMIAFLRGFKVNGFRKVLSSIEAMVVKE
>NZ_CP011388.1|WP_082882452.1|2347709_2349239_-|family-43-glycosylhydrolase
MKRKCIMRIRFMFTSLVVLSLIISLISGASASVGNTFNNPTVPMYSADPHVYKHTDGYYYYVQTEWKDIKIWRSSSLTKLTEGVNKVVFTSPQTGPNAQDYWAQEIHHINGKWYIYYTATCWNCGNNERRMFVMENSNPNPLQGSWVQKGKIADPNMDTFAIDGTVFSHNGILYYSWSGWENGGSTQKVFIARMSNPWTLDTGSTLLVSPDLWWEQEGYAIAEAPIFLKRNGKVFLVYSASFCGTENYRLGMLTASDNANLLSASSWTKSSNPIFEKSPANSVYGPGHNAFTVSPDGSEDWNIYHASPNPGQGGCGSGQYRDVRVQKVNWNSNGSPNLGVPASTSTALPVPSGEIGASPLIPNAGFEVDTKSANGANVQSPSHWLSYCSTHCDAEFSENYDGAHSGSYHGTHWKNTAYETYTYQVITDLPNGTYKASAWVRRGGNQASALFEAIQYGGTAKTVTLPVTNTWTKVEITNIQVTNGQVQLGFYSKANANDWIHFDDIELVK
>NZ_CP011388.1|WP_068606196.1|2349407_2350277_+|helix-turn-helix-domain-containing-protein
MADVGIIEYVDRFEDTQTGIADESFIARNIISNMIQHAHPHAELTFILGGSGMFVDPQGSSMNVKSGSVLFIPGLLRHGFTTSTGWRGISVHYHPERLDGYGRLLHKQLLQFQNQQIVTYKMNEPALSHICKLIELLNSEINLTGPHLEKSRALLLNLMLVHIHSVGKPESAARKPGSKGVQLEVAEVVAELERSFQDGINIDSIISNYGHSPSFFRKVFKESTGVSPKKYVMRLRLDHAKSLIRDTSVSITQAAYDSGFSSLTQFNTAFYKDVGMTPKAWRILNRVKP
>NZ_CP011388.1|WP_157279834.1|2350584_2350731_-|hypothetical-protein
MADTDYGRKIVLLIVVAVVVASFLSGDGEDEDDTLGEDATSTPIIFGR
>NZ_CP011388.1|WP_068606200.1|2350887_2351784_+|diacylglycerol-kinase-family-lipid-kinase
MYSRALLIYNGNAGQAETHRVLGAAVAILSPAIAELTLMPTQSQGDTERICRERGEDYELVIVLGGDGTVHECVNGLAPLEKPPIVGILPGGTCNDFARSLHVPLDIEQAAQAIVNGLMRPVDIGQAGERFFSNFYGIGLITDTSENINSGLKGMFGKLSYFVSTLQTLKAAKSFAYRLDMGDRVVDGEAVMVLVSNGRSIGTSALPTPLDALRDGLLDVFIIREAGIPLLIEVLSQKTSQNWDPEKSQIDYFQAPVIELTTNEPMRADTDGEIYTETPVRLSVVREKLRFITGLAQG
>NZ_CP011388.1|WP_068606202.1|2351896_2354380_-|hypothetical-protein
MKQGLKRAGMLLMALLLMLASVQLSPPRTATAANLITNNGFESGFTNWNNTNSSNITVGTSEFRSGSKSARIQGSASWGALQSASIAVTPNTNYAFTYYYKGGAGLRAVVCYDNGSWQEIQADNVTAASNWTQRTIQFNSGSHSSIFVILQDSGNVTGYFDDLNLDVDGAAAPNLLANPGFEMNLQNWASFGTPSVISVSSSEYRSGSKSLRMAGTGSWGSLQSNAIAVNANTNYTLTYYYKGGSGLRVAICYDDGGWKDIQADATLSAAGWTQRTVQFNTGARTSIFIVLQDSTGVTGHFDDLKLAPASGSGGDPGGGGSGGSNATSAVGTNLSEINSYDNHFPFVNMAFNSLGWFTNYPSWGQELSANQLTGTKYLPAGTNGYLAVFWDLKQAISGSYVVKWDGSATVSLDSNGSGSISVTSSAANRIAFNASNIRFLFLRVQNNSSSNPISNIRVTKAADENNTNLFAQSFIDDWKSFKYFRFMDWMTTNSNQSVAGPADYPDPGALINHPVSIDKMVALCNQTNADMWITIPVKASDALVDELAQYAATHLNSGLQVYVELGNEVWNMAGPFVWQQQYAAAEARRLSLSNTGNNWEDAPVWYAWRSEQIHDRFESKLGAARVQNVIAWQTEAWWVNKVLDYYNNYNEGGANAEMMATAPYFGGDLGLAKYESTVQNWTLNDLFQELRYGTKLAGDTELTYIDRSIAKAQEVKATIDNYPGVVYITYEGGQHLTEVNDDGSGENTAITSLFTSANRDARMGDLYTYYLDRWKAIGGRYFTNFSTVGPYSKYGSWAVKESETHTRAQSPKYDKLLSWIVNNPKWW
>NZ_CP011388.1|WP_068606203.1|2354678_2356151_+|helix-turn-helix-transcriptional-regulator
MIVNQYMLENSTEMRFNYENASFPVYIAPIDTAWNVKHVLHWHTNIELVYQVRGYNVIYTASGTLRLYEGQVAVLHPGELHCHSVEDANGYFYVISLDLRILITGEVEAPHNRFIQSLLEHRLRLHTLLTGEERWEQEVMAELRSMIELYTARPKEWEFLLASGMYRALSLFLNNGKTKPSKGRPIHKSEVKMRQLRQAIGYIHDHYDRELSIQDIAEFISMNPFQLIRLFRSCTGKTPIEYLHSCRVREAVRLLQTTDKKIMQVAMDTGFGNLSYFNAVFRKYTQCTPTVMRNSYRTLEPRTLPQGWVSADIGSGGAEGSASSMNQAYYVNGGGFDIGGERDAFHYCYTKWTGDFTVSCRIVCIVRTHIWAKAGIMIRDSLRDDGKFIHMYATPHSTLGLAWRPRAGADCEKLRTYHHVNCLDTPVFVKLERRGGRFTAAYSMDGVNWLPFPHASAELKLPDHVYIGFAVSSHDRQRVCSAKFDQMRMY
>NZ_CP011388.1|WP_068606204.1|2356231_2356756_+|hypothetical-protein
MPDRRQARLFIFPIMVSILLLLVVGCGTKEEPAMPETMPADFEFSVRYGITSKNAINTFEDKVTKDLVSDGTITVDLAFSETEMRSIYDRMRELNVLRDLKLESRIKNCFQTPFTEDYWKIQMNGETRIFHWSEENCSLTKDAAKLKELREFVHMIVSAQKVYTDLPKAKGGYH
>NZ_CP011388.1|WP_082882453.1|2356781_2357174_+|DUF2500-domain-containing-protein
MSDFNMDPGFFGAMGELPLFFKLFMGTVFILVVGGFLHVIVRGLWVWSKNNASDLVTTVATVRDKRIHVWGGSGESSANTEHYVTFEMDDQSRIELPVREDKYGLIVVGDRGELTHQGTRFKEFHRSIQS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011388_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_6

2343006-2343191

Orphan

Consensus_repeat	Method
TTAAGTAGTGTTTCACTACTTAA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP011388_6

>merge|NZ_CP011388|6|2343006-2343191|CRISPRCasFinder
TTAAGTAGTGTTTCACTACTTAAATCAGCCCCTTTGGCGAAATCTCAGAAATGAAGTAGTATTTCACTACTTATTTAGGCTCCCCGGCGCATTTTGGCGTGTTCTGGGGGAATTAAATAGCGATTTGCTAATTAATTCCGGTCTCCTGCAACTCTTGGTCACATCAGGTAGTGTTTCACTACTTAA

>NZ_CP011388|6|6|2343006-2343191|CRISPRCasFinder
TTAAGTAGTGTTTCACTACTTAA	ATCAGCCCCTTTGGCGAAATCTCAGAAA
TGAAGTAGTATTTCACTACTTAT	TTAGGCTCCCCGGCGCATTTTGGCGTGTTCTGGGGGAA
TTAAATAGCGATTTGCTAATTAA	TTCCGGTCTCCTGCAACTCTTGGTCACA
TCAGGTAGTGTTTCACTACTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_068606177.1\|2327807_2329232_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP011388.1\|WP_068606202.1\|2351896_2354380_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376716
NZ_CP011388.1\|WP_082882451.1\|2326018_2327815_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP011388.1\|WP_068606203.1\|2354678_2356151_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP011388.1\|WP_068606187.1\|2337005_2339192_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606183.1\|2332080_2332968_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP011388.1\|WP_068611032.1\|2340223_2342404_-\|multicopper-oxidase-family-protein	unknown	unknown	gnl\|CDD\|225043
NZ_CP011388.1\|WP_068606178.1\|2329376_2331092_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270298
NZ_CP011388.1\|WP_082882450.1\|2324379_2325885_+\|glycoside-hydrolase-family-5-protein	unknown	unknown	gnl\|CDD\|365907
NZ_CP011388.1\|WP_082882453.1\|2356781_2357174_+\|DUF2500-domain-containing-protein	unknown	unknown	gnl\|CDD\|378475
NZ_CP011388.1\|WP_068606191.1\|2346746_2347640_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP011388.1\|WP_082882452.1\|2347709_2349239_-\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|350141
NZ_CP011388.1\|WP_068606196.1\|2349407_2350277_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP011388.1\|WP_157279834.1\|2350584_2350731_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606189.1\|2339224_2339749_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606185.1\|2333036_2336972_+\|cellulase-family-glycosylhydrolase	unknown	unknown	gnl\|CDD\|365907
NZ_CP011388.1\|WP_068606181.1\|2331171_2332062_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP011388.1\|WP_068606200.1\|2350887_2351784_+\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP011388.1\|WP_068606204.1\|2356231_2356756_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606190.1\|2343486_2346711_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_068606177.1\|2327807_2329232_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	5.04216e-45
NZ_CP011388.1\|WP_068606202.1\|2351896_2354380_-\|hypothetical-protein	gnl\|CDD\|376716	pfam02018, CBM_4_9, Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.	1.85081e-05
NZ_CP011388.1\|WP_082882451.1\|2326018_2327815_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.59623e-44
NZ_CP011388.1\|WP_068606203.1\|2354678_2356151_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.57028e-28
NZ_CP011388.1\|WP_068606200.1\|2350887_2351784_+\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	1.14684e-80
NZ_CP011388.1\|WP_068606191.1\|2346746_2347640_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	6.34734e-17
NZ_CP011388.1\|WP_068611032.1\|2340223_2342404_-\|multicopper-oxidase-family-protein	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.10304e-56
NZ_CP011388.1\|WP_068606178.1\|2329376_2331092_+\|extracellular-solute-binding-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	3.3652e-99
NZ_CP011388.1\|WP_082882450.1\|2324379_2325885_+\|glycoside-hydrolase-family-5-protein	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	3.30127e-28
NZ_CP011388.1\|WP_082882453.1\|2356781_2357174_+\|DUF2500-domain-containing-protein	gnl\|CDD\|378475	pfam10694, DUF2500, Protein of unknown function (DUF2500). The members of this family are largely confined to the Gammaproteobacteria. The function is not known.	7.11316e-29
NZ_CP011388.1\|WP_068606183.1\|2332080_2332968_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.271e-57
NZ_CP011388.1\|WP_082882452.1\|2347709_2349239_-\|family-43-glycosylhydrolase	gnl\|CDD\|350141	cd18820, GH43_LbAraf43-like, Glycosyl hydrolase family 43 proteins similar to Lactobacillus brevis alpha-L-arabinofuranosidase LbAraf43 and Geobacillus thermoleovorans GbtXyl43B. This uncharacterized glycosyl hydrolase family 43 (GH43) subgroup belongs to a subgroup which includes enzymes with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities, similar to Lactobacillus brevis alpha-L-arabinofuranosidase LbAraf43 and Geobacillus thermoleovorans IT-08 beta-xylosidase / exo-xylanase (GbtXyl43B). It belongs to the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	1.01986e-121
NZ_CP011388.1\|WP_068606196.1\|2349407_2350277_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	9.46756e-24
NZ_CP011388.1\|WP_068606185.1\|2333036_2336972_+\|cellulase-family-glycosylhydrolase	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.31389e-32
NZ_CP011388.1\|WP_068606181.1\|2331171_2332062_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	4.80278e-110
NZ_CP011388.1\|WP_068606190.1\|2343486_2346711_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0

>NZ_CP011388.1|WP_068611032.1|2340223_2342404_-|multicopper-oxidase-family-protein
MLFTTLLLLILSIFAANKATQLVYSQNCRELHRRSRRMIIRMFALTVSAVVMGFTVAFLIRDYAAIYWQDRLAALILLILLPVALLWARALPVLRKIRRKTKNMQDAANTPVEAALRGLAADPGLVVPFQMAAVGAGTALYFALVPPVPFRTLDVALPILVYGIAWAALWSRQERRSLAAGNPAWVAERRATRALKGLALLGAAAVIAGAGIFAGLANSRWPAELNMMAGTPDFGGGTAIMHSHGDGGAVAVSAARPEPLTSVTQLTGPRTGEPDRRFVLTAQDAVLTMASGKKVQAWTYNAEGPGPELRMKHGDLVEVTLANKDIEAGVTIHWHGLDVPNAEDGVAGATQNAVMPGETHTYRFRAEQTGTFWYHTHQESKTGVDKGLFGPLIVDPAEPESNSDAKSDLAAVHSSPPVPEEDITVMTHVWDDVGFAIGNHDGVQQRSIAPGTPVRMRFINTDDWVRQKYSLVGTDFRVTTIDGVALNKPDLLQDTHLEITTGGRMEATFIMPETPVFMSVNNSKKLGILITPLNSNSGSAPASVASTDFSIDAAIPEIPQTKAFDPASYGESAETPFDANSSFDRDFTMILDNKMGFFNGTLDMLYTLNGEVAPNTPMYMVREGDLVKTTIINRGSVDHPMHLHGHHLLVLTKNGKPISGSPWWSDTLDVLPGDTYEVAFRADNPGIWMDHCHNLVHAKAGMTMHLMYEGVVTPYTMGTQSGNHPE
>NZ_CP011388.1|WP_068606189.1|2339224_2339749_-|hypothetical-protein
MNLSKIKLYIILHIILLLFVACNQVDKEKVVEEDISIYFVKDLSTTEAMGKNLDDLPLENMPMLTDKNIKTYNWIRHEFTLSDGFSLEEELEGNVPLNGKPFVVVVNHRRIYLGAFWSPFSSLHIPEIPVIYTLWQKGSNSKHSYKIVIGKNQEDPRSNEDIFKALKGLGKLTN
>NZ_CP011388.1|WP_068606187.1|2337005_2339192_+|hypothetical-protein
MQRHSDRWIEIDLSWFHPGHTEQEAALLMRRLEPLYEQVKGDRGIVLNCGWVIDLITEWNGNGGQKLPFRTKLLSAWKDATYEDLRELVGHLQQSAESHGWFQFKVGVMFVGWGQFVALDDIYDIYSDWYERHPEMYPKTMRGLTDLNPSVLLKEDRTTYAAFPEGIAEGMSFPVFLGGQWGKLSRYLNLAAIHLRDQFLGALVYDRRGPFGTAAPEDPAVALEYSNGFVELYREVKQGNPEALVMGYSSAISAVAEWRVGCVDLETLVADGHIDIWIDQTWGGAWQDWWSTEWKGWTFQLANLLSHRGIVAGGNKHRVNPCKHYHLIEAWDSWEPWDTLHQVPDKLKWAIWAFAHAALKTPNGQLMTSDGSYLSWANNRSGELWSEEDVAFLAGHLNAAEKSAEQLEEVYGPTLIYNRSMLEALVAHSPKENASEWIDDQAALLMKWGVPCLSVSRMEWIGELSESVESAIIQVPGKLSEGERQEILAWNEKGVPMLMTGRADLLDTEVLRVAGADSAGEVLPTGYHPYRASCSEINAAFKYTLPIVHLPAHAAVEADPKRVLAVAGDTPVLTRGARNSVYWQPLDWKFADSPHLTISQLGDLYPYVHTASVWGELSASAGQSYVSGMEEHTPATFHHWKSGGTHYVLAGNLETGVAGDARFPREFNIHLSRSQLELQEAESYALVNVDSGAEVVGSLDGNEMVFRVYFEPEGSAVFRLVRNIKTAH
>NZ_CP011388.1|WP_068606185.1|2333036_2336972_+|cellulase-family-glycosylhydrolase
MKKMSAVQRTFSKILVLCLLVTAFGQPVFAAEGAEGNVVPDPGFESGTLQDWNDADPVKNAVVADSVYSGVYSLKQSGTWAAIYRNITLEPNTTYSLSGIGKAVNGSGVLKVKVVNGDWAEAPGAELTFRDADYTALSGEFTTPGSIAYAQVQIYTPQSDAFYIDDIEVKKAQLPAVDLPTLEDGVFQVNGTEITGPDGEPYVIKGVNVNGPNSWWPREITQDADLIENWGFNSVRVNACIHNCGWQNNNNTDRIVSAFTSKRMVVMFEAHDQTGEFFTETSTPSLAELTAWWTDLANKYKNNPYVWFNIMNEPGTDTLDPQWLSMHRHVVEAIRATGATNVIMADGMTWGQDSGKSKAGDVQVADSAILSYGSDLKAADPLGNMVFSIHTYGGWEYSNDKFQHFVEAVHAKGLALIVGEYGATTKGQFLEGTKNVFKYGIPNGIGRMVWSWDGGDDWELTTNDASGGGGWGINTDGTVKPTNLTWFGEKVWNDNHNIPMTMTDRDVSVERVLVSKADFAAGDTVRFQAALRNRGDELLEGDVAVRFEVNGAAVEGGTTDAPVTIDGYASAVSGEFTVPADVENLEVKAWIDRDSSTYGNDAVAANDEETVSFQGALEPYEGVDLVVSDIQVSPENLEYGSQAEFQVTVTNRGTEDARNDWIAGAFYVDGLKVTWGGEETALAAGESVTLTSVAKYKVKGPMQVSFQLDPSVHDIDTNLTNEGIFASIAVKEANYGNLLPNGQFETGLEDWTLWANTEGSSADAHTGAQSLKVRNGGAGGGGSYVDLEPNTTYVLSAWGRNSGAAGATSDVGFQYKPNVSSEQTKFFLHFEEKAWTHKQIMFTTGPQVLEGSGNVFVWKQDAEVEFYLDDIVLAKVPNLLLNSGFEAGEEDWMNWAGRTIDSAAPRTGANAFKIASGGAGGGGQELTLKPNTTYMLSAYGMNSGMPDGGPTDIGVKYKVMRGGVESVPHHFIHFDRDNKGIYEYNQVMFTTPGDFTNAQLFIWKQTPGVEFFADDLVLTEVPNQLLNAGFEEGETGWSNWSNRTIAETGALSGDKAFKVSAAGSGGGGQDIQLEPETTYVLGAWAKHSVASNDVTEIGVQYKDAGAQQIKHLMTFSGTAYEYKEILFTTPKYMNGTNVFIWKNGQQAELLADDLILTKVPSTHSNPAQEAVAEPEPVAIVVEGIEDNGLYNAAKTISFNTGTAALNGENFVSGTTVSAEGTHTLVVTGNVTKTVKFTLDFKPPILTGVLEGNMYKKSVAPTFSEGTALLDGVAYASGTPIQTDGLHRLVLTDAAGNATTVNFTVKGKKDKK
>NZ_CP011388.1|WP_068606183.1|2332080_2332968_+|carbohydrate-ABC-transporter-permease
MVVSRTAGSKIADGIILIALLLMAFLCIAPLLHVAAISLSDSAKVSAGLVSFLPLGINFDSYIKIMNDSRFYEAFGISVQRVLLGGLINFVLCVLMAYPLSREKSEFKPRNLYMWFLIFTMMFSAGLVPTYITIKSLHLMDTIWALVLPGAVPVFNLILLVNFFRNLPKELDEAAYMDGAGPLYLLFYVYIPLSLPAIATITLFSIVGHWNSFFDGLIYMNYPENFPLQTYISQVVINIDPNNITNVNDVSALAAISNRTLSAAKIFLSMLPILLIYPFLQRYFITGITLGSVKE
>NZ_CP011388.1|WP_068606181.1|2331171_2332062_+|sugar-ABC-transporter-permease
MKNNGFSTIYHLMLLPGIILLLIFSIYPMHGILMAFQDFNPAKGVWESELIGLDNFKYMFTLPDAKDVFVNTITISAMKLTANLLFALVFALMLNEIRQRFVKKSIQTVVYLPHFLSWVLVAGIFKDMFSLDGFINQIVSFLGFQEIMFFSSNTWFPAILVGSEVWKEFGFGAIVFLAALTGISPSLYEAAAIDGASRTRQLWHITLPSIASVIVLLAVLSLRSVLDAGFDQVFNMYNKLVYPSGDIIDTYVYRIGLVKLQFELATAVGLLKSVVSFILIIISYQLAYRFANYRIF
>NZ_CP011388.1|WP_068606178.1|2329376_2331092_+|extracellular-solute-binding-protein
MTHATWNKSWIAGLLVLMMLVITACSGNGNTENAAQGNGKNNGNQAETPTEPAEVPEPFGMYKEPVELKIGKSTIAEPKFPEGETWADNEYYRHLQKTLNISVKHAWEADGSSSAYKDKVNLSIASNDLPDAFSLVNRDQLAELVKNDMIEDLTEVYEKYVSPEYKAVIDSTNGQAIAEVTVDGKMFAIPTAREVTPNLVWVRQDWLDTLKLQAPKSVDDVLAVAKAFKAADLDKTGKAVGLTGVEKFVSDGNEMHGYELLFNAYELYPMQWTKGQDGTIAYGGIQPGVKDVLAKLAQAFKDGLIDREFATKDAGKANEVLTSGQGGIAVLPWWAPGWPLQDSVKNSGGKAVWKAYPIIGANGKYNGEQNGILNSMYVVRKGYEHPEALVKLVNWEFKLKQRGYPELNELMDNGIYKEIKRRGTPFEVNAARMDEIQFLAGVIQQGVKGEITKEEAAKLHPEAWDKVERIQKYRANPDPMADTALWADDTQWTIGAPALVAAEQNVHFNVFTGITKGMENKKSILDDLLIQSYLKIIYGEESVDYFDTFVEQWKSQGGDEITKEVQEQVAK
>NZ_CP011388.1|WP_068606177.1|2327807_2329232_+|response-regulator
MIRAIIVDDEKLVRKGLISMMPWQAFGIDIIADAPSVAKALELLQQQEADLLITDLTMPSMSGFELMREVRQHYPHMRVVVLTCHQDFDYIQEALRLGAIDYIVKTQLEKEKTEDVLGRIVNRMCEENTRDPKLPATAVMQAEAKSERGFLLCGTGKSTKVADLYAIPWVRTGSLYEVEQGTWLVPRPSDAVVASDIQAFLDADVPEWILVEVEGMRGLPIGEVCRLLKEYKQGELFYEWQRDTRVYNVSASAIEKEHADQEDTQISRIKERWSMPNWVLDDKLYGELLADIELQRLPSIHVKRSFYAAMALWEVWFKDRKQLNQWNDQVEDLLYWEDWSEWLDSTRKHLRTVLGAVPHSEEVVRSIYKAVEYMKTHVGKEVNQREVAKAVNMSRSYFSQCFKDITGLAFGEMLRDARIESAKTQLLQTQQPIYWIAEQSGFQDEKYFRRIFKEQTGMTPTEYRATSMRGSSVR
>NZ_CP011388.1|WP_082882451.1|2326018_2327815_+|sensor-histidine-kinase
MRMKGSTDVLNTWKRWMWPSSLKARLTIVILLSSAIPLLLIGIISSYAIDNVESNVRDGVISTLKQVRIDTEKTLEMLDFASRQFVTINGTVGGGLRELFEAERNNTYFEFFRETNKVRERFTLVGFTNPNVGVMFYHMPDQDKIMFENRTIGTDFQPDRMPMLTDRKVYQNFGPHPTVSQGQDALVLSIYREVEQIDSKPVYIYIETHLDLLKELFRRDKYGVDTIHILTDAAGQVMYSDDRERYPTGSLQPRFLKEAASDDHYDFYYEKSRQGWQVIAGVHKAGFNQAKTGWTIRYALVGIFTLAVSLLLGWAIWRTVYRPLIQFSREIKAMGTNIHHELSDQDRMAEFNVLFVQFDQMRRQVLELFLEVERKERRKQELEVEKLLVQINPHFLHNTLNTIQWLARMQGNDDIDKLVSVFTRVLHYNLGKEGGIVKIKEEVQALEDYVSLQRIRYDYEFDVRIIVTAETLEVPIPRFVLQPLVENALYHGLRDEGGMIEVHIRHSRNDMVEVTVRDNGAGMSEETKARLLLPDTGERRKSGLGIGLRFVDRMMKMHYGEAFGLQVESELGEGTTMRLRIPTGEGKLEQPQGGEQHD
>NZ_CP011388.1|WP_082882450.1|2324379_2325885_+|glycoside-hydrolase-family-5-protein
MIKQAIQIIKGMTLMRKRSSWKGVAVYVLLLALMFGTVNFASVTTTEAAGDSYTVSGTKIMKNGTEFILNGTNVNGPQWCWGSNTVNDANLIVNKWKFNSIRVNTHILAKGCDFQPTLQQIVDTYTPLGAVVMIEAHEDARIGNYYTSTTSPTLTELKNYWINLANQFKNNSNVWFNIANEPGDWNLDAQWKTMHKTVIEAIRGTGATNIIVVDGGTFGQDCGYSQAGNVVDGDSAVISWGQEVKSYDTTGNTIFSVHNYGCWDWSESKLTDYVNRVHAKNLALVFGEWGAQTGGEHQTAAQNTVNVSQAKKVGKMVWHWDGGDAFDLTNTGGGWGGDINRTDGTKPTNLTWLGSKVWDANRYTGSVAAKLSGTLYGTTPAFNGTDTFHKAMDGNTGTFFDYANSDGGYVGLDLGASVTKQITKVRLYPRSGMAYRMDGGKIQGSNTSSTSGFTDLGTVSSAQNAVWHEVTVTNTTKYRYVRYLSPSGSHCNVAELEFWGK
>NZ_CP011388.1|WP_068606190.1|2343486_2346711_+|efflux-RND-transporter-permease-subunit
MKGIIRFSLNNKFALWILTIIITVAGVYSGLTMKQETLPNLEIPILQVTTVYPGAAPDEIVNQLTIPLEQRIKNLNGVKTVTSMSMENVSSLTVEYDYNQDMDKAATEAREAMAGIQLPANVKAPEVSRISLNAFPVISLSLTDEKRSLEELTKLVEDEMKPALEGINGVASVEISGQHLKEVQLKFNQAKMQELGLSEDTVKGIVQGSALKAPLGLFEMEGTEKTVVVDGNIVSLDQLKNLAIPVIPGGAAQGAPGMGSPGGAAPGAPGMGAPGATAPGAAPTAGEAAAPGTAPATPALPGGNAAAAGIPTVQLQDIADIKLVGKAESISRTNGKESIGFQVVKAPDANTVDVVNAVKEEAEQLKQDNPGLTLTTMLDQGKPIEESVKTMLSKALFGALFAVVIILLFLRNFRTTIISIVSIPLSLLIGVLLLKQLDITLNMMSLGAMTVAIGRVVDDSIVVIENIYRRMSMSTEKLRGKELILDATREMFLPILSSTIVTIAVFLPLGLVSGLVGELFLPFALTMVFALLASLLVAITIVPMLGHSMFKKGVTGQKHEDKPGKLAEFYKSVLRWSLNHKLITVALAVLLLIGSFALVPMIGVSFIPEEEEKYAMVTYTPAPGEVIGEVEKSALAAEKYVLAQEQVTDVSYSVGGKNPLSPGPSKSALFYVMYDSEVDDFAKVKEDLVTGLQEQKTGKGEWKELDVSGAGVGGSNLALSVFGENLEDIKPVVNQIEKLAQENEAFEDVETSLSQTYEQYTLVADQEKLSSLGLTAGQIAMTLSPVRDRPVLTEINVDGKLYNVYIEVDPTKYNNIQDIENVKVTSPLGIQVPLKDVVTVKEGESPNTITRKDDRMYVEVSAKIVTADVAKASSDLQKKVEALDLPSNVDVQFGGVTEQINETFTQLGLAMLAAIAIVYLVLVITFGGALAPFAILFSLPFAIIGGLVGLLVTGETISVSVMMGALMLIGIVVTNAIVLLDRVIHKEREGYTTREALMEAAGTRLRPILMTALATIGALLPLALGFEGSGIISKGLGVTVIGGLLSSTLLTLIIVPVVYEFLMKFKKKQVEDRI
>NZ_CP011388.1|WP_068606191.1|2346746_2347640_+|TetR/AcrR-family-transcriptional-regulator
MSDKKIQIINAAMQCFAHKGFHATTIQEIADKAGIAKGSLYFYFESKEALLMSSFHYYHEQMVSSILVYVNDRSLSPREKLSLQVEERFRQVLSQRDFIAMLMNEQNMPINEELKAFIFMLKGEVLYRFHSGLADIYGEAGRPYALDGASLLNAMFHEYISCIIWDGKELDPRELTVFMMHRMDDVMNGMMARAGKPILTESLMADLLRAGKQVGDEDDVPLSVKEIAKLHEFLEKSDLAGKEKESLLSSMLLLENELRKPEPEVIIVRGMIAFLRGFKVNGFRKVLSSIEAMVVKE
>NZ_CP011388.1|WP_082882452.1|2347709_2349239_-|family-43-glycosylhydrolase
MKRKCIMRIRFMFTSLVVLSLIISLISGASASVGNTFNNPTVPMYSADPHVYKHTDGYYYYVQTEWKDIKIWRSSSLTKLTEGVNKVVFTSPQTGPNAQDYWAQEIHHINGKWYIYYTATCWNCGNNERRMFVMENSNPNPLQGSWVQKGKIADPNMDTFAIDGTVFSHNGILYYSWSGWENGGSTQKVFIARMSNPWTLDTGSTLLVSPDLWWEQEGYAIAEAPIFLKRNGKVFLVYSASFCGTENYRLGMLTASDNANLLSASSWTKSSNPIFEKSPANSVYGPGHNAFTVSPDGSEDWNIYHASPNPGQGGCGSGQYRDVRVQKVNWNSNGSPNLGVPASTSTALPVPSGEIGASPLIPNAGFEVDTKSANGANVQSPSHWLSYCSTHCDAEFSENYDGAHSGSYHGTHWKNTAYETYTYQVITDLPNGTYKASAWVRRGGNQASALFEAIQYGGTAKTVTLPVTNTWTKVEITNIQVTNGQVQLGFYSKANANDWIHFDDIELVK
>NZ_CP011388.1|WP_068606196.1|2349407_2350277_+|helix-turn-helix-domain-containing-protein
MADVGIIEYVDRFEDTQTGIADESFIARNIISNMIQHAHPHAELTFILGGSGMFVDPQGSSMNVKSGSVLFIPGLLRHGFTTSTGWRGISVHYHPERLDGYGRLLHKQLLQFQNQQIVTYKMNEPALSHICKLIELLNSEINLTGPHLEKSRALLLNLMLVHIHSVGKPESAARKPGSKGVQLEVAEVVAELERSFQDGINIDSIISNYGHSPSFFRKVFKESTGVSPKKYVMRLRLDHAKSLIRDTSVSITQAAYDSGFSSLTQFNTAFYKDVGMTPKAWRILNRVKP
>NZ_CP011388.1|WP_157279834.1|2350584_2350731_-|hypothetical-protein
MADTDYGRKIVLLIVVAVVVASFLSGDGEDEDDTLGEDATSTPIIFGR
>NZ_CP011388.1|WP_068606200.1|2350887_2351784_+|diacylglycerol-kinase-family-lipid-kinase
MYSRALLIYNGNAGQAETHRVLGAAVAILSPAIAELTLMPTQSQGDTERICRERGEDYELVIVLGGDGTVHECVNGLAPLEKPPIVGILPGGTCNDFARSLHVPLDIEQAAQAIVNGLMRPVDIGQAGERFFSNFYGIGLITDTSENINSGLKGMFGKLSYFVSTLQTLKAAKSFAYRLDMGDRVVDGEAVMVLVSNGRSIGTSALPTPLDALRDGLLDVFIIREAGIPLLIEVLSQKTSQNWDPEKSQIDYFQAPVIELTTNEPMRADTDGEIYTETPVRLSVVREKLRFITGLAQG
>NZ_CP011388.1|WP_068606202.1|2351896_2354380_-|hypothetical-protein
MKQGLKRAGMLLMALLLMLASVQLSPPRTATAANLITNNGFESGFTNWNNTNSSNITVGTSEFRSGSKSARIQGSASWGALQSASIAVTPNTNYAFTYYYKGGAGLRAVVCYDNGSWQEIQADNVTAASNWTQRTIQFNSGSHSSIFVILQDSGNVTGYFDDLNLDVDGAAAPNLLANPGFEMNLQNWASFGTPSVISVSSSEYRSGSKSLRMAGTGSWGSLQSNAIAVNANTNYTLTYYYKGGSGLRVAICYDDGGWKDIQADATLSAAGWTQRTVQFNTGARTSIFIVLQDSTGVTGHFDDLKLAPASGSGGDPGGGGSGGSNATSAVGTNLSEINSYDNHFPFVNMAFNSLGWFTNYPSWGQELSANQLTGTKYLPAGTNGYLAVFWDLKQAISGSYVVKWDGSATVSLDSNGSGSISVTSSAANRIAFNASNIRFLFLRVQNNSSSNPISNIRVTKAADENNTNLFAQSFIDDWKSFKYFRFMDWMTTNSNQSVAGPADYPDPGALINHPVSIDKMVALCNQTNADMWITIPVKASDALVDELAQYAATHLNSGLQVYVELGNEVWNMAGPFVWQQQYAAAEARRLSLSNTGNNWEDAPVWYAWRSEQIHDRFESKLGAARVQNVIAWQTEAWWVNKVLDYYNNYNEGGANAEMMATAPYFGGDLGLAKYESTVQNWTLNDLFQELRYGTKLAGDTELTYIDRSIAKAQEVKATIDNYPGVVYITYEGGQHLTEVNDDGSGENTAITSLFTSANRDARMGDLYTYYLDRWKAIGGRYFTNFSTVGPYSKYGSWAVKESETHTRAQSPKYDKLLSWIVNNPKWW
>NZ_CP011388.1|WP_068606203.1|2354678_2356151_+|helix-turn-helix-transcriptional-regulator
MIVNQYMLENSTEMRFNYENASFPVYIAPIDTAWNVKHVLHWHTNIELVYQVRGYNVIYTASGTLRLYEGQVAVLHPGELHCHSVEDANGYFYVISLDLRILITGEVEAPHNRFIQSLLEHRLRLHTLLTGEERWEQEVMAELRSMIELYTARPKEWEFLLASGMYRALSLFLNNGKTKPSKGRPIHKSEVKMRQLRQAIGYIHDHYDRELSIQDIAEFISMNPFQLIRLFRSCTGKTPIEYLHSCRVREAVRLLQTTDKKIMQVAMDTGFGNLSYFNAVFRKYTQCTPTVMRNSYRTLEPRTLPQGWVSADIGSGGAEGSASSMNQAYYVNGGGFDIGGERDAFHYCYTKWTGDFTVSCRIVCIVRTHIWAKAGIMIRDSLRDDGKFIHMYATPHSTLGLAWRPRAGADCEKLRTYHHVNCLDTPVFVKLERRGGRFTAAYSMDGVNWLPFPHASAELKLPDHVYIGFAVSSHDRQRVCSAKFDQMRMY
>NZ_CP011388.1|WP_068606204.1|2356231_2356756_+|hypothetical-protein
MPDRRQARLFIFPIMVSILLLLVVGCGTKEEPAMPETMPADFEFSVRYGITSKNAINTFEDKVTKDLVSDGTITVDLAFSETEMRSIYDRMRELNVLRDLKLESRIKNCFQTPFTEDYWKIQMNGETRIFHWSEENCSLTKDAAKLKELREFVHMIVSAQKVYTDLPKAKGGYH
>NZ_CP011388.1|WP_082882453.1|2356781_2357174_+|DUF2500-domain-containing-protein
MSDFNMDPGFFGAMGELPLFFKLFMGTVFILVVGGFLHVIVRGLWVWSKNNASDLVTTVATVRDKRIHVWGGSGESSANTEHYVTFEMDDQSRIELPVREDKYGLIVVGDRGELTHQGTRFKEFHRSIQS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011388_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_7

2802096-2802170

Orphan

Consensus_repeat	Method
TTCTAAGGAACTCCAGTAACGCTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011388_7

>merge|NZ_CP011388|7|2802096-2802170|CRISPRCasFinder
TTCTAAGGAACTCCAGTAACGCTAATGGCGGAAAATCAACACATTCTAGATTCTAAGGAACTCCAGTAGCGCTAA

>NZ_CP011388|7|7|2802096-2802170|CRISPRCasFinder
TTCTAAGGAACTCCAGTAACGCTAA	TGGCGGAAAATCAACACATTCTAGA
TTCTAAGGAACTCCAGTAGCGCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_068606931.1\|2813572_2814634_+\|aliphatic-sulfonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|130789
NZ_CP011388.1\|WP_068606926.1\|2810284_2812600_+\|arylsulfatase	unknown	unknown	gnl\|CDD\|293749
NZ_CP011388.1\|WP_068606900.1\|2790991_2791858_+\|transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|224224
NZ_CP011388.1\|WP_068606916.1\|2804004_2804886_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP011388.1\|WP_157279848.1\|2794106_2794376_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606904.1\|2794637_2796317_+\|potassium-transporting-ATPase-subunit-A	unknown	unknown	gnl\|CDD\|377138
NZ_CP011388.1\|WP_068606906.1\|2796335_2798381_+\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_CP011388.1\|WP_068606920.1\|2805745_2807566_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP011388.1\|WP_068606914.1\|2802513_2803914_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270452
NZ_CP011388.1\|WP_068606902.1\|2792559_2792916_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606910.1\|2799044_2801408_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225115
NZ_CP011388.1\|WP_157279847.1\|2792314_2792575_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606933.1\|2814633_2815509_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP011388.1\|WP_082882753.1\|2794526_2794604_+\|K(+)-transporting-ATPase-subunit-F	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606922.1\|2807965_2809594_+\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|224389
NZ_CP011388.1\|WP_068606912.1\|2801490_2802000_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378584
NZ_CP011388.1\|WP_068606918.1\|2804885_2805716_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP011388.1\|WP_157279849.1\|2809535_2809826_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606908.1\|2798407_2799010_+\|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl\|CDD\|376890
NZ_CP011388.1\|WP_068606929.1\|2812792_2813560_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213260

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_068606926.1\|2810284_2812600_+\|arylsulfatase	gnl\|CDD\|293749	cd16025, PAS_like, Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	0
NZ_CP011388.1\|WP_068606900.1\|2790991_2791858_+\|transglutaminase-family-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	1.21056e-45
NZ_CP011388.1\|WP_068606929.1\|2812792_2813560_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.74672e-120
NZ_CP011388.1\|WP_068606931.1\|2813572_2814634_+\|aliphatic-sulfonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|130789	TIGR01728, Putative_aliphatic_sulfonates-binding_protein, ABC transporter, substrate-binding protein, aliphatic sulfonates family. Members of this family are substrate-binding periplasmic proteins of ABC transporters. This subfamily includes SsuA, a member of a transporter operon needed to obtain sulfur from aliphatic sulfonates. Related proteins outside the scope of this model include taurine (NH2-CH2-CH2-S03H) binding proteins, the probable sulfate ester binding protein AtsR, and the probable aromatic sulfonate binding protein AsfC. All these families make sulfur available when Cys and sulfate levels are low. Please note that phylogenetic analysis by neighbor-joining suggests that a number of sequences belonging to this family have been excluded because of scoring lower than taurine-binding proteins. [Transport and binding proteins, Other].	2.18152e-71
NZ_CP011388.1\|WP_068606904.1\|2794637_2796317_+\|potassium-transporting-ATPase-subunit-A	gnl\|CDD\|377138	pfam03814, KdpA, Potassium-transporting ATPase A subunit.	0
NZ_CP011388.1\|WP_068606906.1\|2796335_2798381_+\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP011388.1\|WP_068606920.1\|2805745_2807566_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	6.10208e-50
NZ_CP011388.1\|WP_068606914.1\|2802513_2803914_+\|extracellular-solute-binding-protein	gnl\|CDD\|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.26462e-54
NZ_CP011388.1\|WP_068606910.1\|2799044_2801408_+\|histidine-kinase	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	3.84639e-143
NZ_CP011388.1\|WP_068606933.1\|2814633_2815509_+\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	3.6748e-85
NZ_CP011388.1\|WP_068606916.1\|2804004_2804886_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	5.70948e-77
NZ_CP011388.1\|WP_068606922.1\|2807965_2809594_+\|beta-N-acetylhexosaminidase	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	6.94668e-107
NZ_CP011388.1\|WP_068606912.1\|2801490_2802000_+\|hypothetical-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	7.84861e-14
NZ_CP011388.1\|WP_068606918.1\|2804885_2805716_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.64069e-62
NZ_CP011388.1\|WP_068606908.1\|2798407_2799010_+\|potassium-transporting-ATPase-subunit-KdpC	gnl\|CDD\|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	7.81846e-98

>NZ_CP011388.1|WP_068606912.1|2801490_2802000_+|hypothetical-protein
MKNHIVGVFESEAQAVEGIESLKRNGIHTDHISVIAKDGDVSASVEGQTGAEHVEHPKSGAVLGGVIGGGAGLFASVSTLAIPGIGPLLVGGALAATVAGAFIGSAAGGSAGNLTELGIREDEAKHYDADLRAGRILVIAEAADNQEARAVKALTDAKAVNAEALQAAL
>NZ_CP011388.1|WP_068606910.1|2799044_2801408_+|histidine-kinase
MGTEGFRRRTPEELLLSISKLHRGRLKIYIGAVSGSGKTYHMLREGCALRERGIDVVICAVSTRQREQTKLQLGSLERVPSIHWFNEQGEEKKDLNVDALIQRNPEVVLVDGLAHRNRAEAAYPTRLDDIKVLLEHGISVFTTVNVYELEGATELAMKLTGIQAEATVPSDTMDLADEVRLIDVSPETILQRLSDGSLGSRADKEQPMFRRGNLGKLRELSLRLVAEGVNESLEKYREEQGLLGPSGAAERILVSTQYHWNGSIYIRRGQQIAKRLNGDLRVVTFVNPKRELSKEAAAFKRSMMKLSEKVGAPFEELPLHAVRGLPRKLVSYAVEHNVSRLLLGHSKLTPWQEFWRGSVVSRILQYTQNVDIFIIADRAEQDGERILPTKSDPGGIADMEPYRRLNSEEVREKIGRMRRGKFKVYIGAAPGVGKTYTMLREGNDLLAKGIDAVIGLLETHNRQETADQEGALPVIPRSRNEYKGTVLEEMDTDAILKRNPEVVLVDELAHNNVPGSRYRKRYEDIMRILEAGISVISTVNVQHLESLNDAVEQITGVRVRETVPDSILQSADEIQLIDVAPDSLQQRMREGKIYAMNKVEQALGNFFKRGNLIALRELALREIADDVDERLESYERENSLRGPWRRREVIVVSVTTSLNAERLIRRGFRIAHRLKADWYVTYIHDLPELSEELSLRIRKMEDMTAKLGGKFKLCHTPHRRKRAMRLIALADENAATQIIVGQSKRTLWERWTRGSVVQGLLRHARHMDLLVVADYEPILQVEKGARP
>NZ_CP011388.1|WP_068606908.1|2798407_2799010_+|potassium-transporting-ATPase-subunit-KdpC
MDSNEQHQEFKGSSFVVALRTSLVFIVLCGILYPLVCTGIAQWVMPAQANGSLIKDASGKVVGSELIGQNFTDPKTFQGRVSSIENNGAGSGSNNYAPSNPDLLKRTQESINAWKIANPGVPVSQLPIALITNSGSGLDPHITPQSAEVQIPRISKLTGVPQEELLELVKKHTESRDLGVFGEPRVNVLKVNIDLKTMLK
>NZ_CP011388.1|WP_068606906.1|2796335_2798381_+|potassium-transporting-ATPase-subunit-KdpB
MNTNENRSRQSLLSSAIIGNAVKDSFIKLNPVTMMKNPVMFVVEVGTLVVLLMIMAPGYFGVDEGNIGFNITVFLILLFTLLFANFAEALAEGRGKAQADSLKKTKQEVMANKLAGGAVRRVPSTELRKGDIVVISQGELVPGDGEVIEGLASIDESAITGESAPVIKEAGGDFSSVTGGTRVVSDEIKVRITSDPGESFIDRMISLVEGAQRQKTPNEIALNTLLTSLTIIFLIVVVTLAPIAKYLNIELDVPVLIALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVLAMSGKAVEAAGDINTMILDKTGTITYGNRMASSFIPVGGATVADLADWAAISSMKDETPEGRSVLELMKKQGLTYNEGLGNGGEFIGFTAETRMSGVDLPDGRKVRKGAVDAVKRWVSGQGGSIPGELDIQGNKVATEGGTPLAVAVDNQIFGVIYLKDTVKPGMRERFDQMRAMGIKTIMCTGDNPLTAATIAREAGVDDFIAESTPEDKIAVIRREQAEGKLVAMTGDGTNDAPALAQADVGLAMNTGTVAAKEAANMVDLDSDPSKIIEVVAIGKQLLITRGALTTFSIANDIAKYFAIIPAMFMVAIPEMDVLNVMQLGSPLSAILSALIFNAVIIPLLIPLAMKGVAYKPMSAVQLLSRNIFIYGLGGVVAPFIGIKLIDLVVHLWI
>NZ_CP011388.1|WP_068606904.1|2794637_2796317_+|potassium-transporting-ATPase-subunit-A
MGILQIAIVIGIIMLLVKPVGTYLYHVFSNEPNRTDQVFGWAERIIYALIGLRNRAGMTWKKYALSFLITNIVLTAVSYLILRFQNGLPWNPNEIGNMEQTLTLNTVISFMTNTNLQHYSGESALTYFSQMVVITMMMFTSAATGFSVAIAFIRGLTKKGTTIGNFFEDFVKAHTRIFIPLAFIVTLVLVALKVPQTLDPTLAITTLEGAAQSIAIGPVAALESIKHLGTNGGGFFGVNSAHPFENPSPLTNVIEILSMWMLPAALPYTYGLFAKNRKQGWVVFSAMMALFLVFVSIAYTAELRGNPAINAIGIDASQGSMEGKEVRFGIPQSALFTTVTAAATTGTVNNMHDTLTPLGGLVPMAEMMLNSVFGGKGVGLINMLMYAILGVFIAGLMVGRTPEFLGRKIEPREMKLVAIAILSHAFIILVPTAAAFMSELGKAAITNPGFHGISQVLYEYTSSAANNGSGFEGLGDNTPFWNITTGIVMLLGRYISMIAMLAVAGSLVRKQWVPETVGTFRTDNVLFWGILIGSVVIIGALTFLPAVVLGPIAEHLTLR
>NZ_CP011388.1|WP_082882753.1|2794526_2794604_+|K(+)-transporting-ATPase-subunit-F
MTIILIFTVLIFVYLLYALVNPEKF
>NZ_CP011388.1|WP_157279848.1|2794106_2794376_+|hypothetical-protein
MNPEAGRGNTQLHKLLVGRLSRPNPTANLVSVPREATTIVFDTVCLAVPEAARRVPLPKASFLLPFFSGKYRGVENIVVVNTEEGIIVS
>NZ_CP011388.1|WP_068606902.1|2792559_2792916_-|hypothetical-protein
MAVNAPSFDIVKWAAFLQKLRNLTITEALNRVIEHAGMWGTVRTELVKMALLDVVARRQNMKWTEMIPIAVGGGMEGLYSANQATLGHMTGAVPFDAEHGVPVLHIQQRMLSILCWIR
>NZ_CP011388.1|WP_157279847.1|2792314_2792575_-|hypothetical-protein
MLDTVEQASRLRRQGYALSFHKDYLIGPGCTAMQVVSLSLEGAWLTEDAYPEPQPLCTTCESLYGTGFQLDTATLVEKSRAYFAVL
>NZ_CP011388.1|WP_068606900.1|2790991_2791858_+|transglutaminase-family-protein
MKLQIYHTTRYLYEEAVTDSVNELRLTPRTNERQSCYHHEVLVEPAASMLTYEDYFGNRVHAFTVNQPHKELVIRTRATVVTMDGLIKESAKMSPVEEWGRLRGEELQNRYIEYLLPTAYTDQTQEVRNYANRYPFDGSGGLALWTRRLSSGIHADFTYDPEVSDVHTTVSQTLQLRRGVCQDYAHLMISVCKVMGIPARYVSGYHYVGDLQGGSADFEQASHAWVEVYVPGPGWVGHDPTNDAEVDWRYVKLGHGRDYKDIVPVKGVYRGSGAQRLEVKVDVSRVEG
>NZ_CP011388.1|WP_068606914.1|2802513_2803914_+|extracellular-solute-binding-protein
MKKNLLMLLVLFLACSVVLAGCGNGNNGENAKNTNTANEPKAEEPKTEEPKAEEPAAVEPFTVSLRHIQIGDAQKNRKAILDDVVKKTEEEVPGLKFELDGVEDSVNRFTKLPAEMAAGNPPKIFDLFGGAGDALKFAKAGRLLDLTPIIEELGIKDKFLNLNQFTLDGKVYGLPIGGSSEGFYYNQAMFEKYGLKVPTTWAELETAAETLKKNNITPFASGSKAAWVPNMLVNTLIGRYAGPESIDGFAQGTAKWNSPEVVAAYAKYEEWVKKGYFTKGELGKEYADQMNEFVQGKAGMLFDGSWRSSVFKDEAQAFALTNKTGYFAMPAVDGGKGDQTFINGNYSNGYGFSADLKENELTAVKAFIKNLFNEEMQLRGLLEDGLLPSIQLSDAAMGQATDPIVKQVLDTYKNAKGAFSHFDSTIQSDVYKETEAELQKLIAGKTTAQKVGDAIQKAQDAANAKK
>NZ_CP011388.1|WP_068606916.1|2804004_2804886_+|sugar-ABC-transporter-permease
MKNTLRNPYVYLMFIVPTLVLYFLFFIYPMLQSVYYGFTDWNGLDEKNFVGFENFVTAFSDEVFRQSIWNNVIFILFSVFIQVPLIIFFAILISNVTKLQGLYKTTVFMPSILSTSVIGILWGFLYEPEEGIINGFLGLFGVPDIYWLAEEKWAMLAILITNAWQWMGFFIVLILAAILAVPREINEAAGIDGATAFQRAWYLTVPLIKPIISVVVMLSIAGAMKVVDIVLVMTDGGPINSTEVMASYMVHESISNGKYGYGTALSIIIFAFALVLTALYQLTIGRNQERIEY
>NZ_CP011388.1|WP_068606918.1|2804885_2805716_+|carbohydrate-ABC-transporter-permease
MPTALKKTLPHVVLLTYVALILIPFLFVLISSFKESNLEIVTNPFGLTGKLSVDNYVEAWTKAKINVYFFNSLYLSVSSSIVGVLLAAGTAFALTRMKFITASKWIYQFVLIGMLIPGNVLFIAQYMLVRDLNILNTHWSLFLPYTAGALPLSVLLVAAFMRAIPNELEEASIMDGLSAVGLFVKIILPLTVPALVTVFIINFLGNWNEYLLANFFISKDSLKTLPTGMVGFRDSYQTNYKLICTGIVYSVTPVLIVYAFLQEKIIEGITAGSVKG
>NZ_CP011388.1|WP_068606920.1|2805745_2807566_+|sensor-histidine-kinase
MRLRTKLFTAFFGLIILPIFLLGVTAYFFLSDLIEQKYSRQAELTLRALSQSVEFIFHEMNKVTDSTIASTAVQQVLDSRGYPSETDLTEIDYLALNDIQRNFRELLVNHPSVSYAFMYSLDGMRINKIYSKDRFNAMPFDVFKEQPLYREVLERNGLPKWVGPFESPQLTGLEPVFTQIRVVKDINTLDNKGILLTQIKNSGLQSLFRYFSFKQHVYQTRFFIVNERGLILFDSSDKAHGRQMNEFTEDSMDMGEGYQSGRVTFAGNDSILSSINFGDERWHLVSVASWSSLASEINQYSKWVAVIISFCLLSAFVFILFFVNRIAKHIIRIVRFMGRVESGEMNIRVPQSGKDELGLLSKGLNSLIERVQELLGRVKKEQEQKNKAEMRVLQAQIKPHFLFNTLESINALAVQNDGKKVSQMVLRLANILRISILGNEEITLKQEVDHLKSYLEIQQYRFAEVFDYIIDIPEELMSCTIQKLTLQPLVENCIQHGFDGLTRRGSIMIRAASSEGKLILTVEDNGIGISGEMLSRFQYMQADEEAAESSLTVNHMERRGLGVRSVADRIRIQYGDAYGLLICSSAGEGTIIQCKIPMYEYGEFRG
>NZ_CP011388.1|WP_068606922.1|2807965_2809594_+|beta-N-acetylhexosaminidase
MKVSALTLEEKVGQLFMVGFQGTKVTDEVRTMLEKYHVGGIIYFRRNVGELEEIAALSSDLQRIGGKELPLLIAIDQEGGMVSRIDREVTLIPGAMALGAARDADAVYETARISGRELRELGINMNFAPSVDVNNNPLNPVIGIRSYGEEPELVGELGAAASAGYQEAGVAATLKHFPGHGDTDVDSHLGLGLVPHDADRLEAVELLPFVRCMEAGVDAVMTAHVVFPAYEPNGVPATLSHSVITELLRNKLGYDGVIVTDCLEMHAISKEYGIPQGAVMAVEAGADLVLVSHTFAEQAAAVEAVTAAVRAGRISEARIDASVGRVLALKAKRGMASGAAAGSAARGAIGAPADWDVVRRVSERSITLVKDEGQLPLSAGERTLVVWAEPRESTEVIEIIEQDVTLGTALSAYVADVREMRIGLDPASSEIDAVLAAAEGCAQVVVATHNPVARLGAGQVRLVEALAAREGVKLVVASTRNPYDLMEFPQVKTYLCAYENRPMAMQSLAKVLVGRIPAQGRLPVTLSEAYPFGWPTAQAATT
>NZ_CP011388.1|WP_157279849.1|2809535_2809826_-|hypothetical-protein
MINVLRVPRRVTRFLHDGLRVKTIPVAHTGYGTAGCELQPLRIRALRVVNCTIAGYSHCGLRVATIASYSHYGLPVEVTSLPLEPSAIRTGKLPTT
>NZ_CP011388.1|WP_068606926.1|2810284_2812600_+|arylsulfatase
MSKQQPRRGKSNPANTQQFQGVIGRTVEDSVADWSGISRAEKDSPNVVFIVLDDTGFAHLGCYGSTITTSNLDDLAAKGLRYTNFHTNSMCSPTRASLLTGRNSHTAGVSMITEFQNGFPNARGKISKQTGTLAEILKEQGYNTIAVGKWHLVPGEEQTFAGPFDGWPTGKGFEHYYGFLKGETDQYNPELVSYHTTVKPGKSAAEGYHLTEDLTDRAIDFVRNQKAAAPHNPFFLYLAYGATHAPHQAPKAYIDKYKGKFNQGWDAIREEWFSRQKSQGVIPQNTELPARNPLVKPWSELGEEEKTLFARAQEVFAGYLEHTDDQIGRLTAYLKEIDQFDNTIIVLISDNGASPEGGQNGTLNEYKHFNGLPSDPREDIKRIDELGTETVYNHYPLGWAHAGNTPLKWYKTWVHAGGVKDPLIISYPNGIRDGGGVRNQYHHVTDIVPTVLELLNLEAPASLGGVTQKPIQGVSLAYSFDNPTAKSRKQTQYYEMLGHRAIWHDGWKAVTNHVPGSSFESDRWELYHEAEDYSESRDLSALYPDKLRELIERWWAEAGKYEVLPIDGRTMMERAFDSNLNRPLSPQAQEDGKGNITFRFKPSNLQLHAMQAPFVSNRAHRITAEVERADPDERGVLVADGNRFGGYALFVQDNRLVYHYNWLGEAHYTITSEAILPLGSVTVEAEFTPTGAHEGTITLYVQGAAAGQGEIRTAQLKGPGVFAVGTNVLSPVSPAYSGEFPYSGVLKEVRIQYRVQHTDAAELLELELASE
>NZ_CP011388.1|WP_068606929.1|2812792_2813560_+|ABC-transporter-ATP-binding-protein
MSPLLEIRHLHKTFHGQGSSTPALRNIDLSVKEKEFVSIIGPSGCGKSTLLKIAAGLDTEFEGTLLLDGAKVEKPSKNQGFIFQEHRLFPWLTVEKNIAADLSLSDPNIKDKVQDAIRLVKLEGFEKAFPKQLSGGMSQRVAIARALIRKPKVLLLDEPFGALDAFTRQHMQEVLLDIWETNRTTMLFVTHDIDEAVFLSNRVVVMGARPGTIKRILPVDLPYPRKRTGTSFQQLRQEVLETFEHNDELKDEFVI
>NZ_CP011388.1|WP_068606931.1|2813572_2814634_+|aliphatic-sulfonate-ABC-transporter-substrate-binding-protein
MSHATNVKKRLVQGKLTAILILLFASIATGCGNGEEKAAATASTDSNAASGAKEKFTVNIGINSGIGVLALAKEKGFFKEAYAEINADVTFADFPTGPPLVEAVAAERIDLGYLGDAAAIGALTGNIPITLLSQVSDGKQGLNHLLVHKDSPIQKVEDLKGKKIALTKGTVFHVFLVKALNQVGLKETDVEIIHLQPDEGQPAFESKAVDAWIISNPYVGLQVQKNGAQIIADGESLDLPAPIFSFVRNEFAEKHPEAVEIFLKVFNETLEYERNHKDEALELYAKLKKVDKQVIASVLKTSPSVNTPISPEVVQFEQNTADLLYDLKFLKKKIEIAKFINNDYVQKVNGGNP
>NZ_CP011388.1|WP_068606933.1|2814633_2815509_+|ABC-transporter-permease
MAIPSDKLTPPVISPAAKPVPARQPSGRTNQGSSHRSNRKWAVALKGLLLPLTLLLLWQTASSRGWLSPTMLPSPILIAKEFWQLIITGELWLHLRVSVVRAALGFLLGGSLGLAFGLAVGLFRRAEHVFDPSIQMLRTIPHLAITPLFILWFGFGELSKVLLISLGAFFPLYVNTFLGVRSVDSKLFDVAKVLEFNRWKQLTKLVLPAALPNVLLGLRLSIGIAWLGLVVAELMGSSEGIGYMITDARQFSRTAVVFVGIMLFAVVGKLADSFVRLLENRLLRWRDSYKG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011388_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_8

2838852-2839043

Orphan

Consensus_repeat	Method
CACAAGATATCCCCACGACTCAGC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP011388_8

>merge|NZ_CP011388|8|2838852-2839043|PILER-CR
CACACGATATCCCCACGACTCAGCCTATGATGCCGAGTTGCGTTGCGTCCCTGAGCCAGCATGTTGTCTTAATTTAACTCAAATCGGCCATATCCCCACGACTCAGCTCACAGATCTGCCCCCACACGTTGCCCGCGAGCAACTCGCACGCTGTCTTAGTCCGCGGTACACAAGCTATCCCCACCACTCAGC

>NZ_CP011388|8|1|2838852-2839043|PILER-CR
CACACGATATCCCCACGACTCAGC	CTATGATGCCGAGTTGCGTTGCGTCCCTGAGCCAGCATGTTGTCTTAATTTAACTCAAATCGGCC
ATATCCCCACGACTCAGCTCACAG	ATCTGCCCCCACACGTTGCCCGCGAGCAACTCGCACGCTGTCTTAGTCCGCGGTACACAAG
CTATCCCCACCACTCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_082882499.1\|2835612_2837736_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|236720
NZ_CP011388.1\|WP_082882500.1\|2839136_2840597_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP011388.1\|WP_068606952.1\|2841116_2842550_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|223903
NZ_CP011388.1\|WP_082882501.1\|2844802_2846227_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP011388.1\|WP_157279850.1\|2818838_2831120_+\|tandem-95-repeat-protein	unknown	unknown	gnl\|CDD\|333740
NZ_CP011388.1\|WP_068606941.1\|2831324_2832506_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP011388.1\|WP_082882498.1\|2815546_2816518_+\|taurine-dioxygenase	unknown	unknown	gnl\|CDD\|181947
NZ_CP011388.1\|WP_068606943.1\|2832542_2833325_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274875
NZ_CP011388.1\|WP_068606945.1\|2833590_2834448_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP011388.1\|WP_157279851.1\|2837845_2838511_+\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	unknown	unknown	gnl\|CDD\|223871
NZ_CP011388.1\|WP_068606965.1\|2847999_2848203_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068606969.1\|2848727_2849273_+\|DUF1700-domain-containing-protein	unknown	unknown	gnl\|CDD\|285278
NZ_CP011388.1\|WP_068606937.1\|2817623_2818586_-\|formylglycine-generating-enzyme-family-protein	unknown	unknown	gnl\|CDD\|335469
NZ_CP011388.1\|WP_082882756.1\|2846414_2847125_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270620
NZ_CP011388.1\|WP_068611076.1\|2834608_2835613_+\|iron-siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238566
NZ_CP011388.1\|WP_068606967.1\|2848405_2848735_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP011388.1\|WP_068606963.1\|2847181_2848003_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011388.1\|WP_068606935.1\|2816593_2817541_-\|UV-DNA-damage-repair-endonuclease-UvsE	unknown	unknown	gnl\|CDD\|235029
NZ_CP011388.1\|WP_068606954.1\|2842688_2843267_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|181835
NZ_CP011388.1\|WP_068606956.1\|2843253_2844843_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_082882499.1\|2835612_2837736_+\|iron-ABC-transporter-permease	gnl\|CDD\|236720	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB.	7.42127e-178
NZ_CP011388.1\|WP_082882500.1\|2839136_2840597_-\|hypothetical-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	9.48423e-44
NZ_CP011388.1\|WP_068606952.1\|2841116_2842550_+\|amino-acid-permease	gnl\|CDD\|223903	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism].	0
NZ_CP011388.1\|WP_082882501.1\|2844802_2846227_+\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.92691e-35
NZ_CP011388.1\|WP_157279850.1\|2818838_2831120_+\|tandem-95-repeat-protein	gnl\|CDD\|333740	NF012211, tand_rpt_95, tandem-95 repeat protein. This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.	9.23517e-19
NZ_CP011388.1\|WP_068606941.1\|2831324_2832506_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.34218e-24
NZ_CP011388.1\|WP_082882498.1\|2815546_2816518_+\|taurine-dioxygenase	gnl\|CDD\|181947	PRK09553, tauD, taurine dioxygenase; Reviewed.	1.56233e-94
NZ_CP011388.1\|WP_068606943.1\|2832542_2833325_-\|hypothetical-protein	gnl\|CDD\|274875	TIGR03951, Fe_III_red_FhuF, siderophore-iron reductase FhuF. Members of this protein family, including FhuF of E. coli, are siderophore ferric iron reductases that appear to play a role in iron removal from certain hydroxamate-type siderophores, including coprogen, ferrichrome, ferrioxamine B, and aerobactin. Genes occur in regularly in siderophore transport and/or biosynthesis clusters. The C-terminus includes four Cys residues in a C-C-10(X)-C-X-X-C motif that binds a 2Fe-2S cluster. Family TIGR03950 is similar, but especially in the C-terminal region, but likely acts on a different panel of siderophores. [Energy metabolism, Electron transport, Transport and binding proteins, Cations and iron carrying compounds].	1.89288e-05
NZ_CP011388.1\|WP_068606945.1\|2833590_2834448_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.85855e-135
NZ_CP011388.1\|WP_157279851.1\|2837845_2838511_+\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	gnl\|CDD\|223871	COG0800, Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism].	1.88984e-68
NZ_CP011388.1\|WP_068606969.1\|2848727_2849273_+\|DUF1700-domain-containing-protein	gnl\|CDD\|285278	pfam08006, DUF1700, Protein of unknown function (DUF1700). This family contains many hypothetical bacterial proteins and putative membrane proteins.	1.73555e-55
NZ_CP011388.1\|WP_068606937.1\|2817623_2818586_-\|formylglycine-generating-enzyme-family-protein	gnl\|CDD\|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	4.28731e-81
NZ_CP011388.1\|WP_082882756.1\|2846414_2847125_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|270620	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues. This family contains the 3D domain, named for its 3 conserved aspartates, including similar uncharacterized proteins. These proteins contain the critical active site aspartate of mltA-like lytic transglycosylases where the 3D domain forms a larger domain with the N-terminal region. This domain is also found in conjunction with numerous other domains such as the Escherichia coli MltA, a membrane-bound lytic transglycosylase comprised of 2 domains separated by a large groove, where the peptidoglycan strand binds. Domain A is made up of an N-terminal and a C-terminal portion, corresponding to the 3D domain and Domain B is inserted within the linear sequence of domain A. MltA is distinct from other bacterial LTs, which are similar to each other. Escherichia coli peptidoglycan lytic transglycosylase (LT) initiates cell wall recycling in response to damage, during bacterial fission, and cleaves peptidoglycan (PG) to create functional spaces in its wall. PG chains (also known as murein), the major components of the bacterial cell wall, are comprised of alternating beta-1-4-linked N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), and lytic transglycosylases cleave this beta-1-4 bond.	2.65132e-34
NZ_CP011388.1\|WP_068611076.1\|2834608_2835613_+\|iron-siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238566	cd01146, FhuD, Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.	1.50439e-83
NZ_CP011388.1\|WP_068606967.1\|2848405_2848735_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	5.5879e-26
NZ_CP011388.1\|WP_068606963.1\|2847181_2848003_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.76246e-27
NZ_CP011388.1\|WP_068606935.1\|2816593_2817541_-\|UV-DNA-damage-repair-endonuclease-UvsE	gnl\|CDD\|235029	PRK02308, uvsE, putative UV damage endonuclease; Provisional.	6.41246e-122
NZ_CP011388.1\|WP_068606954.1\|2842688_2843267_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|181835	PRK09415, PRK09415, RNA polymerase factor sigma C; Reviewed.	3.94336e-42
NZ_CP011388.1\|WP_068606956.1\|2843253_2844843_+\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.70106e-31

>NZ_CP011388.1|WP_157279851.1|2837845_2838511_+|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase
MNSMKTTDCFELVQKSKLIAILRGVEDSKADQVVDALERGGITIIEATMNTEGATGMISRWRERYEGRLLIGAGTVLDVEMAREAIDAGSQFLISPNFDPEVVAYATKRGIDVYPGVMTPTEIVAAWKSGVKAVKVFPSGSLGLNYIKEIRAPLDRIPMIATGGVNLQNIGDFLAAGVCAIGLGGSLASKQVVSEGRFDEIEKTARAFVNAVESFTAASVK
>NZ_CP011388.1|WP_082882499.1|2835612_2837736_+|iron-ABC-transporter-permease
MGELKRGKVLRLAEKPVIPLNQPAEQQGLTGRRGLSGRVARGLLVFGGGLLLLAALLFASLTQGEADITLQTVTDAIVAPTDDPDQVLIRGIRLPRAVMAMLAGAALAAAGVLLQTVTRNPLASAGTFGINAGAYFAVVAATVFMPAAISRMPLLMALIGGAGAAIMAYFMAGGVKATPVRMALAGMIVALVLSSFTSAIQLLFEESTNGLFLWGSGSVVQNDWHGVLYSLPWIAGGLLVILLFARRLDVLGLGDETARALGQQVGFTRFAALAIAILLASVTVSVVGPIGFIGLMAPHLMRLTGYRRHLSLLLSSALWGAIILVGADTVARLFASVIGELPAGAVTALIGGPWLVWLAVRGTQAVRTTEATSSMSVGVAARKLPFALLASGLTALLAAVCLAALSIGSLRIAPGEVLAALAGGGEELTRNILFDMRLPRLLVAAVAGAGLAVSGVLLQATVRNPLADPSVVGVTSGAGVGALLLMLLWPAAPPWLLPATAFVGAVAAGAIVYGLAWRRGMSPTVLTLVGIAVTAVGSAIIQFLVIRSGMGAAPALAWLAGSIYARGWSDLALLAMPFAVLIPYAWRLGRSADLLAFGDHTALGLGLRLTRTRLIAALTGVALAAAVVATVGTVGFIGLLAPHMARMLAGHHQRRLTVLSALLGAVLLVSADLIGRVVIAPKEVPAGLVVALVGTPYLLALMVRSAK
>NZ_CP011388.1|WP_068611076.1|2834608_2835613_+|iron-siderophore-ABC-transporter-substrate-binding-protein
MVMLSVMLGLTACGGNTANTANTSGTTNESNAGNANTGNAQVSEEVKRIKHPLGTTEIKGIPQRIVVLEWSYVEDLLALGVKPVGVADIENYKVWVNVKSGELAEATDVGTRQEPNLETIMSLKPDLIITDDFRVAQSYDKLSEIAPTLVFAPYSEEAAKDQYADMENAFRTLADIVGKTAEAEQVLDDVQKTYDEAKTKLEAAGKAGQEIVLSQAWSNQNAAAMRLFTDNSYAVKIMEKIGLKNGWKSDKLESYGFSDATVESLTKVKQANFLYVVQDDDNVFETKLKDNAVWKGLDFVKENRAYALGGDTWLFGGPLTAQLLAERAVNLLTK
>NZ_CP011388.1|WP_068606945.1|2833590_2834448_+|ABC-transporter-ATP-binding-protein
MNRLFAKQLHIGYGDKTIVRDLDLSIPEGKITALVGANGSGKSTLLKAMARLLKPQQGGVYLDGKSIFTMPTKEVAKQIAILPQHPVAPEGLTVKELISYGRFPHQSGFGSLTKQDLEIVQWAIQVTGLTEFAERPIEQMSGGQRQRAWIAMSLAQGTDMLFLDEPTTFLDMAHQLEVLQLLEKLNQEEGRTIVMVVHDLNHASQFADHLVAIKSGEIVCEGHPQEIVNQEMLRNVFGVEADIVQDPRTGMPLCIPYGLAGGATRMKAKPQQINVERKAAAAVSV
>NZ_CP011388.1|WP_068606943.1|2832542_2833325_-|hypothetical-protein
MIATEMDFSLTEKYFNLTSNDVGGALIACPAEELLHGVRMDELLRIGKEQLSAFGLDLPASFLGLAVYGLCGSTQIHMAQSQVIPDLSLGNLTFHIKVDNGYPTVLFRMNSVRGEALPEEPEARERAVIRAFEKLTEQTLRPLAEAIAWRAGVKPSLIWNQFGSRAAFLKDYMPGHDSRCFVMEAFNRDDAALKTISAEWFGLRRNPFDFEPEYFDHPSHPDKPVMVRSGCCFYYRKEGGVKCYSCPALTEADRAKLLSS
>NZ_CP011388.1|WP_068606941.1|2831324_2832506_+|MFS-transporter
MDYSANVWKLYAMRFFSSLIPAYVIERLYWEERGMTIQMVIYAELIYALTIVLLEVPTGILADRFGRTRMLVLSALLGCAEFAILIYATAFWHFAAVVFLAGISRSASSGSENALLYDTLKVQGKAASFERQLGFLNALDLTAAILAALCGSLLAGRFGLELNYWISLGSAAVAWVLSMTLKELAPIQSEAESEEAIPFREYVRVSLRFFRKNPNVLLVMFTGMITGAAMGYIEEFWQLYVDRLGFQVFYFGMISGSVMLLQLPGNILAHWLIQKLGYRKLLFILLAVFTIGFAYVATCRDVAGLTAMLIICACSGVMEPLASGYLHHRIDSSKRATMDSFQSLGENVMSIVAGLGFGYYATKYDVFGGYGFVAFLCLGCWMWFIAASRRLER
>NZ_CP011388.1|WP_157279850.1|2818838_2831120_+|tandem-95-repeat-protein
MRADVGLSQVGKVSYPVIKKEMRLYGMPFITRYNTTTNGAITFTGNSLGLSKLNNANAPGTAHSIGTFITVDTSLRDNTYPLGTTASYLLNSSAAQLRLPVQSVVLYAELIWGGSYSFGGENVAAALNNAVKLTNNAGTFNITPEAATATTFTSRAYYIRSANVTSFVQQGGGGTYIVGGVPGTQGNAENAGNACGWTLAVVYQNASLPSRNMTVFVGSELVDNPTSTAAASVSGFSTPTSGPLSGRLLVSAVEGDSAITGDQMQFGPTVASLSAVFGPNNVIDNFFSSQINGDTGLLDTSGTFGTLNHPLGGAASGARQGWDITNIDVSSKLVNSQTSAFLRGTTTGDVYIINGLALQVNINAPVLAVTKSVNRTTAFLNEIITFTVQITNTGNATATNLNLKDNDTPGTTFIANSVTVNGTTQPGVDPYIGMSLGSIANGQRITVTYQSQVTNQAFNPPRYDNQVIITYQFQSVTGGTLFNGTVSSNTASVAAGNNPPVTSDVTGTIAEDTLFSSQITATDPEGAPLIYTLGAPPSNGTVTLNGNGSFIYTPRLNYHGTDSFSVTVSDGRGGSAVSRVIITVTPVNDPPVVSDVNDSTSEDTPTMNQIVATDVDGDPLTYSLNTPPSNGTAVVTPGGGYTYIPDLNFNGVDSFTVLVSDGNGGSAVATVTVTVTPVNDPPVAADAEYTIAEDTTLSGTITGTDVDGDVLTMSLQNSPVHGTVVVNADGTFLYTPFADYNGQDQFTVLVSDGQGGTDSATVTITVTPVNDPPAALDVSDTTAEDIPSVNRVIATDVDGDTLTFLLGDPPSNGTVVVNSDGTYTYTPNPDYNGTDQFTVVVSDGNGGTDTATVTIAVTPVNDYPVTADVFLTTPEDTQVSGQVPGTDVDGDVLTYSLETSPTNGVVTVNADGAFTYTPQQDFNGFDSFTVRVNDGQGGTAESNVAITVTPVNDAPVAQDVTETLPEDTTTSGKINALDVDGDTLTFSLLSGAANGLAVVNPDGTYTYTPNADYNGPDSFSVLVDDGNGGTDTATVSITVTPVNDPPVTSDVTLTTPEDVPVTGLVTAADVDGDALIVVVFTGPTHGTVLLNGDGTFTYTPFADYNGIDSFTVQFSDGNGGTAQANVFITVTPVNDPPVAMDLTDTTAEDVPSENRVTATDVDGDALTFTLTVPAENGTVTLNPDGSYIYTPDPNFNGVDTFTVTVDDGNGGTDTAVVTINVTPVNDPPVVSDVNLTTPEDTAVDGQVIATDVDGDPLTALLLTVPGHGTAVVSLDGAFTYTPNQDYNGTDTFTVQISDGQGGTAEASIFITVTPVNDAPVAIDVFDTTSEDLPSTNRIQATDVDGDVLTYTISTAPTNGTVTVNPDGTYTYTPNPDYNGTDVFTVLVDDGNGGTDTATVTIVVSPVNDPPAAADVTLTTPEDTAVGGQITATDVDGDSLAYRVLTPPSRGAVALETDGTFLYTPFADLNGTDTFTVEISDGQGGTAEAGVTIIVTPVNDPPVAADISDTTAEDIPSTGKVSATDADGDIVIFSLNTPPANGTAVVNPDGTYTYTPAPDFNGTDSFTVLADDGNGGTDTATVTIQVTPVNDPPVTADITVTLPEDTVAAGQVTATDVDGDSLTFALNTPPSYGVVNVAVDGTFTYTPNADFHGQDSFTVRVSDGNGGTAEANVTLLITLVNDPPVAMDVADTTSEDTVSNGQVTATDVDGDPLTYVLATGPANGTVIVQADGSYTYTPALNFNGVDSFTVEVSDGNGGTDLAVVTVTVVPVNDPPTAPDQALTTPEDTPLSGSIGATDVDGDALTYVIVSPAEHGTFTLNADGTFQYVPNPDFNGIDTVMIQVSDGNGGTAESDIVITVTPVNDAPVAEDISFAVRQDSSTISQVTATDVDGDTLTYALLIAPVNGTAVVAADGSLVYTPAPGFTGSDSFTVIASDGNGGTDTATVSVFVYPTINDDLAQDVSLTTDEDTPVSGTVPATPPVGNTLVFGLFSPPVHGNAAVNPDGTFTYTPNDNYHGVDSFAVLVSSDPDGQSDISVISITVAAVNDAPVAEDASLTIAEDKLITQKLNALDVDGDVLKYSLATEPVNGTASVDADGNYTYTPNPNFNGTDVFTILVEDPGGLSDTATINVTILPVNDAPVTTNVSLTSPEGTLATGQIEADDVDGDPLTFSLNTSPSYGSAAVNLDGTFTYSPNAFFHGTDSFTVLVSDGRGGTALSNVTVTVTPVNDPPVALDVSDFTSEDVPSNGQVTATDVDGDALTFSLNTPPANGSAVVNPDGSYTYTPAPDFNGTDSFTVLVDDGNGGTDIAVVTVQITPVNDPPVASDLSLATTEDTAVGGQVTATDVDGDTLVFQLLTEPSRGVVSMNPDGTFTYTPDLDFNGPDTFTVQVTDGNGGTDEASVFITVTPVNDAPVALDLEDTTAEDIPSIGQLSASDVDGDALVYSLNTPPTRGTAVVNPDGAYTYTPDANFNGTDSFTFLVSDGNGGNDTGTVTIAVTPVNDPPVASDVSLITLEDTPVNGQVTATDVDGDVLVYDIFTPASNGTVLMNPDGSFTYTPNLNFNGVDTFTVQVSDGNGGTNEASVSVTITPVNDPPAAYDVSDTTSEDVSTSGSVSALDPDRDVITFTLITPPANGTAAVSPDGSYTYTPNPDYNGTDSFVVQADDGNGGTDTATVTIEITPVNDPPVAEDVNVTTAEDTPVSGQVTATDVDGDTITFQLFTPPSQGTVILNLDGTFTYTPNPNYNGPDTFTVQASDGNGGTDEASVIITVTPVNDAPVAFDLVNTTSEDVPSSGRLAATDVDGDPLTFSLVTPPVNGTVVVEPDGNYTYTPNPDYNGTDAFTIRVEDGNGGSDEAVITMVITPVNDAPVAPDLNITTLEDTPVGGQVAATDVDGDVLIYVLTSLPTNGAVTLNAVDGSFTYTPNQDFNGTDSFAVTVDDGNGGTDEANVSIVITPVNDPPTAFSVSDQTSEDRPSYGQVIAFDVDGDPLTFSLSAPPTNGTAVVNPDGSYIYTPNPNFNGLDVFPVLVDDGNGGSTIVTVTVQVNVTPVNDPPVITDITLTLAEDTAVTGQAAATDVDGDSLTYALFTSPSNGVAVVNSDGTFTYTPNQDFNGPDTFTILVSDGNGGTAAGSVFLTITPVNDPPVLADAFEQISEDTVFTSRLQGMDVDGDSLTYSLSAPPLNGNAIVETDGSYVYTPNVNYNGTDTFEVRVDDGNGAFDTAVVTITILPVNDPPLTADMFITTAEDTPVTGQVSASDVDGDSLTFTLWTPPSNGTVNLNANGELTYFPFTDFNGMDSFTVQVDDGNGGTAISGVYITVTPVNDAPVGIDVFDTTDEDVPSDGLITATDVDGDPLTFALDAGPVNGTVTVAPDGSYRYVPNPDYHGTDVFTVTVSDGQGGEDKVTVTIEVRPVNDSPIAEDLVLTTDEDTPVTASVTASDVDGDALVFSLNTEPANGTVAIRADGTFTYTPNPDYNGPDGFTVFVTDGNGGSDVANIILTVTPVNDPPNVVSESLSTLTNLPFDDRIKAEDPDSSALTYLLSATPVNGTVDLRGDGTYTYTPDLNFSGLDSFQVTVSDEDGGSSVSTVEINIVPLVTALEAMLYTLVNTPVSSSFPVNLEVIVASVLSVQPANGTATVFADGTFTYVPNPDFIGNDFFTISVNGIPAFIQVNVIPNNQPPIFNDIAIITSRNRSVQEQIVAFDLEGSPVTYALTTPPSHGTAQVGIDGILIYTPNRDFTGTDFLTVAAADAEGAVTYKTLYVTVEFSNVAPNVPDLFVSASENGSASGMLSAYDEDGDVLIYQIFGGPANGIVTLRDDGTFIYQANQGFNGTDTFIVSVRDAFGGEDTAIVTVIVGGMQSPPEVSPVNAGLSQGGTITGRLPGYDPEGGQIRFTLLRRPANGTAIIGDGIYTYTPDSNFIGRDSFIVRATSSVTGLSSDIVITIEVYAGAEPGKRPPLDRVPDEARPGNTARENQGENPEDRQSENQGLTRRESNLVFDADNEMILTRDYDVFTAENQPVSGIAIARSTTGRRLRYFLGIRPDHGRADVSPDGSWMYTPDSRYVGKDEFVIRVTDGERFNVSRIRIVIEPTSEE
>NZ_CP011388.1|WP_068606937.1|2817623_2818586_-|formylglycine-generating-enzyme-family-protein
MSEFEKKSSCCSGSRTGVIHTRTSANPDVRGRTPLQVNTLLDPLAQTVQPTYAEQMIRLPGGTFLMGTNDAEGFPADGEGPIREVTVAAFEIDPYAVTNAAFSEFIRATGYVTEAERYGWSFVFHALVSPEQSRKVNNCVQEAPWWWVVEGASWQHPEGPDSGIADRWNHPVVHVTWHDAEAYSAWAGKRLPTEAEWEYAARGGLSQKRYPWGDELHPEGAHRCNIWQGQFPVNNEGSDGYIGTAPVDTYAPNGYGLYNMVGNVWEMCSDFFSLEHNRKAMRGGSYLCHHSYCNRYRVAARSSNTPDSSSGNIGFRCVRS
>NZ_CP011388.1|WP_068606935.1|2816593_2817541_-|UV-DNA-damage-repair-endonuclease-UvsE
MIVRLGFVSIALGIFNNTASSTFTYKLFSQRSREDALKRAIEVGHNNLRATQRILYFNAAHGVKTFRLSSQLVPLATHPDVMLDVGRIYKKELKQLGAYARKEGIRLTMHPNQFTLLNGSDAVVAAAIHDLEYHAAILDGMGMDESGVINIHIGGVYGDKSSAVERLYANWELVPEHVKRRLTFENDDKTYTLEETLAVCERIRRPLVLDLHHDWCNPSEITAISIINRIQSTWGDIPMKIHVSSPKSEKEFRAHADYVDPEPLSQFLKACKEAGLEQIDVVVEAKMKDFAVFKLAEDLGKIRGVKRLDGAVLEW
>NZ_CP011388.1|WP_082882498.1|2815546_2816518_+|taurine-dioxygenase
MSEALASSSNSKARTKEAPNVPVVENIELPRWGLHQGPIPLRRLSEGASEAPYTLFKLKPLGPIIGAEIEGVLLDGEITPSLQAELHRALLEWKVLFFRNQVITSQEHAAFAKLWGPLESHPFLPRGDSEEVTRFAKDANTAGYENNWHTDVTWRLEPALGSVLRLTEVPEYGGDTLWADMAAAYDNLPDVIKEKIDGLTAIHDFTHVFGRNLPPDLLAAKQEEFPPAEHPVVRTHPETGRKTLFVNAAFTTRIVGLEPDESRSLLLYLFRQASLPEYQVRFRWEANSVAFWDNRATQHYAVSDYFPQRRVAERISIAGDRPY
>NZ_CP011388.1|WP_082882500.1|2839136_2840597_-|hypothetical-protein
MFGMDATQLQLRNQLMIKLLWGALALGILANLTAKVTLIALLGFTVPFTALFTVFVWKRIMSKWIMYFIAAELLVITAILNFSSSGGYTSYFMMYFSLALIALYHNFRPILLTAAGAVVMTNLLPLFIADFQNIDIVSTNLLLVLTAVALITQSRIGETMMKDVQTNHIETLANKEKVDTILAQLKENVNTLVIYSNGLQQNAKAAGQITGEFTMAFNEIARGIESQTSSVSDVSDALSTIDHSIVIVTDNSQSMKQLSVETADLTRGGTEQSNNMATEIQKIESIINMNVDVMEQLYNQSNSIGSILSSIREITNQTNLLSLNAAIEAARAGEHGRGFAVVSGEIQKLANNAQQATNEIGTILGDIQKLTAHATEQIRIGQTAAQSGTREVSKTVELFSAISENTENLSEKSTIVDEMNMKLKVSSENIVNVITTVSSVTQETAASVEQLLASAEEQNMRVTAIIDDIEGLGRLTKELEALASRA
>NZ_CP011388.1|WP_068606952.1|2841116_2842550_+|amino-acid-permease
MEQQQQLRRGLKARHMMMISLGGSIGTGLFLASGGAISTAGPGGALLAYLLIGIMVYFLMTSLGEMATYLPVPGSFSTYATRFVDPSFGFAIGWNYWYNWAITIAAELSAATLIMKYWFPDSSSLLWSGLFLAIMLAFNLLSVRGFGESEYWFAMIKIATVIIFIVIGILMIVGIWNGEARGFSQFTAGDAPFPGGFLTILGVFMAAGFSFQGTELLGIAAGESEDPRRNVPRAIRSVFWRILLFYVLAIAVIGLLIPFNDPNIANSDISQSPFTVIFEKAGLSIAASVMNAVILTSVLSAGNSGMYASARMIWVLAKEGKAPKFLAKLDSRGIPVAAVLVTAAVGLLSFFASFYGDGQVYLWLLNASGMSGFIAWLGIAISHYRFRRAFVAQGRSVSELPYRSLWFPFGTILAASMCILVIAGQAIGAFSDGSIDWKYLMASYIGIPLFLVFWLGYKFKHRTKVWSLKEVDLSTEH
>NZ_CP011388.1|WP_068606954.1|2842688_2843267_+|sigma-70-family-RNA-polymerase-sigma-factor
MSFDYLQSITAGLDRNAALHDLMTEFGSDVWNYIYFLTRYKETADDLAQEVFIKVYEKMYTFRGHSSVKTWILSITRNTVHDYRRSAWFRRVMLSSGFMTAQQETAPSAEQDYMKHALREETWEVVLELPIKLREVLLLYAHHQLPMQQIGDLLGISQGTVKSRLSRARAKVNQHMRVHEGADERMAQHEET
>NZ_CP011388.1|WP_068606956.1|2843253_2844843_+|extracellular-solute-binding-protein
MKKPDSFDWEAKLTGSPLNNAGFNKELMRKVRERVEMNEHTSRKRSWKTAVVSSVAAVILFVGSVTLWAAPGLWEDTRTAFTSLFQKEKTPDKPLPQLDPEKEYTLKFSHFNGDNFLMMQEGQSFIIRHPNMNLQVTQPRDFSKQEDISTWLDKTAPDVITIYSTEEFTKLIEDNRLLPLDTYAKRDGFALGEEAYEAGPMQLLREYGNGTLYGLAPQFETYAVYYNEELFKKFGVDLPTDNMTWDELLALADRFAGLKDGAQTIYGLEGSRNGMFDLIQQIGMTNNLRMGDLEKGKAYMNTAEWRVIWERVLAAYERGTVHTPEFFDTSKSYTYTKLLKKDAFASGYAAMKMERSSYVSGLLEYTQKENKSLKWNAVSAPVYAANPEESTFYSFNAIYAINANSQNPRAAWELIKHLNSKEVAQSHSYTYEFKLPTRSDVKWKQENVRRESFYTLRPSIGKMDLIQSHFPLYSLIKQASIQADLAAQGKKSLDDALTDVQQEAQHTIAELKAKNEDANTGKGADSEDE
>NZ_CP011388.1|WP_082882501.1|2844802_2846227_+|extracellular-solute-binding-protein
MPTPGKEQIPKMNKRRGSVRLGIQICISIIFLLLAGCTEAPEETGKGTLKILTYSQDSFDQMYENYFSIKFPDVEVEVIPISDNLEDPYAPVSNEQLKSKVERHRPDLLIIDERNYAKSSSMDLLYNLESWMAQDKVMHPDQFTPAAMDWARKFGGGDIYGLHPEFTTRVLFYNKTLFDRYDVPYPTDGMNWEDLILTAQRIVESQGDGDNIYGYHEMGIRNSAGLVNVISWSDRLLAYNYNLGKVTINTPAWNKAFTLATEAVRNGFFSNLKQTSTQIDGETYITKEDQENNDLFLKGKAAMTSEGMHLLERLEQKSPSFDWGIVTAPAGMSNPDMDTNYYPHPVMAIGANAENKELAWEVLKYFHGEEYAKVRSKLGTSNLSTRAGDKISKTGIALDTFYQRNQIHDKHELYVVDTHDEITREFYIAFDKLREEKTDLIITGKLTVDQALQAIQSEGQFLLDQAKKREKNTP
>NZ_CP011388.1|WP_082882756.1|2846414_2847125_+|LysM-peptidoglycan-binding-domain-containing-protein
MIHVPSAGAHEFSGTKLSEGDIRPPASTNIQSSLKPAYSSTHITSGTQATKATARTAIHRTPKPLQYKVSSGDTLYRIARKFGVTVEAIQTANRLVNPNALTIGKPLAIPARGTTPETLLSGTKVVRKVFMAKLTAYTAGYESTGKKPSHPAYGITSSGAKVKEGRTIAVDPRVIPIGTTVYIEGIGLRQAEDTGSAIKGARIDVFIQDLKQARKFGVKKDVKVYVLAGSTDVAAL
>NZ_CP011388.1|WP_068606963.1|2847181_2848003_+|protein-kinase
MFNYLRQRIEAWKDYPQRSGKRIGPYRIERYLGIGSYGITYICTNVRTGEALLLKQAKPSKGRRALELLRRESGMLKRLKDERIPAYHDFLDLKKSGYMVSELVHGSTVEELIFLEGRTFTEAEIVHFMLRLSDIVKYIHAQGIVHLDLRIPNVIVSEEDRLHVIDFGLARMIGDAIEDLPLTEPEEELAEFRLRRTPAVESDFYAMGHFMLFMLYAEYEPSPDEPERGWEEQLTLSAHVKGALRRLLQLDSPYRDADELQKHLILILNTLTD
>NZ_CP011388.1|WP_068606965.1|2847999_2848203_-|hypothetical-protein
MLKHLLSKLLHSLLGSKSGHNKHYRPYKHSSSDYKRRPTHFKHSSSDFKHSHRQGHKYYKNRYGSSS
>NZ_CP011388.1|WP_068606967.1|2848405_2848735_+|PadR-family-transcriptional-regulator
MNVQFKKGVLEICVLALVSKGDRYGYELAVKISERFEVAVGSVYPLLNRLTLDGLFSTYLQESSEGPPRKYYKLTDKGRGHMKELVQEWQTFTTAVNAFIAEGEGEGHE
>NZ_CP011388.1|WP_068606969.1|2848727_2849273_+|DUF1700-domain-containing-protein
MNKQAFFHQLESSLSEVPETQRQEWMYDYEEHFRIAEEEGRSEEEVVRELGEPQSIAKDLLLNYRVTVAEEHGTVPNVFRAVLAAVSLGFLNLLFVLGPFLGLCAVVCALWVSGGALIVAGIGFFGSGIYLGGGSILQGLFVGLLLSSAGVLVCYGMVKVTRTFLNLTLQYIRFNTKMVKE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP011388_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011388_9

4772299-4772484

Orphan

Consensus_repeat	Method
TTTGTAGCGATATCGCTACTAAT	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP011388_9

>merge|NZ_CP011388|9|4772299-4772484|CRISPRCasFinder
ATAGTAGCGTTATCGCTACTAAATTACTCTTCAATACCTACTGGAACTGAATTTGTAGCGATATCGCTACTAATGATTGAAATTAAGCCACCCAGATTACTTAGACCACTCTTTTGTAGCGATAACGCTACTAATCACATCACATAACGATTATAAAGTTGGAATTGTAGCGTCTTCGCTACTAAT

>NZ_CP011388|9|8|4772299-4772484|CRISPRCasFinder
ATAGTAGCGTTATCGCTACTAAA	TTACTCTTCAATACCTACTGGAACTGAA
TTTGTAGCGATATCGCTACTAAT	GATTGAAATTAAGCCACCCAGATTACTTAGACCACTCT
TTTGTAGCGATAACGCTACTAAT	CACATCACATAACGATTATAAAGTTGGA
ATTGTAGCGTCTTCGCTACTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011388.1\|WP_068610296.1\|4781018_4782140_+\|sporulation-integral-membrane-protein-YtvI	unknown	unknown	gnl\|CDD\|274334
NZ_CP011388.1\|WP_068610299.1\|4782155_4782557_-\|FxsA-family-protein	unknown	unknown	gnl\|CDD\|377238
NZ_CP011388.1\|WP_068610276.1\|4767016_4768660_-\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|377546
NZ_CP011388.1\|WP_068610284.1\|4770004_4771540_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|377524
NZ_CP011388.1\|WP_068610295.1\|4777272_4778796_+\|Ppx/GppA-family-phosphatase	unknown	unknown	gnl\|CDD\|223326
NZ_CP011388.1\|WP_068610281.1\|4769473_4769833_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068610278.1\|4768815_4769397_+\|5'-deoxynucleotidase	unknown	unknown	gnl\|CDD\|378993
NZ_CP011388.1\|WP_068610291.1\|4774493_4775789_-\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|180792
NZ_CP011388.1\|WP_068610300.1\|4782641_4784399_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235784
NZ_CP011388.1\|WP_068610288.1\|4773462_4774404_-\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|180477
NZ_CP011388.1\|WP_068610267.1\|4761911_4763225_-\|homocysteine-synthase	unknown	unknown	gnl\|CDD\|236201
NZ_CP011388.1\|WP_068610265.1\|4760949_4761843_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP011388.1\|WP_082882681.1\|4772736_4773339_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011388.1\|WP_068611287.1\|4778817_4780923_-\|polyphosphate-kinase-1	unknown	unknown	gnl\|CDD\|235469
NZ_CP011388.1\|WP_068610302.1\|4784489_4785446_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NZ_CP011388.1\|WP_068610271.1\|4764150_4765944_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|380161
NZ_CP011388.1\|WP_068610269.1\|4763373_4764084_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP011388.1\|WP_082882800.1\|4766030_4766945_-\|bile-acid:sodium-symporter	unknown	unknown	gnl\|CDD\|223462
NZ_CP011388.1\|WP_068610293.1\|4775862_4776978_-\|citrate-synthase	unknown	unknown	gnl\|CDD\|184467
NZ_CP011388.1\|WP_157279902.1\|4771635_4772187_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011388.1\|WP_068610296.1\|4781018_4782140_+\|sporulation-integral-membrane-protein-YtvI	gnl\|CDD\|274334	TIGR02872, UPF0118_membrane_protein_YtvI, sporulation integral membrane protein YtvI. Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E. Second, mutation leads to a sporulation defect. Third, it if found in exactly those genomes whose bacteria are capable of sporulation, except for being absent in Clostridium acetobutylicum ATCC824. This protein has extensive hydrophobic regions and is likely an integral membrane protein. [Cellular processes, Sporulation and germination].	3.28811e-88
NZ_CP011388.1\|WP_068610299.1\|4782155_4782557_-\|FxsA-family-protein	gnl\|CDD\|377238	pfam04186, FxsA, FxsA cytoplasmic membrane protein. This is a bacterial family of cytoplasmic membrane proteins. It includes two transmembrane regions. The molecular function of FxsA is unknown, but in Escherichia coli its over-expression has been shown to alleviate the exclusion of phage T7 in those cells with an F plasmid.	4.14855e-29
NZ_CP011388.1\|WP_068610276.1\|4767016_4768660_-\|fumarate-hydratase	gnl\|CDD\|377546	pfam05681, Fumerase, Fumarate hydratase (Fumerase). This family consists of several bacterial fumarate hydratase proteins FumA and FumB. Fumarase, or fumarate hydratase (EC 4.2.1.2), is a component of the citric acid cycle. In facultative anaerobes such as Escherichia coli, fumarase also engages in the reductive pathway from oxaloacetate to succinate during anaerobic growth. Three fumarases, FumA, FumB, and FumC, have been reported in E. coli. fumA and fumB genes are homologous and encode products of identical sizes which form thermolabile dimers of Mr 120,000. FumA and FumB are class I enzymes and are members of the iron-dependent hydrolases, which include aconitase and malate hydratase. The active FumA contains a 4Fe-4S centre, and it can be inactivated upon oxidation to give a 3Fe-4S centre.	7.0498e-98
NZ_CP011388.1\|WP_068610284.1\|4770004_4771540_+\|mechanosensitive-ion-channel	gnl\|CDD\|377524	pfam05552, TM_helix, Conserved TM helix. This alignment represents a conserved transmembrane helix as well as some flanking sequence. It is often found in association with pfam00924.	0.00038718
NZ_CP011388.1\|WP_068610295.1\|4777272_4778796_+\|Ppx/GppA-family-phosphatase	gnl\|CDD\|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	9.08252e-106
NZ_CP011388.1\|WP_068610288.1\|4773462_4774404_-\|malate-dehydrogenase	gnl\|CDD\|180477	PRK06223, PRK06223, malate dehydrogenase; Reviewed.	0
NZ_CP011388.1\|WP_068610278.1\|4768815_4769397_+\|5'-deoxynucleotidase	gnl\|CDD\|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	6.26972e-93
NZ_CP011388.1\|WP_068610291.1\|4774493_4775789_-\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|180792	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed.	0
NZ_CP011388.1\|WP_068610300.1\|4782641_4784399_-\|pyruvate-kinase	gnl\|CDD\|235784	PRK06354, PRK06354, pyruvate kinase; Provisional.	0
NZ_CP011388.1\|WP_068610265.1\|4760949_4761843_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.16011e-21
NZ_CP011388.1\|WP_068611287.1\|4778817_4780923_-\|polyphosphate-kinase-1	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
NZ_CP011388.1\|WP_068610302.1\|4784489_4785446_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NZ_CP011388.1\|WP_068610271.1\|4764150_4765944_-\|PAS-domain-S-box-protein	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	2.03493e-106
NZ_CP011388.1\|WP_068610269.1\|4763373_4764084_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.20135e-86
NZ_CP011388.1\|WP_082882800.1\|4766030_4766945_-\|bile-acid:sodium-symporter	gnl\|CDD\|223462	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only].	3.66236e-27
NZ_CP011388.1\|WP_068610293.1\|4775862_4776978_-\|citrate-synthase	gnl\|CDD\|184467	PRK14034, PRK14034, citrate synthase; Provisional.	0
NZ_CP011388.1\|WP_068610267.1\|4761911_4763225_-\|homocysteine-synthase	gnl\|CDD\|236201	PRK08248, PRK08248, homocysteine synthase.	0

>NZ_CP011388.1|WP_157279902.1|4771635_4772187_-|hypothetical-protein
MKFPMSNNNAGRSSSELRVVGQFHLVHHVLHVLRIVNMSKVLGMLAIMSVFGGMGGGAALADWAYKSVANDGYLYEVTDVKVEEARIGKKIGYVTKYSDREGSYSGNFSNAYAVGTGYYAIIGMGRKQAISVKVDEETYLMAEYRYSNKTQDWTYYVPYLIGATGVAAIALYRTHRNRRRLHR
>NZ_CP011388.1|WP_068610284.1|4770004_4771540_+|mechanosensitive-ion-channel
MNNERDFDNWDLYYWMNNNNLWRILAAIAILIIGLWVAKAVGKAISKGLSKTTVDRKGHIYLNPKTSVSSILGNVVKYFLYLVTILIVLELLSFSSILNPFVAFINSITVYIPFILAAVLLAAVAHILGTLLKSLVVRLLASNAVAKHTPYLTQYKDTIGTIVYALIILLFAPSILQSLHIDAISRPIGAVVNLIISFLPLIVTAVILIIIGHLIAKFVASLAQTLATSMNLQRWTGPEVNVPSIVRSVVYFLILFPIVVQALNVLQIDSIQQPAENILNLIMAWIPRIVVAAFLIYLGYIISKIVRNFTLTLLSPMKLDQKTYGLATMFNRRKNMLDAKGNPLGGGITPAPTLTTNGESMGVTTTWPITRWIANIVGILVFGFFLVEGTNVLGLEFISATVATLMALLPRLVLVAIIILGGIVLARMAAGLVSDSNPLKNFIQPVIIVLAVVIGLTEIGLASLIITSGFMIVLGALAITFIISVGIGSIPAVKNYWSKKQSSGSNNSTGL
>NZ_CP011388.1|WP_068610281.1|4769473_4769833_-|hypothetical-protein
MVLFLHLLGSIGLGFYLLLPFFSGRANNLPVLRSMNRVGMYLLILQFLTGGYLASQYDPTVAWYVTTAVLLVGLFAVTGIMGKKMKDGNAGAVQTLSAVNAILLILIVAIMYEPSWLPY
>NZ_CP011388.1|WP_068610278.1|4768815_4769397_+|5'-deoxynucleotidase
MEHHFMAYMYRLRYIGRWSLMRNTTQENVAEHSYHVALLTHMLCTIANEIYGKNVPADRAVTASLFHDSTEVITGDIPTPVKHHNPSILRHFREIEVMAADRLTEMVPESLRHIYDPLVHGRADDLIRPYLKAADLLDAYLKCVTELSAGNREFAVAKRQTEEAMLAMGMEEVDYFLTHLAPSFEKTLDELSE
>NZ_CP011388.1|WP_068610276.1|4767016_4768660_-|fumarate-hydratase
MNQFQESMIKLIVETSTNLPADVRRAVKAAKAKEDQGTRAALSLSTIAENITMAEDNVSPICQDTGMPTFVVHCPVGANQIAMKRDIREAVRMATKDTKLRPNSVDSLTGENSGDNLGAGTPVIHFEQWEKDEIDVRLILKGGGCENKNIQYSLPAQLEGLGKAGRDLDGIRKCILHAVYQAQGQGCSAGFIGVGIGGDRTTGYELAKQQLFRVVDDVNPNEQLAQLEDYILENANKLGIGTMGFGGAVTLLGCKVGVMNRLPASFFVSVAYNCWAYRRQGVLIDSATGGITEWIYTGGSEVSMTEETDVEATEAVLATGGGVIPSAQQGGGNVANEGRVIPLNQGGVDNTASERREIVLQTPITEEQIRQLRVGDVVIINGQMHTGRDALHSYLMDHDAPIDLNGQVIYHCGPVMSKDENGWRVRAAGPTTSIREEPYQGDIIKKFGIRAVIGKGGMGAKTLQALEEHGAVYLNAIGGAAQYYAECFKKVEGVDFMEFGIPEAMWHLQVEGFAAIVTMDSHGNSLHAEVEKNSLEKLAEFKEPVFK
>NZ_CP011388.1|WP_082882800.1|4766030_4766945_-|bile-acid:sodium-symporter
MFIVIPAALIAGFLASGPLQQFIPWVPGLFAYITLVMAWGCSFRSIRDELRHPASMLLLFALAHIAAPLIAYGIGAAVFGAASPYVVGLVLFTAIPLGVSSAIWVGLSGGSVPWILSLIVIDSLLSPAVVPLLVQAFFGADIHVDGAGMMMKLLIIIVLPTAAGVALCELSRGRIRAAAAPVAAPLSKLAFAAVVAINAAAIAPHISALRQDMVRVIPAVVLLVAACYALGLLGTYILPRTANPANYTYASGMRNISLGMVIGLAYFGPLAAVPVVLAILIQQPLATANYWFLAYRAKREFTKP
>NZ_CP011388.1|WP_068610271.1|4764150_4765944_-|PAS-domain-S-box-protein
MMKFRVRLTLIFIVLIGLSVLACGIFMARMFNQAQLESLKDNLVREGKIIMAQTDWLSGGTEKEQIAYYTSNAQHLRAVAEARVTFIREDGKVLGDSDNDPTFMDNHGDRLEVIQAKAKGVGSSTRFSATLKKNMLYVAVPVQQGADFKGYVRLSMSLEDVEARTRLVWFYLIVGLFIFFSMAGMLSYRIAHSLTRPLEKITRVANQITHMNYKSRVFIKNVDEIGQLGNAINTMADSLQFQMNRIQEDESRLKSVLENMISGVVMIDREGHIVLLNRSAEEILGFNSKELLGKTYDQAKQQYEMTQIIQECMEKKEHIRDELTFYFPEERILEINLVPMYHSETDWAGIVIVLHDISAIRRLERVRSEFVANVSHELKTPIAAVKGFAETLLAGAVNDEETARSFLQIIHDESDRLNRLIVDILELSKVESKRIPLYFSPIQMQPFILNTIDVMQTEAKRKQIDMDMHVDENLYLEADEDRLQQILINLLANGINYTPEGGKITVTAEAVDTAGNGEYDHVQIVIQDTGVGIPKKDIPRIFERFYRVDKARSRSSGGTGLGLSIVKHLVELHRGTIRVESSLGAGSRFIIELPVVH
>NZ_CP011388.1|WP_068610269.1|4763373_4764084_-|response-regulator-transcription-factor
MPHKILVIEDEPTLARLLSYNLTQEGYETRAVDHGGDGLQAALQHNYDLIILDIMLPGMNGFEILTKLRQKGNKTPVIILTARNAEDEVVQGLKHGADDYITKPFGVAELLARVSAVLRRTMSDDVASISSVSTDKVISIGDLQIFPEKYEVVLQGESIQLRPKEFEVLLYLVQRPGMVITRDDLMNIVWGFDYIGGQRTVDVHVSSLRKKLEMGQESVQIDSIRGVGYKLVITKR
>NZ_CP011388.1|WP_068610267.1|4761911_4763225_-|homocysteine-synthase
MSDEQNLSLDTLAVHGGQDLDPTTLSRAVPIYQTTSYGFRDTDHAANLFALKEFGNIYTRIMNPTTDVLEKRVAALEGGAAALAVASGQAAITFSILNIASSGDEIVSASSLYGGTYNLFAHTLPKLGIKTHFVDAADPENFREAITEHTKAIYAETIGNPKGDVIDIEAIAAIAHEHGIPLIVDNTFPSPYLCRPLEHGADIVVHSATKFIGGHGTSIGGIIVDGGTFDWKASGKFPGLTEPDPSYNGVVYTEAVGAIAYIIKARVQLLRDLGSALSPFNAFLLLQGLETLHLRMERHSANALKVASFLEAHEAVEWVSYPGLASHASYEQALKYLPDGQGAILTFGIRGGLEAGKSVINNVKLFSHLANVGDSKSLIIHPASTTHQQLGELEQESAGVSPGMIRLSVGTEAARDIIADLEQAIALSQQVYASASN
>NZ_CP011388.1|WP_068610265.1|4760949_4761843_+|AraC-family-transcriptional-regulator
MEIYNEKVTYENPLLSLKIFQSDRTDDVATTNWHYHKELEILLVLEGSLEVEVEDTFYSLSKGDIVLIGASQLHRDRSTGFLDYVVLQFDIQQFLDQNTLQYIRYFSDPQKPLSHFNHMLENNEDVKQTLVGCIKDILKEATAKEEGYEIAVNIRIKQMLLTLLRNDNERQLNRRDDFDLVRLKPVLDYIEENINGKVLVEDASKVANISYYYFVKYFKKVLGMSFTEYVNYKKIKRAEQLLLTKDLSIALVGEEIGMPNMAHFYKIFKKYNDCSPNEFRKKMLDWSHHERVTVPPV
>NZ_CP011388.1|WP_082882681.1|4772736_4773339_-|hypothetical-protein
MERKAGKTGLRKSMRNLVDTLVDVDKVEKKDGEFADAYTFYVERQIRESKGARLIRLQEVGIGHAESLFLEKVWWPIFGHFEYLHAEYEVRDFEDGYRFIDFAYIRGRYKIGFEVDPYGTHARDISRWDYDNQLERGNHLLIDDWLITRYSLNHVTNKSRRCQQFVLHLFGHWFGAFSDDDTEELNMREREIVKLFKGTN
>NZ_CP011388.1|WP_068610288.1|4773462_4774404_-|malate-dehydrogenase
MAITRRKITVVGAGFTGATTALMLAQKELGDVVLVDIPQLENPTKGKALDMLEASPVQGFDSKIIGTSSYEDTVDSDIVIITAGIARKPGMSRDDLVNTNAGIVKSVCENVKKYAPNSYVIILSNPVDAMTYVAFEALGFPKNRVIGQSGVLDTARYCTFIAEELNVSVEDVRGFVLGGHGDDMVPLVRYSNAGGIPIEKLIPADRIEAIVQRTRTGGGEIVNLLGNGSAYYAPAASLVQMTEAILKDKKRIIPVIALLEGEYGYDNLFMGVPAILGGDGIEKIFELELTEDEKAALEKSAESVRGVIRIVTA
>NZ_CP011388.1|WP_068610291.1|4774493_4775789_-|NADP-dependent-isocitrate-dehydrogenase
MPQFDKYTLPTEGQPITIDNGVLNVPNNPIVPFIEGDGTGPDIWAASQRVLDAAVEKAYGGEKKIAWYEVFAGEKSFNQYGEWLPADTLTAIREYIVAIKGPLTTPIGGGIRSLNVALRQELDLYVCLRPVRYFDGVPSPVKRPELVDMVIFRENTEDIYAGIEYQEGSEQVKKVLAFLQQEMGVNKIRFPETSGIGIKPVSAEGSKRLVRAAVEYAIAHGRKSVTLVHKGNIMKYTEGAFKNWGYEVAEAEFGDKVFTWDQYDRIKADKGVDAANAAQKEATDAGKILVKDAIADIALQQVLTRPTDFDVIATLNLNGDYLSDALAAQVGGIGIAPGANINYVTGHAIFEATHGTAPKYAGLDVVNPGSVILSGVMLLEHLGWQEAADLIYKGMTASINNKTVTYDFARLMEGATEVKCSEFANQIISNM
>NZ_CP011388.1|WP_068610293.1|4775862_4776978_-|citrate-synthase
MTATKGLEGIVATTSSISSIIDGFLTYRGINIDELAEQASFEEVVYLLWFGKLPNEAELNQLKQDLSGNAAIPAEVISQMKLYPQDSNSMAALRTAISSLALYDAEANDMSRDANVRKAIRLQAQLPTIVAAFARIRQGQEPLEPKQGVSIAHNFLYMLTGNEPDEVAVNALDTALVLHADHELNASTFAARVTVATLSDIYSGITSAIGALKGPLHGGANEAVMAMLEEIGSPEQVDGYIGEQLDNKVKIMGFGHRVYKNGDPRAKHLQKMSRELGELTGNLRWYDMSIKIEEIVTGQKGLKPNVDFYSASVYTSLEIPRDLFTPIFAISRVSGWAAHILEQFENNRLIRPRAEYTGPSNSKYIPLEQRS
>NZ_CP011388.1|WP_068610295.1|4777272_4778796_+|Ppx/GppA-family-phosphatase
MSSTRFGIIDIGSNSIRLMICEVTENGAYRVIDESKASARLSAHIDSNGNLPSSGIQIIIETLAYFKKLCEASGASSIRAVATAAVRNAVNADEIIRLTEEGSGIPVEILSGEEEARYGYLGVSNTLDIEEGYLVDIGGGSTEIAYFRNRKLQQSVSFPFGSVNTGKKYLRNGNLDAEGLTRIQAMVSQAMDKEPWIRKHPGLPLIGLGGTIRSVSKLDQKRKKYSLPLTHNYPMSAQDTDDWLSILMPMPLEKRKKVPGLAKERADIILPGLAIMQAVFRHTGSRHYIISGAGLRDGLFFEALSPDKPEIDNVLEHSVRNLMSLHPAIPYSHLEQVNRLAVTLFDHLQPFHALGARVREYVHVAALLYRIGVTINYYQYAKHTFYLMAHSRIDGLTHREILICSMIASHKSKSRTRSLFLEHKDILTESDFGLVMQIGSLLHLAIALDRSETQPVNKLQAEVFNKELLLSLQIAKLADIELKEIENVTPDFEKQWGLSVKTAVAPK
>NZ_CP011388.1|WP_068611287.1|4778817_4780923_-|polyphosphate-kinase-1
MKQEVIFLNKIHIGKDVPSRYVNRELSWMEFNKRVLEEAQDVQNPLLERIKFLSIVSSNLDEFMSVRVAGITEQVKAGVTRKDFTGYTPQGLLKRIMKRASGMVTLQSKAGRDLHRQLAKEGIHFTRYDDMSVNQQKTLDAYFHDIVFPVLTPMAVDQSRPFPLVHSLGLYLSVVLQREDEVAYEADEEPYFAIVQVPSILPRFVQLPSRPNSKKLEYILLEDLIKIHIQTLFSGYIPLAVHHFRLTRNADITLNEEDAEDLLEEIEKELRKRRWGIPVRLEVEKGMHPYALNLLKDEFEITDNVFEIDGALDLTYLMRFSLSIPGKDGLRFPKIDPVYPEEFAESEDLFNVLRQRDLLVYHPYESFKAVDDFLTEAAYDPQVLAIKMTLYRVSGNSTLVQALARAAESGKQVTVVVELKARFDEERNIAWARQLEKAGCHVVYGLVGLKTHAKITLVLRQEQDQLRRYVHVGTGNYNDSTARLYTDVGLFTSHPLIGEDASALFNDITGYSAPHNFQVFGVAPSSLKDKFFQLIAREKENALQGKPAYIIGQMNSLSNQEMIDLLYEASQAGVKIDLLVRGVCCLCPGVPGLSENIHVYSIVDRFLEHSRTFYFENAGDPEVFLASADWMTRNLTRRVELMCPVFDKQIRDSIINILQLKLSDNVKARQLLSNGTYARVTNDKPPLRSQFAAADTRLWKS
>NZ_CP011388.1|WP_068610296.1|4781018_4782140_+|sporulation-integral-membrane-protein-YtvI
MDRNLVRQMFRGLLVIIAIVLACLAFYYGTPLLYPFVIGWLLAYMLNPIIAMLQQKAKFPRWLAVTAALVVFIGIVTTFMAILVTRIVVETGVLLETIQNNLDKWIDDLLNLVNSDVIQGVAQQLSRLYEDNPDYQETVNNNLSSTAETLAGAVSKLITAFFDSVLVLIKLLPNIATIAIVILLATFFISKNWERLKQQISDWFPDKTVRTSTVIWSDLQKALFGYLRAQLILISITAAVVIIGLLILKVKYAITIGLLIGLVDLLPYLGTGAVMVPWIAYVYIYGDIRLGVGLSVLYGIILVARQILEPKVLASSVGLDPLATLISMFVGLKLFGVLGLIIGPVTLVILSAFAKANVFRDLFYFIRFGPRPK
>NZ_CP011388.1|WP_068610299.1|4782155_4782557_-|FxsA-family-protein
MFRIIVVLMVVVPALEIWGMLTMGRLIGGWQTFVFILMTGFVGAFLAKREARKVLAAAREQMQSGQVPGTPILDGICILVGGLLLLTPGFITDLLGFMLVFPLTRPLFRAGLQAFIQKKLSQGDRNLFKFTWR
>NZ_CP011388.1|WP_068610300.1|4782641_4784399_-|pyruvate-kinase
MRKTKIVCTIGPSSESLENTKKLINAGMNVARLNFSHGDFEEHGNRIKNIRQACQEMGKTVAILLDTKGPEIRLGKLAQEPIELQQGENITLTTEEMLGDITRIPITYKDLPKDVKVGSTILIDDGLIGLTVTGIRNGTEIDCVIVNSGQIKSKKGVNVPGVRISLPGITEKDANDIIFGIESGIDFIAASFVRKASDVLEIRQLLERYNAEHIQIISKIENQEGVDNLDEILEVSDGLMVARGDLGVEIPAEEVPLVQKRMIQKSNIAGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTSAIMLSGETAAGKYPVESVETMSRIALRAESALQYREIFVHQAAISQTSVTEAISQAVANTALDLEAKAIITSTESGYTARMVSKYRPKAPILAVTPSEQVMRRLAMVWGVIPVKGTAATTTDEMFDIAVNGGVSTGMLSLGDLVVITAGVPVGRAGTTNLIKVHHIGELIAKGQGIGSQSATGKIVIARSPEEAIQKMGNDSVLVTYSTDKEYMPAFEKAKAVITVGGGITSHAAVVGLNLGIPVIIGVNNAFDDLKDGMEVSVYAELGVIYTGQANVL
>NZ_CP011388.1|WP_068610302.1|4784489_4785446_-|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha
MAGELPFERPLVELRSKIEELQRFGAEKSIDFTDEIARLEERYARLKEEVYSNISASQKMHLARHHQRPTTLDFIHSMFTDFMELHGDRLFGDDLAIVGGVAKLNGIPVTVIGHQRGKDTKDNIARFFGSPHPEGFRKALRLMQQADKFKRPIITFIDTKGAYPGSAAEERGQSEAIARNLREMSGFGVPIICVVIGEGGSGGALAIGVGNRVLMLENAIYSVISPNGAASILWKDASRADEAAEAMKITADDLLGFGIIEEIVTEPKGGAHRDWDEQAGYVKEAVWKHLQELLKLNADQLRMDRYEKFRKVGKFTFV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NC_004041	Rhizobium etli CFN 42 plasmid p42d, complete sequence	234791-234818	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP021027	Rhizobium sp. TAL182 plasmid pRetTAL182c, complete sequence	308874-308901	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013633	Rhizobium sp. N324 plasmid pRspN324c, complete sequence	309590-309617	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013555	Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence	320395-320422	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP020950	Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence	341527-341554	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013587	Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence	263878-263905	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013598	Rhizobium sp. N741 plasmid pRspN741c, complete sequence	301152-301179	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013561	Rhizobium phaseoli strain N841 plasmid pRphaN841d, complete sequence	301055-301082	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013578	Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence	321929-321956	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013530	Rhizobium phaseoli strain R723 plasmid pRphaR723c, complete sequence	289624-289651	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013535	Rhizobium phaseoli strain R650 plasmid pRphaR650c, complete sequence	297227-297254	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013540	Rhizobium phaseoli strain R630 plasmid pRphaR630c, complete sequence	309123-309150	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013544	Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence	233805-233832	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013566	Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence	320108-320135	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013502	Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence	301074-301101	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013583	Rhizobium phaseoli strain N261 plasmid pRphaN261c, complete sequence	289624-289651	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013508	Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence	302352-302379	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013519	Rhizobium sp. N113 plasmid pRspN113b, complete sequence	303839-303866	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013572	Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence	321929-321956	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP021125	Rhizobium sp. Kim5 plasmid pRetKim5a, complete sequence	297944-297971	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013492	Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence	306402-306429	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013514	Rhizobium sp. N1314 plasmid pRspN1314c, complete sequence	301058-301085	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013497	Rhizobium sp. N621 plasmid pRspN621b, complete sequence	307602-307629	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013592	Rhizobium sp. N871 plasmid pRspN871b, complete sequence	301074-301101	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NC_010996	Rhizobium etli CIAT 652 plasmid pB, complete sequence	296510-296537	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013604	Rhizobium sp. N731 plasmid pRspN731c, complete sequence	301060-301087	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP017243	Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence	305637-305664	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP020898	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence	245845-245872	6	0.786
NZ_CP011388_5	5.1\|2342744\|28\|NZ_CP011388\|CRISPRCasFinder	2342744-2342771	28	NZ_CP013550	Rhizobium phaseoli strain R611 plasmid pRetR611c, complete sequence	335438-335465	6	0.786
NZ_CP011388_5	5.3\|2342856\|28\|NZ_CP011388\|CRISPRCasFinder	2342856-2342883	28	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	587415-587442	6	0.786
NZ_CP011388_5	5.3\|2342856\|28\|NZ_CP011388\|CRISPRCasFinder	2342856-2342883	28	NZ_CP053224	Sphingobium sp. RSMS plasmid pRSMS1, complete sequence	131404-131431	6	0.786
NZ_CP011388_5	5.3\|2342856\|28\|NZ_CP011388\|CRISPRCasFinder	2342856-2342883	28	NC_020542	Sphingomonas sp. MM-1 plasmid pISP0, complete sequence	255515-255542	6	0.786
NZ_CP011388_6	6.1\|2343029\|28\|NZ_CP011388\|CRISPRCasFinder	2343029-2343056	28	NC_010474	Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence	161141-161168	6	0.786
NZ_CP011388_6	6.1\|2343029\|28\|NZ_CP011388\|CRISPRCasFinder	2343029-2343056	28	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	123903-123930	7	0.75
NZ_CP011388_6	6.1\|2343029\|28\|NZ_CP011388\|CRISPRCasFinder	2343029-2343056	28	NZ_CP016482	Synechococcus sp. PCC 7117 plasmid unnamed5, complete sequence	86266-86293	7	0.75

1. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NC_004041 (Rhizobium etli CFN 42 plasmid p42d, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

2. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP021027 (Rhizobium sp. TAL182 plasmid pRetTAL182c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

3. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013633 (Rhizobium sp. N324 plasmid pRspN324c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

4. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013555 (Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

5. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

6. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013587 (Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

7. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013598 (Rhizobium sp. N741 plasmid pRspN741c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

8. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013561 (Rhizobium phaseoli strain N841 plasmid pRphaN841d, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

9. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013578 (Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

10. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013530 (Rhizobium phaseoli strain R723 plasmid pRphaR723c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

11. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013535 (Rhizobium phaseoli strain R650 plasmid pRphaR650c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

12. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013540 (Rhizobium phaseoli strain R630 plasmid pRphaR630c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

13. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013544 (Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

14. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013566 (Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

15. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013502 (Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

16. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013583 (Rhizobium phaseoli strain N261 plasmid pRphaN261c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

17. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013508 (Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

18. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013519 (Rhizobium sp. N113 plasmid pRspN113b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

19. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013572 (Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

20. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP021125 (Rhizobium sp. Kim5 plasmid pRetKim5a, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

21. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013492 (Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

22. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013514 (Rhizobium sp. N1314 plasmid pRspN1314c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

23. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013497 (Rhizobium sp. N621 plasmid pRspN621b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

24. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013592 (Rhizobium sp. N871 plasmid pRspN871b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

25. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NC_010996 (Rhizobium etli CIAT 652 plasmid pB, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

26. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013604 (Rhizobium sp. N731 plasmid pRspN731c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

27. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP017243 (Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

28. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP020898 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

29. spacer 5.1|2342744|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP013550 (Rhizobium phaseoli strain R611 plasmid pRetR611c, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcaccttgggcgaaatctcagaaa	CRISPR spacer
atcagtaccttgggcaaaatctcccgat	Protospacer
*****.*********.*******  .*

30. spacer 5.3|2342856|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 6, identity: 0.786

ttctgggctcctgccgctcttgagcata	CRISPR spacer
gacctggctcatgccgcccttgagcata	Protospacer
  *. ***** ******.**********

31. spacer 5.3|2342856|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP053224 (Sphingobium sp. RSMS plasmid pRSMS1, complete sequence) position: , mismatch: 6, identity: 0.786

ttctgggctcctgccgctcttgagcata	CRISPR spacer
gacctggctcatgccgcccttgagcata	Protospacer
  *. ***** ******.**********

32. spacer 5.3|2342856|28|NZ_CP011388|CRISPRCasFinder matches to NC_020542 (Sphingomonas sp. MM-1 plasmid pISP0, complete sequence) position: , mismatch: 6, identity: 0.786

ttctgggctcctgccgctcttgagcata	CRISPR spacer
gacctggctcatgccgcccttgagcata	Protospacer
  *. ***** ******.**********

33. spacer 6.1|2343029|28|NZ_CP011388|CRISPRCasFinder matches to NC_010474 (Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence) position: , mismatch: 6, identity: 0.786

atcagcccctttggcgaaatctcagaaa	CRISPR spacer
atcatcccctttggcgaaatctcgctgt	Protospacer
**** ******************.  .

34. spacer 6.1|2343029|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 7, identity: 0.75

atcagcccctttggcgaaatctcagaaa	CRISPR spacer
atcatcccctttggcaaaatctcgccgt	Protospacer
**** **********.*******.  .

35. spacer 6.1|2343029|28|NZ_CP011388|CRISPRCasFinder matches to NZ_CP016482 (Synechococcus sp. PCC 7117 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.75

atcagcccctttggcgaaatctcagaaa	CRISPR spacer
atcatcccctttggcaaaatctcgctgt	Protospacer
**** **********.*******.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

561009 : 572362

Prochlorococcus_phage(25.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068603950.1\|561009_562587_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.5e-69	46.8
WP_068603952.1\|563220_563865_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-23	36.0
WP_068603954.1\|563861_564905_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.3e-71	46.5
WP_068610787.1\|564943_566512_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.0e-50	31.2
WP_068603956.1\|566547_568794_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.8e-167	43.3
WP_068603958.1\|568771_569461_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_068603960.1\|569488_569737_-	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	1.4e-06	32.5
WP_068603961.1\|570126_571014_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	6.4e-41	34.5
WP_068603963.1\|571066_572362_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.7e-18	32.3

DBSCAN-SWA_2

1619875 : 1627424

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068605490.1\|1619875_1620793_-	NAD-dependent epimerase/dehydratase family protein	M4QPK0	Synechococcus_phage	5.6e-40	36.3
WP_068605492.1\|1621010_1622828_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_068605494.1\|1622883_1623966_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A2P1ELS7	Moumouvirus	2.4e-90	45.5
WP_068605497.1\|1623966_1624953_+	NAD-dependent epimerase/dehydratase family protein	A0A1V0SAI8	Catovirus	9.6e-38	31.4
WP_068605499.1\|1624949_1625774_+	SDR family oxidoreductase	A0A167RG57	Powai_lake_megavirus	7.8e-33	34.6
WP_157279807.1\|1625758_1626679_+	NAD-dependent epimerase/dehydratase family protein	A0A222YY99	Synechococcus_phage	5.0e-12	26.0
WP_068605503.1\|1626704_1627424_+	glycosyltransferase	A0A1V0SAH6	Catovirus	3.7e-07	29.2

DBSCAN-SWA_3

3707290 : 3714013

Planktothrix_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068608487.1\|3707290_3708304_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-18	28.9
WP_068608489.1\|3708303_3709329_+	ATP-binding cassette domain-containing protein	A0A1J0FA64	Only_Syngen_Nebraska_virus	4.8e-08	26.2
WP_068608491.1\|3709446_3710166_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.0e-20	27.6
WP_082882578.1\|3710268_3711045_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_068608495.1\|3711159_3712128_+	quinone oxidoreductase	E3SJ82	Synechococcus_phage	1.6e-08	24.6
WP_068608497.1\|3712157_3712988_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.9e-71	51.7
WP_068608499.1\|3713038_3714013_-	YpdA family putative bacillithiol disulfide reductase	G3MA85	Bacillus_virus	5.1e-07	23.2

DBSCAN-SWA_4

4187038 : 4196356

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157279956.1\|4187038_4188217_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	5.3e-27	32.7
WP_068609309.1\|4188409_4188862_-	sporulation protein YtfJ	NA	NA	NA	NA
WP_068609310.1\|4189049_4189505_+	hypothetical protein	NA	NA	NA	NA
WP_068609312.1\|4189501_4190179_-	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_068611205.1\|4190323_4190926_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.7e-16	34.3
WP_068609314.1\|4190894_4191698_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.8e-08	33.3
WP_068609316.1\|4191736_4192204_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.8e-42	56.3
WP_068609318.1\|4192196_4193429_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.0e-117	53.5
WP_068609320.1\|4193456_4194134_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.0e-38	43.6
WP_068611206.1\|4194134_4195268_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.8e-57	39.8
WP_068609322.1\|4195912_4196356_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	6.3e-21	43.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011388

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection