CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015594	Acinetobacter sp. NCu2D-2 chromosome, complete genome	2 crisprs	csa3,c2c9_V-U4,RT,DEDDh,cas3,WYL,TnsE_C	0	0	8	0
NZ_CP015595	Acinetobacter sp. NCu2D-2 plasmid unnamed, complete sequence	0 crisprs	c2c9_V-U4,cas14j,csa3	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015594_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015594_1

1411324-1411418

Orphan

Consensus_repeat	Method
GATTGGTTCTGCATTAGGTGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015594_1

>merge|NZ_CP015594|1|1411324-1411418|CRISPRCasFinder
GATTGGTTCTGCATTAGGTGGTGCAGGTGGTGCAGCAGCTTCTGCAAATAAACGCGACCGTACTGGCGCTGCGATTGGTGCTGCATTAGGTGGTG

>NZ_CP015594|1|1|1411324-1411418|CRISPRCasFinder
GATTGGTTCTGCATTAGGTGGTG	CAGGTGGTGCAGCAGCTTCTGCAAATAAACGCGACCGTACTGGCGCTGC
GATTGGTGCTGCATTAGGTGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015594.1\|WP_067730073.1\|1401994_1402594_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP015594.1\|WP_067730094.1\|1416104_1418477_+\|phosphoenolpyruvate-synthase	unknown	unknown	gnl\|CDD\|235809
NZ_CP015594.1\|WP_067730081.1\|1407402_1408230_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP015594.1\|WP_067730095.1\|1418781_1419558_+\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP015594.1\|WP_067730071.1\|1401673_1402006_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015594.1\|WP_101494834.1\|1423528_1423858_+\|cytochrome-o-ubiquinol-oxidase-subunit-IV	unknown	unknown	gnl\|CDD\|182568
NZ_CP015594.1\|WP_067730099.1\|1420918_1422907_+\|cytochrome-o-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|131890
NZ_CP015594.1\|WP_067730093.1\|1415112_1415949_-\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|235419
NZ_CP015594.1\|WP_067730091.1\|1411760_1412765_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_CP015594.1\|WP_067730092.1\|1414300_1414858_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224983
NZ_CP015594.1\|WP_067730079.1\|1405767_1406121_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015594.1\|WP_067730087.1\|1410528_1410945_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015594.1\|WP_067730077.1\|1404682_1405453_-\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|187629
NZ_CP015594.1\|WP_067730085.1\|1409097_1410186_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_CP015594.1\|WP_101494813.1\|1412861_1414084_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP015594.1\|WP_067731691.1\|1402692_1403853_+\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP015594.1\|WP_067730075.1\|1404112_1404625_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|379804
NZ_CP015594.1\|WP_067730097.1\|1419859_1420915_+\|ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|182518
NZ_CP015594.1\|WP_067730101.1\|1422911_1423532_+\|cytochrome-o-ubiquinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|131889
NZ_CP015594.1\|WP_067730083.1\|1408278_1409097_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467

Protein	Function_ID	Function_description	E-value
NZ_CP015594.1\|WP_067730073.1\|1401994_1402594_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.65688e-14
NZ_CP015594.1\|WP_067730094.1\|1416104_1418477_+\|phosphoenolpyruvate-synthase	gnl\|CDD\|235809	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated.	0
NZ_CP015594.1\|WP_067730081.1\|1407402_1408230_+\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.66798e-72
NZ_CP015594.1\|WP_067730095.1\|1418781_1419558_+\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	3.73888e-16
NZ_CP015594.1\|WP_067730075.1\|1404112_1404625_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|379804	pfam16242, Pyrid_ox_like, Pyridoxamine 5'-phosphate oxidase like. This domain, approximately 140 residues in length, is mainly found in general stress proteins in various Xanthomonas species. It is composed of a six-stranded antiparallel beta-barrel flanked by five alpha-helices and can bind to FMN and FAD, suggesting that it may help the bacteria to react against the oxidative stress induced by the defense mechanisms of the plant.	1.55479e-38
NZ_CP015594.1\|WP_067730099.1\|1420918_1422907_+\|cytochrome-o-ubiquinol-oxidase-subunit-I	gnl\|CDD\|131890	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. [Energy metabolism, Electron transport].	0
NZ_CP015594.1\|WP_067730093.1\|1415112_1415949_-\|kinase/pyrophosphorylase	gnl\|CDD\|235419	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator.	9.54612e-124
NZ_CP015594.1\|WP_067730091.1\|1411760_1412765_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP015594.1\|WP_067730092.1\|1414300_1414858_+\|hypothetical-protein	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	1.49051e-05
NZ_CP015594.1\|WP_067730077.1\|1404682_1405453_-\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|187629	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs. HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.54607e-122
NZ_CP015594.1\|WP_067730085.1\|1409097_1410186_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP015594.1\|WP_101494813.1\|1412861_1414084_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.0434e-35
NZ_CP015594.1\|WP_067731691.1\|1402692_1403853_+\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.34266e-85
NZ_CP015594.1\|WP_101494834.1\|1423528_1423858_+\|cytochrome-o-ubiquinol-oxidase-subunit-IV	gnl\|CDD\|182568	PRK10582, PRK10582, cytochrome o ubiquinol oxidase subunit IV; Provisional.	1.80351e-39
NZ_CP015594.1\|WP_067730097.1\|1419859_1420915_+\|ubiquinol-oxidase-subunit-II	gnl\|CDD\|182518	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional.	2.99234e-113
NZ_CP015594.1\|WP_067730101.1\|1422911_1423532_+\|cytochrome-o-ubiquinol-oxidase-subunit-III	gnl\|CDD\|131889	TIGR02842, Cytochrome_bo3_ubiquinol_oxidase_subunit_3, cytochrome o ubiquinol oxidase, subunit III. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. [Energy metabolism, Electron transport].	4.39181e-95
NZ_CP015594.1\|WP_067730083.1\|1408278_1409097_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	9.57577e-118

>NZ_CP015594.1|WP_067730087.1|1410528_1410945_+|hypothetical-protein
MKLNSILLGSAIALGSVVSVGAHADSTTRVAAASALGSVAGTAIGKNMGGNTGATIGAALGGAGGAAVASNKRNRTESAIGGALGGGTGYTVGKSVGGTNGGYIGSALGAAGGAALGNKIAKDKAADKRHYKKKRRYH
>NZ_CP015594.1|WP_067730085.1|1409097_1410186_-|peptide-chain-release-factor-1
MKESLRLRLDQLSDRHEELNALLADVEVISDNKRFRQLSREHSDLTEITNVWKQFTQAEADIETAEAMLSDPDFKEMAQEEIKENKALLEKLEADLNILMIPKDPNDANSAYLEIRAGTGGDEAAIFSGDLYRMYSKYAESQGWRIEILSENEGEHGGYKEVICLINGEGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTSVEINPSELRIDTYRASGAGGQHINKTDSAVRITHIPTGTVVECQDERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAVMEGDLTELLDSLHREYQADQLALLAQQNGG
>NZ_CP015594.1|WP_067730083.1|1408278_1409097_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MNIAQALALRGEPESYERQENAWLLEHITNIDSFDLVMKKDKELTAEQEQAYVDSLARIAAGEPLAYVTGSQPFWTLDLKVTKDTLVPRPDTEVLVETVLKLDLPEDARIADLGTGTGAIALSLASERTEWSVVASDIYEPTLEVAEYNAEIHDIDNVKFVLGSWLKPFGRQFFDVIASNPPYIDANDVHMKDLATEPERALVAAKNGLADLEEIIVQAKKHLTINGWVVLEHGYDQADAVQHLFRQAGYKQVRTVKDYGGNDRVTLGQWQH
>NZ_CP015594.1|WP_067730081.1|1407402_1408230_+|ABC-transporter-permease
MSTPKTLSVALIEKEQSKSAALYKLIQLSKALTIPVIFIVLCEFLVRNGVIEPYLLPAPSSLLQSFVELAQADLWQHIWTSSWRVFLGFAIGSGLGLIFAIFVGLNKQAEDFLEPTFSAIKSIPSLAWIPLLLLWLGIDESSKITLIAIGAFFPAYTNTVAGIQGVDRKLIEVAKVYRLNYLQQIKQIVLPAASPNILTGLRNSLSLSWMFMIAAELIAATQGIGYLLSDGRETSRPDIVIIAIILLAILGKITDSLMKVAEVYLLRWRDVIKAK
>NZ_CP015594.1|WP_067730079.1|1405767_1406121_+|hypothetical-protein
MSKMIDVLEQQVVQNFSQAFFHSSDLVAEQLKNSVLNASEAKLKDAIAAFFKTFNANEAAQVLEIPTERIGDMQNGVALKDESGLVDTLKVVTLCLAMETNLIEKIEVSDCVKDFPM
>NZ_CP015594.1|WP_067730077.1|1404682_1405453_-|3-hydroxyacyl-CoA-dehydrogenase
MDIQNKVFVVTGGASGLGAATAKYLGERGARVLMVDMNLELGQQLQQELGDQAEFHQLDVTNEAQVESFFQTIAQTHAQLNGLINCAGIAPSAKVLGREGLHDLAMFQRTLNINVTGTFNMLRYAAELMSNYQLKEGEEERGVIINTASVAAFEGQIGQVAYSASKGAVVAMTLPLARELAKHAIRVMTIAPGIMETPMLKGLPQNVQDSLGQMVPFPPRLAKPSEYAQLVGQIIENAYLNGEVIRLDGAIRMAAK
>NZ_CP015594.1|WP_067730075.1|1404112_1404625_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MTSQNSNHENRQKLWELLKEVRFTMISHQTENNEIHAQPMTMLNSDKLNEHENLYFLLKDTNDIVKALSAGRSNLGLTFSKPSNDTYISISAEGHITTDRTLIETLWNPWAENWFDGKDDPSVRVLVAKAISAEYWDVKDNKVTSLFKVLKANVTGETQEPDTDHQKLDL
>NZ_CP015594.1|WP_067731691.1|1402692_1403853_+|multidrug-effflux-MFS-transporter
MPLLIALLATIGPLGIDMYLPSIPAMAASLGSNEGAVQLSLMTFFAGLMLGQLIYGPLSDKFGRKPLIYLGLSIFVLGSIACSMAENVLQLQWIRFIQGLGGSIGMVIAFAIIKDQFHGPEMGKMMSMVLAILGLSPVAAPLIGDALQHLGSWRTIFLFLAIYAAAVMALVAVFLPETRGEEQRAEFKLNQTFHHYVNIATDRKFIIYALTLCIAQAGFFAYIAGSASVFISEYQLSSTQFSLLFAVNAFGLIAAAILNPKLHEKFGVLNAYKVVNIAYFIVITLLLLYLYFGINHLAIMCIGLFIAVALLGFIMPTGSQLALMHQGRNAGTASALLGSMQFGFGAIITTITGLFAAYAGLGLISIIFVCAALSAAMCLILFPKKL
>NZ_CP015594.1|WP_067730073.1|1401994_1402594_-|TetR/AcrR-family-transcriptional-regulator
MPKLGRPIVMTVDERRNTIFNSAEKLFGEKGFEHVTMSEIAQAAGMSKKTLYVHFSDKRELLKSLVTSSYIWSTDAFSQESLEPVAALTQCLKMIANHVLSERHIKLCRLAIAEQVGIEGLADTFYEMGISASRNHLIEMISNIPVESKVLKLPDESIADMLFGGCISKSFIDSLFAHKGVDLQEIYIQIDRAIDALFI
>NZ_CP015594.1|WP_067730071.1|1401673_1402006_+|hypothetical-protein
MIHNLSNEFRTQQEFHQKFYLSYFILILLTALPFYLEHIETDAKNKAKININNYANKMLKINIHNQPSKEAYKILCSQNLCAILVINGKEKSLEYYDPKDISFPLKSLNK
>NZ_CP015594.1|WP_067730091.1|1411760_1412765_+|LLM-class-flavin-dependent-oxidoreductase
MPNLAETKFSILDLVPVREDKSILSSLHHALELAKHAESLGYERLWLAEHHNMSGIASSATSVLLGYLLANTKTLKVGSGGIMLPNHAPLVVAEQFGTLATLYPERIELGLGRAPGTDQNTMRALRRGQRETEDQFPQDVLEILQYFKDPQPEQRIIATPGQSTHVPVWLLGSSLFSAQLAAKLGLPYSFASHFAPRMLGQAIEIYRDNFKPSEYLDKPYVSMGVPTVIADSDEEAHFLATSPYQRIIAMFRNQRGKLKPPIHNIDEIWSPSEKMSVQQFFGMAQIGSKDTVKAGLERLLQRYEVDEFIFTCDIYDIDKRLKNFDLLMEIKNSI
>NZ_CP015594.1|WP_101494813.1|1412861_1414084_+|IS3-family-transposase
MEHKREQRVKRTQRDYSFAFKMMVVHEVEKGQITYKQAQAKYGIQGRSTVLVWLRKHGQQDWTSNMPTSSKRQLTPQQRIRQLEKQLAAEKLKTEFIQDVIYHIDKECGTDLGKKVYRARFKDWQSQRRLSVSRYCQWLGITRQAYYQAEKRAQMTAQATEQILELVMEYRCLMPSIGTRKLYWLIKGKLLQRGLKCGRDQLFKILKENNLLIRPKRCYTKTTDSKHWMKKHPNLLKDYSAVQANEVFVSDITYVESAEGVHYLSLVTDAYTRQIKGYKLSNDMRAENVVQALHMAMQQATDRATRMIHHSDRGAQYCSELYQSALRHYGICPSMTDGKDCYQNALAERINGILKQEFLTTRCQTMKELDHLIAESIMIYNCYRPHLSLNMNTPNQMYEQTKTELIA
>NZ_CP015594.1|WP_067730092.1|1414300_1414858_+|hypothetical-protein
MALTHQKNKPHHNYSNVNFDAFKGTAIPSQQIKDVDFGNKNVLIIGINQMIVTHLNGIVQHASSVKVFQNRPAFIIPNSETKIANLIYHPLIRKNRRLFSQRIKSLIAMRFLDIEVQDQWLKSQLTPNLAHVKKMFLKSDKYYLALQKPNCQLITWPIIDVFSESIQTVNQENHAGDLIIFAENE
>NZ_CP015594.1|WP_067730093.1|1415112_1415949_-|kinase/pyrophosphorylase
MLESKQIKRSVFFISDGTAITAETLGHSLLAQFPHVDFDIHIIPYISSEEAATNVVAEINARAHQDGQKPLVFDTLVDPYVRDIINTADAVNLDVFEGLIGKLSEELGTEPTTLVGQTHAVTDTESYKARIDAVHFALDNDDGARTRHYDKADLILIGVSRSGKTPTSIYLSLQFGIRVANYPLTEEDLDDNRLPAVLRPHKNKLFGLMIDADRLVAIRSERKANSRYASFNQCQMELRAIEGIYISEGIKFLNVSEMSIEEISTRILQMTGLKRRIS
>NZ_CP015594.1|WP_067730094.1|1416104_1418477_+|phosphoenolpyruvate-synthase
MEARVIGLEKLGKHDVELVGGKNSSLGEMISHLSNAGVSVPGGFATTAEAYREFLELSGLNAKINAELAALDVDDVNALAETGAKIRQWIVEAPLTPALEQEVRAAFAELSNGNPDIAVAVRSSATAEDLPDASFAGQQETFLNIRGIDNVLIAIKEVFASLYNDRAISYRVHQNFAHDVVALSAGVQRMVRSETGAAGVMFTLDTESGFRDAVFITASYGLGEMVVQGAVNPDEFYISKPLLNAGKHAILRRNLGSKHQKMIYGEEAAAGKSVVVVDVEKADRQQFALNDAELHELAKQALIIEKHYGAPMDIEWAKDGDDGKLYIVQARPETVKSRENVGTMERYLLKQKGTVVCEGRSIGQRIGSGKVRIVTSIKEMDKVQDGDVLVSDMTDPDWEPVMKRAAAIVTNRGGRTCHAAIIARELGVPAIVGCGNATEVLVDGQDVTVSCAEGDTGFIYEGSLDFEIQTNSIESMPELPFKVMMNVGNPDRAFSFAQIPNAGIGLARLEFIINRMIGVHPKALLNIDSIPRETRAAVMARTAGYASPIEFYVEKLVEGISTLAAAFADKPVIVRMSDFKSNEYANLIGGKLYEPEEENPMLGFRGASRYVSDNFRDCFELECRALKKVRDEMGLTNIQIMIPFVRTVSEAKRVIELLAANGLKRGENGLKVIMMCELPTNALLADQFLEHFDGFSIGSNDLTQLTLGLDRDSGIVSHLFDERDAAVKVLLSMAIQACRKAGKYVGICGQGPSDHPDLAKWLMEQGIESVSLNPDSVLETWFFLSEDQAN
>NZ_CP015594.1|WP_067730095.1|1418781_1419558_+|RDD-family-protein
MQIYLARNNQQAGPYTVEQLNQMLASQQVLLTDLAWHQGMTEWKALGELTQGKSYYQPEGYVAPSIPSPSESIQNPQNVTASHSVKVVQLASIPSRILAKIVDMLLWLPATFLLTAFFTDEQKIQFAKLNEQFMGILMSSNPDANLASQLQSEMFALFPQQALMASSLYLLVMLAVQAFLIAKSGQSIGKKMTKIKIVDAQSAEKVSLLRAFTIRSVFFIFLNIVSMPLSTIIDLVFGLGKKRQTLHDKLAKTQVVKQ
>NZ_CP015594.1|WP_067730097.1|1419859_1420915_+|ubiquinol-oxidase-subunit-II
MRQTILAVLSLSAMTALLTGCGGDMVLLNSKGPVAEGQSNLMMTAIYLMLLVVIPSIIMALWFGWKYRASNKDADYKPTWAHSTAIEIVVWGIPVIIIGILAWLTWWGSHKYDPYRPLESDKAPLTVQVIAEQFKWIFIYPEQEIATVNEIRFPLDTPVALRLTSNFTMNSFFIPSLGGQIYAMAGMQTHLNLLATEASPAEGYRGFSSNYSGYGFSQMRFRAHAVTDAQFAEWVSAVKAGNGTSVNPEAVQKTVLDQAEFATLRDGNRGKHQIEALIAKAKTPEEKAAAEATKPYPTKPHPVTYYSSVEKGLFESVINKYMSNYHGADDSAAAASEAHADVEHATASQGE
>NZ_CP015594.1|WP_067730099.1|1420918_1422907_+|cytochrome-o-ubiquinol-oxidase-subunit-I
MSLLGKLGPDAIPYDPIVLVTVAMMILGGIAVVAGITYFKKWGYLWNEWFTSVDHKKIGIMYLFVSIIMLLRGFADAIMMRLQLFLAKGGGEGYLHPEHYDQIFTAHGVIMIFFVAMGLVVGLMNISVPLQIGARDVAFPLLNSLSFWLFAGAAGLMMVSLALGEFAATGWMAYPPLSGIEYSPGVGVDYYIWALQVSGLGTLLTGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTSVLIIASFPVLTATIAMLTLDRYFGFHFFTNDLGGSPMLYVNLIWTWGHPEVYILVLPAFGIYSEVVATFSRKTLFGYKSMVYATIAITVLAFVVWVHHFFTMGAGANVNAFFGIMTMIIAIPTGVKIFSWLFTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGGVVFAMFAGIIFYWPKMFGWRLNETWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYDNPEWDPYLAIAFFGSILVLFGILCFIMQIVVGFLQRDQRLDLTGDPWDGRTLEWATSSPAPFYNFAHLPKINGIDTFWNDKEAGIAYVKPTSYEDIHMPTNRAAGIVIGLIITVMGFALIWHIWWLAIATFVAAIISFIVSSFTKKVDYYVPAAEVERIENERYAILEKHLKKD
>NZ_CP015594.1|WP_067730101.1|1422911_1423532_+|cytochrome-o-ubiquinol-oxidase-subunit-III
MAEVLHHENHGHDEHHHHDDTDITVFGFWTYLMSDLVLFGTLFIAFAVLSSHVPVGTPSAKELFGESLGFVLTETFALLISSVTFGFAVLAAYKKDVAKVLTWLAITWVFGAAFIGMELYEFSHLVHASHGPSTSAFLSAFFTLVGTHGIHVTSGLVWMIVLMIQIKKYGLTLPNTRRLACLSLFWHFLDIVWICVFSVVYLMGVL
>NZ_CP015594.1|WP_101494834.1|1423528_1423858_+|cytochrome-o-ubiquinol-oxidase-subunit-IV
MMSHDHNAAGASHGNTKQYTIGFILSVLLTVIPFGMVMAGGFSRGLLVAVIAITAVAQVLVQLVYFLHMNSSSEQRWNVIAFVYTILCIAVLLIGSVWIMNYLHYNMMI

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Crispr_ID: NZ_CP015594_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015594_2

2521080-2521221

Orphan

Consensus_repeat	Method
AAGATGATACTTTATTACTGG	PILER-CR

2 spacers

TnsE_C

The CRISPR arrays of NZ_CP015594_2

>merge|NZ_CP015594|2|2521080-2521221|PILER-CR
AAGATGATACTTTATTACTGGCTATCTTATAGAATTAAGAATGCATGATGATATACGATGATACTTTATTTTCAAAATTTATGATCAGTAGCTATAAAAATCAATCATATATTAGTGATTCAAGATGAAACTTTATTACTGG

>NZ_CP015594|2|1|2521080-2521221|PILER-CR
AAGATGATACTTTATTACTGG	CTATCTTATAGAATTAAGAATGCATGATGATAT
ACGATGATACTTTATTTTCAA	AATTTATGATCAGTAGCTATAAAAATCAATCATATATTAGTGATTCAAGAT
GAAACTTTATTACTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015594.1\|WP_067731448.1\|2516097_2517780_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379165
NZ_CP015594.1\|WP_067731452.1\|2522688_2523708_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|187558
NZ_CP015594.1\|WP_067731455.1\|2526640_2527516_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP015594.1\|WP_067731447.1\|2513901_2516064_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP015594.1\|WP_067731449.1\|2517782_2519315_+\|TniQ-family-protein	unknown	unknown	gnl\|CDD\|377670
NZ_CP015594.1\|WP_067731444.1\|2509745_2511110_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|224128
NZ_CP015594.1\|WP_067731459.1\|2530206_2531376_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP015594.1\|WP_067731446.1\|2513114_2513918_+\|heteromeric-transposase-endonuclease-subunit-TnsA	unknown	unknown	gnl\|CDD\|378036
NZ_CP015594.1\|WP_067731441.1\|2507837_2508287_+\|transcription-antitermination-factor-NusB	unknown	unknown	gnl\|CDD\|234686
NZ_CP015594.1\|WP_067731442.1\|2508307_2509225_+\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|235583
NZ_CP015594.1\|WP_067731457.1\|2528408_2529209_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133029
NZ_CP015594.1\|WP_067731460.1\|2531376_2531934_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|376414
NZ_CP015594.1\|WP_067731443.1\|2509202_2509724_+\|phosphatidylglycerophosphatase-A	unknown	unknown	gnl\|CDD\|368021
NZ_CP015594.1\|WP_067731454.1\|2525373_2526630_-\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223936
NZ_CP015594.1\|WP_067731450.1\|2519426_2521025_+\|hypothetical-protein	TnsE_C	TnsE	gnl\|CDD\|376049
NZ_CP015594.1\|WP_067731451.1\|2521260_2522628_+\|phosphomannomutase/phosphoglucomutase	unknown	unknown	gnl\|CDD\|185312
NZ_CP015594.1\|WP_067731445.1\|2511122_2512961_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP015594.1\|WP_157883277.1\|2529216_2530074_-\|rhamnosyltransferase	unknown	unknown	gnl\|CDD\|133017
NZ_CP015594.1\|WP_067731453.1\|2523700_2525371_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234679
NZ_CP015594.1\|WP_067731456.1\|2527738_2528380_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|274395

Protein	Function_ID	Function_description	E-value
NZ_CP015594.1\|WP_067731448.1\|2516097_2517780_+\|AAA-family-ATPase	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	2.2056e-20
NZ_CP015594.1\|WP_067731452.1\|2522688_2523708_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP015594.1\|WP_067731455.1\|2526640_2527516_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	2.47979e-141
NZ_CP015594.1\|WP_067731447.1\|2513901_2516064_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.0891e-06
NZ_CP015594.1\|WP_067731449.1\|2517782_2519315_+\|TniQ-family-protein	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	7.66239e-17
NZ_CP015594.1\|WP_067731444.1\|2509745_2511110_+\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|224128	COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane].	0
NZ_CP015594.1\|WP_067731459.1\|2530206_2531376_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.59339e-34
NZ_CP015594.1\|WP_067731446.1\|2513114_2513918_+\|heteromeric-transposase-endonuclease-subunit-TnsA	gnl\|CDD\|378036	pfam08721, Tn7_Tnp_TnsA_C, TnsA endonuclease C terminal. The Tn7 transposase is composed of proteins TnsA and TnsB. DNA breakage at the 5' end of the transposon is carried out by TnsA, and breakage and joining at the 3' end is carried out by TnsB. The C terminal domain of TnsA binds DNA.	3.12275e-14
NZ_CP015594.1\|WP_067731441.1\|2507837_2508287_+\|transcription-antitermination-factor-NusB	gnl\|CDD\|234686	PRK00202, nusB, transcription antitermination factor NusB.	3.72595e-54
NZ_CP015594.1\|WP_067731442.1\|2508307_2509225_+\|thiamine-phosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	1.39534e-133
NZ_CP015594.1\|WP_067731457.1\|2528408_2529209_+\|glycosyltransferase	gnl\|CDD\|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.43755e-33
NZ_CP015594.1\|WP_067731460.1\|2531376_2531934_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|376414	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase. This family catalyze the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.	2.1378e-110
NZ_CP015594.1\|WP_067731443.1\|2509202_2509724_+\|phosphatidylglycerophosphatase-A	gnl\|CDD\|368021	pfam04608, PgpA, Phosphatidylglycerophosphatase A. This family represents a family of bacterial phosphatidylglycerophosphatases (EC:3.1.3.27), known as PgpA. It appears that bacteria possess several phosphatidylglycerophosphatases, and thus, PgpA is not essential in Escherichia coli.	4.19336e-46
NZ_CP015594.1\|WP_067731454.1\|2525373_2526630_-\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl\|CDD\|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	8.03804e-74
NZ_CP015594.1\|WP_067731450.1\|2519426_2521025_+\|hypothetical-protein	gnl\|CDD\|376049	pfam18623, TnsE_C, TnsE C-terminal domain. The bacterial transposon Tn7 facilitates horizontal transfer by directing transposition into actively replicating DNA with the element-encoded protein TnsE. Structural analysis of the C-terminal domain of TnsE identified a central V-shaped loop that toggles between two distinct conformations. It is suggested that a conformational change within the C-terminal domain of TnsE underlies target site selection by regulating stable engagement of the target DNA while providing a signal for activating transposition.	2.4399e-49
NZ_CP015594.1\|WP_067731451.1\|2521260_2522628_+\|phosphomannomutase/phosphoglucomutase	gnl\|CDD\|185312	PRK15414, PRK15414, phosphomannomutase.	0
NZ_CP015594.1\|WP_067731445.1\|2511122_2512961_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP015594.1\|WP_157883277.1\|2529216_2530074_-\|rhamnosyltransferase	gnl\|CDD\|133017	cd02526, GT2_RfbF_like, RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.	1.56273e-81
NZ_CP015594.1\|WP_067731453.1\|2523700_2525371_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
NZ_CP015594.1\|WP_067731456.1\|2527738_2528380_+\|sugar-transferase	gnl\|CDD\|274395	TIGR03022, WbaP_sugtrans, Undecaprenyl-phosphate galactose phosphotransferase, WbaP. The WbaP (formerly RfbP) protein has been characterized as the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. This model includes the enterobacterial enzymes, where the function is presumed to be identical to the S. typhimurium enzyme as well as a somewhat broader group which are likely to catalyze the same or highly similar reactions based on a phylogenetic tree-building analysis of the broader sugar transferase family. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. The most likely heterogeneity would be in the precise nature of the sugar molecule transferred.	3.43716e-108

>NZ_CP015594.1|WP_067731450.1|2519426_2521025_+|hypothetical-protein
MIKIKNFPENARITFLGSIFKERKNTECYINIGLENYKYSIENQRYILKYARFSNMPLLARNRRFNQTETFIPFNESTITIQIDNFQKWNILINDSGQYNFSNIVSDINEKYKDIEIILPQIELARVLFLHNAYLSRSALNQTRLSGEFDIIKGENQTLINIPTFCNFPLSQYDNVGMRRLLAWILLDTEARTSFESISKNFLSEKFQTKVREYWNFNFIPPSLKGAEITLKVYFSPKKNKYYVNEILAISNLPSEINHTVIFCSPKFTVKNTQESSQGSSRGSKHLQEEDPIIDDKKEANSDKKIAIIDSPKITLALSSPFETKKAVIKRSGKKGSFNNDDITILPEPDVGTGESTIFGEIGRGEFENCQDESDDLKLFMKRFESFQAMIEEFRSQNNILSKFRFTISKLPAVNRSKLHKTDDGNFRSIAEVQLEFQGKKFSILEIDTSDNYKPLSTLIVKVENFEAWDQNFPIFKQQIIRRSLRWPTAKSLKDIGIPKGINHPKNKFEISESDKEFTDWLKRFTEVLKSA
>NZ_CP015594.1|WP_067731449.1|2517782_2519315_+|TniQ-family-protein
MLNFPMPYEHELIYSTVARAGIRLAFESPKQLLDAVFQNRKVIATVDLPCHLNSIVNQYTEEQLSLQNIIYKHTLFPIYAPFVPETRRQQCFKWMANISQGSVHLSLGINASRVPVIHRLRYCPQCLKEQALQKGEFYWLRLWQIQGACCPQHGRLVESTIDLRSLHRHDFMVPSDVFCTEWNQVPATSDELFISSKLIELLSTPPFVSSSYEQWTMFYNELARRNDCIRGQNQIAFDQILEKILLRWPQKFLRQYHLDDLASETSWLRHIFRKHRKSFSYLEHIIVIEAFLNADWSFADMFTQVKSFKKVTTQQNNQTKYQDANFEITRAENREKWVDLVQNHGVKPARHLQAALYAWLYRNDKDWLLQTNQNFHQKFIPQGTKIDWQKRDLLYVRQLIQLKNTLIWDLDSPRRSMKWWLKQTSTSNTLEKNLHKLPLIRRFLERYCEDISCYQIRRLTKVFIDSNLNRQPLPQWRILRKAGLSEDRMTSETKKFLEYIIHEFPNMIQN
>NZ_CP015594.1|WP_067731448.1|2516097_2517780_+|AAA-family-ATPase
MTNKNDHAVYTESPVSDYQGNPFIEALPEIFEAKDTIQAIRGTIEFKLSDRQLPNNTRAHIISQLLNNFFHPIKRHLTLEQKISIMLRKGYVGRNITTGDLNRHLQNSFEHIKSNDFNASRHTDLISTAQSLVFIGFSGSGKTTTLNRILRNYPQKIYHPEHNFTQLVYLKIDCPYNGSLKSLYLSFFSAVDRALGTNYEQQYTQKRHNEQKLLQLMGHIAHLHAIGLLVIDEIQHLMANRSKNSDEMLNFFVTLVNIYSLPIIMVGTPKASNIFERDLRSSRRAVGFGSIHWEPIKNEPVIKTPDGKVRKSEWMTFTDALWKYQWLRKADLALSEELRQCWFDLTQGILDVTVKLFVLAQIRAIESGLERITVKLLQNTYQEDFKPIHHIIDALRSGDARRIAQYPDLITPEIDRQLLKLFSKIEESAIEQEDELDEYQGHDESMRLHALLLELGYDSKILIPMVKKVFIKHPDKHLTELLPIIMDWLKQDVDPTKSPSLSKPKTSKPKLLKYDQWHTLDSLDLRFQFSQKESDQSFYDHLKAQTDLIFNISNWIKQVS
>NZ_CP015594.1|WP_067731447.1|2513901_2516064_+|DDE-type-integrase/transposase/recombinase
MFRINSVYKFQGKDYRILKIIPSHIIWIDLNHPNANPSIIKKEELITAIEVGEAEITDDPFADISLINVTEGSVQQKKRDMGMNIIDLLISNEHFYDPSIRFSLVKIIIEQHKTTHQTIYRLARRYWQRGQTPNALIPSYNNSGAKGVKRIAKNKKLGRPRKYSEGVGALVDQNVERLFRININKYMLTKDKYSLSYAYRKFSTMYHSLFPDIADSEIPTIWQFKYFYEREFPKVTQLTARTNPIIYAKDIRELHSTVNTQVLGPGSRYEIDATIADIYLVSDSDRACIVGRPTIYLVADVFSRMVVGFYIGFENASYVTAMQALQVAMTDKVELCKQYGYEITYDDWPCIGLPDAILADRGELLGHQIEALEYNFSIRIENTAPYRGDLKPIVERYFRTIQTKFKPFASGVVQQVKEKKRGGSDYRLDATLTITEFKQIIIGSILAHNTSHQLTTYDRDIDMPSDLPLVPIHLWNWGIQHRVGQLKQVSEKALRVALLPKIKATLSDLGLKMFGVFYNCPEIYKQGWMHRKKSISRPESFQVAYDPSNAEIIYVFYQEHSLDYWEATLSPRSREFMGCSFWEVWQVQHEQKKTKAAQNLKTNRSQANLEEHIESIIARADAKKPSSTLSKKERLTDLRKNKQAEKDSERLKQRNNSQKSSKSAFTVLDHSEQSSENQSNIIPMPKSRQFIDLENDEDYKLRFGIYQELLDDLGDSGDEN
>NZ_CP015594.1|WP_067731446.1|2513114_2513918_+|heteromeric-transposase-endonuclease-subunit-TnsA
MVTEHQQKRWIKEGRGQGYLKDYKPWITVRDVSSKGRSHRVFGHTTKRTHHLLSDLELAIFLLLDWNPLITDIREQFPLPLNTTLEISEGAQISHPKIKDTLQTISSSFYVNSQSTNQPNFVIRTKYTNSLKDERIIEKLELERRYWKSTDTPWYILTEKEIPSVILNNIKWLYPAMRESSTEIYNRLNDYIHIFTQYPELDLITLSKKIDQVYNLTIGTSLAELRELLAQRYFIFDITKDYKKIKASEIKLGNFEIWEEIRHVSNQ
>NZ_CP015594.1|WP_067731445.1|2511122_2512961_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGGVAERNISTILIEGLKRLEYRGYDSAGLALVNAEQVLRERRVGKVTNLEQAVNASKITGSLGIAHTRWATHGKPTEANAHPHISGNVAVVHNGIIENYQELKDDLEALGYVFTSQTDTEVVAHLVNHALKSTPSLLEAVKQVVPQLKGAYALGIAHTDHPDELITVREGSPLVIGVGIGENFISSDQLALLPITNRFIYLEEGDIARLTRNSIEVFANGQRVERPIKELDATVSNASKGEYKHYMLKEIYEQPEAIKQTISQALNGNALREDFLASAVTDFSNIQQVQIIACGTSYHAGMIAKYWFEQLIDLPCQVEIASEFRYRTPVIVNNTLYVCISQSGETADTLAALRDTQKRAAAKGLNITTMTICNVATSSMVRETNHSLLTLAGPEIGVASTKAFTTQLAALMLLILKIGQIKHTISEDAIAKIVAELWHTPKVILDTLQNNAEILRLSELFVEKQHCLFLGRGTHFPIALEGALKLKEISYIHAEGYAAGELKHGPLALVDNDMPVVILAPKDDMLDKLKSNMEEVQARGGELFVFADENSGIKAKDRQHVVNVPTVDPVLAPIVYSIPVQLLSYHVAVLRGTDVDQPRNLAKSVTVE
>NZ_CP015594.1|WP_067731444.1|2509745_2511110_+|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSTSVIILAAGKGTRMRSSLPKVLQPLAGRPLLAHVIETTKQLNAENIITIYGHGGDLVQQAFAHEQVQWVEQKEQLGTGHAVKVTLPVLPQTGVSLILSGDVPCIRPATLQRLLDVSTETGIGLVTLTLPDATGYGRIVRKNGEIQAIVEHKDASDEQRQIKEINTGIYCVSNAKLHEWLPRLSNHNAQGEYYLTDIVAMALADGMQVVSVEPEQAFEVDGVNDRVQLAALERQFQTAQAKALMQQGVHLIDPSRFDLRGTLKVGQDVRIDINVIIEGECELGDGVEIGAGCVLKNTKIAAGTKVQPYSVFDSAIVGENTQIGPFARLRPGAKLAAEVHIGNFVEVKNSTIGHGSKANHFTYLGDAEVGSGSNIGAGTITCNYDGANKFKTIIGDRAFIGSNSSLVAPVQIGNGATVGAGSTITRDVAENSLAVERSKQFAKENYQRPQKIKK
>NZ_CP015594.1|WP_067731443.1|2509202_2509724_+|phosphatidylglycerophosphatase-A
MDINILHKPKINFKAMSWPNRLIVFCGVGFGSGLLPKAPGTFGSAFALLFVPIWLAIGFFNSILAIVLMSILGIYICGQTAKVMGVHDDGRIVWDEFAGQSITFLPILYLGQMNVWWVIIGFALFRLFDVWKPWPIRVIDRQVGGGFGIMFDDIVAGIWAAICIAIYLYISMA
>NZ_CP015594.1|WP_067731442.1|2508307_2509225_+|thiamine-phosphate-kinase
MAEFSIIDTYFNRHTSTSVDLGVGDDSAVLTPPPQQQLVICADTLVAGRHFPLDTNPHAIGWKSVAVNLSDIAAMGAKPHSILLALSLPQIDHDWLKGFSQGLYDCCDQFGVRLIGGDTTQSPHLTISVTALGWIDQGQAITRAGAQVGDLICVSGTVGDAAFGLQHRGHELQKRLDYPTPRCELGQHLKGLANSMIDVSDGLAQDLGHILAASKVGAELYLEKLPLSPALQQLPDQQKWHYALAGGDDYELCFTISPDHYKILKQQTPHVNITMIGTINNTNTLSLLHHHDSVVLDLNGYQHFA
>NZ_CP015594.1|WP_067731441.1|2507837_2508287_+|transcription-antitermination-factor-NusB
MSQTLQATYAAKRKARRFAVQGIYEWQMSHNPVHEIEARTRVDNAMHKVDLSYYHELLTEVVANHEALDALLIPVLDRDISALDGVELATLRLGAYELKEHLEIPYRVVLDEAIELAKHFGGADSHKYINGVLDRLATTLRAAEKQQAN
>NZ_CP015594.1|WP_067731451.1|2521260_2522628_+|phosphomannomutase/phosphoglucomutase
MSLTCFKAYDIRGKLGTELNEEIAYKIGRAYGEIYQPKSVVVGCDVRLTSEDLKQATIKGLNDAGVNVLDLGMTGTEEVYFGAFHLDVQGGIEITASHNPMDYNGMKLVRENARPISADTGLKDIQLLAESGKFKEVDSKGTTQKYNILPEFVDHLMTYIDPAKISPLRLVVNAGNGAAGHVIDAIEEKFKTLNIPVEFIKIHHEADGTFPNGIPNPLLVENRDSTRNAVLEYGADMGLAWDGDFDRCFLFDEKGQFIEGYYIVGLLAQAFLLKQSGEKIVHDPRLVWNTFDIVEQFKGEAIQSKSGHSFIKEKMREHNAVYGGEMSAHHYFRDFAYCDSGMIPWLLAVSVLSETQKPLSSLVEEMIEKFPCSGEINFKVADTQVTIQKIFDHFADQHPTIDKTDGVSLDFGAWRLNVRASNTEPLLRLNIESRKDQNPQPIQYYIDQLTHLIQS
>NZ_CP015594.1|WP_067731452.1|2522688_2523708_-|UDP-glucose-4-epimerase-GalE
MTKILVTGGAGYIGSHTCVELLNAGHDVVVIDNLSNSSREALNRVQQLTEKSLDFFEGNILDQNVLDQIFQNHNIDAVIHFAGLKAVGESQQIPLKYFENNIAGSISLVQAMERAKVFNLVFSSSATVYDEANISPLNEEMPTGMPSNNYGYTKLIVEQLLEKISQADERWSIALLRYFNPVGAHKSGQIGEDPQGIPNNLMPYVTQVAVGRREKLSIFGNDYETVDGTGVRDYIHVVDLANAHLCALENRLNAQGCRAWNIGTGKGCSVLEIKNTFEKVNRIEIPFEFAPRRAGDVATTFANNARAVAELGWQPKFGLEDMLADSWNWQKKNPNGYRD
>NZ_CP015594.1|WP_067731453.1|2523700_2525371_-|glucose-6-phosphate-isomerase
MAKGYPYTVENIDDVLARLVELKRKTQSKHLTELFAEDDQRFNNFSVKLEPLVFDYSKHRIDGNVLNNLVHWAQASDLNHWIKKLFSKEDINQSEQRAAMHWALRLPKTTKVHQDIAAQVHQQLERMYQLVEQLHEGQYRGVTGEVIQDVVNIGVGGSDLGPLMVSQALSDFKQQTEKPLNVHFVSTIDGSQLSEILHKLRPETTLFIISSKSFGTIDTLSNAQTARLWLEKSLGQTPQMLKHHFVGVSTKPDKMTEWGIHPEKQLLLWDWVGGRYSLWSCIGFPIALTIGVKGFKHLLAGAHAIDEHFQNAPFEQNIPVLMGLLSAWNSNFLDIQTHAVLPYDGRLKYFAPYLQQLEMESNGKSIQRSGEKVEWTTCPIIWGEVGPNAQHAFYQLLHQGTHAVSCDFIAPIRRYNAKHFTYVDNAAALVQQHHLALSNCLAQSRLLAFGNQALDQNELVGLPKYKQYEGNQPSTTILLEELNPYSLGMLIALYEHKVFVQSVLWNINPFDQWGVEKGKQIANQLLPILSGEETDLSDLDASTQGLLNLFFGKKND
>NZ_CP015594.1|WP_067731454.1|2525373_2526630_-|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MKVAVFGRTLYSGVLAGVLAEYGHQVYWCDVFLKNTSEHIFAQDDAVKNLLIKQERNEFLRYCTLQDVPLDIDTYIYSFNPTEVDVGIELIKEIGLRTIIHPKLMINASTLGLNGTSKLQKYLPEDHWIYLPDIIQEGNAIASITQAEQLIVGCDVPTAQMHIQELLRPLFPRENQYLFMPILDAEFTKLSISGMLATRISYINDLAVVAEKLGIDIEHVRQGMAADSRIGSSYLYPGAGFGGENFSHDILTLANTVSGTGAKSQLLAQVWDINEQQKELLFRKLWNYYHGDLEGKTVAIWGASFKENTVRIQQSPVHTMLKALWAQGVTVRLHDPQALAEIEKVYGHRDDLIYCTDQYEAVQGAHALCLLTAWKQYWSPSYKDLLQSMAHPFILDGRNIYNPNYVKSLGFAYIGVGR
>NZ_CP015594.1|WP_067731455.1|2526640_2527516_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MIKKAILPVAGLGTRFLPASKSIPKEMVTVVDRPAIEYVVREAVAAGIEEIILVTHSSKASIENYFDRSFELETTLENKKKFDLLKEITEILPPNVKVISVRQPQPLGLGHAVLCAKAVVGQEHFAVLLPDVLVKDSDAENDLSLMIKRFEASQASQIMVEAVPQHLVDQYGIVDVAEIPEEGHSIQMRGIVEKPAVEKAPSNLSVVGRYILPAKIMQLLEQTPKGAGNEIQLTDAIAMLQQTEVVEAYRMKGQTFDCGSKLGYLKAVLNYGIDHPKLGEDFKAMIKELAL
>NZ_CP015594.1|WP_067731456.1|2527738_2528380_+|sugar-transferase
MNEQPMTILKPNSRFLKRAFDIIFALFFLIILSPFILILALLIKKDGGPAFYGHERIGQNGIRFKCLKFRSMAVNSQELLQQILNNNPEARQEWETTFKLKNDPRITTIGHFIRKTSLDEIPQLINILKGEMSTVGPRPVTEKELPMYNEDVKYYLMTKPGMTGLWQVSGRSDVDYNTRVKMDTDYVLHWSFIKDIIIILKTVKVVLKKDGAY
>NZ_CP015594.1|WP_067731457.1|2528408_2529209_+|glycosyltransferase
MSVIASIVLYKHLYEELSPTLDSLLNSDEISKIVLVDNDQSDWANKLSNPKIIYLKSEGNYGFGYGHNIAIKKFSHDCQYFLICNPDISFEKSEFTRLIEFAKTQPHIGLFLPRIMKLDGSNQYGARLLPTPMNLFARRFSPKIASYLDDNYLLRKYKIDKPIFAPSLLGCFMLFDSNKLMTLGGFDERFFMYMEDIDLSRRCAEKFGNIYYPFAFVTHLHEQGSYKNPVLLKAHIKSAWQYFNKWGWLIDTKRTHINKNCIKQFE
>NZ_CP015594.1|WP_157883277.1|2529216_2530074_-|rhamnosyltransferase
MTYNPDIENLINLVSSLHQSQLKVIVVDNASSQKISFEKMNDVIVIALKDNLGIAKAQNIGIRKAIEVGCKKIIFFDQDSQIDHDFIKNLISDYEKLKDKGNKVAAIGPQFIDKKLGFYAPGLILRKNGLVKKIDISKIKEPKKVDLIISSGSLIPIEVLQDVGLMNEDFFIDYVDTEWCFRALSKGYKIYVSPRAIMHHSVGDSTIRFMGLTCPVHSAFRRYYRVRNLFLMWNMRHIKKKWIIKMFVHNLIAQILLILTQKNRMAYIKYFIKSIRDGIKEIKRG
>NZ_CP015594.1|WP_067731459.1|2530206_2531376_-|glycosyltransferase-family-4-protein
MKKVIVVFHDNNIKSGATASMLSLIKYWKTHNYFEVEAIIPKDKGSLAGELDKFSINYYIFNYNMVRYHVDNNIGTRALKYLRAFFRVIRDIFTVFNLRGNRIFNNVDYIYSNTSSIYFGFFLSQILCIKHVWHFREFGFEDQNCKHIFSDHFFYKLANKYSDKIIVISRSLEEKIRKYIDGKKIFQVYNGIDSKNIIKKNEISLKNKSPLRLIITGSVIPNKGQEFVIEALYQLKLRNIPFQLGIAGDGKSSYVNYLKEKCNKYNIAESVNFHGFVSNMETILDNYDIAIISSKSEAFGRVTVESMIMGLLIVCSNTGANKELVSDENGYIYMGNSTKSLVDILEYIYFQDEIFKLDKIKKSMEVSNKFTVDLCAKSIYRILIDCHSN
>NZ_CP015594.1|WP_067731460.1|2531376_2531934_-|dTDP-4-dehydrorhamnose-3,5-epimerase
MNVIETKIKDLLIFEPRVFGDDRGWFMESFNQQAFEKILKDRSLDIPQFVQDNHSFSKKGVLRGLHYQLNPHAQGKLVRVVQGRAWDVAVDIRKESETFGQWVGVELSGENHKQFWIPAGFAHGFVALEDNTQFLYKTTDYYSKECERSIVWNDPDIAIEWPILNEIELLLTEKDKMAKSLKEVD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

40115 : 114012

Enterobacteria_phage(19.05%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067727861.1\|40115_41420_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.6e-96	51.9
WP_067727863.1\|41478_41877_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	7.8e-31	50.4
WP_067727864.1\|42360_43827_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	3.6e-89	39.6
WP_067727866.1\|43947_45279_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_067727868.1\|45293_45950_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_067727870.1\|45950_47651_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.3e-70	32.0
WP_067727872.1\|47698_48451_-	putative porin	NA	NA	NA	NA
WP_067727874.1\|48620_49403_-	putative porin	NA	NA	NA	NA
WP_101494804.1\|49951_51046_+	peptide chain release factor 2	NA	NA	NA	NA
WP_067727876.1\|51194_51494_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_067727877.1\|51515_52580_+	alkene reductase	NA	NA	NA	NA
WP_171255075.1\|52675_53956_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
WP_067727879.1\|54151_54865_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_067727880.1\|54838_55816_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_067727881.1\|56111_58055_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.4e-93	41.1
WP_067727882.1\|58192_59374_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_067727883.1\|60236_60635_-\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	3.2e-32	51.2
WP_067727884.1\|60693_61998_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	4.6e-96	51.9
WP_067727888.1\|61994_62711_-	deoxyribodipyrimidine photo-lyase	NA	NA	NA	NA
WP_067727890.1\|62857_63472_-	riboflavin synthase	NA	NA	NA	NA
WP_067727892.1\|63613_64717_-	dimethyl sulfone monooxygenase SfnG	NA	NA	NA	NA
WP_067727893.1\|64746_65481_-	FMN reductase	NA	NA	NA	NA
WP_067731625.1\|65852_66503_+	response regulator transcription factor	NA	NA	NA	NA
WP_067727894.1\|66576_67341_-	hypothetical protein	NA	NA	NA	NA
WP_067727895.1\|67745_71237_-	hybrid sensor histidine kinase/response regulator	A0A2K9L0Z8	Tupanvirus	4.5e-13	26.7
WP_067727896.1\|71419_71752_+	DUF485 domain-containing protein	NA	NA	NA	NA
WP_067727898.1\|71753_73469_+	cation acetate symporter	NA	NA	NA	NA
WP_067727900.1\|73593_74283_+	ion channel	NA	NA	NA	NA
WP_067727902.1\|74339_75221_-	porin Omp33-36	NA	NA	NA	NA
WP_067727904.1\|76329_78042_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	8.6e-18	35.4
WP_067727907.1\|78099_79857_+	KAP family P-loop domain protein	NA	NA	NA	NA
WP_067727909.1\|79885_82717_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.4e-310	56.1
WP_157883244.1\|82929_83088_+	hypothetical protein	NA	NA	NA	NA
WP_157883245.1\|83109_83280_+	hypothetical protein	NA	NA	NA	NA
WP_067727910.1\|83523_84606_+	DUF475 domain-containing protein	A0A172Q0Y5	Acinetobacter_phage	5.5e-87	51.2
WP_067727911.1\|84761_86126_+	MFS transporter	NA	NA	NA	NA
WP_067727912.1\|86177_86753_+	single-stranded DNA-binding protein	M4SRQ0	Psychrobacter_phage	1.8e-36	63.2
WP_067727914.1\|86964_87528_+	alkyl hydroperoxide reductase subunit C	NA	NA	NA	NA
WP_067727916.1\|87586_88510_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_067731626.1\|89356_91018_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.1e-170	54.9
WP_067727917.1\|93047_93383_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_067727918.1\|93379_93763_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_067727919.1\|93966_94842_+	pirin family protein	NA	NA	NA	NA
WP_067727921.1\|95230_96538_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_067727922.1\|96539_97388_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_067727924.1\|97702_97930_-	hypothetical protein	NA	NA	NA	NA
WP_067727925.1\|98153_98873_-	hypothetical protein	NA	NA	NA	NA
WP_067727926.1\|99337_101218_+	potassium transporter Kup	A7K9V6	Acanthocystis_turfacea_chlorella_virus	3.9e-72	33.7
WP_157883246.1\|102150_103062_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_067727928.1\|103109_104075_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_081408487.1\|104157_105183_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.0e-26	30.4
WP_157883247.1\|105262_106597_+	hypothetical protein	NA	NA	NA	NA
WP_081408541.1\|106961_107288_+	hypothetical protein	NA	NA	NA	NA
WP_157883248.1\|107293_107845_+	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	4.6e-05	29.2
WP_067727935.1\|107866_108073_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_067727941.1\|108393_109158_+\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.7e-13	35.8
WP_067727943.1\|109159_109504_+	hypothetical protein	NA	NA	NA	NA
WP_101494806.1\|109585_110745_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.4e-48	38.4
WP_081408488.1\|110929_111862_+\|transposase	IS5-like element IS17 family transposase	Q1MVF0	Enterobacteria_phage	2.3e-57	40.5
WP_067727863.1\|112250_112649_-\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	7.8e-31	50.4
WP_067727950.1\|112707_114012_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.2e-96	52.2

DBSCAN-SWA_2

601624 : 726232

101

Shigella_phage(10.53%)

protease,integrase,transposase,tRNA

attL 596676:596693|attR 613758:613775

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
596676:596693	attL	NA	NA	NA	NA
WP_067728736.1\|601624_602794_-\|integrase	site-specific integrase	G3EN73	Psychrobacter_phage	8.2e-129	58.5
WP_067728738.1\|603311_603914_-	HAD family hydrolase	NA	NA	NA	NA
WP_099337213.1\|604190_605328_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.5e-84	59.0
WP_067728742.1\|605342_606011_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_067728744.1\|606454_607756_+	MHS family MFS transporter	NA	NA	NA	NA
WP_067728746.1\|608109_609108_+	DUF1852 family protein	NA	NA	NA	NA
WP_005267229.1\|609150_610179_+	methionine synthase	NA	NA	NA	NA
WP_067728749.1\|611601_612333_-	Fic family protein	A0A1V0E025	Clostridioides_phage	9.7e-11	29.4
WP_157883253.1\|612709_616459_+	ATP-binding protein	NA	NA	NA	NA
613758:613775	attR	NA	NA	NA	NA
WP_153370889.1\|616455_617094_+	hypothetical protein	NA	NA	NA	NA
WP_067728755.1\|617090_618323_+	hypothetical protein	NA	NA	NA	NA
WP_067728757.1\|618319_619180_+	DUF2399 domain-containing protein	NA	NA	NA	NA
WP_101494812.1\|619633_620709_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.8e-45	39.6
WP_067728761.1\|620965_621391_+	homoprotocatechuate degradation operon regulator HpaR	NA	NA	NA	NA
WP_067728763.1\|621377_622580_-	MFS transporter	NA	NA	NA	NA
WP_157883254.1\|622908_623526_+	hypothetical protein	NA	NA	NA	NA
WP_067728767.1\|623576_624764_-	Bcr/CflA family multidrug efflux MFS transporter	S4TR35	Salmonella_phage	3.4e-21	26.5
WP_067728769.1\|624767_625658_-	4-hydroxyphenylacetate catabolism regulatory protein HpaA	NA	NA	NA	NA
WP_067728772.1\|625807_626467_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_067728775.1\|626470_627232_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_067731648.1\|627251_628712_+	5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase	NA	NA	NA	NA
WP_067728777.1\|628757_629606_+	3,4-dihydroxyphenylacetate 2,3-dioxygenase	NA	NA	NA	NA
WP_067728779.1\|629622_630012_+	5-carboxymethyl-2-hydroxymuconate Delta-isomerase	NA	NA	NA	NA
WP_067728783.1\|630026_630830_+	2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA	NA	NA	NA
WP_067728785.1\|630840_631644_+	4-hydroxy-2-oxoheptanedioate aldolase	NA	NA	NA	NA
WP_067728787.1\|631655_633104_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_157883255.1\|633621_633786_+	hypothetical protein	NA	NA	NA	NA
WP_067728789.1\|633907_635284_+	MHS family MFS transporter	Q6JIH2	Burkholderia_virus	4.0e-42	30.3
WP_101494813.1\|635337_636560_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_081408500.1\|637414_638680_+	flavin-dependent monooxygenase	NA	NA	NA	NA
WP_067728791.1\|638698_639637_+	flavin reductase family protein	NA	NA	NA	NA
WP_067728793.1\|639795_641544_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_067728795.1\|641640_642393_+	glucose 1-dehydrogenase	A0A0M4JSW6	Mollivirus	9.3e-09	31.9
WP_067728797.1\|642426_643167_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_067728799.1\|643159_643930_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_067728802.1\|644066_645419_+	MFS transporter	NA	NA	NA	NA
WP_067728804.1\|645673_647020_+	outer membrane porin, OprD family	NA	NA	NA	NA
WP_067728806.1\|647074_647503_+	homoprotocatechuate degradation operon regulator HpaR	NA	NA	NA	NA
WP_067728810.1\|647576_647771_-	hypothetical protein	NA	NA	NA	NA
WP_067728812.1\|648260_649454_+	peptide antibiotic transporter SbmA	NA	NA	NA	NA
WP_171255044.1\|650096_651074_+	hypothetical protein	NA	NA	NA	NA
WP_067728814.1\|651214_651730_+	hypothetical protein	NA	NA	NA	NA
WP_067728820.1\|652354_653374_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-79	46.4
WP_067728822.1\|653373_654147_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.0e-74	56.2
WP_067728827.1\|655473_656697_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.7e-50	48.7
WP_067728829.1\|656828_658310_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_067728831.1\|658309_659788_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_067728833.1\|659840_660155_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_067731652.1\|660289_661336_+	rod shape-determining protein	NA	NA	NA	NA
WP_067728835.1\|661352_662210_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_067728837.1\|662196_662688_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_067728839.1\|662675_663242_+	Maf-like protein	NA	NA	NA	NA
WP_067728841.1\|663289_664744_+	ribonuclease G	NA	NA	NA	NA
WP_171255045.1\|664881_665055_+	hypothetical protein	NA	NA	NA	NA
WP_067728843.1\|665202_666585_-	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA
WP_067728845.1\|666757_667489_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_067728847.1\|667689_668307_+	bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH	NA	NA	NA	NA
WP_067728849.1\|668388_669798_-	outer membrane protein transport protein	NA	NA	NA	NA
WP_067728851.1\|670241_671393_-	transporter	NA	NA	NA	NA
WP_081408502.1\|671727_672660_+\|transposase	IS5-like element IS17 family transposase	Q1MVF0	Enterobacteria_phage	6.1e-58	40.9
WP_067728853.1\|672762_673992_-	outer membrane protein transport protein	NA	NA	NA	NA
WP_067728855.1\|674470_675826_-	amino acid permease	NA	NA	NA	NA
WP_067728858.1\|676155_677355_+	2-methylaconitate cis-trans isomerase PrpF	NA	NA	NA	NA
WP_035337399.1\|677423_678293_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_067728860.1\|678527_679439_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_067728862.1\|679493_680984_-	sodium/proline symporter PutP	NA	NA	NA	NA
WP_067728864.1\|681202_682057_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_067728866.1\|682060_682543_-	NfeD family protein	NA	NA	NA	NA
WP_067728868.1\|682721_683354_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_067728870.1\|683485_684715_+	MFS transporter	NA	NA	NA	NA
WP_067728872.1\|684862_685972_+	porin	NA	NA	NA	NA
WP_067728874.1\|686027_686858_-	hypothetical protein	NA	NA	NA	NA
WP_067728876.1\|687168_687870_+	HAD family hydrolase	NA	NA	NA	NA
WP_067728878.1\|688039_689671_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.0e-20	39.1
WP_067728880.1\|691793_692825_+	molecular chaperone DnaJ	NA	NA	NA	NA
WP_067728882.1\|692918_694103_+	molecular chaperone DnaJ	NA	NA	NA	NA
WP_067728827.1\|694192_695416_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.7e-50	48.7
WP_081408503.1\|695538_695700_+	DUF559 domain-containing protein	NA	NA	NA	NA
WP_067727941.1\|696001_696766_-\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.7e-13	35.8
WP_067728884.1\|697953_700848_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	5.5e-142	35.9
WP_067728886.1\|701037_701706_+	hypothetical protein	NA	NA	NA	NA
WP_067728888.1\|701734_702532_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_081408504.1\|702541_703633_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.1e-23	39.2
WP_067728892.1\|703931_705212_+	glutaminase	NA	NA	NA	NA
WP_157883256.1\|705217_705367_+	hypothetical protein	NA	NA	NA	NA
WP_067728894.1\|705424_705649_+	hypothetical protein	NA	NA	NA	NA
WP_067728896.1\|705708_707439_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_067728898.1\|707699_708062_+	DUF559 domain-containing protein	NA	NA	NA	NA
WP_101494814.1\|708226_709386_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	9.2e-48	38.2
WP_067731653.1\|709502_709796_+	hypothetical protein	NA	NA	NA	NA
WP_067728904.1\|709792_710689_+	nucleotide-binding protein	NA	NA	NA	NA
WP_067728906.1\|710839_714526_-	methionine synthase	A0A140XBC7	Dickeya_phage	1.6e-13	60.0
WP_171255083.1\|715086_716610_+	inorganic phosphate transporter	NA	NA	NA	NA
WP_067728910.1\|716851_718393_-	hypothetical protein	NA	NA	NA	NA
WP_067728912.1\|718541_719477_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_067728914.1\|719582_720200_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_067728916.1\|720358_720997_+	Fe-S biogenesis protein NfuA	NA	NA	NA	NA
WP_067728918.1\|721168_723208_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	3.0e-17	34.6
WP_067728920.1\|723251_724256_-	hypothetical protein	NA	NA	NA	NA
WP_081408545.1\|724270_725305_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_101494815.1\|725418_726232_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

883103 : 890101

Acinetobacter_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067731662.1\|883103_884495_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	4.1e-18	36.7
WP_067729182.1\|884500_885049_-	DUF4385 domain-containing protein	A0A1D8KJK0	Synechococcus_phage	7.5e-32	49.4
WP_067729184.1\|885111_885438_-	hypothetical protein	NA	NA	NA	NA
WP_067729186.1\|885684_886044_-	DUF861 domain-containing protein	NA	NA	NA	NA
WP_171255049.1\|886132_886681_-	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	7.6e-93	95.1
WP_101494817.1\|886776_887466_-	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	4.6e-79	67.2
WP_067729192.1\|887638_888445_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.2e-115	79.7
WP_067729194.1\|888461_889508_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	2.5e-153	81.6
WP_171255086.1\|889525_890101_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.3e-103	93.2

DBSCAN-SWA_4

1103664 : 1152676

Serratia_phage(14.29%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101494815.1\|1103664_1104477_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_067729530.1\|1104503_1106378_+	hypothetical protein	NA	NA	NA	NA
WP_067729532.1\|1106456_1107011_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_067729534.1\|1107185_1107620_+	PH domain-containing protein	A0A249Y2R5	Serratia_phage	1.2e-21	43.8
WP_067729536.1\|1107663_1108887_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.1e-50	49.2
WP_067729538.1\|1109012_1110296_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_067729541.1\|1110487_1112062_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	9.2e-67	47.3
WP_001086304.1\|1112159_1112429_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_067729545.1\|1112829_1113705_-	DUF3426 domain-containing protein	NA	NA	NA	NA
WP_067729547.1\|1113723_1114626_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_067729549.1\|1114738_1115644_-	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_067729551.1\|1115735_1116626_-	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_067731675.1\|1116754_1117099_-	hypothetical protein	NA	NA	NA	NA
WP_067729553.1\|1117345_1119226_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_067729555.1\|1119535_1120729_+	3-(3-hydroxy-phenyl)propionate transporter MhpT	NA	NA	NA	NA
WP_067731676.1\|1120841_1121168_+	hypothetical protein	NA	NA	NA	NA
WP_067729557.1\|1121213_1122689_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA
WP_067729558.1\|1122675_1123785_-	PAS domain-containing protein	NA	NA	NA	NA
WP_067729561.1\|1124136_1125480_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_067729563.1\|1125523_1126252_+	UMP kinase	NA	NA	NA	NA
WP_067729566.1\|1126330_1126885_+	ribosome recycling factor	NA	NA	NA	NA
WP_067729569.1\|1126892_1127645_+	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	1.3e-21	41.5
WP_067729572.1\|1127648_1128473_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_067729574.1\|1128473_1129670_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_067729576.1\|1129673_1131029_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_067729578.1\|1131069_1133526_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_067729580.1\|1133598_1134096_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_067729581.1\|1134099_1135170_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_171255092.1\|1135174_1135660_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_067729585.1\|1135656_1136445_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_067729588.1\|1138002_1138617_-	regulatory protein RecX	NA	NA	NA	NA
WP_067729590.1\|1138705_1139746_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	1.1e-113	62.2
WP_067729592.1\|1139890_1140331_-	RNA-binding protein	NA	NA	NA	NA
WP_067729594.1\|1140323_1141010_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_067729596.1\|1141022_1141871_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_067731677.1\|1141933_1142683_+	phosphoglycerate mutase family protein	NA	NA	NA	NA
WP_171255054.1\|1142794_1142935_+	hypothetical protein	NA	NA	NA	NA
WP_067729598.1\|1143040_1143307_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_067729600.1\|1143520_1144183_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_067729602.1\|1144198_1144711_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_067729604.1\|1144790_1145567_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_067729606.1\|1145717_1146020_+	response regulator	NA	NA	NA	NA
WP_101494820.1\|1146072_1146360_-\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	2.3e-24	55.3
WP_067729609.1\|1146515_1147820_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.6e-96	51.9
WP_081408514.1\|1147872_1148265_+	response regulator transcription factor	NA	NA	NA	NA
WP_067729613.1\|1150191_1151361_-	cupin domain-containing protein	NA	NA	NA	NA
WP_067729615.1\|1151806_1152676_+\|transposase	IS982 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1981788 : 2037018

Enterobacteria_phage(40.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081408502.1\|1981788_1982721_+\|transposase	IS5-like element IS17 family transposase	Q1MVF0	Enterobacteria_phage	6.1e-58	40.9
WP_067731015.1\|1982750_1983167_-	hypothetical protein	NA	NA	NA	NA
WP_067731017.1\|1983544_1986148_-	Fe/S-dependent 2-methylisocitrate dehydratase AcnD	NA	NA	NA	NA
WP_067731018.1\|1986406_1987129_+	aminomethyltransferase	NA	NA	NA	NA
WP_067731019.1\|1987198_1987732_+	hypothetical protein	NA	NA	NA	NA
WP_067731020.1\|1987762_1988014_-	hypothetical protein	NA	NA	NA	NA
WP_067731021.1\|1988266_1989091_+	sel1 repeat family protein	NA	NA	NA	NA
WP_067731022.1\|1989149_1990085_-	AEC family transporter	NA	NA	NA	NA
WP_067731023.1\|1990132_1991248_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_067731024.1\|1991339_1992626_-	carbohydrate porin	NA	NA	NA	NA
WP_067731025.1\|1992964_1993816_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	5.0e-27	31.9
WP_067731719.1\|1993818_1994103_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_067728078.1\|1994155_1995460_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_067731026.1\|1995627_1996062_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_067731027.1\|1996237_1998073_-	translational GTPase TypA	NA	NA	NA	NA
WP_067731028.1\|1998246_1999617_+	uracil-xanthine permease	H9YQ34	environmental_Halophage	3.8e-24	48.1
WP_067731029.1\|1999683_2000718_+	methyltransferase	NA	NA	NA	NA
WP_067731030.1\|2000717_2002181_+	amino acid permease	NA	NA	NA	NA
WP_067731031.1\|2002218_2002755_-	peptidase C39	NA	NA	NA	NA
WP_067731032.1\|2002856_2003900_-	OmpA family protein	NA	NA	NA	NA
WP_067731033.1\|2004273_2004795_+	type II transport protein GspH	NA	NA	NA	NA
WP_067731034.1\|2004903_2006079_+	thiolase family protein	NA	NA	NA	NA
WP_171255104.1\|2006262_2006727_-	DUF934 domain-containing protein	NA	NA	NA	NA
WP_067731036.1\|2006740_2008384_-	nitrite/sulfite reductase	NA	NA	NA	NA
WP_067731037.1\|2008620_2009742_-	CoA transferase	NA	NA	NA	NA
WP_067731038.1\|2009925_2010966_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_067731039.1\|2011126_2012332_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_067731040.1\|2012343_2014476_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_067731041.1\|2014636_2014912_+	hypothetical protein	NA	NA	NA	NA
WP_067731042.1\|2014961_2015405_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_067731043.1\|2015398_2016616_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_067731044.1\|2016717_2017359_+	hemolysin III family protein	NA	NA	NA	NA
WP_067731045.1\|2017501_2018815_+	MHS family MFS transporter	NA	NA	NA	NA
WP_067731046.1\|2018962_2019598_+	hypothetical protein	NA	NA	NA	NA
WP_067731047.1\|2020698_2022330_+	phospholipase D family protein	NA	NA	NA	NA
WP_067731048.1\|2022350_2023160_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_067731049.1\|2023552_2024884_+	GTPase HflX	NA	NA	NA	NA
WP_067731050.1\|2024925_2025297_+	hypothetical protein	NA	NA	NA	NA
WP_067731051.1\|2025307_2025982_+	LrgB family protein	NA	NA	NA	NA
WP_067731052.1\|2026464_2026908_+	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_067731053.1\|2026957_2027407_+	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_067731054.1\|2027472_2028321_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA
WP_067731055.1\|2028321_2029134_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_171255066.1\|2029166_2030141_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_004811299.1\|2030426_2030855_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_067731057.1\|2030867_2031254_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_101494813.1\|2031359_2032581_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_067731058.1\|2032858_2033512_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_067731059.1\|2033521_2033950_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	6.7e-28	47.0
WP_067731060.1\|2033966_2034614_+	hypothetical protein	NA	NA	NA	NA
WP_000743272.1\|2034723_2035656_-\|transposase	IS5-like element IS17 family transposase	Q1MVF0	Enterobacteria_phage	4.6e-58	40.9
WP_067731061.1\|2036055_2037018_+\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2249832 : 2297687

Pseudomonas_phage(30.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067731241.1\|2249832_2250738_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_067731242.1\|2250895_2251921_+	lipase secretion chaperone	NA	NA	NA	NA
WP_067731243.1\|2252299_2253310_+	triacylglycerol lipase	NA	NA	NA	NA
WP_067731244.1\|2253392_2254355_+	triacylglycerol lipase	NA	NA	NA	NA
WP_067731245.1\|2254507_2255476_+	triacylglycerol lipase	NA	NA	NA	NA
WP_067731246.1\|2255561_2256509_+	triacylglycerol lipase	NA	NA	NA	NA
WP_067731247.1\|2256591_2256975_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_067728626.1\|2256971_2257307_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_067731731.1\|2259336_2260998_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.5e-171	55.1
WP_067731248.1\|2261458_2261833_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_067731249.1\|2262005_2262755_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_067731250.1\|2262781_2263330_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_004826436.1\|2263348_2263606_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_067731251.1\|2263974_2265279_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	4.6e-96	51.9
WP_067727883.1\|2265337_2265736_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	3.2e-32	51.2
WP_081408533.1\|2265783_2266074_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_101494826.1\|2266067_2266532_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_067731254.1\|2267377_2268364_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_067731732.1\|2268496_2268958_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_067731255.1\|2269116_2270067_-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA
WP_067731256.1\|2270199_2270823_+	guanylate kinase	A0A240FAU9	Liberibacter_phage	3.6e-14	32.9
WP_067731257.1\|2270897_2271179_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_067731258.1\|2271394_2273497_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	J9Q7H7	Salmonella_phage	4.5e-08	33.1
WP_067731259.1\|2273572_2273956_+	RidA family protein	NA	NA	NA	NA
WP_171255110.1\|2274159_2274342_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_067731261.1\|2274562_2275027_+	bacterioferritin	NA	NA	NA	NA
WP_067731262.1\|2275078_2276713_-	O-antigen ligase family protein	NA	NA	NA	NA
WP_067731263.1\|2278115_2278817_-	type IV pilin accessory protein	NA	NA	NA	NA
WP_101494812.1\|2278995_2280070_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.8e-45	39.6
WP_067731264.1\|2280080_2280647_-	pilin	NA	NA	NA	NA
WP_067731265.1\|2280928_2282830_+	acyltransferase	B5WZU0	Pseudomonas_phage	6.8e-40	39.3
WP_001055589.1\|2283028_2283412_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_067731266.1\|2283408_2283744_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_067731626.1\|2285794_2287456_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.1e-170	54.9
WP_067731267.1\|2288089_2288521_+	pilin	NA	NA	NA	NA
WP_081408534.1\|2288679_2289612_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.6e-58	41.2
WP_067731268.1\|2289683_2290043_+	hypothetical protein	NA	NA	NA	NA
WP_067731269.1\|2290215_2291352_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_157883276.1\|2291336_2292443_+	glycosyltransferase	NA	NA	NA	NA
WP_067731271.1\|2292423_2293710_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_081408535.1\|2293696_2295058_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_067731273.1\|2295057_2295969_-	LicD family protein	A0A1V0SAS8	Catovirus	3.8e-12	40.2
WP_067731274.1\|2295958_2296579_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_067729673.1\|2296724_2297687_+\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2334715 : 2399179

Enterobacteria_phage(18.18%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101494813.1\|2334715_2335938_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_067731736.1\|2336033_2337053_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_067731302.1\|2337301_2338303_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_067731303.1\|2338692_2338995_+	hypothetical protein	NA	NA	NA	NA
WP_067731304.1\|2339110_2340619_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_067731305.1\|2340948_2341290_+	hypothetical protein	NA	NA	NA	NA
WP_067731306.1\|2341354_2343016_-	energy-dependent translational throttle protein EttA	A0A1B0RXA0	Streptococcus_phage	1.6e-40	28.1
WP_067731307.1\|2343325_2344603_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	8.1e-13	25.9
WP_067731308.1\|2344883_2345771_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_067731737.1\|2345962_2346745_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA
WP_067731738.1\|2346759_2348262_+	DEAD/DEAH box helicase	A0A075DXT4	Acinetobacter_phage	1.1e-80	36.9
WP_067731309.1\|2348327_2349632_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.0e-95	51.4
WP_067727883.1\|2349690_2350089_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	3.2e-32	51.2
WP_067731310.1\|2350175_2351558_+	AAA family ATPase	NA	NA	NA	NA
WP_067731311.1\|2351953_2354791_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
WP_067731312.1\|2354795_2355158_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA
WP_067731313.1\|2355157_2356966_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
WP_067731314.1\|2356965_2357481_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA
WP_067731315.1\|2357477_2357753_+	monovalent cation/H+ antiporter subunit F	NA	NA	NA	NA
WP_067731316.1\|2357764_2358163_+	Na+/H+ antiporter subunit G	NA	NA	NA	NA
WP_054580942.1\|2358222_2358627_-	ribosome-binding factor A	NA	NA	NA	NA
WP_067731317.1\|2358626_2361332_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.4e-25	24.4
WP_067731318.1\|2361342_2362827_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_067731319.1\|2362862_2363387_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_067731320.1\|2364342_2364672_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_067731321.1\|2364685_2365477_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_067731322.1\|2365761_2367471_+	type IV-A pilus assembly ATPase PilB	NA	NA	NA	NA
WP_067731323.1\|2367504_2368734_+	type II secretion system F family protein	NA	NA	NA	NA
WP_067731324.1\|2368733_2369594_+	prepilin peptidase	NA	NA	NA	NA
WP_067731325.1\|2369595_2370192_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_081408536.1\|2370210_2371131_-	DMT family transporter	NA	NA	NA	NA
WP_067731326.1\|2371164_2371914_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_067731327.1\|2372054_2372378_-	pyrimidine/purine nucleoside phosphorylase	NA	NA	NA	NA
WP_067731328.1\|2372791_2374453_+	DNA repair protein RecN	NA	NA	NA	NA
WP_067731329.1\|2374569_2375124_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_067731330.1\|2375116_2375560_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_067731331.1\|2375614_2376616_-	HlyD family secretion protein	NA	NA	NA	NA
WP_067731332.1\|2376654_2376849_-	DUF1656 domain-containing protein	NA	NA	NA	NA
WP_067731333.1\|2376836_2378924_-	FUSC family protein	NA	NA	NA	NA
WP_067731334.1\|2379365_2380148_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_067731335.1\|2380148_2380775_-	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A1X6WG33	Pacmanvirus	4.4e-20	41.8
WP_067731336.1\|2380927_2382730_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-38	26.0
WP_171255112.1\|2382956_2383658_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_067731338.1\|2383764_2385096_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_067731339.1\|2385452_2386484_+	hypothetical protein	NA	NA	NA	NA
WP_081408506.1\|2386570_2387599_+\|transposase	transposase	NA	NA	NA	NA
WP_067731340.1\|2387734_2388370_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_067731341.1\|2388366_2389176_+	metallophosphoesterase	NA	NA	NA	NA
WP_067731342.1\|2389387_2389915_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA
WP_171255071.1\|2389917_2390835_+\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_067731344.1\|2390883_2391144_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_067731345.1\|2391132_2392329_-	putative lipid II flippase FtsW	NA	NA	NA	NA
WP_067731346.1\|2392349_2393696_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_067731347.1\|2393857_2394109_-	hypothetical protein	NA	NA	NA	NA
WP_067731348.1\|2394143_2396000_-	ferrous iron transporter B	NA	NA	NA	NA
WP_067731740.1\|2395996_2396254_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_067731349.1\|2396430_2397348_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	1.3e-33	33.0
WP_067727884.1\|2397417_2398722_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	4.6e-96	51.9
WP_067727883.1\|2398780_2399179_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	3.2e-32	51.2

DBSCAN-SWA_8

2494378 : 2544423

Bacillus_phage(20.0%)

integrase,transposase

attL 2490904:2490920|attR 2527872:2527888

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2490904:2490920	attL	NA	NA	NA	NA
WP_101494815.1\|2494378_2495191_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_081408554.1\|2495284_2495992_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.1e-19	31.6
WP_067731428.1\|2496117_2497686_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	5.3e-22	31.2
WP_067731429.1\|2497862_2498231_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_067731430.1\|2498373_2498793_-	DoxX family protein	NA	NA	NA	NA
WP_067731431.1\|2498983_2499622_+	DedA family protein	NA	NA	NA	NA
WP_067731432.1\|2499632_2500226_-	LysE family transporter	NA	NA	NA	NA
WP_067731433.1\|2500397_2500787_-	hypothetical protein	NA	NA	NA	NA
WP_067731434.1\|2500802_2501639_-	ParA family protein	NA	NA	NA	NA
WP_067731435.1\|2501706_2502099_-	SirB2 family protein	NA	NA	NA	NA
WP_067731436.1\|2502108_2502417_-	BolA family transcriptional regulator	NA	NA	NA	NA
WP_067731437.1\|2502977_2503940_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_067731438.1\|2504311_2505823_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_067731439.1\|2506229_2507351_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	5.2e-56	36.2
WP_067731440.1\|2507362_2507833_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	8.9e-34	52.7
WP_067731441.1\|2507837_2508287_+	transcription antitermination factor NusB	NA	NA	NA	NA
WP_067731442.1\|2508307_2509225_+	thiamine-phosphate kinase	NA	NA	NA	NA
WP_067731443.1\|2509202_2509724_+	phosphatidylglycerophosphatase A	NA	NA	NA	NA
WP_067731444.1\|2509745_2511110_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	5.4e-31	33.9
WP_067731445.1\|2511122_2512961_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7J689	Paramecium_bursaria_Chlorella_virus	4.9e-128	45.0
WP_067731446.1\|2513114_2513918_+\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_067731447.1\|2513901_2516064_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_067731448.1\|2516097_2517780_+	AAA family ATPase	NA	NA	NA	NA
WP_067731449.1\|2517782_2519315_+	TniQ family protein	NA	NA	NA	NA
WP_067731450.1\|2519426_2521025_+	hypothetical protein	NA	NA	NA	NA
WP_067731451.1\|2521260_2522628_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	2.5e-28	25.8
WP_067731452.1\|2522688_2523708_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.0e-82	45.5
WP_067731453.1\|2523700_2525371_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_067731454.1\|2525373_2526630_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	NA	NA	NA
WP_067731455.1\|2526640_2527516_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	2.5e-61	47.6
WP_067731456.1\|2527738_2528380_+	sugar transferase	NA	NA	NA	NA
2527872:2527888	attR	NA	NA	NA	NA
WP_067731457.1\|2528408_2529209_+	glycosyltransferase	NA	NA	NA	NA
WP_157883277.1\|2529216_2530074_-	rhamnosyltransferase	NA	NA	NA	NA
WP_067731459.1\|2530206_2531376_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_067731460.1\|2531376_2531934_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.3e-49	54.9
WP_067731461.1\|2531995_2532895_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	1.7e-110	66.9
WP_067731462.1\|2532896_2533802_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_067731463.1\|2533816_2534887_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.8e-98	51.9
WP_067731464.1\|2535094_2536147_-	EpsG family protein	NA	NA	NA	NA
WP_067731465.1\|2536315_2537290_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	7.3e-06	37.8
WP_067731466.1\|2537286_2538414_-	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_067731467.1\|2538421_2539756_-	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain	NA	NA	NA	NA
WP_067731468.1\|2539752_2541279_-	hypothetical protein	NA	NA	NA	NA
WP_067731469.1\|2541324_2542491_-	nucleotide sugar dehydrogenase	O41091	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.2
WP_067731470.1\|2542793_2543726_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9
WP_067731471.1\|2543786_2544182_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_067731472.1\|2544129_2544423_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP015595

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

26573 : 88411

Erysipelothrix_phage(18.75%)

integrase,transposase

attL 25241:25256|attR 94143:94158

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
25241:25256	attL	NA	NA	NA	NA
WP_067731778.1\|26573_30029_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_067731779.1\|30110_30692_+	class I SAM-dependent methyltransferase	A0A2H4J5G6	uncultured_Caudovirales_phage	7.2e-25	65.4
WP_067731780.1\|30714_31740_+	HNH endonuclease	NA	NA	NA	NA
WP_067731781.1\|31880_35159_+	DEAD/DEAH box helicase family protein	A0A2K5B2B9	Erysipelothrix_phage	1.3e-240	43.1
WP_067731782.1\|35155_35830_+	DUF4391 domain-containing protein	NA	NA	NA	NA
WP_067732175.1\|35996_37850_+	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	2.5e-119	39.2
WP_067731783.1\|37865_41057_+	DEAD/DEAH box helicase family protein	A0A2K5B2C2	Erysipelothrix_phage	4.2e-127	31.6
WP_067731784.1\|41156_44069_+	AAA family ATPase	K4I1H4	Acidithiobacillus_phage	1.4e-31	45.0
WP_067731785.1\|44081_45365_+	McrC family protein	NA	NA	NA	NA
WP_067731786.1\|45448_46321_-	hypothetical protein	NA	NA	NA	NA
WP_067731787.1\|46423_47404_+	hypothetical protein	NA	NA	NA	NA
WP_067731788.1\|47963_48347_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_067732182.1\|48368_49118_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	7.1e-33	35.7
WP_067731789.1\|49110_50670_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.7e-68	33.2
WP_067731790.1\|50844_51039_-	DNA-binding protein	NA	NA	NA	NA
WP_067731791.1\|51147_51636_-	hypothetical protein	NA	NA	NA	NA
WP_067732184.1\|51726_51933_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_067731792.1\|52031_58271_+	hypothetical protein	NA	NA	NA	NA
WP_067731793.1\|58260_58950_+	hypothetical protein	NA	NA	NA	NA
WP_101494814.1\|59129_60289_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	9.2e-48	38.2
WP_081408557.1\|60320_60947_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_067731794.1\|61031_62834_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-30	26.4
WP_067731795.1\|62896_63397_-	hypothetical protein	NA	NA	NA	NA
WP_067731796.1\|63410_64475_-	amidohydrolase family protein	NA	NA	NA	NA
WP_067731797.1\|64485_65598_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_067731798.1\|65597_66794_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.6e-23	40.3
WP_067731799.1\|66790_68593_-	iron ABC transporter permease	NA	NA	NA	NA
WP_067731800.1\|68605_71062_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	2.6e-15	36.7
WP_067731801.1\|71410_72220_+	energy transducer TonB	NA	NA	NA	NA
WP_067731802.1\|72224_72959_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_067731803.1\|72958_73366_+	biopolymer transporter ExbD	NA	NA	NA	NA
WP_067731804.1\|73565_74975_+	methylenetetrahydrofolate reductase C-terminal domain-containing protein	NA	NA	NA	NA
WP_067731805.1\|75121_75520_-\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	2.4e-32	51.2
WP_067731806.1\|75578_76883_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	7.8e-96	51.6
WP_157883284.1\|77097_78102_-	alpha/beta fold hydrolase	A2RQC8	Archaeal_BJ1_virus	3.1e-15	27.9
WP_067731808.1\|78197_78734_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_067731809.1\|79062_80061_+	DUF1852 family protein	NA	NA	NA	NA
WP_067731810.1\|80096_81140_+	methionine synthase	NA	NA	NA	NA
WP_067731811.1\|81225_81720_+	flavin reductase	Q9KX93	Enterobacteria_phage	9.1e-13	43.2
WP_067731812.1\|81982_82900_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_067731813.1\|84186_85374_-	hypothetical protein	NA	NA	NA	NA
WP_067731815.1\|86001_86385_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_067728626.1\|86381_86717_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_067731816.1\|86791_88411_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.5e-139	52.7
94143:94158	attR	NA	NA	NA	NA

DBSCAN-SWA_2

101080 : 154503

Vibrio_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067731836.1\|101080_102139_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1C9LZZ3	Mycobacterium_phage	2.3e-29	33.2
WP_067731838.1\|102361_102865_+	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	NA	NA	NA	NA
WP_067731839.1\|102861_103182_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_067731805.1\|104282_104681_-\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	2.4e-32	51.2
WP_067731309.1\|104739_106044_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.0e-95	51.4
WP_067732186.1\|106571_107285_+	ion channel protein Tsx	NA	NA	NA	NA
WP_067731842.1\|107337_107835_-	ureidoglycolate lyase	NA	NA	NA	NA
WP_067731844.1\|107850_108855_-	allantoicase	NA	NA	NA	NA
WP_067731846.1\|109062_110220_+	FAD-dependent urate hydroxylase HpxO	NA	NA	NA	NA
WP_067731848.1\|110271_111324_-	Rieske 2Fe-2S domain-containing protein	F2Y2Q3	Organic_Lake_phycodnavirus	9.4e-07	25.0
WP_067732188.1\|111499_112429_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_067731850.1\|112696_113752_+	aromatic ring-hydroxylating dioxygenase subunit alpha	A0A076FFT9	Aureococcus_anophage	2.9e-16	29.7
WP_067731852.1\|113871_114357_+	nucleoside deaminase	NA	NA	NA	NA
WP_067731854.1\|114685_115777_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_067731856.1\|115879_117481_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-25	33.5
WP_067731858.1\|117522_118620_+	ABC transporter permease	NA	NA	NA	NA
WP_067731860.1\|118641_119562_+	ABC transporter permease	NA	NA	NA	NA
WP_067731862.1\|119593_120973_+	amidohydrolase	NA	NA	NA	NA
WP_067731864.1\|121228_121498_+	hypothetical protein	NA	NA	NA	NA
WP_067731866.1\|121674_122355_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_067731867.1\|122570_124667_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_067731868.1\|124666_125677_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_067731870.1\|125673_126690_+	iron ABC transporter permease	NA	NA	NA	NA
WP_067731872.1\|126686_127451_+	ABC transporter ATP-binding protein	A0A2H4UUX5	Bodo_saltans_virus	2.8e-13	29.1
WP_067731874.1\|127453_127942_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_067728081.1\|128061_129024_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	3.1e-33	33.9
WP_067731876.1\|131303_131903_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_067731878.1\|131903_133235_+	sll0787 family AIR synthase-like protein	NA	NA	NA	NA
WP_067731880.1\|133245_134532_+	MSMEG_0569 family flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_067731882.1\|134611_134923_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_067731884.1\|135047_135464_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_067731886.1\|135465_135882_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_067731887.1\|135884_136757_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_081408561.1\|137250_138183_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	1.3e-60	41.8
WP_067731893.1\|138401_146270_+	Ig-like domain repeat protein	NA	NA	NA	NA
WP_067731895.1\|146393_147998_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	6.0e-146	53.8
WP_157883285.1\|147994_148222_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_067731815.1\|148218_148602_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_067731897.1\|148701_149064_+	phenol hydroxylase	NA	NA	NA	NA
WP_004668302.1\|152058_153339_-	cation transporter	NA	NA	NA	NA
WP_081408502.1\|153570_154503_-\|transposase	IS5-like element IS17 family transposase	A0A1V0E8E1	Vibrio_phage	4.5e-61	42.4

DBSCAN-SWA_3

160673 : 165181

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005237341.1\|160673_160889_+	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	1.3e-16	68.3
WP_067731910.1\|160987_161215_+	hypothetical protein	NA	NA	NA	NA
WP_005237334.1\|161283_161481_+	hypothetical protein	NA	NA	NA	NA
WP_005176794.1\|161743_162289_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_067732190.1\|162381_163260_+	DMT family transporter	NA	NA	NA	NA
WP_067731912.1\|163338_163632_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	2.6e-15	46.9
WP_000246756.1\|163621_163867_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A2H4JBG1	uncultured_Caudovirales_phage	1.5e-11	43.2
WP_000537572.1\|163960_164488_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	3.7e-12	27.5
WP_000985610.1\|164596_164878_-	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	5.7e-12	43.3
WP_000286964.1\|164878_165181_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	9.5e-21	49.0

DBSCAN-SWA_4

168530 : 216393

Vibrio_phage(16.67%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081408502.1\|168530_169463_+\|transposase	IS5-like element IS17 family transposase	A0A1V0E8E1	Vibrio_phage	4.5e-61	42.4
WP_101494841.1\|169492_169840_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_067731917.1\|170228_170924_+	DUF1826 domain-containing protein	NA	NA	NA	NA
WP_067731919.1\|171008_172427_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_101494839.1\|172539_172653_+	hypothetical protein	NA	NA	NA	NA
WP_081408569.1\|172746_173451_-	hypothetical protein	NA	NA	NA	NA
WP_067731923.1\|173597_175250_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	5.9e-56	30.8
WP_067731925.1\|175260_176736_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_067731929.1\|176759_177338_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_067731931.1\|177596_179633_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	2.7e-18	25.1
WP_067731933.1\|179657_180266_+	MarC family protein	NA	NA	NA	NA
WP_067731935.1\|180470_181214_-	5'-nucleotidase, lipoprotein e(P4) family	NA	NA	NA	NA
WP_067731939.1\|181236_181818_-	nicotinamide mononucleotide transporter	NA	NA	NA	NA
WP_067731940.1\|181838_184013_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_067731941.1\|184015_185260_-	phosphotransferase	NA	NA	NA	NA
WP_067731942.1\|185596_186286_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_067731944.1\|187105_188410_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.6e-96	51.9
WP_067727883.1\|188468_188867_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	3.2e-32	51.2
WP_067731946.1\|189492_190437_+	ABC transporter permease	G3M9Y4	Bacillus_virus	4.9e-23	28.3
WP_067731948.1\|190436_191318_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.0e-38	38.7
WP_067731950.1\|191396_192407_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA
WP_067731953.1\|192403_193285_+	hypothetical protein	NA	NA	NA	NA
WP_067731955.1\|193293_193623_+	transporter	NA	NA	NA	NA
WP_067731957.1\|193668_194691_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_067731959.1\|194687_196496_-	allophanate hydrolase	NA	NA	NA	NA
WP_067731961.1\|196507_196948_-	transcriptional regulator	NA	NA	NA	NA
WP_067731963.1\|197319_197586_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	1.6e-16	52.4
WP_067731965.1\|197548_197824_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_067731967.1\|197912_201488_-	ATP-binding protein	NA	NA	NA	NA
WP_067731969.1\|201572_205178_-	urea carboxylase	NA	NA	NA	NA
WP_067731971.1\|205179_205833_-	DUF1989 domain-containing protein	NA	NA	NA	NA
WP_067731973.1\|205845_206583_-	DUF1989 domain-containing protein	NA	NA	NA	NA
WP_101494815.1\|207296_208109_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_067731975.1\|208475_209654_-	replication initiation protein	NA	NA	NA	NA
WP_067732192.1\|211215_211989_+	AAA family ATPase	Q8JL10	Natrialba_phage	1.2e-14	34.6
WP_067731977.1\|212001_212913_+	ParB/RepB/Spo0J family partition protein	S5VSZ7	Leptospira_phage	1.1e-11	41.2
WP_067731979.1\|214671_214887_+	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	7.7e-17	66.7
WP_067731981.1\|214946_215174_+	hypothetical protein	NA	NA	NA	NA
WP_067731983.1\|215222_215468_+	hypothetical protein	NA	NA	NA	NA
WP_067731985.1\|215430_216393_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	4.5e-32	33.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015594

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP015595

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection