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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP015601 Pseudomonas antarctica strain PAMC 27494 plasmid pP27494_1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP015600 Pseudomonas antarctica strain PAMC 27494 chromosome, complete genome 5 crisprs DEDDh,RT,DinG,csa3,cas3,WYL 5 9 10 1
NZ_CP015602 Pseudomonas antarctica strain PAMC 27494 plasmid pP27494_2, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP015600
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015600_1 780706-780996 Orphan NA
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015600_2 1858919-1859027 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015600_3 3749067-3751009 Orphan NA
40 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015600_4 5908368-5908463 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015600_5 6073734-6074060 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP015600_3 3.39|3750914|25|NZ_CP015600|CRISPRCasFinder 3750914-3750938 25 NZ_CP015600.1 3751058-3751082 0 1.0
NZ_CP015600_3 3.39|3750914|25|NZ_CP015600|CRISPRCasFinder 3750914-3750938 25 NZ_CP015600.1 3751346-3751370 0 1.0
NZ_CP015600_3 3.40|3750962|25|NZ_CP015600|CRISPRCasFinder 3750962-3750986 25 NZ_CP015600.1 3751106-3751130 0 1.0
NZ_CP015600_4 4.1|5908393|46|NZ_CP015600|CRISPRCasFinder 5908393-5908438 46 NZ_CP015600.1 5908260-5908305 0 1.0
NZ_CP015600_3 3.32|3750578|25|NZ_CP015600|CRISPRCasFinder 3750578-3750602 25 NZ_CP015600.1 3751298-3751322 1 0.96
NZ_CP015600_3 3.39|3750914|25|NZ_CP015600|CRISPRCasFinder 3750914-3750938 25 NZ_CP015600.1 3751490-3751514 1 0.96
NZ_CP015600_3 3.40|3750962|25|NZ_CP015600|CRISPRCasFinder 3750962-3750986 25 NZ_CP015600.1 3751250-3751274 1 0.96
NZ_CP015600_3 3.38|3750866|25|NZ_CP015600|CRISPRCasFinder 3750866-3750890 25 NZ_CP015600.1 3751010-3751034 2 0.92
NZ_CP015600_3 3.38|3750866|25|NZ_CP015600|CRISPRCasFinder 3750866-3750890 25 NZ_CP015600.1 3751154-3751178 2 0.92
NZ_CP015600_3 3.38|3750866|25|NZ_CP015600|CRISPRCasFinder 3750866-3750890 25 NZ_CP015600.1 3751442-3751466 2 0.92
NZ_CP015600_3 3.39|3750914|25|NZ_CP015600|CRISPRCasFinder 3750914-3750938 25 NZ_CP015600.1 3751202-3751226 2 0.92

1. spacer 3.39|3750914|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751058-3751082, mismatch: 0, identity: 1.0

ggagctttcgcccccggctgtttgc	CRISPR spacer
ggagctttcgcccccggctgtttgc	Protospacer
*************************

2. spacer 3.39|3750914|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751346-3751370, mismatch: 0, identity: 1.0

ggagctttcgcccccggctgtttgc	CRISPR spacer
ggagctttcgcccccggctgtttgc	Protospacer
*************************

3. spacer 3.40|3750962|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751106-3751130, mismatch: 0, identity: 1.0

cgaactgtcggagccggcggtgcca	CRISPR spacer
cgaactgtcggagccggcggtgcca	Protospacer
*************************

4. spacer 4.1|5908393|46|NZ_CP015600|CRISPRCasFinder matches to position: 5908260-5908305, mismatch: 0, identity: 1.0

ctgcctgggcgacttgctcacaccactaccctgtgggagcgggctt	CRISPR spacer
ctgcctgggcgacttgctcacaccactaccctgtgggagcgggctt	Protospacer
**********************************************

5. spacer 3.32|3750578|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751298-3751322, mismatch: 1, identity: 0.96

atcactgcccacttgagccgtttgg	CRISPR spacer
atcactgcccacctgagccgtttgg	Protospacer
************.************

6. spacer 3.39|3750914|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751490-3751514, mismatch: 1, identity: 0.96

ggagctttcgcccccggctgtttgc	CRISPR spacer
ggagctttcgcccccggccgtttgc	Protospacer
******************.******

7. spacer 3.40|3750962|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751250-3751274, mismatch: 1, identity: 0.96

cgaactgtcggagccggcggtgcca	CRISPR spacer
cgaactgtcagagccggcggtgcca	Protospacer
*********.***************

8. spacer 3.38|3750866|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751010-3751034, mismatch: 2, identity: 0.92

atcactgccttcttgagccgtctgg	CRISPR spacer
atcactgcctacctgagccgtctgg	Protospacer
********** *.************

9. spacer 3.38|3750866|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751154-3751178, mismatch: 2, identity: 0.92

atcactgccttcttgagccgtctgg	CRISPR spacer
atcactgcctacctgagccgtctgg	Protospacer
********** *.************

10. spacer 3.38|3750866|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751442-3751466, mismatch: 2, identity: 0.92

atcactgccttcttgagccgtctgg	CRISPR spacer
atcactgccttcttgagctgtttgg	Protospacer
******************.**.***

11. spacer 3.39|3750914|25|NZ_CP015600|CRISPRCasFinder matches to position: 3751202-3751226, mismatch: 2, identity: 0.92

ggagctttcgcccccggctgtttgc	CRISPR spacer
ggagctttcgccaccggccgtttgc	Protospacer
************ *****.******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP015600_3 3.15|3749762|25|NZ_CP015600|CRISPRCasFinder 3749762-3749786 25 MH509442 Mycobacterium phage Aminay, complete genome 57056-57080 3 0.88
NZ_CP015600_3 3.19|3749954|25|NZ_CP015600|CRISPRCasFinder 3749954-3749978 25 NZ_CP032695 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence 2178649-2178673 3 0.88
NZ_CP015600_3 3.19|3749954|25|NZ_CP015600|CRISPRCasFinder 3749954-3749978 25 NZ_CP009292 Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence 339294-339318 3 0.88
NZ_CP015600_3 3.31|3750530|25|NZ_CP015600|CRISPRCasFinder 3750530-3750554 25 NZ_CP024924 Sphingomonas sp. Cra20 plasmid unnamed, complete sequence 49354-49378 3 0.88
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP045351 Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence 809803-809832 4 0.867
NZ_CP015600_3 3.5|3749282|25|NZ_CP015600|CRISPRCasFinder 3749282-3749306 25 NZ_CP017423 Arthrobacter sp. ZXY-2 plasmid pZXY22, complete sequence 113344-113368 4 0.84
NZ_CP015600_3 3.19|3749954|25|NZ_CP015600|CRISPRCasFinder 3749954-3749978 25 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 618758-618782 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP018472 Xanthomonas perforans strain LH3 plasmid pLH3.1, complete sequence 12111-12135 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP023286 Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pCuR, complete sequence 84757-84781 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP018859 Xanthomonas citri pv. citri strain LH201 plasmid pLH201.1, complete sequence 65695-65719 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP018851 Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.1, complete sequence 71393-71417 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP018848 Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.1, complete sequence 107850-107874 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP018855 Xanthomonas citri pv. citri strain LH276 plasmid pLH276.1, complete sequence 93628-93652 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP018729 Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence 93794-93818 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP018726 Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.1, complete sequence 85548-85572 4 0.84
NZ_CP015600_3 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder 3750098-3750122 25 NZ_CP018732 Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence 192675-192699 4 0.84
NZ_CP015600_3 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder 3750674-3750698 25 NZ_LR594667 Variovorax sp. SRS16 plasmid 2 386583-386607 4 0.84
NZ_CP015600_3 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder 3750674-3750698 25 NZ_LR594690 Variovorax sp. WDL1 plasmid 2 370507-370531 4 0.84
NZ_CP015600_3 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder 3750674-3750698 25 NZ_LR594672 Variovorax sp. PBL-E5 plasmid 2 386717-386741 4 0.84
NZ_CP015600_3 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder 3750674-3750698 25 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 413795-413819 4 0.84
NZ_CP015600_3 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder 3750674-3750698 25 NZ_CP024924 Sphingomonas sp. Cra20 plasmid unnamed, complete sequence 49354-49378 4 0.84
NZ_CP015600_3 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder 3750674-3750698 25 KT997858 Uncultured Mediterranean phage uvDeep-CGR2-KM19-C37, complete genome 14419-14443 4 0.84
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 MN184886 Erwinia phage pEp_SNUABM_08, complete genome 32225-32254 5 0.833
NZ_CP015600_3 3.15|3749762|25|NZ_CP015600|CRISPRCasFinder 3749762-3749786 25 MK801730 Microbacterium phage Belthelas, complete genome 432-456 5 0.8
NZ_CP015600_3 3.15|3749762|25|NZ_CP015600|CRISPRCasFinder 3749762-3749786 25 MT521990 Microbacterium phage Bri160, complete genome 432-456 5 0.8
NZ_CP015600_3 3.20|3750002|25|NZ_CP015600|CRISPRCasFinder 3750002-3750026 25 NZ_CP039965 Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence 1182018-1182042 5 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP029777 Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence 188038-188067 6 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NC_023143 Phaeobacter gallaeciensis DSM 26640 plasmid pGal_G40, complete sequence 9198-9227 6 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NC_016626 Burkholderia sp. YI23 plasmid byi_1p, complete sequence 233502-233531 6 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP010594 Phaeobacter gallaeciensis strain P11 plasmid pP11_f, complete sequence 9069-9098 6 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 MN693258 Marine virus AFVG_25M459, complete genome 20010-20039 6 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP020539 Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence 318086-318115 6 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP024310 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence 390725-390754 6 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_AP014579 Burkholderia sp. RPE67 plasmid p1, complete sequence 391550-391579 6 0.8
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP023064 Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence 241312-241341 6 0.8
NZ_CP015600_3 3.31|3750530|25|NZ_CP015600|CRISPRCasFinder 3750530-3750554 25 NZ_CP021355 Rhodococcus sp. S2-17 plasmid pRB98, complete sequence 948871-948895 6 0.76
NZ_CP015600_3 3.40|3750962|25|NZ_CP015600|CRISPRCasFinder 3750962-3750986 25 KY940711 Bradyrhizobium phage BDU-MI-1, complete genome 63520-63544 6 0.76
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP050084 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence 8086-8115 7 0.767
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP053209 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence 218345-218374 7 0.767
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP053209 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence 431002-431031 7 0.767
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 MN693258 Marine virus AFVG_25M459, complete genome 19833-19862 7 0.767
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 GU943041 Uncultured phage MedDCM-OCT-S09-C299 genomic sequence 6515-6544 7 0.767
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP029986 Sphingomonas sp. FARSPH plasmid p01, complete sequence 116705-116734 7 0.767
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP029832 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence 193200-193229 7 0.767
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NC_017958 Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence 543393-543422 7 0.767
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 MK524494 Mycobacterium phage Rabbs, complete genome 16970-16999 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 KX641266 Mycobacterium phage Terror, complete genome 16979-17008 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NC_031102 Mycobacterium phage Sneeze, complete genome 16969-16998 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 KX641265 Mycobacterium phage Taheera, complete genome 16979-17008 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 LR134125 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5 724836-724865 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP033873 Caulobacter sp. FWC26 plasmid p1, complete sequence 223685-223714 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP024587 Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence 51332-51361 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 560415-560444 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP012477 Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence 198174-198203 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP015882 Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence 851768-851797 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_CP030264 Ensifer adhaerens strain Corn53 plasmid AB, complete sequence 79161-79190 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 130608-130637 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 KY555147 Caulobacter phage Ccr34, complete genome 199022-199051 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 KY555146 Caulobacter phage Ccr32, complete genome 198582-198611 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 JX163858 Caulobacter phage phiCbK, complete genome 9249-9278 8 0.733
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 MG030346 Proteus phage PM87, complete genome 26416-26445 9 0.7
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 CP059058 Proteus phage ASh-2020a, complete genome 47892-47921 9 0.7
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 MN840486 Proteus phage P16-2532, complete genome 26320-26349 9 0.7
NZ_CP015600_1 1.2|780760|30|NZ_CP015600|CRT 780760-780789 30 MN604053 Escherichia phage E21, complete genome 40401-40430 9 0.7

1. spacer 3.15|3749762|25|NZ_CP015600|CRISPRCasFinder matches to MH509442 (Mycobacterium phage Aminay, complete genome) position: , mismatch: 3, identity: 0.88

cgagctgtcagcgccggcggtactc	CRISPR spacer
cgagctgtgagcgccggcgctacgc	Protospacer
******** ********** *** *

2. spacer 3.19|3749954|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 3, identity: 0.88

atcactgctttcctgggcggtctga	CRISPR spacer
accgcagctttcctgggcggtctga	Protospacer
*.*.* *******************

3. spacer 3.19|3749954|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 3, identity: 0.88

atcact-gctttcctgggcggtctga	CRISPR spacer
-ccgctcgctttcctgggcggtctga	Protospacer
 .*.** *******************

4. spacer 3.31|3750530|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP024924 (Sphingomonas sp. Cra20 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tgagctgtcggaacccgcagtgctc	CRISPR spacer
cgagctgtcggaacccgaagttctc	Protospacer
.**************** *** ***

5. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 4, identity: 0.867

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
atctgtgccaccctcagttccgccgccact	Protospacer
*.********** .************** *

6. spacer 3.5|3749282|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP017423 (Arthrobacter sp. ZXY-2 plasmid pZXY22, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgcttttgtagccggcggtttgc	CRISPR spacer
ggtgcttttgttgccggcggttcaa	Protospacer
*********** **********.. 

7. spacer 3.19|3749954|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

atcactgctttcctgggcggtctga	CRISPR spacer
ctcgctgctttcctgggcgatctgc	Protospacer
 **.***************.**** 

8. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP018472 (Xanthomonas perforans strain LH3 plasmid pLH3.1, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

9. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP023286 (Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pCuR, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

10. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP018859 (Xanthomonas citri pv. citri strain LH201 plasmid pLH201.1, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

11. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP018851 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.1, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

12. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP018848 (Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.1, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

13. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP018855 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.1, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

14. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP018729 (Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

15. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP018726 (Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.1, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

16. spacer 3.22|3750098|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP018732 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence) position: , mismatch: 4, identity: 0.84

catactgccaggtccagtggtggcc	CRISPR spacer
gatactgccaggtcaagtggtgcca	Protospacer
 ************* ******* * 

17. spacer 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 4, identity: 0.84

tgagctgtcggagcccgaagtgctt	CRISPR spacer
cgagctggcggagcgcgaagtgctc	Protospacer
.****** ****** *********.

18. spacer 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 4, identity: 0.84

tgagctgtcggagcccgaagtgctt	CRISPR spacer
cgagctggcggagcgcgaagtgctc	Protospacer
.****** ****** *********.

19. spacer 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 4, identity: 0.84

tgagctgtcggagcccgaagtgctt	CRISPR spacer
cgagctggcggagcgcgaagtgctc	Protospacer
.****** ****** *********.

20. spacer 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 4, identity: 0.84

tgagctgtcggagcccgaagtgctt	CRISPR spacer
cgagctggcggagcgcgaagtgctc	Protospacer
.****** ****** *********.

21. spacer 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP024924 (Sphingomonas sp. Cra20 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

tgagctgtcggagcccgaagtgctt	CRISPR spacer
cgagctgtcggaacccgaagttctc	Protospacer
.***********.******** **.

22. spacer 3.34|3750674|25|NZ_CP015600|CRISPRCasFinder matches to KT997858 (Uncultured Mediterranean phage uvDeep-CGR2-KM19-C37, complete genome) position: , mismatch: 4, identity: 0.84

tgagctgtcggagcccgaagtgctt	CRISPR spacer
caagctgtcagaccccgaagtgctt	Protospacer
..*******.** ************

23. spacer 1.2|780760|30|NZ_CP015600|CRT matches to MN184886 (Erwinia phage pEp_SNUABM_08, complete genome) position: , mismatch: 5, identity: 0.833

acctg---tgccaccgccagttccgccgccagt	CRISPR spacer
---tgggttaccaccgccagttccgccgccagg	Protospacer
   **   *.********************** 

24. spacer 3.15|3749762|25|NZ_CP015600|CRISPRCasFinder matches to MK801730 (Microbacterium phage Belthelas, complete genome) position: , mismatch: 5, identity: 0.8

cgagctgtcagcgccggcggtactc	CRISPR spacer
cgagctgtcagcgccggcgcgctgc	Protospacer
*******************   . *

25. spacer 3.15|3749762|25|NZ_CP015600|CRISPRCasFinder matches to MT521990 (Microbacterium phage Bri160, complete genome) position: , mismatch: 5, identity: 0.8

cgagctgtcagcgccggcggtactc	CRISPR spacer
cgagctgtcagcgccggcgcgctgc	Protospacer
*******************   . *

26. spacer 3.20|3750002|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.8

aatgcttttgtaacccgcagtctgg	CRISPR spacer
ccgccttttgtcacccgcagtctgg	Protospacer
    ******* *************

27. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

acctgtg----ccaccgccagttccgccgccagt	CRISPR spacer
----gtgacgaccacccccagttccgccgccagg	Protospacer
    ***    ***** **************** 

28. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NC_023143 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_G40, complete sequence) position: , mismatch: 6, identity: 0.8

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
acctgtgccaccggcggttccgccagcacc	Protospacer
************* *.********. ** .

29. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 6, identity: 0.8

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gccggaaccaccgccatttccgccgccaga	Protospacer
.** * .********* ************ 

30. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP010594 (Phaeobacter gallaeciensis strain P11 plasmid pP11_f, complete sequence) position: , mismatch: 6, identity: 0.8

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
acctgtgccaccggcggttccgccagcacc	Protospacer
************* *.********. ** .

31. spacer 1.2|780760|30|NZ_CP015600|CRT matches to MN693258 (Marine virus AFVG_25M459, complete genome) position: , mismatch: 6, identity: 0.8

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
atcaacgccaccaccagtaccgccgccagt	Protospacer
*.* ..******.***** ***********

32. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 6, identity: 0.8

acctgtgccaccgccagttccgcc---gccagt	CRISPR spacer
gcctgtgccgccgccagtgccgcctgagcc---	Protospacer
.********.******** *****   ***   

33. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 6, identity: 0.8

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gccattgccaccgccgtttccgccgccatt	Protospacer
.**  **********. *********** *

34. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gccggaaccaccgccatttccgccgccatt	Protospacer
.** * .********* *********** *

35. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 6, identity: 0.8

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gccattgccaccgccgtttccgccgccatt	Protospacer
.**  **********. *********** *

36. spacer 3.31|3750530|25|NZ_CP015600|CRISPRCasFinder matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 6, identity: 0.76

tgagctgtcggaacccgcagtgctc	CRISPR spacer
accaatgtcggaacccgcagtgctg	Protospacer
   . ******************* 

37. spacer 3.40|3750962|25|NZ_CP015600|CRISPRCasFinder matches to KY940711 (Bradyrhizobium phage BDU-MI-1, complete genome) position: , mismatch: 6, identity: 0.76

cgaactgtcggagccggcggtgcca	CRISPR spacer
gtcgttgtcggagccggcggtgccc	Protospacer
   ..******************* 

38. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP050084 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence) position: , mismatch: 7, identity: 0.767

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
atgtccgccacctccagttccgccgccatg	Protospacer
*. * .****** ***************  

39. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP053209 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence) position: , mismatch: 7, identity: 0.767

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
atgtccgccacctccagttccgccgccatg	Protospacer
*. * .****** ***************  

40. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP053209 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence) position: , mismatch: 7, identity: 0.767

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
atgtccgccacctccagttccgccgccatg	Protospacer
*. * .****** ***************  

41. spacer 1.2|780760|30|NZ_CP015600|CRT matches to MN693258 (Marine virus AFVG_25M459, complete genome) position: , mismatch: 7, identity: 0.767

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gccatcacccccgccagtgccgccgccagt	Protospacer
.**  ..** ******** ***********

42. spacer 1.2|780760|30|NZ_CP015600|CRT matches to GU943041 (Uncultured phage MedDCM-OCT-S09-C299 genomic sequence) position: , mismatch: 7, identity: 0.767

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gtccgttccaccgccagttgcgccgccacc	Protospacer
..*.** ************ ******** .

43. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP029986 (Sphingomonas sp. FARSPH plasmid p01, complete sequence) position: , mismatch: 7, identity: 0.767

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
ccgtctgccaccgccagttctgccgcgtct	Protospacer
 * * ***************.*****   *

44. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

-acctgtgccaccgccagttccgccgccagt	CRISPR spacer
ggggtgcg-caccaccagttccgccgccagg	Protospacer
 .  **.* ****.**************** 

45. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.767

-acctgtgccaccgccagttccgccgccagt	CRISPR spacer
tggccg-gccgccgccagtgccgccgccagc	Protospacer
 . *.* ***.******** **********.

46. spacer 1.2|780760|30|NZ_CP015600|CRT matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
cccagcgccaccgccagttccgccggtgcg	Protospacer
 ** *.******************* ..  

47. spacer 1.2|780760|30|NZ_CP015600|CRT matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
cccagcgccaccgccagttccgccggtgcg	Protospacer
 ** *.******************* ..  

48. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
cccagcgccaccgccagttccgccggtgcg	Protospacer
 ** *.******************* ..  

49. spacer 1.2|780760|30|NZ_CP015600|CRT matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
cccagcgccaccgccagttccgccggtgcg	Protospacer
 ** *.******************* ..  

50. spacer 1.2|780760|30|NZ_CP015600|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
ttatccgccaccgccggttcggccgccagc	Protospacer
 . * .*********.**** ********.

51. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP033873 (Caulobacter sp. FWC26 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
ggatcggccaccgccagaaccgccgccaga	Protospacer
.  *  ***********  ********** 

52. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP024587 (Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
tcgcgacccaccgccagctccgccgccacg	Protospacer
 * .*  **********.**********  

53. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
tcgctggccagcgccagttccaccgccagc	Protospacer
 * .  **** **********.*******.

54. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gtttccgccaccgccaagtccgccgccagc	Protospacer
...* .**********. ***********.

55. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
ctgagcgccacagccagtgccgccgccagc	Protospacer
 .  *.***** ****** **********.

56. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
ctgagcgccacagccagtgccgccgccagc	Protospacer
 .  *.***** ****** **********.

57. spacer 1.2|780760|30|NZ_CP015600|CRT matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gtgtaacccaccgccagtttcgccgccact	Protospacer
.. *.  ************.******** *

58. spacer 1.2|780760|30|NZ_CP015600|CRT matches to KY555147 (Caulobacter phage Ccr34, complete genome) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
tctacagccaacgccagttccgccgcctga	Protospacer
 *.   **** **************** * 

59. spacer 1.2|780760|30|NZ_CP015600|CRT matches to KY555146 (Caulobacter phage Ccr32, complete genome) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
tctacagccaacgccagttccgccgcctga	Protospacer
 *.   **** **************** * 

60. spacer 1.2|780760|30|NZ_CP015600|CRT matches to JX163858 (Caulobacter phage phiCbK, complete genome) position: , mismatch: 8, identity: 0.733

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
tctacagccaacgccagttccgccgcctga	Protospacer
 *.   **** **************** * 

61. spacer 1.2|780760|30|NZ_CP015600|CRT matches to MG030346 (Proteus phage PM87, complete genome) position: , mismatch: 9, identity: 0.7

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gttagtaccaccgccagttccgccaccgcc	Protospacer
... **.*****************.**. .

62. spacer 1.2|780760|30|NZ_CP015600|CRT matches to CP059058 (Proteus phage ASh-2020a, complete genome) position: , mismatch: 9, identity: 0.7

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gttagtaccaccgccagttccgccaccgcc	Protospacer
... **.*****************.**. .

63. spacer 1.2|780760|30|NZ_CP015600|CRT matches to MN840486 (Proteus phage P16-2532, complete genome) position: , mismatch: 9, identity: 0.7

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gttagtaccaccgccagttccgccaccgcc	Protospacer
... **.*****************.**. .

64. spacer 1.2|780760|30|NZ_CP015600|CRT matches to MN604053 (Escherichia phage E21, complete genome) position: , mismatch: 9, identity: 0.7

acctgtgccaccgccagttccgccgccagt	CRISPR spacer
gttcgtaccaccgccagttccgccaccgcc	Protospacer
....**.*****************.**. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1327834 : 1415620 109 Pseudomonas_phage(44.83%) integrase,tRNA,terminase,holin,head,portal,capsid,tail,protease,plate attL 1318694:1318724|attR 1416970:1417000
DBSCAN-SWA_2 1487132 : 1493755 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 1498231 : 1535434 55 Pseudomonas_phage(54.05%) tail,holin,capsid,terminase NA
DBSCAN-SWA_4 1576153 : 1581143 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_5 1859084 : 1892690 43 Pseudomonas_virus(66.67%) integrase,tRNA,terminase,holin,tail,head,capsid,portal,plate attL 1853088:1853103|attR 1861379:1861394
DBSCAN-SWA_6 2776418 : 2856662 60 Staphylococcus_phage(16.67%) plate,transposase NA
DBSCAN-SWA_7 3810282 : 3820283 12 uncultured_Caudovirales_phage(71.43%) protease,tRNA NA
DBSCAN-SWA_8 4178403 : 4235486 78 Pseudomonas_phage(40.74%) tail,terminase,integrase,transposase attL 4182926:4182976|attR 4234679:4234729
DBSCAN-SWA_9 4780681 : 4871322 94 Pseudomonas_virus(51.16%) integrase,tRNA,terminase,holin,head,portal,capsid,tail,protease,plate attL 4774293:4774316|attR 4880361:4880384
DBSCAN-SWA_10 5904117 : 5955374 44 Tupanvirus(20.0%) protease,holin NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP015600.1|WP_003194855.1|5915863_5916166_-|sarcosine-oxidase-subunit-delta 5915863_5916166_- 100 aa aa NA NA NA 5904117-5955374 yes