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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP015434 [Haemophilus] ducreyi strain GHA9, complete genome 1 crisprs csa3,cas3,DEDDh,DinG 0 0 133 0

Results visualization

1. NZ_CP015434
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015434_1 1380041-1380252 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 13339 13 Chrysochromulina_ericina_virus(16.67%) NA NA
DBSCAN-SWA_2 21518 : 24389 4 Equid_alphaherpesvirus(33.33%) NA NA
DBSCAN-SWA_3 27454 : 32768 5 Megavirus(66.67%) tRNA NA
DBSCAN-SWA_4 36790 : 39527 3 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_5 45137 : 52849 7 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_6 56105 : 59307 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_7 64750 : 71015 7 Moraxella_phage(25.0%) NA NA
DBSCAN-SWA_8 75332 : 76559 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_9 81443 : 90690 8 Tetraselmis_virus(40.0%) NA NA
DBSCAN-SWA_10 101251 : 102607 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_11 107966 : 120752 11 Escherichia_phage(42.86%) transposase NA
DBSCAN-SWA_12 125636 : 130277 5 Bluetongue_virus(50.0%) transposase NA
DBSCAN-SWA_13 145309 : 155561 11 Burkholderia_phage(20.0%) NA NA
DBSCAN-SWA_14 163555 : 164932 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_15 169985 : 175356 7 Pseudomonas_phage(33.33%) NA NA
DBSCAN-SWA_16 178711 : 179185 1 Wolbachia_phage(100.0%) NA NA
DBSCAN-SWA_17 192073 : 199232 7 Sulfitobacter_phage(25.0%) NA NA
DBSCAN-SWA_18 202302 : 207297 5 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_19 211807 : 215464 3 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_20 220704 : 221505 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_21 227968 : 229825 1 Salinibacter_virus(100.0%) NA NA
DBSCAN-SWA_22 234287 : 245787 10 Bacillus_virus(20.0%) NA NA
DBSCAN-SWA_23 251682 : 271715 18 Rhizobium_phage(12.5%) protease NA
DBSCAN-SWA_24 285871 : 286606 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_25 291240 : 292095 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_26 325964 : 326759 1 Enterobacterial_phage(100.0%) NA NA
DBSCAN-SWA_27 333309 : 336449 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_28 341175 : 346279 5 uncultured_Caudovirales_phage(50.0%) tRNA NA
DBSCAN-SWA_29 350827 : 368862 20 Xanthomonas_phage(14.29%) tRNA NA
DBSCAN-SWA_30 373478 : 390085 15 Klosneuvirus(11.11%) tRNA NA
DBSCAN-SWA_31 398031 : 403048 4 Klosneuvirus(50.0%) tRNA NA
DBSCAN-SWA_32 407806 : 411158 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_33 422993 : 423839 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_34 432731 : 433079 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_35 454402 : 458417 3 Planktothrix_phage(50.0%) tRNA NA
DBSCAN-SWA_36 463845 : 466446 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_37 470619 : 472454 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_38 479565 : 484225 5 Erwinia_phage(50.0%) protease NA
DBSCAN-SWA_39 520053 : 520968 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_40 524710 : 531576 8 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_41 539770 : 540763 1 Heterosigma_akashiwo_virus(100.0%) NA NA
DBSCAN-SWA_42 549286 : 550180 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_43 560051 : 563184 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_44 580719 : 581904 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_45 589951 : 590521 1 Pithovirus(100.0%) NA NA
DBSCAN-SWA_46 594518 : 597002 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_47 604007 : 627556 33 Haemophilus_phage(19.05%) NA NA
DBSCAN-SWA_48 631045 : 639669 5 Pseudomonas_phage(60.0%) NA NA
DBSCAN-SWA_49 646700 : 647228 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_50 660565 : 669260 4 Klosneuvirus(25.0%) NA NA
DBSCAN-SWA_51 678706 : 680041 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_52 686494 : 687823 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_53 691535 : 696782 5 Bacillus_virus(25.0%) protease NA
DBSCAN-SWA_54 703033 : 703675 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_55 708168 : 709338 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_56 722725 : 723391 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_57 728484 : 730968 2 Planktothrix_phage(50.0%) protease NA
DBSCAN-SWA_58 734767 : 736495 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_59 740099 : 742907 1 Moumouvirus(100.0%) tRNA NA
DBSCAN-SWA_60 746424 : 747138 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_61 761106 : 772405 12 Streptococcus_phage(28.57%) tRNA NA
DBSCAN-SWA_62 785653 : 791031 5 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_63 795189 : 807157 7 Sinorhizobium_phage(33.33%) NA NA
DBSCAN-SWA_64 828634 : 832905 4 Megavirus(33.33%) NA NA
DBSCAN-SWA_65 845998 : 847985 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_66 852960 : 855295 2 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_67 860701 : 864050 5 Orpheovirus(50.0%) NA NA
DBSCAN-SWA_68 870123 : 874330 3 Streptococcus_phage(50.0%) protease NA
DBSCAN-SWA_69 879017 : 880208 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_70 889824 : 892916 3 Only_Syngen_Nebraska_virus(50.0%) NA NA
DBSCAN-SWA_71 908688 : 911483 2 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_72 918042 : 924662 7 Morganella_phage(25.0%) NA NA
DBSCAN-SWA_73 931445 : 933377 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_74 938952 : 940212 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_75 947520 : 948600 1 Edwardsiella_phage(100.0%) NA NA
DBSCAN-SWA_76 953474 : 958925 6 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_77 962610 : 975076 11 environmental_halophage(14.29%) tRNA NA
DBSCAN-SWA_78 979823 : 1001366 32 Haemophilus_phage(37.5%) tail,head NA
DBSCAN-SWA_79 1005909 : 1010201 4 Pseudomonas_phage(50.0%) tail NA
DBSCAN-SWA_80 1017106 : 1019353 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_81 1023002 : 1024823 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_82 1033719 : 1041819 7 Klebsiella_phage(25.0%) NA NA
DBSCAN-SWA_83 1051765 : 1053190 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_84 1059027 : 1063380 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_85 1068129 : 1083967 12 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_86 1090800 : 1094324 4 Microbacterium_phage(33.33%) NA NA
DBSCAN-SWA_87 1098537 : 1099377 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_88 1104649 : 1107441 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_89 1118875 : 1122852 2 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_90 1141262 : 1146326 5 Escherichia_phage(33.33%) tRNA NA
DBSCAN-SWA_91 1153553 : 1157106 2 Colwellia_phage(50.0%) NA NA
DBSCAN-SWA_92 1166772 : 1193456 22 Pandoravirus(15.38%) tRNA NA
DBSCAN-SWA_93 1205400 : 1207357 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_94 1217849 : 1220582 2 Agrobacterium_phage(50.0%) tRNA NA
DBSCAN-SWA_95 1224027 : 1245152 21 Cedratvirus(18.18%) protease NA
DBSCAN-SWA_96 1253022 : 1256207 2 Virus_Rctr197k(50.0%) NA NA
DBSCAN-SWA_97 1276508 : 1277969 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_98 1281361 : 1291299 13 Tupanvirus(25.0%) tRNA NA
DBSCAN-SWA_99 1298248 : 1322862 18 Mycoplasma_phage(27.27%) NA NA
DBSCAN-SWA_100 1326815 : 1327451 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_101 1330690 : 1333952 3 Pseudomonas_phage(66.67%) tail NA
DBSCAN-SWA_102 1338495 : 1355484 20 Pseudomonas_phage(72.22%) NA NA
DBSCAN-SWA_103 1358705 : 1366679 13 Pseudomonas_phage(44.44%) integrase,transposase attL 1355643:1355658|attR 1374890:1374905
DBSCAN-SWA_104 1370729 : 1377911 3 Leptospira_phage(33.33%) NA NA
DBSCAN-SWA_105 1393474 : 1399516 4 Hokovirus(33.33%) protease NA
DBSCAN-SWA_106 1409255 : 1413584 4 Tupanvirus(33.33%) tRNA NA
DBSCAN-SWA_107 1417627 : 1426693 8 Bacillus_phage(40.0%) tRNA NA
DBSCAN-SWA_108 1432556 : 1435073 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_109 1440155 : 1441643 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_110 1445724 : 1447212 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_111 1451292 : 1452780 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_112 1463407 : 1464532 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_113 1468721 : 1475929 8 Bacillus_phage(20.0%) protease,tRNA NA
DBSCAN-SWA_114 1485801 : 1503669 11 Escherichia_phage(33.33%) tRNA NA
DBSCAN-SWA_115 1507339 : 1514016 4 Cafeteria_roenbergensis_virus(50.0%) NA NA
DBSCAN-SWA_116 1520363 : 1527044 7 Escherichia_phage(25.0%) tRNA NA
DBSCAN-SWA_117 1534198 : 1547010 11 Sodalis_phage(16.67%) NA NA
DBSCAN-SWA_118 1552362 : 1559740 5 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_119 1567131 : 1568628 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_120 1583273 : 1584614 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_121 1590492 : 1595938 3 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_122 1602169 : 1606062 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_123 1609412 : 1617041 7 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_124 1620467 : 1622756 1 Clostridium_botulinum_C_phage(100.0%) NA NA
DBSCAN-SWA_125 1636142 : 1641931 4 Cyanophage(33.33%) NA NA
DBSCAN-SWA_126 1660291 : 1667977 10 Salmonella_phage(25.0%) NA NA
DBSCAN-SWA_127 1681350 : 1682781 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_128 1692409 : 1698922 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_129 1725013 : 1729864 3 Moraxella_phage(50.0%) NA NA
DBSCAN-SWA_130 1740745 : 1745329 3 Staphylococcus_phage(66.67%) tRNA NA
DBSCAN-SWA_131 1751683 : 1753952 3 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_132 1759757 : 1768586 10 Enterococcus_phage(25.0%) tRNA NA
DBSCAN-SWA_133 1772276 : 1774308 2 Catovirus(50.0%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage