CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015726	Streptomyces sp. RTd22 chromosome, complete genome	17 crisprs	DinG,casR,csa3,c2c9_V-U4,WYL,cas4,DEDDh,cas3,cas6,cas7,cas5,cas1,cas2,Cas14u_CAS-V	3	19	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015726_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_2

2545932-2546017

Orphan

Consensus_repeat	Method
GGGGGCACCTCCCAGCGGTAGCTGGGGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_2

>merge|NZ_CP015726|2|2545932-2546017|CRISPRCasFinder
GGGGGCACCTCCCAGCGGTAGCTGGGGGAAGCTCGCAACCCGCGTGAGGAGAGCGCAGGGGGCACCGCCCAGCGGTAGCTGGGGGA

>NZ_CP015726|2|2|2545932-2546017|CRISPRCasFinder
GGGGGCACCTCCCAGCGGTAGCTGGGGGA	AGCTCGCAACCCGCGTGAGGAGAGCGCA
GGGGGCACCGCCCAGCGGTAGCTGGGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_079152253.1\|2550194_2551022_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP015726.1\|WP_063733824.1\|2539744_2540542_-\|ferritin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|153097
NZ_CP015726.1\|WP_063733826.1\|2543001_2545614_+\|ATP-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|273632
NZ_CP015726.1\|WP_063733820.1\|2537903_2538599_-\|MSMEG_4193-family-putative-phosphomutase	unknown	unknown	gnl\|CDD\|163560
NZ_CP015726.1\|WP_063733818.1\|2534966_2536196_-\|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase	unknown	unknown	gnl\|CDD\|183518
NZ_CP015726.1\|WP_009719153.1\|2542024_2543005_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NZ_CP015726.1\|WP_107451120.1\|2547442_2548027_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|189968
NZ_CP015726.1\|WP_079152252.1\|2546892_2547081_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063733830.1\|2548435_2549776_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|181163
NZ_CP015726.1\|WP_063733832.1\|2551182_2552157_+\|zinc-binding-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176217
NZ_CP015726.1\|WP_079152250.1\|2533620_2534694_+\|PAC2-family-protein	unknown	unknown	gnl\|CDD\|378251
NZ_CP015726.1\|WP_009719158.1\|2537165_2537756_-\|DUF3090-domain-containing-protein	unknown	unknown	gnl\|CDD\|213872
NZ_CP015726.1\|WP_063733834.1\|2552273_2552672_+\|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl\|CDD\|376501
NZ_CP015726.1\|WP_079152251.1\|2536314_2537202_-\|SCO1664-family-protein	unknown	unknown	gnl\|CDD\|274813
NZ_CP015726.1\|WP_063733822.1\|2538697_2539690_+\|magnesium-and-cobalt-transport-protein-CorA	unknown	unknown	gnl\|CDD\|213364
NZ_CP015726.1\|WP_009719152.1\|2546173_2546845_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063733836.1\|2553822_2554701_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_CP015726.1\|WP_159073610.1\|2555071_2555287_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_039942238.1\|2540785_2541835_-\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274647
NZ_CP015726.1\|WP_107451121.1\|2552668_2553826_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_079152253.1\|2550194_2551022_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	1.06383e-08
NZ_CP015726.1\|WP_063733824.1\|2539744_2540542_-\|ferritin-like-domain-containing-protein	gnl\|CDD\|153097	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).	0.00101657
NZ_CP015726.1\|WP_063733826.1\|2543001_2545614_+\|ATP-binding-domain-containing-protein	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	6.58859e-34
NZ_CP015726.1\|WP_063733820.1\|2537903_2538599_-\|MSMEG_4193-family-putative-phosphomutase	gnl\|CDD\|163560	TIGR03848, MSMEG_4193, probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.	2.88665e-114
NZ_CP015726.1\|WP_063733818.1\|2534966_2536196_-\|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase	gnl\|CDD\|183518	PRK12418, PRK12418, cysteinyl-tRNA synthetase; Provisional.	0
NZ_CP015726.1\|WP_009719153.1\|2542024_2543005_+\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	1.58366e-102
NZ_CP015726.1\|WP_107451120.1\|2547442_2548027_+\|hypothetical-protein	gnl\|CDD\|189968	pfam01391, Collagen, Collagen triple helix repeat (20 copies). Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.	2.14301e-05
NZ_CP015726.1\|WP_063733832.1\|2551182_2552157_+\|zinc-binding-alcohol-dehydrogenase	gnl\|CDD\|176217	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	2.726e-70
NZ_CP015726.1\|WP_063733830.1\|2548435_2549776_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|181163	PRK07906, PRK07906, hypothetical protein; Provisional.	0
NZ_CP015726.1\|WP_079152250.1\|2533620_2534694_+\|PAC2-family-protein	gnl\|CDD\|378251	pfam09754, PAC2, PAC2 family. This PAC2 (Proteasome assembly chaperone) family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 247 and 307 amino acids in length. These proteins function as a chaperone for the 26S proteasome. The 26S proteasome mediates ubiquitin-dependent proteolysis in eukaryotic cells. A number of studies including very recent ones have revealed that assembly of its 20S catalytic core particle is an ordered process that involves several conserved proteasome assembly chaperones (PACs). Two heterodimeric chaperones, PAC1-PAC2 and PAC3-PAC4, promote the assembly of rings composed of seven alpha subunits.	5.84992e-52
NZ_CP015726.1\|WP_009719158.1\|2537165_2537756_-\|DUF3090-domain-containing-protein	gnl\|CDD\|213872	TIGR03847, TIGR03847, conserved hypothetical protein. The conserved hypothetical protein described here occurs as part of the trio of uncharacterized proteins common in the Actinobacteria.	6.61833e-87
NZ_CP015726.1\|WP_063733834.1\|2552273_2552672_+\|6-carboxytetrahydropterin-synthase	gnl\|CDD\|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	6.44394e-26
NZ_CP015726.1\|WP_079152251.1\|2536314_2537202_-\|SCO1664-family-protein	gnl\|CDD\|274813	TIGR03843, Phosphatidylinositol_3-_and_4-kinase, conserved hypothetical protein. This model represents a protein family largely restricted to the Actinobacteria (high-GC Gram-positives), although it is also found in the Chloroflexi. Distant similarity to the phosphatidylinositol 3- and 4-kinase is suggested by the matching of some members to pfam00454.	7.31229e-120
NZ_CP015726.1\|WP_039942238.1\|2540785_2541835_-\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274647	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family. Members of this protein family are predicted to be oxidoreductases dependent on coenzyme F420. The family includes a single member in Mycobacterium tuberculosis (Rv3520c/MT3621) but four in Mycobacterium smegmatis. Prediction that this family is F420-dependent is based primarily on Partial Phylogenetic Profiling vs. F420 biosynthesis. [Unknown function, Enzymes of unknown specificity].	6.51608e-136
NZ_CP015726.1\|WP_063733836.1\|2553822_2554701_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	4.15257e-06
NZ_CP015726.1\|WP_063733822.1\|2538697_2539690_+\|magnesium-and-cobalt-transport-protein-CorA	gnl\|CDD\|213364	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily. This bacterial subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes the Mg2+ transporter Mycobacterium tuberculosis CorA (which also transports Co2+). Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.41127e-167
NZ_CP015726.1\|WP_107451121.1\|2552668_2553826_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.73553e-44

>NZ_CP015726.1|WP_063733826.1|2543001_2545614_+|ATP-binding-domain-containing-protein
MTTDHLAGDPPPEEATDASADRAAPAPDAPDATAPGPDRDTAPAPDAASAAAQPGGDPPSAPGPAADSPHPAEAGPPDTPAPAAAPEGPGQPGAESATLGAEPDSPAAHAPGADTDTGTGAEPTGSGNAATDPGQRDAGSAAARAEPDDAAADALAGADAEPTETGAAVPGQPPAADAQAAAGADTTAPAGAATGTGVPGAGAQAGAGGSAESAGGPSAQAPGGGGKGGRSAAAEALAAAVRAVESGERSAASFFNEPRPAPARPQPAAAPAREPARAAAPAPVAPPARPAAAGVAGVREVLAAGGAPEALAVSVAETLGERAAEALREDPWQLLAVPGVRPEQADGFARALLGPECGPGDERRSQALTGWLLERAALEGHTALESSALRAALAKVSVPDPDEALRAAIAGGGVLVFQDALEAPAGARPPAGAAPDDEDAEQPVRVLLGLDRYALAEESLADGFARLITTFADAHKDDAPDWEAAAGAAPSPSAAELIRTAAAHGLVTHSGGEAARAEPAALVAAARSMGLRVCAAAHSEDGRRRLAAVVGADAAVTVAGLLSGGEGPGRDEDGALALDLIAVLDAPQLDVEAAAMLVESLPDGARLVLSGDPGVLWSAGPGRVFADLLAARRCPQVVSRTPDPGPIGELVSGIGIGELNQVEAPGKEVVIVPVRDPGEAVHRTVQLVADSVPRAIGVPSEQTQVITPGHGGAAGTRALNAALKERLNPGPGRFAGFDPGDRVAYTPAPGRALPGTVVSADAEGLRLDCAGAPVVVPREQVGDLVRHGWALTAHQAAGMRWPAAVVVLPGDAAPGLTRAWVYTAFSRGERHLSVVQGAEAALPRAVAEIPFKDRTTRLRSLLQAEAPPTG
>NZ_CP015726.1|WP_009719153.1|2542024_2543005_+|aldo/keto-reductase
MELRHLGRTGLRVSRLGLGTLTWGRDTGEHEAADQLKAFWEAGGTLVDTADVYADGEAEYVLGRLLEGLVPRRDLQIATKAGSVPDPDRRFDGSRGHLLAALDASLERLGTDHVDLWQVHAFDPVTPLEETLQALDIAVSSGRARYVGVSNFCGWQLAKAATWQLASSGAHTRLASTQMEYSLLQRGIEREVLPAALDLGIGLLPSSPLGRGVLTGKYRHMTPSDSRGASELAAFVAPYLDEEASRIVDAVAIAADGLATSALHVALAWVRDRPGVTAPIVGARNAQQLRTALSVEALSLPDEICQALDDVSAPVHRYPDQDWSTL
>NZ_CP015726.1|WP_039942238.1|2540785_2541835_-|LLM-class-F420-dependent-oxidoreductase
MRLGINLGYWGAGMDADNLAVAREADRLGYSVCWAAEAYGSDAATVLSWVAAQTEQIDVGSAIFQIPARTPAMTAMTAATLDSLSGGRFRLGLGVSGPQVSEGWYGVRFDKPLARTREYVDIIRKAMSRERLTHEGENWTLPLPGGPGKPLKLTVHPVREYIPLYIAAIGPKNLEQTGEIADGALVIFFAPEHAEATTLGSLRAGREKAGKTLDGFDLVPTVPLAVGDDVRGLADQFRPYTALYVGGMGSAKQNFYNKLAQRMGYEKEAAEIQEKYLAGDKEGAAAAIPHELIDSTTLLGPVERIADRMKAYAEAGVTTLSLTPAGFTLEERVAGLRAGVEALERAGLA
>NZ_CP015726.1|WP_063733824.1|2539744_2540542_-|ferritin-like-domain-containing-protein
MLSAKSVFQEILGNDESFRLFCSIAASGEAQGGWENGRIAALVPDSRRDLAPKITRHGADEDKHGRIFNALLRKRGLEPAEVPRTTDYTMLLEARGVGLAHEKLRRDEPLTEHDIVIYLAHSRVTEQRAAAQMAMLRGCFGDHPEVGRAVTMIAKDEENHLAYCHEELLRLAAAGYGRTIQRALRECALVEMEVHRCVSLAVMTQMARILGWPKKKSAVLTAGIKAGYGYERLGGWRRMVTLRMPERRDALGGAEPATPEEPEFA
>NZ_CP015726.1|WP_063733822.1|2538697_2539690_+|magnesium-and-cobalt-transport-protein-CorA
MPRVIVDCAIYRDGCRTEGPADFSDALDQARAAGDSFLWIGLHEPTEKEFALVTSEFGLHPLAVEDALTAHQRPKLEVYDDSLFLVLKPVRYEEKAGTVTAGELMVFVGDSFVVTVRHGGANPLSAVRERLEHTPEVLAHGPTAVMYAVADAVVDHYLDVADALHEDLDELETEVFAPDGSGSQNTAGRIYAFKREVLEFRRATGPLAEPMTRLAGAGVPFVHEGSRPFFRDVSDHLTRVNEHVEGLDRLLSDILSAHLAQMGVRQNDDMRKISAWAAMAAVPTLIAGIYGMNFRHMWELRQPWGYPAVVGLMAGVIALLYRMFKRRGWL
>NZ_CP015726.1|WP_063733820.1|2537903_2538599_-|MSMEG_4193-family-putative-phosphomutase
MPTLILVRHGRSTANTAGVLAGWTPGVALDERGTAQAAELPGRLARLPLAAAVTSPLQRCQETLAPLLAARPDLPTHTEERIGECHYGDWSGRKLAELADEPLMNIVQQHPSAAAFPGGESMRAMQARAVDAVRDWNARIEGEHGADATYLMCSHGDIIKAIVADALGLHLDLFQRISVEPCSVTAIRYTPTRPFVVRLGDTGDFAGLAPREDATAERGGDAAVGGDAGAP
>NZ_CP015726.1|WP_009719158.1|2537165_2537756_-|DUF3090-domain-containing-protein
MSRQVFLYDPPDRFVAGTVGLPGRRTFFLQASAGGRTTSVALEKTQVAALAERIDELLDEVVRRTGGNAPVPAVAPSDLSDTAPLDAPVEEEFRVGTMALAWDGEEQRMIVEAQALVELEAESEEDLAEAEERLLQDDVNGPPMLRVRLTGTQARAFAKRALDVVNAGRPPCPLCSLPLDPEGHVCPRQNGYRREA
>NZ_CP015726.1|WP_079152251.1|2536314_2537202_-|SCO1664-family-protein
MSAPERIPPRSLTPPEPSELLALGELTVRGQVREASNAVLYCTVEYEGHSAPCVYKPVAGERPLWDFPDGTLAQREVAAYEISEATGWGLVPPTVLRDGPYGQGMCQLWVEVAIGDGEAAGDGSDGSDGADETDGTELLALVEGDEPGPGWKAVGFAEVGEGRTALLVHADDVRLRRLAVLDAVINNGDRKGGHLLPAAGGRLYAIDHGVTFNAEDKLRTLLWGWAGEPLPDDVLEVLRRLAEQLADDGPLCARLAKLITGAEIEALRDRVAALVRTGVHPAPSGQWPAIPWPPV
>NZ_CP015726.1|WP_063733818.1|2534966_2536196_-|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase
MYAWPASEVPALPGSGRDLRIHDTATGGPITLTPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVWLDTKRQVHYVQNVTDIDDPLLERAVANGDDWTALAERETALFREDMTALRMLPPRHYIGAVESIPGIVPLVERLRDAGAAYEVEGDIYFSVESDPAFGSVSRLDAEAMRLLSAERGGDPERPGKKNPLDPMLWVAAREGEPSWDGGSLGPGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGASHAQVLTGERPFAQSYVHAGMVGLNGEKMSKSKGNLVFVSALRRDGVDPAAIRLALLAHHYRSDWEWTDGVLRDAEDRLARWRAAVSRPDGPSADALVEEMREALANDLDSPAALAAVDRWAAAQSATGGEDEGAPGLVSRAADALLGVAL
>NZ_CP015726.1|WP_079152250.1|2533620_2534694_+|PAC2-family-protein
MIELEGVPELIDPVMICAFEGWNDAGDAASTAVGHLDREWKGEVFASLDAEDYYDFQVNRPTVALDNGVRKITWPTTRLSVVRAEGGEKTRDLVLVRGIEPSMRWRSFCNEILGYAHELGVEMVVVLGALLGDTPHTRPVPVSGVTSDPDLARSLDLEETRYEGPTGIVGILQEACTHAGVPAVSLWAAVPHYVSQPPNPKATLALLNRLEDLIGVRIPLGELTEDARAWQLGVDQLASEDSEVAEYVQSLEEARDTAELPEASGEAIAREFERYLRRRDGSPGAPGAPGSHATETGTGGIADAPYLRDPGSGHARPWRPSAKDDEGEGSGGGGGAAEEAGSGDAGNDAEDRPDDQG
>NZ_CP015726.1|WP_009719152.1|2546173_2546845_-|hypothetical-protein
MSDAAQPSAAEVRAAAEAVKAALDRHLDAVERRSGEGDPAVYAAFNELAAAAEVYDELLYDTYDEVTPFEIPGDDSLPAYAGPDEPSALSVLIRRDYAVVEPQRLLSQAQRIVDLDPDLDTGGGRLGGGTAGAGESVHAALGVVFGEFEPDEIASRHKEFGLEEGDSTLWVSALEEPAEPGEWLTAPFDLADPEQIVCRFDVSSVFDEELDDEDDLEVLGPGS
>NZ_CP015726.1|WP_079152252.1|2546892_2547081_+|hypothetical-protein
MPEYEFCDVYVPRGVSRNATTRLLTDHAEYGHWELDRLRLNPDGSRRVRLRRRIIRQLRATW
>NZ_CP015726.1|WP_107451120.1|2547442_2548027_+|hypothetical-protein
MPGWPGLPGLPGLPGVPGFPGLPGFPGLPGVPGFPGFPGFPGLPGLPGFPGFPGLPGFSGTASTTPSQSPPPLFPAAITPMLFPHTVTGTCTGAWMLLPEPTPGEVWVLPWAEELPAWEPLDELPEVDELPEPAELPEPCCAPPPHRASLRNPRTFTVFPHRLTGTCTGAWMLLPETTPGEFPALPFAPESACA
>NZ_CP015726.1|WP_063733830.1|2548435_2549776_-|M20/M25/M40-family-metallo-hydrolase
MSESQSGGTKAGTVKGEDEVVDLCRDLIRIDTSNYGPDHSGPGERAAAEYVAEKLAEVGLEPQIFESRKGRASTVARIEGEDPSRPALLIHGHTDVVPANAEDWTHHPFSGEIVDDCVWGRGAVDMKDMDAMTLAVVRERLRTGRKPPRDIVLAFLADEEAGGVFGARHLVNNHPDLFEGVTEAIGEVGGFSFTVNEDLRLYLIETAQKGMHWMRLTVDGTAGHGSMTNNDNAITELSEAVGRLGRHKFPIRVTKTVRSFLDELSDALGTPLDPDNMDETLAKLGGIAKLIGATLQNTAAPTMLGAGYKVNVIPGQATAHVDGRFLPGLEGEFLADLDRILGPKVKREDVHADKALETTFDGALVDAMQSALKAEDPIARAVPYCLSGGTDAKSFDDLGIRCFGFAPLKLPPELDFAGMFHGVDERVPVDGLKFGVRVLDRFLDAC
>NZ_CP015726.1|WP_079152253.1|2550194_2551022_-|CDP-alcohol-phosphatidyltransferase-family-protein
MALNHTDNARLLRQETAAGAGVQILLLTLLGASLDLGPAGWLTGLAFAAVSWAVLTRAVSRSWLSSFGAANRVTLARATLVGGVTALVADSFTSPPRVAVLTALTAVALILDAVDGQVARRTGTSSTLGARFDMEVDAILILVLSVYVATALGPWVLLIGAMRYAFVAAARFLPWMNAPLPHSMARKTVAALQGVALLVAATGLLPAPANLAVVLLALTTLIWSFARDTAWLWSTGKAARAEARTEPDRPVAGVARLARPVPRVVRDEPVPARSA
>NZ_CP015726.1|WP_063733832.1|2551182_2552157_+|zinc-binding-alcohol-dehydrogenase
MERVARAFWLNSPGHGGIRDVVLPEPAEGEVVVRTLCSGVSRGTEALVFRGGVPESQYGAMRAPFQEGDFPGPVKYGYLNVGVVEEGPRELAGRTVFCLFPHQTRYVVPAGAVTPVPEGVPAERAVLAGTVETAVNALWDAAPLLGDRITVIGAGMVGASVAALLARYPAVRVQLVDADPARAELAKALGVDFALPEDAEGERDLVVHASASEAGLARSLELLAPEGTVIELSWYGDRRISVPLGEAFHSRRLTVRSSQVGTVSPAARAGRRGYADRLAVALELLADPALDALVTGECAFDELPGVMARITAGELPGLCHRVRY
>NZ_CP015726.1|WP_063733834.1|2552273_2552672_+|6-carboxytetrahydropterin-synthase
MFSITVRDHLMVAHSFSGEVFGPAQRLHGATFLVDATFRRAALDDDNIVVDIGLATQELGAVVGDLNYRNLDDEPAFKGINTSTEFLAKVIADRLAERVHAGALGEGARGLAGIQVTLHESHVAWASYERDL
>NZ_CP015726.1|WP_107451121.1|2552668_2553826_+|glycosyltransferase-family-4-protein
MTAHLDSPGSLLGLGSGAAPPPVREVHVVMPGGVDDPATPSGGNTYDRRICRELPGIGWDVHEHTIAGSWPQPGPAARAELTRLLAELADGSIVLLDGLVACAVPYLVVPEAERLRPAVLVHLPLGEETGLAPGRAADLDALERKTLRAMPAVVATSGWAARRLVAHHELAPGRVHVAAPGADVAPQASGTDEGTRLLCVASVTPRKGQHRLVEALAEVADLPWTLECVGGLDQDPGYVERLRELIEASGLGDRVRLTGPRGGAELEASFAGADLLVLASYAETYGMVVTEALAHGVPVLATSVGGIPEALGYAPEGSVPGLLVTPDDPAALTAALRRWLGDPDVRRRLITAARGRRTALDGWHTTASDLAGALERLRREPRRAA
>NZ_CP015726.1|WP_063733836.1|2553822_2554701_+|methyltransferase-domain-containing-protein
MTTTDTPQYAPEWLELREGADAAARAPELLEPLRARLAETAGRSVRVIHDLGCGTGSLGRWLAPRLDGPQEWVLHDHDPGLLELAAERAPRAAADGSPVTVRTRRGDLGSLTADDLAGASLVTASALLDVLTTEEVEGLAAACAGAGCPVLLALSVAGRVELTPADPLDADFADAFNAHQRRSGLLGPDAVEVASEAFARHGATVRTHASPWVLGGGESALAAEWLRGWVGAAVEHRPELEPRAETYLRRRLAECAAGELRVVVHHDDLLALPRPVGHGPTPVSHGPTGGVS
>NZ_CP015726.1|WP_159073610.1|2555071_2555287_-|hypothetical-protein
MSAARSARRPREVPGLRRSRTTATAPSPHTASSAGAAPGVVATACSTRPPSDRAREGRANSSATPTITSTT

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Crispr_ID: NZ_CP015726_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_1

2545684-2545839

Orphan

Consensus_repeat	Method
GGGGGCACCTCCCAGCGGTAGCTGGGGGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP015726_1

>merge|NZ_CP015726|1|2545684-2545839|CRISPRCasFinder
GGGGGCACCTCCCGGCGGCACCGGGGGCGCGTGCGATCGCAAGACGGAGGGTCGCCCTCGCGGGGGCACCCCCCGGACGGAGTCCGGGGGCGGGCCTACTCGGACGCGCCCGACAACGCAGCGAGAGGGAGCACCTCCCAGCGGTGGCTGGGGGAG

>NZ_CP015726|1|1|2545684-2545839|CRISPRCasFinder
GGGGGCACCTCCCGGCGGCACCGGGGGCG	CGTGCGATCGCAAGACGGAGGGTCGCCCTCGC
GGGGGCACCCCCCGGACGGAGTCCGGGGG	CGGGCCTACTCGGACGCGCCCGACAACGCAGCGAGA
GGGAGCACCTCCCAGCGGTGGCTGGGGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_079152253.1\|2550194_2551022_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP015726.1\|WP_063733824.1\|2539744_2540542_-\|ferritin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|153097
NZ_CP015726.1\|WP_063733826.1\|2543001_2545614_+\|ATP-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|273632
NZ_CP015726.1\|WP_063733820.1\|2537903_2538599_-\|MSMEG_4193-family-putative-phosphomutase	unknown	unknown	gnl\|CDD\|163560
NZ_CP015726.1\|WP_063733818.1\|2534966_2536196_-\|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase	unknown	unknown	gnl\|CDD\|183518
NZ_CP015726.1\|WP_009719153.1\|2542024_2543005_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NZ_CP015726.1\|WP_107451120.1\|2547442_2548027_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|189968
NZ_CP015726.1\|WP_079152252.1\|2546892_2547081_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063733830.1\|2548435_2549776_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|181163
NZ_CP015726.1\|WP_063733832.1\|2551182_2552157_+\|zinc-binding-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176217
NZ_CP015726.1\|WP_079152250.1\|2533620_2534694_+\|PAC2-family-protein	unknown	unknown	gnl\|CDD\|378251
NZ_CP015726.1\|WP_009719158.1\|2537165_2537756_-\|DUF3090-domain-containing-protein	unknown	unknown	gnl\|CDD\|213872
NZ_CP015726.1\|WP_063733834.1\|2552273_2552672_+\|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl\|CDD\|376501
NZ_CP015726.1\|WP_079152251.1\|2536314_2537202_-\|SCO1664-family-protein	unknown	unknown	gnl\|CDD\|274813
NZ_CP015726.1\|WP_063733822.1\|2538697_2539690_+\|magnesium-and-cobalt-transport-protein-CorA	unknown	unknown	gnl\|CDD\|213364
NZ_CP015726.1\|WP_009719152.1\|2546173_2546845_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063733836.1\|2553822_2554701_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_CP015726.1\|WP_159073610.1\|2555071_2555287_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_039942238.1\|2540785_2541835_-\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274647
NZ_CP015726.1\|WP_107451121.1\|2552668_2553826_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_079152253.1\|2550194_2551022_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	1.06383e-08
NZ_CP015726.1\|WP_063733824.1\|2539744_2540542_-\|ferritin-like-domain-containing-protein	gnl\|CDD\|153097	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).	0.00101657
NZ_CP015726.1\|WP_063733826.1\|2543001_2545614_+\|ATP-binding-domain-containing-protein	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	6.58859e-34
NZ_CP015726.1\|WP_063733820.1\|2537903_2538599_-\|MSMEG_4193-family-putative-phosphomutase	gnl\|CDD\|163560	TIGR03848, MSMEG_4193, probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.	2.88665e-114
NZ_CP015726.1\|WP_063733818.1\|2534966_2536196_-\|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase	gnl\|CDD\|183518	PRK12418, PRK12418, cysteinyl-tRNA synthetase; Provisional.	0
NZ_CP015726.1\|WP_009719153.1\|2542024_2543005_+\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	1.58366e-102
NZ_CP015726.1\|WP_107451120.1\|2547442_2548027_+\|hypothetical-protein	gnl\|CDD\|189968	pfam01391, Collagen, Collagen triple helix repeat (20 copies). Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.	2.14301e-05
NZ_CP015726.1\|WP_063733832.1\|2551182_2552157_+\|zinc-binding-alcohol-dehydrogenase	gnl\|CDD\|176217	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	2.726e-70
NZ_CP015726.1\|WP_063733830.1\|2548435_2549776_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|181163	PRK07906, PRK07906, hypothetical protein; Provisional.	0
NZ_CP015726.1\|WP_079152250.1\|2533620_2534694_+\|PAC2-family-protein	gnl\|CDD\|378251	pfam09754, PAC2, PAC2 family. This PAC2 (Proteasome assembly chaperone) family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 247 and 307 amino acids in length. These proteins function as a chaperone for the 26S proteasome. The 26S proteasome mediates ubiquitin-dependent proteolysis in eukaryotic cells. A number of studies including very recent ones have revealed that assembly of its 20S catalytic core particle is an ordered process that involves several conserved proteasome assembly chaperones (PACs). Two heterodimeric chaperones, PAC1-PAC2 and PAC3-PAC4, promote the assembly of rings composed of seven alpha subunits.	5.84992e-52
NZ_CP015726.1\|WP_009719158.1\|2537165_2537756_-\|DUF3090-domain-containing-protein	gnl\|CDD\|213872	TIGR03847, TIGR03847, conserved hypothetical protein. The conserved hypothetical protein described here occurs as part of the trio of uncharacterized proteins common in the Actinobacteria.	6.61833e-87
NZ_CP015726.1\|WP_063733834.1\|2552273_2552672_+\|6-carboxytetrahydropterin-synthase	gnl\|CDD\|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	6.44394e-26
NZ_CP015726.1\|WP_079152251.1\|2536314_2537202_-\|SCO1664-family-protein	gnl\|CDD\|274813	TIGR03843, Phosphatidylinositol_3-_and_4-kinase, conserved hypothetical protein. This model represents a protein family largely restricted to the Actinobacteria (high-GC Gram-positives), although it is also found in the Chloroflexi. Distant similarity to the phosphatidylinositol 3- and 4-kinase is suggested by the matching of some members to pfam00454.	7.31229e-120
NZ_CP015726.1\|WP_039942238.1\|2540785_2541835_-\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274647	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family. Members of this protein family are predicted to be oxidoreductases dependent on coenzyme F420. The family includes a single member in Mycobacterium tuberculosis (Rv3520c/MT3621) but four in Mycobacterium smegmatis. Prediction that this family is F420-dependent is based primarily on Partial Phylogenetic Profiling vs. F420 biosynthesis. [Unknown function, Enzymes of unknown specificity].	6.51608e-136
NZ_CP015726.1\|WP_063733836.1\|2553822_2554701_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	4.15257e-06
NZ_CP015726.1\|WP_063733822.1\|2538697_2539690_+\|magnesium-and-cobalt-transport-protein-CorA	gnl\|CDD\|213364	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily. This bacterial subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes the Mg2+ transporter Mycobacterium tuberculosis CorA (which also transports Co2+). Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.41127e-167
NZ_CP015726.1\|WP_107451121.1\|2552668_2553826_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.73553e-44

>NZ_CP015726.1|WP_063733826.1|2543001_2545614_+|ATP-binding-domain-containing-protein
MTTDHLAGDPPPEEATDASADRAAPAPDAPDATAPGPDRDTAPAPDAASAAAQPGGDPPSAPGPAADSPHPAEAGPPDTPAPAAAPEGPGQPGAESATLGAEPDSPAAHAPGADTDTGTGAEPTGSGNAATDPGQRDAGSAAARAEPDDAAADALAGADAEPTETGAAVPGQPPAADAQAAAGADTTAPAGAATGTGVPGAGAQAGAGGSAESAGGPSAQAPGGGGKGGRSAAAEALAAAVRAVESGERSAASFFNEPRPAPARPQPAAAPAREPARAAAPAPVAPPARPAAAGVAGVREVLAAGGAPEALAVSVAETLGERAAEALREDPWQLLAVPGVRPEQADGFARALLGPECGPGDERRSQALTGWLLERAALEGHTALESSALRAALAKVSVPDPDEALRAAIAGGGVLVFQDALEAPAGARPPAGAAPDDEDAEQPVRVLLGLDRYALAEESLADGFARLITTFADAHKDDAPDWEAAAGAAPSPSAAELIRTAAAHGLVTHSGGEAARAEPAALVAAARSMGLRVCAAAHSEDGRRRLAAVVGADAAVTVAGLLSGGEGPGRDEDGALALDLIAVLDAPQLDVEAAAMLVESLPDGARLVLSGDPGVLWSAGPGRVFADLLAARRCPQVVSRTPDPGPIGELVSGIGIGELNQVEAPGKEVVIVPVRDPGEAVHRTVQLVADSVPRAIGVPSEQTQVITPGHGGAAGTRALNAALKERLNPGPGRFAGFDPGDRVAYTPAPGRALPGTVVSADAEGLRLDCAGAPVVVPREQVGDLVRHGWALTAHQAAGMRWPAAVVVLPGDAAPGLTRAWVYTAFSRGERHLSVVQGAEAALPRAVAEIPFKDRTTRLRSLLQAEAPPTG
>NZ_CP015726.1|WP_009719153.1|2542024_2543005_+|aldo/keto-reductase
MELRHLGRTGLRVSRLGLGTLTWGRDTGEHEAADQLKAFWEAGGTLVDTADVYADGEAEYVLGRLLEGLVPRRDLQIATKAGSVPDPDRRFDGSRGHLLAALDASLERLGTDHVDLWQVHAFDPVTPLEETLQALDIAVSSGRARYVGVSNFCGWQLAKAATWQLASSGAHTRLASTQMEYSLLQRGIEREVLPAALDLGIGLLPSSPLGRGVLTGKYRHMTPSDSRGASELAAFVAPYLDEEASRIVDAVAIAADGLATSALHVALAWVRDRPGVTAPIVGARNAQQLRTALSVEALSLPDEICQALDDVSAPVHRYPDQDWSTL
>NZ_CP015726.1|WP_039942238.1|2540785_2541835_-|LLM-class-F420-dependent-oxidoreductase
MRLGINLGYWGAGMDADNLAVAREADRLGYSVCWAAEAYGSDAATVLSWVAAQTEQIDVGSAIFQIPARTPAMTAMTAATLDSLSGGRFRLGLGVSGPQVSEGWYGVRFDKPLARTREYVDIIRKAMSRERLTHEGENWTLPLPGGPGKPLKLTVHPVREYIPLYIAAIGPKNLEQTGEIADGALVIFFAPEHAEATTLGSLRAGREKAGKTLDGFDLVPTVPLAVGDDVRGLADQFRPYTALYVGGMGSAKQNFYNKLAQRMGYEKEAAEIQEKYLAGDKEGAAAAIPHELIDSTTLLGPVERIADRMKAYAEAGVTTLSLTPAGFTLEERVAGLRAGVEALERAGLA
>NZ_CP015726.1|WP_063733824.1|2539744_2540542_-|ferritin-like-domain-containing-protein
MLSAKSVFQEILGNDESFRLFCSIAASGEAQGGWENGRIAALVPDSRRDLAPKITRHGADEDKHGRIFNALLRKRGLEPAEVPRTTDYTMLLEARGVGLAHEKLRRDEPLTEHDIVIYLAHSRVTEQRAAAQMAMLRGCFGDHPEVGRAVTMIAKDEENHLAYCHEELLRLAAAGYGRTIQRALRECALVEMEVHRCVSLAVMTQMARILGWPKKKSAVLTAGIKAGYGYERLGGWRRMVTLRMPERRDALGGAEPATPEEPEFA
>NZ_CP015726.1|WP_063733822.1|2538697_2539690_+|magnesium-and-cobalt-transport-protein-CorA
MPRVIVDCAIYRDGCRTEGPADFSDALDQARAAGDSFLWIGLHEPTEKEFALVTSEFGLHPLAVEDALTAHQRPKLEVYDDSLFLVLKPVRYEEKAGTVTAGELMVFVGDSFVVTVRHGGANPLSAVRERLEHTPEVLAHGPTAVMYAVADAVVDHYLDVADALHEDLDELETEVFAPDGSGSQNTAGRIYAFKREVLEFRRATGPLAEPMTRLAGAGVPFVHEGSRPFFRDVSDHLTRVNEHVEGLDRLLSDILSAHLAQMGVRQNDDMRKISAWAAMAAVPTLIAGIYGMNFRHMWELRQPWGYPAVVGLMAGVIALLYRMFKRRGWL
>NZ_CP015726.1|WP_063733820.1|2537903_2538599_-|MSMEG_4193-family-putative-phosphomutase
MPTLILVRHGRSTANTAGVLAGWTPGVALDERGTAQAAELPGRLARLPLAAAVTSPLQRCQETLAPLLAARPDLPTHTEERIGECHYGDWSGRKLAELADEPLMNIVQQHPSAAAFPGGESMRAMQARAVDAVRDWNARIEGEHGADATYLMCSHGDIIKAIVADALGLHLDLFQRISVEPCSVTAIRYTPTRPFVVRLGDTGDFAGLAPREDATAERGGDAAVGGDAGAP
>NZ_CP015726.1|WP_009719158.1|2537165_2537756_-|DUF3090-domain-containing-protein
MSRQVFLYDPPDRFVAGTVGLPGRRTFFLQASAGGRTTSVALEKTQVAALAERIDELLDEVVRRTGGNAPVPAVAPSDLSDTAPLDAPVEEEFRVGTMALAWDGEEQRMIVEAQALVELEAESEEDLAEAEERLLQDDVNGPPMLRVRLTGTQARAFAKRALDVVNAGRPPCPLCSLPLDPEGHVCPRQNGYRREA
>NZ_CP015726.1|WP_079152251.1|2536314_2537202_-|SCO1664-family-protein
MSAPERIPPRSLTPPEPSELLALGELTVRGQVREASNAVLYCTVEYEGHSAPCVYKPVAGERPLWDFPDGTLAQREVAAYEISEATGWGLVPPTVLRDGPYGQGMCQLWVEVAIGDGEAAGDGSDGSDGADETDGTELLALVEGDEPGPGWKAVGFAEVGEGRTALLVHADDVRLRRLAVLDAVINNGDRKGGHLLPAAGGRLYAIDHGVTFNAEDKLRTLLWGWAGEPLPDDVLEVLRRLAEQLADDGPLCARLAKLITGAEIEALRDRVAALVRTGVHPAPSGQWPAIPWPPV
>NZ_CP015726.1|WP_063733818.1|2534966_2536196_-|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase
MYAWPASEVPALPGSGRDLRIHDTATGGPITLTPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVWLDTKRQVHYVQNVTDIDDPLLERAVANGDDWTALAERETALFREDMTALRMLPPRHYIGAVESIPGIVPLVERLRDAGAAYEVEGDIYFSVESDPAFGSVSRLDAEAMRLLSAERGGDPERPGKKNPLDPMLWVAAREGEPSWDGGSLGPGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGASHAQVLTGERPFAQSYVHAGMVGLNGEKMSKSKGNLVFVSALRRDGVDPAAIRLALLAHHYRSDWEWTDGVLRDAEDRLARWRAAVSRPDGPSADALVEEMREALANDLDSPAALAAVDRWAAAQSATGGEDEGAPGLVSRAADALLGVAL
>NZ_CP015726.1|WP_079152250.1|2533620_2534694_+|PAC2-family-protein
MIELEGVPELIDPVMICAFEGWNDAGDAASTAVGHLDREWKGEVFASLDAEDYYDFQVNRPTVALDNGVRKITWPTTRLSVVRAEGGEKTRDLVLVRGIEPSMRWRSFCNEILGYAHELGVEMVVVLGALLGDTPHTRPVPVSGVTSDPDLARSLDLEETRYEGPTGIVGILQEACTHAGVPAVSLWAAVPHYVSQPPNPKATLALLNRLEDLIGVRIPLGELTEDARAWQLGVDQLASEDSEVAEYVQSLEEARDTAELPEASGEAIAREFERYLRRRDGSPGAPGAPGSHATETGTGGIADAPYLRDPGSGHARPWRPSAKDDEGEGSGGGGGAAEEAGSGDAGNDAEDRPDDQG
>NZ_CP015726.1|WP_009719152.1|2546173_2546845_-|hypothetical-protein
MSDAAQPSAAEVRAAAEAVKAALDRHLDAVERRSGEGDPAVYAAFNELAAAAEVYDELLYDTYDEVTPFEIPGDDSLPAYAGPDEPSALSVLIRRDYAVVEPQRLLSQAQRIVDLDPDLDTGGGRLGGGTAGAGESVHAALGVVFGEFEPDEIASRHKEFGLEEGDSTLWVSALEEPAEPGEWLTAPFDLADPEQIVCRFDVSSVFDEELDDEDDLEVLGPGS
>NZ_CP015726.1|WP_079152252.1|2546892_2547081_+|hypothetical-protein
MPEYEFCDVYVPRGVSRNATTRLLTDHAEYGHWELDRLRLNPDGSRRVRLRRRIIRQLRATW
>NZ_CP015726.1|WP_107451120.1|2547442_2548027_+|hypothetical-protein
MPGWPGLPGLPGLPGVPGFPGLPGFPGLPGVPGFPGFPGFPGLPGLPGFPGFPGLPGFSGTASTTPSQSPPPLFPAAITPMLFPHTVTGTCTGAWMLLPEPTPGEVWVLPWAEELPAWEPLDELPEVDELPEPAELPEPCCAPPPHRASLRNPRTFTVFPHRLTGTCTGAWMLLPETTPGEFPALPFAPESACA
>NZ_CP015726.1|WP_063733830.1|2548435_2549776_-|M20/M25/M40-family-metallo-hydrolase
MSESQSGGTKAGTVKGEDEVVDLCRDLIRIDTSNYGPDHSGPGERAAAEYVAEKLAEVGLEPQIFESRKGRASTVARIEGEDPSRPALLIHGHTDVVPANAEDWTHHPFSGEIVDDCVWGRGAVDMKDMDAMTLAVVRERLRTGRKPPRDIVLAFLADEEAGGVFGARHLVNNHPDLFEGVTEAIGEVGGFSFTVNEDLRLYLIETAQKGMHWMRLTVDGTAGHGSMTNNDNAITELSEAVGRLGRHKFPIRVTKTVRSFLDELSDALGTPLDPDNMDETLAKLGGIAKLIGATLQNTAAPTMLGAGYKVNVIPGQATAHVDGRFLPGLEGEFLADLDRILGPKVKREDVHADKALETTFDGALVDAMQSALKAEDPIARAVPYCLSGGTDAKSFDDLGIRCFGFAPLKLPPELDFAGMFHGVDERVPVDGLKFGVRVLDRFLDAC
>NZ_CP015726.1|WP_079152253.1|2550194_2551022_-|CDP-alcohol-phosphatidyltransferase-family-protein
MALNHTDNARLLRQETAAGAGVQILLLTLLGASLDLGPAGWLTGLAFAAVSWAVLTRAVSRSWLSSFGAANRVTLARATLVGGVTALVADSFTSPPRVAVLTALTAVALILDAVDGQVARRTGTSSTLGARFDMEVDAILILVLSVYVATALGPWVLLIGAMRYAFVAAARFLPWMNAPLPHSMARKTVAALQGVALLVAATGLLPAPANLAVVLLALTTLIWSFARDTAWLWSTGKAARAEARTEPDRPVAGVARLARPVPRVVRDEPVPARSA
>NZ_CP015726.1|WP_063733832.1|2551182_2552157_+|zinc-binding-alcohol-dehydrogenase
MERVARAFWLNSPGHGGIRDVVLPEPAEGEVVVRTLCSGVSRGTEALVFRGGVPESQYGAMRAPFQEGDFPGPVKYGYLNVGVVEEGPRELAGRTVFCLFPHQTRYVVPAGAVTPVPEGVPAERAVLAGTVETAVNALWDAAPLLGDRITVIGAGMVGASVAALLARYPAVRVQLVDADPARAELAKALGVDFALPEDAEGERDLVVHASASEAGLARSLELLAPEGTVIELSWYGDRRISVPLGEAFHSRRLTVRSSQVGTVSPAARAGRRGYADRLAVALELLADPALDALVTGECAFDELPGVMARITAGELPGLCHRVRY
>NZ_CP015726.1|WP_063733834.1|2552273_2552672_+|6-carboxytetrahydropterin-synthase
MFSITVRDHLMVAHSFSGEVFGPAQRLHGATFLVDATFRRAALDDDNIVVDIGLATQELGAVVGDLNYRNLDDEPAFKGINTSTEFLAKVIADRLAERVHAGALGEGARGLAGIQVTLHESHVAWASYERDL
>NZ_CP015726.1|WP_107451121.1|2552668_2553826_+|glycosyltransferase-family-4-protein
MTAHLDSPGSLLGLGSGAAPPPVREVHVVMPGGVDDPATPSGGNTYDRRICRELPGIGWDVHEHTIAGSWPQPGPAARAELTRLLAELADGSIVLLDGLVACAVPYLVVPEAERLRPAVLVHLPLGEETGLAPGRAADLDALERKTLRAMPAVVATSGWAARRLVAHHELAPGRVHVAAPGADVAPQASGTDEGTRLLCVASVTPRKGQHRLVEALAEVADLPWTLECVGGLDQDPGYVERLRELIEASGLGDRVRLTGPRGGAELEASFAGADLLVLASYAETYGMVVTEALAHGVPVLATSVGGIPEALGYAPEGSVPGLLVTPDDPAALTAALRRWLGDPDVRRRLITAARGRRTALDGWHTTASDLAGALERLRREPRRAA
>NZ_CP015726.1|WP_063733836.1|2553822_2554701_+|methyltransferase-domain-containing-protein
MTTTDTPQYAPEWLELREGADAAARAPELLEPLRARLAETAGRSVRVIHDLGCGTGSLGRWLAPRLDGPQEWVLHDHDPGLLELAAERAPRAAADGSPVTVRTRRGDLGSLTADDLAGASLVTASALLDVLTTEEVEGLAAACAGAGCPVLLALSVAGRVELTPADPLDADFADAFNAHQRRSGLLGPDAVEVASEAFARHGATVRTHASPWVLGGGESALAAEWLRGWVGAAVEHRPELEPRAETYLRRRLAECAAGELRVVVHHDDLLALPRPVGHGPTPVSHGPTGGVS
>NZ_CP015726.1|WP_159073610.1|2555071_2555287_-|hypothetical-protein
MSAARSARRPREVPGLRRSRTTATAPSPHTASSAGAAPGVVATACSTRPPSDRAREGRANSSATPTITSTT

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Crispr_ID: NZ_CP015726_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_3

3368275-3368384

Orphan

Consensus_repeat	Method
GCGCTGATCGAAGGCTTGCGGCCCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_3

>merge|NZ_CP015726|3|3368275-3368384|CRISPRCasFinder
GCGCTGATCGAAGGCTTGCGGCCCTTCACCGAGTTGAGCGATGAGATCGACCGCCGCACCGCGCTGAACAGACCGGACGGCTCTGCGTTGATCGAAGGCTTGCGGCCCTT

>NZ_CP015726|3|3|3368275-3368384|CRISPRCasFinder
GCGCTGATCGAAGGCTTGCGGCCCTT	CACCGAGTTGAGCGATGAGATCGACCGCCGCACCGCGCTGAACAGACCGGACGGCTCT
GCGTTGATCGAAGGCTTGCGGCCCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063735620.1\|3372849_3373407_-\|phage-gp6-like-head-tail-connector-protein	unknown	unknown	gnl\|CDD\|153446
NZ_CP015726.1\|WP_064273401.1\|3362174_3363197_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735616.1\|3375753_3376707_-\|HK97-family-phage-prohead-protease	unknown	unknown	gnl\|CDD\|309640
NZ_CP015726.1\|WP_063735617.1\|3374278_3375754_-\|phage-major-capsid-protein	unknown	unknown	gnl\|CDD\|273690
NZ_CP015726.1\|WP_063735629.1\|3363423_3363921_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_079152463.1\|3359781_3360462_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP015726.1\|WP_063735635.1\|3359494_3359728_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_159073677.1\|3363917_3364373_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735623.1\|3371129_3372116_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735618.1\|3373809_3374220_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735627.1\|3364387_3366685_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376716
NZ_CP015726.1\|WP_063735624.1\|3370622_3371120_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735632.1\|3361133_3362063_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|376556
NZ_CP015726.1\|WP_063735622.1\|3372118_3372325_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735619.1\|3373417_3373795_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735634.1\|3360458_3360755_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735633.1\|3360771_3361128_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735630.1\|3363213_3363414_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735621.1\|3372382_3372847_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735625.1\|3370166_3370610_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063735632.1\|3361133_3362063_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|376556	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.	2.1398e-17
NZ_CP015726.1\|WP_063735616.1\|3375753_3376707_-\|HK97-family-phage-prohead-protease	gnl\|CDD\|309640	pfam04586, Peptidase_S78, Caudovirus prohead serine protease. Family of Caudovirus prohead serine proteases also found in a number of bacteria possibly as the result of horizontal transfer.	3.00964e-28
NZ_CP015726.1\|WP_063735617.1\|3374278_3375754_-\|phage-major-capsid-protein	gnl\|CDD\|273690	TIGR01554, prophage_Lp3_protein_18, phage major capsid protein, HK97 family. This model family represents the major capsid protein component of the heads (capsids) of bacteriophage HK97, phi-105, P27, and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease. [Mobile and extrachromosomal element functions, Prophage functions].	5.06042e-58
NZ_CP015726.1\|WP_079152463.1\|3359781_3360462_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	7.89303e-07
NZ_CP015726.1\|WP_063735620.1\|3372849_3373407_-\|phage-gp6-like-head-tail-connector-protein	gnl\|CDD\|153446	cd08054, gp6, Head-Tail Connector Protein gp6 of Bacteriophage HK97 and similar proteins. The bacteriophage HK97 gp6 protein is critical in the assembly of the connector, a specialized structure that serves as an interface for head and tail attachment, as well as a point at which DNA exits the head during infection by the bacteriophage. It forms a dodecameric ring structure that comprises the middle ring of the connector, located between the portal protein (attached to the head) and the gp7 ring (attached to the tail). It is a component of the mature phage and the absence of HK97 gp6 results in defective head-tail joining and the absence of mature phage particles. Although the crystal structure of HK97 gp6 shows an unexpected 13-mer ring, the biological form present in the mature phage is believed to be a dodecamer.	8.0609e-06
NZ_CP015726.1\|WP_063735627.1\|3364387_3366685_-\|hypothetical-protein	gnl\|CDD\|376716	pfam02018, CBM_4_9, Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.	9.47729e-07

>NZ_CP015726.1|WP_063735627.1|3364387_3366685_-|hypothetical-protein
MMQLVVKAAFGYAVTDPSPVWTDISDRVHFPTGVSITRGASDELGETQAGTCSMVLDNSDGRFTSGRAASPYYPNVKKNTPIKVQVVTAKNLISNPSFESDLTGWIKTASPTIVQDNAHVQHGSQAMRITWGAPTGQAVGTVIDDLEIGQVYTASAYVWRAAGSPTLTLYILGMVATSVTAMTGAFERLTFTFTATATQHTLYVQTVSTPTAGTQCWVDAVQLEEGSVATAFDSSGFQTYDRFWGMVNDWPVTWAGLYSTVTITCTDIFKWLSRHPALSPMLTEEVLLDRPFVYYPLAEPSDSTSAGDLTGTASVGTLATVQAGSGGTLEFASGTGPPGSVAPLFTPVSATAGKYLTADLGPNFTDANVSFRMRMECWFSTTTAGRVIMAVTAADSSNKVIISLDSATGRLKIETAAAAASGNLVNATIDPTPNLADGQQHYLLYHELESVAYVDGVAYNVSNAGSMISMRVLSVGGYGNDRLWSGSISHVAIYLRSVTGAELTPHYTIGSTELVGEAADDRMSRITSYLPLAAVTTQGSTFDGMASQAALGRTPLDHLQEVAATESGKLLAARGGNGLVFQSRDVRYNPTASLSLDYADLETGDVALSDDDQKMLNTVIASRPGGATQRVVDQAARDTYGPYEQQVDLLKSSDLKVVDAANWLVSRYADPSPEIRQVPVQAYTLPMATYRALLAADVSTVLDLTGLPDQAPTPTATVTVEGYTELIQNKQHRLDLRTSRALTDTVWALDSAAYSQLGATTRLAY
>NZ_CP015726.1|WP_159073677.1|3363917_3364373_-|hypothetical-protein
MARPDPAPRRRVLRAEDFYQPPPDQPADAWALLAPAERAVRWFEQQAQRRLPRPPDGTDLGRPLFAQINHGRWIASCDECNSAQLVTPEDPRMYCVECLTPVWRRVRFPKDPAAVEADLAELPARERNWWHPDDEHAWNRPAQRPAEEERR
>NZ_CP015726.1|WP_063735629.1|3363423_3363921_-|hypothetical-protein
MTSTPRTWVVGETVTAALMNTEIRDQFNSIFGAWTSYTPTWTASTTNPVLGNGTLIGRYLKVGMTCTTQINLVTGSTTTYGAGNYSWALPFTSANAGCTYIGHAHLLAGPRWIGQFVISPASSTASPFFPSNSTTTTTVFMQPTVPVTLAAGHQLRITIQYETAS
>NZ_CP015726.1|WP_063735630.1|3363213_3363414_-|hypothetical-protein
MAMDYPYLMVSGLEGEMAINITVAVRSDTSKVTPQAIADLIRDYLQTIDGVENVTASRSEITQTSI
>NZ_CP015726.1|WP_064273401.1|3362174_3363197_-|hypothetical-protein
MPLPAGVETVTVSPGQPLTLPDGTLARGRITFTAPDLVTVASADFVTGGAVQLYITGGLFDDVTLVATDATGMSPTGWTYKVTVEFTEGGGWTRYISLPKNAPAVKLSDVLLTDPVEGQHAVLVDLAGVTAADVGADPAGAASTAMTTHVQAADPHGDRAYSDGVTGPIASRVTAVESGFTSVNAYITDALNRVQALENTRLTQAAGDARYLLLTGGTVNGAMQVVGLLSLGGGTTATTANAGTVVHAVLVSGDTFDRFRVYGDGKQEWGPGGNGARDTNLYRSAADVLRTDDTLHVTVNLRLNTTSMGGCVGASAWPTPRPRPPARRPAAGSSTRRAER
>NZ_CP015726.1|WP_063735632.1|3361133_3362063_-|N-acetylmuramoyl-L-alanine-amidase
MATPLSASAFLAALRAEGVRVQEHGSWRTHNRNAKGPWGGVHGVMIHHTVTRGTADTVAIVRDGYSTLPGPLCHGMIAKDGVVHLVGYGRANHAGLGDPDVLAAVIAERRPPTDDKATVDGNRVFYGFECENLGDGKDPWPEAQIEAIERVVAALCRVHGWGARSALRHLDWQPGKVDPRGPGMDWDSVLAAVAKRLGGKPPTTPLPSPTRPKVSLRELVEAAEHDPSAKGAPVTYSGTRIVEAALVDEGLLAKRYLDGHYGTATKDAMSGWQERCGYHGRKPGQPADGIPGKTTLTKLGKKHGFDVKD
>NZ_CP015726.1|WP_063735633.1|3360771_3361128_-|hypothetical-protein
MRILGREPALWLNSLSAVLGLLVTFQVGGLDAEEAGWIVASASAVLGAIAAALTRPIAVQAFTTAVATIASAVAAFGYEAAPTRTAAINAAVLSVLMFLTRGQVTPTLPGRPSGPTAV
>NZ_CP015726.1|WP_063735634.1|3360458_3360755_-|hypothetical-protein
MADEPTLGEVQRRMEQAFIDLKDDMRELGARLDSKVDQQVYDLRHEALAQRVSTLETLREKDAERIVATRRWLIGAVVVPLISVLLPVIIMLTRGVGS
>NZ_CP015726.1|WP_079152463.1|3359781_3360462_-|hypothetical-protein
MKRGLRAEERRQRRGDALAVAGAVLLGAVLAWIVLTVQQQGADLRTSNEARDALARQVQDMGGTPVAGKPGSRGDVGPTGQRGPRGPRGPTGSPGPSGSPGASGSDGTDGKAGQSGKPGSDGSPGPSGAAGQPGSAGADGQEGAQGEPGPAGPQGPAGPPGADGADGRDGSDGRDGQTCPDGYSLQPPPDDPDALVCRRDGAPQPQPEPTPGATAPAVLAPDRRRL
>NZ_CP015726.1|WP_063735635.1|3359494_3359728_+|hypothetical-protein
MDIPDRLIALQQTADDERAKLTGLDGDEHSAQWRRWFDAAATVQAAVTDHAREAGLSRSELEAAVKRAVRHPSGGDG
>NZ_CP015726.1|WP_063735625.1|3370166_3370610_-|hypothetical-protein
MIIVYAPDDGDEKRWDLKSARITAVEAEAVEMATNLEWEQVKNKVLHGSMRATRAVTWMLMKRDNPALRYTQFVPAAHELGYELDTDEMAVIRKEIENNPDLDEDERAATLAQLDAYERSDEEDPVSEADPKEVPKDLAVEASPTAA
>NZ_CP015726.1|WP_063735624.1|3370622_3371120_-|hypothetical-protein
MRDVRITGTGQLLNLSRDLRRAGGPRLQRNFARRIRRAAEPLKDDLQQAVRTVPVRGDGGRKRGGPSPTTRPLRATIAAAIRISVRTSGNPGARIWIDRAALPPDMRAMPNRLDEGRWRHPVYGNRRRWAAQYASPWWDVTIRRHTARMTAEVERVIDDVQRDLS
>NZ_CP015726.1|WP_063735623.1|3371129_3372116_-|hypothetical-protein
MAIGSGLGAQIGIAPETTYGTYVAPTKFIEFTKESVKLKKTTAQSAGIASGRLVALSSRRVVTQREVQGSIEMEVTTKSMGALLQALMGTTVTPVQQATSLAYLQTHTLADTAGKSLSIQKGVPMTTGTVMDYSALGCKVTSAEFSCEVGGMLTASFEVDGKTMDESQTLAAPSYPLMAPFHFGQMAVKTGAYGTETALDGIRKVSVKIERGMAVDRFYAGGGGLKAEPISNEMVKISGSLEADFTSATLATLFTSDAATSFVWEFVGDTIESTYKNTFRIKVPAIHIDDEPPSVEGTEIIRTTFAFTGLFDGTNATAIEYMSTDTTV
>NZ_CP015726.1|WP_063735622.1|3372118_3372325_-|hypothetical-protein
MASVRLIAPEPRIVPWLGPEVVVQPDQVVEVPDAHADSYTCQPDVWELVGEPKKTTAAPKSRSPKEGD
>NZ_CP015726.1|WP_063735621.1|3372382_3372847_-|hypothetical-protein
MSTSAVPAAVDALLEILRAAPGLADARVVDGPPSTNLTDRKYVFVGWQPGAEAAVAIEQDFASAGARRRDESFEISCYAETRSGDKDMAVQRAAVFELVAAVEDALRATDAAPAAPTLGGTVLWAHLTTGSLTQVQSEGTVAGLAFTVTCRARI
>NZ_CP015726.1|WP_063735620.1|3372849_3373407_-|phage-gp6-like-head-tail-connector-protein
MALLTLEDAKAQLDIDGVRDDVELQAYIDSLTAVIERYVGPVENRSVTETINGRGASLCLTQVPVVSLTSLTPVLTGGGPIAVDDVVVDPATGVLRRRDGGAFYGGPWTALYTAGRGSVPPTINLAARLLLQHLWRTQYGASRGLGTVGGGDDFSVTEPVPGFGYAVPNRVLQLLEPYRLPPGVA
>NZ_CP015726.1|WP_063735619.1|3373417_3373795_-|hypothetical-protein
MAIKRCNSAFSVWVNGVPVVYSAGQLIEDTDPVFKTHRAYFEDVETVARPRKATVHKAEQATAEPGENRSLTPPTAVPEPSDDGTAKKSQDEDERPAQDDDATGDRPRTTRRTGTSTAKRGRSTK
>NZ_CP015726.1|WP_063735618.1|3373809_3374220_-|hypothetical-protein
MRQSLYTMCRAKATLAIALRTNGTVNGTTVDLHENKDASRSAMLIVQSGTITDGSHAVTLQESDDGSSWGTVAAADLQGSAPTVTSTDDDALFELGYKGVKRYLRAVVTTSGATTGGTLGAVILRGFPRRVPITRS
>NZ_CP015726.1|WP_063735617.1|3374278_3375754_-|phage-major-capsid-protein
MELSHPQAVIRLKDIKDELERLGNKTDLTAEDEQQFDELTREFGEVDAHRRHLERKAALDRVRSAASVTERRRPAALSVEGGSPMGGADGYDADPILNPDSVEDARFRNPWDLSEVRTFSRSPEEVGQELRARALCAIERMKGANDSVRSTATEILEAWDDKKGTIARMCLATSSPEYLRAWSKLARGKGHMVSVEEQKALERAMSLTDSAGGYLVPFQLDPTVIITSNGSRNQIRQVARQVVATGDVWNGVSAGAVSWRWAAEGSEASDNAPTFSQPTVPVYKADGFVPISIEALEDEANVTTEVGRLLAFGKDSLEAAAFTTGSGSGQPTGIITALTGTSSIVTSTTTDTFASGDVYKLDGALPARYRPNAAWLANRNIYNLVRQFDSSGGTNLWERIGADVPPMLLGRPALEAEDMDGVVNATQENYVAVYGDWENYVIADRVGMTVEFIPHLVGANRRPTGQRGWYAYYRVGADSVNDGAFRMLNVT
>NZ_CP015726.1|WP_063735616.1|3375753_3376707_-|HK97-family-phage-prohead-protease
MMGTLQSVARDVQRSAPFRLVRSADEAEGDGRSLTGYAAVFGQPTEIDSWEGRFTETIRKGAFRKSIRENTPVMQYDHGRHPLIGSIPIGRIENLREDDEGLFTEARLTDNWLIQPVRDAIAEGSISGMSFRFEVVREEWRDVNGKLVKPEEVLDLLWMPGDRGPLQRELIELKVRELGPVCWPAYAGTSVGVRARDMAEGILHSDDLTRQIRRSLARDAAVPQVPEDPELRREVAAALLSRTDAPPEEGHPSGPDTPQDGAPPEEGHPPQHDDPDAPPADGHPSQPARANPLRDQIREITGLMGETLALIDTKDNS

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Crispr_ID: NZ_CP015726_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_4

3775010-3775113

Orphan

Consensus_repeat	Method
TGCTCTGCCAATTGAGCTACAGGGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_4

>merge|NZ_CP015726|4|3775010-3775113|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGACCGAGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGCTGCTCTGCCAATTGAGCTACAGGGGA

>NZ_CP015726|4|4|3775010-3775113|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGA	CCGAGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGC
TGCTCTGCCAATTGAGCTACAGGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_009718110.1\|3775317_3775590_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_159073615.1\|3769817_3769988_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063734357.1\|3775615_3777067_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|198375
NZ_CP015726.1\|WP_063734349.1\|3786910_3787594_+\|DUF218-domain-containing-protein	unknown	unknown	gnl\|CDD\|225500
NZ_CP015726.1\|WP_063734353.1\|3783684_3784464_-\|sirohydrochlorin-chelatase	unknown	unknown	gnl\|CDD\|225049
NZ_CP015726.1\|WP_159073614.1\|3770252_3770780_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063734355.1\|3780775_3782071_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
NZ_CP015726.1\|WP_107451135.1\|3764808_3765435_-\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|319260
NZ_CP015726.1\|WP_107451134.1\|3786224_3786836_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP015726.1\|WP_063734363.1\|3767214_3768132_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223109
NZ_CP015726.1\|WP_063734360.1\|3770786_3771560_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063734362.1\|3768142_3768433_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063734458.1\|3777073_3778390_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|235640
NZ_CP015726.1\|WP_079152294.1\|3771548_3772508_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377856
NZ_CP015726.1\|WP_063734354.1\|3782305_3783688_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|235098
NZ_CP015726.1\|WP_063734358.1\|3772995_3774582_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP015726.1\|WP_079152292.1\|3785053_3786103_-\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NZ_CP015726.1\|WP_063734356.1\|3778773_3780705_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP015726.1\|WP_063734361.1\|3768513_3769653_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|319251
NZ_CP015726.1\|WP_159073616.1\|3765629_3766496_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214500

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063734349.1\|3786910_3787594_+\|DUF218-domain-containing-protein	gnl\|CDD\|225500	COG2949, SanA, Uncharacterized membrane protein [Function unknown].	6.26382e-59
NZ_CP015726.1\|WP_063734353.1\|3783684_3784464_-\|sirohydrochlorin-chelatase	gnl\|CDD\|225049	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism].	3.78076e-29
NZ_CP015726.1\|WP_063734355.1\|3780775_3782071_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	2.99184e-68
NZ_CP015726.1\|WP_107451135.1\|3764808_3765435_-\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|319260	cd16403, ParB_N_like_MT, ParB N-terminal-like domain, some attached to C-terminal S-adenosylmethionine-dependent methyltransferase. This family represents domains related to the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system, fused to a variety of C-terminal domains, including S-adenosylmethionine-dependent methyltransferase-like domains. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	1.47188e-10
NZ_CP015726.1\|WP_107451134.1\|3786224_3786836_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.51015e-13
NZ_CP015726.1\|WP_063734361.1\|3768513_3769653_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|319251	cd16393, SPO0J_N, Thermus thermophilus stage 0 sporulation protein J-like N-terminal domain, ParB family member. Spo0J (stage 0 sporulation protein J) is a ParB family member, a critical component of the ParABS-type bacterial chromosome segregation system. The Spo0J N-terminal region acts in protein-protein interaction and is adjacent to the DNA-binding domain that binds to parS sites. Two Spo0J bind per parS site, and Spo0J interacts with neighbors via the N-terminal domain to form oligomers via an Arginine-rich patch (RRXR). This superfamily represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	1.37717e-39
NZ_CP015726.1\|WP_063734357.1\|3775615_3777067_+\|sugar-kinase	gnl\|CDD\|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	2.64876e-115
NZ_CP015726.1\|WP_063734458.1\|3777073_3778390_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	1.265e-165
NZ_CP015726.1\|WP_079152294.1\|3771548_3772508_-\|hypothetical-protein	gnl\|CDD\|377856	pfam07508, Recombinase, Recombinase. This domain is usually found associated with pfam00239 in putative integrases/recombinases of mobile genetic elements of diverse bacteria and phages.	3.96552e-11
NZ_CP015726.1\|WP_063734354.1\|3782305_3783688_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP015726.1\|WP_063734358.1\|3772995_3774582_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.89167e-20
NZ_CP015726.1\|WP_079152292.1\|3785053_3786103_-\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	8.13393e-155
NZ_CP015726.1\|WP_063734356.1\|3778773_3780705_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP015726.1\|WP_063734363.1\|3767214_3768132_-\|hypothetical-protein	gnl\|CDD\|223109	COG0030, KsgA, Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis].	9.79047e-08
NZ_CP015726.1\|WP_159073616.1\|3765629_3766496_+\|hypothetical-protein	gnl\|CDD\|214500	smart00065, GAF, Domain present in phytochromes and cGMP-specific phosphodiesterases. Mutations within these domains in PDE6B result in autosomal recessive inheritance of retinitis pigmentosa.	0.00196224

>NZ_CP015726.1|WP_063734358.1|3772995_3774582_+|site-specific-integrase
MFNPNYYRRCACKAPALDAAGEPILNDDGSPKMRMLGASCPKLTQKGHGTWYFYFELEAGEGGKRQRVRRGGFATKDDAKTKATEVYRNVIGGTDVLSNATVGEDLRHWLKRKKSLARTTLHGYEEHVTLYLEPHLGHIKRRDLKLRHIEAMYDAIERENAERLLHHAKVVELQEARDAAHTAWIRTAGKKTARRLTRRLYLEANAALREGRKGKRKITSAATMHRINATLSSFFGSGIKRGEYSANLAALVELPAVKRPKALVWTPERVEDWKRTGKKPSPVMVWTPEQTGEFLDFVSDDRLCAMWHAFIFRGPRRGEMCALPWPEVSLTGSWFRISAQIVEIAYRQYDEAPKQDSVRTVTLDSQSRELWKEWQATQAKERERWSGEKAWVETNRVWTHENGEPLHPDWISRRFTRLVELSGLPPIRLHDTRHLSATLALLGKADIKVVQERLGHSSRQITSDTYTSVLPQLLTAEAESTIAVVPRTRKKGTGKGKRTQPKDQTTAGPEAKRGAEKSGPDEDLRPAA
>NZ_CP015726.1|WP_079152294.1|3771548_3772508_-|hypothetical-protein
MPRLFGFADTSRRRLHDDEVDPLRQMVSRALAGQSNADVAVWANGEGYRGTLGGEWKDASVGRLFRNPAIAGLRYDENGELVDAGHPGAIEREEFEALQEREQSRKTADADPPYDYLLVGGASTCGNCTHVLQGARTNAGTPGYRCRPKDKDGRGGCGEVRMDAELLENHVGEYVVAELLKPGVRDQILKAQAAVREQVAKINQEIKDLEVRRTEAGTLYGKRQISSDSFVAADREITANLKAARSRLRYAEQMANFSLGSAKDLVRWWNTAPTASKKAIVTLLLENVEVFPASARGIRTVEPGRVVLHWRTLSSLSGG
>NZ_CP015726.1|WP_063734360.1|3770786_3771560_+|hypothetical-protein
MDGIVFGLCALFGLAGTVLSAREAWRQRIRNEYHIARFARTVAFGVCTLGVLLAVPPIEDFFESATGMNNAAKLGAHICAVLWCGSLQLMLVDWSYNQDVLKASLYARIAFAVCVLAAMLPLFIETTGESIEFTTEYAAAPGVTVYLMVYLAYVAITCGEIAFLCSGMALSARRGGHMWSARGLAMSATAALLGVAYAASKGSYLVTHYLGHPWPLRDEEIVSPVLAGLAVMSLITGLTMATVGKRLAARKAAASAA
>NZ_CP015726.1|WP_159073614.1|3770252_3770780_+|hypothetical-protein
MPLGPDTPLSSKLAVLLGRKRGADGKTPSTRAIAAATAETPEGKPAMTHQVVNDLLNGAKANPQVSQLLGLARAFECPAAYLLPGYNGLTSLSVYEEHQDAREALRLVHDLGEAGAAELLEAAREIRLRHGHSDLNVPEVPEPLPPAAEPPRPGRRRRLSFTEAAERAVADLEGT
>NZ_CP015726.1|WP_159073615.1|3769817_3769988_-|hypothetical-protein
MGIELERVLARLEESDGTENVVMDERVAYEVLGALAVVDPERVGCRTECLSGVAAS
>NZ_CP015726.1|WP_063734361.1|3768513_3769653_-|ParB/RepB/Spo0J-family-partition-protein
MHKYAALKMRQIRRNPNQPRKTFSEEALQELVDSIKEHGLLQPIVVRKVEEGGYELVAGERRFRANELAGNITIETKILLPEADAEISDMESFKKAMAENLNREDMLPLEEARGFKKVLDEEEDATVASVAKTFSKSIQYVNQRLALLALRPEIQTAVDLGHIGTQAAVQIAALSRDNQKAVFEDWKKGNKSDNQLVHIAYAMRKQETAAKQDSMVDVEEITPEEKAERSRTQAKTKSDLDEIERMCELLDNIGKADPMELARALEGQVGKRLEQMDRVANFVQKARFQLRQAKAHADASEIMVNPDAAAPDLVAEADAALAQLEPKADAAPQAETGPVTAPQDEAAPEPENTPAADMESENEADAEEGDTQPKPVVAA
>NZ_CP015726.1|WP_063734362.1|3768142_3768433_-|hypothetical-protein
MRNINRNLFQVPASADALEEYDSDAAELVRAAAQHLYKARRDHDQAALDEASNLTIHAAAHLLNQAGGSVYVRFPIMLTARLVELEAALLATTANE
>NZ_CP015726.1|WP_063734363.1|3767214_3768132_-|hypothetical-protein
MQIDPDTLDVIRAATVDGSALRLPGQLDPKLYKRVDLALSVVGGKWHRYKRAHIFPIAAADAIAELLATGEVITDGDRGYYPTPEPVVEQLLELADLEPGCEVLEPSAGRGAIAEPAAARGAIVDCIELDQGRAEHIRAGGYARSVTNADFLSMKVERRYQRVIMNPPFADRQDIRHVERALRFVQPGGLVVAVMFGSLSFRTDRLTKDFQARVREARGIIMALPDNAFPVVGVRTVIAVIPVREAPPAPRVHLSAPRPEHFTERPRAVQQDLFITDGPTGHRTAALDGFGYGAAPDGGASQQPK
>NZ_CP015726.1|WP_159073616.1|3765629_3766496_+|hypothetical-protein
MAWRDLRKKLLDALTKAPKRAVKFASISSGLAFWPLGIIATLVSGSWKFALASLAAVCYALNWAAGRIENAAAHKEALRAADEARQEEAKARAIEADFNVTVQQTLVPWVRELEAALDEPLKGRAAHIGAAKTIILQGLVSSLSHTLKGGAKRCLRACYFKLDSPGELISDAIAGRASEPRHRFAKGTEEGDYVFDRLERGERYLISKDDTGDAPLPKFGNYHAFISVPIATKSKLLGMLTVDSTEPDVLQKSDINYVRAMAGLLAISLKQGPATQGTRKAGTAPPVA
>NZ_CP015726.1|WP_107451135.1|3764808_3765435_-|ParB-N-terminal-domain-containing-protein
MPLAVPIGDLAPYHRNPRTGDIPSIAESLTANGQYRPVVVNKGTHTGRPNEILAGNHTVAAAQQLGWEQIAATWVDVDDDAAARIVIVDNRTNDLAGYDTALLAEVLSEIPDLTGTGYDRESVDRLLDDTSLPESLELTSDGAGTGAVAAVDFLQWGYLQWESKRVRITSEEVEALNAIYTKFVDDTNSDLGFGWHVLQQAYQEGELA
>NZ_CP015726.1|WP_009718110.1|3775317_3775590_+|hypothetical-protein
MRYRLTFMTGLAVGYVFGTRAGRERYEQLRACAQRLAQNPAVRNTAESAALGGREAATKALGKVRPLRDKIAQRESRSAAEEDDWGTSNT
>NZ_CP015726.1|WP_063734357.1|3775615_3777067_+|sugar-kinase
MGIVAGLDSSSESTRIVVCDTDTGAVLKQGYAPHPAPSSGGSPNDVDPQAWLLSLGEAAEGGLLEGVQAIGVSAQQHGLLALDGNGALVRPAQMGNDRRVQSAAADLIETLGGRAVWAQAVGAVPTAAQAVAKLRWMARSEPDAARRVAEVLQPHDWLVWQLLGRPLRRTTDRGTASGTGYWSAATGAWRPDLVELALGHQVRLPEVIGPAQAAGQTPEGLLISAGTGETMAAAFGLGVGVGDAVISLGASGSVFSIHHEALADHTGTILSYADATGMHLPVVHTLNAVRALRGTAELLGTDLEGLSALALKSTPGSYGMVMLPYLEGERTPYLPHTAGTLSGLRRESMKPEHLARAAFEGMLCGLGDALDILRGRGVGVRRVFLLGPAADLQAVRAIAPALLGAQIVVPQPADYAALGAARQAAWALGAAQGTLSPHEPPRWPAAASQVFEPGDDLAVGQAVRQQYVAVREQTHPGAFEAQP
>NZ_CP015726.1|WP_063734458.1|3777073_3778390_-|RNA-polymerase-sigma-factor
MYGTDGGVAGASVPDRSAASAAITLEVAPVQTQTLTDAAPVAPPNPLAPSAAEPPEPPPLPDAARAPEPPDAPEPPEPPEPPEPPDAADTRPSDQDPETADTETADTEADAEPDTEPDAEADSGPAERPARAETTGPSSDLFRQYLREIGRIPLLSAAEEVELARRVEAGLFAEEKLASAPDLDSQLALDLDRLVVLGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAIHLDLTPERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
>NZ_CP015726.1|WP_063734356.1|3778773_3780705_-|DNA-primase
MAGRINDDDVRAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQISPSKGLYYCFGCQEGGDTVDFVMKIDHLSFSETIERLASQAGITLRYEQGSATPGRQQGERTRLVEAHRAAAQFYVEQLDGPEAEIGRKFLAERGFDQAAAQHFGVGYSPAGWDHLVRYLRGRGFTDRELTLSGLAQDGRRGPIDRFRGRLMWPIRDITGEVVGFGARKLRDDDNGPKYLNTPETPLYKKSHVLYGIDLAKKDIAKTSRAVVVEGYTDVMACHLAGVTTAIATCGTSFGGDHIKILRRLLMDNSGAEVVFTFDGDAAGQKAALRAFEDDQKFAAETYIAITPGGMDPCDLRLAHGDGAVEALVESRTQLFEFAIRQIVARHNLDTAVGRAAALDEAAPVVAGIKNSSIQHESAVHLAGLLGILDTQFVVQRVSQLARWARDRGRGGDQRPDQRGRPQHRGAGPGGPGGPQGPAAPAGPRGPALNLRSPAHRVERELLKLALQRPELVSPAFDAYGEDEFTAAPYAAVRRAVEDAGGAEAADADYLRRVREAAPDDTVRAMVTELAVEPLHTRREADEAYAGEQLVRVRQAAVNHRITEVQGTLQRLGQRADPAHLAAVQNELWVLQQYAQSLQTQGAAAL
>NZ_CP015726.1|WP_063734355.1|3780775_3782071_-|FAD-dependent-oxidoreductase
MVDAHQTFVIVGGGLAGAKAAETLRSEGFTGRVILICDERDHPYERPPLSKGFLTGSQERDSVFVHEPAWYAQADIELHLGQPATHLDRDAKAVTLGDGTRIHYDRLLLATGAEPRRLDIPGTGLVGVHHLRRLAHAERLKGVLAGLGRDNGQLVIAGAGWIGLEVAAAARGYGAEVTIVEPEPTPLHSVLGPELGALFADLHSEHGVRFHFGARLTEITGQDGVVLAALTDDGEEHPCHSVLAAIGAAPRTALAEAAGLEVVDRASGGGIAVDAALRTSDPHIFATGDAASAPLAFLEGTPARGALPPGARLRVEHWANALNGGPAAARAMLGQDVSYDRVPYFFSDQYDVGLEYSGYAPPGSYDQVLIRGDVGKRQFIAFWLSDGRLLAGMNVNVWDVTGPIQQLIRSGAQPDPGALADPSVPLTSLLP
>NZ_CP015726.1|WP_063734354.1|3782305_3783688_-|deoxyguanosinetriphosphate-triphosphohydrolase
MSRRAGRTTGHTTNHSTAPPTTPGYDAADLERWVQEPDKRPGRTAFQRDRARVLHSAALRRLAGKTQVVPAAPATDLGPAARTPAWDATPRTRLTHSLECAQVGRELGAALGCDPDLVEMACLAHDLGHPPFGHNGEQALNEVAGDCGGFEGNAQSLRLLARLEPKRFVPDEETGEPVSVGLNLTRAALDAATKYPWPRGGHPRDPESPKFGVYEDDLPVFAWFRRGAPDQRTPFEAQVMDWADDVAYSVHDVEDGLHAGHLDPNSLLAEPERREVFAVAAARYAPGAEAEELAEALDRLLDQEWWPHGYDGTSVAQARLKDATSQLIGRFCLAAEAATRAAYGAGRFTRYRAELVVPRPARLECAVLKAVADRYVIQRADQELVRADQRVVIAELGEALIARAPDGLDPQFHALFDAADAAGDETGRLRAIVDQIAALTDASARSLHARLTAPRSVRHV
>NZ_CP015726.1|WP_063734353.1|3783684_3784464_-|sirohydrochlorin-chelatase
MTASLRPVPSGRPTGKRPPTLVAVAHGSRDPAALRTVTALVNAVRALRPDVPVRLGHIELNRPLLEDTLAALRGEAVLVPLLLGRGYHVKEDLPAAAARAAHLTTRIAAPLGPHPLLAEALHARLNEAGRRLRAPHRPGAVVLAAAGSRDPDAAVDAAATATLLGARLGGVPVVPAYASAAGPTVADAVRALAPHHRDIAVASYFTAPGRFATQCADAAPGVAAAPLGAHPAVARLVLHRYEQALACAPLSYRAVTVGV
>NZ_CP015726.1|WP_079152292.1|3785053_3786103_-|adenosine-deaminase
MCPIPHSLGGSSRTSENQQVIPAVPPLPKAELHLHIEGTLQPELAFALAERNGVELPYATQDELRAAYSFTDLQDFLNLYYALMAVLRTEDDFADLADAYLARAREQGVRHAEIFFDPQAHTARGVDIGTVIRGLTRALDAAPRTHGITTRLIMCFLRDESAESALATFESARPYLDRITAVGLDSAEVGHPPSKFREVYALAREAGLKCVAHAGEEGPPAYVWEALDILGVDRVDHGVRCLEDDALVARLVADQVPLTVCPLSNVRLRVVDQLADHPLPAMLDAGLLVTVNSDDPSYFGGYAEDNFTAVRDALGLDRAALRTLARNSFRASFLDEETRAAYLKELDAS
>NZ_CP015726.1|WP_107451134.1|3786224_3786836_+|Uma2-family-endonuclease
MTTDTPGAEEPLKGFDDLLRTTEELDTPDGFKAELIRGKIVVSPWSGLKYLWPMRELRLRLEPHAPKGHIAETSPFLFTFPSAERAFGPDLFVAAGSAFRGPQGRHADSEALSLVAELTSVSTRDVDWQEKLEVYGRHVPVYLVLDMRAEEVTAFWDPSDHGYRAHMTVPFGKPLPIPAPFDFELETDIFLTSEEPEEDDAAE
>NZ_CP015726.1|WP_063734349.1|3786910_3787594_+|DUF218-domain-containing-protein
MLGWARRRFPRTRRGRRRAFQVAVLVSVLALLPATWLRLSTEGRVRAAIGDAPSAPVGVVFGAGLWNGEPSPYLAHRLDAAVALYRDGKVRALLVTGDNSRDDYDEPNAMRAYLVKRGVPDRRIVSDFAGFDTWDSCSRARRVFGVHRAVLVSQGFHIRRAVALCGAAGIDAYGVAVDEPHDATWGFGGLRETVAASKAVLDATFRPDPHFLGPRERGISDAVAADG

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Crispr_ID: NZ_CP015726_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_5

3985541-3985660

Orphan

Consensus_repeat	Method
CCCCAGCAGCCGGGTCCGTACGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_5

>merge|NZ_CP015726|5|3985541-3985660|CRISPRCasFinder
CCCCAGCAGCCCGGTCCGTACGGACAGCAGCCGCAGCCCGGCTACGGTCAGCCGCAGCCCGGTCAGCCGGGTCAGCCCCCGAACCCGTACGGCCAGCCGCAGCAGCCGCCGTACGGACAG

>NZ_CP015726|5|5|3985541-3985660|CRISPRCasFinder
CCCCAGCAGCCCGGTCCGTACGGACAG	CAGCCGCAGCCCGGCTACGGTCAGCCGCAGCCCGGTCAGCCGGGTCAGCCCCCGAACCCGTACGGC
CAGCCGCAGCAGCCGCCGTACGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063734169.1\|3981697_3984331_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP015726.1\|WP_063734172.1\|3972190_3974338_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|274573
NZ_CP015726.1\|WP_039941924.1\|3988927_3989584_-\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|237133
NZ_CP015726.1\|WP_063734160.1\|3992510_3992705_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_079152278.1\|3984413_3985400_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370676
NZ_CP015726.1\|WP_063734162.1\|3990549_3992001_-\|trigger-factor	unknown	unknown	gnl\|CDD\|234956
NZ_CP015726.1\|WP_039941926.1\|3976258_3977278_-\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|237562
NZ_CP015726.1\|WP_063734170.1\|3978454_3979975_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|223362
NZ_CP015726.1\|WP_009717936.1\|3978099_3978453_-\|DUF4233-domain-containing-protein	unknown	unknown	gnl\|CDD\|379420
NZ_CP015726.1\|WP_063734440.1\|3974438_3975158_-\|rod-shape-determining-protein-MreD	unknown	unknown	gnl\|CDD\|274574
NZ_CP015726.1\|WP_079152276.1\|3997072_3997885_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP015726.1\|WP_079152307.1\|3994565_3996995_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NZ_CP015726.1\|WP_063734150.1\|3999495_4000305_-\|Fpg/Nei-family-DNA-glycosylase	unknown	unknown	gnl\|CDD\|223344
NZ_CP015726.1\|WP_009717937.1\|3977596_3978010_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_CP015726.1\|WP_063734158.1\|3993302_3994484_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|226122
NZ_CP015726.1\|WP_009717939.1\|3975164_3976106_-\|rod-shape-determining-protein-MreC	unknown	unknown	gnl\|CDD\|237560
NZ_CP015726.1\|WP_063734151.1\|3998012_3999158_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP015726.1\|WP_009717929.1\|3987457_3988744_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
NZ_CP015726.1\|WP_009717942.1\|3970991_3972194_-\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
NZ_CP015726.1\|WP_086015815.1\|3989645_3990248_-\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|178955

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063734169.1\|3981697_3984331_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP015726.1\|WP_063734172.1\|3972190_3974338_-\|penicillin-binding-protein-2	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP015726.1\|WP_039941924.1\|3988927_3989584_-\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|237133	PRK12553, PRK12553, ATP-dependent Clp protease proteolytic subunit; Reviewed.	3.81004e-125
NZ_CP015726.1\|WP_079152278.1\|3984413_3985400_+\|hypothetical-protein	gnl\|CDD\|370676	pfam09770, PAT1, Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.	8.20208e-07
NZ_CP015726.1\|WP_063734162.1\|3990549_3992001_-\|trigger-factor	gnl\|CDD\|234956	PRK01490, tig, trigger factor; Provisional.	3.86335e-155
NZ_CP015726.1\|WP_039941926.1\|3976258_3977278_-\|rod-shape-determining-protein	gnl\|CDD\|237562	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional.	0
NZ_CP015726.1\|WP_063734170.1\|3978454_3979975_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	2.83732e-139
NZ_CP015726.1\|WP_009717936.1\|3978099_3978453_-\|DUF4233-domain-containing-protein	gnl\|CDD\|379420	pfam14017, DUF4233, Protein of unknown function (DUF4233). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 122 and 147 amino acids in length. Proteins in this family are integral membrane proteins.	1.52227e-22
NZ_CP015726.1\|WP_063734440.1\|3974438_3975158_-\|rod-shape-determining-protein-MreD	gnl\|CDD\|274574	TIGR03426, shape_MreD, rod shape-determining protein MreD. Members of this protein family are the MreD protein of bacterial cell shape determination. Most rod-shaped bacteria depend on MreB and RodA to achieve either a rod shape or some other non-spherical morphology such as coil or stalk formation. MreD is encoded in an operon with MreB, and often with RodA and PBP-2 as well. It is highly hydrophobic (therefore somewhat low-complexity) and highly divergent, and therefore sometimes tricky to discover by homology, but this model finds most examples. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	4.65071e-14
NZ_CP015726.1\|WP_079152276.1\|3997072_3997885_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	2.63998e-110
NZ_CP015726.1\|WP_079152307.1\|3994565_3996995_-\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	2.71855e-13
NZ_CP015726.1\|WP_063734150.1\|3999495_4000305_-\|Fpg/Nei-family-DNA-glycosylase	gnl\|CDD\|223344	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair].	1.27035e-65
NZ_CP015726.1\|WP_009717937.1\|3977596_3978010_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	5.88459e-75
NZ_CP015726.1\|WP_063734158.1\|3993302_3994484_+\|acyltransferase-family-protein	gnl\|CDD\|226122	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism].	1.34718e-29
NZ_CP015726.1\|WP_009717939.1\|3975164_3976106_-\|rod-shape-determining-protein-MreC	gnl\|CDD\|237560	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional.	4.49697e-64
NZ_CP015726.1\|WP_063734151.1\|3998012_3999158_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	2.24301e-35
NZ_CP015726.1\|WP_009717929.1\|3987457_3988744_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
NZ_CP015726.1\|WP_009717942.1\|3970991_3972194_-\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	1.29139e-123
NZ_CP015726.1\|WP_086015815.1\|3989645_3990248_-\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	8.07056e-119

>NZ_CP015726.1|WP_079152278.1|3984413_3985400_+|hypothetical-protein
MFRTCHAASRRGTMSYQQPPPQPGPYGAQPGPHGAGQPPVPNPYAQPSGYGHPQPAQPGQPGGYAAPPPYNGGGPYGSPANPYAQQPPQGPQPGQPGQPGQPQQGFYGGQPTPPAAPGGRGKGRTIGMAVGALAVVGALTAGGFLLFGGDSGPYKLTTPKTVAEEYQRQGSGTDDGDLSAAGKKDLQQVPVVKDPHLVAADYQTDGKEMLKFTGVWGEVTDPERGADLALAVIVKALQDNGTAQAKGTPQEFSPDGFDGDVMKCQSLKFTSDQGSMEAPACVWGDKSTLGVAVMADPAGAVLGGSMSLEDAAELTAKVREDARVEIDN
>NZ_CP015726.1|WP_063734169.1|3981697_3984331_-|valine--tRNA-ligase
MTENSQQRPDSGPNSHPELPTQYAPADVEGQLYERWVERGYFEADAKSGKDPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGFETLWQPGMDHAGIATQNVVERELAKEGVSRHDLGREAFVERVWQWKGESGGQISGQMRRLGDGVAWNRERFTMDDGLSKAVQTIFKKLYDDELIYRAERIINWCPRCLTAISDIEVEYQDDDGELVSIRYGEGDTAIVVATTRAETMLGDTAVAVHPDDDRYRHLVGTEIELPLTGRRIPVVADEHVDPEFGTGAVKVTPAHDPNDFEIGQRHGLPNLSVMDEHAVITAHGPFQGLDRLEARSAIVGALRAEGRIVAEKRPYAHSVGHCSRCKTTIEPRLSMQWWVKVGPLAKEAGDAVRDGRVKIHPEDMSKRYFDWVDNLHDWCISRQLWWGHRIPVWYGPDGEVVCVGPDEEPPSGEGWTQDSDVLDTWFSSGLWPFSTLGWPEQTDSLAKFYPNSVLVTGYDILFFWVARMMMFGLYAMDGTPPFHTIALHGMVRDQFGKKMSKSFGNAVNPLDWMDAYGSDAVRFTLARGANPGVDVPIGEDWVQASRNFANKIWNATRFALMNGATVEGELPAPERLSATDRWILSRLNEVVADVDAFYDDYQFAKLSDTLFHFAWDEVFDWYVELSKTTFQKGGAEADTSRRVLGEVLDVTLRLLHPVVPFVTEKLWTSLTGQESVVIADWPKDSGFRDEAAEREIENLQQVVTEVRRFRADQGLQPGQKVPARLELSGTSLAAHEDAMRSLLRLQPAGEDFTATASLPVAGATVALDLSGVIDVEAERKRLAKDLAAAEKEKAQTTAKLSNEGFLAKAPDHVVEKIRVRQTTAEADIARITAQLASLPQG
>NZ_CP015726.1|WP_063734170.1|3978454_3979975_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MSERPQNEPDEQNESDEFDEIVGAETDRDPDLAVIEAGSRTLRAQSGPPEGDGIPARPSDPEVDRALREVEAELATRWEETKLDPSLVRIEGLLDILGSPHRAYPSIHITGTNGKTSTARMIEALLGSFELRTGRYTSPHVQSVTERISLDGAPISAERFIETYQDIAPYIEMVDARQEYRLSFFEVLTGMAYAAFADAPVDIAVVEVGMGGSWDATNVIDSDVAVIMPISLDHTDRLGTTPEEIAAEKSGIVKQDATVVLAQQPVEAASVVLKRAVEVDATVAREGMEFGVVSREVAVGGQLLTLRGLGGEYPEIFLPLHGAHQAHNAAVALAAVEAFFGVGSQHARPLDLDTIRSAFASVSSPGRMEVVRRSPTVVLDAAHNPGGARAAAEAVTEAFDFSRLIGVVGASDGKDVRGLLEAFEPIFAEIVVTRNSSHRAMDADELAGLAVEVFGADRVQVEPRLDDALEAAITLAEEEGEYAGAGVLVTGSVITVGEARLLLGKG
>NZ_CP015726.1|WP_009717936.1|3978099_3978453_-|DUF4233-domain-containing-protein
MRTLCASTLIGEFFVIGFAGLVAMKVSGLSMGTVWTVCGIAMALCVLLCGMLSRPGAVQIGWALQIGLVLSGFVVTTMFFLGVVFAALWWASVHFGRKVDQAKERFAAASAASPDAA
>NZ_CP015726.1|WP_009717937.1|3977596_3978010_-|nucleoside-diphosphate-kinase
MSQRTLVLLKPDAVRRGLVGEILGRIEQKADWTISALELRRLGRELLEQHYAEHVGKPFYEPLVEFMSSGPAVALVVEGERVIEGVRALAGPTDPIAAAPGSIRGDFGTIVRENLIHASDSEESAEREIKIFFPGLA
>NZ_CP015726.1|WP_039941926.1|3976258_3977278_-|rod-shape-determining-protein
MSFIGRDMAVDLGTANTLVYVRGRGIVLNEPSVVAINTNTGGILAVGAEAKKMIGRTPGNIVAVRPLKDGVIADFEITERMLRYFILKIHKRRYLARPRVVVCVPSGITGVERRAVIEASTQAGARQVHIIEEPMAAAIGSGLPVHEATGNMVVDIGGGTTEVAVISLGGIVTAQSIRVAGDELDNAIIQHIKKEYSLLLGERTAENIKITIGSAFESEEEEHTEIRGRDLVSGLPKTVVISAAEVRKAMEEPVNSIVDAVKTTLDKCPPELSGDVMDRGIVLTGGGALLRGLDERLRRETGMPIHIAEDPLDSVALGSGKCVEEFEALQQVLDAQPRR
>NZ_CP015726.1|WP_009717939.1|3975164_3976106_-|rod-shape-determining-protein-MreC
MRDTRESRLLLVLLIAIAFALITVDIRGGEDSPLDGARQAAASAFGPVEGGVASAVDPVGNAVAAIRDSDTRHNRISQLEQENTRLRQRLGSDDRNRARSVELDKLRRVAGTGQYGIKGAEVIGIGASQGFSWTVTLDVGSDDGIQRDQTVINGDGLVGRVTTVGPTTSTVLLAIDPDFTVGTRMEKSSELGFATGRGDRSLHVQLLNGKAKIKKGDRLVTFGSQADKPFVPGVPVGKVVRVDPTGGDLTRTLQVRPYVRFSRLDIVGVVVQPPRSNPRDTVLPPKPAKPKPAPTVTVTATPSATATNPADRS
>NZ_CP015726.1|WP_063734440.1|3974438_3975158_-|rod-shape-determining-protein-MreD
MRLNRVLLSTVLVVVALVVQICVLARLQLPGAVPDLLLLVVLGLALIYGHTGGALVGFGAGLLADLAPPADHAAGRYALVLCVVGYLAGLAKPESGQLRSAAGPMAVVVAAAIGATLLYAGVGILVGDDAARHVGLGQLLFTAALYDLLLAPFTVPLIMGLARRGENDRMADSTGGTGTEGGTRWITSAGSVRAGRMSRFRRPGRAARFGGQGGGLLTKAKRTGRIKDGRIKLKGVKRL
>NZ_CP015726.1|WP_063734172.1|3972190_3974338_-|penicillin-binding-protein-2
MSNIPETGRTPRVTVRLVAIQILVFSLLLTLGGRLWYLQIRNGDEYTEKAANNHVQQVVHPAVRGSILDARGVPLADNETRLVVSASRTALMKEPDDGEAVLTRLAGVLRMKPKDVKDKVRLCDAETPQPCWNGSPYQPIPITDEASAKQALQIREREEDFPGISAEPTAVRRYAAPAGSNAAQVLGYLSPVTDEQIKKAEHTKSPLLRSDQVGSNGLESEYDSKLRGKAGVTRYEVDNLGRVIGQRESQQARPGDNVVTSLDARVQSVAEKELDQAMKDARKQYDRNTGTKYKADSGSVVVMEAKTGRVVAMASNPAYDPNAWVGGISGKDYKKLTGKDSNFPLLNRAIQGQAAPGSIFKVIPTTAAVNAGYGFDGPYTCSSSFNIGGQVFKNFESESHGGISLGRALEVSCDTVFYRLAYEQWKKDGGNKPKKHPGDWFYKTAHQFGLAKKTGVDLPNEVSGRVPDRQWKKDFWKANKDAWCKNGKKDGNYTQRLSYENCLEGMKMRAGDSVNYSIGQGDTLVTPIQMATIYGAISNGGTLYDPTVGKAIVSPDGKHIQEIKPKSHGKLPMKGDTRDRIDQALAGVATRGTAAWRFQGWPQDKIPMHAKTGTAEVYGKQTTSWFATYTKDYSVVMTISQGGTGSGASGPAVRKIYNALYGVDGKGKINEKKALLPKPQTDLPKISSDGSIEAQPVGKPFALLGETRRRGGAQQ
>NZ_CP015726.1|WP_009717942.1|3970991_3972194_-|rod-shape-determining-protein-RodA
MSASTHGYSVPRFTPERGTWRKLMARDSLLRRLDWVLLLTCLALSAIGTVLVYSATRNRTELNQGDPYYFLVRHALNTGIGLLLAIGTVWLGHRTLRGAVPVLYGLSVILVLAVLTPLGSTINGAHAWIVIGAGFSLQPGEFAKITIILGMAMLLAARVDAGDRLSPDHRTVVQALGLAALPIAIVMLMPDLGSVMVMAVIVLAVLLSSGASNRWVAGLITTAVIGALLIWQLHVLDQYQIDRFAAFANPALDPAGVGYNTNQARIAIGSGGLTGKGLFHGTQTTGQFVPEQQTDFVFTVAGEELGFLGAGLIIVLLGVVLWRACRIARGTTELYGTVVAAGIIAWFAFQSFENIGMTLGIMPVAGLPLPFVSYGGSSMFAVWIGIGLLQSIKVQRPVSA
>NZ_CP015726.1|WP_009717929.1|3987457_3988744_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEAAKKSLSVAVYNHYKRVQAGENGSHSKDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDVENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQIDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDREALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIIEEVLMSAMYEVPSRKDVARVVITEDVVHSNVNPTLVPRSRGTEPGERHEKSA
>NZ_CP015726.1|WP_039941924.1|3988927_3989584_-|ATP-dependent-Clp-protease-proteolytic-subunit
MNNFPGSGLYDGPMAESRYVVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARILIHQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPIEKIRDDIERDKILTAEESLEYGLVDQIVSTRKTSVGLG
>NZ_CP015726.1|WP_086015815.1|3989645_3990248_-|ATP-dependent-Clp-protease-proteolytic-subunit
MPSAAGEPTGGGLGDQVYNRLLGERIIFLGQPVDDEIANKITAQLLLLAADPDKDINLYINSPGGSISAGMAIYDTMQFIPNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKRRMAELTAFHTGQTVEQITRDSDRDRWFSAEEAKAYGLVDDVMASASGVPGGGGTGA
>NZ_CP015726.1|WP_063734162.1|3990549_3992001_-|trigger-factor
MKSAVENLNPTRVRLTVEVPFEELKPSLDAAYKKINQQVTVPGFRKGKIPARIIDQRFGRGAVLEEAVNDALPKFYTDAVNEGELNPLGQPEVDITELKDNELLTFTAEVDIRPTIEIPDYSGIEVTVDSVEVSDEDIDKSVEQLRDRFATTSPVERAAAEGDIVVIDLEAKVDGEVLEDGVAEGVTYTIGSGELLDGIDEAVTGLEAGGTATFASELKGGSAQGKEAEVSVKVNEVKARELPELDDDFAQLASEFDTLEELREDSRKRLEQAKKYDQATQAQEKVLDALLELVEVPIPEKLLEDEIQTRKHNLEHHQLGQMGLNLESYLELQGKSAEEFDAELKEQAEKGIRTQFVLDELVNKEKLSVGQEELTEHLMRRAQSSGMSPDQFAQQVVEGGQVPMLVGEVARGKALAVVVEAAKVVDDKGETVDLDDEDETAETVEAAAEGDEATEAGAETAEATEAAAEAAPEQEKAQDKAEG
>NZ_CP015726.1|WP_063734160.1|3992510_3992705_-|hypothetical-protein
MVISLSLVVLVGIILVLMIRAGKMKAGPALVAALFGFLLASSDLAPNIQDFLDSVASSISDINL
>NZ_CP015726.1|WP_063734158.1|3993302_3994484_+|acyltransferase-family-protein
MTNSLRPHGSQRSPLPPAREAEAGTSPTPHREEAGRQATAPAASAPAGPKPKQRDAFFDNAKYLAIVLVAMAHSWEPLTDTSRTAEALYMTVYTFHMPAFIIISGFFSRSFDMRPDRLKRLITGVAVPYVLFEVAYSFFKRWADDDPGHPISLLDPWYLTWFLVALFVWRLTTPIWKLVRWPVPLALAIATLASVSPDIGDDLDLQRVLQFLPFFVIGLCMKPEHFQRMRGPKMRMASLPIFAGALLFAYWAAPRMNSAWFYHRDSVQELHAPAWTGPVMTLAMFGCSMVLTACFFAWVPRRHMWFTVLGAGTLYGYLLHGFLAKGSRFWGWFDIDWLHKPLGEITVTIVAASVITVLCTPPVQRAFRFAMEPKMKWAFRKDPAEQARHRTAA
>NZ_CP015726.1|WP_079152307.1|3994565_3996995_-|FtsX-like-permease-family-protein
MMTAMIVSACGILLETGVRASVPPERYASAPVVVAADQRAHHITGRGEEREDASEPVPDRARLDAALVTTAARTPGTAAAAPDTTFPLSGVQKGTLTGHGWGAAPLTGVTLTTGTPPRAGDVVLDEGAARATDTEVGGSVTVSAPDGRHAFRVSGIARSTAEDGPTAWFTDARARALSGHPRTVDAILVRPASGTGTDRLADQLKDAYDGTARVHTGDGRGAAEDPSLEGARELLMALGGSFGGIATAVAVFTAAGTVALSVGQRAREVALLRAIGATPRQIRRSIAAEALLVAPLAGALGCLPGIALAYWWFGQLKDKGAIPAPVDLAVSWIPLVTAVGAGLVSSLLAGLMAARRPARIKPGQALGEAAVERLRPGVIRTLLGTAALVGGIVLAGVAASASGEDAANTALGVVMLFMLAVALLGPLVARLCAWLIGLPLRAGAAPAVLASANTLANARRLASAITPIVLAIAFSSTLVFLHTSEDHAMAGQRRAGIVADHIVSAPGGLPADAADRAASVPGVAAAVGVLRTGVLVTTGSSLQGETAQGVSGSGRALAAVQDLDGRTGRLADLGPGRVAVDASLAQSAHVRVGDRLRLRLPDGTRAAPEVVATYGRGLGIARITLPRAALAAHVTSAFDADVLVRDHAGADRAAVAAALGKRLGERVTGRDGYAAAEDRDRALNAWSNTTMAAVLGGFAAVAAVNTLVMTVLDRRRELGTLRLIGSTRRQVLGMVRWEALLVATAGVALGTAIALATLVPMARGLTGEGPYVPPLTYAGFVGAAVALGLAATVLPARAALRRETPGGAR
>NZ_CP015726.1|WP_079152276.1|3997072_3997885_-|ABC-transporter-ATP-binding-protein
MRLRKRRTTAAPPAPHPAPATHAIELHGVQRRYGRGGTAVHALRGIDLALPHGSFTAVMGPSGSGKSTFLQCAAGLDRPTAGSVTLGGTEITGLSENKLTTLRRSRLGFVFQAFNLLPSLTVEQNVLLPMRLAGARPDRHRAREVLAQVGLHEHARRRPGQLSGGQQQRVAIARALVTRPDVVFADEPTGALDTVTAAEVLGLLRHAVDALGATVVMVTHDPVAASYADRVLFLADGRVADRLTRAPAHEIADRMTRLTARVPAALAVVR
>NZ_CP015726.1|WP_063734151.1|3998012_3999158_-|serine/threonine-protein-phosphatase
MTGGADTPMARMRKALHRARTGVRKAGVDYFRGEGSDRLALALLLLAVPAIACGTIATPDWCAPSALVLPIVAGGLLLRPASLLALYAAAATALIVESAVLGPYTEEDTSARVTPGTILVVAAVGFSGLLIAQFRSRVGVPWRRGGTMLFDLRERIRVQSKLPALPRGWHREMALRPAGGQSFSGDFVVAARTGNGGRILEVVLTDVSGKGMDAASRALLLSGAFGGLLGSLPPHGFLPAANGYLLRQDWEEGFATSVHLVLDLDSGDFELFSAGHLPALQLSAGTGKWEEKSADGPLLGVYDGAQFDPTKGTLRPGDVLMLFTDGLVETADRDISEGIDHLTGEADRYVASGFQGAAWHLIETVAKDVNDDRALLLICRQ
>NZ_CP015726.1|WP_063734150.1|3999495_4000305_-|Fpg/Nei-family-DNA-glycosylase
MPEGHTIHRLAADHLERFGGRPVRATSPQGKFADGAALVDGQVLQHAEAHGKHLFLDFAATGWVHVHLGLFGKYTFGPAPAPPPTETVRLRLAGPGGYADLRGPTACALITDPEKQAIHDRLGPDPLRPDDDGDGAWARISRSRVSVAALLMDQKIVAGVGNVYRAEVLFRHGIDPYRPGRALARAEWDAIWSDLAELMREGVRNNRIDTVRPEHTPEAMGRPPRVDDHGGEVYVYRRAGQPCHVCDGEIRTAGLAARNLFWCPACQQS

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Crispr_ID: NZ_CP015726_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_6

4036665-4036747

Orphan

Consensus_repeat	Method
ACGGCTCTTGGCGCCGTACGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_6

>merge|NZ_CP015726|6|4036665-4036747|CRISPRCasFinder
ACGGCTCTTGGCGCCGTACGCGGCACGCAGCTGCTTGCCGGTGTAGCCCTTGACGGCGTACGGCTGCTTGGCGCCGTACGCGG

>NZ_CP015726|6|6|4036665-4036747|CRISPRCasFinder
ACGGCTCTTGGCGCCGTACGCGG	CACGCAGCTGCTTGCCGGTGTAGCCCTTGACGGCGTA
CGGCTGCTTGGCGCCGTACGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_079152152.1\|4047400_4048747_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP015726.1\|WP_079152151.1\|4048739_4051253_+\|protein-kinase	unknown	unknown	gnl\|CDD\|319004
NZ_CP015726.1\|WP_063732734.1\|4042207_4043470_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP015726.1\|WP_063732741.1\|4033396_4033936_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP015726.1\|WP_063732733.1\|4046205_4047222_+\|glutamate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270408
NZ_CP015726.1\|WP_063732736.1\|4040336_4041290_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP015726.1\|WP_079152306.1\|4017673_4018825_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133062
NZ_CP015726.1\|WP_063732742.1\|4030285_4033285_+\|hyaluronidase	unknown	unknown	gnl\|CDD\|369423
NZ_CP015726.1\|WP_063732740.1\|4034346_4035435_+\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP015726.1\|WP_063732737.1\|4038996_4040325_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP015726.1\|WP_079152154.1\|4043460_4044591_+\|ATPase	unknown	unknown	gnl\|CDD\|225518
NZ_CP015726.1\|WP_063732743.1\|4029574_4029862_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063732735.1\|4041305_4042211_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP015726.1\|WP_107451128.1\|4024992_4026720_-\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|226195
NZ_CP015726.1\|WP_107451083.1\|4044805_4046125_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063734130.1\|4018909_4021483_+\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|274121
NZ_CP015726.1\|WP_009717903.1\|4023494_4024469_-\|acyl-ACP-desaturase	unknown	unknown	gnl\|CDD\|153109
NZ_CP015726.1\|WP_063732738.1\|4037657_4038884_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP015726.1\|WP_063734123.1\|4024697_4024943_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063734129.1\|4021679_4023476_-\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|276807

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_079152152.1\|4047400_4048747_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00630352
NZ_CP015726.1\|WP_079152151.1\|4048739_4051253_+\|protein-kinase	gnl\|CDD\|319004	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat. This domain is found at the C-terminus of protein kinase G and contains a tetratricopeptide repeat (TPR).	3.81688e-89
NZ_CP015726.1\|WP_063732734.1\|4042207_4043470_+\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP015726.1\|WP_063732741.1\|4033396_4033936_-\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	1.19396e-23
NZ_CP015726.1\|WP_063732733.1\|4046205_4047222_+\|glutamate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270408	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold. This group includes periplasmic glutamate-binding domain GluB from Corynebacterium efficiens and its related proteins. The GluB domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.21349e-89
NZ_CP015726.1\|WP_063732736.1\|4040336_4041290_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.27327e-67
NZ_CP015726.1\|WP_079152306.1\|4017673_4018825_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133062	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.	4.97468e-81
NZ_CP015726.1\|WP_063732735.1\|4041305_4042211_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.82976e-82
NZ_CP015726.1\|WP_063732740.1\|4034346_4035435_+\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.89969e-37
NZ_CP015726.1\|WP_107451128.1\|4024992_4026720_-\|alpha-L-fucosidase	gnl\|CDD\|226195	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism].	4.07514e-46
NZ_CP015726.1\|WP_079152154.1\|4043460_4044591_+\|ATPase	gnl\|CDD\|225518	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism].	1.44459e-22
NZ_CP015726.1\|WP_063732737.1\|4038996_4040325_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.25597e-72
NZ_CP015726.1\|WP_063734130.1\|4018909_4021483_+\|aminopeptidase-N	gnl\|CDD\|274121	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type. This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).	0
NZ_CP015726.1\|WP_009717903.1\|4023494_4024469_-\|acyl-ACP-desaturase	gnl\|CDD\|153109	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain. Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 10 to yield oleic acid in the ACP-bound form. The enzymatic reaction requires molecular oxygen, NAD(P)H, NAD(P)H ferredoxin oxido-reductase and ferredoxin. The enzyme is active in the homodimeric form; the monomer consists mainly of alpha-helices with the catalytic diiron center buried within a four-helix bundle. Integral membrane fatty acid desaturases that introduce double bonds into fatty acid chains, acyl-CoA desaturases of animals, yeasts, and fungi, and acyl-lipid desaturases of cyanobacteria and higher plants, are distinct from soluble acyl-ACP desaturases, lack diiron centers, and are not included in this CD.	2.42296e-135
NZ_CP015726.1\|WP_063732738.1\|4037657_4038884_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.76188e-40
NZ_CP015726.1\|WP_063732742.1\|4030285_4033285_+\|hyaluronidase	gnl\|CDD\|369423	pfam07555, NAGidase, beta-N-acetylglucosaminidase. This family has previously been described as a hyaluronidase. However, more recently it has been shown that this family has beta-N-acetylglucosaminidase activity.	2.501e-145
NZ_CP015726.1\|WP_063734129.1\|4021679_4023476_-\|sel1-repeat-family-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	6.01721e-10

>NZ_CP015726.1|WP_063732740.1|4034346_4035435_+|mechanosensitive-ion-channel-family-protein
MFWSAALAADSTPRPTSPTTLDDAHRSATNAAGWVEENWSTWLSVGLRIALILVIAFVLRSVLRRGITKLIERMNRTAQAVNGTALGGLLVNVERRRQRSAAIGSVLRSVASFVIMGTAGLMILSALQINLAPLLASAGVAGVAIGFGARNLVTDFLSGVFMILEDQYGVGDSIDAGVASGEVIEVGLRVTKLRGDNGEIWYVRNGEVKRIGNLSQGWATAGVDVQIRADEDLDRVREVINQVGVDMGKDEPWNERLWEPIEVLGLAAVYLDSMVVQVSARTMPGKALGVERELRWRIKKALDEAGIQLVGHPPEANLATEVADGSAGVNAPSALANPDSPQSAAASPLSPPPAASPPAPTK
>NZ_CP015726.1|WP_063732741.1|4033396_4033936_-|HNH-endonuclease
MPHVLVLNASYEPLGVVPLRRALILVLNDKAVSLEDSGALMHSATRAIPAPSVVRLKRFVRVPFRGPVPLTRRALFARDGGRCAYCGGVATSVDHVIPRSRGGQHTWENVVAACRRCNHVKADRHVAEIGWRLRHQPAPPSGLAWRIIGTGHRDPRWLPYLEAFGADDAMARIDGSKTA
>NZ_CP015726.1|WP_063732742.1|4030285_4033285_+|hyaluronidase
MAAAVIGGLLGGAQGASAAPVDPGTAGASTPDRNSTGDVPSVWPRPQSLRAQGTDVAIPGEATLIADGDADPYALDALRALLHDAGVRTVSEATPGGKPPARGLVVHAGGKGAQSALRALRAPERGDLPSGGYRLASGRVDGHATVALDGVGRDGLFHAVQTLRQLLVQRSGQDTKAFAGVTVRDWPGTAVRGTTEGFYGSPWSQRDRLAQLDFMGRTKQNRYLYAPGDDPYRQARWRDPYPAERRAEFRELATRARANHVTLGWAVSPGQEMCFSSDSDMKALLKKVDAMWALGVRSFQLQFQDVSYSEWHCGKDADTFGSGPEAAAKAQAKMANAVARHLAGRHPDAAPLSLMPTEYFQDGDTEFRRALAADLDTAVEVAWTGVGVVPRTITGGELADARSAFGHRLVTMDNYPVNDYAQDRIFLGPYTGRDPAVATQSAALLANAMEQPSASRIPLFTAADFAWNPRGYRPQESWQAAIDDLAGPDDKTRAALHALAGNDASSVLGGDESAYLRPLTDAFWAEVGRTDVGRLDRAADRLRAAFATMRDAPERLSGMLGDDVRPWLDQLGRYGDAGVQAVDMLTAQAHGDGDRAWTARLAVEGLREKIADSRVTVGKGVLDPFLKKALAQADDWSGVKRSGKEKLRTREADHAAADGKATTTVASPGKPVTVRFGRTRPLASVSALTGRSADGAGTVEAHVPGEGWRRLGALAADGFTQVGGKGIRADAVRLSWAAGTTPAIVHEITPWFADTPAAELRLSRGSVDAEVGGRSATVRAELTSLRPGDVNDDLKLRAPHGITARAPEGVTAPRGATATARIEISVDEGTKPGTYAVPVRFGSEQRMLTVRALPRTGGPDLARAKGTKATSSGDETPDFPASAAIDGDSGSRWSSPAEDGAWLQVELARPAHVGRLDLRWQDAYASRYRVQVSADGRTWRTAATVTDGQGGREMVGLDAPDTRFIRIQGIERGTRFGYSLWSVAAYAVEETKGKKPGKD
>NZ_CP015726.1|WP_063732743.1|4029574_4029862_-|hypothetical-protein
MAASALLPSALSKPVPEAVREPDPFAGVSDPDCGLCGLDGFGSGVATETPLTSEPPLADNVPLTSEPPLATERPLTSEPTAAGIGAGAALESMEY
>NZ_CP015726.1|WP_107451128.1|4024992_4026720_-|alpha-L-fucosidase
MDTTAYRRGPMSGRRPARRLRTLALATMAAAATLIPTGGGAAAAPDSCEAPITDASQHVIEDCDTPARIIDKAVHTVPTPGQLAWQQRDVTAFTHFGMNTFTNREWGSGTEDEKLFDPAALDFDQWMRTYKAAGARQVMLTAKHHDGFTLYPSRYTDHDVAASPWWTRGPDKKNPEGDVLGAYVKAARAAGLKVGVYLSPADGAELPHAWHAQWVEKVKEKQANGEQLSLPERMALEDAGRAPAGQGRYGNGSTPTERTIPTLMPGDDRAADVASGKLPSFRFTADDYDAYYLNQIYEILTQYGPVDEFWLDGANPWSGAGVTQKYDVTNWFRLIRALAPDSVVFQGAQGVRWVGNESGVARETEWSVTPSAVDPWTVIGGGLPNDSTDADIGSRAKLTAPGVRYLQWYPAEADVSLRPGWFHHPAERPKTAAQLMSLYERSVGRNASLLLNVPPAKNGRIDAADVASLTAFGTAVANTYGSGLPIGDGPVTFDRVRVGEDIRYGQRVEAFTVQARTAGTWRDIASGTTIGARRILALPTAVTADAVRVRVQESRATPRLLPVTVHRAQKPQEAP
>NZ_CP015726.1|WP_063734123.1|4024697_4024943_-|hypothetical-protein
MSNKVKKNAVRAGAVIAATTAMQLMSSPAFALTRDDGDDPGPGLSVAETLGLFVVAPILLFLVIAGLVMLGDKKSGQQATD
>NZ_CP015726.1|WP_009717903.1|4023494_4024469_-|acyl-ACP-desaturase
MTLAPSSRNGQAVWSDTQLLYALEEVVETELNRHLGVAKEWMPHEYVPWSDGRNFDGVMGGEAWAPDQSKVSDVGRIALVVNLLTEDNLPSYHHEIATLFGRDGAWGTWVHRWTAEEGRHGIVMRDYLLTSRAVDPVQLERFRMAHMGEGFESDNNHSMLHTVAYVAFQELATRISHRNTGHHSGDPVCDRMLARIATDENLHMIFYRNLLSKAFELAPDQTMCAVRDVVVGFRMPGHGMPGFERAAAQIAIGGIYNLRIHHDDVLQPVLRFLKVLQISGLGPDGLKAQEELGLYMGGLDDQATKFDERREALLARRRARAERD
>NZ_CP015726.1|WP_063734129.1|4021679_4023476_-|sel1-repeat-family-protein
MMVDHPSHGTSGAASGDAPGDHRDVAAELRAAAAAGEPGAYRSYAELLTERGQLDEALPWWARAADAGDADASRTLAICHKDRGEFAEAERWYRTAADRDGGCAFGLARLLQEAGDPAGAEEWYGRGAALGSVSCTTNGALMLAARGEWDTALERLAEASAEGDDVATRTRKVIEDLLGELAGWRDALAAAEAAGDPDAAYEALRALLDPDRQGMYDTYPHLVAEAEALYARAAAIGSVKALVDQAIFVSRDAARGDEARALVERAHELGYDGAAFVLGVWAEERGELRAAETWYRTADDADGGHFWACYNLGVLCTRQRRLDEAEEWLLSTGIDPEHWDPFSESEERVIRALEDVAAIRADPARQGSAQWRDRLPGLRASAREGGPDAWYAYAEALDHIHRLPEAAEWYRKAGTPRALLALGRMLYGSGGAKGTLMVPYYEAAAGEGDASAAYDIGRIHDEAGERRTAEIWFHRAAGLGHGGAAWWLGWTSEERGGDPQQAERWYVRAARTGLVPPAFLAGRSMVRRGAHADAVPLLHTAHDGGHAEAAYWLAKAVRGLGRPEEAERWLRTAVERHPQVLRDYGPMARQAIPDPSRN
>NZ_CP015726.1|WP_063734130.1|4018909_4021483_+|aminopeptidase-N
MPGTNLTREEAQERARLLTVDAYEIELDLSGAQEGGTYRSVTSVRFDAAEAGASSFIDLVAPAVHEVVLNGDALDPAEVFQDSRITLPSLLAGRNDLRVVADCAYTNTGEGLHRFVDPVDQQAYLYTQFEVPDARRVYASFEQPDLKATFQFTVTAPEGWTVISNSPTPEPKDNVWRFEPTPRISTYITALIVGPYHSVHSSWDSGDGRSVPLGIYCRPSLAEFLDSDAIFAVTRQGFDWFEEKFDYAYPFAKYDQLFVPEFNAGAMENAGAVTIRDQYVFRSKVTDAAYEVRAETILHELAHMWFGDLVTMEWWNDLWLNESFATYTSIACQAYAPGSRWPHSWTTFANSMKTWAYRQDQLPSTHPIMAEINDLDDVLVNFDGITYAKGASVLKQLVAYVGMDEFFQGVQAYFKRHAYGNTRLTDLLGALEETSGRDLKTWSKAWLQTAGINVLRPEITTDASGTITSFAIRQEAPALPTGAKGEPTLRPHRIAIGLYDLDATGKLVRSERIELDVDGELTEVPALVGTKRSAVILLNDDDLSYAKVRLDADSLAVVTDHLGDFEASLPRALSWASAWDMTRDGELATRDYLALVLSGVAKESDIGVVQSLHRQVKLALELYAAPDWRETGLAQWTDATLEHLRAAAPGSDHQLAWARAFAATARTDAQLGLIAGLLDGSETIEGLAVDTELRWALVERLAATGRADEAEIAAELERDKTSAGERHAATARAARPTEAAKAEAWASVVEGDKLPNAVQEAVIGGFVQTDQRELLAPYTEKYFAAVKDVWNSRSHEMAQQIAVGLYPALQVSQGTLDATDAWLGSAEPSAALRRLVTESRAGVERALKARAADAAAG
>NZ_CP015726.1|WP_079152306.1|4017673_4018825_+|glycosyltransferase-family-2-protein
MPMPPPHAHVPVPPTTTVPAVSLVIPTFNEAANIEALLDRITAAVPEDVPYDVLFVDDSTDHTPQVIAEAARHRPVPVSVHHRPRADGGLGGAVVEGIARTTAPWIVVMDADLQHPPELLPELLAAGIRTEAELVVASRYAAGGSRRGLAGRYRQAVSRASTTAAKALFPRALRGVSDPMSGFFAIRRDAVARGAEDGGLRPLGYKILLELAVRCRPRGVAEVPFAFGERHAGESKSTLREGMRFLRHLAHLRAGGDARLRLLAFALIGASGFLPNLAALWLLTGPAGMHDVPAEILANQAGLLWNFVLVDTLLHHRHRAERPRGARLTGFALLGNADLIARIPLTMLLVSTFGLSPLPATALSLVAVFFLRFLLVDKLVYRR
>NZ_CP015726.1|WP_063732738.1|4037657_4038884_+|ROK-family-transcriptional-regulator
MAAPPPGNTTPNGTPGTPRVLRAMNDRAALDLLAAHGPLTRTRLGELTGLSKPTASQLLTRLESAGLVRPTGNVTGRPGPNAQLYEINPAAAHVAALAVDQEGISAAVADITGQVVGEHRVTAPTTDESLTGRTAELVAEAVDGALAAAGLDRADLHGTVIGTPGALDPRTGTLRYAPHLPGWQSRALRDELAEVLHTPIVIENDVNLAAVAEQHHGTAQDFDDFALVWADEGVGAAIVLGGTLLRGATGGAGEIGYMPLPGAPLARGGPDAAAAPDGGGGFQKLVGCPAVVELAREHGIEAPTAAKALTAALRTPGAGDAVLTELARRLATGLASVVAVVDPELVVLSGEVAQAGGERLRELVETELTGLALPRPELRISDIEGDPILIGALRQAVADARNTVFDTA
>NZ_CP015726.1|WP_063732737.1|4038996_4040325_+|ABC-transporter-substrate-binding-protein
MPPRLAVLASVLGAGALLLAGCANPSTGSATDDPTKPVTLKFWHGWSEKNEVKAIDASIARFEKLHPNIKVKTTGNVTDATLNQALRAGGDDAPDVASSFTTNNVGQYCSSGMWADLDPFMKKTGLDKNKVFPKTLLDYTSYDGDQCALPLLADAYGMYYNKDAFKEAGISRPPRTMSELRRDAVKLTKRTKSGGYERVGFMPNFRLYQNSPDRLFAQWGPTYFDKDGNARLAKGSAAKDFFATARDLVKSQGGYGPLEKFRTSFGDEMSSQNAFLTGKLAMHMDGEWRGLFMKGAKFKWGTAPLPVPDDQPETYGRGYLTGTVIGIGHSSKHQNAAWELVKFLTADTDQVVSFANAIHNVPSTKAALTSPKLDPDPTFRAFLDIAQNRYSTALPASINGGQYVVSLQDFSYGVEEGKEPDLNKGLRELDKEIDADNLQAQN
>NZ_CP015726.1|WP_063732736.1|4040336_4041290_+|sugar-ABC-transporter-permease
MATVTNSPALRRKAVRARLRTLGFLSPWLVGFTVFFGYPLVATVYFSFMHYNQIETPTFVGLRNWRYVFEQMPLFGPALWNTLWLVVVMVALRVVFGLGIGLLVTKVKSGVGFFRTAFYLPYLAPPVAATVAFVFLLNPGTGPVNDILGTIGISAPNWFNDPTWAKPSLVLLSLWGIGDLMVIFMAALLDVPKDQYEAADLDGAGALHKFRYVTWPSITPIVMFAVVTGVVQTMQYYTQALVAGKLASGVSIGPGSVIQPGYPDHSTLTVPQLVYSLGFQNFNTGAACVLSLVLFAIAMAVTTLLMRRRAGLLSAED
>NZ_CP015726.1|WP_063732735.1|4041305_4042211_+|carbohydrate-ABC-transporter-permease
MTATTTLTAPSAPVRPRTRRSPAPAARRRAALHWIAVHTVAVATALFFLLPFVFVFLTAVMSDSQAMSGALWPAEWHWSNYAEVFRTPGFLDWWRNSLMYAVLGTLFTLCSSIPVAYALAKFRFRGRRTAMILVISTMMLPPQVIVVPMYLVWAQQFHLSGSLWPLIIPMAFGDAYSIFLLRQFLLTIPREYLESARVDGCGEFRTLLRIIVPMAKPGIAAVALFQFFYCWNDYFGPQIYAAQNPGAWTLSYGLESFKSAHSVNWNLTMAATLLVMAPVIIVFFFAQKAFVEGVTLTGVKG
>NZ_CP015726.1|WP_063732734.1|4042207_4043470_+|6-phospho-beta-glucosidase
MKLAVVGGGSTYTPELIDGFARLRDVLPMEELVLIDPAADRLELVGGLARRIFAKQGHPGKISWTDDLDAGVDGADAVLLQLRVGGQAARDQDETWPLECGCVGQETTGAGGLAKALRTVPVVLDIAERVRRRNPDAWIVDFTNPVGIVTRALLTAGHRAVGLCNVAIGFQRKFAKLLGVAPGEVTLEHVGLNHLTWERAVRIGGPDGEDVLPKLLAEHGDAIADDLRMPRDLVDRLGVVPSYYLRYYYQHDAVVRELRTKPSRAAEVAAIERELLEMYGDPALDEKPELLSRRGGAFYSEAAVDLTSSLLRDSGEVRIVNAFNDGTLPFLPDDAVIEVPAAVDAQGAKPLPVRPLEPLYAGLVAHVTAYEQLALEAALKGGRERVFQALLSHPLIGQIDCAEKLTDDLIAHNREHLAWA
>NZ_CP015726.1|WP_079152154.1|4043460_4044591_+|ATPase
MGLTQSEPAGSAPASPSAAAPGPSVLAIDAGNSKTDVALVGPDGTVLGTARGGGFRPPVVGTERAVGGLARLVEEAARRAGGSGPPRVGHVSACLANADLPSEEEALTEALTGHGWGDTVTVANDSFALLRAGVADDGEPTGVAVVCGAGINCAGLGHGGRTARFPAIGRLSGDWGGGGFLSEEALWWAARAEDGRGEPTELARALPAHFGLTTMYELIEAVHLGRLEPSHRYTLTPVLFAVAAGGDEVARAIVDRQAEEVVTMATVALTRLDLLTEETPVILGGGVLAARHPQLDDRVRELLAERAPKAAPRVVTAPPVLGAALLGLDHTGAPPAAYARLRAHYDGAEGAATQRARTGVTETDGDEMGTGSPSRA
>NZ_CP015726.1|WP_107451083.1|4044805_4046125_+|hypothetical-protein
MRAGATTEPGRLRIIGAVLAALVVAFGAVTAWQVSDRKTAADAVAEHSQPLSADAARIYRSLADADTTAASGFLAGGQESAAVRKRYERDIDTASELLVRAAANTEGSASARAEIRKISQLLPVYTGLVESARANNRQGLPLGGAYLRYANDTMRTRLLPAADRLYEAETARLGDDYGDAKSWPWASIGVGVVALAALGWAQRRNYRRTNRVFNHGLLGASAAATVVLVWLVAGHALARADLNESDDHGAKSLRVLNEARIASLRARADENLTLVARGAVVVDKDGANKGKDAYEVSYASRMAGLIGGGSGDRPAEGSLLDRADDLADDGGGRDPVEAAATAVRAWQDRHKAARSADDAGDYKDALEKVIGTKDSTGESFDRVDDELAEALGHEQRQFQEAADSGRGAFTGMAVGAGVLAVLGAAGAVLGIGRRLSEYR
>NZ_CP015726.1|WP_063732733.1|4046205_4047222_+|glutamate-ABC-transporter-substrate-binding-protein
MRSGLAAVVCALGVTTAIVGPALVDGGGDTRQSQASQRSRPGPHPLGAGSEAAAEDCEKPEASLRPSSASGPAIKRIKERKIHGHKVGKLIAGVDQNSYRWGYRDPATGELTGFDIDIVRAIAKDIFGDPDAVIYRTIPTSQRIKALQQGKVDIVVRTMTINCDRIKDVAFSTAYFQAGQQVLVPDDSSITGYNTTLRGKRVCTAQGSTAEAVLDEPEKGAEALGAIKVKPVPNQLDCLVRLQMGQVDAVITDNALAAGQAAQDPSVKLVGPRFTDELYGVAMNKNDDDLVRRVNQVLEDYRKGGADSPWQRAYRTWLADDFGRTQRNPAPPDPVYKD
>NZ_CP015726.1|WP_079152152.1|4047400_4048747_+|hypothetical-protein
MGVPGPFPGSAGTPEGPAMGREEVDRALARLGAEHEAIETSLLALQDHAGRRLLEGAELTGVTKERWATTEQAISLLWSYFDAYTDALRRAREVRSRHRWSTPGELAELTELLRGPGITLPSTATLTGSPLLSEQLSLDLLVDRMNRWYAEALDVIVTADAVWSALPARIDMLSAELHRTRSLAHSVGVRPGEHPSGDDLEQITAELTALRAEVVSDPLAFWKPAAGRSSAPGGGSPDTVRYDRAARALDDVRREIEAVLDVRQDAERRLMRLRDVLSRADRTLSEARQARGEVLAKIAASEVPAVSGPPTALHEQLVMAADYRRHSQWHRLSPLLESLEQRADDELLRARESLTAVTAPLAVRAELRGRLDAYKAKVARHGMAEDPFLVERYDVARRMLWSAPCDLRAAEQAVLRYQRAAAEALAPRQQDPAGHGAADRGSEGERYE
>NZ_CP015726.1|WP_079152151.1|4048739_4051253_+|protein-kinase
MSDVVTCQRRECGGTYEDVGGGELYCGTCGMAPVVSPQGMVSSPPTGVAGGGGRGSSSRSSRSSRPSRSSSSRRSVSGRLSRSSSGRSSRSVSVRGSGSSSTASGRNALGAGLVSVPEVPRPDPRTAVLADPEVPERKRFCSRGDCGAPVGRARGDRPGRTEGFCTKCGHPYSFVPKLGPGDIVHGQYEVAGCLAHGGLGWVYLAIDRAVSDRWVVLKGLLDTGDEEALAAAVSERRFLAEIEHSNIVRIYNFVEHLDQNTGSLDGYIVMEYVGGKSLKDIANARRAPDGRRDPLPVEQACAYGIEALEALGHLHSRNLLYCDFKVDNAIQQQDQLKLIDMGAVRRVDDEDSAIYGTVGYQAPEVAEQGPSVASDLYTVARTLAVLTFDFQGYTNVFVDSLPDPEHIEVFRRYESFYRLLVRATDPDPGRRFSSAQEMADQLTGVLREAVALQTGRPRPALSTLFGPETRVVDTALFAEEGQDPSLLGGRTTDRGAPRGGPVPPQGPLVPPQGPPAPPQGPLALPLPAIAPLDTRATALALPVPLVDPSDPNAGSLAGLLSAPPAEVGAALQSAPVDSPELRLRRVRALLELGQVREAGDALTGLEAAYHDDWRIVWYRGVHALASGDHETAALSFDAVYDAFPGEPAPKLALGVCAEVLGQLDNAAEYYRLVWATDPSFVSAAFGLARVRLCSGDRTDAVRVLESIAESSIHYTAARVAAVRSRLRQRAAREALLADLTAAALQVERLGELGLDAVRRERLCTEVLGSALDWVLSGSSGAPPGQTRPPLLGSSLDERGLRFGLERSYRVLARLAQRGEERIELVERANRYRPKTWV

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Crispr_ID: NZ_CP015726_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_7

5255008-5255099

Orphan

Consensus_repeat	Method
CGAGTTCTGGGGTGGTGGGCGGGGCG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP015726_7

>merge|NZ_CP015726|7|5255008-5255099|CRISPRCasFinder
CGAGTTCTGGGGTGGTGGGCGGGGCGCATGGGCCACCCCGCTTCCGGTCGGGCTCACGGCAGAGGACGAGTTCTGGGGTGGTGGGCGGGGCG

>NZ_CP015726|7|7|5255008-5255099|CRISPRCasFinder
CGAGTTCTGGGGTGGTGGGCGGGGCG	CATGGGCCACCCCGCTTCCGGTCGGGCTCACGGCAGAGGA
CGAGTTCTGGGGTGGTGGGCGGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063729913.1\|5245659_5246835_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|273616
NZ_CP015726.1\|WP_063729906.1\|5242664_5243597_-\|mycothiol-synthase	unknown	unknown	gnl\|CDD\|132489
NZ_CP015726.1\|WP_009716898.1\|5251053_5251389_-\|Lsr2-family-protein	unknown	unknown	gnl\|CDD\|378714
NZ_CP015726.1\|WP_009716899.1\|5247421_5249944_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|214361
NZ_CP015726.1\|WP_063729925.1\|5255132_5256185_-\|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl\|CDD\|236125
NZ_CP015726.1\|WP_063730530.1\|5260178_5261351_+\|threonine-aldolase	unknown	unknown	gnl\|CDD\|224919
NZ_CP015726.1\|WP_063729956.1\|5265109_5266120_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224481
NZ_CP015726.1\|WP_009716895.1\|5252664_5252859_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_009716896.1\|5252154_5252550_-\|CopY-family-transcriptional-repressor	unknown	unknown	gnl\|CDD\|367747
NZ_CP015726.1\|WP_063729933.1\|5261484_5261820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063730529.1\|5256181_5257954_-\|L-aspartate-oxidase	unknown	unknown	gnl\|CDD\|236102
NZ_CP015726.1\|WP_063729947.1\|5261919_5263011_+\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|197713
NZ_CP015726.1\|WP_063729930.1\|5258007_5259003_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|376824
NZ_CP015726.1\|WP_009716893.1\|5254172_5254970_-\|type-III-pantothenate-kinase	unknown	unknown	gnl\|CDD\|237347
NZ_CP015726.1\|WP_063729909.1\|5243774_5245598_+\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|277357
NZ_CP015726.1\|WP_063729951.1\|5263022_5263721_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP015726.1\|WP_039938566.1\|5258999_5259935_-\|DUF2520-domain-containing-protein	unknown	unknown	gnl\|CDD\|227782
NZ_CP015726.1\|WP_009716897.1\|5251610_5252132_-\|amino-acid-N-acetyltransferase	unknown	unknown	gnl\|CDD\|236132
NZ_CP015726.1\|WP_063729918.1\|5250406_5251048_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063729954.1\|5263802_5264999_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063729913.1\|5245659_5246835_-\|glycosyl-transferase	gnl\|CDD\|273616	TIGR01426, Glycosyl_transferase, glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. [Cellular processes, Toxin production and resistance].	9.58585e-133
NZ_CP015726.1\|WP_063729906.1\|5242664_5243597_-\|mycothiol-synthase	gnl\|CDD\|132489	TIGR03448, mycothiol_MshD, mycothiol synthase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.3114e-121
NZ_CP015726.1\|WP_009716898.1\|5251053_5251389_-\|Lsr2-family-protein	gnl\|CDD\|378714	pfam11774, Lsr2, Lsr2. Lsr2 is a small, basic DNA-bridging protein present in Mycobacterium and related actinomycetes. It is a functional homolog of the H-NS-like proteins. H-NS proteins play a role in nucleoid organisation and also function as a pleiotropic regulator of gene expression.	4.39638e-56
NZ_CP015726.1\|WP_009716899.1\|5247421_5249944_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|214361	CHL00095, clpC, Clp protease ATP binding subunit.	0
NZ_CP015726.1\|WP_063729925.1\|5255132_5256185_-\|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl\|CDD\|236125	PRK07896, PRK07896, carboxylating nicotinate-nucleotide diphosphorylase.	2.30001e-157
NZ_CP015726.1\|WP_063730530.1\|5260178_5261351_+\|threonine-aldolase	gnl\|CDD\|224919	COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism].	6.54484e-40
NZ_CP015726.1\|WP_009716896.1\|5252154_5252550_-\|CopY-family-transcriptional-repressor	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	2.12304e-21
NZ_CP015726.1\|WP_063729956.1\|5265109_5266120_+\|hypothetical-protein	gnl\|CDD\|224481	COG1565, COG1565, Uncharacterized conserved protein [Function unknown].	7.12041e-29
NZ_CP015726.1\|WP_063730529.1\|5256181_5257954_-\|L-aspartate-oxidase	gnl\|CDD\|236102	PRK07804, PRK07804, L-aspartate oxidase; Provisional.	0
NZ_CP015726.1\|WP_063729930.1\|5258007_5259003_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|376824	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (EC:6.3.2.1) catalyzes the formation of pantothenate from pantoate and alanine.	7.99955e-134
NZ_CP015726.1\|WP_009716893.1\|5254172_5254970_-\|type-III-pantothenate-kinase	gnl\|CDD\|237347	PRK13318, PRK13318, type III pantothenate kinase.	7.38926e-153
NZ_CP015726.1\|WP_063729909.1\|5243774_5245598_+\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|277357	cd07412, MPP_YhcR_N, Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	4.88304e-129
NZ_CP015726.1\|WP_063729951.1\|5263022_5263721_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.3228e-71
NZ_CP015726.1\|WP_039938566.1\|5258999_5259935_-\|DUF2520-domain-containing-protein	gnl\|CDD\|227782	COG5495, COG5495, Uncharacterized conserved protein [Function unknown].	5.19516e-51
NZ_CP015726.1\|WP_063729947.1\|5261919_5263011_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	2.46537e-13
NZ_CP015726.1\|WP_009716897.1\|5251610_5252132_-\|amino-acid-N-acetyltransferase	gnl\|CDD\|236132	PRK07922, PRK07922, amino-acid N-acetyltransferase.	1.28042e-112
NZ_CP015726.1\|WP_063729954.1\|5263802_5264999_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.48124e-47

>NZ_CP015726.1|WP_009716893.1|5254172_5254970_-|type-III-pantothenate-kinase
MLLTIDVGNTHTVLGLFDGDEIVEHWRISTDARRTADELAVLLQGLMGMHPLLGEELGDGIEGISICSTVPSVLHELREVTRRYYGDVPSVLVEPGVKTGVPILMDNPKEVGADRIINALAAVELYEGPCVVVDFGTATTFDAVSSRGEYVGGVIAPGIEISVEALGVRGAQLRKIELARPRSVIGKNTVEAMQSGILYGFAGQVDGIVRRMARELAQDPEDVTVIATGGLAPMVLGEASVIDEHEPWLTLIGLRLVYERNVQRG
>NZ_CP015726.1|WP_009716895.1|5252664_5252859_-|hypothetical-protein
MDYVSALVPPLVMAVAFTFLIVTMIKSQGGANKAKEDHLVDAALARAEADRTASAGNAPGRDAS
>NZ_CP015726.1|WP_009716896.1|5252154_5252550_-|CopY-family-transcriptional-repressor
MPRPLGELEDAVMTRVWKWNRPVTVREVLEDLQRERSIAYTTVMTVMDNLHHKGWLRREVQGRAYRYAAVSTRAAYSAALMNEAWSTSDNPAAALVAFFGMMSEEQRDALRDAMRVAQLGEPGESPGESGR
>NZ_CP015726.1|WP_009716897.1|5251610_5252132_-|amino-acid-N-acetyltransferase
MSSALSKVVTVRRARTGDVRAVRRLIDSYVSDRILLDKATVTLYEDIQEFWVAERDEDAELIGCGALHVMWEDLAEVRTLAVDPAHKGSGVGHLVLDKLLQTARWLGVRRIFCLTFEVDFFTKHGFVEIGETPVDGDVYSELLRSYDEGVAEFLGLERVKPNTLGNSRMLLQL
>NZ_CP015726.1|WP_009716898.1|5251053_5251389_-|Lsr2-family-protein
MAQKVQVLLVDDLDGGEADETVTFALDGKSYEIDLNTVNADKLRDALEPFTKGGRRTGGRASGGRGKARAASGSGQDTAKIRAWAKENGYEVNDRGRVPATVREAYEKANG
>NZ_CP015726.1|WP_063729918.1|5250406_5251048_+|hypothetical-protein
MIPTATAPSGRSQDRPAPGPCSPAQGAPGCARWYERGLNWPTTGSGPVELLTGVAFDVLELPVVAGFALLRRVPRTGPVAVEGPWMRLLVAAGSADELPGLLDWLEWGGVPLDLTALGAGGRITAPCPSAAWPPPGEPGSGTPAERCPQEAAVWLRPPEPGCGVEPTLPVTGFGGDGGAPDLVRLVGAAATECHRARLLRARPLPRQRRAGEG
>NZ_CP015726.1|WP_009716899.1|5247421_5249944_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIADVRREKESAIDSQDFEMAAGLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDEELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYERMKNKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVDLMITKVDERLKDRDMGIELSGVAKKLLAKRGYDPVLGARPLRRTIQREIEDVLSEKILFGELRPGHIVVVDTEGEGEEKKFTFRGEEKSALPDTPPIESAAGGGPNLSKDA
>NZ_CP015726.1|WP_063729913.1|5245659_5246835_-|glycosyl-transferase
MSRRRAHIAMVGIPAISHILPSLEVIRELVARGHRVTYANDSYRADVIMPTGAALVPYGSTLPVADNDWPEDPIAAMTVFLDDAIQALPQLRAAYDDDPADLYLYDIGGYAGRALAERQGRPAVQLSPTFVAWEGYEQEVAAHILALPGADAYLTKFAAWLAGCGAVTTDVNAFSGPPGRAIALIPRAMQPNADRVNEEVVTFVGPCLGDRADQGRWERPADAEKVLLVSLGSAYTRQPGFYRECLAAFGDLPGWHVVLQIGRYVDLEELGYVPANVEVRRWVPQLAILERADAFITHAGMGSSGEGLYCGLPMIAVPQGSEQPVNADRLVELGVARRVDTADATAEVLRTALLDLTTDGKVARRAADLRDEVRAEGGTARAADLIEEMLG
>NZ_CP015726.1|WP_063729909.1|5243774_5245598_+|bifunctional-metallophosphatase/5'-nucleotidase
MSARPQRRGAARRLATGVAVLATAAGVLSAANPAGADAKGADAQRHRPGRTVDVQLLSFNDLHGNLEPPQGSSGTVTETQPDGTTKAIPAGGAEYLATALRQARKGHEYSVTAAGGDMIGASPLMSGLFHDEPTIEALNKLDLDVTSVGNHEFDEGRAELTRMQKGGCHPKEGCFEKGKTFKGASFPYLAANVTDDKTGKPILKPYTVWRHKGVKVGFIGVTLEGTPDVVTADGVKGLKFHDEVETINKYAKELQRKGVKSIVALIHEGGQPASAAYNDDCDNGGAGKGISGPIVDIAKNVTPKVDALVTGHTHQAYACTIADPSGTPRTVTSAASFGRLYTDTTLTYDRRTNDIVRTTVKGAHAANHVVDRDRPKAADMTSLIGRWNKLAAPIAGKPVGYVSADINGRGSGAYESPLGDVITDAQLEALAPDDKGGAQIALMNPGGIRSDLAYKASGSEGDGVVTYGEAFTVQPFTNMMNVIDLTGAQLITALQQQVSGPNEASPKILQVSKGLTYTLDLTKSGKDRIVTGTVKLNGEAIDPAKTYRVAMNEFLAGGGDGFPAFKDGKNKLVGASDLEALNAYLGAHSSASTPLTPPKADRITIVK
>NZ_CP015726.1|WP_063729906.1|5242664_5243597_-|mycothiol-synthase
MDDVVNETAGARRIEVLEELAPAVVEDVLRLIAESARADGQQAVSEQGRLQLRGRREGVRHLVLREPSGELVGYAQLEDTDPVEAPAAELVVRPAHRGRGHGRALGVTLLKESGKRLRVWAHGGHASARHLAQVLGLTLFRELRQMRRPLGPPDELGIPEPTLPEGVTVRTFRPGEDDEAWLAANAAAFAHHPEQGSLTQRDLDDRKGEVWFDPAGFFLAERAGEIVGFHWTKVHAEERLGEVYVVGVRPGAQGGGLGRALTAIGLRHLAAQGLPTAMLYVDADNFAAVSVYDRLGFVTHETDLMYRTET
>NZ_CP015726.1|WP_063729925.1|5255132_5256185_-|carboxylating-nicotinate-nucleotide-diphosphorylase
MSSTSDDRQQSPPQPAALPLLQIGVPGGDEGGGCGSACGCGSGADDGAYGLDPMECGLDPDLAQLLADAGLDPVQVEDIAHMAIEEDLDQGVDVTTVATVPEDAFATGDFTAREAGTVAGLRIAEAILSVVCTDEFEVERHVEDGDRVEPGQKLLSVRTRTRDLLTGERSALNLLCRLSGIATATRAWADALEGTKTKVRDTRKTTPGLRALEKYAVRCGGGVNHRMSLSDAALVKDNHVVAAGGVAQAFSAVRAEFPDLPIEVEVDTLDQIPPVLEAGADLILLDNFTPERTREAVELVAGRAALESSGRLTLANARTYAETGVDYLAVGALTHSSPILDIGLDLRETG
>NZ_CP015726.1|WP_063730529.1|5256181_5257954_-|L-aspartate-oxidase
MNEQQHGSTTPPTALRAPAPGWATEADVVVVGSGVAGLTVALRCAAAGAKVTVVTKARLDDGSTRWAQGGIAAALGEGDTPGQHLDDTLVAGAGLCDEQAVRMLVSEGPDAVRRLIATGARFDADDDTGEILLTREGGHHRRRIAHAGGDATGAEISRALVGAVRAAGIDTVENALVLDLLKDASGRTAGVTLHVMGEGARDGVGAVHAPAVVLATGGMGQIFSATTNPAVSTGDGVALALRAGAEVSDLEFVQFHPTVLWLGPEAEGQQPLVSEAVRGEGAHLVDADGVRFMVGQHELAELAPRDIVAKGIMRRMREQGTEHMYLDARHFGARMWEHRFPTILAACRAHGIDPVTQPIPVAPAAHYASGGVWTDLRGRTTVPGLYACGETACTGVHGANRLASNSLLEGLVFAERIAADIAERPSIPEPTPEPVPKPAPQGLATGASARGGGGALLAPEARYAVQRIMTTGAGVLRSAESLAQAAERLDRVREDAVETLHRDGKTAEPGVETWEATNLLLVARVLVAAALRREETRGCHWREDRPDRDDAAWQRHLLVTLGPDGSLDVRTTDSAAFPSPTTRPETESHP
>NZ_CP015726.1|WP_063729930.1|5258007_5259003_-|pantoate--beta-alanine-ligase
MSPKLWTKPNPGEPDVELFARRADFDAALAHFAAPGRTAVVMTMGALHDGHASLIRAARARVGAKGLVTVTVFVNPLQFGAGEDLDRYPRTLDADLEVAAAAGADIVFAPSAEEVYGSGEPRIRMSAGAMGEGYEGASRPGHFDGVLTVVAKLLHLTRPDFAFFGEKDAQQLVLVRRMVHDLDFPMEIVGVPTVREGDGLALSSRNRYLSEQERDTALALSRALFAGRDAGLAAARSAGSPGSPGSPGDGDTGGLVQVGSPGAVRAAARAVLAEAARLEPPLVLDYLDVIDPESFTEAPEDHTGEAVLAVAAKVGSTRLIDNIRLWFGAGR
>NZ_CP015726.1|WP_039938566.1|5258999_5259935_-|DUF2520-domain-containing-protein
MNAHPLPEPRDRPARLTVGVVGAGRVGPALAASLRLAGHRPVAASGVSDASVSRAAALLPEVPIVPPAEVLARAELVLLTVPDDALPELVTGLAETGAVRPGQLLVHTSGRYGTAVLEPALRAGALPLALHPVMTFTGTPVDVQRLAGCSFGVTAPEELRLAAEALVIEMGGEPEWVAEESRPLYHAALAIGANHLVTLVAQAMELLRASGVEAPDRMLGPLLGAALDNSLRSGDAALTGPVARGDAGTVAAHVQELRRHAPQAVAGYLAMARATADRALAHGMLKPELAENLLGVLSDVSDARGRGGAGS
>NZ_CP015726.1|WP_063730530.1|5260178_5261351_+|threonine-aldolase
MEGAEQAARERRLAAWRGSERALVRGPVEQRIGEGLAALTAAAPDLDGALDDWVDVYGDGVVERLERRVADLLGMEAAAFFPTGTMAQQVALRAWAGRTGNPVVAVHPLAHLEVHERDAYLTVSGLRAVRPTTEPRLPTADEIRDLDEPFGTLALELPLRDAGFVLPEWDDLVAVVEAAREREAVVHFDGARLWESTTHFGRGLPEIAALADTVYVSFYKSLGGIAGAALAGPETLIAEAAAWRHRYGGQVFQQWPTALAALAGLDRELPRLPSYVAHAAVVARAMREAFTAAGVAWSRVHPEVPHTHQFQVWLPYPARVLDEAGIRLAEETRTTLFRRWWEPGPPGLAVSEVTVAAPALDWTAEEVTEAVAAFLTRVRAVLAEDGEGDG
>NZ_CP015726.1|WP_063729933.1|5261484_5261820_-|hypothetical-protein
MSVTQQYALDLYRAAQRGEPAPPAPGRDDWRTVRELREYRDFQAVIEERPARRRRRAVLRALRAAAAVAARPVRAVRPARPVRAAQPVSTGPGGDAPARPVTDPSSCPTTG
>NZ_CP015726.1|WP_063729947.1|5261919_5263011_+|helix-turn-helix-transcriptional-regulator
MANVVDITGLPPERIVFSPSPLAELGAALHVLSEPGHHPGHHGWATATAASLKPDLADRLCEADFLWGTARSDLLLPSAPGATLAEELDALDRIDDEAFVAAAFEISCSASYDRPTRSPLVDRDERDRVRDMARARGPRQLAFVDRMLVDPDGLRVWLRRLLEDCHQVFFADTWQRVRVQLAADARHKGELLQRKGLAEALTATSAALSLEQGADGRTRVLVDKLAAGRTTAHGSGLTLIPTTFGWPHLLLVHAPGWPPVIQYPVAGPELAPPAALQLVQQRLEALAHPMRMRICRTLARGPHTTGELAEAYAITPPEVSRHIAVLKKAGLLHTRRRGRYVLHQLELATVARLGSDFLEGVLR
>NZ_CP015726.1|WP_063729951.1|5263022_5263721_-|response-regulator-transcription-factor
MSIRVMLVDDQVLLRTGFRMVLAAQPDMEVVAEAGDGLEALEAVRSAEVDVVLMDVRMPKLDGVEATRRICEQEGSPRVLILTTFDLDEYAFSALKAGASGFMLKDVPPGELLTAIRAVHSGDAVVAPSTTRRLLNRFAPMLPGTAGGGIGGRSGAVGRPELERLTEREREVMMLVAQGLSNGEIAGRLVLSEATVKTHVGRILTKLELRDRVQVVVMAYETGLVRAGGPPR
>NZ_CP015726.1|WP_063729954.1|5263802_5264999_-|sensor-histidine-kinase
MQRLYDFLRSHPTGVDTFWGVLLFGCGLLWFVQATPGYEPPLAAVPITLALCAAVALRRRAPAAMLWLAIACGLGQLALDVRINIVDFAMLVIVYTVACTGGRRTSRLALGAAICAPSLATLRWPTEHESSGEAAVSTVFVTIPFVLAWVLGDSIRTRRAYYAQLEERASRLEKEREAQSKVAVAAERARIARELHDVVAHNVSVMVVQADGAAYVLDASPDQARQALETISGTGRQALAEMRRLLGVLRTGEPGEASDYVPQPDVEQIDELVEQARGSGLPVDFKVVGSPRQLPSGVELTAYRIVQEALTNTRKHGGPDVGANVRITYFDDGLGLLVEDDGRGAQRELYEDGGADGSGHGLIGMRERVGMVGGTLDAGPRPGGGFRISALLPLKPAG
>NZ_CP015726.1|WP_063729956.1|5265109_5266120_+|hypothetical-protein
MASEQQEWCGWREATERALYGTDGFFRRAEGPAGHFRTSVHASPLYARAVTELLRRVDEALGRPPELALVDLGAGRGELLTGVLAAAAGQPHGLAARLRPYAVERAARPDGADARVEWRETVPEGFTGLLFANEWLDNVPVDIAETDADGVPRRVEVSAADGAERLGAEVTGEDAEWLARWWPLAGAEPGLRAEIGRPRDAAWAEAVRCVGAGLAVAVDYGHERAARPPFGTLTGFRDGREVRPVPDGTCDLTAHVALDACAAGTDARLVPQRDALRHLGLDGGRPPLALASTDPAAYVRALSAAGEAAELLDPAGLGGFRWLARPVGLPYGSLLP

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Crispr_ID: NZ_CP015726_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_8

6033316-6033391

Orphan

Consensus_repeat	Method
GTCACCGATACCGCGCCGTCATCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_8

>merge|NZ_CP015726|8|6033316-6033391|CRISPRCasFinder
GTCACCGATACCGCGCCGTCATCGATACCGAGCCCGTCACCGCAGCCGGTCCGTCACCGATACCGCGCCGTCACCG

>NZ_CP015726|8|8|6033316-6033391|CRISPRCasFinder
GTCACCGATACCGCGCCGTCATCG	ATACCGAGCCCGTCACCGCAGCCGGTCC
GTCACCGATACCGCGCCGTCACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063735451.1\|6042386_6043184_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP015726.1\|WP_063735449.1\|6045094_6047017_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP015726.1\|WP_063735557.1\|6024321_6024954_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP015726.1\|WP_039941425.1\|6031949_6033155_-\|L-2-hydroxyglutarate-oxidase	unknown	unknown	gnl\|CDD\|183292
NZ_CP015726.1\|WP_063735452.1\|6033428_6034904_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063737443.1\|6056597_6058016_-\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|315512
NZ_CP015726.1\|WP_063735453.1\|6031027_6031837_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP015726.1\|WP_063735448.1\|6047064_6048372_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP015726.1\|WP_063735447.1\|6048518_6049070_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP015726.1\|WP_063735458.1\|6023059_6023260_-\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP015726.1\|WP_063735460.1\|6022158_6022416_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735459.1\|6022660_6022966_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735456.1\|6024961_6028102_-\|DUF3427-domain-containing-protein	unknown	unknown	gnl\|CDD\|197297
NZ_CP015726.1\|WP_079152447.1\|6043503_6044859_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP015726.1\|WP_064273519.1\|6029388_6030963_-\|PrsW-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|379143
NZ_CP015726.1\|WP_063737441.1\|6059638_6060973_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180777
NZ_CP015726.1\|WP_063737442.1\|6058079_6059642_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063735455.1\|6028254_6029343_+\|DUF3578-domain-containing-protein	unknown	unknown	gnl\|CDD\|371900
NZ_CP015726.1\|WP_063735457.1\|6023252_6024104_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP015726.1\|WP_107451179.1\|6035808_6037896_+\|asparagine-synthase	unknown	unknown	gnl\|CDD\|366273

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063735451.1\|6042386_6043184_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.43823e-10
NZ_CP015726.1\|WP_063735449.1\|6045094_6047017_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	1.43916e-49
NZ_CP015726.1\|WP_063735557.1\|6024321_6024954_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	9.65443e-15
NZ_CP015726.1\|WP_039941425.1\|6031949_6033155_-\|L-2-hydroxyglutarate-oxidase	gnl\|CDD\|183292	PRK11728, PRK11728, L-2-hydroxyglutarate oxidase.	0
NZ_CP015726.1\|WP_063737443.1\|6056597_6058016_-\|ATP/GTP-binding-protein	gnl\|CDD\|315512	pfam12846, AAA_10, AAA-like domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	3.6834e-11
NZ_CP015726.1\|WP_063735453.1\|6031027_6031837_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	4.27698e-87
NZ_CP015726.1\|WP_063735448.1\|6047064_6048372_-\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.54958e-53
NZ_CP015726.1\|WP_063735458.1\|6023059_6023260_-\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	1.72151e-23
NZ_CP015726.1\|WP_063735447.1\|6048518_6049070_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.3767e-18
NZ_CP015726.1\|WP_063735456.1\|6024961_6028102_-\|DUF3427-domain-containing-protein	gnl\|CDD\|197297	cd09203, PLDc_N_DEXD_b1, N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. All members of this subfamily are uncharacterized. Other characterized members of the superfamily that have a related domain architecture ( containing a DEAD/DEAH box helicase domain), include the DNA/RNA helicase superfamily II (SF2) and Res-subunit of type III restriction endonucleases. In addition to the helicase-like region, members of this subfamily also contain one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in the N-terminal putative catalytic domain. The HKD motif characterizes the phospholipase D (PLD, EC 3.1.4.4) superfamily.	1.69031e-80
NZ_CP015726.1\|WP_079152447.1\|6043503_6044859_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	3.94161e-100
NZ_CP015726.1\|WP_064273519.1\|6029388_6030963_-\|PrsW-family-intramembrane-metalloprotease	gnl\|CDD\|379143	pfam13367, PrsW-protease, Protease prsW family. This is a family of putative peptidases, possibly belonging to the MEROPS M79 family. PrsW, appears to be a member of a widespread family of membrane proteins that includes at least one previously known protease. PrsW appears to be responsible for Site-1 cleavage of the RsiW anti-sigma factor, the cognate anti-sigma factor, and it senses antimicrobial peptides that damage the cell membrane and other agents that cause cell envelope stress, The three acidic residues, E75, E76 and E95 in Aflv_1074, appear to be crucial since their mutation to alanine renders the protein inactive. Based on predictions of the bioinformatics programme TMHMM it is likely that these residues are located on the extracytoplasmic face of PrsW placing them in a position to act as a sensor for cell envelope stress.	6.02207e-58
NZ_CP015726.1\|WP_063737441.1\|6059638_6060973_-\|hypothetical-protein	gnl\|CDD\|180777	PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional.	0.000652095
NZ_CP015726.1\|WP_063735455.1\|6028254_6029343_+\|DUF3578-domain-containing-protein	gnl\|CDD\|371900	pfam12102, DUF3578, Domain of unknown function (DUF3578). This presumed domain is functionally uncharacterized. This domain is found in bacteria and archaea. This domain is typically between 177 to 191 amino acids in length.	4.75946e-25
NZ_CP015726.1\|WP_063735457.1\|6023252_6024104_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	1.10972e-12
NZ_CP015726.1\|WP_107451179.1\|6035808_6037896_+\|asparagine-synthase	gnl\|CDD\|366273	pfam00733, Asn_synthase, Asparagine synthase. This family is always found associated with pfam00310. Members of this family catalyze the conversion of aspartate to asparagine.	4.19217e-05

>NZ_CP015726.1|WP_039941425.1|6031949_6033155_-|L-2-hydroxyglutarate-oxidase
MAAVDCDVLVIGGGIVGMSTAYAITRAAPGTRVTVLEKEAGPARHQTGRNSGVIHSGIYYRPGSLKARFAVRGAAEMVKFCAEYGIAHEVTGKLIVATERSELPRLHALVQRGRENGIPVRELGPAQIAEYEPWVRGLAAIHVGTTGVCDFGAVAAQLARLARDAGASVRYGAGVTRIGRRPTAVAVRTADGTVLRARALVNCAGLQCDRVARLAGDDPGMRIVPFRGEYFELAPSRTSLVNGLVYPVPDPAFPFLGVHLTRGIDGGVHIGPNAVPALAREGYAWHTVRPRELAGTLAYPGSWRIARRHWRYGAGELRRSLSKRAFTDAVRRLLPDVTPDDLIAAPAGVRAQAVLPDGTLVDDFLISQSPRVVHVLNAPSPAATASLPIGREVARRVLETL
>NZ_CP015726.1|WP_063735453.1|6031027_6031837_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSENSTAPDPRAERDRTVPAPARDRGEPRFPGGPAADPAGSHHERRIRSFRPRRGRVTLGQGEALRRLWPQWGLDIDGLHRLDLGKLFGDPDLPVVLEIGFGMGEATAQMAAADPGTGILAVDVHTPGQGNLLALAERDGLSNVRVANGDAIILLREMLTPASLAGLRVYFPDPWPKKRHHKRRLLQPEFVELAATRLRPGALLHCATDWEPYAEQMLEVLTASPSFDNTEPDGGYSPRPDFRPLTKFESQGLDKGHIVHDLIFRRNEA
>NZ_CP015726.1|WP_064273519.1|6029388_6030963_-|PrsW-family-intramembrane-metalloprotease
MHQSPSPHQPPDPPVTPYDQQPWFDGTAIPGGWPHPGHPGHPGHPGPWGRTSRLSRLWDNKALRATALIGLLSLSGLVILALVREQTGTKGFLVGLGLAVLPVPLIISVFRWLDRVDPKPWRNLIFAFAWGACAATLVALIANGFATEWLMTTIADSSSPGGRADADTWGATLIAPFVEESAKAAAVLLLFVFRRRDFNGIVDGVVVAGITATGFAFTENILYLGSAFVSDQEFGYSGIRSTTAATFFIRGVMSPFAHPLFTAMTGVGFGLAAAAARHQRVRRILLPIAALLAAMVLHGLWNGSSTLGGYGFIIVYAAFMVPVFGLLTWLTIWSRNKELRTVREQLTTYQAAGWLTPPEPIALSSMRARGIARDLARRSQGSAAARTVGEYIASATSLAFLRRRAHRGTAGPDFTTRERELLDRLWERRETAQPALAHAALSLPLPYPGPPQGPIPPPYWPTPPYGGYGYGYGYGTPAPGYGSPGPGYGSPGPGYGYGPQPPQAQRTPHPTYALPPSYGPQIHR
>NZ_CP015726.1|WP_063735455.1|6028254_6029343_+|DUF3578-domain-containing-protein
MDIRDLLLDVASTYDWEKGISKGVHAQDRLREVKHAWGDLVPGGFEAEGQGGSGGASKTPWIGVYDPDITRDPKRGLYLAYIFAADFSTVTLTLQQGVTWLADALGEGEKRRVYLRGRAQALFDGLPKDLVAGYEDAPDFKCDALRARSYEAGSVAARPYGLDAMPSEHHLREDLWHMAEVLQRAAAVETTLKDEETPEGVKATSGAAKSQPEGLNGFRPKDGSDYVAHIPARTITKSRSHELLVAGFGEYIDKQGFVPITEKMHPKDLVLRKDDVEWLVEAKSVKRGNPTKAVREALGQLSEYSYFLYEEQGHPKPHLLALFTEDIKVYAPYLEDRGIASVWKTIDGWAGSPLAVAWGMVD
>NZ_CP015726.1|WP_063735456.1|6024961_6028102_-|DUF3427-domain-containing-protein
MTDALTHGASPAPGLYERLITSRIEDQLKALDAAGWKTVQQKVGAHSSPHVLARHVADTVRRIFLDLPTDEQVIAANHILESISTLDGAKQWIDLIADGPRQLIAVAEQEAPGVYSMRPATPLSETALITNSPEDPNLGFELRAELATADRVDLLCAFVKWHGLRVLEESLKAARDRGVPIRVITTTYIGATERTALDRLVREFNAEVKVNYEVRSTRLHAKAWLFRRNSGYDTAYVGSSNLSRAALLDGLEWNVRLSSVATPPVLKKFEATFDSYWSEPSFETYDPDSDATRLEDALTRASGKQRTGTHAISLSGLEVRPYPHQQDMLERLHIERDIHGRHRNLLVAATGTGKTVMAALDYKALKRKHQGRPLNLLFVAHRQEILKQSLRAYQEVLDDANFGELLVGGNEPQDWTHVFASVQSLHARSLEKLAPDHFDVVVIDEFHHGVSPTYRRIVDHFEPMELLGLTATPERMDGRNVQDEFFDGHIAAEMRLWEALENDLLSPFHYFGIADNTDLEGLTWRQGSYDTGELGQLYTGNHARARLIVKAVQEKVTDPGAMRALGFCVTVAHAHFMADFFRQAGISAQALDGSTPTPERAQALKDLREGKVQVLFSVDLFNEGLDIPDVDTLLLLRPTASATVFLQQLGRGLRRTPDKAVLTVLDFIGQHRKEFRFEEQFRALTSFTRNRLTEHIERDFPQLPSGCEIILDRKSKQRILDNIKSQINVNVRQLTQEVAAYAEPQLNAYLRESRRELKELYRSNNSWTRLLRRARLLGDEHPEGEEALLKRVSAFLHVDDPQRVHAYRRMLADDAPGYDSLDASGQAYARMLFFSLWPLGGGFASYAEGFASLRQQSAFRSELSQVLAYNLEHTDHYPIPLLGDHGGVPLAVHASYSREEILPALGQADVGGFMPGNFREGVKWCEGLRTDALLITLEKDDKDFSPQTRYKDYAMSPDRFHWESQNQTSESSPTGLRYQQHQERGTHVLLFVRRYKKTDIGDPQPWMLLGPATYVSHEGSKPMGIVWRLQHKLPADVWTYSAIAAG
>NZ_CP015726.1|WP_063735557.1|6024321_6024954_+|ATP-binding-protein
MQRKAWDLPFLAEPGEVAALRRIMRTHLTLWGLSDLVEAAQICVSELVANVITHVGLGTPTTMAVDMNGTYLRIAISDPDSRALPTLLSASTTAESGRGLALVTAVTDRWGVIPTERGKTTWCEIATELRRDDTHVDRPQVHRAEALLTLYGQPLLRTSPTSPLSHAVAEEAAIAVIADLLHWFRAHGRDPDTALDRAQTHFESELGAVG
>NZ_CP015726.1|WP_063735457.1|6023252_6024104_-|helix-turn-helix-domain-containing-protein
MPGSPTARRRRLAIELKKLREEHQLTCGQVGQELDWSGSKVNRLETGQGRVQPSDVDALCRFYGTSDELRELLKELAKQSKVRGWWHAYGSAVPSWFSVYVGLEQAASGLRTYECECVPGLLQTADYARELHHATSPSSSEDVEQVIGVRMERQALLTSAMPPDLWVIIHESVLRHAIGSPKVMLGQLERLLEVAQLKNVTIQVLPFDAGSYPAVGAFSILEFPEQEDLDVVYRDGLTDAVYLERPEDIAQYTKAFDNLRALSLSPQRSSNLIRHAMRGLTDD
>NZ_CP015726.1|WP_063735458.1|6023059_6023260_-|DUF397-domain-containing-protein
MTDITPLVWHKSSYSNGAGGNCVETAKLPDHDTAVRDSKRPEGPVLGFSQDAWGDFVTAVRRNELG
>NZ_CP015726.1|WP_063735459.1|6022660_6022966_-|hypothetical-protein
MAGVPAGLVAAGGLIGGYGIARWTRRRPLGGVALAAAGAVAAKGWREKAGNGTAAALSGLYVAAFAGSHPLAKKVGAWPSVFGVAGGVAAASWVLADRRGA
>NZ_CP015726.1|WP_063735460.1|6022158_6022416_-|hypothetical-protein
MQIAKKAALLAATAGSLVLLGTGTAAAHGGPDHEVPVSVQSCSLTTGDINITNGDVTTGDVGDNSPVANNTVVISVSCFNTTDDD
>NZ_CP015726.1|WP_063735452.1|6033428_6034904_-|hypothetical-protein
MSREPRGPNEKLGTVLALAGISNAGLARRVNDLGAQRGLTLRYDKTSVARWVSKGMVPQGAAPHLIAAAIGSKLGRPVPLHEIGLADADPAPEVGLAFPRDIGQAVRSATELYRLDLAGRRGGVGIWQSLAGSFAVSAYATPASRWLISPADTSVARGPEDAENAEDAAAGAGASGTGGSGADALPQRVGHSDVTKLREAAEDARRWDSKYGGGDWRSSMVPECLRVDAAPLLLGSYSDEVGRSLFGATAELTRLAGWMAFDTGQQEAAQRYYIQALRLARAAADVPLGGYVLASMSLQATYRGFADEGVDLAQAALERNRGLATARTMSFFRLVEARAQAKSGDGPACGAALKSAEGWLERSRTGDPDPSWLDFYSHERFAADAAECYRDLRLPRQVRRFTEQALARPTEEFVRSHGLRLVVSAVAELESGNLDAACAAGARAVEVANRISSARTTEYVRDLMHRLEAYRDEPRVAELRERARPLLVAPA
>NZ_CP015726.1|WP_107451179.1|6035808_6037896_+|asparagine-synthase
MRWLVGWSSTASGPVPPEGRAIQPVGAQLLWSDPDPLWAVGDWRPDEVRVVQADPFTRLAVFGCCGATDEELRVGLFAARGGALRHLTAWPGSYTAVAQVGRRITIAGDLAGARPVFHTDWDGGTAYATAALPLADLIEAQLDVSHLGALLACPDSPEAVGDGTPYMGVRRVPPGHALVLRDGARDVTGYEPTASLAVAAPPLEQDTAVEGVRDALLEAVRARLTAPRHAPATDDLDPGPVPGMGPAERRAARGAPAPGIGADLSGGSASATLALLAAGLPGMPGTLLGHGTEAGERLLAVTFNDLATTGGARSREAELERAGAIAANPRLHHVVVAGGEEALPYAALDIGALTDEPGPSLVIAERHRRRLAAGSADHFVGHGARQVLDAHPARLADLLLDRRRRHLLRPATALAKADGPNAHSFFVPFTVYRAARRLARTSYRDGVQEAAARLLERRFTDDGAGVAAGAVSASLASLAWCRPGPAARWLTGEALAEVSVRLEEAALRPVLLRRPGERRADAALARYAADHRVFEQAAEVRSQRLHAPFLDNQVVRACRALPEALRVQPGARASVLRTVLAGAGIRDLPAGWGATSHAAHAASVRAGLRTWLGDLVTLFDAPLLADAGLIEARVVRKALRAASEGERLPLDGLAELVSTEVWLRRLLARRGTCWTGTAAPRQRAVAGGVVPRPSL
>NZ_CP015726.1|WP_063735451.1|6042386_6043184_-|helix-turn-helix-transcriptional-regulator
MHLQGSSWSAAVASSDGNGGRSTPLRVDAQRNLEHVLRAAREVFGELGYGAPMEDVARRARVGVGTVYRRFPSKDVLVRRIAEEETARLTDQARAALGQENEPWSALARFLRTSVASGAGRLLPPQVLRVGVDAEPEIRVPQQRQVALAGPAQPAGVVPSGGVLPSGGVMPSAGAAQPELRLVEEPGVAQDEPDDAGAAALLQVVGQLVERARAAGELRPDVTVADVLLVIATAAPSLPDAAQQAAASARLLDILLDGLRSRPVG
>NZ_CP015726.1|WP_079152447.1|6043503_6044859_+|NAD(P)/FAD-dependent-oxidoreductase
MKEPARILVVGGGYVGMYTALRLQRKLKRELRHGAVQVIVVDPEPYMTYQPFLPEAAAGSISPRHVVVPLRRVLGDCQVIIGEVTAIQHGKRTATIRTLATEEEGTGSIEVHYDELVLAPGSVSRTLPVPGLAETGIGFKTVEEAIGLRNHVLEQLDIASSTRDPDVRDSALTFVFVGGGYAGVEALGELEDMARYAVRYYHNIAPEDLKWILVEATNRILPEVGEEMGRYAVSELRSRNIDVRLETRLDSCQDRIAVLSDGSRFPTRTLVWTAGVKPSPILAATDLPLNDRGRLACTAALQVDGVEHAWAAGDAASVPDRTAAEPGAVCAPNAQHAVRQAKVLAENLLASLDGRPLDDYEHKYVGSVASLGLHRGVAHLYGRKAKGYPAWFMHRVYHLSRVPTFNRKARVLAEWILSGLFKREIVSLGSLENPRAEFKLAADTGRHPEAS
>NZ_CP015726.1|WP_063735449.1|6045094_6047017_+|serine/threonine-protein-phosphatase
MNFTRWSARLPRTQRRTAARSDRAARRPQPAAGGGSVPAARGEHTDSSAGEPPPGAADAAPDIPPPAAVPTLDGLSVHDVLGQVPALVAVVYGPEHRIAYVNEAYADLFGHRTRGVPAGQALPELRELGLLPLMDQVLRSGTPRTVKARRVPAAPEPGPGSAPGTDAEPEAAVTATGRSRHGYYTFTCSPIEMAAPAPGPARAPDPVPAPAHDGAVPDAPAPVAVAVAQTTVTGAEDAAEPVRGVLVFGADVTDQVESAERLRASERLQREAAVTLQRSLLPQELEQPDDLRVAATYQPGGKDAAVGGDWYDVITLGGGRTALVIGDVMGRGVRAAAVMGQLRTAVRAYARLDLPPHEVLQLLDGLAAEIDANQIATCVYAVHDPNESRLVYASAGHLPILVRDPDGTVRRAAEPTGPPLGTGGWLHTSGSVPLGPGASAVLYTDGLVERRDKDIYDGVAALERVFAGATGTPQVMCDRLIRALGITAAHDDDVAVLVLQHPARTGHDAELFHNAALELLGGVEAAPRARAFASGVLASWRFPMELRDLGVLAASELVANSLQHGTPPMRLRLRRTDRRLIIEVTDGDDHLPRRRRAEPVDEAGRGISIVATIASSWGSRRTPGGGKAVWCEFALPAGDP
>NZ_CP015726.1|WP_063735448.1|6047064_6048372_-|MFS-transporter
MTTAMGAALRRIQLGNALSAFGNGFTVPFLFVYVAQVRDLGAHTAGLVLAMFAVAALVVLPFTGRVIDRRGPLSVAVAGAIASAVGSLGLGLAESEPLVLAAAGVLGAGMAVIQPALATLIVWCSTPATRSRAFAMQFFLSNLGLGVGGLLGGLLVDTSSPAGFVRLFAIDAVMFLVLGAAVATVRLPKGPVLDGAVPTEASEGGSGGWRVLLGHRAMVQLCVLGFVLFFACYGQFESGLSAFAVDVAHVSPAMLGVALAANTAAIVLAQFVVLRLVERRRRSRVIALVGLVWTAAWVAAGAAGLVPGSEVMGTAAIISAYALFGLGEAMLSPTVAPLVADLAPSSLLGQYNAAFSLVKQLALAVGPAVGGLMAGAGLYGAYIAGLIVCSLGISVLALRLGGRLSARQDNPLRGAAGPSVPAPRPESSAAVTTAA
>NZ_CP015726.1|WP_063735447.1|6048518_6049070_+|MarR-family-transcriptional-regulator
MADTPDPDDLLTLEQQIAAYQREFQDLDPQVEQVVNALSRLTRRMNVAYSRQSSTLGISNVEFEVLKALVLSGSPYQLGPGELAKRLGLTPAAMTHRIDRLVNEGLVTRERDENNRVRVIVELTTGGREKWLEAMRRASVFEEDLLQDLSSEERGALGELLARVLRRVEEAQPDADGRLNDLG
>NZ_CP015726.1|WP_063737443.1|6056597_6058016_-|ATP/GTP-binding-protein
MADPMTAVTDAFTSFLFGKVETTRLPVRTSTGQAQAVYLPTAAPGLGDSGVIIGREVYSGKGYIYDPFQLYGQQLPAPHWLVLGESGNGKSALEKTYVLRQLRFRDRQVVVLDAQGEDGVGEWNLIAQELGITPIRLDPMAALDGGIRLNPLDPSITTTGQLALLRTIIEVAMGHGLDERSGFALKVAHAYVNETITDRQPVLTDIVEQLRHPEPESAEAMNVDLDDVRAWGLDVALVLDRLVDGDLRGMFDGPTTAGIDLDAPLIVFDLSHIDRNSIAMPILMAIVGVWLEHTWIRPDRKKRIFLVEEAWHIINSPFVAQLFQRLLKFGRRLGLSFVAVVHHLSDVVDGAAAREAAAILKMASTRTIYAQKADEARATGRVLGLPRWAVEIIPTLSPGIAVWDVNGNVQVVKHLITEAERPLVYTDRAMTEDGMAIQLAAEAEAEERAAAAVEAAAEADPYGGPSYGSTVA
>NZ_CP015726.1|WP_063737442.1|6058079_6059642_-|hypothetical-protein
MTVDAQSHAIAPRRTYLIGRARPNAIVGKNRETGEIALIIGGAFIGMMCGLLVPMLTLRIVALVGFPTLALAAVYVPYNGRTFYRWFEINRSYRRSVRKGTTGYRSGAAEAGTRFDGREVEVGPPPGIGRINWLAAPFGPDEIAVLLHADRRTVTAAIEIEGPGVGLRDSEDQEALVDRFGTLLKHVANGDGFVTRLQMLARTLPADPDAHAKDVERRGDNGSPDWLKDSYDQLQSMVSTSSEQHRAYLVACMHYTRDLAAEAQAIARATRRSGGGGRIDKDAGLAVIMARELTDICARLAEADIRVRQPLGQGRLASLIHSMYDPDHPIDHIQAMTKRNAWPAELDAMEPTYLQAKTRESSTREPWCHATAWVKEWPMTPVGVNFLAPLLVHTPDVIRTVAVCMDLEPTEIAIERMLTEKVNDEAEASRAAKMNRTVDPRDIAAHGRLDQRGEDLASGAAGVNLVGYITVSSRSPEGLNRDKRTIRASAGKSYLKLEWCDREHHRAFVNTLPFATGIRR
>NZ_CP015726.1|WP_063737441.1|6059638_6060973_-|hypothetical-protein
MPASPRRRALTLTGILAAVQSTAVLLATRAAAAPSPTPSPSGGDKDCSFLHGTMKENCEKGGGGGGSGPPSDPSNPLDPAASLARGCADAAAWLVGKLSKLVKETANVDFTNEAFLRQYAVVFAASTVLTLILWLLAVAKRAIRGVPLGEALSEAIGFLWLTVLASAFTPLILYTVVTATDAVTDAIASGTGADNDAFFGSFAQALKRDEDIGGGPIMLIVVSLVTILAAGVLCLELVIRAALLYVGALLGTAVYAGLVDKNMWGHVRRWAGIMIAVILVKPVIVIVLALAGALSTSGNDPDAFSAVVSGLSIIILAIFASAMIYRFVPGFGDEIVKARSASADPASRQAAAVISSPAALVKQGINTHSARGGGDGGGGGGRPAQAKPANPVSGGVAAHSSRSSGGGGGGASGASRTGNSGGGSAPAPRSQNNSSGNNPGGDRR

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Crispr_ID: NZ_CP015726_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_9

6390860-6391062

Orphan

Consensus_repeat	Method
GGCTGGGCTGCGACCCCGCCCCCTCCCGCCG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP015726_9

>merge|NZ_CP015726|9|6390860-6391062|PILER-CR
CTGCGACCCCGCCCCCTCCCGCCGGTGACCAGCGACCTTTGCCCGACCCGCTACGCCCGGCGGCCGGTCGGCGGGCGGGGGTGGGTTGCGACCCCGCCCCCTCCCGTCGAGTCGTGACTCCCCGCCGGTGGCCCGGTCTCCGGTCCGGTTCCGGTTCGCCCGGTGGCCGGGCGGCTGGGGCGCGACCTCGCCCCCTCCCGCCG

>NZ_CP015726|9|1|6390860-6391062|PILER-CR
CTGCGACCCCGCCCCCTCCCGCCGGTGACCA	GCGACCTTTGCCCGACCCGCTACGCCCGGCGGCCGGTCGGCGGGCGGGGGTGGG
TTGCGACCCCGCCCCCTCCCGTCGAGTCGTG	ACTCCCCGCCGGTGGCCCGGTCTCCGGTCCGGTTCCGGTTCGCCCGGTGGCCGGGCGGCTGGGGCG
CGACCTCGCCCCCTCCCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063736885.1\|6397170_6397527_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319911
NZ_CP015726.1\|WP_063736872.1\|6386190_6387111_-\|DUF389-domain-containing-protein	unknown	unknown	gnl\|CDD\|129372
NZ_CP015726.1\|WP_063736873.1\|6384687_6386046_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237672
NZ_CP015726.1\|WP_063736865.1\|6394479_6395358_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP015726.1\|WP_063736871.1\|6388399_6390247_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP015726.1\|WP_009715839.1\|6384007_6384511_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP015726.1\|WP_063736869.1\|6391081_6391447_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_064273539.1\|6379745_6382043_+\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|238233
NZ_CP015726.1\|WP_063736870.1\|6390243_6390612_+\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|234610
NZ_CP015726.1\|WP_063736863.1\|6396581_6397103_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP015726.1\|WP_063736874.1\|6381972_6382338_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063736864.1\|6396204_6396546_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319911
NZ_CP015726.1\|WP_009715840.1\|6383522_6383966_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP015726.1\|WP_063736867.1\|6391993_6393232_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP015726.1\|WP_063736862.1\|6397536_6398232_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_079152606.1\|6395312_6396179_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|270700
NZ_CP015726.1\|WP_063736887.1\|6393408_6393825_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP015726.1\|WP_063736866.1\|6393824_6394451_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063736888.1\|6382372_6383239_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_009715836.1\|6387123_6388101_-\|type-I-pantothenate-kinase	unknown	unknown	gnl\|CDD\|235466

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063736885.1\|6397170_6397527_+\|hypothetical-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	5.03762e-07
NZ_CP015726.1\|WP_063736872.1\|6386190_6387111_-\|DUF389-domain-containing-protein	gnl\|CDD\|129372	TIGR00271, Uncharacterized_protein_MJ0678, uncharacterized hydrophobic domain. This domain is in a family of archaeal proteins that includes AF0785 of Archaeoglobus fulgidus and in several eubacterial proteins, including the much longer protein sll1151 from Synechocystis PCC6803.	2.86101e-51
NZ_CP015726.1\|WP_063736873.1\|6384687_6386046_+\|phosphoglucosamine-mutase	gnl\|CDD\|237672	PRK14318, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP015726.1\|WP_063736865.1\|6394479_6395358_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	2.30087e-17
NZ_CP015726.1\|WP_063736871.1\|6388399_6390247_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP015726.1\|WP_009715839.1\|6384007_6384511_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	4.58648e-74
NZ_CP015726.1\|WP_063736863.1\|6396581_6397103_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.0010266
NZ_CP015726.1\|WP_064273539.1\|6379745_6382043_+\|chloride-channel-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	1.63829e-72
NZ_CP015726.1\|WP_063736887.1\|6393408_6393825_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	7.26965e-14
NZ_CP015726.1\|WP_063736870.1\|6390243_6390612_+\|holo-ACP-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	1.60159e-49
NZ_CP015726.1\|WP_063736864.1\|6396204_6396546_+\|hypothetical-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	8.27035e-07
NZ_CP015726.1\|WP_009715840.1\|6383522_6383966_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.38198e-101
NZ_CP015726.1\|WP_063736867.1\|6391993_6393232_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.21185e-06
NZ_CP015726.1\|WP_079152606.1\|6395312_6396179_+\|phosphotransferase	gnl\|CDD\|270700	cd05151, ChoK-like, Choline Kinase and similar proteins. This subfamily is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate and displays negligible activity towards N-methylated derivatives of Etn. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	0.00500424
NZ_CP015726.1\|WP_009715836.1\|6387123_6388101_-\|type-I-pantothenate-kinase	gnl\|CDD\|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0

>NZ_CP015726.1|WP_063736870.1|6390243_6390612_+|holo-ACP-synthase
MIVGVGIDVAEIDRFAAALDRTPGMASRLFVPAELHLPSGERRGIASLAARFAAKEAVAKALGAPGGLRWTDAEVRTEPGGRPSLSVRGTVAARAAELGVRSWHVSLSHDAGVASAVVIAEA
>NZ_CP015726.1|WP_063736871.1|6388399_6390247_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYVGGQSALDVVLAGLKRLEYRGYDSAGVAVLADGGLAAAKKAGKLANLEKELSDRPLPSGNTGIGHTRWATHGGPTDANAHPHLDNAGRVSVVHNGIIENFAALRAELADRGHELSSETDTEVVAHLLAESFSSCGDLAESMRQVCRRLEGAFTLVAVHADAPDVVVGARRNSPLVVGVGEDEAFLASDVAAFIAHTREAIELGQDQVVEARRDGVVVTDFDGAPAEVRPYHVDWDASAAEKGGYDYFMLKEIAEQPKAVADTLLGRIDLAGNLCLDEVRIPASVLREVSKVVIVACGTAYHAGMIAKYAIEHWTRIPCETELASEFRYRDPILDQRTLVIAISQSGETMDTLMALRHAREQGAKVLAICNTNGSTIPRESDAVLYTHAGPEVAVASTKAFLTQLVACYLVALYLGQVRGTKWGDEILSVIRELSEIATQVDEVLETMEPVRELARSLASKNTVLFLGRHVGFPVALEGALKLKELAYMHAEGFAAGELKHGPIALIEQDVPVVVVVPSPRGRSVLHDKIVSNIQEIRARGARTIVIAERGDEAVAPYADHLIEIPVTPTLLQPLVATVPLQVFACELATARGNEVDQPRNLAKSVTVE
>NZ_CP015726.1|WP_009715836.1|6387123_6388101_-|type-I-pantothenate-kinase
MRAAQRRGGEATPYVDLSRAEWSALREKTPLPLSAEEVERLRGLGDVIDLDEVRDVYLPLSRLLNLYVAATGNLRGALNTFLGDAKNGQGPQTGTPFVIGVAGSVAVGKSTTARLLQALLARWPEHPRVELVTTDGFLYPNAELHRRGLMSRKGFPESYDRRALTRFVADVKAGRAEVSAPVYSHLIYDIVPGERLTVHRPDILIVEGLNVLQPALPGKDGLTRVGLADFFDFSVYVDARTTDVERWYLNRFRKLRQTAFQDPSSYFRKYTQVSEEEALDYGRMIWRTINKPNLQQNVQPTRGRATLVLRKGPDHKVQRLSLRKL
>NZ_CP015726.1|WP_063736872.1|6386190_6387111_-|DUF389-domain-containing-protein
MLHLRLIVPADRTDDVVRLLEGTVGATHLIVMPGAAREPAGDVVLCDVAREAGDGLLGELRALGLDEHGSIAVDDIGLSLSKRADRAEAEAPGEGADAVLWEHLTDATHEESTLSVTFLAFLTIATMIAACGVVLDNAVLIVGAMAVGPEFGPLAGLCTALVRRAPRLAARSGVALIVGFVVAMVLTTGFSVLMDAFGLFSRDLLDADRPNTDFIWKPDMFSFVVAVLAGIAGTLSLTSAKSGALVGVAISVTTVPAAANAAVALGYGEVEQMVGSSEQLLLNLAGIVVAGTLTLLAQRWLWARRG
>NZ_CP015726.1|WP_063736873.1|6384687_6386046_+|phosphoglucosamine-mutase
MGRLFGTDGVRGVANADLTAEMALGLSVAAAHVLAEVGTFEGHRPVAVVGRDPRASGEFLEAAVVAGLASAGVDVLRVGVLPTPAVAHLTGSLDADLGVMLSASHNPMPDNGIKFFARGGHKLADELEDRIETTYRSHASGEPWDRPTGAGVGRVRDYAEGFDTYVAHLVGVLPNRLDGLKVVVDGAHGAASRVSPEAFARAGAEVVTIGTEPDGLNINAGCGSTHLARLQAAVVEHDAALGVAHDGDADRCLAVDSVGREVDGDQILAVLALAMREAGTLRGNTVVGTVMSNLGFKLAMRREGVELVQTAVGDRYVLEEMKEHGYALGGEQSGHVIALDHATTGDGTLTGLLLAARVAATGRTLADLAGVMERLPQVLINVPDVDKSRVASSADLAAAVAEAERELGETGRVLLRPSGTEPLVRVMVEAADIDQARSVAGRLADAVKSALG
>NZ_CP015726.1|WP_009715839.1|6384007_6384511_+|30S-ribosomal-protein-S9
MAETTAETPLDVEEYTTESVETIESEYTSESLASRFGDPQPAAGTGRRKNAIARVRIVPGSGQWKINGRTLEGYFPNKVHQQEVNEPFKVLELDDRYDVIARISGGGVSGQAGALRLGIARALNEADVDNNRGPLKKAGFLTRDDRATERKKAGLKKARKAPQYSKR
>NZ_CP015726.1|WP_009715840.1|6383522_6383966_+|50S-ribosomal-protein-L13
MRTYSPKPGDVQRQWHVIDATDVVLGRLATQAATLLRGKHKPVYAPHVDAGDFVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLEKNPEKAVEKAIKGMIPKNTLGRQMLSKLKVYSGDQHPHAAQQPVPFEITQVAQ
>NZ_CP015726.1|WP_063736888.1|6382372_6383239_-|hypothetical-protein
MSFGQGGPYGPGGSQPPQQRQSSQTPDWAAMADHTATRGRRRRWLFIGGAVLATAAVGAMVATAVVSSNDKDGSSDDSAKHLPSQPTLPRESESPEPSFSNVAPPAPPKPLDIISDAKRDKAPLSAKTLFPDEEAAKEGRSYAKAATSSTASCAAGTQGSLGSVLSGNGCRKLLRATFSKDGVAVTIGVAVFDGRASAEKAKNGYKPNVASLSGGGVPAFCRQTACRTSANAIGRYAYFTISGYTSGKKVTTSDTQALQAGRDMADYTFRRILARGNAQASAAAGSNG
>NZ_CP015726.1|WP_063736874.1|6381972_6382338_-|hypothetical-protein
MAELVGFRLGDGTASVIVEVEDDEPGVRLAAGGRNGIPDASATFDAGFARVREAAARALAQLSALPERPSTVELEFGVKLSAQAGAVIAKTGVDGHLRIKMIWERDRDRPAAEDEGADEDG
>NZ_CP015726.1|WP_064273539.1|6379745_6382043_+|chloride-channel-protein
MPSLRYGGSGRKKWLPGDEPGGDTLARWALLAVGIGAVAGLGAAGLFGLLKLGTHWVLGELGGYHPYRTTVEGGFDVASSFERPWAVPLVVAGGALAAAALVRWLAPEAGGHGTDAAIAAAHHAPLSMRGRVTIVKMVASALTIGSGGSAGTEGPAAQISAAFGSVFARRARLTPAQARTAVVIGLAAGVGAVFRAPLGGALLGAELLYRKDADVSVVPKALLASAAGYAAFGLCFGFGPVFGEHAVSGAIGLGDLPLLVVIGLLAGGAGRLYAAAFYWVHDRVEPRSRTTLRKLLFPVAGGLAVGCLGLLVPGVLGTGYGLMEGEMERDVLLGLSLWAVLLVPLAKIVGTALTVGSGASGGIFGPGFVIGAGVGAAVWRLAEPLGLAPQSPAMFVIVGMAACLGPVVRAPVAVLVMAVETGGDSGLLGPGVIGVLSAALVMGGVTIYRSQLDRREEKGPVTELTAVIPPEDATPGPATAPSADAVRAAAGSGGAARADAALGETTRGAASLSGAAPGDAAVADEPRGGDAASGDGPLGTAASGDAAFAAAASAEVARADAFLAGAAPGDAAVADEPRGGDAASGDGPLATAASGDTAFAAAAPAEVARADAFLAGAAPGDAAVADEPRGGDAASGDGPLATAASGDTAFAAAGPGDAARADAALGETPRGAAPLAAAAGPGDAARADAALGETPRGAAPLAAAAGPGDAARSAEGRIDAELVETPLGDAALGDAAALGEAPVSRPRPRPRPPRRVGRDRAPKSF
>NZ_CP015726.1|WP_063736869.1|6391081_6391447_-|hypothetical-protein
MPQTEGARLFREAWIAGVRRHFPGEPKPGYVTPWEDTPDWERAAAGAVYDQVRQFLDLSAGHASRLTREQKSRFVATCWTAQMYRHFDDPKPGYVADWPELPDWQRETDADIFEAIEKAVS
>NZ_CP015726.1|WP_063736867.1|6391993_6393232_-|helix-turn-helix-transcriptional-regulator
MGVNVILKRRLVELGLTQDELARQMNDAIEEITGRPGDVSARTVRNLVNGSTTRPIGRTCAALAKVFGCSVDDLGFASPRTAAPQEDPVRRRTFMTSAAGAAVVPGLGAPRRVGHSDVKRLEATFAAIIAQDHRYGGRVSIETQASDLADEALSLLQRGTASQRVRNSIYACAASFTSSALWAAIDGRRFDAALRYVDRASSLAVMSGDLTIQFRIWSHAGTLYRHLGRPVDALAANDVARNLPITRRDPLFASLGHARHAAIYGLTRDAVAVERTLGHAQAAFGRADAGIDRPAWMTAFFGQAEIESLALTAHLGLGSFAQAEAHAHRSIALLRPHMRRSRAIATARLAHAQLGQGDLEPSVSTAMTIPTGSHPRVSRMLDGFGDRLRATAPRSGAAKTWGAYIDSRRDAS
>NZ_CP015726.1|WP_063736887.1|6393408_6393825_+|ATP-binding-protein
MTVTRPIAIGAPGYSETMPCEPESASRARRLVRAALNTWDLGPLVEDGTLIISELVGNAARHSGCRLLRVSVRLPDRDRVRLAVTDKCLQPTTAQAPGSDDESGRGLLLVDALADRWDTEYRAWGKIVWAELRARGDS
>NZ_CP015726.1|WP_063736866.1|6393824_6394451_+|hypothetical-protein
MPPLIARPTVVPFVTAWSGEHLGSESELTVLLTPEPRLGYKTSRPTDRDTAGALWARMTHAPGTGRPIYDSMHIARQRICMYAMKCQICGNPASRNKDGWLFINWRRTWDSPTWPEGSLTEQPPLCEPHARMSIEQCPHLGRGDYAVLRVRTPRLWGISGANYQLTRSGWRARESNVMVPYGHIGLNAVLASRMIRELRNVTVIDLPK
>NZ_CP015726.1|WP_063736865.1|6394479_6395358_+|radical-SAM-protein
MTAIVAANPATDTGFLWLDLTRKCQLSCTPCFNASGPDGTHGTMTRENWLRVLDQAAECGVRRVQLIGGEPTLHPDGLALAERALSLELCVEVYSNLVHVTDDWWALLRRKGASLATSYYSDQADEHNAVTGRPSHARTLANVKKAVRLGVPLRVGIVATTATQRVSEARRELEALGVKRISIDHVRPFGRGAHGQAPDTSGLCGRCGSGRAAVGPDGNVSPCVFSAALLSVGNVRSAPLATILGSPAMAEVRASIHSAVAKGGGEDEDGCDPVGDGECSPGYPSSSCGPRN
>NZ_CP015726.1|WP_079152606.1|6395312_6396179_+|phosphotransferase
MLPRISEQFVRPEELMDSDSPGTEALWALVRPHTGEQRGVEPTSRGNGSDVTAVVTCENGPVFVKACRNRPGGRRASILRERLVNPSVHAVSPKLMWHAQDDAWIALGFESVEGRSSDFTPGSADLPRIVGALNRIRDLPVPPEADDWRETRWNRFADDMDAELFEGDTLLFTDVNPHNFMIGDERIWVVDWAWPTRGAGFIDPACLVVQLIAAGHTAEAAEGWAAVCRAWADADSAAIDAFAAATLRMNRSRADRYPEAAWLEDMAAAAQAWAVHRGVAEAPGQVMR
>NZ_CP015726.1|WP_063736864.1|6396204_6396546_+|hypothetical-protein
MAIESVVVRQRVEDLDAAVPFYEKLTGSAASRFAFGGVVLASVGPFLLFSGPDEAVRRVVGVAATLAVADLDESVGNAVAGGAEVVAPSAPTPNGHRAVLRHPHGGVYEYVGP
>NZ_CP015726.1|WP_063736863.1|6396581_6397103_+|GNAT-family-N-acetyltransferase
MDGAAAGRAEDAFTLVYAEAFAEPPYDKESDSVEANFRRFRSQVRKKAFRGALARTGDGEPVGIAYGYPLSPQTGWWDRLTTPVTDELRREDGRRTFGLMELAVRAPWRRLGVARRLHEAVLADGTEERVLLNARPDVEAAQAAYRSWGYRKVGEAHPWDGADLHDVMVLDLS
>NZ_CP015726.1|WP_063736885.1|6397170_6397527_+|hypothetical-protein
MGDEAVAIESVVVRQRVEDLDAAVPFYERLTGSTASRFAFAGVTLASVGPFLLFSGPDEAVRRVAGVAATLAVGDLDAAVEDAVAGGAEVVAPSAPTPNGHRAVLRHPHGGVYEYVGP
>NZ_CP015726.1|WP_063736862.1|6397536_6398232_-|hypothetical-protein
MTASKTAIGRDDLRVKIAVQRMRMGGEEFRVIRPAAPLNNGALYETGGRYELYVDRTDGRRIGTLWLLAARSPRSLVYLPLRATPTAPGIGWRDEKPLDLVLAHKSLQFRPSRWKRLRERIAAGNAPREPGTASVPERDLQSDHAQRNPDLLRQHVHSETLFLTGTTRTYRESARHVFAVTNEGPPAAATQLYLPGPGCNYHACRSLYVWQGPQAHDWQDLHVTYTPRWVR

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Crispr_ID: NZ_CP015726_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_10

7385248-7385413

Orphan

Consensus_repeat	Method
CGGGGCTGCGCCCTCGGCCTCAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP015726_10

>merge|NZ_CP015726|10|7385248-7385413|CRISPRCasFinder
GGGGGCTCCACCCCCGGCCCCCACCGGGGCTGCGCCCTCGGCCTCACGCGGGGTTGTGCCCCTGGGCCCCGGTCGGGGCTGCGCCCTCGGCCTCACCTGGGGTTGTGCCTCTGGTCAGCCTGAGGGTGCGCCTGGCTCTGAGTTGGGGCTGTGCCCTGGGCCCCGC

>NZ_CP015726|10|9|7385248-7385413|CRISPRCasFinder
GGGGGCTCCACCCCCGGCCCCCA	CCGGGGCTGCGCCCTCGGCCTCACGCGGGGTTGTGCCCCTGGGCCCCGGT
CGGGGCTGCGCCCTCGGCCTCAC	CTGGGGTTGTGCCTCTGGTCAGCCTGAGGGTGCGCCTGGCTCTGAGT
TGGGGCTGTGCCCTGGGCCCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063727910.1\|7384669_7385221_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_009715002.1\|7386384_7387140_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|130314
NZ_CP015726.1\|WP_079151792.1\|7382087_7382537_+\|DUF2550-domain-containing-protein	unknown	unknown	gnl\|CDD\|378486
NZ_CP015726.1\|WP_063727901.1\|7377541_7379113_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NZ_CP015726.1\|WP_063727916.1\|7394287_7395319_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366009
NZ_CP015726.1\|WP_063727898.1\|7376636_7377452_+\|F0F1-ATP-synthase-subunit-delta	unknown	unknown	gnl\|CDD\|237387
NZ_CP015726.1\|WP_009715003.1\|7385788_7386361_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
NZ_CP015726.1\|WP_063728485.1\|7382562_7383198_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP015726.1\|WP_009714995.1\|7392983_7393655_-\|endonuclease-NucS	unknown	unknown	gnl\|CDD\|235114
NZ_CP015726.1\|WP_009714999.1\|7388744_7389593_+\|3-hydroxyacyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|224170
NZ_CP015726.1\|WP_009715014.1\|7376076_7376640_+\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NZ_CP015726.1\|WP_009715015.1\|7375794_7376040_+\|ATP-synthase-F0-subunit-C	unknown	unknown	gnl\|CDD\|169138
NZ_CP015726.1\|WP_063727904.1\|7380034_7381477_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NZ_CP015726.1\|WP_009714994.1\|7393857_7394250_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_009714998.1\|7389751_7390075_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP015726.1\|WP_009715009.1\|7381588_7381966_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|234796
NZ_CP015726.1\|WP_063727914.1\|7390250_7392815_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP015726.1\|WP_039937598.1\|7395523_7395841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063727903.1\|7379115_7380030_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|235535
NZ_CP015726.1\|WP_063727912.1\|7387157_7387940_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063727914.1\|7390250_7392815_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.60906e-07
NZ_CP015726.1\|WP_009715002.1\|7386384_7387140_-\|ABC-transporter-permease	gnl\|CDD\|130314	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein. This model describes daunorubicin resistance ABC transporter, membrane associated protein in bacteria and archaea. The protein associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	3.26599e-22
NZ_CP015726.1\|WP_079151792.1\|7382087_7382537_+\|DUF2550-domain-containing-protein	gnl\|CDD\|378486	pfam10739, DUF2550, Protein of unknown function (DUF2550). This family is conserved in Corynebacterineae. The function is not known though most members are annotated as either secreted, or membrane, proteins.	3.62055e-48
NZ_CP015726.1\|WP_063727901.1\|7377541_7379113_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_CP015726.1\|WP_063727916.1\|7394287_7395319_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|366009	pfam00296, Bac_luciferase, Luciferase-like monooxygenase.	4.03843e-54
NZ_CP015726.1\|WP_063727898.1\|7376636_7377452_+\|F0F1-ATP-synthase-subunit-delta	gnl\|CDD\|237387	PRK13430, PRK13430, F0F1 ATP synthase subunit delta; Provisional.	4.2683e-107
NZ_CP015726.1\|WP_009715003.1\|7385788_7386361_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	1.47449e-77
NZ_CP015726.1\|WP_063728485.1\|7382562_7383198_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.37158e-66
NZ_CP015726.1\|WP_009714995.1\|7392983_7393655_-\|endonuclease-NucS	gnl\|CDD\|235114	PRK03298, PRK03298, endonuclease NucS.	5.5711e-177
NZ_CP015726.1\|WP_009714999.1\|7388744_7389593_+\|3-hydroxyacyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|224170	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism].	1.3259e-124
NZ_CP015726.1\|WP_009715014.1\|7376076_7376640_+\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	1.67513e-39
NZ_CP015726.1\|WP_009715015.1\|7375794_7376040_+\|ATP-synthase-F0-subunit-C	gnl\|CDD\|169138	PRK07874, PRK07874, ATP synthase F0 subunit C.	3.93264e-17
NZ_CP015726.1\|WP_063727904.1\|7380034_7381477_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_CP015726.1\|WP_009714998.1\|7389751_7390075_+\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	6.36093e-22
NZ_CP015726.1\|WP_009715009.1\|7381588_7381966_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|234796	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated.	8.82235e-39
NZ_CP015726.1\|WP_063727903.1\|7379115_7380030_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	2.42519e-137
NZ_CP015726.1\|WP_063727912.1\|7387157_7387940_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.30376e-98

>NZ_CP015726.1|WP_063727910.1|7384669_7385221_+|hypothetical-protein
MIVALIIACEVGFWVLLAVGLALRYVAKMPRASVVVLLCEPMLELVLFVATAIDLRNGAEPDMRHGIAAAYIGFSVALGHQTIKWADARVAHRFFDGPPPVKPPRYGMARAVHEWKTAARWMLAAVIAMALLQGAIWYVGDDGDVGSLREWQTRMLFMIGINIVIALSYTLWPKRERSDSATG
>NZ_CP015726.1|WP_063728485.1|7382562_7383198_-|response-regulator-transcription-factor
MRVLVAEDQAAVRSGLVLILRSAPGIEVVGEAIDGEQAVALARALRPDVVLMDVQMPRLDGVSATRQVVAEGLADVLVLTTFDLDEYVFGALRAGAAGFLLKDSDAARLVEAVRTVARGEGLIAPAVTRRLIEEFARSGAATTADPSVLAVLTPREREVLGCLGQGMSNAEIATQLTMAEATVKTHVSRLLGKLELRSRVQAAVLAQELGV
>NZ_CP015726.1|WP_079151792.1|7382087_7382537_+|DUF2550-domain-containing-protein
MVLALLVSGVVVALVVAGLFVFGLRRRLIQRSGGTFDCSMRWGAPGPEAEPSGKGWVYGIARYDGDRIEWFRVFSYAFRPRRTLERASIEVLERRTPKGEEELALLSDAVILACRHNGTRLELAMSDDALTGFLAWLEAAPPGQRVNVA
>NZ_CP015726.1|WP_009715009.1|7381588_7381966_+|F0F1-ATP-synthase-subunit-epsilon
MAAELHVEMVAADRSVWSGTATLVIARTTSGDIGVMPGHQPLLGVLESGPVTIRTSDGGTVVAAVHGGFISFSDDKLSLLAEVAELSDEIDVKRAERALERAKSEADAAAERRADVRLRAVAGVH
>NZ_CP015726.1|WP_063727904.1|7380034_7381477_+|F0F1-ATP-synthase-subunit-beta
MTTTVETATATGRVARVIGPVVDVEFPVDAMPEIYNALTVEIADPAEDGAKKTLTLEVAQHLGEGLVRAISMQPTDGLVRQAPVTDTGTGITVPVGDVTKGRVFNTLGQILNEPEAESEVTERWAIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGGKIGLFGGAGVGKTVLIQEMIMRVAKLHEGVSVFAGVGERTREGNDLIEEMAESGVLPQTALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGILQERITSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTVLSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYDCASRVKSILQKYKDLQDIINILGIDELGEEDKLTVFRARRIERFLSQNTHAAKQFTGLDGSDVPLDESIAAFNAIADGEYDHFPEQAFFMCGGLDDLKAKAKELGVS
>NZ_CP015726.1|WP_063727903.1|7379115_7380030_+|F0F1-ATP-synthase-subunit-gamma
MGAQVKVYKRRIKSVSATKKITKAMEMIAASRVVKAQRQVAASTPYATELTRAVGAVAKGSTTQHALTTETENPTRAAVLLITSDRGLAGGYSSNVIKAAEQLTERLTGEGKEVDTYIVGRKGVAYYGFRERKVTESWTGFTDNPTYADAKKIAGPLIEAVLQETADGGVDELHIVFTEFVSMLTQTPVQDRLLPLSLEEKAEEQQKKGEILPLFEFEPSSEDVLDALLPRYVEARIYNALLQAAASKHAATRRAMKSATDNADELIKSLTRLANAARQADITQEISEIVGGASALADASAGSD
>NZ_CP015726.1|WP_063727901.1|7377541_7379113_+|F0F1-ATP-synthase-subunit-alpha
MAELTIRPEEIRDALENFVQAYKPDAASREEVGTVSVAGDGIARVEGLPSAMANELLKFEDGTLGLALNLEEREIGAVVLGEFSGIEEGQQVHRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEIETEGRRALELQAPTVMDRKSVHEPMETGYKAVDAMTPIGRGQRQLVIGDRQTGKTALCVDTIINQRDNWRSGDPKKQVRCIYVAVGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFKYLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDERGSGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNANQRPALNVGISVSRVGGSAQHKAMRQVSGRLRVDLAQYRELEAFAAFGSDLDAASKASLERGARMVELLKQGQYAPYSTEDEIVSIWAGTNGKMDDVPVTDVRRFERELLDYLHREHKGLLTSIVEGGKMSDDTIAALGEAVDSFKKQFETSDGKLLGEG
>NZ_CP015726.1|WP_063727898.1|7376636_7377452_+|F0F1-ATP-synthase-subunit-delta
MNGASREALAAARERFDALTDNTSVDAAKLADELAAVTALLDREVSLRRVLTDPAQPGEAKAELAQRLLSGQVGGEAVDLVAGMVRSRWSRSRDLADAVEELASSADLVAAQRVGTLDDVEDELFRFGRIIASSSELRSALADRRASGTAKAGLVRELLGGRADRVTERLVVRLVTQPRGRSLEAGLDELSKLAAARRDRMVAVVTSAVPLSDRQKERLGAALASVYGHTVHLNLDVDPEVLGGVEVRIGDEVINGTIADRLEEASRRMAG
>NZ_CP015726.1|WP_009715014.1|7376076_7376640_+|F0F1-ATP-synthase-subunit-B
MIALVNLAEEEAQNPLLPPLPELVIGLIAFAIVFIFFAKKLLPNINRVLDERRAAIEGGMEKAEATQAEAQQVLEDYRAQLADARHEAARLRQEAQEQGAALIAEMRAEGQRQREEIIAAGHAQIEAERKQAGTALRQDVGKLATDLAGKIVGESLEDVARQSRTIDRFLDDLEAKAADGSKAEAGR
>NZ_CP015726.1|WP_009715015.1|7375794_7376040_+|ATP-synthase-F0-subunit-C
MSALQTLAAAETVHGSVGAIGYGLAAIGPGVGVGIIFGNGTQAMARQPEAAGLIRANQILGFVLCEALALIGLVMPFVYGQ
>NZ_CP015726.1|WP_009715003.1|7385788_7386361_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MVNLTRIYTRTGDKGTTSLGDMSRTDKTDLRIAAYADANEANAALGVAIALGSLPAEITDVLVRVQNDLFDVGADLSTPVVENPEHPPLRVEQGYIDKLEADCDRFLEDLEKLRSFILPGGTPGAALLHQACTIVRRAERATWAAFAEHGDSMNPLTATYLNRLSDLLFILARSANKKVGDVLWVPGENR
>NZ_CP015726.1|WP_009715002.1|7386384_7387140_-|ABC-transporter-permease
MPHVIADTALIFRRHLRQTLRSKPAMVFGLVQPLLFLVFFGPLLTGIPLGGEGDSWQTIVPGILIQLGMFSASFAGIGIIFEKRMGVIERMRVTPVSRLALLMGRVLKDVVQLLVQSVVVVLVAVAMGLRAPLPGILIGFGFVAALTVSLASLSYALAMRVESPQGFAPVINSVTMPAMLLSGILLPMSLGPRWLDIASHFVPFRYLVDGVRAAFAGDYGDGKIGLACLVATGLAAVAVTLGTRLFRQAGA
>NZ_CP015726.1|WP_063727912.1|7387157_7387940_-|ATP-binding-cassette-domain-containing-protein
MPVITTSGLARTFRTKRGPVEAVRGIDLTVEAGEILGFLGPNGAGKTTTLRMLTTLLPPTGGTATVAGHDLAADPAGVRRRIGYVAQSGGVDPTVSVREELVTQGRLYRLPQPDALARAGELARELDLTELLDRRCAALSGGQRRRLDIALGLVHRPEILFLDEPTTGLDPAGRADLWELIRGLRAEHGMTVFLTTHYLDEADALADRLVVVDQGRIAAEGTAERLKTEYGGSPDATLQDTFIAITGRRTAPRDPAPLTV
>NZ_CP015726.1|WP_009714999.1|7388744_7389593_+|3-hydroxyacyl-CoA-dehydrogenase-family-protein
MAKKLAVIGAGLMGSGIAQVSAQAGWDVVLRDVTDEALRRGTDGIRASYEKFVSKGKLDAAEAEQALARITTTTDLDAAADADVVVEAVFERIDVKREIFRTLDGLVKDDTILASNTSAIPITKIAAATERPERVVGTHFFSPVPMMQLCELVRGYKTSDETLATAREFAEGVGKTCIVVNRDVAGFVTTRLISALVVEAAKLYESGVATAEDIDIACKLGFGHAMGPLATADLTGVDILLHATDNIYTESQDEKFAPPEIMRRMVDAGDIGRKSGGGFYRY
>NZ_CP015726.1|WP_009714998.1|7389751_7390075_+|STAS-domain-containing-protein
MHIRGDHAELVVGGRLDVRSAADARTALHTAVDSGGGDLVLDLTELDSWDATGLGVIMGAHRRAGRAGRRLVLRGVPPQMQRLLVATRLHRILAIEGGLEAETLPRV
>NZ_CP015726.1|WP_063727914.1|7390250_7392815_+|hypothetical-protein
MEQHNRAAHEHGHDDPSLRSAEAAAAPQPPRDADAPAVPAARSGSPAVPALPVRGALPVRGGSKAVEGTAEPAPVRTVRIVTGDHLLTVNPVDGSEIEPCPPGERHARPERHTPDQRAELRRAAAPPRPSGTVVPDLPMLERDEERERLARLLARGRSVRVTGPSGAGRSVLLEAVAADCERLAPDGVVRLSGYRRTSTDLLYDLYAAVYRAPLYRPERGELLEAVQEIGAVVVLDDVEFGGTALDEFLDATPECAFLVSATPDVAAPSADSHLEEIFLSGLSRTAGLELLERAVRRPLEEDEASWAADLWFESEGLPLRFVQAGALLRQREAAVVEGTDDEPRDAMPLPSLTSAAAPATLLTAALGEAARDALRFAVALGGECPHQAHLPALTEDHPHADAALGELLAHGLVTTVGPHYRLAAGVAAQLAADGYAGDAAETAGRAHTVAQHYTWWAGHPSVAPERVAVEADAILAAMAALVADRESGHADAAVDLARAAAPAFAAALHWGAWERAVRHGQEAARLAGQVADEAYFHHELGVLALCTGNLDRARAELEASIGLRGALADKSGMVAGRRALALVSDRKGAAMTNAFGPGVVRPRTEEPEPTPTPVPGENATTTITPVVAETTKLPPVAPVAATAALPTPPPAASPPAKRGPKVLRGLAPTGARRNLAAAGAGALLVAVLGTVVTLGALGDDDGKDSPDRVKPRESASQQDDDKDLTADEPSDTPGRQTPRPGLSNVPLSSPSSAPTNSGSPSGSTGPTDPSTSGDPSQPQSPSAPSSQPTTNEPTHEPTNTPTTRPTPPTTPPTHAPTNTPTTEPTSPTNTASNTAGGPPPSNGAPTPPSTAATA
>NZ_CP015726.1|WP_009714995.1|7392983_7393655_-|endonuclease-NucS
MPTMRLVIARCSVDYAGRLTAHLPSAPRLILVKADGSVSIHADDRAYKPLNWMSPPCTLKEGDDNVWTVVNKAGEKLIITMEDVLHDSSHELGVDPGLIKDGVEAHLQELLADRIETLGDGWTLIRREYPTAIGPVDILCRDADGTTVAVEIKRRGEIDGVEQLTRYLELLNRDPHLAPVKGVFAAQEIKPQARVLATDRGIGCAVLDYDALRGIEDDKLRLF
>NZ_CP015726.1|WP_009714994.1|7393857_7394250_+|hypothetical-protein
MSLDVSPALLEQAERGEVDEAAFVDCVRNSLPYAWEMISSLVAQLKVDGGEFADNQTPPPDEQARGQLLRALASDAIRGALQRHFGVRLAFQNCHRVAVFPLDASSDDRLARFTSIRGQLLNQSPELRDC
>NZ_CP015726.1|WP_063727916.1|7394287_7395319_-|LLM-class-flavin-dependent-oxidoreductase
MRVGAFILAAQFPGQGQEEALHRAVRSAELSEDAGLDAVWLAEHHFVPYGVCPSAVTLAALLLGRTRRIGVGTAVSVLPTAHPVALGEQAALLHLSSGGRFTLGVGRGGPWVDLEVFGAGLGAYEHGFPEALDLLLRWLREPRVGADGERFSFREVPVVPRPDDPGTTGTPPVIMACTSPASVRLAAERGLPMLLGMHCGDEEKAEAVGLWKKSALAAGRSPDEVAAVAAEHVSAGVVQIEDARPAAAETLTKAMPGWLRQGLGAHVTVDGRERRMRDPVGYAELLCALHPVGPPRLCADRLAATAERTGITRFALMVEGSGDLAATEQNVRRLGGEVLPLLL
>NZ_CP015726.1|WP_039937598.1|7395523_7395841_+|hypothetical-protein
MSPRRNRSRGGEKPVDRMGTDRYGLERTESWQGEEWVVRLVGGGGSGKHYRCPGCDQEIPPGVPHVVAWQQHMGVDDRRHWHKACWNARDRRSAKLQRSRNAPRY

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Crispr_ID: NZ_CP015726_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_11

8236705-8236778

Orphan

Consensus_repeat	Method
GCCAGGCCGAGCTGATCGCCGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_11

>merge|NZ_CP015726|11|8236705-8236778|CRISPRCasFinder
GCCAGGCCGAGCTGATCGCCGACCGGCTGGTGGACGAGTTCTGCCACGAGGGCGAGGCCGAGCTGATCGCCGAC

>NZ_CP015726|11|10|8236705-8236778|CRISPRCasFinder
GCCAGGCCGAGCTGATCGCCGAC	CGGCTGGTGGACGAGTTCTGCCACGAGG
GCGAGGCCGAGCTGATCGCCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_079152016.1\|8232651_8233617_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP015726.1\|WP_063730777.1\|8246131_8247115_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP015726.1\|WP_063730790.1\|8229183_8230044_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063730786.1\|8233799_8234453_+\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	unknown	unknown	gnl\|CDD\|188632
NZ_CP015726.1\|WP_063730780.1\|8240792_8242010_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP015726.1\|WP_063730776.1\|8247111_8248002_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP015726.1\|WP_079152036.1\|8230092_8230923_-\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	unknown	unknown	gnl\|CDD\|274422
NZ_CP015726.1\|WP_009714239.1\|8250125_8250845_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP015726.1\|WP_063730785.1\|8234598_8235447_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270231
NZ_CP015726.1\|WP_159073561.1\|8235539_8236052_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063730782.1\|8239109_8240321_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP015726.1\|WP_063730775.1\|8247998_8249018_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP015726.1\|WP_154685920.1\|8231010_8231187_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063730779.1\|8242114_8244073_-\|cellulase-family-glycosylhydrolase	unknown	unknown	gnl\|CDD\|226444
NZ_CP015726.1\|WP_063730781.1\|8240381_8240759_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133388
NZ_CP015726.1\|WP_079152015.1\|8244364_8246110_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173874
NZ_CP015726.1\|WP_063730788.1\|8231183_8231840_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
NZ_CP015726.1\|WP_063730791.1\|8228615_8229089_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP015726.1\|WP_063730783.1\|8238585_8238960_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063730787.1\|8232008_8232434_+\|ribonuclease	unknown	unknown	gnl\|CDD\|238340

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_079152016.1\|8232651_8233617_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	1.60448e-91
NZ_CP015726.1\|WP_063730777.1\|8246131_8247115_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.91658e-101
NZ_CP015726.1\|WP_063730776.1\|8247111_8248002_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	9.59749e-73
NZ_CP015726.1\|WP_063730786.1\|8233799_8234453_+\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	gnl\|CDD\|188632	cd00452, KDPG_aldolase, KDPG and KHG aldolase. KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.	2.4583e-65
NZ_CP015726.1\|WP_063730780.1\|8240792_8242010_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	5.61089e-73
NZ_CP015726.1\|WP_079152036.1\|8230092_8230923_-\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	gnl\|CDD\|274422	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083. This protein family pulls together several groups of proteins, each very different from the others. They share in common three conserved regions. The first is a region of about 38 amino acids, nearly always at the N-terminus of a protein. This region has a bulky hydrophobic residue, usually Trp, at position 29, and a His residue at position 37 that is invariant, so far, in over 150 instances. The second conserved region has a motif [DE]xxxHxxD. The third conserved region contains a hydrophobic patch and a well-conserved Arg residue. Most examples are found in the Actinobacteria, including the genera Mycobacterium, Corynebacterium, Streptomyces, Nocardia, Frankia, etc. The pattern of near-invariant residues against a backdrop of extreme sequence divergence suggests enzymatic activity and conservation of active site residues.	2.37701e-13
NZ_CP015726.1\|WP_009714239.1\|8250125_8250845_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.54662e-63
NZ_CP015726.1\|WP_063730785.1\|8234598_8235447_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270231	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily. This subfamily includes cyclohexadienyl dehydratase PheC. These proteins catalyze the decarboxylation of prephenate to phenylpyruvate in the alternative phenylalanine biosynthesis pathway in some proteobacteria and archaea. The PheC proteins belong to the PBPII superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. Since they the PheC proteins are so similar to periplasmic binding proteins, (PBP), it is evolutionarily plausible that several pre-existing PBP proteins might have been recruited to perform the enzymatic function.	4.487e-125
NZ_CP015726.1\|WP_063730782.1\|8239109_8240321_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	4.49905e-69
NZ_CP015726.1\|WP_063730775.1\|8247998_8249018_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.40826e-143
NZ_CP015726.1\|WP_063730787.1\|8232008_8232434_+\|ribonuclease	gnl\|CDD\|238340	cd00607, RNase_Sa, RNase_Sa. Ribonucleases first isolated from Streptomyces aureofaciens. In general, ribonucleases cleave phosphodiester bonds in RNA and are essential for both non-specific RNA degradation and for numerous forms of RNA processing. RNAse Sa is a guanylate specific endoribonuclease which belongs to the superfamily of microbial ribonucleases. Typical of this sub-family, the enzyme hydrolyses the phosphodiester bonds of RNA at the 3' oxygen end of guanosine residues to yield oligonucleotides with the guanosine-2',3'-cyclophosphate at the 3' end and the hydroxyl group at the 5' end. The terminal guanosine-2,3'-cyclophosphate is hydrolysed by guanyl RNAses to give guanosine-3'-phosphate.	1.94832e-46
NZ_CP015726.1\|WP_063730781.1\|8240381_8240759_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133388	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily. Putative helix-turn-helix (HTH) MerR-like transcription regulators (subgroup 3). Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.20585e-43
NZ_CP015726.1\|WP_079152015.1\|8244364_8246110_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173874	cd08509, PBP2_TmCBP_oligosaccharides_like, The substrate binding domain of a cellulose-binding protein from Thermotoga maritima contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of a cellulose-binding protein from the hyperthermophilic bacterium Thermotoga maritima (TmCBP) and its closest related proteins. TmCBP binds a variety of lengths of beta-1,4-linked glucose oligomers, ranging from two sugar rings (cellobiose) to five (cellopentose). TmCBP is structurally homologous to domains I and III of the ATP-binding cassette (ABC)-type oligopeptide-binding proteins and thus belongs to the type 2 periplasmic binding fold protein (PBP2) superfamily. The type 2 periplasmic binding proteins are soluble ligand-binding components of ABC or tripartite ATP-independent transporters and chemotaxis systems. Members of the PBP2 superfamily function in uptake of a variety of metabolites in bacteria such as amino acids, carbohydrate, ions, and polyamines. Ligands are then transported across the cytoplasmic membrane energized by ATP hydrolysis or electrochemical ion gradient. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.18185e-127
NZ_CP015726.1\|WP_063730788.1\|8231183_8231840_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.15032e-20
NZ_CP015726.1\|WP_063730791.1\|8228615_8229089_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	4.83667e-22
NZ_CP015726.1\|WP_063730779.1\|8242114_8244073_-\|cellulase-family-glycosylhydrolase	gnl\|CDD\|226444	COG3934, COG3934, Endo-beta-mannanase [Carbohydrate transport and metabolism].	1.82695e-22

>NZ_CP015726.1|WP_159073561.1|8235539_8236052_+|hypothetical-protein
MRQKRKLAIAMAVAALATAVGTSAAATEPQPDQNNTTQTAPTGHEGHEGRDGRSGHEKSNACTDVDSAGNEGVITAGVGAKYISTVCNGHVYVLSIDESTNPGTPVGGWVAVGGPRDVLEATLASNTDDVQGGPLFVTVLTRSQEVWEGRCPNTRPVGTCVFTQLPDPPH
>NZ_CP015726.1|WP_063730785.1|8234598_8235447_+|transporter-substrate-binding-domain-containing-protein
MRRAVTLATVAAVLAATAAGSALADGTAAKRTADSAANSAAVHGTLLDRVPRRGVLRVCTTGDYRPFSHRDAKTGAYTGIDISMAGNLAKSLDAKPKFVATTWAKLVDDLAAGRCDIGMGGVSVTLERARKAAFSEPYLTDGKTPIVRCEDEKKYQTLDDIDRPGVRVVVNPGGTNEAFARAHIKRATLTVHPDNTTIFDEIIDGRADVMMTDASETRYQSKIHPELCAVHPDKPFSFSEKAYALPRADAQFKSYVDQWVHLATHDGTYRKYADEWLARPVE
>NZ_CP015726.1|WP_063730786.1|8233799_8234453_+|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase
MYRWEITRAALAQRVLAIVRSDSYDHATATADTLLSAGITSLEISLTTPFALEAVTTLIREVGDDAVIGAGTVLDGASARMAVDAGARFLVSPSLDPDVIRTGHRYGLPVFPGVSTPTEAVRAMELGADALKLFPAAAYGPRWVKDVRAALPQAAFVPTGGVTVADAPDWIAAGAVACGMASALSEGDRDTVAKRASELLARLEEAGPPLDPGPERY
>NZ_CP015726.1|WP_079152016.1|8232651_8233617_+|sugar-kinase
MANGPEVVTCGEAMLLLLAEPGIPLDRAVHFRRSVAGAESNVAAGLSRLGHAVRWLGRVGADPAGEAVLRELRADGVDVSQAVVDEHAPTGLLLRDSHPHRSIDVQYYRMGSAASRLTPDEIGPDALSGARMLHISGITPMLSPTAAAASRRLVELAREAGAKVSFDPNVRRKLGGAAQWAQTAGPLLREADLVLAGEDELELLTTQSADEAARELLDGGTQEVVIKRADHSATVVTADGRWQQSPHAVPLVDPIGAGDGFAAGYLSARLRGLSEPRALAEAACVASLVVQASSDTDGLPSAVARDRALAELVTGSDGVHR
>NZ_CP015726.1|WP_063730787.1|8232008_8232434_+|ribonuclease
MKIPPRMIRIGALGALAASLFIGGTAVTATATPAAPAAAVSVRAVADVGDICYSKLPSQAHDTLDLIEKGGPYPFPQDDTVFQNREGILPAQSSGYYHEYTVITPGSDDRGARRIVTGDKKDEDYYTADHYESFDLVDRGC
>NZ_CP015726.1|WP_063730788.1|8231183_8231840_-|helix-turn-helix-transcriptional-regulator
MNPFPEGDPAEPPAEPSAELPTVAPRLRDLRRGSGLTLEAAAHRVGLSPAHLSRLETGRRQPSLPMLLALARTYGTTVSDLLGEVPPSQDPIVRADRMEAQEAGGWTYRRAGGSGRAMQALRLHVPEGSGAQDELVRVHAGEEWLYVINGRLRLALGDAVHVLGPGDAAHFDSLTPHRIAAASPGGTDLLFVHTLLQSGAAELCLGDTARRGGRPGTP
>NZ_CP015726.1|WP_154685920.1|8231010_8231187_-|hypothetical-protein
MNDATPTPNPHPDPAAPRVTREQDRAPIPVSVRVFIYVVGVHVFAGFLYLLFYLGASK
>NZ_CP015726.1|WP_079152036.1|8230092_8230923_-|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme
MDVRPLFPVERGALLDLLAGLGPDDWRRPTACPGWDVHDVAGHLLHGHIRRLSGGRDGHPGPPFGPGETLPAYITRTNEEFVRGTTRQLSPRLLTDLLATLGPQLDDYWARCDPDAPAGFDVSWAAPGVQAPNWLDTAREYTEFWVHQQQLRDAVGRPGAAGPELLHPVLDTFLRALPHTLRDHPAPDGASLRIRVPGPAGGRWTAVRAENHWRLGTTDAPPTAEVGIDADALWRLATRGITPEAARSRATIHGDERLAGAALTLLAIVREPDEPA
>NZ_CP015726.1|WP_063730790.1|8229183_8230044_-|hypothetical-protein
MEDRAASTARRMWTLFEPIHAVAYFAPEALAVYEDAGLRGFWRGYFACRAAPLGPVGPEPVAAAFFSFAPAMVARALPDVWQLTAPERALEIRRAGAVSALRRLLTGHEPEAERAAEALVPRAAGLDTAGRVLAAAHASLDFPDQPLDRLWHAATLLREHRGDGHVAALVAAGLDGCEALALRAGTDIPRSELQPYRGWTDQEWEAARLHLTERGLLLPDGTTSRNGRELLRAVESATDRAAERPWRALAPDAVQDLTARLTPVSRACAAALRFPNPIGLPEPSGR
>NZ_CP015726.1|WP_063730791.1|8228615_8229089_-|carboxymuconolactone-decarboxylase-family-protein
MEARLNLFGTPSAAKFLKAINSAGQVFSDSTLPTTTQELVKLRASQINGCGFCTDMHTKEAAHAGETSVRLHLVAAWREATVFTDAERAALELTEQGTRIADAAGGVTDEAWANAAKHYDEDQLAALVSLIALINAYNRLNVIVQQPAGDYRVGQFG
>NZ_CP015726.1|WP_063730783.1|8238585_8238960_+|hypothetical-protein
MATQVTATANAQRGSSFLRIAIALQTLTIFLQAVSAGLLLTASYGETLHSVGARVMYGASMLYVLAAVLAWKPGGGSPRPVRHASGFLALASVQVVLGIAHVPSVHLPLGVLMFGLSVLALARR
>NZ_CP015726.1|WP_063730782.1|8239109_8240321_-|MFS-transporter
MTQKLPLPALLALATAVFLTSLTETLPAGVLPAMSGDLGVGESAMGQSVTIYALGTALTAIPLSAATAGWRRKRLLLTAMAGFAVGNTVTAASSDYTLTMVARFVAGVAAGLAWALLAGYARRMAPVPLQGKAIAIVMTGIPVALSLGVPAGTFLGQALGWRVTFSVMTALAVALIAWIVALVPDYPGQRPEGRTSVRRTLTVPGVAPVLFVTLAFVLAHTILYTYIATFLGEVGMGGSTDLVLLVFGAASLASIWIVGVHIDRRLRALTLAATVLFAVAATALAAVSASPALVYAAVTLWGLGWGGAPTLLQTAVADAGGEAADAAQAMLVTLWNAAMAGGGLAGGLLLDLLGPASFPWSVLALLGPVLIVVAAARVHGFPAARIDGAGADGELPVRERERR
>NZ_CP015726.1|WP_063730781.1|8240381_8240759_+|MerR-family-transcriptional-regulator
MRIGELSERTGTSRRLLRYYEEQGLILPIRCANGYRAYDERNVDRVLQIRGLLDAGLPTRIIKQILPCLDKPRVIHFSDATPEMLATLEHERDRMTERIAFLVRNRDAIAEYLAVVRDNDSPKGA
>NZ_CP015726.1|WP_063730780.1|8240792_8242010_-|MFS-transporter
MSTAIASADRTAEPQNRSPLRDWLAVISVMMGIFSIVTTEILPIGLLTSIGSDFTISDGMAGLVMTMPGLLAAVSAPLVTVATARCERRLMLCAFMLVLALANFLAAVAPAYWLMLVSRVMVGVTIGGFWSIGAGLAGRLVPPASVGRATSVIFAAVPLGSVLGVPVGTYIGDIAGWRTACAVMGVLTVGVLVAMMLVLPPLPVTQATRLDGLRTMTRNVNTRYALLATFLIVMAHFGAYTYVTPFLEQVTQVSPGLITVFLLTYGAAGIVGNFAGGSAVTRHPRATFGITAAMISSATLLLPVLGRWDIGAVTLLMVWGAAYGAVPVCTQTWFAKAAPHLPEAASVLFTASFQLTLSLGALAGGVIVDHTSPATVMTLGGATAALVVLTVSVHRAKRLTWTEGA
>NZ_CP015726.1|WP_063730779.1|8242114_8244073_-|cellulase-family-glycosylhydrolase
MQRPSARLSLHDRPVTWLGANFWSRTGGPLMWRAYDGEVIDAELRVLRDHGLSMTRSFFYWPDFMPAPDRLDPDMCARYADFLDRHHALGMTTVPTFLVGHMSGENWDPSWRGDRDLYGDVWLVARQAWFARETVRRFAAHPAVAGWLVSNEMPIYGREPGTSAPPAPRETVAAWAQLVVDAVRAGGGTQPVSLGDGAWGLENTGHDNGFRLRDTADLCDFLGPHVYRMEDDPVRQHYAAAWVCELTGTFRRPVILEEFGVSSDFASGPGAARYYRQTLHNSLLAGATGWIAWNNSDYDGLRGQDPYRHHAFEMHFGLTTSEGTPKPQLLELKAFARVLDEVDFPRCHRAPTDTALLVSSYLDTPYPFTRAEDRSYVQQTCRQAWVAARLADTPAAVVRESDGPLPSGVALWLVPSTKQLLSPTWYALEQRARDGATVYVSYSPGAHDEQRGPWYAHLNELFGVRHQLDYGLLNPIEDDEITLTLTRPFGTLPEGARLTFAAAGARAFLPVEPDGAEVLAVDGHGRPALLLRAVGRGSVVFCTYPVEHMAAVTPRVNPESTATLYDALATHAGVHRPVTVGDPRVAVDRLAHADGRTFIWLVSQAPDELTVKPSVTGGAQLRDLTGDPADTVTLPPYGVRVLRLDAPRAAGR
>NZ_CP015726.1|WP_079152015.1|8244364_8246110_+|ABC-transporter-substrate-binding-protein
MCWHTGCGHTEGDTMMLMSTGRPRRAIAAAAALALSGTLAACGGGGSGGGGAGGVLTVSAGAGGNFVRNFNPYAPQPLQATNGMIYEPLFHFNAARTGEVDPWLATKYTWADGGKSIRIQLRTNVTWNDGKPFTAEDVAYTFRMTKDNKALNMYALPVASATAEGKHTVVVTFTKSAYTKEYFLLGKIKMLPQHIWSKLSAKEKATTLNPNPVGTGPWKVKSVKGTTLDLVARKDYYIKGLPHFKLMRYRAFTGNNAANAAVTSGQIDWAGGFIPDIKKNYLAKNKKFDLVNIPLATTSFVPNAQRGPTADVNVRKAISAALDRDFMNKSVYDGQAPAANPMALLLPNYQSVLDPSLKDATMETGQDKVDGHLTDSGYAKGSDGMWRKDGKKLSVSVELVSGWTDYVSVAQMAKEQLKKAGIDLVVKAESYSQWSNNRARGQFQMLLDNAGYTPDPRAYYAQMLDSTIPPKIGETTNVGNFGRYANAAIDKALDKIGETTDLAKQKPWYYKIQQEFIKDMPLIPLFSAQNEQEFNGNRVTGYPTEDNLYAAPSIWLDPDGGWVAARIKPAAGKGADKAAGK
>NZ_CP015726.1|WP_063730777.1|8246131_8247115_+|ABC-transporter-permease
MRYLLRKLGFYAIAAWMAITVNFFLPRLIPGDPVEMMLARQAQSGPVEPGQEEALAAMLGLGHGNLLVQYGDYLHALARLDFGLSVTYFPSPVTDVVGDAVPWTLVLVGAATLLSVALGLTLGTLAGWRRGSWFDSLVPSTTFLAAIPYFWLALLLLYLFSQVWGVLPLGGGYDETLDIGLSGAFLGSAAEHAVLPAATIVLSSVGGWMLGMRNMMVSTLAEDYVVAAEAKGLPPRTIMVGYAARNAVLPSVAGFAISLGFIVSGSLVMEIVFSYPGMGFTLLQAVQNTDYPLMQAVFLVITFGVLAANFLVDLVYGFVDPRTRQAR
>NZ_CP015726.1|WP_063730776.1|8247111_8248002_+|ABC-transporter-permease
MTAPTVPTTTPRATGRGWLRPALRSRRFAAGLALLAVFVLTAALGPWLVGDPNAFTTDLGQAPSAAHWLGTTQTGQDVLAQLVVSARGTLLIGAASALIATVVSVVAGIGGGFLGGLADEALSLISNVFLVIPGLPLVIVVSAYVKGGGAWSTILVIALTSWAASARVLRAQTLSLRSRDYVLAARVYGEKRWRIVLVEILPNELAIIVSQFIFAVIFAILTQAGLAFLGLADPSHLTWGTMLYFAQNAEALTSGAWWWFIPPGLCIAALGTALSLISFGLDEVLDPRLRVRKVSA
>NZ_CP015726.1|WP_063730775.1|8247998_8249018_+|ABC-transporter-ATP-binding-protein
MTDDTDDVVLRAEHISVTYEGERPTHAVRDVGFELRRGELLGIAGESGCGKSTLAYAVARMLGPPARLTGGRVLYRDRTGAETDLLALEGDALRAFRWSRLSVVFQSAMNALNPVTTVGRQFDDIFRAHRPRMRRPERYERARALLDMVGIDPARVRAYPHELSGGMRQRVVIAMALALEPEIVIMDEPTTALDVVVQREILDEVQRLRDDLGFSVVFITHDLSLLLEISDRLAVMYAGSIVEYGPAERIAADPAHPYTQGLLRSFPDLAGERRALRGIPGSPPDLRDALPGCPFAARCEHAFEPCGTETPTLVPLAPGTSAACHLHAVAGLLPEGRQP
>NZ_CP015726.1|WP_009714239.1|8250125_8250845_+|GntR-family-transcriptional-regulator
MDRSSPVPLYFQLSQQLESAIEKGRLAPGSLLGNEIELAGRLGLSRPTVRQAIQSLVDKGLLVRRRGVGTQVVHSQVKRPLELSSLYDDLEAAGQRPATRVLLNTTEPATAEVAAALGIAEGTEVVVIERLRLAHGEPMAHLSNRLPAGLLKLDSAELEDTGLYRLMRAAGITLHSARQAVGARAATADEGKQLGEPEGAPLLTMERTTFDDTGRAVEFGSHTYRASRYAFEFQLLVRP

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Crispr_ID: NZ_CP015726_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_12

8685078-8685216

Orphan

Consensus_repeat	Method
GGGTGCCGGGTGGGGGTGGGCGCGGCCCCGGCTCCCTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_12

>merge|NZ_CP015726|12|8685078-8685216|CRISPRCasFinder
GGGTGCCGGGTGGGGGTGGGCGCGGCCCCGGCTCCCTCCCGTGGAGTCGCGAACCACTGGCCGGTGGCCTCGGCTCTGGAGCGGTTGCGGTTTGTGTCGGGGTGGCGGGTGGGGGTGGGCGCGGCCCCGGCTCCCTCCC

>NZ_CP015726|12|11|8685078-8685216|CRISPRCasFinder
GGGTGCCGGGTGGGGGTGGGCGCGGCCCCGGCTCCCTCCC	GTGGAGTCGCGAACCACTGGCCGGTGGCCTCGGCTCTGGAGCGGTTGCGGTTTGTGTCG
GGGTGGCGGGTGGGGGTGGGCGCGGCCCCGGCTCCCTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063729138.1\|8691928_8692501_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP015726.1\|WP_063729137.1\|8692433_8693048_-\|isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235156
NZ_CP015726.1\|WP_079151847.1\|8680383_8681715_+\|carboxypeptidase	unknown	unknown	gnl\|CDD\|349461
NZ_CP015726.1\|WP_063729134.1\|8695381_8697298_+\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376450
NZ_CP015726.1\|WP_063729140.1\|8689980_8690844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063729143.1\|8681814_8683620_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP015726.1\|WP_079151864.1\|8671936_8675662_+\|DUF4981-domain-containing-protein	unknown	unknown	gnl\|CDD\|236548
NZ_CP015726.1\|WP_063729139.1\|8690924_8691683_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|119339
NZ_CP015726.1\|WP_063729242.1\|8670943_8671696_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133405
NZ_CP015726.1\|WP_079151863.1\|8678343_8680299_+\|Xaa-Pro-dipeptidyl-peptidase	unknown	unknown	gnl\|CDD\|235435
NZ_CP015726.1\|WP_063729146.1\|8675741_8676614_+\|DUF2236-domain-containing-protein	unknown	unknown	gnl\|CDD\|378343
NZ_CP015726.1\|WP_063729141.1\|8685264_8686902_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP015726.1\|WP_107450970.1\|8670071_8670932_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP015726.1\|WP_063729132.1\|8698019_8699093_+\|iron-containing-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|341453
NZ_CP015726.1\|WP_063729149.1\|8665569_8666784_+\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|236197
NZ_CP015726.1\|WP_063729135.1\|8694124_8695111_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|187558
NZ_CP015726.1\|WP_063729148.1\|8667775_8669968_+\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236864
NZ_CP015726.1\|WP_063729133.1\|8697294_8698032_+\|phosphocholine-cytidylyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133014
NZ_CP015726.1\|WP_063729240.1\|8687135_8689529_-\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP015726.1\|WP_063729145.1\|8676644_8678129_-\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341066

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063729138.1\|8691928_8692501_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	4.25171e-16
NZ_CP015726.1\|WP_063729137.1\|8692433_8693048_-\|isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235156	PRK03759, PRK03759, isopentenyl-diphosphate Delta-isomerase.	3.62061e-84
NZ_CP015726.1\|WP_079151847.1\|8680383_8681715_+\|carboxypeptidase	gnl\|CDD\|349461	cd06242, M14-like, Peptidase M14-like domain; uncharacterized subgroup. Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.	2.96159e-72
NZ_CP015726.1\|WP_063729134.1\|8695381_8697298_+\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|376450	pfam01066, CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase. All of these members have the ability to catalyze the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond.	1.46055e-10
NZ_CP015726.1\|WP_063729143.1\|8681814_8683620_+\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	0
NZ_CP015726.1\|WP_079151864.1\|8671936_8675662_+\|DUF4981-domain-containing-protein	gnl\|CDD\|236548	PRK09525, lacZ, beta-galactosidase.	1.74349e-165
NZ_CP015726.1\|WP_063729139.1\|8690924_8691683_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|119339	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.	1.06626e-61
NZ_CP015726.1\|WP_063729242.1\|8670943_8671696_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133405	cd04778, HTH_MerR-like_sg2, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily. Putative helix-turn-helix (HTH) MerR-like transcription regulators (subgroup 2). Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.33924e-17
NZ_CP015726.1\|WP_079151863.1\|8678343_8680299_+\|Xaa-Pro-dipeptidyl-peptidase	gnl\|CDD\|235435	PRK05371, PRK05371, x-prolyl-dipeptidyl aminopeptidase; Provisional.	0
NZ_CP015726.1\|WP_063729146.1\|8675741_8676614_+\|DUF2236-domain-containing-protein	gnl\|CDD\|378343	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236). This domain, found in various hypothetical bacterial proteins, has no known function. This family contains a highly conserved arginine and histidine that may be active site residues for an as yet unknown catalytic activity.	1.2771e-55
NZ_CP015726.1\|WP_063729141.1\|8685264_8686902_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.30195e-135
NZ_CP015726.1\|WP_107450970.1\|8670071_8670932_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.02332e-12
NZ_CP015726.1\|WP_063729132.1\|8698019_8699093_+\|iron-containing-alcohol-dehydrogenase-family-protein	gnl\|CDD\|341453	cd08174, G1PDH-like, Glycerol-1-phosphate dehydrogenase-like. These glycerol-1-phosphate dehydrogenase-like proteins have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH) which plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion.	7.23827e-142
NZ_CP015726.1\|WP_063729149.1\|8665569_8666784_+\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|236197	PRK08242, PRK08242, acetyl-CoA C-acetyltransferase.	0
NZ_CP015726.1\|WP_063729135.1\|8694124_8695111_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	8.0788e-133
NZ_CP015726.1\|WP_063729148.1\|8667775_8669968_+\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|236864	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ.	2.15575e-158
NZ_CP015726.1\|WP_063729133.1\|8697294_8698032_+\|phosphocholine-cytidylyltransferase-family-protein	gnl\|CDD\|133014	cd02523, PC_cytidylyltransferase, Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP-Cho to either lipoteichoic acid or lipopolysaccharide.	2.82353e-63
NZ_CP015726.1\|WP_063729240.1\|8687135_8689529_-\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP015726.1\|WP_063729145.1\|8676644_8678129_-\|M1-family-metallopeptidase	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	1.76543e-162

>NZ_CP015726.1|WP_063729143.1|8681814_8683620_+|BCCT-family-transporter
MTETQKDTGDVRNDPPVTADLPGSPDPTPAPRTDRVVFGVSAGLTLAFVVWGAVFTGALESVSDSMLSGLIHNGGWAFILAATGFVIFALWLAMSRYGKITLGKEGEEPEFKTVSWVAMMFSAGMGIGLMFYGVSEPLAHFVTPPPGTDPGTAAEKMQIAMSTTLFHWTLHPWAIYAVVGLAIAYSTFRRGRRQTISAVFTPLIGSRHANGAGGRVIDILAIFATLFGSAASLGLGALQIGSGIEVLGWKSNVGTGLLVAVIAVLTVAFIASAVSGVAKGIQWLSNINMVLALFLAVFVFVAGPTIIILDLLPTSIGSYIGDLPQLVGRTEATGGDTVATWLSDWTVFYWAWWISWTPFVGMFIARISRGRTIRQFVGGVILVPSTVSLIWFAIFGGSSMKLQAAGKLGKETTPEGQLFGVLEQYPMASVMSVIVMILVGIFFVSGADAASIVMGTLSQRGSFEPSRFVVIFWGVVTGAVAAVMLLVGGGGDDALTGLQNLTILVAAPFTLVMVGLCWALLKDLRRDPLIVRGERGEEAVEMAVIAGHEKYDGDFEIRIGPAAPAENIDGAAGTGEAESSTADTAKSDADEDRVSTGETTR
>NZ_CP015726.1|WP_079151847.1|8680383_8681715_+|carboxypeptidase
MFSPAPLIRTAVTCGALGALLTGSLLAAPARAEPGAPPRTGFETSKGARWTTQAEEADFLAAVDKASARVAVDTLGATAQGRPLNLVRIGAPAAPADAARAARGNSLMLICSQHGDEPSGREACLTTIRDLAYAKDPGTRRFLERTNVLVVPTANPDGRAADTRGNSEGTDINRDHLALTTAESRAMARVIRDWRPDTVYDLHEYGATVPYYMKDLLALWPRNLNTSTPVHREARTLSDAYVRPHAEAAGFSTGVYGIWTDPETGEPVKQVAGDGQERILRNTAGVKNSVGQLVETRVDPLTDAEKADPAVNNKRRVGSQLAALDGAFDFVRERRPRIEAATTAARLSGYADRGPVYLGGADNEPAEEGEVLQDPPCGYQLDAAQYDGIRDELALHGIRTRALRGAGHDVLVPLRQPLRALVPLLLDGRAAYHLTAGQSVNTC
>NZ_CP015726.1|WP_079151863.1|8678343_8680299_+|Xaa-Pro-dipeptidyl-peptidase
MHWARHFVPAVTALVAATLLPLSPLGTSPAHAATVRESRPVYSYDDAIRESVWVDTKLDGDADGRTDRVAVDIVRPREAARQGRKVPVIMDASPYYSCCGRGNESQTKTYDANGKPVLFPLFYDNYFVPRGYATVLVDLAGTNRSDGCVDVGGRSDIQSAKAVVDWLNGRATGYSAAAGGKPVKASWSNGRTGMIGKSYDGTIANGVAATGVKGLKTIVPIGAISSWYDYYFAKGAALFGSGPDGLAHTVESDAARGRCAAVQKRLVDGAPRSGDWTGLWSARDYVPDARKVRASVFAVHGMQDLNVRTKHLGQWWNALADAGVERKIWLSQAGHVDPFDFRRGTWVKTLHRWFDHYLLGIDNGIERTPMADIERAPDQWSTDRVWPPSGTRQTTLRPAPGTTPGVGVLGTERARPGATAAFTDDPRLSESDWAADIDRPTAAKAGFSTPPLTEDLRLSGSGTVTVTATPSTSSAHLSAVLVDLGPDTIRDYGGAGEGIVTLDDRTCWGSSTAGDSACFKVTAADTEAVEQTVFSRGWADLGHHADARKGRPLTPGKPYTITLDLAATDHVVPAGHRLGLIIAGTDAGLLEPPTTTPRLTLDLNRTSARLPLAGSLRTEGAAPGAAPSPSPSSERLRGIRTPHIESPLPLR
>NZ_CP015726.1|WP_063729145.1|8676644_8678129_-|M1-family-metallopeptidase
MRHHRLIVPSAAAACLLLAIPASAAEPSPGAPGIGDSYYPSYGNGGYDVSHYDLRLKYQPKTDGLEGTATIVAKATQDLSRFNLDFALDVREVLVGGKKAAFTRTGDHELEITPSAALDSGRPFTVVVRYSGTPSKVEAGGFTGWQRTPDGGVAANEPESAWWWFPSNDHPLDKATYDVSVAVPDGTQAISNGVLTSNSSQLGWTRYNWRSSKPQATYLATLAVGKFDITTDTTANGLPVLNAYSKDLGENAGAARASIERTAEIADWESTVFGPYPFDALGGYVPNVSAGFALETQTRPFYGPKKFAKGSNVSVVVHELAHQWFGDSVSVKDWRDIWINEGFASYAQWLWSEKEGEGTAQELADYTYDSYPADDPFWKVEPGDPGAENQFHDAVYDRGALALQALRNRVGDKDFFAILKGWTKKNRYGNASVKDFVAYAEKVSGEPLAALFDTWLFTPSKPAATQARAAELSPAKAPVRPKSWQKIQAAHSER
>NZ_CP015726.1|WP_063729146.1|8675741_8676614_+|DUF2236-domain-containing-protein
MSTTHQTPPEPPPVGGILWFIAGDIRSVLALPAATAMQVAHPGVGAGVDQHSAFRTDPWGRGERSLQSVQLWVYGGERAAREGRRLRTAHEPIRGVDAHGRPYHALDPALYAWVHATAFPAYLHAQRYLGRRPFTGAEERQLYAELLRVGRVLGLEDRDMPRTVEEFWPYYRRVLREELEETAVVRELLAADAPLPPPAAPLPRAAWPLLRPLFNRFRAFLTAGLMPPDAREAIGLPWTAARERRLRRFGLAVRVVVPLLPERWRYLPIAREARRAARRRAPWNTGRRTP
>NZ_CP015726.1|WP_079151864.1|8671936_8675662_+|DUF4981-domain-containing-protein
MAAAMATALGAALTTADSAAGRAPDAGKFPADVHSYLEDPEKTGEGQEPPHTRLKPTGPDAEKWQRSLDGSWRFALADKPEDAPAGFWKEDYDASSSQGFRRVKVPHTWQTDDLDHPIFRNIDGEIVPEKPPKVPRDVNPTGAYLKDVQVPKSWDGRRQVLRFDGMTSAAFVWVNGRYVGYDQGGYIPAEFDVTDYLRPGHNRVAVQVHRWSAGSYLEDYDQWRFAGIFRSVSLYSTPKTRMEDAYVTTDLDTDYRDATLRTEVDIARAEGGTKGKQRVTGVLYDPRGREVRRLSAEEADGKAELTAQVKNPAKWSDETPDLYQLELTLRDADGKATQTVRQSVGFREVEVKDKQLKLNGKRILIRGVNRAETDPATGRYATRERMEQDVRLMKRLNVNAIRTSHYPSDPYLYELADREGILIDDEMEVETHSFENCPDDCLAEKPEWQKAFLERHQGMVERDKNHPSVIMWDTGNEAGLGKAHYAMAEWTKKNEPTRPLYHQPNRPDGDAPFADIAGPRYPTPASLESKAKTFTKPIVMGEYAHAMGNSLGNFREFWEVMRKYPGAQGGFIWDWAEQNIKRPLITTPDSSGNRVAASLSGKPEVVDGNNGKHDKALYLSGLDDFVETYRDPKLDLTGKAVTLDAQVKPAEPFTGDFTMVSKGDQYVLRMKDADTLEFTITSEGKPRTVTADVPQGWTGAWHRVTGTYDGSALRLYVDGKQLAETAWSGPLDYTGYDLGVGRNADTMEDGYPGRTAKGTIDQVRVYDTALGAARLAAGADPKRDALIALDFDSFQRKGDYLSYGLYESGVDGLVTADRKPEPETAQLAWVQSPIRITDADARGGKVKITNERVFTGTSDLKLRWKVTEGAKTVASGTRALNVGPDTSEEVQLPAPPANPDGYERYLTVQAVTAHDANWAKAGHVVSFGQFAVGGDKVPEPESSRGGDGKATVADQGDTVEVIGSGFRYTFDKKKGTLTSMRAGSRELLTGGPELDAWRAPISNERSDWGTAEGKQWRSLGLDRLRATVKGVDVTPGDDGTVSVAFTTTVAPPGATNASFDQTMTYRVDGSGTMRVQHKVEARGEFRKLSYLPRVGMKLKVPERYDTFRWYGRGPVENYNDRKDGAPMGVWSSSVEDQYTEYLKPQDHGNHDDVRWASLTDGRGGPGLLVSGDLEAGATAYDDLDRAAYPHLLKRNDGWNTLHADHAVTGVGDTPNPVRDQYRVKADKAYDYTLTLRPLSAD
>NZ_CP015726.1|WP_063729242.1|8670943_8671696_-|MerR-family-transcriptional-regulator
MTTPDSEGPTSEELTLTVDELAARAGVTVRTIRFYGTRGLLPPPAIGPRRVGHYGPVHLSRLALIEELQHHGMTLSAIERYLRQLPADLSADDLAIHRALVASWAPEAPEEATREQLARRAGRALSDEDVDRLAALHALERTDRPDVFRVDPGVLHLGLRLLDVPIDLETILAAHTVVLEHSRSVARELGRLFRDEVWGPEREPESGGGAERAAAKKSLSADMQPLVVQALVIAFQRSMKQELRAWYGTD
>NZ_CP015726.1|WP_107450970.1|8670071_8670932_+|alpha/beta-fold-hydrolase
MSNMRNEHPTGTVFVLVHGAWHSSWQWAPTQRALAGLGALSLAVDLPGHGFDAPTPSGYYAPGQPGLATEKSALAGLTLEECAGAVVSALRSVRGHRKVVLVSHSAGGVSASLAAEQAPELVDELVHLSSVVPAGRPRFADYMEAPEQAATTRGQGLMVGDPEAIGAFRINPLSADPEYVEELRQGYYHDVPAGSFGRWRHALSPDLPFAIPTTPVTLTRERWGRIPRTFIRCAEDWALTPAVQDLMIAEADAAMPDQPFTVRTLPGSHSPFAARPADLAAALVRT
>NZ_CP015726.1|WP_063729148.1|8667775_8669968_+|3-hydroxyacyl-CoA-dehydrogenase
MSNPATASTIRWEQGDDGVVTLVLDDPGQSANTMNAAFIASLDAVADRLEAEQEAIRGVIVTSAKKTFFAGGDLKDMVTLGPDQAQQAFETNLRIKRGLRRIETLGKPVVAAINGAALGGGFEIALACHHRVALDTPASRIGFPEVTLGLLPGSGGVVRSVRLLGVADALLKVLLQGTRYAPRRALEAGLVHEVVDTPDEMLARARAFIDAHPESRQPWDEKGYKIPGGTPADPKFAVNLPAFPANLRKQLNGAPYPAPRNILAAAVEGSQVDFETAQTIEARYFTELVVGQTAKNMIQAFFFDLQAVNSGANRPQGIEPRTVRKVAVLGAGMMGAGIAYACAKAGIEVVLKDVSDEAAAKGKAYAEGLLAKAVAKGRTTEARRDALLALITPTADPQDLAGCDAVIEAVFEDPALKHKVFQEIEPIVAPDALLCSNTSTLPITMLAEGVERAGDFIGLHFFSPVDKMPLVEIIKGERTGEEALARAFDLVRQISKTPIVVSDSRGFFTSRVIGHFINEGVAMVGEGIDPASVEQAAAQAGYPAKVLSLMDELTLTLPRRIREETRRATLEAGGEWRPHPADTVIDRMVEEFGRPGRSGGAGFYEYDAATGKRLGLWPGLREHFGTGTTPDNSIPFEDMKERMLFREALDTVRLLEEGVLTSVADANIGSILGIGFPGWTGGVLQYINGYEGGVAGFVARARELEAAYGERFAPSQLLLEKAERGERFTD
>NZ_CP015726.1|WP_063729149.1|8665569_8666784_+|acetyl-CoA-C-acetyltransferase
MSTEAYVYDAIRTPRGRGKADGALHGTKPVDLVVGLIHEIRRRFPDLDPAAIDDVVLGVVSPLGDQGSDIAKVAAIAAGLPVTVAGVQENRFCASGLEAVNLAAAKVRSGWEDLVLAGGVESMSRVKMGSDGGAWFADPMTNYETGFVPQGIGADLIATLGGYTRHDVDTFAALSQERATLAWKEGRFDRSVVPVRDRSGLTVLDRDEHIRPGTTPETLAGLKPSFATIGEAGGFDAVALQKYHWVEAIDHVHHAGNSSGIVDGAALVAIGNRETGDRYGLTPRARIVSAAVSGADPTIMLTGPAPASRKALAKAGLTIDDIDLVEINEAFAAVVLRFAADMGLDLDKVNVNGGAIAMGHPLGATGAMILGTLVDELERRGQRYGLATLCVGGGMGIATVVERL
>NZ_CP015726.1|WP_063729141.1|8685264_8686902_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MTATLVAKDLAAGHGDRPLFSGLDLVVAPGEVIGLVGVNGAGKSTLLRLLAGLTDAEQGAVRLSPPHATVGHLPQEPERRAGESVRAFLARRTGVAAAQADLDATTQALADGAPGADDAYAVALERWLSLGAADLDERADEVAASLGLDVSLDRPMTALSGGQAARAGLASLLLSRYDVFLLDEPTNDLDLDGLQRLETFVTGLRAGTVLVSHDREFLARTVDKVLELDLAQQQVNVFGGGYTAYLEERETARRHARERYGEYADTRASLEARARTQRAWMEKGVKNARRKAPDGDKVARNARVESTEKQAAKARQTDRLIERLEVVEEPRKEWELRMEIAAAPRSGAVVATLRGAEVRRGDFHFGPVDLQIDWADRIAVTGANGSGKSTLLAALLGRLPLDEGHASLGPGVVVGEVDQARALFFGGEALLDAFGAAVPELAPADVRTLLAKFGLKAAHVLRPASTLSPGERTRAALALLQARGVNLLVLDEPTNHLDLPAIEQLESALASYEGTLLLVTHDRRMLEAVHTTRRFEVADGQVTES
>NZ_CP015726.1|WP_063729240.1|8687135_8689529_-|RNA-binding-transcriptional-accessory-protein
MTTSIEGRIAEELGVRERQVKAAVELLDGGSTVPFIARYRKEATEMLDDAQLRSLEERLRYLRELEERRAAVLESVRSQGKLDEALEAQILAADSKARLEDIYLPFKPKRRTKAQIAREAGLEPLADGLLGDPTVEPTAAAAAFVDAEKGVADPAAALEGARAILTERFGEDADLIGELRERMWERGRVATKVRDGKEEAGAKFADYFDFAEPFTELPSHRVLAMFRGEKEEVLDLTLEPEEPTEDPGPTSYERSIAHRFGITDRGRPADKWLADTVRWAWRTRVLVHLGIDLRLRLRQAAEDEAVRVFAANLRDLLLAAPAGTRATMGLDPGFRTGVKVAVVDATGKVAATDTIYPHVPRNQWKESLDRLAKLAREHDVDLIAIGNGTASRETDKLAGDLCANHPELKLTKVMVSEAGASVYSASAFASQELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDLSEVKLSRSLDAVVEDCVNGVGVDVNTASAPLLSRVSGIGAGLAENIVAHRDTNGPFRSRKALKDVARLGPKAYEQCAGFLRIRGGDDPLDASSVHPEAYPVVRRMVASAGGDVATLIGNTATLRSLRADDFVDDAFGLPTVTDILKELEKPGRDPRPAFKTATFKEGVEKIGDLASGMILEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSKTFVKDPRDVVKPGDIVRVKVLDVDIPRKRISLTLRLDDEAAGGGGGRSSEQGGGGRRSAPKQRQGGGGRGGGGGGGSRGGQRGGGGGRDAAPANGAMADALRRAGLVDPKRR
>NZ_CP015726.1|WP_063729140.1|8689980_8690844_-|hypothetical-protein
MTTLPERAVRRCHSVVNPLHSTVYFAPDYANELAALGLEERGAVYFVGRAAAFGRVGAGTVTATFYNFKHDLVARHIPRAWDVVSPEDALAARLRAADSVLRRLLGDDALASKELAETAELALRATEACSRSARPLYAAHADLPVPETPHLALWHAATLLREHRGDTHLMALTAAGLDAVEALVSHTATGKGMSPKWLLATRGWTAEELAAGQDRLRTRGLLDEAGELTEAGVALRESVEDETDRLDAAPYEHLGAAGVARLTELAGAFTTRAMEAGAFPADLLSKN
>NZ_CP015726.1|WP_063729139.1|8690924_8691683_-|enoyl-CoA-hydratase/isomerase-family-protein
MEPCLRHDVTDGIATVVIRNPAKRNALTPAMWSALPPLLDRLAADPAVRALVLTGHGDTFCAGADIGSLSATYERSTGLALPAEEALAAFPKPTLAAVRGYCVGGGCQLAAACDLRFAEEGALFGVTPAKLGIVYAPGSTRRLVELIGPAGTKYLLFSGELIGTDRALRTGLVDEVLPTGELDKRVAEFTRVLVSRSQLTQAAAKEFAAGPADAERIAYWQEQARVSGEAGEGIAAFLGRRAPRFGWTPPVA
>NZ_CP015726.1|WP_063729138.1|8691928_8692501_+|ATP-binding-protein
MEIVGRVPSEPGHAPPRGPAVGEGVWRFTAPALESSVPQARHAVRDLLAHQGVSGQGDLVPNLLLIVSELVTNAVRHAALLSPQIGVEVSIGRGWVRVAVEDNHPYRPRPLELEADQGRTGGRGLLLVQAIAEESGGRYDVDHTASGGKAVWAALPLTSAAPVPDGGPLTSLRPPRSAPGSPAGQRPARS
>NZ_CP015726.1|WP_063729137.1|8692433_8693048_-|isopentenyl-diphosphate-Delta-isomerase
MPITPASGPSAETAAASPAPNGSTESIMLELVDEAGTTIGTAEKLAAHLAPGQLHRAFSVFLFDERGRLLLQRRALGKYHSPGVWSNTCCGHPYPGEPPFVAAARRTGEELGIAPALLGEAGTVRYNHPDPASGLVEQEYNHLFVGLLKETPRPDPQEIGETAFVTPDELAKLHAEGPFSAWFMTVLDAARPAIRELTGAAAGW
>NZ_CP015726.1|WP_063729135.1|8694124_8695111_-|UDP-glucose-4-epimerase-GalE
MTWLITGGAGYIGSHVVRAMARAGERVAVLDDISSGIPERLPEDVPLVRGSTLDRALLDRTFAELNITGVVHLAAKKQVGESVEQPLRYYRENVHGLTVLLEAVAAAGIGSFLFSSSAAVYGMPDVELVTEDTPCVPMNPYGETKLAGEWLVRAVGAAHSISTACLRYFNVAGATRPELSDTGVSNIIPMMFERITHGEAPRIFGDDYPTPDGTCIRDYIHVEDLASAHLAVARRLAARPGAGDLTVNIGTGQGVSVREMADLIAEVTGRREPAPVVEPRRPGDPARVVGSTDLIAKELGWSARHDVRAMVESAWEGWCLRHPEARQS
>NZ_CP015726.1|WP_063729134.1|8695381_8697298_+|CDP-alcohol-phosphatidyltransferase-family-protein
MSTAILTGAPVAGSSLQDDLRSLGFDVRPAIDAAGVAKELAAVSPRERVALVDHRFVGHGHALRLALTDPRFPAAAVPGALTAQPEARAALARAVTAAAAAPGAAGQAERAPSPAAAAGSVATVGSAEETAEETGEAGTPSLVDDIAAALDAEGATPHRPELGVLVATVPADEERRAAALAETAAVDEEKVRLRTAVKARDGFFTTFCISPYSRYIARWCARRGLTPNQVTTASLLTALIAAGCAATGTRPGFVAAGVLLIASFVLDCTDGQLARYSLQYSTLGAWLDATFDRAKEYAYYAGLALGAANADGDDVWALALGAMVLQTCRHVVDFSFNEANHDATGNSSPTAALSDRLNSVGWTVWVRRMIVLPIGERWAMIAVLTALTTPRITFYVLLIGCALATCYTTAGRVLRSLTRKARRTDRAAQALADLADSGPLAELGAKAAPRKPRRYLAPCLALCGAVMLVTAADTSAFGSWQLVLLAALYVTFVDRVMAAPLKGPLDWLVPPLFRAAEYGTILILAARSHVNGALPAAFGLVAAVAYHHYDTVYRIRGGTGAPPRWLVRAIGGHEGRILVVTALAALLYDGSHGARTQGFTIVLTALAVVIALAVLIESIRFWVSSGAPAVHDESGEPA
>NZ_CP015726.1|WP_063729133.1|8697294_8698032_+|phosphocholine-cytidylyltransferase-family-protein
MIGLVLAAGAGRRLRPYTDTLPKALVPVDGDTTVLDLTLGNFAEVGLTEVAIVVGYRKEAVYERKEALEQKYGLKLTLIDNDKAEEWNNAYSLWCARDAIKHTVILANGDTVHPVSVEKTLLAARGNGQKIILALDTVKQLADEEMKVVADPAKGVQKITKLMDPAEATGEYIGVTLIEGEAAADLADALKTTFERDPDLYYEDGYQELVNRGFKVDVAPIGDIKWVEIDNHDDLAKGRDIACQY
>NZ_CP015726.1|WP_063729132.1|8698019_8699093_+|iron-containing-alcohol-dehydrogenase-family-protein
MPVLTRLIPSPLVVDIRAGALDDLAGVLADQRISSSGKLAVAISGGSGAVLRERLAPALPGASWYEVGGGTLDDAIKLADRMKSGHYDAVVGLGGGKIIDCAKFAAARIGLPLVAVATNLSHDGLCSPVATLDNDAGRGSYGVPNPIAVVIDLDVIREAPVRFVRSGIGDALSNISAVADWELSARETGEQIDGLAAAMARQAGEAVLRHPGGVGDDGFLQVLAEGLVLTGISMSVAGDSRPASGACHEINHAFDLMFPKRAASHGEQCGLGGAFAMYLRGEHEQSAFMAEVLHRHGLPVLPEEIGFTVDEFVQVVEYAPKTRPGRYTILEHLDLSSDAIRDAYADYAKAVSQAISG

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Crispr_ID: NZ_CP015726_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_13

8804526-8804675

Orphan

Consensus_repeat	Method
CAGCCCCTCCGGCGTTTGAGGAGCGGGGTCCGGGGCGGAGCCTCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_13

>merge|NZ_CP015726|13|8804526-8804675|CRISPRCasFinder
CAGCCCCTCCGGCGTTTGAGGAGCGGGGTCCGGGGCGGAGCCTCGGCGGGGGTGCAGGGGGCGGAGCCCCCGCAACGGGGTCGGGCGGACCGTGCCCGACCACTCAGCCCCTCCGGCGTTTGAGGAGCGGGGCCGGGGCGGAGCCTCGGG

>NZ_CP015726|13|12|8804526-8804675|CRISPRCasFinder
CAGCCCCTCCGGCGTTTGAGGAGCGGGGTCCGGGGCGGAGCCTCGG	CGGGGGTGCAGGGGGCGGAGCCCCCGCAACGGGGTCGGGCGGACCGTGCCCGACCACT
CAGCCCCTCCGGCGTTTGAGGAGCGGGGCCGGGGCGGAGCCTCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_086015855.1\|8803732_8804230_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|235116
NZ_CP015726.1\|WP_063729059.1\|8809705_8810947_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180883
NZ_CP015726.1\|WP_063729060.1\|8808070_8809441_-\|ferredoxin-reductase-family-protein	unknown	unknown	gnl\|CDD\|99795
NZ_CP015726.1\|WP_063729068.1\|8799146_8800175_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP015726.1\|WP_063729065.1\|8802426_8803638_+\|acetylornithine-transaminase	unknown	unknown	gnl\|CDD\|235112
NZ_CP015726.1\|WP_063729063.1\|8805759_8806350_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|334450
NZ_CP015726.1\|WP_063729061.1\|8807606_8808056_-\|FMN-binding-protein	unknown	unknown	gnl\|CDD\|214897
NZ_CP015726.1\|WP_063729064.1\|8804698_8805688_-\|bile-acid:sodium-symporter-family-protein	unknown	unknown	gnl\|CDD\|223462
NZ_CP015726.1\|WP_063729067.1\|8800171_8801329_+\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|235441
NZ_CP015726.1\|WP_063729069.1\|8797573_8798479_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176115
NZ_CP015726.1\|WP_063729058.1\|8810986_8813017_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_159402751.1\|8795315_8795747_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380186
NZ_CP015726.1\|WP_063729073.1\|8791616_8792249_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP015726.1\|WP_063729072.1\|8792344_8793442_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063729226.1\|8813269_8813668_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063729062.1\|8806401_8806788_+\|DUF488-family-protein	unknown	unknown	gnl\|CDD\|225730
NZ_CP015726.1\|WP_063729066.1\|8801491_8802430_+\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|234869
NZ_CP015726.1\|WP_063729057.1\|8813648_8814815_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP015726.1\|WP_063729228.1\|8795860_8797333_-\|FAD-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|236214
NZ_CP015726.1\|WP_063729227.1\|8806809_8807553_-\|FAD:protein-FMN-transferase	unknown	unknown	gnl\|CDD\|376782

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_086015855.1\|8803732_8804230_+\|arginine-repressor	gnl\|CDD\|235116	PRK03341, PRK03341, arginine repressor; Provisional.	5.69418e-81
NZ_CP015726.1\|WP_063729059.1\|8809705_8810947_+\|hypothetical-protein	gnl\|CDD\|180883	PRK07206, PRK07206, hypothetical protein; Provisional.	0.000820867
NZ_CP015726.1\|WP_063729060.1\|8808070_8809441_-\|ferredoxin-reductase-family-protein	gnl\|CDD\|99795	cd06198, FNR_like_3, NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) which then transfers a hydride ion to convert NADP+ to NADPH.	1.25735e-58
NZ_CP015726.1\|WP_063729068.1\|8799146_8800175_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	2.53626e-176
NZ_CP015726.1\|WP_063729065.1\|8802426_8803638_+\|acetylornithine-transaminase	gnl\|CDD\|235112	PRK03244, argD, acetylornithine transaminase.	0
NZ_CP015726.1\|WP_063729063.1\|8805759_8806350_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|334450	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase. Family of domains with putative PNPOx function. Family members were predicted to encode pyridoxamine 5'-phosphate oxidase, based on sequence similarity. However, there is no experimental data to validate the predicted activity and purified proteins, such as yeast YLR456W and its paralogs, do not possess this activity, nor do they bind to flavin mononucleotide (FMN). To date, the only time functional oxidase activity has been experimentally demonstrated is when the sequences contain both pfam01243 and pfam10590. Moreover, some of the family members that contain both domains have been shown to be involved in phenazine biosynthesis. While some molecular function has been experimentally validated for the proteins containing both domains, the role performed by each domain on its own is unknown.	3.64467e-09
NZ_CP015726.1\|WP_063729061.1\|8807606_8808056_-\|FMN-binding-protein	gnl\|CDD\|214897	smart00900, FMN_bind, This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.	9.42904e-08
NZ_CP015726.1\|WP_063729064.1\|8804698_8805688_-\|bile-acid:sodium-symporter-family-protein	gnl\|CDD\|223462	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only].	6.50707e-83
NZ_CP015726.1\|WP_063729067.1\|8800171_8801329_+\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|235441	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.	0
NZ_CP015726.1\|WP_063729069.1\|8797573_8798479_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176115	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.12288e-48
NZ_CP015726.1\|WP_159402751.1\|8795315_8795747_+\|hypothetical-protein	gnl\|CDD\|380186	NF033179, TnsA_like_Actin, TnsA-like heteromeric transposase endonuclease subunit. The transposase of transposon Tn7 contains multiple subunit. Members of this family are largely restricted to the Actinobacteria, resemble the endonuclease subunit TsnA of the multimeric transposase of Tn7 and its relatives, and occur in genomic neighborhoods that suggest a similar role in transposition.	0.00616466
NZ_CP015726.1\|WP_063729073.1\|8791616_8792249_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.78876e-09
NZ_CP015726.1\|WP_063729062.1\|8806401_8806788_+\|DUF488-family-protein	gnl\|CDD\|225730	COG3189, COG3189, Uncharacterized conserved protein [Function unknown].	5.60142e-42
NZ_CP015726.1\|WP_063729066.1\|8801491_8802430_+\|acetylglutamate-kinase	gnl\|CDD\|234869	PRK00942, PRK00942, acetylglutamate kinase; Provisional.	5.86556e-149
NZ_CP015726.1\|WP_063729057.1\|8813648_8814815_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	2.07078e-59
NZ_CP015726.1\|WP_063729228.1\|8795860_8797333_-\|FAD-binding-dehydrogenase	gnl\|CDD\|236214	PRK08274, PRK08274, FAD-dependent tricarballylate dehydrogenase TcuA.	0
NZ_CP015726.1\|WP_063729227.1\|8806809_8807553_-\|FAD:protein-FMN-transferase	gnl\|CDD\|376782	pfam02424, ApbE, ApbE family. This prokaryotic family of lipoproteins are related to ApbE from Salmonella typhimurium. ApbE is involved in thiamine synthesis. It acts as an FAD:protein FMN-transferase, catalyzing the attachment of an FMN residue to a threonine residue of a protein via a phosphoester bond in such bacterial flavoproteins.	2.01913e-56

>NZ_CP015726.1|WP_086015855.1|8803732_8804230_+|arginine-repressor
MPQTRTARHRRIVDILNRQPVRSQSQLAKLLADDGLSVTQATLSRDLDELGAVKIRNTGGELIYAVPSEGGDRTPRAPLGESASEARMARLAAELLISAEASANLVVLRTPPGAAQFLASAIDSAELHVILGSIAGDDTVLLISRDPAGGQALADHLLRLAQKAR
>NZ_CP015726.1|WP_063729065.1|8802426_8803638_+|acetylornithine-transaminase
MSNVELTQRWQGAMMDNYGTPRVPLTHGEGATVWDADGKEYLDFVSGIAVNSLGHAHPAVVRAVSDQIATLGHVSNLFVAEPPVALAERLLQLCGRAGRVYFSNSGAEAVEAAFKIGRRTGRTHMVATTGGFHGRTMGSLALTGQPAKQEPFLPLPGDVTHVPYGDVEALRAAVTTDTALVILEPIQGENGVIVPPAGYLAAAREITRATGTLLVLDEVQTGIGRTGHWFEHQAQGVEPDVVTLAKGLGGGLPIGATLAFGPAADLLTPGQHGSTFGGNPVSCAAAVAVLDTIEADGILDRVKRAGERLRDGIESLDHALIGHVRGAGLLLGIVLTESLAPQVQQAAQDAGLLVNATGPDVVRLAPPLVVGDDEVDTLLRGLPGVLTAVQNAAHAAQEGQGER
>NZ_CP015726.1|WP_063729066.1|8801491_8802430_+|acetylglutamate-kinase
MTVNHSQERKNPARKHTAQPKARILIEALPWLTRHHGKTVVIKFGGNAMVDDELKAAFAQDVVFLRHAGLRPVVVHGGGPQISAQLDRHGLVSEFKAGLRVTTDDAMDVVRMVLAGQVQRELVGLLNQHGPLAVGMTGEDAHLMSATKHFAEIDGEQVDIGRVGQITDIDTGAIQALLDDGRIPVVSSIARSSDDGHVYNVNADTAAAALAAALNAETLMVLTDVEGLYADWPDSDEVISQLGASELEKLLPELASGMVPKMQGCLHAVRNGVTNARVIDGRVQHSILLEIFTDEGIGTMVVPDAEDEGEDQ
>NZ_CP015726.1|WP_063729067.1|8800171_8801329_+|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MSVTAAKGFTASGVAAGIKENGNPDLALVVNNGPRLAAAGVFTSNRVKAAPVLWSEQVLKGGQVSAVVLNSGGANACTGPLGFQDTHQTAEKAAEVLGHSAGEVAIASTGLIGLRLPMDPLMSGLETAAAALSEHGGEKAAIAIKTTDTVHKTAVAQGPDEAWTVGGMAKGAGMLAPGLATMLVVLTTDADVEAPALDAALRDATRTTFDRIDSDGCMSTNDTVLLLASGASGVTPAEDAFAEAVRTVCADLARQLIGDAEGASKDIRIEVVGAATEDDAVEVGRSIARNNLLKCAIHGEDPNWGRVLSAIGTTSAVFDPDQLNVAINDVWVCKNGSVGEDRELVDMRYREVRITADLAAGGESAVIWANDLTADYVHENSAYSS
>NZ_CP015726.1|WP_063729068.1|8799146_8800175_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MAIRAAVAGASGYAGGEVLRLLLAHPEVEIGALTGNSNAGQPLAALQPHLLPLADRVLAPTGAEALAGHDVVFLALPHGQSAAVAEQLGDQVLVIDCGADFRLEDAADWEKFYGSPHAGTWPYGLPELPGARAALKGSRRVAVPGCYPTAVSLALFPAYAAGLVGPEAVIVAATGTSGAGKSPKPHLLGSEVMGSMSPYGVGGGHRHTPEMIQNLSAAAGERVSVSFTPTLAPMSRGILATCSAPAKPGVTAGTLRAAYEKALGDEPFVHLLPEGQWPSTAAVYGSNSALLQVALDEAAGRVIVISAIDNLTKGTAGGAVQSMNIALGLPEELGLSTIGVAP
>NZ_CP015726.1|WP_063729069.1|8797573_8798479_+|LysR-family-transcriptional-regulator
MSFDVRRMLVLAEVARRGSITAASIALSYTPSAVSQQISRLEAEAGQPLIARHPRGVTLTEAGRALAEHAARIDRQLRAARRSLDDIAGLHSGTLHIGTFPTIAASLLPRVVRAFRTRYPQVELAVHSDRNAGLMDILESREIELSLMWDYPWRRLDETNLDVIHLLDDHTCLVVATSHPLAARHSAGFEELAEENWIVRGDHPVAELLTRSCRAAGFEPKIAYRAHDYQEAQAMAAVGLGITLAPRFALASLRDDVTTIDLGPAAPVRRILLTRLRDNPPTPSAKALAELFVETAGTLCS
>NZ_CP015726.1|WP_063729228.1|8795860_8797333_-|FAD-binding-dehydrogenase
MTEQWDVVVVGGGNAGFSAAQSARQQGARVLLLEKAPRQWAGGNSYFTAGAMRTSHGGLTDLTSLVEPLPADRAGRVDLAPYTDDDFLADLTRVTQGRTDPELARILVGESRETMTWLRSLGLRFELMFHRQAYEVDGRYRFWGGLAVGVVGGGKGMIDQHLAAADRSGIEVRFDSPVTGLATGPDGSVRGVMLADGQRIEADGVVLTSGGFEANPQMRAGYLGAGWDLALVRGTPHNTGEGIRMALAAGAQPYGHWGGCHAVAWDSQARATGDRELTNQLTRGGYPFGIVVNAEGRRFVDEGADFRNYTYAKYGAEILKQPAGVAYQLFDATSAPLLRPEEYASAGVTRVESDTVEGLAKELGIDEGRLAETVERFNAAVVPGRFDPTIKDGCRTEGITPPKSNWAQPLTTPPYVAFPVTCGITFTFGGLRIDAEAHVLDLSGRPVPGLYAAGELVGGLFWFNYPGGSGLTAGSVLGRRAGRSAAADTR
>NZ_CP015726.1|WP_159402751.1|8795315_8795747_+|hypothetical-protein
MSEVRVDDVPAGPVWSHACQLDDLALSYVLPGRATERLDLEPGWPRTWKAGRSDVITPVKDLSEGPAMASVPVRRFAWPTGQRHRPGLECLVTTGRQHAFEIGRISTANRTWTLMLFQAQASGPHHERECRGQPARGEENALH
>NZ_CP015726.1|WP_063729072.1|8792344_8793442_+|hypothetical-protein
MGAGTESDGSSRSDEEWERFLRESVAGAADAPKEPSARARDVAKRLRAEPDRGPEGWRSYTPARPKRRTGWYVVGLLAALLLVVALAPGWTVGLFAGDDSDSPPLGAETARPTDVPPAEAAQRPTMDEPFRGSPAADWASGAAGITVPKARAVGWMSAAEVERSLARSRDFLVASGLDRGVLRGERPEKAIALINPHQRDVQGLLKTAFRAPSEKNDPLLLFSRFQPSRAQLVGDIVKTRGRLTYREGERGALQVTADVTFVYPVTRADAGGDDEIVRTIVRRELVLSWDNPAKVITEPGTFSIVSYKYDMTNGGCGAPTGYFTPPFGSDRRADETGTEVDPYDRTAPVGRGESSGDECARATRS
>NZ_CP015726.1|WP_063729073.1|8791616_8792249_+|TetR/AcrR-family-transcriptional-regulator
MRADAQRNAEKLRTAAAELFQERGLQVPLKEIARRAGVSHGTLYNLFGTREALIDEVVTDLAADRLDEAAEHALSLEDAWAGFAYYIETVCELQATDPALADVLSGRYPGAERLMALCDRAHDASTRIIERAQQAGALRPDFTGEDLLFVFGTNALLTRAAADAAPDAWRRGVAFMLDGLRTQAAQKPLPVGPLTPQQMYDVMGRLSGTP
>NZ_CP015726.1|WP_063729064.1|8804698_8805688_-|bile-acid:sodium-symporter-family-protein
MRSEPKSPATDSVEPVAEPADRAARRAVTVFPLLVLAAGVAGLSTPGTFTGWAPQVPYLLGVIMFCMGLTMTPADFTGVVKRPWAVALGLVAHYVIMPGLGWLIANALGLPPQLAAGVILVGCAPSGTASNVVTYLARGDVALSVSVATVSTVLAPLVTPPLTLLLAGEFLPVDAASMVTDILKTVLLPVVGGLVVRLVAGRLIVRALGVLPWLSAVTIGVIVAVVVAGSAEAIRSAAALVLLAVVLHNGLGLALGYAAGKVARLGAPASRAMAFEVGMQNSGLAASLAAAHFSPLAALPAAVFSVWHNVSGSVVAAWMARRGRRSEAG
>NZ_CP015726.1|WP_063729063.1|8805759_8806350_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MGKEYERIDGRLRTFIEQQKIFFTATAPLAGDGTVNLSPKGVSGSFAVLDELTVAYLDFSGSNAETIAHLRENGRITLMWCAFDGPPNIVRVHGRGEPVFRDDPRFAELVKHFPSVDVHTHGLRAVIVVTAEQIRDTCGYAVPFMDYREDRTLHAQRFRREDDETKLTAYCERKEHVASSLDGLPGLPLPLPPLSL
>NZ_CP015726.1|WP_063729062.1|8806401_8806788_+|DUF488-family-protein
MADKDGRRDRPGIRVRRVYDAPEPDDGTRVLVDRIWPRGLAKADARLAEWVKAAAPSTELRRWYGHDPERYAEFARRYRAELAEPEHREAVDHLRELAGHGTLTLLTAVKDLSHGHAGLLADAVRGHR
>NZ_CP015726.1|WP_063729227.1|8806809_8807553_-|FAD:protein-FMN-transferase
MGTVFSFDLREVHDADRPRVLAALDGAVVGLHRVDELFSTYRRDSQISRLGREELTLSQCEPEVRDVLELCEEFTYRSDGWFTPHYAGGRPDPTGLVKGWAVERAARMLASAGAGSVCVNGGGDVQVHGGPWRVGIADPTRRGELLAVVEAHGELAVATSGPAERGCHILDPHTGRPPADGLASVTVVGTSLTEADAWATAACAMGAERARPWLQRQPGAEAFVVTAEGTTWQTSGFTRYSAELCVS
>NZ_CP015726.1|WP_063729061.1|8807606_8808056_-|FMN-binding-protein
MKRKHPLRRILLGTAATVAGVVALLALKQPAGGQNVAGPPAGQAPPVAATAPQGAGGGGGQTLTGDVVNTQYGPVQVSVTMSGGKVTAAQAVKTPNSGPRSEQIAKDSIPKLNQQAVSAAKVDTVSGATYTSEGYAKSLQSALDKAGTK
>NZ_CP015726.1|WP_063729060.1|8808070_8809441_-|ferredoxin-reductase-family-protein
MTTLLNSRAGRRLALRQIRPRRSPAVPLVLLSWAGAAAVLSLWWFNTPNVTGNAAWLNGAGRLSGLLAGYVLALVVLQMARVPALERRVGSDRVARWHAMSGRYALCLILAHVGLIIAGYATQGGISFVEQTETMVLTFPDMLEATIGTVTLVVIGLISAGMVRRRLPYEVWYYLHLLTYAAVFLTFWHQLSNGAEFVGDMTAQTAWYVLYGAVSALAIWYRLLVPLRLNMRHRMKVEAVVQEAPGIVSVLIKGRKLHRIGAEAGQFFRWRFLAPGLRWGSHPYSLSAPPRPNLLRITVKAVGGGSTRLADLKPGTRIWAEGPYGAMTASRRSQGKVLMIAGGAGITPIRALFETLPGKGGDLTLLYRARTVEDLALWGELKQIATERDARLLYAVNGPDGARPEISAERLRALLPDIDEHDVYLCGPPGLTEHAYEALHDAGVPDRRIHHESFEL
>NZ_CP015726.1|WP_063729059.1|8809705_8810947_+|hypothetical-protein
MPQVEPTTRNPDKGYVALLGWSLNAVEALDRFDRRYVVVAPEWAEEYCVEHDIPYLPWNFERLNDRSMEIAETLQNEGVDVAIPLFEETVEWAGAINSVLLDNPRLYGQSMLLRDKALMKRRAQLGGIRVGIFEEAHDRDDVIRFLKRVNQTLLKLDGDPNDPIHLKAFDKAGCLGHRVIRTPDEIDTIPDDEFPVLMESHLDGWEFAVEAWVHNGKIKFLNISEYVTLGYSVFVPATPELERYRPQITAQIEKLIKTFDIEFGFVHPEYFVTSDGEMYFGEVAYRPPGFKVFELLERAYGFNAYHGLVLAFDPKTTEEEIDAFFPREVVDASGVAGCFGVYPRRRVVSDLEIPEETEDDDYYESHDLSTPLEETVTKRTAFGTHWGLVYFFGDDPYRMRDLLKKQEELDFYV
>NZ_CP015726.1|WP_063729058.1|8810986_8813017_+|hypothetical-protein
MKPTVDVSSEATTLDKRVTSLDDAIQAMAETRDFGKHTKLRRVLEALRRVLMQPGGPAAVQARAQALEEAGLFQGTDWASPEILIPALVGPGLHSGDADTVVMEATSELRMLAVARGDFAHPTLSAEDARQFLSQVLAMNLELLFTPPSEAERTQQGRTAQLIRDLFRHLADGIGYDSVLDNLVDEIWRILRQRPIQVEAVQSLITRISIYLDDPDVALGVSSGLGIDRLITSLFGTTESCREDPGIEVFRSRLEAMDAGGLQYEAAGFARAMHDTGLVSPYHAELLRFLLSESDYLVGEALGLSDTGRNCLLRYSELVHRLIEVAVHPQTAQSVYGLALLLDRGILYEPPIVPALWRQLALELSPAARERLTTIFGEVPGPRARLVAGVLSMLGQPLGVGQGDNPTCQSARALSMWSYNDPDYLLQMVVWAARDDEIIMHFEGQPISSKDSATGVASTLPMDLDPVSLLVVPHLDRIYAEMGRRCAGRPGDPHRWVNPEFHGWWAGRGFHINVDVATGNLVDLDEFLRQFHATYHPSYNGEQPLIHPQPAGVAVTDSAARYVGWHAITILRAVPDPQDVMRVYFFNPNNDSGQDWGDGVVVSTAGNGERFGEASLPFDQFASRLYIFHADPLERGEPERVPAEDVARIIGYIERSWGNDRLPAGMLQALERPTSL
>NZ_CP015726.1|WP_063729226.1|8813269_8813668_+|hypothetical-protein
MAGVPQVPACRVCASYPAAEVTIRGHVGMLIMMRFQKWPGPYCRTCGTAMRREATTNTLWQGWWSPFSMVIFNPYTIISNLVVRGKLNKLPEPGPAPYGTRPDPGKSVLQRPAAYVALLPILWFLFLIVRGG
>NZ_CP015726.1|WP_063729057.1|8813648_8814815_-|MFS-transporter
MPFAIYVLGLAVFAQGTSEFMLSGLGPDIASDLNVSIPAAGALTSAFAVGMIVGAPLMALLSMRWPQRRALLVFLSAFMAVHVVGASTTSFAVLLATRVLGALANAGFLAVGLAAATGMVSSSAKGRATSALLGGVTLACVAGVPAGALLGQVWGWRSAFWAVALVSVPALFAIVWSVPRTEAVEAPSARGELRALRSPRLLVTLGLGMLVNAATFCTFTYLTPLITNVSGFGESWVPAVLALFGLGSFAGVTVAGRWSDARPMLVLVPGGAALLVGWLLLSVGADRPGVAVVLVLVQGMLSFGVGSTLITRALYAAAEAPALGGAFATAALNVGAAVGPALGGLTLGAGLGYRSPVWVSALLVALAFAVAGLASAAPSGALANRRGR

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Crispr_ID: NZ_CP015726_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_14

9123102-9123914

Unclear

Consensus_repeat	Method
GTTGCGACCCCTCCAGGGGTGATGACGAC	CRISPRCasFinder
ACCCCTCCAGGGGTGATGACGAC	CRT
GTTGCGACCCCTCCAGGGGTGATGACGAC	PILER-CR

12 spacers

cas6,cas7,cas5,cas3,cas1,cas2

The CRISPR arrays of NZ_CP015726_14

>merge|NZ_CP015726|14|9123102-9123914|CRISPRCasFinder,CRT,PILER-CR
GTTGTGCCCCCTCCAGGGGTGATGACGACGTGGAGGGGCCAAACCTTCGGCCGCCAGCCCATCGCATTGCTACCCCTTCAGAGGTGATGACGACCCAGTTGCCCCTTGCATCCGCGTACCCGGACCGTAGTTGCTACCCCTCAAGGGGTGATGATGGCCCGACTGGCGTCACACGATCCACGCCAGCGCGCCGGTTGCTACCCCTCCAGGGGTGATGACGACAAGTCCATCTCGGGCGTGATCAACGGGACGCCGTTGTTGCGACCCCTCCAGGGGTGATGACGACATGTCCGCGCACGTCGACCGGCGGGGCAGTCCGCGACGTTGCGACCCCCTCCAGGGGTGATGACGACCCGGGGGATGGACGGTCAGCCGTGGGGTGCGCTGGTAGTTGCGACCCCTCCAGGGGTGATGACGACGGACGGGGGTCAGGGTGTCCCCCACCACCGTGTTGGGTTGCGACCCCTCCAGGGGTGATGACGACTCGAATGGGAGGGCGAGCTGAAGGACACCCTGCTGGGGTTGCGACCCCTCCAGGGGTGATGACGACTGGTGGCTGGCCGGGTGTTCATCACCCCGTCCGCCCGTTGCGACCCCTCCAGGGGTGATGACGACTCGACGAAGGCCCCGTCACCATCAGCGGCAAGTCGCTGTTGCGACCCCTCCAGGGGTGATGACGACCGCCACGCTCCTGTCCCTGGCCTGCTTGCGGGACCACTGTTGCGACCCCTCCAGGGGTGATGACGACCGGCTCGGTCGGCGGCCATCCCCGGGCCGCGCCCCGGTTGCGACCCCTCCAGGGGTGATGACGAC

>NZ_CP015726|14|13|9123102-9123914|CRISPRCasFinder
GTTGTGCCCCCTCCAGGGGTGATGACGAC	GTGGAGGGGCCAAACCTTCGGCCGCCAGCCCATCGC
ATTGCTACCCCTTCAGAGGTGATGACGAC	CCAGTTGCCCCTTGCATCCGCGTACCCGGACCGTA
GTTGCTACCCCTCAAGGGGTGATGATGGC	CCGACTGGCGTCACACGATCCACGCCAGCGCGCCG
GTTGCTACCCCTCCAGGGGTGATGACGAC	AAGTCCATCTCGGGCGTGATCAACGGGACGCCGTT
GTTGCGACCCCTCCAGGGGTGATGACGAC	ATGTCCGCGCACGTCGACCGGCGGGGCAGTCCGCGACG
TTGCGACCCCCTCCAGGGGTGATGACGAC	CCGGGGGATGGACGGTCAGCCGTGGGGTGCGCTGGTA
GTTGCGACCCCTCCAGGGGTGATGACGAC	GGACGGGGGTCAGGGTGTCCCCCACCACCGTGTTGG
GTTGCGACCCCTCCAGGGGTGATGACGAC	TCGAATGGGAGGGCGAGCTGAAGGACACCCTGCTGGG
GTTGCGACCCCTCCAGGGGTGATGACGAC	TGGTGGCTGGCCGGGTGTTCATCACCCCGTCCGCCC
GTTGCGACCCCTCCAGGGGTGATGACGAC	TCGACGAAGGCCCCGTCACCATCAGCGGCAAGTCGCT
GTTGCGACCCCTCCAGGGGTGATGACGAC	CGCCACGCTCCTGTCCCTGGCCTGCTTGCGGGACCACT
GTTGCGACCCCTCCAGGGGTGATGACGAC	CGGCTCGGTCGGCGGCCATCCCCGGGCCGCGCCCCG
GTTGCGACCCCTCCAGGGGTGATGACGAC

>NZ_CP015726|14|1|9123108-9123914|CRT
CCCCCTCCAGGGGTGATGACGAC	GTGGAGGGGCCAAACCTTCGGCCGCCAGCCCATCGCATTGCT
ACCCCTTCAGAGGTGATGACGAC	CCAGTTGCCCCTTGCATCCGCGTACCCGGACCGTAGTTGCT
ACCCCTCAAGGGGTGATGATGGC	CCGACTGGCGTCACACGATCCACGCCAGCGCGCCGGTTGCT
ACCCCTCCAGGGGTGATGACGAC	AAGTCCATCTCGGGCGTGATCAACGGGACGCCGTTGTTGCG
ACCCCTCCAGGGGTGATGACGAC	ATGTCCGCGCACGTCGACCGGCGGGGCAGTCCGCGACGTTGCGA
CCCCCTCCAGGGGTGATGACGAC	CCGGGGGATGGACGGTCAGCCGTGGGGTGCGCTGGTAGTTGCG
ACCCCTCCAGGGGTGATGACGAC	GGACGGGGGTCAGGGTGTCCCCCACCACCGTGTTGGGTTGCG
ACCCCTCCAGGGGTGATGACGAC	TCGAATGGGAGGGCGAGCTGAAGGACACCCTGCTGGGGTTGCG
ACCCCTCCAGGGGTGATGACGAC	TGGTGGCTGGCCGGGTGTTCATCACCCCGTCCGCCCGTTGCG
ACCCCTCCAGGGGTGATGACGAC	TCGACGAAGGCCCCGTCACCATCAGCGGCAAGTCGCTGTTGCG
ACCCCTCCAGGGGTGATGACGAC	CGCCACGCTCCTGTCCCTGGCCTGCTTGCGGGACCACTGTTGCG
ACCCCTCCAGGGGTGATGACGAC	CGGCTCGGTCGGCGGCCATCCCCGGGCCGCGCCCCGGTTGCG
ACCCCTCCAGGGGTGATGACGAC

>NZ_CP015726|14|2|9123295-9123914|PILER-CR
GTTGCTACCCCTCCAGGGGTGATGACGAC	AAGTCCATCTCGGGCGTGATCAACGGGACGCCGTT
GTTGCGACCCCTCCAGGGGTGATGACGAC	ATGTCCGCGCACGTCGACCGGCGGGGCAGTCCGCGACGTTGCGAC
CCCCTCCAGGGGTGATGACGACCCGGGGG	ATGGACGGTCAGCCGTGGGGTGCGCTGGTAGTTGCGA
CCCCTCCAGGGGTGATGACGACGGACGGG	GGTCAGGGTGTCCCCCACCACCGTGTTGGGTTGCGA
CCCCTCCAGGGGTGATGACGACTCGAATG	GGAGGGCGAGCTGAAGGACACCCTGCTGGGGTTGCGA
CCCCTCCAGGGGTGATGACGACTGGTGGC	TGGCCGGGTGTTCATCACCCCGTCCGCCCGTTGCGA
CCCCTCCAGGGGTGATGACGACTCGACGA	AGGCCCCGTCACCATCAGCGGCAAGTCGCTGTTGCGA
CCCCTCCAGGGGTGATGACGACCGCCACG	CTCCTGTCCCTGGCCTGCTTGCGGGACCACTGTTGCGA
CCCCTCCAGGGGTGATGACGACCGGCTCG	GTCGGCGGCCATCCCCGGGCCGCGCCCCGGTTGCGA
CCCCTCCAGGGGTGATGACGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063729204.1\|9132043_9132307_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP015726.1\|WP_063728807.1\|9134062_9134641_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239488
NZ_CP015726.1\|WP_063728808.1\|9131057_9132038_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP015726.1\|WP_079151810.1\|9128114_9130541_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP015726.1\|WP_063728818.1\|9114711_9116121_-\|B12-binding-domain-containing-radical-SAM-protein	unknown	unknown	gnl\|CDD\|223963
NZ_CP015726.1\|WP_159073482.1\|9118959_9119448_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99777
NZ_CP015726.1\|WP_063728816.1\|9117374_9118037_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_159073481.1\|9119549_9120041_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_159073478.1\|9135834_9136377_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063728819.1\|9113671_9114628_-\|LD-carboxypeptidase	unknown	unknown	gnl\|CDD\|132882
NZ_CP015726.1\|WP_159073479.1\|9134637_9135711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063729207.1\|9122388_9122937_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP015726.1\|WP_159073480.1\|9120817_9122428_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063728812.1\|9124269_9124959_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP015726.1\|WP_063729209.1\|9118033_9118828_-\|endonuclease/exonuclease/phosphatase	unknown	unknown	gnl\|CDD\|226098
NZ_CP015726.1\|WP_063728811.1\|9124946_9126395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063728810.1\|9126395_9127469_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP015726.1\|WP_063728809.1\|9127452_9128133_+\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|187824
NZ_CP015726.1\|WP_159073483.1\|9116117_9117149_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|274251
NZ_CP015726.1\|WP_079151811.1\|9120037_9120526_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063729204.1\|9132043_9132307_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.98079e-22
NZ_CP015726.1\|WP_063728807.1\|9134062_9134641_-\|hypothetical-protein	gnl\|CDD\|239488	cd03394, PAP2_like_5, PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	0.000196268
NZ_CP015726.1\|WP_063728808.1\|9131057_9132038_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	5.23758e-135
NZ_CP015726.1\|WP_079151810.1\|9128114_9130541_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.99752e-43
NZ_CP015726.1\|WP_063728818.1\|9114711_9116121_-\|B12-binding-domain-containing-radical-SAM-protein	gnl\|CDD\|223963	COG1032, COG1032, Fe-S oxidoreductase [Energy production and conversion].	2.12392e-35
NZ_CP015726.1\|WP_159073482.1\|9118959_9119448_-\|hypothetical-protein	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	1.68643e-11
NZ_CP015726.1\|WP_063728809.1\|9127452_9128133_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187824	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.95401e-17
NZ_CP015726.1\|WP_063728819.1\|9113671_9114628_-\|LD-carboxypeptidase	gnl\|CDD\|132882	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment of preformed D-Ala-D-Ala dipeptides. Some enzymes possessing LD-carboxypeptidase activity also act as LD-transpeptidase by replacing the terminal D-Ala with another D-amino acid. MccF contributes to self-immunity towards microcin C7 (MccC7), a ribosomally encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. Its possible biological role is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	2.63461e-82
NZ_CP015726.1\|WP_063729207.1\|9122388_9122937_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.25042e-05
NZ_CP015726.1\|WP_063728812.1\|9124269_9124959_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.31221e-22
NZ_CP015726.1\|WP_063729209.1\|9118033_9118828_-\|endonuclease/exonuclease/phosphatase	gnl\|CDD\|226098	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only].	9.24373e-08
NZ_CP015726.1\|WP_063728810.1\|9126395_9127469_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.05083e-80
NZ_CP015726.1\|WP_159073483.1\|9116117_9117149_-\|radical-SAM-protein	gnl\|CDD\|274251	TIGR02668, moaA_archaeal, probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666). [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.0295e-39
NZ_CP015726.1\|WP_079151811.1\|9120037_9120526_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	2.04187e-18

>NZ_CP015726.1|WP_063729207.1|9122388_9122937_-|GNAT-family-N-acetyltransferase
MNTVSLTHHDGEDATALLEELCDAYADAYGAEPGEEKTSAFRRRAKKQLTRPGFTLVVARDEGRLVGFVFGYTLAAGDTHWWGGVQPEPSAEFLEETGSRTWVLSEIEVRRAWQGKGVGRTLHDAVLGARGEERATLATGPDAPAQKVYTGWGWQLVGRIPGDDGDYYSAYDLFVLELPVSR
>NZ_CP015726.1|WP_159073480.1|9120817_9122428_+|hypothetical-protein
MGAQPRSRRQEQVQFATELRAAGKTWSEVSTAIRRRYRVNARVAPRLARGLSQREVAELWNQRWPDDPRTFKNISTWELWPASTGHAPSLDTLNRLAQLYECAVPDLLADLPDHGPTPPEPSPVSGSTVAAAGAAPASGADFPDGLVAEPLMLPPQMAGTLVHRLHDLRFDELAQALIMWAQQANPGLNRRELLQKFSTALTVAAASPLLDIADADERDRVAAVLDEPSRLDLATIDHSERVLQHYRRQGDILGPQIALQTAMAQRQVTADLVTSAPAALRPRVLTVYAELSQMVGWQLYNLGDYRAAQYYYDDARTAAHDAENTELVTYVLCTMSQLATWQNKPRVGIDHAIAAQTWADQVDSPAARGYAADVAARAFAAAKQPDKAQRALEQEHAAVRDISVDAPAASWWYFFNESFYWGTEAECALTLGTPAKALSAARTSLPMIDPTNVHNHAHTLALQSQAHLQQGDIAEASAIVGDIARISSFNRSPRITERIADLRTALTPWQRSRAVRKLDDLLVHYRLTGSSSTNKS
>NZ_CP015726.1|WP_079151811.1|9120037_9120526_-|ATP-binding-protein
MALTGLGEVPCTRRLDHSETGQPVTHTGTVRIERTSQPGSELTDEDRAWPGRIRRIARAYLRNWDLASYTDRVELLLTELVTNALRHGRYEEIGVRLFHTSSQLCVEVADGSPGCPVRREAGPDDEYGRGIVLVEAYADDWGVTDDNTVTWCTLNLTAQDAS
>NZ_CP015726.1|WP_159073481.1|9119549_9120041_-|hypothetical-protein
MTSPALLDARLNRRLASALRYLAVAARGGVRPVGESWDVVVTRAGPSGTALLRSMDHHARPHRHCASVIADPSSQLLMWLVPLGTMRIWPNNHGLCLGSGEISVPPVSRNHPLPRTSAPYWVRPMHQHCLVSPPVLDRELAVAVLGEPRPNIVDLLPSRANAP
>NZ_CP015726.1|WP_159073482.1|9118959_9119448_-|hypothetical-protein
MTRRQPGSPTLSRREREALQLIANGMSTSQAAAEMKVTTDTVQGYLGHAAGKLGGMGDRAAAVHRSYVTGALAPPDAEPAGNLVVTSGQLRVLHGMAEGLSRQELAAGSGFYTDNVRGEERALTALLGAKSPAHLITCAWRQGWLGPESARGSKSATTPPVA
>NZ_CP015726.1|WP_063729209.1|9118033_9118828_-|endonuclease/exonuclease/phosphatase
MGTYNVLDGGGDRWRQQVQFLAGLHLDVLGIQEAKHWDARGCHRMFATARALGMQPLFAPSRHHGCHLVTLYRWPKVECTAFEPDVSGGEFHHTASRARFTAGGRAFSVVHTHLDPFSGQDRLSEVSWLTQYAAADEHTALIGDLNSIGAQDREQDDWRRIPIHLQPRHRMVRDDGSYGGTDRRAMAALMAAGFVDPPLQLQVPWGRTAGYWNDTELWDHRSDYVLLSPSLAPALRSYVVADTPTTQMLSDHLPVVATLHLDAL
>NZ_CP015726.1|WP_063728816.1|9117374_9118037_-|hypothetical-protein
MTQHRHGGLIVPYISSWSAETACIPSVVRKFGNMGPFLAYADETAYDRGQHGALWVRQPLARGKGHPLMDSVHALRQRQAMRHMLCQVCRTPAVEASPERQIFLLKAADGPLVDGTRTTAPPVCSSCAPLATDSCPRLSTGGHVAAWVERAEPWGVAGVLYDPETLRPVHDEGLVRVAHGSEEFRWVIAHREVVILHGCTAVDMNDLRRANRRAAAERGG
>NZ_CP015726.1|WP_159073483.1|9116117_9117149_-|radical-SAM-protein
MRLPQVRVTVNSRCGRACFYCRPSGEAVATQPGTDLDPDQLLMFAAAVREQGVTGIKLTGGDPALYEPLVEVVRRLRHEAGFSEVEVISRHPRIGVLAGDLAGAGTTLLNVSLDTLDAGLHKEICGVDDHRQVLDAISACVATGVPVKVNVVVMSGINTHEILDVIGFCEEAGVHSVKLLDIIKDLGEGTESFARRLEIKRHRQLDDLYVPLEDLAGDLRVRAIDEQIVRQGGLGHPMAVFTMPSGTKVLIKDSAAGAWYGSVCRGCPLFPCHDALMALRLTADARMQFCLLRENVAVDLAPMLEENDDIGLRARVEAAFEMYAGAYFRPGDSTPQELLEAQR
>NZ_CP015726.1|WP_063728818.1|9114711_9116121_-|B12-binding-domain-containing-radical-SAM-protein
MSEVFLGLPGGLAAGPALVEAASPTTGRPTVILLYPKIDHEKDYVYFWMPFSLLTIAKPLRESGLVDVVLFDGNQHDEAAWERFLDEHLGRAVCVGVSIMTGGGQIGHALKMVSAAKKRPFCPPVVFGGPHVNVQPEQTAAHPLVDAVLQGPGQNSMLDYVRSLLGRVRSRDVPGLLADRSGDVVRGRANPPRTGNLGAYPWDLLDVAKYIRDDPTVATRTLNYVSSQGCVYNCRFCFELTYRRKYSAMAAQDLLDDVGELKRLYDINGVKFYDADWFVNLRRSIGFCDGLIERGLDLKWAASINPNDIRKARRAKLPLLERIAESGCSRLLMGVESGNDRVLADVVKKEITRAEILDVASEIADAGILGSYTFIVGFPGESAAEQEDTYSLIDELRTLNPAPETRVHLFAPYPGTPLWDEALREGFEPPDTLEGWSSFDYYQSQTPWTSDATAARAREQTRMRLAPAR
>NZ_CP015726.1|WP_063728819.1|9113671_9114628_-|LD-carboxypeptidase
MITARILPAPVAKGDRIGIVTVSAPEPAQHPDAFSRGVEALRNSGFEPVIAEHALDLHGYRAGSEAKLLKDFHTYIADPSIAAVVCAGGGKNANRLLTGLDFPLIAEHPKPIVGVSDPSLLLNAITARSNVLTFHGPSVLWDWGAEDVPPVTGDHFTSILAGQAQAGRIDAPLAWARPGTADGHLVAGCLSSLRCLLGTPWEPHWNGAIFVWEDAFKPIETLDQTLTHFRDTGVLDKISGMVVGELLGCESSGGLGATEMVMDLCGEYGFPIAFGLPFGHTPLKYTLPIGAEARLDSGVEHGLTITSPWTAPPPGGTR
>NZ_CP015726.1|WP_063728812.1|9124269_9124959_+|CRISPR-associated-endoribonuclease-Cas6
MRIRVDVDTDTPSLRWEDVHGPARAVMYELLGSQDTVLARTLHDEGWKGQPLKPLGLTSPQFKGAPKKNGVYTTSSDGSVWFGSPVPEIAATLVASLASRTEIVWGSARLKVRGFNIDIGSEASDGLVELSTATPVVVKKESRYLLPGESHYLERLQHNLAHKADVLGLPAPQGLRVLEAGPRRRFTVRGAPRIGAQVRVAMEADARFVEALRSWGLGLDTVQGFGWIR
>NZ_CP015726.1|WP_063728811.1|9124946_9126395_+|hypothetical-protein
MDPVSASTTAAAPLSATSHPLQRAGAWAVAVLGGRETPQEITEADLDAVASRLVGDVSTAAVAAKETAAYDWWKVLFALYPNSKATHSKRPRDKATLREALAELFVTDDLHKPAHPCTFCGTPAAVVWAKSTLPMFDTNKALNTLPPGIAGWPVCRGCRIAAWALPYGAWITAGSATVLSCEEEAAERAFAARNVRRARQIMHLGFDGLVAGARAELVAVRAMRSLRTGLPAAATLWSFKNDNQEPWLRVTRTRRAVPVFLATVEGNAELSRGWRLLELVLARHDKNGQLLASGAGEAARLLFEAEDGRSRSLLRQLHYLLHASERHWSTRNRAALTRLAFTYAKEILGMNPDLKPVATVVADWIEHGSGNPRGRLAEYRNVALSDYKLGTLLMQAHFRLTLDGRPVVASPEDWRPLIQQRPRAWEQRMLLAATVLQILQERGVAVSEARAAEPDEEARTERLLEQPLLGLDDDDDDEMGAV
>NZ_CP015726.1|WP_063728810.1|9126395_9127469_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAYLAGKMVLAVEAGAPNNGKGEETKARVKFARIRGRHYPYISAQAVRRWTRDGMVELGAVPSPVTRVGKAQNKAQKANTQADPVRYADDDLFGYMKAGAKKDDAATTLRDSPFMLGTLMSVEPAYPTEDFGVMSRGVTEPVLHGHEFYTADLAAPFLLDLPRIGTFTLPDANGVGRPNYLTQEQALAVADAAAAGATSVRFRDQPAVRLPIEERRNRAALLLEALAHLSGGAKQALHYGDRVPALVVMVPFKGGINPLAHCVDGQEGTGLRVRGEVLRKELKAWEGEWEAPVRIGWRPGFRDDLREDFEKECATELAEGTIVIDHPRTILRGLAAELREGQLDGWFDDPTRDVREA
>NZ_CP015726.1|WP_063728809.1|9127452_9128133_+|CRISPR-associated-protein-Cas5
MSVKREPQPAWRAEFWAPVASFRDPLFPGLSHGLPVPPPSTVRGLLAAATGESAESLALGMAAWSEGSGVDAETYHPISADGSNPAVSGRVRAVKGGMTIRDRPFLAHVYLTVWLPGSDGDRIAGALRRPVWPMRLGRSQDVVHPLDLRRTTLHPADEATVDHALAPAGGHDVPSATVHRMAASVSTDRLNTSWADYLWCDAATGSYPVRNAYQDDQGQAVWLLTP
>NZ_CP015726.1|WP_079151810.1|9128114_9130541_+|CRISPR-associated-helicase/endonuclease-Cas3
MATDPLTPQARRRWLTDIRAKSTPVDDPERLTTHSRTVHDVVGQVEARVAAAGVLATEPAFWSRVRKAALLHDTGKIAEGFQQQLQPGGDFWGQRHEVLSLAYVDLLATAAGWSDEDRLMIATLVATHHRALHSSSSGVAGGKPPLAQTYNSHTRWDEAFTRTPLSGGDQVQVTRGLHQELVAWLAGFLAVDPPFATSGEATLADRARALLEHLLAAWQLPVKEHQGLLAVLAQGALTLADHVGSAHERLQTHMPLPADYLDRFPYAPYPHQQQAAATDGHLILIAPTGSGKTEAGLAWAARQLTTMPGLPRLVWTLPYRASLNAARERFRHSLVPAPGDQKADIGLLHGTIAHTLLTQALEDDCAAGPGADRREATVGQARRARARAGAMRLFAQRLRVATPHQLLRGAIAGPAYSSVLLEQTNSLFVLDELHAYEPETFGRLCAAMGLWERLGSRIAVLSATLAPPMITLIDESVTQRVACHRAPQGTSPVRHRLVVDDTPLTDPESVDRLRSWLRDGHSVLAVANTVARAQGLFDELADEAGEAAPSDPHAALLLHSRFKNRDRAAIEKHLLARHPERRLVDPAGRGGLVVATQTVEVSLQLDFDRGAVELAPVEAVAQRAGRVNRRGRHPDGPVEFRVHHTPRFRPYDTGAMDAAWQALTTLVEEGTDTLSEQDIDRLLALAYETEWGKKWAEAARRARDGFAADFLTFTDPFHDRSEFARTLSEQFDSVEVIHRDDVEEYARLTTGGKSEHFLLAAGLLIPLRYSQLPTYRGQYDRRLGVHVIDGEYDETTGLKPPQEPETIL
>NZ_CP015726.1|WP_063728808.1|9131057_9132038_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MPAVGRTYWLTEPCRIRREDNSVRIERPDGTPVRIPITDIRDLVTFDHVDINTSALSLLSRNGVTLHVLDHYGNHAGHFSPAESMSSASVVRRQVEITADPDQRLAVARSLVLATAENLRWALDTDLLDPALLSLRTALPDCKDSDEIMGQEGNFRRTGWTVLDTQLPAWLRLNGRTRRPPTNAGNAFISYLNTLVYARVLTALRSTPLHPAIGFLHSDTDRRRNTLALDLAEPFKPLFAERLLKRVASQKKLKPTDFETDVARASLSKDGRKKVAALVKEELATTVYHRMLKRKVSYEELIHLEALKIVRMCLEGKPYKPFRPWW
>NZ_CP015726.1|WP_063729204.1|9132043_9132307_+|CRISPR-associated-endonuclease-Cas2
MFVILVYDTAVERNPKVLKTCRKYLLWTQRSVFQGELSTAQYRALMAALNTTIDPDYDSIVTYTARSPDMVESSTLGVALGGPGDIL
>NZ_CP015726.1|WP_063728807.1|9134062_9134641_-|hypothetical-protein
MTSSRTARIITDTLAPANLVIAVLLIIGWHSTDSLTGLGWGLLAALFCGGIPFAIIMLGVKRGNWTDKHIRHRHQRAIPLLATMASVLTGIGLLVALDGPREVLALVLAMLAGLTLTITVTVWWKVSVHTAVASGVAVVLLIAYGLYMAPLFAGVALIGWSRVALRDHTPAQTVVGAFVGGLAAAVVFSLMR
>NZ_CP015726.1|WP_159073479.1|9134637_9135711_-|hypothetical-protein
MTIRPVKVASSVDTLVHIPNFAALIKHLSGLGATHAVLVFVHTMSEQSTAGLKARRSHVAVPIAAGFIISALFFATPQRREATDLLTEYAADGRIATYGVLWTTMLGMALISATALCWRWGRQPDTGLLGHGLRLTGIGTTIGMAYAVHRIAMVTLRYLGYAPISPRTDQGISSLLLGSALIFIMFGSTLPALPRLLRWWRDYRDLLRLYPLWHSLTEVVPSVRLDPPRGITAERLTLRHTHQRLYRRNIEIRDAILDLRNRTSGALRDQAIAHVTSRGLTGAYADIAAEACWLAAVKDSRFRGKPTRGEHHPPASGGRDLASEIPALKALAAAYHSDLASDFTAQCTSARPPETNA
>NZ_CP015726.1|WP_159073478.1|9135834_9136377_-|hypothetical-protein
MRNRREQPGGRRKARPDFEELLASIDIPEPFEIEAFCNKIAEQRERPLYLHSVPGISGTDAPCGIWIATDVADHVFHEAATTPLHRDHIILHEISHMLLGHSTIAEGAQSGSNSLFSGIDPATVISLLNRASYATEDERDAERLAGLIASKADISSPRRRVAHHQVLRRLGSALGDSYSD

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Crispr_ID: NZ_CP015726_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_15

9132407-9133874

Unclear

Consensus_repeat	Method
GTTGCGAACCCTCCAGGGCTGATGAGGAC	PILER-CR
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CRISPRCasFinder
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CRT

22 spacers

cas2,cas1,cas3,cas5,cas7,cas6

The CRISPR arrays of NZ_CP015726_15

>merge|NZ_CP015726|15|9132407-9133874|PILER-CR,CRISPRCasFinder,CRT
GTCCTCATCAGCCCTGGAGGGTTCGCAACATCACCAAGACGACCCCGCCGGTCCAGCTTGTGACGCGTCCTCATCAGCCCTGGAGGGTTCGCAACCAGGGGAACGGGACGGGGACGTGGCAGTACTCCGGTCCTCATCAGCCCTGGAGGGTTCGCAACACGATGACGACTTCGGCGAAGTGGTCCGAGAGGACGCGTCCTCATCAGCCCTGGAGGGTTCGCAACCCCGGGAGCGGAACGCCAACCGGCGCGCTGTCCTCGTGTCCTCATCAGCCCTGGAGGGTTCGCAACACGCCGACCAGGCCCACGAGTACGACGACGGCTACGGGTCCTCATCAGCCCTGGAGGGTTCGCAACAGACCATCCGCTACACAGCCGACGTCGTAGCCGTCACCCCGTCCTCATCAGCCCTGGAGGGTTCGCAACTGGACCAGGTGCTCGGCCGTGGCTACCGGGCGAGCGGGTCCTCATCAGCCCTGGAGGGTTCGCAACCCCTGGTCGTGGTCGCCCATGACTCCCTCGTCCTCGTCCTCATCAGCCCTGGAGGGTTCGCAACTCGGTGAGGGCGATGGAGACGAGACCGCGGTTGCTGGTCCTCATCAGCCCTGGAGGGTTCGCAACTGCGGGGCGAGCTGCCCGAGGGCGGTGGTCATCTGGTCCTCATCAGCCCTGGAGGGTTCGCAACCCAAGGGCGTGGGAGGCGCGGGGGGCGCGGGGGTCAGGTCCTCACCAGCCCTGGAGGGTTCGCAACCCGGTATCAGGATCTCCCAATCCAACCCCGGGTCAGCGCGTCCTCATCAGCCCTGGAGGGTTCGCAACGACATGGGCAGGTCTGGGTGCAGCATCGCGCCGGTGGTCCTCATCAGCCCTGGAGGGTTCGCAACGCCGGTCGTGGATCGCGCAGGACCCCGCGCGCGCGGTCCTCATCAGCCCTGGAGGGTTCGCAACAGGGTGGGGTCGATCCAGTCGCCGCAGAAGCAGCAGGTCCTCATCAGCCCTGGAGGGTTCGCAACACCTGCATGGAGCGGGTCGACAGGGCGTCGAGCAGCGTCCTCATCAGCCCTGGAGGGTTCGCAACAGCTTGCACAGGCCCGGGGTGGCGCCGAGGCGGAACGTCCTCATCAGCCCTGGAGGGTTCGCAACGCTGGGGAGGCGTGACGCGCGACGCGGGTACAGCCGTCCTCATCAGCCCTGGAGGGTTCGCAACCGCATACCGAGCTGGAGCACCGGGCCCCCGAGCCGGGTCCTCATCAGCCCTGGAGGGTTCGCAACGTGAGGTAGCAGGTGACGTACGACGGGGCTTCGTTGTCCTCATCAGCCCTGGAGGGTTCGCAACGGCGCGGTGAAGCCGTACGCCACGATGACGTCATTGCCCGTCCTCATCAGCCCTGGAGGGTTTGCAACGCGATCACGGTGACGGTGCGGCCGGGGCTGCGGCGGGTCCTCATCAGCCCTGGAGGGTTCGCAAC

>NZ_CP015726|15|3|9132407-9133874|PILER-CR
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ATCACCAAGACGACCCCGCCGGTCCAGCTTGTGACGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CAGGGGAACGGGACGGGGACGTGGCAGTACTCCG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACGATGACGACTTCGGCGAAGTGGTCCGAGAGGACGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCCGGGAGCGGAACGCCAACCGGCGCGCTGTCCTCGT
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACGCCGACCAGGCCCACGAGTACGACGACGGCTACGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGACCATCCGCTACACAGCCGACGTCGTAGCCGTCACCCC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TGGACCAGGTGCTCGGCCGTGGCTACCGGGCGAGCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCCTGGTCGTGGTCGCCCATGACTCCCTCGTCCTC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TCGGTGAGGGCGATGGAGACGAGACCGCGGTTGCTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TGCGGGGCGAGCTGCCCGAGGGCGGTGGTCATCTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCAAGGGCGTGGGAGGCGCGGGGGGCGCGGGGGTCAG
GTCCTCACCAGCCCTGGAGGGTTCGCAAC	CCGGTATCAGGATCTCCCAATCCAACCCCGGGTCAGCGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GACATGGGCAGGTCTGGGTGCAGCATCGCGCCGGTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GCCGGTCGTGGATCGCGCAGGACCCCGCGCGCGCG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGGGTGGGGTCGATCCAGTCGCCGCAGAAGCAGCAG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACCTGCATGGAGCGGGTCGACAGGGCGTCGAGCAGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGCTTGCACAGGCCCGGGGTGGCGCCGAGGCGGAAC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GCTGGGGAGGCGTGACGCGCGACGCGGGTACAGCC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CGCATACCGAGCTGGAGCACCGGGCCCCCGAGCCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GTGAGGTAGCAGGTGACGTACGACGGGGCTTCGTT
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GGCGCGGTGAAGCCGTACGCCACGATGACGTCATTGCCC
GTCCTCATCAGCCCTGGAGGGTTTGCAAC	GCGATCACGGTGACGGTGCGGCCGGGGCTGCGGCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC

>NZ_CP015726|15|14|9132407-9133874|CRISPRCasFinder
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ATCACCAAGACGACCCCGCCGGTCCAGCTTGTGACGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CAGGGGAACGGGACGGGGACGTGGCAGTACTCCG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACGATGACGACTTCGGCGAAGTGGTCCGAGAGGACGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCCGGGAGCGGAACGCCAACCGGCGCGCTGTCCTCGT
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACGCCGACCAGGCCCACGAGTACGACGACGGCTACGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGACCATCCGCTACACAGCCGACGTCGTAGCCGTCACCCC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TGGACCAGGTGCTCGGCCGTGGCTACCGGGCGAGCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCCTGGTCGTGGTCGCCCATGACTCCCTCGTCCTC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TCGGTGAGGGCGATGGAGACGAGACCGCGGTTGCTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TGCGGGGCGAGCTGCCCGAGGGCGGTGGTCATCTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCAAGGGCGTGGGAGGCGCGGGGGGCGCGGGGGTCAG
GTCCTCACCAGCCCTGGAGGGTTCGCAAC	CCGGTATCAGGATCTCCCAATCCAACCCCGGGTCAGCGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GACATGGGCAGGTCTGGGTGCAGCATCGCGCCGGTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GCCGGTCGTGGATCGCGCAGGACCCCGCGCGCGCG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGGGTGGGGTCGATCCAGTCGCCGCAGAAGCAGCAG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACCTGCATGGAGCGGGTCGACAGGGCGTCGAGCAGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGCTTGCACAGGCCCGGGGTGGCGCCGAGGCGGAAC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GCTGGGGAGGCGTGACGCGCGACGCGGGTACAGCC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CGCATACCGAGCTGGAGCACCGGGCCCCCGAGCCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GTGAGGTAGCAGGTGACGTACGACGGGGCTTCGTT
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GGCGCGGTGAAGCCGTACGCCACGATGACGTCATTGCCC
GTCCTCATCAGCCCTGGAGGGTTTGCAAC	GCGATCACGGTGACGGTGCGGCCGGGGCTGCGGCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC

>NZ_CP015726|15|2|9132407-9133874|CRT
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ATCACCAAGACGACCCCGCCGGTCCAGCTTGTGACGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CAGGGGAACGGGACGGGGACGTGGCAGTACTCCG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACGATGACGACTTCGGCGAAGTGGTCCGAGAGGACGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCCGGGAGCGGAACGCCAACCGGCGCGCTGTCCTCGT
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACGCCGACCAGGCCCACGAGTACGACGACGGCTACGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGACCATCCGCTACACAGCCGACGTCGTAGCCGTCACCCC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TGGACCAGGTGCTCGGCCGTGGCTACCGGGCGAGCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCCTGGTCGTGGTCGCCCATGACTCCCTCGTCCTC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TCGGTGAGGGCGATGGAGACGAGACCGCGGTTGCTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	TGCGGGGCGAGCTGCCCGAGGGCGGTGGTCATCTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CCAAGGGCGTGGGAGGCGCGGGGGGCGCGGGGGTCAG
GTCCTCACCAGCCCTGGAGGGTTCGCAAC	CCGGTATCAGGATCTCCCAATCCAACCCCGGGTCAGCGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GACATGGGCAGGTCTGGGTGCAGCATCGCGCCGGTG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GCCGGTCGTGGATCGCGCAGGACCCCGCGCGCGCG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGGGTGGGGTCGATCCAGTCGCCGCAGAAGCAGCAG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	ACCTGCATGGAGCGGGTCGACAGGGCGTCGAGCAGC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	AGCTTGCACAGGCCCGGGGTGGCGCCGAGGCGGAAC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GCTGGGGAGGCGTGACGCGCGACGCGGGTACAGCC
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	CGCATACCGAGCTGGAGCACCGGGCCCCCGAGCCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GTGAGGTAGCAGGTGACGTACGACGGGGCTTCGTT
GTCCTCATCAGCCCTGGAGGGTTCGCAAC	GGCGCGGTGAAGCCGTACGCCACGATGACGTCATTGCCC
GTCCTCATCAGCCCTGGAGGGTTTGCAAC	GCGATCACGGTGACGGTGCGGCCGGGGCTGCGGCGG
GTCCTCATCAGCCCTGGAGGGTTCGCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063729204.1\|9132043_9132307_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP015726.1\|WP_063728807.1\|9134062_9134641_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239488
NZ_CP015726.1\|WP_063728787.1\|9137612_9137801_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_079151810.1\|9128114_9130541_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP015726.1\|WP_063728808.1\|9131057_9132038_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP015726.1\|WP_063728809.1\|9127452_9128133_+\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|187824
NZ_CP015726.1\|WP_063728777.1\|9140191_9141037_+\|DUF2637-domain-containing-protein	unknown	unknown	gnl\|CDD\|378511
NZ_CP015726.1\|WP_063728802.1\|9136665_9137109_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224314
NZ_CP015726.1\|WP_159073479.1\|9134637_9135711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063729207.1\|9122388_9122937_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP015726.1\|WP_159073480.1\|9120817_9122428_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063728783.1\|9138844_9139552_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236153
NZ_CP015726.1\|WP_063728780.1\|9139640_9140195_+\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP015726.1\|WP_063728811.1\|9124946_9126395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063728810.1\|9126395_9127469_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP015726.1\|WP_159073478.1\|9135834_9136377_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063728812.1\|9124269_9124959_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP015726.1\|WP_063728775.1\|9141178_9141403_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063729203.1\|9141402_9142014_+\|plasmid-mobilization-relaxosome-protein-MobC	unknown	unknown	gnl\|CDD\|368576
NZ_CP015726.1\|WP_079151811.1\|9120037_9120526_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063729204.1\|9132043_9132307_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.98079e-22
NZ_CP015726.1\|WP_063728807.1\|9134062_9134641_-\|hypothetical-protein	gnl\|CDD\|239488	cd03394, PAP2_like_5, PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	0.000196268
NZ_CP015726.1\|WP_079151810.1\|9128114_9130541_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.99752e-43
NZ_CP015726.1\|WP_063728808.1\|9131057_9132038_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	5.23758e-135
NZ_CP015726.1\|WP_063728809.1\|9127452_9128133_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187824	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.95401e-17
NZ_CP015726.1\|WP_063728777.1\|9140191_9141037_+\|DUF2637-domain-containing-protein	gnl\|CDD\|378511	pfam10935, DUF2637, Protein of unknown function (DUF2637). This family of proteins has no known function.	0.00961463
NZ_CP015726.1\|WP_063728802.1\|9136665_9137109_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224314	COG1396, HipB, Predicted transcriptional regulators [Transcription].	0.00149963
NZ_CP015726.1\|WP_063729207.1\|9122388_9122937_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.25042e-05
NZ_CP015726.1\|WP_063728783.1\|9138844_9139552_+\|ATP-binding-protein	gnl\|CDD\|236153	PRK08116, PRK08116, hypothetical protein; Validated.	1.09518e-33
NZ_CP015726.1\|WP_063728780.1\|9139640_9140195_+\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	1.86457e-22
NZ_CP015726.1\|WP_063728810.1\|9126395_9127469_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.05083e-80
NZ_CP015726.1\|WP_063728812.1\|9124269_9124959_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.31221e-22
NZ_CP015726.1\|WP_063729203.1\|9141402_9142014_+\|plasmid-mobilization-relaxosome-protein-MobC	gnl\|CDD\|368576	pfam05713, MobC, Bacterial mobilisation protein (MobC). This family consists of several bacterial MobC-like, mobilisation proteins. MobC proteins belong to the group of relaxases. Together with MobA and MobB they bind to a single cis-active site of a mobilising plasmid, the origin of transfer (oriT) region. The absence of MobC has several different effects on oriT DNA. Site- and strand-specific nicking by MobA protein is severely reduced, accounting for the lower frequency of mobilisation. The localized DNA strand separation required for this nicking is less affected, but becomes more sensitive to the level of active DNA gyrase in the cell. In addition, strand separation is not efficiently extended through the region containing the nick site. These effects suggest a model in which MobC acts as a molecular wedge for the relaxosome-induced melting of oriT DNA. The effect of MobC on strand separation may be partially complemented by the helical distortion induced by supercoiling. However, MobC extends the melted region through the nick site, thus providing the single-stranded substrate required for cleavage by MobA.	6.78295e-06
NZ_CP015726.1\|WP_079151811.1\|9120037_9120526_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	2.04187e-18

>NZ_CP015726.1|WP_063729204.1|9132043_9132307_+|CRISPR-associated-endonuclease-Cas2
MFVILVYDTAVERNPKVLKTCRKYLLWTQRSVFQGELSTAQYRALMAALNTTIDPDYDSIVTYTARSPDMVESSTLGVALGGPGDIL
>NZ_CP015726.1|WP_063728808.1|9131057_9132038_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MPAVGRTYWLTEPCRIRREDNSVRIERPDGTPVRIPITDIRDLVTFDHVDINTSALSLLSRNGVTLHVLDHYGNHAGHFSPAESMSSASVVRRQVEITADPDQRLAVARSLVLATAENLRWALDTDLLDPALLSLRTALPDCKDSDEIMGQEGNFRRTGWTVLDTQLPAWLRLNGRTRRPPTNAGNAFISYLNTLVYARVLTALRSTPLHPAIGFLHSDTDRRRNTLALDLAEPFKPLFAERLLKRVASQKKLKPTDFETDVARASLSKDGRKKVAALVKEELATTVYHRMLKRKVSYEELIHLEALKIVRMCLEGKPYKPFRPWW
>NZ_CP015726.1|WP_079151810.1|9128114_9130541_+|CRISPR-associated-helicase/endonuclease-Cas3
MATDPLTPQARRRWLTDIRAKSTPVDDPERLTTHSRTVHDVVGQVEARVAAAGVLATEPAFWSRVRKAALLHDTGKIAEGFQQQLQPGGDFWGQRHEVLSLAYVDLLATAAGWSDEDRLMIATLVATHHRALHSSSSGVAGGKPPLAQTYNSHTRWDEAFTRTPLSGGDQVQVTRGLHQELVAWLAGFLAVDPPFATSGEATLADRARALLEHLLAAWQLPVKEHQGLLAVLAQGALTLADHVGSAHERLQTHMPLPADYLDRFPYAPYPHQQQAAATDGHLILIAPTGSGKTEAGLAWAARQLTTMPGLPRLVWTLPYRASLNAARERFRHSLVPAPGDQKADIGLLHGTIAHTLLTQALEDDCAAGPGADRREATVGQARRARARAGAMRLFAQRLRVATPHQLLRGAIAGPAYSSVLLEQTNSLFVLDELHAYEPETFGRLCAAMGLWERLGSRIAVLSATLAPPMITLIDESVTQRVACHRAPQGTSPVRHRLVVDDTPLTDPESVDRLRSWLRDGHSVLAVANTVARAQGLFDELADEAGEAAPSDPHAALLLHSRFKNRDRAAIEKHLLARHPERRLVDPAGRGGLVVATQTVEVSLQLDFDRGAVELAPVEAVAQRAGRVNRRGRHPDGPVEFRVHHTPRFRPYDTGAMDAAWQALTTLVEEGTDTLSEQDIDRLLALAYETEWGKKWAEAARRARDGFAADFLTFTDPFHDRSEFARTLSEQFDSVEVIHRDDVEEYARLTTGGKSEHFLLAAGLLIPLRYSQLPTYRGQYDRRLGVHVIDGEYDETTGLKPPQEPETIL
>NZ_CP015726.1|WP_063728809.1|9127452_9128133_+|CRISPR-associated-protein-Cas5
MSVKREPQPAWRAEFWAPVASFRDPLFPGLSHGLPVPPPSTVRGLLAAATGESAESLALGMAAWSEGSGVDAETYHPISADGSNPAVSGRVRAVKGGMTIRDRPFLAHVYLTVWLPGSDGDRIAGALRRPVWPMRLGRSQDVVHPLDLRRTTLHPADEATVDHALAPAGGHDVPSATVHRMAASVSTDRLNTSWADYLWCDAATGSYPVRNAYQDDQGQAVWLLTP
>NZ_CP015726.1|WP_063728810.1|9126395_9127469_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAYLAGKMVLAVEAGAPNNGKGEETKARVKFARIRGRHYPYISAQAVRRWTRDGMVELGAVPSPVTRVGKAQNKAQKANTQADPVRYADDDLFGYMKAGAKKDDAATTLRDSPFMLGTLMSVEPAYPTEDFGVMSRGVTEPVLHGHEFYTADLAAPFLLDLPRIGTFTLPDANGVGRPNYLTQEQALAVADAAAAGATSVRFRDQPAVRLPIEERRNRAALLLEALAHLSGGAKQALHYGDRVPALVVMVPFKGGINPLAHCVDGQEGTGLRVRGEVLRKELKAWEGEWEAPVRIGWRPGFRDDLREDFEKECATELAEGTIVIDHPRTILRGLAAELREGQLDGWFDDPTRDVREA
>NZ_CP015726.1|WP_063728811.1|9124946_9126395_+|hypothetical-protein
MDPVSASTTAAAPLSATSHPLQRAGAWAVAVLGGRETPQEITEADLDAVASRLVGDVSTAAVAAKETAAYDWWKVLFALYPNSKATHSKRPRDKATLREALAELFVTDDLHKPAHPCTFCGTPAAVVWAKSTLPMFDTNKALNTLPPGIAGWPVCRGCRIAAWALPYGAWITAGSATVLSCEEEAAERAFAARNVRRARQIMHLGFDGLVAGARAELVAVRAMRSLRTGLPAAATLWSFKNDNQEPWLRVTRTRRAVPVFLATVEGNAELSRGWRLLELVLARHDKNGQLLASGAGEAARLLFEAEDGRSRSLLRQLHYLLHASERHWSTRNRAALTRLAFTYAKEILGMNPDLKPVATVVADWIEHGSGNPRGRLAEYRNVALSDYKLGTLLMQAHFRLTLDGRPVVASPEDWRPLIQQRPRAWEQRMLLAATVLQILQERGVAVSEARAAEPDEEARTERLLEQPLLGLDDDDDDEMGAV
>NZ_CP015726.1|WP_063728812.1|9124269_9124959_+|CRISPR-associated-endoribonuclease-Cas6
MRIRVDVDTDTPSLRWEDVHGPARAVMYELLGSQDTVLARTLHDEGWKGQPLKPLGLTSPQFKGAPKKNGVYTTSSDGSVWFGSPVPEIAATLVASLASRTEIVWGSARLKVRGFNIDIGSEASDGLVELSTATPVVVKKESRYLLPGESHYLERLQHNLAHKADVLGLPAPQGLRVLEAGPRRRFTVRGAPRIGAQVRVAMEADARFVEALRSWGLGLDTVQGFGWIR
>NZ_CP015726.1|WP_063729207.1|9122388_9122937_-|GNAT-family-N-acetyltransferase
MNTVSLTHHDGEDATALLEELCDAYADAYGAEPGEEKTSAFRRRAKKQLTRPGFTLVVARDEGRLVGFVFGYTLAAGDTHWWGGVQPEPSAEFLEETGSRTWVLSEIEVRRAWQGKGVGRTLHDAVLGARGEERATLATGPDAPAQKVYTGWGWQLVGRIPGDDGDYYSAYDLFVLELPVSR
>NZ_CP015726.1|WP_159073480.1|9120817_9122428_+|hypothetical-protein
MGAQPRSRRQEQVQFATELRAAGKTWSEVSTAIRRRYRVNARVAPRLARGLSQREVAELWNQRWPDDPRTFKNISTWELWPASTGHAPSLDTLNRLAQLYECAVPDLLADLPDHGPTPPEPSPVSGSTVAAAGAAPASGADFPDGLVAEPLMLPPQMAGTLVHRLHDLRFDELAQALIMWAQQANPGLNRRELLQKFSTALTVAAASPLLDIADADERDRVAAVLDEPSRLDLATIDHSERVLQHYRRQGDILGPQIALQTAMAQRQVTADLVTSAPAALRPRVLTVYAELSQMVGWQLYNLGDYRAAQYYYDDARTAAHDAENTELVTYVLCTMSQLATWQNKPRVGIDHAIAAQTWADQVDSPAARGYAADVAARAFAAAKQPDKAQRALEQEHAAVRDISVDAPAASWWYFFNESFYWGTEAECALTLGTPAKALSAARTSLPMIDPTNVHNHAHTLALQSQAHLQQGDIAEASAIVGDIARISSFNRSPRITERIADLRTALTPWQRSRAVRKLDDLLVHYRLTGSSSTNKS
>NZ_CP015726.1|WP_079151811.1|9120037_9120526_-|ATP-binding-protein
MALTGLGEVPCTRRLDHSETGQPVTHTGTVRIERTSQPGSELTDEDRAWPGRIRRIARAYLRNWDLASYTDRVELLLTELVTNALRHGRYEEIGVRLFHTSSQLCVEVADGSPGCPVRREAGPDDEYGRGIVLVEAYADDWGVTDDNTVTWCTLNLTAQDAS
>NZ_CP015726.1|WP_063728807.1|9134062_9134641_-|hypothetical-protein
MTSSRTARIITDTLAPANLVIAVLLIIGWHSTDSLTGLGWGLLAALFCGGIPFAIIMLGVKRGNWTDKHIRHRHQRAIPLLATMASVLTGIGLLVALDGPREVLALVLAMLAGLTLTITVTVWWKVSVHTAVASGVAVVLLIAYGLYMAPLFAGVALIGWSRVALRDHTPAQTVVGAFVGGLAAAVVFSLMR
>NZ_CP015726.1|WP_159073479.1|9134637_9135711_-|hypothetical-protein
MTIRPVKVASSVDTLVHIPNFAALIKHLSGLGATHAVLVFVHTMSEQSTAGLKARRSHVAVPIAAGFIISALFFATPQRREATDLLTEYAADGRIATYGVLWTTMLGMALISATALCWRWGRQPDTGLLGHGLRLTGIGTTIGMAYAVHRIAMVTLRYLGYAPISPRTDQGISSLLLGSALIFIMFGSTLPALPRLLRWWRDYRDLLRLYPLWHSLTEVVPSVRLDPPRGITAERLTLRHTHQRLYRRNIEIRDAILDLRNRTSGALRDQAIAHVTSRGLTGAYADIAAEACWLAAVKDSRFRGKPTRGEHHPPASGGRDLASEIPALKALAAAYHSDLASDFTAQCTSARPPETNA
>NZ_CP015726.1|WP_159073478.1|9135834_9136377_-|hypothetical-protein
MRNRREQPGGRRKARPDFEELLASIDIPEPFEIEAFCNKIAEQRERPLYLHSVPGISGTDAPCGIWIATDVADHVFHEAATTPLHRDHIILHEISHMLLGHSTIAEGAQSGSNSLFSGIDPATVISLLNRASYATEDERDAERLAGLIASKADISSPRRRVAHHQVLRRLGSALGDSYSD
>NZ_CP015726.1|WP_063728802.1|9136665_9137109_-|helix-turn-helix-transcriptional-regulator
MSERAPEEPLTLAQKIDHLFKTVHPKNRGPYSHEEVASAIKKSGGPTISASYIWQLRTGGKDNPTMKHLEALAGFFGVSPAYFFDDESSKRIAAELSMLASMRDNRVREVALRANGLSGETLDLLQGFIERARALEGLRDGDNPPTD
>NZ_CP015726.1|WP_063728787.1|9137612_9137801_+|hypothetical-protein
MPAYDSGRLPLANAGGRYRRLAAVRADMAPQVATFEATLHDTVTPCVQPHLRPAAAIAERGC
>NZ_CP015726.1|WP_063728783.1|9138844_9139552_+|ATP-binding-protein
MRDTDAQPIGGIARRLTGILKARGIDPSTPVSEDAEPSPALAAAQARIPARYQNAVADHPTVAAWVQEIAAAGRRGPHGSVGIAEGRSLLIVGTTGTGKTHQAYGAVRSLLAAGVRLRWKATTAADLYAELRPRKDSDGERELQDLARCPLLIIDDLGAAKASEWTEEITMRLIDRRYTAMLPTLVTTNLGMADLRAHIGDRVASRLTEMTDKVILDGPDRRRAIAAERRGLAAA
>NZ_CP015726.1|WP_063728780.1|9139640_9140195_+|WhiB-family-transcriptional-regulator
MHRTLFTEPRTLGDHTWHDQATCLSTPANPVDPEIFFPEPEEMDRIRAAKTLCAQCPVRQTCLDAALEAGDRHGIRGGMTEEEREPLHRNLPHRLDYARVNATLAGRDIHLTEAERRAVTRAAYQDGVPAERLAWLLKITDEHAGKLYRQVRRELRNRSVDNQSRGQSFAAVPSTHHRDLGTAA
>NZ_CP015726.1|WP_063728777.1|9140191_9141037_+|DUF2637-domain-containing-protein
MTDTKVTQVRITGWDRAAIITLGAAGCALSYDALQQMAVAIHVRGPLTWLFPLVIDGFIGYGVRALLVMRSASLASRCYVWALFGTATAASIWANALHAVRLNDQSGAGALRLGDVTVGVLSTLAPLALAGAVHLYILIARRAVEPGHPHLADTADTRSGHAAGEGEGAVRSVTGHRLSRVSGGHGDRPVEARPVTTAEAASEAPMNADPGDAPARPAHSGYEGDLLPVARRAVADAGKLTRKVVADAIRGQDIPLSNDRLTELMQQLRAEAGSRPRCSTA
>NZ_CP015726.1|WP_063728775.1|9141178_9141403_+|hypothetical-protein
MRSTPPSTDEIDVWLTVLRDHGHLHCARHTPEGIWTVQRTPTSVPHTLHHPVLALGYIAGILRDIRLESGDAAR
>NZ_CP015726.1|WP_063729203.1|9141402_9142014_+|plasmid-mobilization-relaxosome-protein-MobC
MTSDPATQGHSDDHVARGRASYTLRNSLAGQAAEGVSQGHAPAPGGAGEVRHQGAPDQAATEDGSQPDGNEPLSDIETRMRPRLRQSQQRDCVRSVRLTTDELADVQRAATTMGMRVAGFLADAAVAVARVQDGPHSWLMDQRTVVEELMRASAQLARVGNNLNQVAKVLNSGGDAPYAGDAIARVLRAAARVEAAATEIAKR

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Crispr_ID: NZ_CP015726_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_16

9697371-9697476

Orphan

Consensus_repeat	Method
AGCCGGAGCGGCGCGAGACGCCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_16

>merge|NZ_CP015726|16|9697371-9697476|CRISPRCasFinder
AGCCGGAGCGGCGCGAGACGCCGCGTGAGCCGGAGCGGGCCGGGAAGTCCGAGCAGCCTCAGCGGGCTGAGCGGGCCGAGCAGCCGGAGCGGCGCGAGACGCCGCG

>NZ_CP015726|16|15|9697371-9697476|CRISPRCasFinder
AGCCGGAGCGGCGCGAGACGCCGCG	TGAGCCGGAGCGGGCCGGGAAGTCCGAGCAGCCTCAGCGGGCTGAGCGGGCCGAGC
AGCCGGAGCGGCGCGAGACGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_063737173.1\|9696081_9697011_+\|DUF881-domain-containing-protein	unknown	unknown	gnl\|CDD\|377575
NZ_CP015726.1\|WP_063733448.1\|9681616_9682354_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP015726.1\|WP_009713197.1\|9707957_9708545_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063737207.1\|9693459_9695955_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|100097
NZ_CP015726.1\|WP_078510249.1\|9707481_9707745_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_079152653.1\|9710529_9712356_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238733
NZ_CP015726.1\|WP_009713211.1\|9686479_9686929_-\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376324
NZ_CP015726.1\|WP_063737177.1\|9704507_9707405_+\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP015726.1\|WP_063733062.1\|9680768_9681539_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP015726.1\|WP_063733059.1\|9684713_9686384_-\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP015726.1\|WP_107451105.1\|9682394_9683651_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|234819
NZ_CP015726.1\|WP_014058688.1\|9697007_9697340_+\|small-basic-family-protein	unknown	unknown	gnl\|CDD\|377739
NZ_CP015726.1\|WP_079152652.1\|9702283_9703780_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235118
NZ_CP015726.1\|WP_009713203.1\|9700954_9701428_+\|bifunctional-nuclease-family-protein	unknown	unknown	gnl\|CDD\|376830
NZ_CP015726.1\|WP_009713202.1\|9701596_9702223_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133380
NZ_CP015726.1\|WP_063631639.1\|9698403_9699123_+\|DUF881-domain-containing-protein	unknown	unknown	gnl\|CDD\|377575
NZ_CP015726.1\|WP_063737174.1\|9700131_9700902_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP015726.1\|WP_079152649.1\|9703769_9704138_-\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|368352
NZ_CP015726.1\|WP_009713209.1\|9692741_9693350_+\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP015726.1\|WP_063733060.1\|9683727_9684642_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_063737173.1\|9696081_9697011_+\|DUF881-domain-containing-protein	gnl\|CDD\|377575	pfam05949, DUF881, Bacterial protein of unknown function (DUF881). This family consists of a series of hypothetical bacterial proteins. One of the family members YlxW from Bacillus subtilis is thought to be involved in cell division and sporulation.	2.22141e-41
NZ_CP015726.1\|WP_063733448.1\|9681616_9682354_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.61039e-126
NZ_CP015726.1\|WP_063737207.1\|9693459_9695955_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|100097	cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	4.78391e-177
NZ_CP015726.1\|WP_079152653.1\|9710529_9712356_-\|VWA-domain-containing-protein	gnl\|CDD\|238733	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the members of this subgroup. All members of this subgroup however have a conserved MIDAS motif. .	5.46754e-33
NZ_CP015726.1\|WP_009713211.1\|9686479_9686929_-\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|376324	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.	1.68903e-43
NZ_CP015726.1\|WP_063737177.1\|9704507_9707405_+\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP015726.1\|WP_063733062.1\|9680768_9681539_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	5.45263e-66
NZ_CP015726.1\|WP_063733059.1\|9684713_9686384_-\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	6.86064e-177
NZ_CP015726.1\|WP_107451105.1\|9682394_9683651_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|234819	PRK00711, PRK00711, D-amino acid dehydrogenase.	1.00879e-51
NZ_CP015726.1\|WP_014058688.1\|9697007_9697340_+\|small-basic-family-protein	gnl\|CDD\|377739	pfam06947, DUF1290, Protein of unknown function (DUF1290). This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown.	3.66225e-33
NZ_CP015726.1\|WP_079152652.1\|9702283_9703780_+\|DNA-polymerase-IV	gnl\|CDD\|235118	PRK03348, PRK03348, DNA polymerase IV; Provisional.	0
NZ_CP015726.1\|WP_009713203.1\|9700954_9701428_+\|bifunctional-nuclease-family-protein	gnl\|CDD\|376830	pfam02577, DNase-RNase, Bifunctional nuclease. This family is a bifunctional nuclease, with both DNase and RNase activity. It forms a wedge-shaped dimer, with each monomer being triangular in shape. A large groove at the thick end of the wedge contains a possible active site.	3.28816e-62
NZ_CP015726.1\|WP_009713202.1\|9701596_9702223_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	2.51322e-19
NZ_CP015726.1\|WP_063631639.1\|9698403_9699123_+\|DUF881-domain-containing-protein	gnl\|CDD\|377575	pfam05949, DUF881, Bacterial protein of unknown function (DUF881). This family consists of a series of hypothetical bacterial proteins. One of the family members YlxW from Bacillus subtilis is thought to be involved in cell division and sporulation.	4.08483e-44
NZ_CP015726.1\|WP_063737174.1\|9700131_9700902_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.70418e-19
NZ_CP015726.1\|WP_009713209.1\|9692741_9693350_+\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	2.12984e-23
NZ_CP015726.1\|WP_079152649.1\|9703769_9704138_-\|PRC-barrel-domain-containing-protein	gnl\|CDD\|368352	pfam05239, PRC, PRC-barrel domain. The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain.	1.078e-09

>NZ_CP015726.1|WP_014058688.1|9697007_9697340_+|small-basic-family-protein
MIAVLGLIVGVVVGLVVRPVVPTVVEPYLPIAVVAALDAVFGGFRAMLDGIFDDKVFVVSFLSNVVVAALIVFLGDKLGVGAQLSTGVVVVLGIRIFSNAAAIRRHVFRA
>NZ_CP015726.1|WP_063737173.1|9696081_9697011_+|DUF881-domain-containing-protein
MSQQPPVRSTDTSSPRPRLDASMSLLTNVMDHSLDDGYAEAAARRGETGRSRLPRTLRGRLTMALGLVMVAVVVTIGAAEARISAPTLAKERGELIDRIESGNAKADGLTKSVDKLRGDVGEKQRQALEKHGGAKGDLVALLSGATEVSGPGVKLMVDDAKESTSGGGGGPRESNDFSDTGRVRDHDMQRVVNGLWESGAEAVAINGQRLTALSAIRAAGDAILVDNKPLAPPYTVLAVGDGQRLSTAFQDSADGQYLHVLQENYDIRTSISAQDTVRLPAAPSLIVRSAEPIVGGAGKGGTETGKGTS
>NZ_CP015726.1|WP_063737207.1|9693459_9695955_+|NTP-transferase-domain-containing-protein
MKAVVMAGGEGTRLRPMTATMPKPLLPVANRPIMEHVLRLLKRHGLSETVVTVQFLASLVKNYFGDGEELGMELTYANEEKPLGTAGSVKNAEEALKDDAFLVISGDALTDFDLTELINFHKEKGALVTVCLTRVPNPLEFGITIVDEAGQVERFLEKPTWGQVFSDTVNTGIYVMEPEVFDYVEPDVPVDWSGDVFPQLMKEGKPIFGYIAEGYWEDVGTHESYVKAQADVLEGKVEVELDGFEISPGVWVAEGAEVHPESVLRGPLYIGDYAKVEAGAEIREHTVVGSNVVVKSGAFLHKAVIHDNVYVGQQSNLRGCVIGKNTDIMRASRIEDGAVIGDECLIGEESIVQGNVRVYPFKTIEAGAFVNTSVIWESRGQAHLFGARGVSGILNVEITPELAVRLAGAYATTLKKGSTVTTARDHSRGARALKRAMISALQTSAIDVRDLENVPLPVARQQTARGSAGGIMIRTSPGVPDSVDIMFFDERGADLSAGGQRKLDRVYARQEYRRAFPGEIGDLSFPSSVYDSYTGSLLRSTDVSGIAESGLKVVVDAANGSAGLVLPSLLGRLGVDALTINPGLNESRPTETADGRRSGLARLGEIVASARAAFGVRFDPVGERFSLVDERGRIVEDDRALLVMLDLVAAERRSGRVALPVTTTRIAEQVAAYHGTQVEWTTTAADDLTRVARSETTIFGGDGRGGFIVPEFSSVFDGTAAFVRLIGLVARTQLTLSQIDARIPRAHVQRRDLATPWAVKGLVMRHVVEAAGDRSVDTTDGVRVVEADGRWVMVLPDPAEAVTHLWAEGPDDASAQALLDEWAGVVDSAGR
>NZ_CP015726.1|WP_009713209.1|9692741_9693350_+|CDP-alcohol-phosphatidyltransferase-family-protein
MEVQETRVQTDRVLTIPNILSTARLFGVPLFLWLILRPEFGGPKSDLWALLVLALSGVSDYLDGMLARRWNQISSLGRLLDPAADRLYILSTLIGLTWRDILPLWLPVVLLAREVVLVAMVWILRRHGYPPPQVNFLGKAATFNLMYAFPLLLLSDGSGPLHTTAAIFGWAFAGWGTTLYWWAGVLYVVQVRRLVKADAAAD
>NZ_CP015726.1|WP_009713211.1|9686479_9686929_-|PTS-glucose-transporter-subunit-IIA
MTTVTSPLAGRAIGLTAVPDPVFSGAMVGPGTAIDPVLEPSVAVAPVDGIVVSLHPHAFVVVDEEGHGVLTHLGIDTVQLNGDGFEVLINKGDTVKRGDAIVRWDPAVAVAAGKSPICPIVALEATADSLSAVREDGDVKPGDTLFSWT
>NZ_CP015726.1|WP_063733059.1|9684713_9686384_-|phosphoenolpyruvate--protein-phosphotransferase
METTLRGVGVSHGVAIGEVRHMGTAVLEPPAKQIPADEAPREQGRARQAVEAVSADLIARGNLAGGEAQAVLEAQAMMAQDPELIADVERRITVGSTAERAVYDAFAAYRALLAGAGEYLAGRVADLDDVRNRIVARLLGVPMPGVPDSDEPYVLIARDLAPADTALLDPTLVLGFVTEEGGPTSHSAILARALGVPAVVALPGAGELIEGTMIAVDGSTGEIFVSPNEEKRAELTRAAEERRAALAASSGPGATSDGHKVPLLANVGGPADVPAAVEAGAEGVGLFRTEFLFLDDSTKAPSEEKQADAYRQVLEAFPEGRVVVRVLDAGADKPLDFLTPSDEPNPALGVRGLRTLLDHPDVLRTQLTALAKAAEGLPVYLEVMAPMVADRLDAKAFADACREAGLQAKFGAMVEIPSAALRARSILQEVEFLSLGTNDLAQYTFAADRQVGAVSRLQDPWQPALLDLVAASAEAAQAEGKSCGVCGEAASDPLLACVLTGLGVTSLSMGAASIPYVRATLAKHTLAQCERAASAARAADTAEDARRAAQAVLSGE
>NZ_CP015726.1|WP_063733060.1|9683727_9684642_+|hypothetical-protein
MAHTDKGGTHCGKPTAIRALRREVPSVVALLAAEDDFAAMRAYTSFAFDDHPRYLRRMEALLRALTSQGVHTTVALFDPVAYEEYCAHTRLDPDTPASRSRYTAEVASTGATVVYEGQPIDQLLPRLIALAEERATWEYASAVLARAGDCGGCGCGDGTGRAAFDRAAAALRAVLDAAGPGLHHLVCSVPVDGTPLAAAVHATVRRPAAPPTLAEPGALVFRTVLACGIATGSPGGIVLRTSLPGAPDTVRGWALRDGWPRPLSEAEVFTAYCTDARTGEPIPPEHGVEYRAGLPLPRSEGEAG
>NZ_CP015726.1|WP_107451105.1|9682394_9683651_+|FAD-dependent-oxidoreductase
MVVGGGVVGLCTAYYLAERGLPVEIVERRGVGSGVSRGNAGWVCLSHSTPVPAPGVLRYAARSLGRPDSPLYLRPLPDPAFVRWLWRFWRSSTPAAFRRGYAAIAELNRSTFALFDGLREAGVETTLSRPGMVHAFLSPGEARHHLQLQRQMADGRYPLPDDVSTGAEAMALDPSLAPEVKAAYLVPGEGVLDPVAFARALEERLAATGVKVHENVAATGFRRGPSGDRVTAVVTDTGEIPCSAVVIAAGVRSADLLRELGHPLPLQAGKGYSFSVDLDPAPTHTLYFGEHRAVASPIGGTTRIAGTMELSGNNNRLDWRRIVAVARASRHYLGQWFDDPDDLVALIRDPWVGGRPFLPDGLPVIDRVPGPGNAFTATGHGMLGVTLGPVTGSELAAYLVTGRRPAALTPFRFDRLRG
>NZ_CP015726.1|WP_063733448.1|9681616_9682354_+|amino-acid-ABC-transporter-ATP-binding-protein
MRIRDLGKSFDGRRVLDDVSLDVPRGRIVSVIGQSGGGKTTLLRCVNLLERPDTGTIEVAGETVHSDGRTVCRDLARLRRTVGMVFQRFHLFPHLTAVENVMLAQVKAGVPERQALERAVVLLRRVGLAHRGLAHPDQMSGGEQQRVAIARALALKPEVLLFDEPTSSLDPEATREVLRVMRELAEEGMTMMLVTHELPFAREVSDWVAFVDGGRIIEAGPPAEVLGRPQQARTRAFLTTYESAE
>NZ_CP015726.1|WP_063733062.1|9680768_9681539_+|amino-acid-ABC-transporter-permease
MTTAAGLFQVPWSDYRSDLLDALLKTVSYTAVSFAGAALLGLVVALLRLSRVWPLRALAAVYTELFKNIPLLAIIFLTYFGLGSVDIRLDVFTAGCLSLIVFYSAYLSEIFRAAISGIHDGQTEAGEALGLGRLSVFGHVIFPQALRLALPGTNTMLVDLLKGTSLLVTISAAELMSEARLITSSTFRALEVYLVISAVYFALCYPLSQLLLALERAIRAGKPLTPRRRRRLRTARALLAEAPAPAGTPSPKEATA
>NZ_CP015726.1|WP_063631639.1|9698403_9699123_+|DUF881-domain-containing-protein
MTGRQRLLKGVWPPRVTRAQLIVAVLLFGLGLGLAIQVRSTNENSVLRGARQEDLVRILDELDSRTQRLQDEKRRLENQRTELENSSDQAEEARKQTLQKEQQLGVLAGTVAAQGPGITITIDDSQGSVEADMLLDTVQELRAAGAEAIQIGKVRVVANSYFSDAGGSVEIDGRKVTQPYVVKVIGKPEDLEPALNIPGGVVQSLEKEQATVSVRQEKKIVVDALRSGKRPDYARSSSR
>NZ_CP015726.1|WP_063737174.1|9700131_9700902_+|MerR-family-transcriptional-regulator
MLQTPSGGAGTGTAPAGGPGGRSMSIGTVLNLLRDEFPEVTISKIRFLESEGLVEPRRTPSGYRKFSQEDVERLALILRMQRDHYLPLKVIREHLEALERGERPQLPAVSAGARPHELLEPGIDQGAVAPESPTVARVGRAELLASAQVSEAELADWESYGLIVHDDGGGYDVEAVTVARLLAELGRFGLEPRHLRIMKAAAEREAGLVEQVVAPLRLHRNPQTRAHAEASARELATLSVRLHAALVQSALRAAAH
>NZ_CP015726.1|WP_009713203.1|9700954_9701428_+|bifunctional-nuclease-family-protein
MNELDVVGVRVEMPSNQPIVLLREVGGDRYLPIWIGPGEATAIAFAQQGMAPARPLTHDLFKDVLEAVGQTLTEVRITDLREGVFYAELVFASGVEVSARPSDAIALALRTGTPIYGSDGVLDDAGIAIPDEQEDEVEKFREFLDQISPEDFGSSSQ
>NZ_CP015726.1|WP_009713202.1|9701596_9702223_+|MerR-family-transcriptional-regulator
MRSTGDGTAAGGPYALQGSAPADPALKARVAAQPTAPREPAAGGTETVGYRGPTACAAAGITYRQLDYWARTGLVEPSVRPAYGSGSQRLYSFRDVVVLKIVKRLLDTGVSLQNIRAAVQHLRTRGLDDLAQMTLMSDGATVYECTSPDEVVDLLQGGQGVFGIAVGVVWRDVESALSQLHGERVDTGETLVGHNPADELARRRNRAG
>NZ_CP015726.1|WP_079152652.1|9702283_9703780_+|DNA-polymerase-IV
MRGAPTILHLDMDAFYASAEQAAKPSLRGKPVIVGGLGPRGVVATASYEARVFGVHSAMAMAQARRLCPNAAYLTPRFSLYRQVSDQVMGLLRTLSPLVEPLSLDEAFVDLEAGGTEARVAVARAVAERLRADIRAVTGLTGSVGLAGSKMLAKIASEQAKPDGLTVIEPGTERELLDPMPVRTLPGVGPATAEALRRVGIHTVAETREAGEAELVRLLGRAHGASLYLMASGRDERPVVAERDAKSISVEDTFDVDVTDRTRVQLEVARLADRCVRRLREAGRSGRTVVIKVRRYDFSTLTRSETLRGPTDDPGVVREAAARLIDGVDTTAGVRLLGVGVSGLADYTQEDLFAQAAQAAEAAQAAEAAQAAHGAVEDPERGSGAEVPEPEGPGAPEAAEGSGRPQVWLPGADVRHAEYGEGWVQGSGVGRVTVRFEVPWSGPGRVRTFAVDDPELEPGEPLPLVRPPESAEPPESAEPPDPPEPAEPAEHPAGTLSR
>NZ_CP015726.1|WP_079152649.1|9703769_9704138_-|PRC-barrel-domain-containing-protein
MWLLVGITGSSPPVGESVQTDIDPRTLIGRKAFDREGAKIGTVDEVYLDDATGEPEWAAVRTGLFSRDVFVPLEPSEVVGDTLRVPYDRALIKDAPDLGVGRHLSPEQELQLYHHYGLDVTG
>NZ_CP015726.1|WP_063737177.1|9704507_9707405_+|aminomethyl-transferring-glycine-dehydrogenase
MTTHRISLAELERGTPFEQRHIGPDAGAQAKMLAQVGFGSLDELTAAAVPEVIKSAEALQLPPARSEAEVLAELRALADRNQVLPSMIGLGYYGTFTPPVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQTVVADLTGLDTAGSSLLDEATAAAEAMALSRRVGKVKEGVFLVDADCLPQTIAVIETRAEPTGVEVVVADLTDGIPDEIAERGVFGVLLQYPGASGAVRDPRPVIERAHELGAIVTVAADLLALTLLTSPGDLGADIAVGSTQRFGVPMGFGGPHAGFMSVRAAHARSLPGRLVGVSVDADGDKAYRLALQTREQHIRREKATSNICTAQVLLAVMAGMYAVYHGPDGLAGIARRTHRYATVLAEGLRAGGVELVHGAFFDTLTARVPGKAADVVAAAREAGVNLRLTDADHVGIACDETTGRAQLAAVWSAFGVDGGDGSGIDELDAATADALPAELLRSDTYLTHPVFHQYRSETAMLRYLRRLADRDYALDRGMIPLGSCTMKLNATTEMEPVTWPEFGALHPFAPVEQAHGYLTLIRELEERLADVTGYDKVSLQPNAGSQGELSGLLAVRAYHRANGEPQRTVCLIPSSAHGTNAASAVMAGMKVVVVKTGEDGEVDAADLRAKIEQYGEQLAVLMVTYPSTHGVFEEHITEICAAVHDAGGQVYVDGANLNALVGLAEPGRFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVREHLAPYLPNHPLQPAAGPATGVGPVSAAPWGSAGILPISWAYIRLMGAEGLRRATQAAVLGANYIAKRLEPHYQVLYTGPGGLVAHECVVDLRPLTKATGVTVDDVAKRLIDYGFHAPTMSFPVAGTLMIEPTESEDLAELDRFCEAMIAIRAEIDKVGSGEWTKDDNPLRNAPHTAATLSGSWDHPYTREEAVFPAGVSAADKYWPPVRRVDGAFGDRNLVCSCPPMESYEN
>NZ_CP015726.1|WP_078510249.1|9707481_9707745_-|hypothetical-protein
MNAAASSRTYTSPQRKNLAMCQHQPPCPSADSADREAAHLVAHHPEQGWSLLCNGVLLFEDTGELLPDGRIIAPCRPLATEHVVTAA
>NZ_CP015726.1|WP_009713197.1|9707957_9708545_-|hypothetical-protein
MPLLVPPAPAPALRSVLTALGSPTAVREVRTPALSSLPGPFEPELPLPVHVLDDITTPAGPPQVRLTGWRFMLRDGNRTVAAAEARLTADGWAFSHFSEGPYVASAELALRQAESLPSAYQPRLLSIPELYMVALWLHGDPAADAAEGGIEAGDLLVPLAPAPPGIAAHHPHPAADLLPVLTHRLTSAPLLGTPA
>NZ_CP015726.1|WP_079152653.1|9710529_9712356_-|VWA-domain-containing-protein
MDRADHTDHTDHTDHTDRADHTGRIDHSAPDNTGSRPGASSRRRTVAISTALVLAVATGAVVVLRGGLLPSAESCLSDAVRLSVAASPDVAPALRSVADHARRAGIRSDGRCLDVKVTSRPAYEVAGALGDAGRTPGFQVWVPDSSVWVERAATSPVSAAPLDTLGGIASSPVAVAATSTAADRLGWPDKTYDWAQLAAAGSGGGSPRLGTADPARSATGLLALARINGSIAKAGSADGKAATDTRAAANAKLLSQRATRTDTALLKTVPRRNQAVVLSEQAAFAHNAEADDDSRLDLFYPKDGTAELDYPYTVLNDRELTTVRARAATRFLTLLTDARGRRALKKDGFRTADGKVSEPVAQAAGGRTPQPYAVTPSPGPSAREVEAALGMWTITVQSARLNTVVDASASMSDPVPGRPGESRMDVTKASLRQALSRFNAGDEIGLWEFSTELDGDRDYRELVATRRLGARTPDGTGQRAELAAAFDALKPLPEGSTGLYDTTLAAYKKAQETFVRGKFNAVVMLTDGANQDPGSISRGALVKELKRLVDPDRPVPLIAIAVGPDADRAACREIAQATGGSAQQVNDPAQINTAMLKAIVAAGEAGAG

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Crispr_ID: NZ_CP015726_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015726_17

10625665-10625752

Orphan

Consensus_repeat	Method
TCCCCCAGCTACCGCTGGGAGGTGCCCCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015726_17

>merge|NZ_CP015726|17|10625665-10625752|CRISPRCasFinder
TCCCCCAGCTACCGCTGGGAGGTGCCCCCTGCGCTCTCCTCACGCGGGTTGCGAGCTTCCCCCAGCTACCGCTGGGAGGTGCCCCCTG

>NZ_CP015726|17|16|10625665-10625752|CRISPRCasFinder
TCCCCCAGCTACCGCTGGGAGGTGCCCCCTG	CGCTCTCCTCACGCGGGTTGCGAGCT
TCCCCCAGCTACCGCTGGGAGGTGCCCCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015726.1\|WP_079152078.1\|10633829_10637288_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|223715
NZ_CP015726.1\|WP_063731183.1\|10623067_10624723_-\|DNA-alkylation-response-protein	unknown	unknown	gnl\|CDD\|173843
NZ_CP015726.1\|WP_063731177.1\|10619899_10620361_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP015726.1\|WP_039936333.1\|10615198_10616515_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP015726.1\|WP_063731193.1\|10629150_10629939_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236110
NZ_CP015726.1\|WP_063731191.1\|10627938_10629096_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
NZ_CP015726.1\|WP_063731181.1\|10621335_10622106_-\|DUF4239-domain-containing-protein	unknown	unknown	gnl\|CDD\|372881
NZ_CP015726.1\|WP_063731765.1\|10630008_10630623_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_CP015726.1\|WP_063731195.1\|10630639_10631797_+\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|181123
NZ_CP015726.1\|WP_063731185.1\|10624847_10625585_+\|PaaX-domain-containing-protein,-C--domain-protein	unknown	unknown	gnl\|CDD\|225864
NZ_CP015726.1\|WP_063731168.1\|10613896_10615093_+\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|235874
NZ_CP015726.1\|WP_064273764.1\|10618546_10619563_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176531
NZ_CP015726.1\|WP_063731175.1\|10619564_10619801_-\|dodecin-domain-containing-protein	unknown	unknown	gnl\|CDD\|377810
NZ_CP015726.1\|WP_063731199.1\|10632983_10633841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_039936324.1\|10631900_10632323_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223868
NZ_CP015726.1\|WP_063731189.1\|10626911_10627892_-\|acyl-CoA/acyl-ACP-dehydrogenase	unknown	unknown	gnl\|CDD\|173838
NZ_CP015726.1\|WP_063731197.1\|10632333_10632987_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015726.1\|WP_063731179.1\|10620470_10621322_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|224327
NZ_CP015726.1\|WP_063731170.1\|10616564_10618397_+\|transketolase	unknown	unknown	gnl\|CDD\|235639
NZ_CP015726.1\|WP_063731187.1\|10625798_10626803_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525

Protein	Function_ID	Function_description	E-value
NZ_CP015726.1\|WP_079152078.1\|10633829_10637288_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.34105e-52
NZ_CP015726.1\|WP_063731183.1\|10623067_10624723_-\|DNA-alkylation-response-protein	gnl\|CDD\|173843	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product. AidB is one of several genes involved in the SOS adaptive response to DNA alkylation damage, whose expression is activated by the Ada protein. Its function has not been entirely elucidated; however, it is similar in sequence and function to acyl-CoA dehydrogenases. It has been proposed that aidB directly destroys DNA alkylating agents such as nitrosoguanidines (nitrosated amides) or their reaction intermediates.	7.91169e-170
NZ_CP015726.1\|WP_063731177.1\|10619899_10620361_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	3.65763e-21
NZ_CP015726.1\|WP_039936333.1\|10615198_10616515_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	1.94579e-96
NZ_CP015726.1\|WP_063731193.1\|10629150_10629939_+\|SDR-family-oxidoreductase	gnl\|CDD\|236110	PRK07831, PRK07831, SDR family oxidoreductase.	9.17053e-160
NZ_CP015726.1\|WP_063731191.1\|10627938_10629096_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.01308e-128
NZ_CP015726.1\|WP_063731181.1\|10621335_10622106_-\|DUF4239-domain-containing-protein	gnl\|CDD\|372881	pfam14023, DUF4239, Protein of unknown function (DUF4239). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 254 and 270 amino acids in length.	1.18006e-12
NZ_CP015726.1\|WP_063731765.1\|10630008_10630623_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	5.24814e-19
NZ_CP015726.1\|WP_063731195.1\|10630639_10631797_+\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|181123	PRK07801, PRK07801, acetyl-CoA C-acetyltransferase.	0
NZ_CP015726.1\|WP_063731185.1\|10624847_10625585_+\|PaaX-domain-containing-protein,-C--domain-protein	gnl\|CDD\|225864	COG3327, PaaX, Phenylacetic acid-responsive transcriptional repressor [Transcription].	1.41264e-39
NZ_CP015726.1\|WP_063731168.1\|10613896_10615093_+\|NAD(P)-binding-protein	gnl\|CDD\|235874	PRK06847, PRK06847, hypothetical protein; Provisional.	6.81201e-49
NZ_CP015726.1\|WP_064273764.1\|10618546_10619563_+\|hypothetical-protein	gnl\|CDD\|176531	cd08589, PI-PLCc_SaPLC1_like, Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cyclic phosphate simultaneously. SaPLC1 and other members in this subfamily have two Ca2+-chelating amino acid substitutions which convert them from metal-independent enzymes to metal-dependent bacterial PI-PLC. Additionally, SaPLC1 active site utilizes a mechanism of amino acid juxtaposition, swapping amino acid positions, to adapt a calcium binding pocket and maintain more ideal active site geometry to support efficient catalysis.	1.50937e-94
NZ_CP015726.1\|WP_063731175.1\|10619564_10619801_-\|dodecin-domain-containing-protein	gnl\|CDD\|377810	pfam07311, Dodecin, Dodecin. Dodecin is a flavin-binding protein,found in several bacteria and few archaea and represents a stand-alone version of the SHS2 domain. It most closely resembles the SHS2 domains of FtsA and Rpb7p, and represents a single domain small-molecule binding form.	2.48576e-34
NZ_CP015726.1\|WP_039936324.1\|10631900_10632323_+\|hypothetical-protein	gnl\|CDD\|223868	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane].	4.46025e-07
NZ_CP015726.1\|WP_063731189.1\|10626911_10627892_-\|acyl-CoA/acyl-ACP-dehydrogenase	gnl\|CDD\|173838	cd00567, ACAD, Acyl-CoA dehydrogenase. Both mitochondrial acyl-CoA dehydrogenases (ACAD) and peroxisomal acyl-CoA oxidases (AXO) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. In contrast, AXO catalyzes a different oxidative half-reaction, in which the reduced FAD is reoxidized by molecular oxygen. The ACAD family includes the eukaryotic beta-oxidation enzymes, short (SCAD), medium (MCAD), long (LCAD) and very-long (VLCAD) chain acyl-CoA dehydrogenases. These enzymes all share high sequence similarity, but differ in their substrate specificities. The ACAD family also includes amino acid catabolism enzymes such as Isovaleryl-CoA dehydrogenase (IVD), short/branched chain acyl-CoA dehydrogenases(SBCAD), Isobutyryl-CoA dehydrogenase (IBDH), glutaryl-CoA deydrogenase (GCD) and Crotonobetainyl-CoA dehydrogenase. The mitochondrial ACAD's are generally homotetramers, except for VLCAD, which is a homodimer. Related enzymes include the SOS adaptive reponse proten aidB, Naphthocyclinone hydroxylase (NcnH), and and Dibenzothiophene (DBT) desulfurization enzyme C (DszC).	3.65772e-27
NZ_CP015726.1\|WP_063731179.1\|10620470_10621322_+\|metallophosphoesterase	gnl\|CDD\|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	2.7681e-21
NZ_CP015726.1\|WP_063731170.1\|10616564_10618397_+\|transketolase	gnl\|CDD\|235639	PRK05899, PRK05899, transketolase; Reviewed.	0
NZ_CP015726.1\|WP_063731187.1\|10625798_10626803_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.29094e-103

>NZ_CP015726.1|WP_063731185.1|10624847_10625585_+|PaaX-domain-containing-protein,-C--domain-protein
MDDTGTLTLRPLTARSIVLSTLLGHHPPQLPARALVRVGALFGTAEGTVRVALTRMVAAGDLEQQGGAYRLTDRLLARQARQDDSRAPGTRRWDGTWEIAVVTPDRRPAPERAALRQAMAALRLAELREGTWLRPANLVRPRPPVVAEQCGCFTATPEDDPAALAARLWDLPDWADRADRLVEALDAARSPADSFTVAAAMLRHLLTDPVLPDELLPRGWPGAELRARYDAFETDFRGLLRQYTA
>NZ_CP015726.1|WP_063731183.1|10623067_10624723_-|DNA-alkylation-response-protein
MSATHEVLNQAPPLAGFTTADDPALLEALRRDGAEWAEPQVREVGARAGSAEVQDWARMAEEHHPVLHTHDRYGHRIDEVEYHPAYHQLMTTAVESGQHAAAWAETRPGRHLARAATFYAFAQAEPGHGCPISMTYAAIPALRAEPELAAAYEPLLTARTYDFGLRAPLTKRGLIAGMSMTEKQGGSDVRANTTEAVPSSADDGTYLLTGHKWFTSAPMSDVFLTLAQAPEGVTCFLVPRVLPDGTRNALYLQRLKNKLGNRANASSEVEYDRAVAWRIGEPGRGVRTIVEMVNVTRLDCVIGSAAGMRAGLRQALHHCEHRRAFGAELIDQPLMRNVLADLAVESEAATTLAMRLATALDRAEAGDAGEAALRRLGLAVSKYWVCKRAATHAAEALECLGGNGYVEDSGMPRLYREAPLQSIWEGSGNVAALDVLRALGRETGALDAVLAEVDAAAGADARLDAAAARLRALLPQLADPQRAQVLARRLAEQMTLLLQGSLLVRYSHPAVADAFCASRLDGDWGHAFGTLPPGTDTGPILDRARPKDLRA
>NZ_CP015726.1|WP_063731181.1|10621335_10622106_-|DUF4239-domain-containing-protein
MPEWLILILLMAGICAAVVVLAILNARRLGDDDDPSETPDVLDYMIMMIGVVYAIVLGLAIAGVWESRGAAQDGVRTEAQALHEVSERVSVYPQPVRDRIRDDVDAYVHHVVSREWKVMVDRGELTDRGTDLLARLRHDVTLAKPRTDLQSQAYQPIVDQVAAVDDARGARQQSAGPTMPDVVWVGLLFGAALVIGLVFTLQIRRSPRELMLAVMFTALIIFLLYLVWDFDEPFGRTVGEATTPFTDLFPGVRGGT
>NZ_CP015726.1|WP_063731179.1|10620470_10621322_+|metallophosphoesterase
MGGTHRGELLAISDLHVAYEENRAIVERLRPGSEDDWLIVAGDVGEVFADIEWALGLLSERFAKVIWSPGNHELWTHPKDPVEARGVARYEALVEMCRSKGIVTPEDPYPVWEGIGGPLTIAPLFLLYDYTFRLDGLTTKEAALAHAHDEGVVCTDEHFLHPDPYPTRDAWCRARVAETEARLAACDPALKTVLINHWPMTRLPTRVLRYPDFALWCGTELTADWHVRFRAETVVYGHLHIPRNTVEDGVKFQEVSVGYPREWKAHGRLPEDPLRRVLPVPVS
>NZ_CP015726.1|WP_063731177.1|10619899_10620361_-|universal-stress-protein
MVDKLPASFERGTDGPKVIVVGLDGSESSWRAAAYAAGLARRQNALLAVVYVQPVMAAGAALGASVADTTGEVAEELLREMREATERLRGVFEVRWEFHTFRGDPYNGLVTAADELKADAVVVGASEQAGHRIVGSVAVRLVKAGRWPVTVVP
>NZ_CP015726.1|WP_063731175.1|10619564_10619801_-|dodecin-domain-containing-protein
MSHTYRVTEIVGSSTESVDDAIRSGITRASKTLRNLDWFEVGAVRGHIENGRIAHYQVGLKVGFRLEDTDSGSGDLPG
>NZ_CP015726.1|WP_064273764.1|10618546_10619563_+|hypothetical-protein
MAVAAAAAALCLTAAEGASPAAAAEPSYAATTGVGVHNAYEKAKYPYFADALDSGASLLELDVWTNAFGAGWRASHGNPLGNDNNCENAASPAELRTKARNQSLAGCLADMRAWHDAHPGHRPIVIKTELKDGFYDKSGRGPDDLDALLSGTLGDALLRPADVVGDHDDLDQAVRAGGWPARSALAGKFIVELIPGTVEENNPLDTLWTDREYATHLRDLAAAGQLRRGAAFPAVHTAASGDPRTRYQDAAIRPWFVFFDGDASAYVTKNIDTAWYDTRHYILIMTDAQNVAPAIDGTSPTEAQARARVNDLAARHASFATADWYPLPSVLSAVVPRG
>NZ_CP015726.1|WP_063731170.1|10616564_10618397_+|transketolase
MRHEQLSELGQQLRVDSVRSSAAAGSGHPTSSMSAADLMAVLMGNHLRYDFEKPEHPGNDHLIFSKGHASPLLYSVYKAAGALKDEELLTFRKLGSRLEGHPTPELPWVDVATGSLGQGLPYGVGMALAGKRLDHVSSRVWVLCGDSEMAEGSVWEAFEHAGYERLDNLTAIIDVNRLGQRGPTRHQWDLDAYARRIRAFDWHTIEVDGHDIAAIDRAYGEATSTIGRPTAIIARTQKGRGVASVENHEGMHGKPLKDPEEAIAELGGVRNMAVPVLGPPAEQPTRPTSEGPLSLPRFNTGDTVPTRDAFGEALAAVGTARGDVVALDGEVGDSTRLEYFHKEHPERYFEFYIAEQQMVAAAVGMQTRGWNPYACTFSAFLTRAYDFVRMASVSRANLNLIGSHAGVAIGQDGPSQMGLEDLAAMRAVHGSTVLYPCDANQTAQLTATMAELSGIRYLRTSRGGTPVIYPDSERFPIGGSKILRATESDRVTLVAAGITVHEAIAAADRLAQDGISARVIDLYSLKPVDVEALRTAAEVTGRLITVEDHHPEGGVGDAVQGAFADGHPAPRIVRLAVRNMPVSGTPAEQLNQAGIDAEAITAAARELVAA
>NZ_CP015726.1|WP_039936333.1|10615198_10616515_+|NAD(P)/FAD-dependent-oxidoreductase
MSPVRIVIVGAGFAGYQAARTLSRSLRRSAEIVLINPNDYFLYLPLLPEVAAGVLEPRRVSVSLTGTLPHVRLVLGNVDSVDLTGRRVTWTDPEGGRGEMGYDRLVLAVGSVNKLLPIPGVAEHAHGFRGMPEALFLRDHVTRQIEMAANTRDPRERAARRTFVVVGAGYTGTEVAAHGVLSTDALARQNTALRREPRPRWVLIDVAKRVLPGLDERLSRTADRVLRRRGVDVRLGTSVKEATSDGILLDDGEFIDTRSLIWCVGVRPDPLVEDLGLATEHGRLRVDQYLAVPGHPEVLACGDAAAVPDLTRPGEFTAMTAQHAQRQGKAAARNILASLGRGAPRPYKHHDLGFTVDLGGVKAAADPLHIPLAGPAANAVTRGYHLMAMPGNRVRVATDWLLDAALPRQAVQFGLVPSWSVPLDTESPEVARLGRGGG
>NZ_CP015726.1|WP_063731168.1|10613896_10615093_+|NAD(P)-binding-protein
MTKALIIGGGIAGTVTAMALHKAGVDAVVYEAYPPDATDTGGAFLLVANNGLEALRTIDAHGPVLERAFPASRVEFISNTGKRLGDKPMSGAQDGGLGAVTIRRATLARVLREEAVRRGVRIEYGKRLLAAQTGPDGRVVGSFADGGRAVGDVLIGADGIHSLIRRTIDAGAPRPRYTGQHTVCGYTRDASAPPAPDTYTMVFGKQAFFGATAAPDGEVWWFSNAPAAELSKAEQAAVTPGQWRERLTELFAEDQTPAADIVRATGENIVATAAYDLLSTPVWSEEGMVIVGDAAHACAPNAAQGASMAIEDGVVLAKCLRDLPGPRSALAAYEGLRRERVEKVAANSAGLARRNAPGPVKRALRDATMARRLDRAGTTGGDDWLTGYRIDWDEPVSA
>NZ_CP015726.1|WP_063731187.1|10625798_10626803_-|LacI-family-transcriptional-regulator
MNRPRPTLESVALHAGVSRATVSRVVNGSTRVAEDSRAAVLRAVEELGYVPNQAARSLVTQRTDSFALVLPEEPGRVFSDDQFFPGVVRGVGQELEEADKQLVLMMARSPAGRDRIERFAQARHVDGVMVASVHGADPLPAALARMGIPVVCNERLLGSTALPYVGVDNAGGAALAVRHLLGSGRTRVVTVAGPQDMVAGIDRLTGYRTALKEAGREPVVAAGDFTQESGAVAMRELLGREPELDAVFVASDLMGLGVLRALRQAGRRVPEDVAVVGFDDVQAARYADPPLTTVRQPIAEIGRRLARQLLRLAGGEAIEPAVVLDVELVLRGSA
>NZ_CP015726.1|WP_063731189.1|10626911_10627892_-|acyl-CoA/acyl-ACP-dehydrogenase
MRFLLDRAQSEFGRTLDRMLGAADTPGAARAWARGEHAPGLALWGRLAEAGVTALAVPEAYEGVGPLPVELAVACVELGRHAVPGPWAETAAAAVLLTASPAAGDRLPPIASGQTMVTVAMADGGPYALDADAAEAVLAVRGEELWLAPGHGPVRTSLDPARRLAPPLPGGEPLARGAAVAAAAERAADWAAFATAAQSLGVGLALLDRTVAYVKQRTQFGRAIGSFQAVQHQLADVLIGLEFARPLLHGAAVALAAGGSGARAEVAAAKVAAGDAAYAAARTALQLHGAIGYTDEYDLSLWIRKARALRGAWGSPSACRARVLAP
>NZ_CP015726.1|WP_063731191.1|10627938_10629096_-|acyl-CoA-dehydrogenase
MDLDLTERQEAFRAEARRWLAAHVPAAPLPSLETAEGFAAHRAWERTLASGRWSAVTWPEEYGGRGASVLEWLLFEEEYYAAGAPGRVSQNGVSLLAPTLFDHGTAEQRARILPPMARGEVVWAQAWSEPEAGSDLASLRSTARRADGGWLLSGQKTWSSRAAFADRAFGLFRSHREPGAPPHRGLTYLMFPLDAPGVTVRPIGRLDGKPAFAELFLDEVFVPDEDVIGDPGQGWRVAMSTAGNERGLTLRSPGRYTAAARRLTALWRERAADGDEAGSALRDRVADAVIRARAYELFAYAGASRLAAGERLGAESSLNKVFWSELDISLHETALDLLGPCGELAEDGWAEGYVFALAGPIYAGTNEIQRDIVAERLLGLPKGRR
>NZ_CP015726.1|WP_063731193.1|10629150_10629939_+|SDR-family-oxidoreductase
MDNKPSYVPGHGLLTGRTAVITAAAGAGIGGATARRFLEEGARIVIGDAHARRLDETAATLAEEFGADRVAGLTCDVTDEDAVAELFDLAEEHHGRLDVVVNNAGLGGTTELTEMTDDQWHKVIDVTLNGTFRCTRAALRRMKARASGGAAIVNNASVVGWRAQAGQAHYAAAKAGVMALTRCAAVEAAAYGVRVNAVSPSLAMHPHLVKVTTPELLAELTEREAFGRYAEPWEVANVIVFLASGYASYMTGETVSVSSRHP
>NZ_CP015726.1|WP_063731765.1|10630008_10630623_+|TetR/AcrR-family-transcriptional-regulator
MSGNSKKTTVSPSPERRRELLSTAAEVFAAQGYNATTVRRIADEAGMLAGSLYYHFDSKESMVDEILSTFLDELWAGYDEVLRAGLGPRETIEALVTESFREIDRHRAAVAIYQKESRQLAALPRFGYLTDSQRRFEGAWLGTLERGVADGVFRADLDTRLAYRFLRDTVWVAASWYRPGGQHSAEEIARQYVSMVLDGITPRP
>NZ_CP015726.1|WP_063731195.1|10630639_10631797_+|acetyl-CoA-C-acetyltransferase
MAEAFIVEAVRTPVGRRKGGLASVHPADLGAHVLRALMERSGADPAAVEDVVFGCLDTVGPQSGDIARTCWLAAGLPEEVPGVTVDRQCGSSQQALHFAAQAVLSGTQDLVVAGGVQNMSQVPIAFASRQAAEPLGLTEGPFAGSEGWRARYGDRPVSQFYGAEMIAEKWGIGRAEMEEFALRSHRRALRAIDEGRFDREVVPYGDVRVDEGPRRDTSLEKMAALAPLMEGGRLTAALSSQVSDGAAALLVASERAVQEHGLTPRARIHHLSVRGEDPIRMLSAPIPATAYALKKTGMTIADIDLVEINEAFAPVVLAWLRESGADPERVNVNGGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGQANVTIVERL
>NZ_CP015726.1|WP_039936324.1|10631900_10632323_+|hypothetical-protein
MACGSTSLGNGEATWFCCGNAWGPCAAAGGGACGTCKSSALQAAWPNASKACWDITRPDLCGEKLPRRGCGSAIKVRHLCSGASVCVTVSDCGPRTRSFCGESSCCDGVCRSNRVIDLTPAAFSVIGSLSSGTLPVSLYE
>NZ_CP015726.1|WP_063731197.1|10632333_10632987_+|hypothetical-protein
MSAHRMSDPLDRRRFLTAAALRGATVVGTGVIGATALGAVDADAVFAAPLRRPLDPAVPAGAFVEGRITSIDGGVLEVAGSHGDYARVRVTGATSVWKVRPTTAASIETGDGLYARGVPMPDGTVAADAVWVNIVNLYTTIRGIEKTRLHLAHGSHEIVGNLLPATSSASYSGAAPTADLSGLRIGQGAQVLGAWRPSDDSVDIVRVAVGPGAGHRR
>NZ_CP015726.1|WP_063731199.1|10632983_10633841_+|hypothetical-protein
MSVATFATALDLAAPLLAGVLGVAGAGKLLGRGTARWAHRTALARLLRGGDRAALALRAFGALELLLCAVLLALPPSVAAGGAAAALGAGFLGYLGYARAAAPGASCGCTARDDGPVGARAFARAAVVAAGGLAVALARHPWWVTAPRHPAATGCCALAAVAGLVALSADRRWRMPWRRLRLRLRGHPLAGTPAGVPVAATVELLEHSLAWQSTSPLVRSALLDHWDEDGWRILQYAGVHARGGDAARPVVVLFALDAEESRDAVREPAVRVSVLDADTGEPLRG
>NZ_CP015726.1|WP_079152078.1|10633829_10637288_-|SpoIIE-family-protein-phosphatase
MMSGIDWSATSLGSTEAWPPRLVEALRIVLFTEQPMAVFWGPEYTMLYNDGYADIIGSKHPGALGRSGRDVFPENWELSVAPLFETVWESRKPSLVTDRAFVIQRRGFLEQSYFDVSIQPLLDDGAMGGVLCVVTETTARVLSERRLRLLAGLGARTAGLRTPQSVARTVAEMLDIHRDDVPFTAFYLVPAPGRLRLAASAAIPPEAAEAAREVRLDRVEETTGLAARLAAVVGDAAPARLPGALFSMPGEEALAHPLVRSDTVEGVLVMGINPRLPATAPYQDFFEVLAATVGAALSAAHTQHEQRRRAESLAELDRAKTVFFSNISHEFRTPLTLILGPVQQALADEDRPARRSQLELAERSALRLLKLVNTLLDVSRVEAGGLKGTFEPVDLSRITAELAAIFRSSFDMAGLTLEVDCPPLPEPVHIDREMWEKIVLNLISNALKFTFTGGVTVRMAAAGHHARLTVSDTGSGIPREELPYLFERFHRVRGARSRSYEGSGVGLALVKDLVELHSGTIAVTSVPARGTEFTVEIPFGTAHLEDVRGEAPSVRGGTGEAERAAAYAQEARHWLGTAPSEPLEAQESPARASGVAEAPVEAPVEAPFEAPSQAPAKAPFEAPVEAAEEPYAAGPAEPAPARRPRLLVADDNADVRSYLGDLLGREHDVLLAADGRAALDTALAHPVDLVLTDVMMPRLDGFGLVRALRADPRTTRLPIIMLTARAGEESTVRGLGAGADDYLAKPFSARQLLARVSANLELSRLRERVLSDSRRQADMLTSLSQASLLLSDTLDPPQVLDTARELLVPALADEIRIRLADPRAERPLYAAGESVAPGGLLDRALGETLLAGTAPEPPATGGPLLSVPLLAHGRTLGALAIARREGVYTMADRQYLQGVAGRLALAYDNAARFRNERHLALTLQRALLPQTLPQVPGLRTASYYEASASGAEIGGDWYDVIALPDGEMGLAIGDVMGHDVDAATVMGRLRSTLRGFALDRASPGVLLGKLDAYLRSLDVDHFATCLYAVYEPRTRRLRYAASGHLPPLLVAGGTTSFLGVCPNAPLGLADEPPVGHETRLPPGAGLLLFTDGLVENSHLPLDDGLAALRRACDGLTPPVLADPQAIIDRALGLLDIPGRVDDDTALLAASAP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP015726_2	2.1\|2545961\|28\|NZ_CP015726\|CRISPRCasFinder	2545961-2545988	28	NZ_CP015726.1	8052307-8052334	0	1.0
NZ_CP015726_17	17.1\|10625696\|26\|NZ_CP015726\|CRISPRCasFinder	10625696-10625721	26	NZ_CP015726.1	8052309-8052334	0	1.0
NZ_CP015726_1	1.1\|2545713\|32\|NZ_CP015726\|CRISPRCasFinder	2545713-2545744	32	NZ_CP015726.1	4681156-4681187	1	0.969

1. spacer 2.1|2545961|28|NZ_CP015726|CRISPRCasFinder matches to position: 8052307-8052334, mismatch: 0, identity: 1.0

agctcgcaacccgcgtgaggagagcgca	CRISPR spacer
agctcgcaacccgcgtgaggagagcgca	Protospacer
****************************

2. spacer 17.1|10625696|26|NZ_CP015726|CRISPRCasFinder matches to position: 8052309-8052334, mismatch: 0, identity: 1.0

cgctctcctcacgcgggttgcgagct	CRISPR spacer
cgctctcctcacgcgggttgcgagct	Protospacer
**************************

3. spacer 1.1|2545713|32|NZ_CP015726|CRISPRCasFinder matches to position: 4681156-4681187, mismatch: 1, identity: 0.969

cgtgcgatcgcaagacggagggtcgccctcgc	CRISPR spacer
cgtgcgatcgcaaggcggagggtcgccctcgc	Protospacer
**************.*****************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015726_15	15.21\|9133742\|39\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9133742-9133780	39	MN234216	Streptomyces phage Gilgamesh, complete genome	522-560	0	1.0
NZ_CP015726_11	11.1\|8236728\|28\|NZ_CP015726\|CRISPRCasFinder	8236728-8236755	28	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1551352-1551379	4	0.857
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	NZ_CP049029	Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence	108060-108087	5	0.821
NZ_CP015726_1	1.1\|2545713\|32\|NZ_CP015726\|CRISPRCasFinder	2545713-2545744	32	NZ_CP027025	Streptomyces sp. WAC00288 plasmid p3, complete sequence	34596-34627	6	0.812
NZ_CP015726_2	2.1\|2545961\|28\|NZ_CP015726\|CRISPRCasFinder	2545961-2545988	28	NZ_CP009155	Burkholderia pseudomallei strain TSV202 plasmid 1, complete sequence	167300-167327	6	0.786
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	71987-72014	6	0.786
NZ_CP015726_15	15.20\|9133678\|35\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9133678-9133712	35	GQ919031	Streptomyces phage ZL12, complete genome	53202-53236	6	0.829
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	NZ_CP039426	Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence	90459-90486	7	0.75
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	NZ_CP039431	Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence	90459-90486	7	0.75
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	NZ_CP045385	Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence	70306-70333	7	0.75
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	MN369748	Mycobacterium phage Miko, complete genome	25784-25811	7	0.75
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	MF185727	Mycobacterium phage BobSwaget, complete genome	25644-25671	7	0.75
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	MK801735	Mycobacterium Phage Rachaly, complete genome	25659-25686	7	0.75
NZ_CP015726_8	8.1\|6033340\|28\|NZ_CP015726\|CRISPRCasFinder	6033340-6033367	28	MF324899	Mycobacterium phage Lokk, complete genome	25663-25690	7	0.75
NZ_CP015726_11	11.1\|8236728\|28\|NZ_CP015726\|CRISPRCasFinder	8236728-8236755	28	NC_006462	Thermus thermophilus HB8 plasmid pTT27, complete sequence	120439-120466	7	0.75
NZ_CP015726_11	11.1\|8236728\|28\|NZ_CP015726\|CRISPRCasFinder	8236728-8236755	28	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	260260-260287	7	0.75
NZ_CP015726_14	14.10\|9123717\|37\|NZ_CP015726\|CRISPRCasFinder	9123717-9123753	37	NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	106203-106239	7	0.811
NZ_CP015726_14	14.10\|9123717\|37\|NZ_CP015726\|CRISPRCasFinder	9123717-9123753	37	NZ_CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	13496-13532	7	0.811
NZ_CP015726_14	14.10\|9123717\|37\|NZ_CP015726\|CRISPRCasFinder	9123717-9123753	37	NZ_CP015215	Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence	91489-91525	7	0.811
NZ_CP015726_14	14.10\|9123717\|37\|NZ_CP015726\|CRISPRCasFinder	9123717-9123753	37	CP047034	Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence	99724-99760	7	0.811
NZ_CP015726_14	14.10\|9123717\|37\|NZ_CP015726\|CRISPRCasFinder	9123717-9123753	37	NZ_CP015291	Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence	114032-114068	7	0.811
NZ_CP015726_14	14.10\|9123717\|37\|NZ_CP015726\|CRISPRCasFinder	9123717-9123753	37	NZ_CP047040	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence	99643-99679	7	0.811
NZ_CP015726_14	14.10\|9123717\|37\|NZ_CP015726\|CRISPRCasFinder	9123717-9123753	37	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	9896-9932	7	0.811
NZ_CP015726_14	14.30\|9123724\|37\|NZ_CP015726\|PILER-CR	9123724-9123760	37	NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	106203-106239	7	0.811
NZ_CP015726_14	14.30\|9123724\|37\|NZ_CP015726\|PILER-CR	9123724-9123760	37	NZ_CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	13496-13532	7	0.811
NZ_CP015726_14	14.30\|9123724\|37\|NZ_CP015726\|PILER-CR	9123724-9123760	37	NZ_CP015215	Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence	91489-91525	7	0.811
NZ_CP015726_14	14.30\|9123724\|37\|NZ_CP015726\|PILER-CR	9123724-9123760	37	CP047034	Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence	99724-99760	7	0.811
NZ_CP015726_14	14.30\|9123724\|37\|NZ_CP015726\|PILER-CR	9123724-9123760	37	NZ_CP015291	Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence	114032-114068	7	0.811
NZ_CP015726_14	14.30\|9123724\|37\|NZ_CP015726\|PILER-CR	9123724-9123760	37	NZ_CP047040	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence	99643-99679	7	0.811
NZ_CP015726_14	14.30\|9123724\|37\|NZ_CP015726\|PILER-CR	9123724-9123760	37	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	9896-9932	7	0.811
NZ_CP015726_14	14.7\|9123521\|36\|NZ_CP015726\|CRISPRCasFinder	9123521-9123556	36	NC_014214	Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence	77827-77862	8	0.778
NZ_CP015726_14	14.12\|9123850\|36\|NZ_CP015726\|CRISPRCasFinder	9123850-9123885	36	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1083722-1083757	8	0.778
NZ_CP015726_14	14.12\|9123850\|36\|NZ_CP015726\|CRISPRCasFinder	9123850-9123885	36	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	729345-729380	8	0.778
NZ_CP015726_14	14.27\|9123528\|36\|NZ_CP015726\|PILER-CR	9123528-9123563	36	NC_014214	Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence	77827-77862	8	0.778
NZ_CP015726_14	14.32\|9123857\|36\|NZ_CP015726\|PILER-CR	9123857-9123892	36	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1083722-1083757	8	0.778
NZ_CP015726_14	14.32\|9123857\|36\|NZ_CP015726\|PILER-CR	9123857-9123892	36	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	729345-729380	8	0.778
NZ_CP015726_15	15.2\|9132502\|34\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9132502-9132535	34	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	376087-376120	8	0.765
NZ_CP015726_15	15.2\|9132502\|34\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9132502-9132535	34	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1436978-1437011	8	0.765
NZ_CP015726_15	15.14\|9133290\|35\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9133290-9133324	35	KT803877	Burkholderia phage PE067, complete genome	17041-17075	8	0.771
NZ_CP015726_14	14.2\|9123196\|35\|NZ_CP015726\|CRISPRCasFinder	9123196-9123230	35	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1711768-1711802	9	0.743
NZ_CP015726_14	14.4\|9123324\|35\|NZ_CP015726\|CRISPRCasFinder,PILER-CR	9123324-9123358	35	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1342624-1342658	9	0.743
NZ_CP015726_15	15.6\|9132763\|40\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9132763-9132802	40	NZ_CP015446	Streptomyces sp. S8 plasmid unnamed, complete sequence	33422-33461	9	0.775
NZ_CP015726_15	15.6\|9132763\|40\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9132763-9132802	40	NC_023282	Streptomyces sp. FR1 plasmid pFRL2, complete sequence	44862-44901	9	0.775
NZ_CP015726_15	15.22\|9133810\|36\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9133810-9133845	36	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	216337-216372	9	0.75
NZ_CP015726_14	14.12\|9123850\|36\|NZ_CP015726\|CRISPRCasFinder	9123850-9123885	36	KM083128	Mycobacterium phage Sparky, complete genome	60390-60425	10	0.722
NZ_CP015726_14	14.32\|9123857\|36\|NZ_CP015726\|PILER-CR	9123857-9123892	36	KM083128	Mycobacterium phage Sparky, complete genome	60390-60425	10	0.722
NZ_CP015726_15	15.11\|9133091\|37\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9133091-9133127	37	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	256670-256706	10	0.73
NZ_CP015726_15	15.14\|9133290\|35\|NZ_CP015726\|PILER-CR,CRISPRCasFinder,CRT	9133290-9133324	35	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	349679-349713	11	0.686

1. spacer 15.21|9133742|39|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to MN234216 (Streptomyces phage Gilgamesh, complete genome) position: , mismatch: 0, identity: 1.0

ggcgcggtgaagccgtacgccacgatgacgtcattgccc	CRISPR spacer
ggcgcggtgaagccgtacgccacgatgacgtcattgccc	Protospacer
***************************************

2. spacer 11.1|8236728|28|NZ_CP015726|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.857

cggctggtggacgagttctgccacgagg	CRISPR spacer
ctgctggtggaccagttcggccacgacg	Protospacer
* ********** ***** ******* *

3. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to NZ_CP049029 (Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence) position: , mismatch: 5, identity: 0.821

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
aacccgagtccgtcaccgcagccggggc	Protospacer
*  *****.****************  *

4. spacer 1.1|2545713|32|NZ_CP015726|CRISPRCasFinder matches to NZ_CP027025 (Streptomyces sp. WAC00288 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.812

cgtgcgatcgcaagacggagggtcgccctcgc	CRISPR spacer
cgtgcgatcgcaaggcggaggggcgccccgat	Protospacer
**************.******* *****. ..

5. spacer 2.1|2545961|28|NZ_CP015726|CRISPRCasFinder matches to NZ_CP009155 (Burkholderia pseudomallei strain TSV202 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

agctcgcaacccgcgtgaggagagcgca	CRISPR spacer
cgggcgcaacccgcgtgagcagcgcgcg	Protospacer
 *  *************** ** ****.

6. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
gcaccgagcccgtcaccgcgggcggggc	Protospacer
..*****************.* ***  *

7. spacer 15.20|9133678|35|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to GQ919031 (Streptomyces phage ZL12, complete genome) position: , mismatch: 6, identity: 0.829

gtgaggtagcaggtgacgtacgacggggcttcgtt	CRISPR spacer
gtgaggtagcaggtgacgtaggacggttcggggtt	Protospacer
******************** *****  *   ***

8. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.75

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
ccaccgaggccgtcaccgcaaccggaaa	Protospacer
 .****** ***********.****

9. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.75

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
ccaccgaggccgtcaccgcaaccggaaa	Protospacer
 .****** ***********.****

10. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to NZ_CP045385 (Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence) position: , mismatch: 7, identity: 0.75

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
gcctcgatcccgacaccgcagccggtct	Protospacer
.. .*** **** **************.

11. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to MN369748 (Mycobacterium phage Miko, complete genome) position: , mismatch: 7, identity: 0.75

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
tggtggagcccgtcaccgcaggcggtgc	Protospacer
  .. **************** **** *

12. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to MF185727 (Mycobacterium phage BobSwaget, complete genome) position: , mismatch: 7, identity: 0.75

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
tggtggagcccgtcaccgcaggcggtgc	Protospacer
  .. **************** **** *

13. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to MK801735 (Mycobacterium Phage Rachaly, complete genome) position: , mismatch: 7, identity: 0.75

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
tggtggagcccgtcaccgcaggcggtgc	Protospacer
  .. **************** **** *

14. spacer 8.1|6033340|28|NZ_CP015726|CRISPRCasFinder matches to MF324899 (Mycobacterium phage Lokk, complete genome) position: , mismatch: 7, identity: 0.75

ataccgagcccgtcaccgcagccggtcc	CRISPR spacer
tggtggagcccgtcaccgcaggcggtgc	Protospacer
  .. **************** **** *

15. spacer 11.1|8236728|28|NZ_CP015726|CRISPRCasFinder matches to NC_006462 (Thermus thermophilus HB8 plasmid pTT27, complete sequence) position: , mismatch: 7, identity: 0.75

cggctggtggacgagttctgccacgagg	CRISPR spacer
tactgggtggacgagccctgccacgagg	Protospacer
.. . **********..***********

16. spacer 11.1|8236728|28|NZ_CP015726|CRISPRCasFinder matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 7, identity: 0.75

cggctggtggacgagttctgccacgagg	CRISPR spacer
tactgggtggacgagccctgccacgagg	Protospacer
.. . **********..***********

17. spacer 14.10|9123717|37|NZ_CP015726|CRISPRCasFinder matches to NZ_CP051471 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

18. spacer 14.10|9123717|37|NZ_CP015726|CRISPRCasFinder matches to NZ_CP030274 (Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

19. spacer 14.10|9123717|37|NZ_CP015726|CRISPRCasFinder matches to NZ_CP015215 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

20. spacer 14.10|9123717|37|NZ_CP015726|CRISPRCasFinder matches to CP047034 (Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

21. spacer 14.10|9123717|37|NZ_CP015726|CRISPRCasFinder matches to NZ_CP015291 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

22. spacer 14.10|9123717|37|NZ_CP015726|CRISPRCasFinder matches to NZ_CP047040 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

23. spacer 14.10|9123717|37|NZ_CP015726|CRISPRCasFinder matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

24. spacer 14.30|9123724|37|NZ_CP015726|PILER-CR matches to NZ_CP051471 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

25. spacer 14.30|9123724|37|NZ_CP015726|PILER-CR matches to NZ_CP030274 (Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

26. spacer 14.30|9123724|37|NZ_CP015726|PILER-CR matches to NZ_CP015215 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

27. spacer 14.30|9123724|37|NZ_CP015726|PILER-CR matches to CP047034 (Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

28. spacer 14.30|9123724|37|NZ_CP015726|PILER-CR matches to NZ_CP015291 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

29. spacer 14.30|9123724|37|NZ_CP015726|PILER-CR matches to NZ_CP047040 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

30. spacer 14.30|9123724|37|NZ_CP015726|PILER-CR matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 7, identity: 0.811

tcgacgaa-ggccccgtcaccatcagcggcaagtcgct	CRISPR spacer
-agacgagcagcaccgtcaccatcagcggcaggtcgcg	Protospacer
  *****. .** ******************.*****

31. spacer 14.7|9123521|36|NZ_CP015726|CRISPRCasFinder matches to NC_014214 (Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence) position: , mismatch: 8, identity: 0.778

ggacgggggtcagggtgtcccccaccaccgtgttgg-	CRISPR spacer
gttcgggggtcaggctgtcccccacgacca-gcgggc	Protospacer
*  *********** ********** ***. *. **

32. spacer 14.12|9123850|36|NZ_CP015726|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.778

cggctcggtcggcggccatccccgggccgcgccccg	CRISPR spacer
tggccgtgctggcggccacccccgggctgcgccccg	Protospacer
.***.  *..********.********.********

33. spacer 14.12|9123850|36|NZ_CP015726|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.778

cggctcggtcggcggccatccccgggccgcgccccg	CRISPR spacer
tggccgtgctggcggccacccccgggctgcgccccg	Protospacer
.***.  *..********.********.********

34. spacer 14.27|9123528|36|NZ_CP015726|PILER-CR matches to NC_014214 (Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence) position: , mismatch: 8, identity: 0.778

ggacgggggtcagggtgtcccccaccaccgtgttgg-	CRISPR spacer
gttcgggggtcaggctgtcccccacgacca-gcgggc	Protospacer
*  *********** ********** ***. *. **

35. spacer 14.32|9123857|36|NZ_CP015726|PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.778

cggctcggtcggcggccatccccgggccgcgccccg	CRISPR spacer
tggccgtgctggcggccacccccgggctgcgccccg	Protospacer
.***.  *..********.********.********

36. spacer 14.32|9123857|36|NZ_CP015726|PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.778

cggctcggtcggcggccatccccgggccgcgccccg	CRISPR spacer
tggccgtgctggcggccacccccgggctgcgccccg	Protospacer
.***.  *..********.********.********

37. spacer 15.2|9132502|34|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.765

caggggaacgggacggggacgtggc--agtactccg	CRISPR spacer
gaggggcacgggacggggacgcggctgggtgatc--	Protospacer
 ***** **************.***  .**. **

38. spacer 15.2|9132502|34|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.765

caggggaacgggacggggacgtggc--agtactccg	CRISPR spacer
gaggggcacgggacggggacgcggctgggtgatc--	Protospacer
 ***** **************.***  .**. **

39. spacer 15.14|9133290|35|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to KT803877 (Burkholderia phage PE067, complete genome) position: , mismatch: 8, identity: 0.771

gccggtcgtg---gatcgcgcaggaccccgcgcgcgcg	CRISPR spacer
---agccgtatgcgatcgcgcaggacgccgcgagcgcg	Protospacer
   .*.***.   ************* ***** *****

40. spacer 14.2|9123196|35|NZ_CP015726|CRISPRCasFinder matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.743

ccagttgccccttgcatccgcgtacccggaccgta-	CRISPR spacer
tggattgccccttgcatcggcgtacacgg-cggcaa	Protospacer
. ..************** ****** *** * *.*

41. spacer 14.4|9123324|35|NZ_CP015726|CRISPRCasFinder,PILER-CR matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.743

aagtccatctcgggcgtgatcaacgggacgccgtt	CRISPR spacer
tcgagaaactcgggcgtgagcaacggaacgccgct	Protospacer
  *   * *********** ******.******.*

42. spacer 15.6|9132763|40|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015446 (Streptomyces sp. S8 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.775

agaccatccgctacacagccgacgtcgtagccgtcacccc	CRISPR spacer
agaccatccgctacaccgccgacgttgtcctgctcgccgc	Protospacer
**************** ********.**  .  **.** *

43. spacer 15.6|9132763|40|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to NC_023282 (Streptomyces sp. FR1 plasmid pFRL2, complete sequence) position: , mismatch: 9, identity: 0.775

agaccatccgctacacagccgacgtcgtagccgtcacccc	CRISPR spacer
agacgatccgctacaccgccgacgtcgtcctgctcgccgc	Protospacer
**** *********** ***********  .  **.** *

44. spacer 15.22|9133810|36|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.75

gcgatcacggtgacggtgcggccggggctgcggcgg	CRISPR spacer
ccggaggcggtgacggtgcggccgtggcggcggacg	Protospacer
 **.  .***************** *** ****  *

45. spacer 14.12|9123850|36|NZ_CP015726|CRISPRCasFinder matches to KM083128 (Mycobacterium phage Sparky, complete genome) position: , mismatch: 10, identity: 0.722

cggctcggtcggcggccatccccgggccgcgccccg	CRISPR spacer
ccttcgggtcggcggccatccgcgcgccgcgctgtg	Protospacer
*  .. *************** ** *******. .*

46. spacer 14.32|9123857|36|NZ_CP015726|PILER-CR matches to KM083128 (Mycobacterium phage Sparky, complete genome) position: , mismatch: 10, identity: 0.722

cggctcggtcggcggccatccccgggccgcgccccg	CRISPR spacer
ccttcgggtcggcggccatccgcgcgccgcgctgtg	Protospacer
*  .. *************** ** *******. .*

47. spacer 15.11|9133091|37|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.73

ccaagggcgtgggaggcgcggggggcgcgggggtcag	CRISPR spacer
cggccggcgcgggaggcgcggcgggcgcgggaggcgc	Protospacer
* .  ****.*********** *********.* *.

48. spacer 15.14|9133290|35|NZ_CP015726|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 11, identity: 0.686

gccggtcgtggatcgcgcaggaccccgcgcgcgcg	CRISPR spacer
atcaccgagggatcgcgcaggacgccgagcgcgct	Protospacer
..*. . . ************** *** ******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

324699 : 379360

Tupanvirus(16.67%)

integrase,plate,tail

attL 311868:311886|attR 339817:339835

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
311868:311886	attL	NA	NA	NA	NA
WP_107450993.1\|324699_325023_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_063729274.1\|324910_325870_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_063729275.1\|326326_327739_+	cyclic nucleotide-binding domain-containing protein	A0A2K9L690	Tupanvirus	6.6e-24	31.3
WP_063729276.1\|327689_329009_+	hypothetical protein	NA	NA	NA	NA
WP_039940277.1\|329026_329905_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_063729277.1\|330217_332023_+	non-ribosomal peptide synthetase	NA	NA	NA	NA
WP_063729278.1\|332019_336435_+	type I polyketide synthase	NA	NA	NA	NA
WP_079151869.1\|336431_336956_+	hypothetical protein	M4T1T8	Cellulophaga_phage	1.3e-22	41.7
WP_063729279.1\|336952_337780_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_063729280.1\|337772_338417_+	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	2.7e-41	48.4
WP_063729281.1\|338429_340103_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
339817:339835	attR	NA	NA	NA	NA
WP_063729282.1\|340099_341863_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.9e-20	26.5
WP_159073516.1\|341867_343727_+	hypothetical protein	NA	NA	NA	NA
WP_063729284.1\|343723_344746_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_063729285.1\|344750_345644_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_063729286.1\|345723_346998_+	MFS transporter	NA	NA	NA	NA
WP_063729287.1\|347088_347799_+	cyclase family protein	NA	NA	NA	NA
WP_063729288.1\|347866_348790_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_009720944.1\|348777_349392_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_063729289.1\|349644_350370_+	2OG-Fe dioxygenase family protein	NA	NA	NA	NA
WP_107450981.1\|350366_351377_+	iron-containing redox enzyme family protein	NA	NA	NA	NA
WP_063729291.1\|351388_352345_+	fatty acid desaturase	NA	NA	NA	NA
WP_159073517.1\|352341_352665_+	hypothetical protein	NA	NA	NA	NA
WP_063729293.1\|352857_353424_+	nitroreductase	NA	NA	NA	NA
WP_009720938.1\|353412_353613_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_063729294.1\|353771_358361_+	hypothetical protein	NA	NA	NA	NA
WP_063729295.1\|358357_359020_+	hypothetical protein	NA	NA	NA	NA
WP_063729298.1\|361405_363256_-	hypothetical protein	NA	NA	NA	NA
WP_079151871.1\|363252_363801_-	hypothetical protein	NA	NA	NA	NA
WP_063729299.1\|363803_364940_-	hypothetical protein	NA	NA	NA	NA
WP_063729300.1\|364936_366937_-	hypothetical protein	NA	NA	NA	NA
WP_063729301.1\|366939_368229_-	hypothetical protein	NA	NA	NA	NA
WP_063729302.1\|368240_370199_-\|tail	phage tail protein I	NA	NA	NA	NA
WP_063729303.1\|370195_372253_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_063729304.1\|372249_374196_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_009720925.1\|374192_374606_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_063729305.1\|374602_375304_-	hypothetical protein	NA	NA	NA	NA
WP_009720923.1\|375300_376482_-	phage late control D family protein	NA	NA	NA	NA
WP_009720922.1\|376492_377164_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_063729306.1\|377160_377346_-	hypothetical protein	NA	NA	NA	NA
WP_009720920.1\|377351_377870_-\|tail	phage tail protein	T2KT02	uncultured_phage	1.9e-08	37.0
WP_063729307.1\|377866_379360_-\|tail	phage tail protein	H6WFT7	Cyanophage	6.6e-14	30.3

DBSCAN-SWA_2

2374067 : 2444010

Tupanvirus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063733608.1\|2374067_2375180_-\|transposase	transposase	NA	NA	NA	NA
WP_063733610.1\|2375888_2376341_-	glycosyltransferase	NA	NA	NA	NA
WP_063733613.1\|2377071_2378451_-	MFS transporter	NA	NA	NA	NA
WP_063733615.1\|2378562_2380041_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_063734082.1\|2380218_2381010_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_063733617.1\|2381231_2381771_+	formaldehyde-activating enzyme	NA	NA	NA	NA
WP_107451124.1\|2382896_2384396_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_063733620.1\|2384464_2385403_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_063733622.1\|2385467_2386628_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_107451125.1\|2386960_2387533_-\|transposase	transposase	NA	NA	NA	NA
WP_063733624.1\|2388012_2388351_+	hypothetical protein	NA	NA	NA	NA
WP_063733626.1\|2388373_2389537_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_079152236.1\|2389625_2390255_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_063733631.1\|2390400_2390871_-	hypothetical protein	NA	NA	NA	NA
WP_063733633.1\|2390867_2391728_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_107451117.1\|2391727_2392390_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_079152237.1\|2392535_2393165_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_063733639.1\|2393188_2394070_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_063733642.1\|2394157_2394697_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_063734089.1\|2394755_2395436_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_159073605.1\|2395662_2396184_+	hypothetical protein	NA	NA	NA	NA
WP_063733647.1\|2396180_2397818_+	ubiquinol-cytochrome c reductase cytochrome b subunit	NA	NA	NA	NA
WP_063733649.1\|2397920_2398859_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_063733651.1\|2399580_2400642_-	alcohol dehydrogenase catalytic domain-containing protein	A0A2K9L339	Tupanvirus	7.7e-09	29.0
WP_063733653.1\|2400717_2403912_-	cytochrome P450	V5UQK0	Mycobacterium_phage	1.4e-77	38.0
WP_063733655.1\|2404029_2404956_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_159073606.1\|2408119_2408518_-	hypothetical protein	NA	NA	NA	NA
WP_063733661.1\|2408925_2409519_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_063734090.1\|2409649_2410645_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_063733662.1\|2411038_2411521_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_063733664.1\|2411881_2412220_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_063733666.1\|2414820_2416125_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA
WP_063733667.1\|2416256_2416841_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_063733669.1\|2416960_2417797_+	EamA family transporter	NA	NA	NA	NA
WP_063733671.1\|2417841_2418489_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
WP_063733673.1\|2418530_2419238_+	hypothetical protein	NA	NA	NA	NA
WP_159073607.1\|2419313_2419604_-	hypothetical protein	NA	NA	NA	NA
WP_063733675.1\|2419600_2420560_-	nitronate monooxygenase	NA	NA	NA	NA
WP_063733677.1\|2420640_2421594_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_063733680.1\|2421641_2422910_-	MFS transporter	NA	NA	NA	NA
WP_107451118.1\|2423176_2424094_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_063733682.1\|2424144_2424549_-	tautomerase family protein	NA	NA	NA	NA
WP_063733684.1\|2424607_2425414_-	Zn-dependent hydrolase	NA	NA	NA	NA
WP_063733686.1\|2427196_2427769_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_063733687.1\|2427872_2428730_+	DMT family transporter	NA	NA	NA	NA
WP_063733691.1\|2429907_2431137_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_063733692.1\|2431173_2432025_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_063734094.1\|2433498_2434413_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_063733694.1\|2434537_2435518_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA
WP_063733696.1\|2436541_2437540_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_063733698.1\|2437920_2438826_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_063733700.1\|2439587_2440685_+\|transposase	transposase	NA	NA	NA	NA
WP_079152241.1\|2440951_2441878_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.1e-14	35.1
WP_063733705.1\|2441919_2442306_-	VOC family protein	NA	NA	NA	NA
WP_063733707.1\|2442302_2442596_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_063733710.1\|2442801_2444010_-\|transposase	IS701 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

3392091 : 3399996

Mycobacterium_phage(44.44%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063735593.1\|3392091_3392340_-	hypothetical protein	A0A0E3M306	Streptomyces_phage	1.3e-15	55.6
WP_079152461.1\|3392339_3392867_-	DUF4326 domain-containing protein	A0A142K9N0	Gordonia_phage	1.7e-28	48.0
WP_063735591.1\|3392863_3393247_-	hypothetical protein	NA	NA	NA	NA
WP_159073669.1\|3393243_3393393_-	hypothetical protein	NA	NA	NA	NA
WP_063735590.1\|3393431_3393986_-	WhiB family transcriptional regulator	A0A0A7RVQ7	Mycobacterium_phage	2.4e-06	47.5
WP_063735589.1\|3394033_3394489_-	hypothetical protein	A0A173G9J6	Propionibacterium_phage	1.4e-07	35.7
WP_063735588.1\|3394500_3394848_-	hypothetical protein	NA	NA	NA	NA
WP_159073668.1\|3394844_3395120_-	hypothetical protein	NA	NA	NA	NA
WP_063735587.1\|3395116_3397648_-	hypothetical protein	A0A023W5H8	Mycobacterium_phage	3.2e-117	49.7
WP_063735586.1\|3397776_3398415_-	hypothetical protein	A0A1J0MDL4	Mycobacterium_phage	7.6e-36	58.6
WP_063735585.1\|3398429_3399236_-	hypothetical protein	A0A068F5D1	Mycobacterium_phage	1.8e-29	35.1
WP_063735584.1\|3399232_3399436_-	hypothetical protein	Q1WDI2	Streptomyces_phage	1.7e-05	50.0
WP_079152473.1\|3399432_3399996_-	hypothetical protein	D4P7X8	Rhodococcus_phage	2.9e-47	54.0

DBSCAN-SWA_4

6580634 : 6633969

Bacillus_phage(50.0%)

protease,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063736018.1\|6580634_6582230_+\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	2.7e-66	35.3
WP_009715660.1\|6582289_6582733_+\|tail	phage tail protein	NA	NA	NA	NA
WP_009715659.1\|6582732_6583209_+	hypothetical protein	NA	NA	NA	NA
WP_159073685.1\|6586711_6586975_-	hypothetical protein	NA	NA	NA	NA
WP_063736020.1\|6586985_6587282_+	hypothetical protein	NA	NA	NA	NA
WP_009715656.1\|6587335_6587773_+\|tail	phage tail protein	NA	NA	NA	NA
WP_063736021.1\|6587773_6588544_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_063736022.1\|6588543_6590448_+	VgrG-related protein	NA	NA	NA	NA
WP_063736023.1\|6590447_6590936_+	GPW/gp25 family protein	A0A1D8KR06	Synechococcus_phage	2.9e-11	31.6
WP_063736024.1\|6590935_6592903_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_063736025.1\|6592899_6593472_+\|tail	phage tail protein	NA	NA	NA	NA
WP_063736026.1\|6593468_6595019_+	hypothetical protein	NA	NA	NA	NA
WP_107451209.1\|6595127_6595742_+	hypothetical protein	NA	NA	NA	NA
WP_107451210.1\|6595750_6596095_+	hypothetical protein	NA	NA	NA	NA
WP_063736028.1\|6596082_6596760_-	hypothetical protein	NA	NA	NA	NA
WP_009715648.1\|6596940_6597300_+	hypothetical protein	NA	NA	NA	NA
WP_159073686.1\|6597365_6597701_+	hypothetical protein	NA	NA	NA	NA
WP_079152521.1\|6597792_6598470_-	hypothetical protein	NA	NA	NA	NA
WP_063736045.1\|6598466_6599225_-	hypothetical protein	NA	NA	NA	NA
WP_063735286.1\|6599840_6600314_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_063735287.1\|6600342_6601530_-	FxsB family radical SAM/SPASM domain protein	NA	NA	NA	NA
WP_063735288.1\|6601546_6601738_-	hypothetical protein	NA	NA	NA	NA
WP_063735427.1\|6601864_6604630_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_063735289.1\|6604855_6605278_-	hypothetical protein	NA	NA	NA	NA
WP_063735428.1\|6605274_6605550_-	hypothetical protein	NA	NA	NA	NA
WP_063735290.1\|6605606_6606443_-	hypothetical protein	NA	NA	NA	NA
WP_063735429.1\|6606767_6607121_-	hypothetical protein	NA	NA	NA	NA
WP_063735291.1\|6607235_6607490_-	DUF397 domain-containing protein	NA	NA	NA	NA
WP_159073657.1\|6607486_6607606_-	DUF397 domain-containing protein	NA	NA	NA	NA
WP_063735292.1\|6608643_6609120_+	ATP-binding protein	NA	NA	NA	NA
WP_107451174.1\|6609107_6610619_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.4e-72	37.1
WP_079152436.1\|6610423_6611701_-	glycosyltransferase	NA	NA	NA	NA
WP_063735295.1\|6611943_6612150_-	hypothetical protein	NA	NA	NA	NA
WP_063735296.1\|6612459_6612756_+	GYD domain-containing protein	NA	NA	NA	NA
WP_063735298.1\|6613027_6613297_-	hypothetical protein	NA	NA	NA	NA
WP_063735299.1\|6613293_6615102_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_063735300.1\|6615098_6615710_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_009715635.1\|6615802_6616174_-	hypothetical protein	NA	NA	NA	NA
WP_063735301.1\|6616455_6617376_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_079152437.1\|6617765_6618491_+	arginase family protein	NA	NA	NA	NA
WP_063735303.1\|6618631_6620077_+	C4-dicarboxylate transporter DctA	NA	NA	NA	NA
WP_079152422.1\|6620076_6621210_+	glycerate kinase	W6LM47	Streptococcus_phage	1.6e-28	35.5
WP_063735304.1\|6621311_6622229_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_063735305.1\|6622397_6623492_+	tartrate dehydrogenase	NA	NA	NA	NA
WP_159073659.1\|6623498_6624719_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_063735306.1\|6624976_6625753_+	aminotransferase class IV family protein	NA	NA	NA	NA
WP_063735307.1\|6625755_6625989_-	hypothetical protein	NA	NA	NA	NA
WP_063735308.1\|6625999_6626881_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_079152438.1\|6627965_6628733_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_063735310.1\|6628726_6629548_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_154685946.1\|6629628_6629811_-	hypothetical protein	NA	NA	NA	NA
WP_039937948.1\|6630140_6630587_+	hypothetical protein	NA	NA	NA	NA
WP_063735311.1\|6630607_6631549_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_079152424.1\|6631634_6632984_+	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_063735312.1\|6633123_6633969_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_5

8888814 : 8900321

Streptomyces_phage(87.5%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063728980.1\|8888814_8889399_+	hypothetical protein	A0A1J0GW36	Streptomyces_phage	9.4e-33	42.7
WP_063728979.1\|8889420_8890971_+\|tail	phage tail sheath family protein	A0A1J0GW47	Streptomyces_phage	4.8e-100	35.5
WP_063728978.1\|8891083_8891332_+	hypothetical protein	A0A1J0GW41	Streptomyces_phage	1.1e-11	61.3
WP_064273646.1\|8891642_8891966_+\|tail	phage tail protein	A0A1J0GW41	Streptomyces_phage	2.5e-27	58.3
WP_159073500.1\|8891988_8892843_+	hypothetical protein	A0A1J0GW46	Streptomyces_phage	2.5e-42	39.5
WP_063728975.1\|8892995_8896454_+	hypothetical protein	A0A1J0GW44	Streptomyces_phage	1.0e-86	44.8
WP_063728974.1\|8896453_8897074_+	hypothetical protein	A0A1J0GW48	Streptomyces_phage	5.7e-20	37.1
WP_159073499.1\|8897070_8897346_+	hypothetical protein	NA	NA	NA	NA
WP_063728973.1\|8897410_8898508_+	hypothetical protein	NA	NA	NA	NA
WP_159073498.1\|8898510_8899191_+	hypothetical protein	NA	NA	NA	NA
WP_063728971.1\|8899202_8900321_+	hypothetical protein	A0A0D3MVF0	Staphylococcus_phage	9.9e-31	35.7

DBSCAN-SWA_6

8926811 : 8943160

Streptomyces_phage(68.75%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063728946.1\|8926811_8927873_+	hypothetical protein	A0A1J0GVZ1	Streptomyces_phage	1.1e-82	46.1
WP_159073494.1\|8927869_8928028_+	hypothetical protein	NA	NA	NA	NA
WP_063728945.1\|8928008_8928314_+	hypothetical protein	NA	NA	NA	NA
WP_063728944.1\|8928313_8928655_+	WhiB family transcriptional regulator	A0A1J0GVW3	Streptomyces_phage	5.1e-15	36.1
WP_159073493.1\|8928612_8929785_+	hypothetical protein	A0A1J0GVW6	Streptomyces_phage	2.4e-51	44.2
WP_159073492.1\|8929699_8930047_+	hypothetical protein	NA	NA	NA	NA
WP_063728940.1\|8930242_8930437_+	hypothetical protein	NA	NA	NA	NA
WP_063728939.1\|8930457_8931417_+	phosphoadenosine phosphosulfate reductase family protein	A0A1C9EIC6	Rhodococcus_phage	2.5e-67	47.0
WP_063728938.1\|8931593_8932061_+	hypothetical protein	NA	NA	NA	NA
WP_063728937.1\|8932233_8932899_+	hypothetical protein	A0A249XS09	Mycobacterium_phage	6.5e-30	42.7
WP_064273652.1\|8932895_8933078_+	hypothetical protein	A0A1J0GW02	Streptomyces_phage	1.1e-16	73.5
WP_063728935.1\|8933253_8933796_+	hypothetical protein	A0A1B3AYK5	Gordonia_phage	3.6e-10	30.2
WP_063728934.1\|8933788_8934298_+	hypothetical protein	A0A1B1IR19	uncultured_Mediterranean_phage	6.3e-25	47.0
WP_063728933.1\|8934294_8935074_+	hypothetical protein	A0A1J0MBM4	Mycobacterium_phage	3.6e-80	57.5
WP_063728932.1\|8935070_8935349_+	hypothetical protein	NA	NA	NA	NA
WP_159073491.1\|8935436_8935583_+	hypothetical protein	NA	NA	NA	NA
WP_063728931.1\|8935566_8936058_+	hypothetical protein	NA	NA	NA	NA
WP_159073490.1\|8936110_8936671_+	hypothetical protein	A0A1J0GVU8	Streptomyces_phage	9.0e-25	45.5
WP_063728929.1\|8936773_8937070_+	hypothetical protein	A0A1J0GVV0	Streptomyces_phage	3.2e-13	46.1
WP_063728928.1\|8937213_8937468_+	hypothetical protein	NA	NA	NA	NA
WP_064273654.1\|8937732_8938407_+	hypothetical protein	A0A1J0GVW0	Streptomyces_phage	2.6e-26	43.7
WP_063728925.1\|8938399_8938594_+	hypothetical protein	NA	NA	NA	NA
WP_063728924.1\|8938593_8938782_+	hypothetical protein	NA	NA	NA	NA
WP_079151824.1\|8938863_8939652_+	hypothetical protein	A0A1J0MCQ0	Streptomyces_phage	3.8e-37	48.6
WP_159402754.1\|8939723_8939879_+	hypothetical protein	NA	NA	NA	NA
WP_064273656.1\|8939878_8940214_+	hypothetical protein	A0A1J0GVV2	Streptomyces_phage	8.3e-18	44.0
WP_063728921.1\|8940236_8940614_+	hypothetical protein	NA	NA	NA	NA
WP_064273658.1\|8941308_8941761_+	hypothetical protein	A0A1J0GVV3	Streptomyces_phage	9.2e-20	38.7
WP_159073488.1\|8941757_8942243_+	hypothetical protein	NA	NA	NA	NA
WP_064273660.1\|8942254_8943160_+	hypothetical protein	A0A1J0GVT2	Streptomyces_phage	4.8e-68	46.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015726

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection