Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NZ_CP011483 | Helicobacter pylori strain DU15 chromosome, complete genome | 3 crisprs | cas14j,cas3,DEDDh | 0 | 0 | 1 | 0 |
1. NZ_CP011483
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_CP011483_1 | 366181-366380 | Orphan |
I-B
Consensus repeat of NZ_CP011483_1
|
3 spacers
spacers of NZ_CP011483_1
>1.1|366204|37|NZ_CP011483|CRISPRCasFinder GGTGTCGTTATCAAAGTTTAAACCTGTATTGTCAGTA >1.2|366264|34|NZ_CP011483|CRISPRCasFinder AGCGCTGTTTTCAAAAACAGATTGAGCGCTATTA >1.3|366321|37|NZ_CP011483|CRISPRCasFinder AGCACTGTTATTGAAGTTTAAGTTAGCGCTGTTAGTG |
CRISPR arrays and Neighbor proteins around NZ_CP011483_1
The CRISPR arrays of NZ_CP011483_1 >merge|NZ_CP011483|1|366181-366380|CRISPRCasFinder AAGCTATAAGTGCCTTGATTGAAGGTGTCGTTATCAAAGTTTAAACCTGTATTGTCAGTAAAATGATAAGTGCCTTGATTGAAAGCGCTGTTTTCAAAAACAGATTGAGCGCTATTAAAGTTGTAAGTCCCTTGATTGAAAGCACTGTTATTGAAGTTTAAGTTAGCGCTGTTAGTGAATTTGTAAGTCCCTTGATTGAA >NZ_CP011483|1|1|366181-366380|CRISPRCasFinder AAGCTATAAGTGCCTTGATTGAA GGTGTCGTTATCAAAGTTTAAACCTGTATTGTCAGTA AAATGATAAGTGCCTTGATTGAA AGCGCTGTTTTCAAAAACAGATTGAGCGCTATTA AAGTTGTAAGTCCCTTGATTGAA AGCACTGTTATTGAAGTTTAAGTTAGCGCTGTTAGTG AATTTGTAAGTCCCTTGATTGAA
>NZ_CP011483.1|WP_064430807.1|359659_359866_+|4-oxalocrotonate-tautomerase-family-protein MSFINIKLVPENGEPTNEQKQQLIEGVSDLMVKVLNKNKASVVVIIDEVDSNNYGLGGESVHHLRQKN >NZ_CP011483.1|WP_021301663.1|358932_359514_-|recombination-protein-RecR MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALRITHALENALENLKTCTSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA >NZ_CP011483.1|WP_064430806.1|357790_358936_-|tRNA-pseudouridine(13)-synthase-TruD MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEMLQIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTHNLQERNLKILSLNYHHNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGPQRFGKFNDNHQEGLKILQNQTKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIINAFSVKENLEFFKQKNLSVNPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKKALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFVENVTSQYVKEKAQFELGFYLPKGSYASALLKEIKHEKGENNDEF >NZ_CP011483.1|WP_172795850.1|356871_357822_-|zinc-metalloprotease-HtpX MRKEKIMTNFEKIIAQNRLKTNAVLATYCVIFAFIGLLVDVIRINANDLGTALFKLMTFQIFPTITMIMFLVAFIIIVVCIQNFSSIMLSGDEYKLIDSSKVLSSKENQIHRLLLELLEEANLHFEPKLYIIKAPYMNAFASGWNESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILWVLQIILPFITLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYKENDYKDTDTNSTRSAAYLFSTEMFSTHPSIKNRIQSLSRRVI >NZ_CP011483.1|WP_064430804.1|356328_356871_-|GTP-cyclohydrolase-I-FolE MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPKVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFWGNISLGYIPKEKIVGISAIAKLIEIYSRRLQIQERLTTQIAETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNVIIKTSVLKGLFKKDPKTRAEFIQLLKS >NZ_CP011483.1|WP_064430803.1|355401_356313_-|polyprenyl-synthetase-family-protein MSNPNLSFYHNECERFESFLNHHHLHLESFHPYLEKAFFEIVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLESRIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDSAKNSFVNLLGLEEASGYAQALKTEILNDLNLLKPAYPLLQENLNALLNTLFKGKT >NZ_CP011483.1|WP_064430802.1|354601_355405_-|5'/3'-nucleotidase-SurE MKKILLTNDDGYHAKGIQALEQALEEMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNIFTNGYPLKGRKLLNVNVPNCSLQEYKGECITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLEWQKRENEDRLSDFDAIASNHVSITPLNLDLTSYDDLKSLESWHKEMLK >NZ_CP011483.1|WP_000041797.1|353945_354605_-|hypothetical-protein MSKNHRLAFLGLIVGVLFFFSACQHRLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTSYYINVIVYELQKLGFYNVFTQAEFPLDKAKNVIYARIVRNISAVPFYQYNYQLIDQVNKPCYFLGGQFYCSQTPTDYYAINGFSEQILMSANSHFILDWYDVVLQKRVLYVDGSVSGRTCGYQMLYRDLIKSTIKRIDFNRPERYYYNLRLPLYQPCYRE >NZ_CP011483.1|WP_024115550.1|353339_353942_-|6-pyruvoyl-tetrahydropterin-synthase-family-protein MVIRRLYQFCASHVVRNCSSLKCAQNIHGHNYEVEVFIETNRLDSANMALDFGLMQQEMQVFIESFDHAHHFWDKESDEFQRFIENHCVRYVKCSFNLSAESYALMFLYYLTRILQKSVFSNNEGELKISSVRVHETKNGYAESFLKDLENPHFKSLVHNHCVSFSQGIQNLWHDKDFFNKIISDEKQCFFHAKPLHQIP >NZ_CP011483.1|WP_064430801.1|352587_353343_-|7-carboxy-7-deazaguanine-synthase-QueE MKLPVVESFFSLQGEGKRIGKPSLFLRLGGCNLSCKGFNCKTILHDEILTGCDSLYAVHPKFKETWDYYNEPKSLIERLEDLAPNYKHFDFILTGGEPSLYFNNPILISVLEHFYHKKIPLFVESNGSIFFEFSPILKELHFTLSVKLSFSLEEESKRINLKALQNILNNAKSVHFKFVLESKNAAQSIAEIQNLLKQLSLKNNEIFLMPLGATNKELDKNLKTLAPLALEHGFNLSDRLHIRLWDNQRGF >NZ_CP011483.1|WP_064430809.1|367232_368228_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase MKIFINGFGRIGRCVLRAILERSDNPQLEVIGINDPASWEILAYLLEHDSAHGLLNKEAHYSNHKLIVGSLEIPVFNSIKDLKGVDVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHSLYQNQAIVSNASCTTNAIAPICAILDKAFGIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKTLKEPINDLLIEASKGVLKGVLEIDLKEKVSSDFISNPSSVIIAPDLTFTLENMVKIMGWYDNEWGYSHRLVDMAQFMYHY >NZ_CP011483.1|WP_001240238.1|368371_369064_+|Bax-inhibitor-1/YccA-family-protein MALYDRANSHNAYAEDSLLHESELVGFVKTTYKFFAGSLLLATIGALLGLMNFQAVVQYKWVFFIAEIAALFGLMFSKSKPGLNLFMLFAFTSLSGVTLVPLLGMVIAKAGLGAIWQALGMTTIVFGLMSVYALKTKNDLANMGKMLFIALIVVVVCSLINLFLGSPMFQVVIAGASAILFSLYIAYDTQNIVKGMYDSPIDAAVDLYLDFLNVFISILQIIGIFSDRDK >NZ_CP011483.1|WP_064430810.1|369158_372416_+|carbamoyl-phosphate-synthase-large-subunit MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDLEFSHQTYIQPITPENIAAIIEKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEAIKKGEDRQAFKEAMLKIGMDLPRGRYAYSELEALEAINEIGFPAIIRASFTLAGGGSGVAYNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDSKDNCIIVCCIENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPKTLRMVVIEMNPRVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAFEKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEMIKKEIRRPNFKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVKAEESINSSVLTDAKKLRGLKNLGFSDARIAAKIKENDNLEVSPFEVELARMHLQIAPHFEEVDTCAAEFLSLTPYLYSTYAPNPLFPIENKQEKKEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIKSVMLNCNPETVSTDYDTSDTLYFEPIHFECVKSIIQREHVDGIIVHFGGQTPLKLAKDLAKMQAPIIGTPFKVIDIAEDREKFSLFLKELDIKQPENGMAKSVDEAYSIANVIGFPIIVRPSYVLGGQHMQILENIEELHHYLESVTHALEISPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGILQHIEEAGIHSGDSACFIPSTLSPKILDEIERVSAKIALHLGVVGLLNIQFAVHHNSLYLIEVNPRASRTVPFLSKALGVPLAKVATRVMVLKDLKEALKFYDKKNIVGYSKGVYKPKMPHFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARTLGLAFFKAQTACFNPIKNKGLIFVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVESLKVLKISEGRPNVMDLMMNGEISMAINTSDHKSQDDAKLIRASVLKNHVSYFTTLSAIEVLILALEESSKEDELLALQDYLV >NZ_CP011483.1|WP_064431575.1|372415_372847_+|hypothetical-protein MALVYLAQSDTTIGLLSKDSEKLNALKNRPKNKSVLIESTDFTTLKSLVRTPNAFKNLIRRSAKTTFIYPNSKAVRVVRGRHGDFLKRFKTLYSTSANLTQCAYDKEIASKLADVIVSDERGLFESSSSKIFRLYKDKKVRVR >NZ_CP011483.1|WP_064430811.1|373024_375460_+|TonB-dependent-receptor MNDKRFRKYWSFSLFLSLLGMFELEAKEEEKEERKTERKKDKKKNAQHTLGKVTTQAAKIFNYNNQTTISSKELERRQANQISDMFRRNPNINVGGGAVIAQKIYVRGIEDRLARVTVDGAAQMGASYGHQGNTIIDPGMLKSVVVTKGAAQASAGPMALIGAIKMETRSASDFIPKGKDYAMSGAVTFLTNFGDRETVMGAYRNNHFDVLLYYTHQNIFYYRDGDNATKDLFRPKADNKVTGSPSEQNNVMAKINGYLSERDTLTISYNMTRDNANRPLRANFTGTFLPYSCGDFNAFPNEKNPSDCLFENDASLFKTYSVNLVHNVSLNYEREGGSRFGDPKLKINGYTSIRNVQIDPLFRPNDIAAIIPFTPKLGGENECVAQGGIYDALKQTCSITFKSLGGGSVVANKNLFIINSGFNANVIHTIDHKNDNLFEYGLNYQNLTTFDKAIPNSELVKPGDAPDACLRVMGPNDPNMNGRCQRNGATANVVGVYAQANYTLHPMVTLGAGTRYDVYTLVDKDWQLHITQGFSPSAALNVSPLENLNFRLSYAYVTRGPMPGGLVWMRQDNLRYNRNLKPEIGQNVEFNTEYSSKYFDFRAAGFVQLISNYINQFSSTLFVTNLPAKDIIYVPGYEVSGTAKYKGFSLGLSVARSWPSLKGRLIADVYELAATTGNVFILTASYTIPRTGLSITWLSRFVTDLSYCSYSPYRNGPTDIDRRPSNCPKTPGIFHVHKPGYGVSSFFVTYKPTYKKLKGLSLNAVFNNIFNQQYIDQASPVMSPDEPNQDKYARGMAEPGFNARFEISYKF >NZ_CP011483.1|WP_064431576.1|375713_377258_+|outer-membrane-beta-barrel-protein-HofG MRQEKYFLTSSLSLLSFLLCPAEAFDYRFSGRVENFSKIGFNNSQINTKKGIYPTESFIDIVTLAQVKVNLLPKGTENHRLSFSLGGAIAAIPYDKTKNDINQANGKIFGSIVENFIGGYHGYFFNKYLGPAYAGTSQSASYHARPYVVDTAFLRYDYKDVFGFKAGRYEANIDFMSGSNQGWEVYYQPYKTETQRLRFWWWSSFGRGLAFNSWIYEFFATVPYLKKGGNPNNSNDFINYGWHGITTTYSYKGLDAQFFYYFAPKTYNAPGFKLVYDTNRNFENVGFRSQSMIMTTFPLYYRGWYNPETKTYSLEDSTPHGSLLGRNGVTLNIRQVFWWDIFNWSIGFYNTFGNSDAFLGSHTMPRGNNTSYISNEISVTTRHAGMIGYDFWDNTAYDGLADAITNANTFTFYTSVGGIHKRFAWHVFGRVSHANKNALGQVGRANEYSLQFNASYAFTESVFLNFRITYYGARINKGYQVGYFGAPKFNNPDGDFSANYQDRSYMMTNLTLKF >NZ_CP011483.1|WP_064430812.1|377795_379391_-|Hop-family-adhesin-AlpB MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNQVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSTTTNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTNNIHQCGATNNGSSGNGVAAAATTTSNSSCFQGNLSLYNEMVSSIKTLSQDLKNNIFQGNNNTTSQNLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNRAYGNGVTAQQIAYVLKQASITMGPSGNGGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVNTSQNALTLANNANISNSTGYQVSYGGNIDQARSTQLLNNTTNTLAKVSALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGILKKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF >NZ_CP011483.1|WP_064430813.1|379412_380960_-|Hop-family-adhesin-AlpA MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGTKRDELARELNADVTNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPEKLNGNDVSANALLGGAVGSGTCAAAGTAGGNSLNTQSACTAAGYYWLPSLSNRVLSTIGSQTNYGTNTNFPNMQQQLTYLNAANVFFNAMNKALEAKNGTSGTSGATGQNGQTYSQQAIQYLQGQQNILNNAANLLKQDELLLEAFNSAVAANIGNKEFNSAVFTGLVQGIIDQSQSVYNELNKNPISGSAVNSAGINSNQANAVQGRANQLSNALYNAQVTLDKINALNNQVRSMPYLPQFRAGNSRATNILNGFYTKVGYKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDMGFFSGIQLAGETFQSTLRDDPNVKLHGKVNNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTVEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF >NZ_CP011483.1|WP_064430814.1|381804_383835_-|ATP-dependent-helicase MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTNKASNEMIARVAKYSKLGSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKNALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSNKNPEHTPYAAFYENILDEFENTKKKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQRNERIYPKNLEVVKSGHFNKPALLNYSDNVVQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVPSKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSCISDIGSNTAKDIHEALMLLGNGDLKLALIQPDKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPKISLNGAKMLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFKKLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKDVYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPSVFLYEAGLLKPDLK >NZ_CP011483.1|WP_064430815.1|383844_384990_-|class-I-SAM-dependent-methyltransferase MEGFLYQLDIKTLGQVFTPKNIVDFMLTLKHNHGSVLKPSAGDGSFLKRLKKAVGIEIDPKICPKNALCMDFFDYSLENQFDTIIGNPPYVKHKDIAPSAKEKLNYSLFDERSNLYLFFIEKAIKHLKPKGELIFITPRDFLKSTSSVKLNEWIYKEGTITHFFELGDQKVFPNAMPNCVIFRFCKGNFSRITNDGLQFLCKKGILYFLNQSYTQKLSEVFKVKVGAVSGCDKIFKNEKYGNLEFVTSITKRTNVLEKMVFVNEPNDYLLQHKDSLMQRKIKKFNENNWYKWGRMHHISPKKRIYVNTKTRQKNPFFIHQCPNYDGSILALFPYNQNLDLQNLCDKLNAINWQELGFVCDGRFLFSQRSLENALLPKDFLN |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_CP011483_2 | 683868-684014 | Orphan |
NA
Consensus repeat of NZ_CP011483_2
|
2 spacers
spacers of NZ_CP011483_2
>2.1|683895|30|NZ_CP011483|CRISPRCasFinder CGAGTTCCCACTAAAATCCACTTGCTTGGC >2.2|683952|36|NZ_CP011483|CRISPRCasFinder CGAGTTGTTATTGAAAGCGTTTGTCTGCTCTGTGTG |
CRISPR arrays and Neighbor proteins around NZ_CP011483_2
The CRISPR arrays of NZ_CP011483_2 >merge|NZ_CP011483|2|683868-684014|CRISPRCasFinder ATTGAAATCAAACACCCCCCCATTGAACGAGTTCCCACTAAAATCCACTTGCTTGGCGTTGAAATTAAACGATCCGCCATTAAACGAGTTGTTATTGAAAGCGTTTGTCTGCTCTGTGTGGTTGAAATTAAACGAACCGCCATTAAA >NZ_CP011483|2|2|683868-684014|CRISPRCasFinder ATTGAAATCAAACACCCCCCCATTGAA CGAGTTCCCACTAAAATCCACTTGCTTGGC GTTGAAATTAAACGATCCGCCATTAAA CGAGTTGTTATTGAAAGCGTTTGTCTGCTCTGTGTG GTTGAAATTAAACGAACCGCCATTAAA
>NZ_CP011483.1|WP_000500917.1|675783_676539_+|ABC-transporter-permease MGAILSILKLEIKSYLTNTSALFWTFIYPILMLLLLIFVFSKNTTEIFYFNNIIGLMGLLIISSAIFGLTQAITSSRSHNIFLFYMLSPATFKQITLALIASRLIVVILYAFIFIVLSFYALNIITILNFKALILGFVSVFSSALFCFCLAIFVARIFQNEQSILGFCNIINLYALMSCNVFVPLEYLPNIGQLFIKTSIFYYLNQLLIKAFQGIDTILVLATSTFFIIGGIILFLLSANRMLLTPKERMR >NZ_CP011483.1|WP_064431003.1|675082_675784_+|ABC-transporter-ATP-binding-protein MISNISIHPKTMFKNALNIQDFSFKNHTSTAIIGTNGAGKSTLINTILGIREDYNVKAQNNNIPYHNSIIPQRKQLGVVSNLFNYPPGLSANDLLKFYQFFYKNCTLDLFEKNLLNKTYEHLSDGQKQRLKIDLALSHHPQLIIMDEPETSLEQNALIRLSNLISLRNTQQLTSIIATHDPIVLDSCEWVLLLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI >NZ_CP011483.1|WP_001922346.1|674486_674819_+|hypothetical-protein MEHHKVHTTIQALQAKRKKLLTELAELEAEIKVSSERRSSFNISLSPSLLAEIEEIEYEEKTSKERRINHSVLLSPSFMAKVDEYMKEKGFSNRSLLFEKALEFYMLKHP >NZ_CP011483.1|WP_064431002.1|672412_674386_+|NAD-dependent-DNA-ligase-LigA MIKSQKEYLERIEYLNTLSHHYYNLDDPIVSDALYDELYQELKAYEEKNPNNIQANSPTQKVGAITTNSFNKNPHLMRMWSLDDVFNQSELQAWLQRILKAYPSASFVCSPKLDGVSLNLLYQHGKLVKATTRGNGLEGELVSANAKHIANIPHAIAYNGEIEIRGEVIISKKDFDALNKERLNANEPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVGKHSLNFLSFKECLDFIVSLGFNSIQYLSLNKNHQEIEENYHTLIREREGFFALLDGMVIVVNELNIQKELGYTQKSPKFACAYKFPALEKHTKIVGVINQVGRSGAITPVAVLEPVEIAGAIITKATLHNYSEIEKKNIMLNDRVVVIRSGDVIPKIIKPLESYRDGSQHKIERPKICPICSHELLCEEIFTYCQNLNCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIFNALDLYALKLEDLMRLDKFKIKKAQNLLDAILKSKNPPLWRLINALGIEHIGKGASKTLARYGLNVLEKSEAEFLEMEGFGVEMARSLVNFYANNQEFIRSLFDLLNPKNSDMAKEKQESSSVFSHKTIVLTGTLSKPRQEYAQILENLGAKISSSVSAKTDFLIVGENAGSKLALAQKHGVSVLNEEELLKRLKEEFD >NZ_CP011483.1|WP_000251456.1|671393_672335_-|chemotaxis-protein-CheV MVRGIDKTTSLHLNNEAQFLCFRLDEEKDAQLYGLNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRWLHYNASDLSRNLKEYSVKDEHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEEGKISAITRFDKERVVQILDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGKELLDYLYEKEHYQQVGVVITDLEMPVISGFEVLKTIKADSRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSNILEIHEMLKKTLS >NZ_CP011483.1|WP_064431001.1|669625_671359_-|aspartate--tRNA-ligase MRSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALEVRSEFVLVAKGKVRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKNVNEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCSENDVMGVVEDLLQEIFKAIGHHISKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGDCFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKTDAKTGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK >NZ_CP011483.1|WP_064431000.1|669033_669609_-|adenylate-kinase MKQLFLIIGAPGSGKTTDAELIAKNNSEKIVHFSTGDLLRAESAKKTDRGLLIEKFTSQGELVPLEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSTQNEVVLKSVIEVKVSENTAKERVLGRSRGADDNEVVFHNRMRVFLDPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSFEH >NZ_CP011483.1|WP_064430999.1|668010_669009_-|glycosyltransferase-family-25-protein MICVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHQDFEKFVQELYDVQSMLKSDWFHSYVGAGLTLPELGCYLSHYLLWKECVKTNQPVVILEDDVALESNFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVFPPFDYPFKNNPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYSTHEKEALFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATERFKIIEPVDMFMDNSAYHDIANFTYVPCPVSLSEHSLDSTIQKPQKKSLKSYPPPPKKSTFKNLFYYSLNAKKRLKAFYKYSKQYAPLKTPKEV >NZ_CP011483.1|WP_064430998.1|667361_667958_-|glycosyltransferase-family-25-protein MIQVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHQDFEKFVQELYDAQSMLKSDWFHSDYCYQELLPREFGCYLSHYLLWKECVKTNQPVVILEDDTVLESNFMQALEDCLKSPFDFVRLYGHYWGGHKTNLCALPIYTEVEETDYIEAEAPIENHEVTPPPPIPHKIRNKILLMKRNKKNHLILAK >NZ_CP011483.1|WP_001047362.1|666206_666728_-|inorganic-diphosphatase MNLEKLEISHDANALCVVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAYQG >NZ_CP011483.1|WP_064431005.1|686306_686876_-|outer-membrane-beta-barrel-protein MKKIVFILALWAGLLGAFEPKKSHIYFGAMVGLAPIEITPKPVSDSSYTAFLWGAKGGYQFAFFKALALRGEFSYLMAIKPTTLHTINTSLLSLNADVLSDFYTYKKYSFGVYGGLGIGYFYQSNHLGMKNSLFMGYNGLFNVGLGSTINHHHRIELGAKIPFSNTRNSFKNSYFLESVFIHAAYSYAF >NZ_CP011483.1|WP_064431006.1|686872_689953_-|efflux-RND-transporter-permease-subunit-HefC MYKTAINRPITTLMFALAIVFFGTMGFKKLSVALFPKIDLPTVVVTTTYPGASAEIIESKVTDKIEEAVMGIDGIKKVTSTSSKNVSIVVIEFELEKPNEEALNDVVNKISSVRFDDSNIKKPSINKFDTDSQAIISLFVSSSSVPATTLNDYAKKTIKPMLQKIDGVGGVQLNGYRERQIRIYADPTLMNKYNLTYADLFSTLKAENVEIDGGRIVNSQRELSILVNANSYSVADVEKIQVGNHVRLGDIAKIEIGLEEDNTFASFKDKPGVILEIQKIAGANEIEIVDRVYEALKHIQAISPNYEIRPFLDTTGYIRTSIEDVKFDLVLGAILAVLVVFAFLRNGTITLVSAISIPISVMGTFALIQWMGFSLNMLTMVALTLAIGIIIDDAIVVIENIHKKLEMGMNKRKASYEGVREIGFALVAISAMLLSVFVPIGNMKGIIGRFFQSFGITVALAIALSYVVVVTIIPMISSVVVNPRHSRLYVWSEPFFKALESRYTKLLQWVLNHKLIIFIAVVLVFVGSLFVASKLGMEFMLKEDRGRFLVWLKAKPGVSIDYMTQKSKVFQKAIEKHAEVEFTTLQVGYGTTQNPFKAKIFVQLKPLKERKKEHELGQFELMSALRKELKSMPEAKGLENINLSEVSLIGGGGDSSPFQTFVFSHSQEAVDKSVANLKKFLLESPELKGKIEGYHTSTSESQPQLQLKILRQNANKYGVSAQTIGSVVSSAFSGTSQASVFKEDGKEYDMIIRVPDNKRVSVEDIKRLQVRNKYDKLMFLDALVEITETKSPSSISRYNRQRSVTVLAQPKAGISLGEILTQVSKNTKEWLVEGANYRFTGEADNAKETNGEFLIALATAFVLIYMILAALYESILEPFIIMVTMPLSFSGAFFALGLVHQPLSMFSMIGLILLIGMVGKNATLLIDVANEERKKGLNIQEAILFAGKTRLRPILMTTIAMVCGMLPLALASGDGAAMKSPIGIAMSGGLMISMVLSLLIVPVFYRLLAPIDDKIKRFYQNQKTLE >NZ_CP011483.1|WP_064431007.1|689965_690670_-|efflux-RND-transporter-periplasmic-adaptor-subunit-HefB MIRKILIGLFLSLLSLEAGDRVYAIFNVKAVQDSKLTLDSTGIVDSIKVTEGSVVKKGDVLLLLYNQDKQAQSDSTEQQLIFAKKQYQRYSKIGGAVDKNTLESYEFNYRRLESDYAYSIALLNKTILRAPFDGVIASKNIQVGEGVSANNTVLLRLVSHARKLVIEFDSKYINAVKVGDTYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK >NZ_CP011483.1|WP_064431588.1|690680_692114_-|efflux-RND-transporter-outer-membrane-subunit-HefA MKTIIRYVSLWGLCAALALAQTPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLPSPKETATTINQEIAKYHEKSDKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAMFLPTLDANYYFKNEARDTPNFKHYNTQQLQAQVKLNVFNGFSDVNNVKEKSATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSLKAQGNLSEYDILDMQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQISALKYQNKQLNYYPTIDVYDSWLFWIQKPAYALGGFGNFYPGQQNTAGVTASMKFFDDIGLSLQKQSIMLGRLANEKNLAYKKLEQEKDEQLYRKSLDIARAKIESSKASLDAANLSFANIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH >NZ_CP011483.1|WP_064431008.1|692138_693158_-|uroporphyrinogen-decarboxylase MIFIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNYVYDTISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPKVLKALLEKLSLELIEYLSLQIQAGVNAVMIFDSWASTLEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSIDGEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLYDKSALEEGVEKILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAKTRR >NZ_CP011483.1|WP_064431009.1|693226_693844_-|hypothetical-protein MIFRFFLILSLLKGVLLAKKDGDFFKPLEPTKKYFGSFKIGYLYQHAETIKRSPIRPKNRPPILMDKIYHDASLGFEAGYTLKKKILLGGYLDAGMGDSYFMSAGFMAGVRLFKGWVIPKIALGYQLQILGAKIDKYQFNIQSAVGSVGLFFNAAKNFGLSVEARGGIPFYFIQSKFSKAFGTPRLNIYSVSITFTFYDFTRFLG >NZ_CP011483.1|WP_064431010.1|693840_694497_-|3-methyladenine-DNA-glycosylase MLDSFEILKALKSLDLLKNAPAWWWPNALKFEALLGAVLTQNTKFEAVLKSLENLKNAFILENDDEINLKKIAYVDFSKLAECVRPSGFYNQKAKRLIDLSENILKDFQSFENFKQEATREWLLDQKGIGKESADAILCYVCAKEVMVVDKYSYLFLKKLGIEIEDYDELQNFFEKGVQENLNSALALYENTISLAQLYARFHGKIVEFSKQKLELKL >NZ_CP011483.1|WP_000885677.1|694614_696147_-|flagellin-A MAFRVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQANSLGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNQTGVKAYASVITTSDVAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDGRGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGAGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGSYAMSQANTVQQNILRLLT >NZ_CP011483.1|WP_082231397.1|696311_698093_+|ABC-transporter-ATP-binding-protein MQTPMDTIKNIPLRTFILLYKSSPKCVVLASITVLFVGILPSLNILVMIKLIDIVVNLLQKHTHFEYSLLLPTLLLWGALLFLTHVFSGILSSLQTIIAEQFSINIITHLANKLTQVKNLNFFENKDHTIKLNTIHNGLHIRPLNYVSNLFFNLQRIIGLISLFGILFSISICLPFIMIFATMPCILISNHIAKKHNASIDKLQDQKESMQNYLYSGLDNQKNKDNLLFNFMLNFHHKFIENKELYLNNFVKAAQKNLMFTIYTDVLTTILSIALFFLMVFIILSKSIGVGAIAGYIQAFSSTQQQLQDLSFYGKWFFAINKYFENYFCILDYKTPKLESQIRLEEKIHSITFENISFSYSNSKPIFENFNLSLSTNKIYALVGRNASGKSTLINLLLGFYTPNSGQIIINNKYPLQDLELNSYHQQISAVFQDFSLYAGYSIDDNLFMQNNITKEQLKQKREILKSFDENFQNCLNDYSNALFGAQYNGVDFSLGQKQRIATIRAFLKPSHCVVLDEPSSAIDPIIEKEFLDFIFKQSQSKMALIITHRMGSVRQANEIIVLDKGKLVEQGNFETLIKKQGLFSELYLKQQY >NZ_CP011483.1|WP_064431011.1|698164_699466_+|CZB-domain-containing-protein MFGNKQLQLQIHQKDSEITELKKEINLYQSLLNLCLHEGFVGIKNNKVVFKSGNLASLNNLEEQSVHFKENAESVNLQGVSYSLKSQNIDGVQYFSLAKKTGGVGEYHKNDLFKTFCASLKEGLENAQESMQYFHQETGLLLNAAKNGEEHSAEGLGTVNKTSQDIESLYEKMQNATSLADSLNQRSNEITQVISLIDDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQKATKEIAVVVKSMQQEANDIQTNTHDINSIVGSIKGDVEELKSTVKNNMIVAQAAKYTIYNVNNRVFCGLAKLDHVVFKNNLYGMVFGLNSFDITSHKNCRLGKWYYEGAGKENFSNTSGYRALESHHASVHAEANDLVRAVQEDHITDSKYLEHKVHLMEDSAKHVKENIDKMFYEKQDELNKIIEKIQKGE |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_CP011483_3 | 771274-771367 | Orphan |
NA
Consensus repeat of NZ_CP011483_3
|
1 spacers
spacers of NZ_CP011483_3
>3.1|771297|48|NZ_CP011483|CRISPRCasFinder AAGCGATATTTTAGCGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTC |
CRISPR arrays and Neighbor proteins around NZ_CP011483_3
The CRISPR arrays of NZ_CP011483_3 >merge|NZ_CP011483|3|771274-771367|CRISPRCasFinder AAAGATCTCCCTAAAGACTTACAAAGCGATATTTTAGCGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCA >NZ_CP011483|3|3|771274-771367|CRISPRCasFinder AAAGATCTCCCTAAAGACTTACA AAGCGATATTTTAGCGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTC AAAGATCTCCCTAAAGACTTGCA
>NZ_CP011483.1|WP_154806611.1|770081_770222_+|hypothetical-protein MNEENDKLETSKKTQQHSPQDLSNEETTEANHFEDSSKETKESSDH >NZ_CP011483.1|WP_064431052.1|768498_770067_+|type-IV-secretion-system-apparatus-protein-CagX MEQAFFKKIVGCFCLGYLFLSSVIEAAAPDIKNFNRGRVKVVNKKIAYLGDEKPITIWTSLDNVTVIQLEKDETISYITTGFNKGWSIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMTRDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQKAQKDKREKRKEERAKNRANLENLTNAMSNPQNLSNNKNLSEFIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQAEEAVKQRAKDKINIKTDKPQKSPEDNSIELSPSDSAWRTNLVVRTNKALYQFILRIAQKDNFASAYLTVKLEYPQRHEVSSVIEEELKKREEAKRQRELINQENLNTTAYINRVMMASNEQIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPRNYNYYLAPEKRSKHIMPSEIFDDGTFTYFGFKNITLQPAIFVVQPDGKLSMTDAAIDPNMTNSGLRWYRVNEIAEKFKLIKDKALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPLVRDK >NZ_CP011483.1|WP_017281238.1|766838_768446_+|cag-pathogenicity-island-VirB6-family-T4SS-protein-CagW MFNIKRTFLITIMSFFLIVPNWLKAIDLPIVSNLKIYQTVYCMLIPSYVLTNKSFADILTGYTSIGASGSGKSSGQGVIEALSTPLATSLAASNLVKYLNTLGPLWGSAWASVATAIQGFALTPSSGCNFGWNALINKNIDVSMDSMLDNLSNKIRNFTKGGIEDNVKGNVLLQIISSITAQASTNITADGLIWLIGKEFTANKLQNNATAMLAFAALESVVKGADAAVLPAYGVVNLPDIIIGQGSYLDFVSYLIYIVFGIFVFISFMKLRDISNGIQINIGFEYMRFVGGTLFKMAMVSFIAYAGFGYLYKISYSIYFGLAGAFGLNQVLFWALDLVLNYTVNSILPAVRAVFSNVGNNAPSLLQGLQVAGISLFAIFMQVTIIMRISTVVVKPLIAGAFSGIVFPIAVCLIVLDWFKDSMKNILIWFINNLFILVLAIPILLFGVLALLAFNLTITPSVAIQNINQGGLGIDSTIASLITLFILKGFIETIIESVNAIVNTIFSSVSMDGSRMDRERDALMVGRVGGSMFKG >NZ_CP011483.1|WP_000900762.1|766075_766834_+|cag-pathogenicity-island-type-IV-secretion-system-protein-CagV MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNIAAVASIVMMMPLKKTDIFVYGIDRYTGEFKIVKRSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQREKVKNSPLTRLTFFITIKITPDTMENYEYITKKQVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKIKEVESKNKALAK >NZ_CP011483.1|WP_001000460.1|765159_765807_-|cag-pathogenicity-island-translocation-protein-CagU MNDTTEHHGSNSLNAPSPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIEIEKLPQEKRYELLMQIGQAKQRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFLRTSKNTDLVESLKTKLKLQYFYYAFGAGAVLFFGLETIRSIYELYILGIGSTNDKVLFVLKNICFIGMGYLIYKVIKVIGIKNFINGLFTSKKQE >NZ_CP011483.1|WP_064431051.1|764301_765144_-|type-IV-secretion-system-apparatus-protein-CagT MKLRASVLIGATVLCLILSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTPFMVQVKLPNYKDYLLDNKQVVLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDFYLQPTLNQKGVVMIASNYNDNPNNKEKPQTFDVLQGSQPMLGANTKNLHGYDVSGANNKQVINEVAREKAQLEKINQYYKALLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSEIFKNGNLNMQAKEEEVREKLQEERENEYLRNQIRSLLSGK >NZ_CP011483.1|WP_064431050.1|763530_764121_+|cag-pathogenicity-island-protein-CagS MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAKNPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRDLLMKFDLEKYMQEKGV >NZ_CP011483.1|WP_080223124.1|762309_762690_-|cag-pathogenicity-island-protein MLSAKTRIRTQSKQELVQPKIKGLVMGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMTEVLKNGFGSMKNMGSALIGNGFSSSKLEKTANKMSVPQVKL >NZ_CP011483.1|WP_000437484.1|761082_761427_+|cag-pathogenicity-island-protein-CagP MEQPISKLKQNFLQFKHSFNKHLDKYSLYYRLFNISSIVIGFLIGLFSYGAGVILVYPILFLFALIIKPSFFYYTTYLLLLVSLSVISKYYLLSHANFTMKLIMLMTQWQNWFL >NZ_CP011483.1|WP_000879866.1|759529_760660_-|type-IV-secretion-system-apparatus-protein-CagM MLAKIVFGSLVAFGVLSANVEQFGSFFNEIKKEQEEVAAKEDALKAKKKLLNNTHDFLEDLIFRKQKIKELMDHRAKVLLDLENKYKKEKEALEKETRGKILTAKSKAYGDLEQALKDNPLYKKLLPNPYAYVLNQETFTKEDKERLSYYYPQVKTSSIFKKTTATTKDKAQALLQMGVFSLDEEQNKKASRLALSYKQAIEEYSNNISNLLSRKELDNIDYYLQLERNKFDSKAKDIAQKATNTLIFNSERLAFSMAIDKINEKYLKGYEAFSNLLKNVKDDVELNTLTKNFTNQKLSFAQKQKLCLLVLDSFNFDTQSKKSILKKTNEYNIFVDSDPMMSDKTTMQKEHYKIFNFFKTVLSAYRNNVAKNNPFE >NZ_CP011483.1|WP_064431053.1|773824_774424_+|cag-pathogenicity-island-translocation-protein-CagZ MELGFNETERQKILDSNRSLMGNANEIRDKFIQNYATSLKDSNDPQDFLRRVQELRINMQKNFISFDAYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGRKLNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNVE >NZ_CP011483.1|WP_000133871.1|774428_775421_+|cag-pathogenicity-island-type-IV-secretion-system-ATPase-VirB11 MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGNKVVWVLKNNGEWQPFDVRDKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRSSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNNAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIKHR >NZ_CP011483.1|WP_064431054.1|775429_777676_+|VirD4-family-type-IV-secretion-system-ATPase-Cag5 MEDFLYNTLYFIEDYKLVVIFSFIGLIALFFLYKFIKTQKKAFKDKANQPQKKKSFKEIIIDGLKERIKTFGFWLQAILLLSYSFITSGLFFLILLGNFYDDNRLPESDDDLFDIWIYAIQDFPAYYFKALCFSSLKIYGFNISLVVYSSILCSYIFITFFVWFLKYLTRTRDIGANKKVDDLFGSASWESEEKMIKAKLITPNNKKRAFDKREVIVGRRGLGDFIAYAGQAFIGLIAPTRSGKGVGFIMPNMINYPQNIVVFDPKADTMETCGKIREKRFNQKVFIYEPFSLKTHRFNPFAYVDFGNDVVLTEDILSQIDTRLKGHGMVASGGDFSTQIFGLAKLVFPERPNEKDPFFSNQARNLFVINCNIYRDLMWTKKGLEFVKRKKIIMPETPTMFFIGSMASGINLIDEDTNMEKVVSLMEFFGGEEDKSGDNIRVLSPATRNMWNNFKTMGGAKETYSSVQGVYTSAFAPYNNAMIRNFTSANDFDFRRLRIDEVSIGVIANPKESTIVGPILELFFNVMIYSNLILPIHDPQCKRSCLMLMDEFTLCGYLETFVKAVGIMAEYNMRPAFVFQSKAQLENDPPLGYGRNGAKTILDNLSLNMYYGINNDNYYEHFEKLSKVLGKYTRQDVSRSIDDNTGKTNTSISNKERFLMTPDELMTMGDELIILENTLKPIKCHKALYYDDPFFTDELIKVSPSLSKKYKLGKVPNQATFYDDLQAAKTRGELSYDKSLVPVGSSEL >NZ_CP011483.1|WP_064431055.1|777983_778493_-|transglycosylase-SLT-domain-containing-protein MFEKWIGLFLLLNSLAYPCQKVTISFKQYENLIHIHQKGCDNEVVCRTLISIALLESSLGLNNKREISLKDTSYSMFHITLNTAKKFYPTYSKTLLKYKLLNDVDFAISLAKRILKENFDYYKQKHPNKSVYQLVEMAVGAYNGGMKHNPNGAYVKKFRCVYSQVHYNE >NZ_CP011483.1|WP_064431056.1|778502_779948_-|type-IV-secretion-system-apparatus-protein-Cag3 MFRKLATAVSLIGLLISNTLYTKEISEADKVIKATKETKETKKEAKRLKKEARQRQQIPDHKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLRVPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTSDSATQKPNIIAPYSLYRLKETNNANEAQLSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPRTSNPDETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYYIKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSPLKDKLKYDKQKLQKALLKDSK >NZ_CP011483.1|WP_064431057.1|779940_780297_-|hypothetical-protein MIQRELNSASFYGCSNYINKGDCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYLKCKWIASVDSQDPKYPKCNGLMKRKKNFKNNEFFTDTSLTLKCNGILSLYQSEKKETNV >NZ_CP011483.1|WP_000785743.1|780404_780752_-|cag-pathogenicity-island-protein-Cag1 MADTINTTEATHETKKPNAFVNFFKNNLADKRYDSLGLIGAGVLCCVLSGAMGIVGIIFVAIGIFLSFSNINLVKLVEKLSKKQSKVATTVNNETQKSQATSVTNEPTEAKETKD >NZ_CP011483.1|WP_064431058.1|780889_781741_+|sel1-repeat-family-protein MFKDFYRTTFSFLKPLLLLWGLLLSFSLCIAGEYISISDDWDERARNQWDEIARNHKTYYFENGLDNFNKGQYQQAFKDFKTAQEYGIGLGSVYLAKMYMEGKGVKVDYKKAQFYAQNAIKGYGSGLLGGALILGRMQAQGLGMKKDLKQALKTYRYVVRIFSNKSTNFVNKFGSNLAEFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSVEFGYEKAMEAL >NZ_CP011483.1|WP_064431059.1|781819_782812_-|cell-shape-determining-L,D-carboxypeptidase-Csd6 MKKILPALLVGFVGLSADERLLEIMHLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIDNNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPLLSSYDKVLKGEKAFLITYEDKFFPSTKEELSMVLSSLFQWKEAWTRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFYSISVIPYPNSQNKRLFYVVFDQDYKAYQQNKLSYSSNSQKELYVEIENNQVSIIMEK >NZ_CP011483.1|WP_000849821.1|782808_783714_-|GTPase-Era MKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPGLHHQEKLLNQCMLSQALKAMGDAELCVFLASVHDDLKGYEEFLSLCQKPHILAVSKIDTATHKQVLQKLQEYQQYASQFLALVPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVVIDKFIEEERIDKVYAHIIVEKESQKKIVIGKNGVNIKRIGTSARLKMQEVGEKKVFLNLQVIAQKSWSKEEKSLQKLGYIYQRNRD |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DBSCAN-SWA_1 |
666206 : 674386
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NZ_CP011483|666206:674386|DBSCAN-SWA TTTAGCCTTGATAGGCTTTTATCGCTTTCTCTAAAACCTTAATCGCGCTCTCTTTGTTTTCAAACCCCTTGACTTTCACCCATTTATTAGGCTCTAAATCCTTGTAAGTTTCAAAAAAATGCTTGATTTTATCTAAAGTGTGTTTGGATAAATCATCAATATCTTTGACATAGGAATGCGTGGGATCGATCTTATCTATGGGTAGAGCGAGTAATTTTTCATCCATTCCGCTTTCATCTTCCATGTTCAAAACCCCAACCAAGCGCGCTTTCACCACGCTCCCGGCTTGAAAAGCCACATCGCTTAAAACAAGCGCATCTACAGGGTCGCCATCAGATCCTAAAGTGTTAGGCACAAAGCCATAATTGGCGGGGTAATTTTGTGCCCCATAAAGCACCCTATCCACCATTAAAGCCCCGCTTTCTTTATCCAGTTCATACTTGATATTAGAATGCTTGGATATTTCAATCACCACGCACAAAGCGTTAGCGTCATGGCTAATTTCTAGTTTTTCTAAATTCATTGCAATCTCCTTTGAATAATAAAAAAGACTTATTCTAACATAAAGCCCGCTCTTTTTAAACCTCTTTAGGGGTTTTTAAATGATTGTATCGTCTGCTGTATTTGTGAAACGCTCTCAAACACTTTCTGGTGTTTAATTGATGATAAAAAAGATTATCAAAATAAGATTTTTTAGGGGGCTTTAATTAAATATCAGGCTTTTTTGCATTTTGAATGGTGCTATTGAAAGCATGCTTACTTAAAGAAACAGGGCAAGGCACATAGGTAAAATTAGCAATATCATGGTAAGTGGGGTTGTTTATGAACATATCCACCGGCTCTATGATTTTAAAACGCTCCGTGGCTTCTATAAAAGTTTTAGCGCCCTTAGGCGTGAGATAGTAGCCTGCCGTAGTAGAAACATACACGCTAGTGAGGTAAAAATGCTCTAAAAAAAAGGCTTCTTTTTCGCTATCAGCACGCCTTTCCCAAAAGGTCTCTTTGATGTTTGCTTCTTTTGCCAATAAGGAAGCATCGTATTTTGCCACGAGTTTCTTATACACTTCTGTCCGAGCTAGAATATTTCCAATGAAGTGGTTGAGTTTTCTTTTAATTTTTTTAAAAACCACTTGATTAAAAGAGATTTTTGGGGGCGCTATTTTGCAAGGATCAGATGGTTCTTTTTGTTGCGTTTCATTAATAAAATCTTGTTGCGTATCTTGTGTGGAATTGGGGGGGGGGGGGTAACTTCATGGTTTTCAATAGGCGCTTCAGCTTCTATATAATCAGTCTCTTCAACCTCTGTATAGATAGGGAGAGCGCACAAATTGGTTTTATGGCCTCCCCAATAATGCCCATAAAGTCTCACAAAATCAAAAGGGCTTTTCAAGCAATCTTCTAAGGCTTGCATGAAGTTAGACTCTAGCACTGTATCATCTTCTAAAATGACGACCGGTTGGTTTGTTTTAACGCATTCTTTCCATAAAAGATAATGGCTTAAATAGCACCCAAATTCTCGGGGCAATAATTCTTGATAACAATAATCAGAATGGAACCAATCGGATTTTAACATGCTTTGCGCATCATAAAGCTCTTGAACGAATTTTTCAAAATCCTGATGTTTAGGGCTAATAGCGTCAAAGATTTGAAAAACACAACGCCCTTTAAATTTTTCATTGGATTCTAAAACGAGTTTTTCCGTATCCAAACGCCTTTGACTTTCTTTTAACGAGATGATATAAACTTGTATCAAATGAACTCCTAAATATGGTATTCCATTCTACCATAAAGTTTTTTCATTCTTTTTAAACCTCTTTAGGGGTTTTTAAAGGAGCGTATTGTTTGCTATATTTATAAAAGGCTTTTAAACGCTTTTTAGCGTTAAGGCTATAGTAGAAAAGATTCTTAAAAGTTGATTTTTTAGGCGGAGGCGGGTAAGATTTCAAGCTCTTTTTTTGGGGCTTTTGAATCGTGCTGTCTAAAGAATGCTCGCTTAAAGAAACAGGGCAAGGCACATAGGTAAAATTAGCAATATCATGATAAGCGGAATTATCCATAAACATATCCACCGGCTCTATGATTTTAAAACGCTCCGTGGCTTCTATAAAAGTTTTAGCGCCCTTAGGCGTGAGGTAGTAGCCGGCTGTAGAAGCCACATACACGCTGGTGAGGTAAAAATGCTCTAAAAATAACGCTTCTTTTTCATGCGTTGAGTAATAGCTTTTTTGTATTTTTTTGAGAATATAGTGGATGACTTTATGGGTAGAAAGATTTAAAAATCTAGAAACATCAAAAAATTTTTTAAATTTTTCTAAAATAGGGTTATTTTTAAAAGGATAATCAAAGGGAGGAAATACAAATTCTTTGGGTAAAACATGGAATTTTGTTTCGTGGTAATACCAATAGCACCCATAGAGTCTCACAAAATCAAAAGGGCTTTTCAAGCAATCTTCTAAGGCTTGCATAAAGTTAGATTCTAGCGCTACATCATCTTCTAAAATGACGACCGGTTGGTTTGTTTTGACGCATTCTTTCCATAAAAGATAATGGCTTAAATAGCACCCTAATTCAGGCAAAGTCAAACCAGCGCCAACATAAGAATGGAACCAATCGGATTTTAACATGCTTTGCACATCATAAAGCTCTTGAACGAATTTTTCAAAATCTTGATGTTTAGGGCTAATAGCGTCAAAGATTTGAAAAACACAACGCCCTTTAAATTTTTCATTGGATTCTAAAACGAGTTTTTCAGTATCCAAACGCCTTTGACTTTCTTTTAAAGAAATGATATAGACACAAATCACAACTATTCGCCTTGTTAGCCAACCTCAATGTTCAAAAGACAAAATATACTCTTGCATTTCATGCACGATTTCTTCAATACTTCTTTCGCCATTGATCGTTTTATACACCTTCTTATTCTTGTAAAAATTTTGGATTTCACCCAACGGATCCAAAAACACCCGCATGCGGTTATGAAACACCACCTCATTGTCATCAGCTCCCCTAGAGCGCCCTAAAACCCTTTCTTTAGCGGTGTTTTCACTCACTTTTACTTCAATCACGCTTTTTAAAACCACTTCGTTTTGAGTGCTCAATTCCTTATCCAAAGCTTGCATTTGTTCCACGCTCCTAGGGTAGCCATCAATTAAAATGATCCCTTTATCAGAGCTTTTAATCGCTGAAAGGATCGTTTCTACCACAATTTCTAAAGGCACCAATTCGCCTTGAGAAGTGAATTTCTCAATCAATAAGCCTCGATCGGTCTTTTTAGCACTCTCAGCCCTTAGTAAATCCCCGGTAGAAAAATGAACGATTTTTTCGCTATTATTCTTAGCGATAAGCTCTGCATCAGTGGTTTTACCACTCCCTGGGGCTCCAATAATCAAAAATAGTTGTTTCATGTCTTATCCTTTCAAATTATTTTCTTAAGCGAATGTGTAATTCTCTTAGTTGCTCTTCATTAATGGGGCTAGGAGCGTCAGTCAATAAACATGAAGCTTTTTGCGTTTTAGGGAAAGCGATCACATCTCTAATGCTACTGGATTTGGTCATTAGCATGATCAAGCGATCAAAACCTATCGCAAAGCCCCCATGAGGAGGAGCACCAAACTTTAGAGCTTCTAATAAAAAGCCAAATTTCTTTTGTGCTTCCTCTTCGTTGATATTGATTTTTTCAAAGACTTTTTTTTGCATTTCTTCTTTATGAATCCTAATACTCCCCCCACCAAGCTCCACGCCATTAAGCACCACATCATACGCATGTGCTTCAATCTCTTCTATATCTTCGCATTCTATATTTTTAGGCATCGTAAAAGGGTGGTGCGCGGCGTGATAGCCGTTTTCAGTTTTTTCAAACATGGGGAAATTGACTACCCATAAGAAATTCAAAGCGTCTTTATCAATCAAATCAAGCGTTTCAGCCACTTTCAAGCGTAAGCGCCCCATGTAATCTAACACGATTTTTTTATCCCCGGCTCCAAAAAAGACAATATCCCCGGTTTTTGCATCAGTTTTTTCTAAAATATTCTTAAGCCCCTTTTCGCTTAAAAATTTAACTAAAGGCCCTTTAATTCCATCTTCTTTAATTTGCAAATACGCTAAGCCTTGAGCCCCAAATTGGCGCACAAATTCTTCTAATTCTTTTAAAACGCTGCGGCTAAAAATTGCATCAGCCCCCTTAACATTCAAAGCTTTAATGCGTTTGTTTTTAGGATCTTGCGCGATATTAGAAAAAATAGCGTTTGAGCTGTCCATAAAACAATCCCCCACTTCTATTAAAGGCAATCCAAAGCGTAAATCCGGCTTATCGCTCCCGTAATTTTCCATCGCTTCCTTATAAGGCATGCGTTTAAAAGGTTTAGAAATATGATGCCCAATCGCTTTAAAAATCTCTTGCAACAAATCTTCCACCACGCCCATCACATCATTTTCACTACAAAAACTCATTTCCGCATCAATTTGCGTGAATTCTGGCTGCCTGTCCGCTCTCAAATCTTCATCCCTAAAGCAACGAGCGATTTGAAAATACCTATCCATTCCCCCCACCATTAAAAGCTGTTTGAACAATTGCGGGCTTTGAGGGAGCGCGAAAAATTCACCCTCATGCACCCTGCTTGGTACTAAATAATCCCTAGCCCCCTCAGGCGTGGTTTTAGACAAAATGGGGGTTTCAATCTCTAAAAAGCCCTTTTGGGCTAAAGTGTTACGAGCGATTAAAGCCACTTCGCTGCGCAATTTAAAGATTTCATAAGCATTCAAAGAGCGCAAATCCAAATAGCGGTATTTCAAACGCAAATCTTCATTCACATTTTTATTGCCAATTTCAATCGGTGGGGTAGCGCTTTTATTTTCAATGACTAACTCTTCTAAAACAATTTCAATTTTACCGGTCTTTAGTTTAGGGTTTTCTAAACCGGGCCCTCTTAAACGCACTTTTCCTTTAGCCACTAGCACAAATTCACTCCTAACTTCTAAAGCCCTTTCATAAGCCTTAGAGCTAGGATCACAGACTAGTTGCACTAAACCGCTTTTATCCCTTAAATCAATAAAAACCACGCCTCCATGGTCTCTATAAGTGTTACACCACCCAGCCACTTTGATGGTTTTACCCACATCTTTTTCACTAATTTCTGCACAGAAATGACTTCGCATGTTTTATCCCTTTAAATTAAAACAAAAATTAAATTTATGAAAGCGTTTTTTTAAGCATTTCATGGATTTCAAGAATGTTAGATTTTACCACAAAACCATCCGCTTCTAAAGATTGGGCTAATTGGCGGTTAGAATCGCTGCTCATGGACGAATTGATAATCACAGGAAGATGCTCAGTCCTGCTATCAGCTTTAATGGTTTTTAACACTTCAAACCCTGAAATAACAGGCATTTCTAAATCCGTAATGACCACGCCGACCTGTTGGTAATGTTCTTTTTCATACAAATAATCCAACAATTCTTTCCCGTTTGGAAAGGCTAGATAACGCAATTCTAAAGTTTGAACGATTTTTTCTAGGGTTTTAAGAGCGCTCAAGGAGTCTTCAGCGATTAAAATGAGTTTTTGGCTTTGAATGGCTTCTATGCAACGCAAAGTCAAATCGTCCAAATCTTTCAAGCTAGGGAAAACATCGCTAATCATCTTTTCCACATCTAAGATCTGCACCACCCGTTCTTTATCAAAACGAGTGATAGCGCTAATCTTACCCTCTTCATTAATGCCTTGTTTGTCCCCAGCACTAATCTCAGTCCAATTTTTATGGATGATCCTTTCAATTTTTAAAACCTTTAGAGCGATGGAGTGGTTAGAAAAATGGCACACAATCACCAAATTATGCTCATCTTTAACGCTGTATTCTTTTAGATTGCGACTCAGATCACTAGCGTTATAATGCAACCACCTTTTCACATCCACTAAAGGGATAGACTCGCCCCTAACGCTAAGAAATCCAAGCATCACGCCATCGCTCCCCCCAAGAATCTCTGTAACCTCCCCATCATAATGGATAATTTCTCGGATCTTAAAAATGTTTAAGCCATAAAGTTGGGCGTCTTTTTCTTCATCTAACCTAAAACACAGAAATTGCGCTTCATTGTTTAAGTGCAACGAAGTCGTTTTGTCAATGCCTCTTACCACCTGATTTCCCCTAAAGCCCTATCAAAGATTAAATGTTATAATACTACCCTAATTTAGTTTAAAAGGTTTTTACAAACATGATAAAAAGCCAAAAAGAGTATTTAGAAAGAATTGAATATTTAAACACCCTATCGCACCATTATTACAACCTTGATGATCCCATCGTAAGCGATGCGCTCTATGATGAACTTTATCAAGAATTAAAAGCTTATGAAGAAAAAAACCCTAATAACATTCAAGCCAATTCCCCTACCCAAAAAGTGGGGGCTATTACCACCAATTCGTTCAATAAAAACCCCCATTTAATGCGGATGTGGAGCTTAGATGATGTGTTCAATCAAAGCGAATTGCAAGCGTGGTTGCAACGCATTTTAAAAGCCTATCCTAGCGCTTCGTTCGTGTGTTCGCCCAAACTTGATGGGGTTTCGCTCAATCTTTTGTATCAACATGGCAAGCTAGTGAAGGCGACCACTAGGGGCAACGGCTTAGAAGGGGAATTAGTGAGCGCAAACGCTAAACACATCGCTAATATCCCCCACGCTATCGCTTATAATGGAGAAATAGAAATCAGGGGCGAAGTGATCATTTCTAAAAAGGATTTTGACGCTTTAAACAAAGAGCGCTTAAACGCTAATGAACCCCTATTCGCTAACCCTAGAAATGCCGCATCAGGGAGTTTGAGGCAGCTTGATAGCGAAATCACTAAAAAGCGTAAATTGCAATTCATTCCTTGGGGCGTGGGCAAGCATTCTTTAAATTTCCTAAGCTTTAAGGAGTGTTTGGATTTTATTGTTTCGCTAGGTTTTAATTCTATTCAATACTTAAGCCTGAACAAAAATCACCAAGAAATAGAAGAAAATTACCACACCCTGATTAGAGAAAGGGAGGGCTTTTTCGCCCTTTTAGACGGCATGGTGATCGTTGTGAATGAATTAAATATTCAAAAGGAGTTAGGCTACACGCAAAAATCCCCCAAATTCGCTTGCGCTTATAAATTCCCGGCTCTAGAAAAACACACAAAAATTGTAGGAGTCATTAACCAAGTGGGGCGCAGTGGTGCAATCACACCGGTCGCTGTTTTAGAGCCTGTAGAAATTGCTGGAGCTATCATTACGAAAGCGACCTTACACAATTATTCTGAAATTGAAAAAAAGAATATCATGCTCAATGATAGGGTTGTTGTCATTAGAAGCGGCGATGTGATCCCTAAAATCATCAAACCTTTAGAATCTTATAGGGACGGCTCGCAACATAAAATTGAACGCCCCAAAATTTGCCCTATATGTTCGCATGAGCTTTTATGCGAAGAGATTTTTACTTATTGTCAAAACCTTAACTGCCCGGCAAGATTGAAAGAAAGCTTGATTCATTTCGCTTCTAAAGACGCTTTAAACATTCAAGGCCTAGGCGATAAAGTCATAGAGCAACTTTTTGAAGAAAAACTCATTTTTAACGCTCTGGATTTGTATGCTTTAAAATTAGAAGATTTAATGCGGCTAGACAAATTCAAAATCAAAAAAGCTCAAAATCTATTGGACGCTATTTTAAAAAGCAAAAACCCTCCCTTATGGCGTTTGATTAACGCTTTAGGGATTGAGCATATTGGCAAGGGAGCGAGTAAAACGCTGGCTAGATACGGCTTAAATGTGTTAGAAAAAAGCGAAGCCGAATTTTTAGAAATGGAAGGCTTTGGGGTGGAAATGGCGCGCTCTTTAGTCAATTTTTATGCGAACAATCAGGAATTTATCCGATCGTTATTTGATTTGTTGAACCCTAAAAACAGCGATATGGCCAAAGAAAAGCAAGAAAGCTCTTCTGTTTTCAGTCATAAAACGATTGTTCTAACCGGCACGCTTTCTAAACCACGGCAAGAATACGCTCAAATTTTAGAAAATTTAGGGGCAAAAATTTCTTCAAGCGTGAGCGCTAAAACCGATTTTTTAATCGTTGGAGAAAACGCCGGCTCAAAACTCGCTCTAGCACAAAAACATGGCGTGAGCGTTTTGAATGAAGAAGAATTGTTAAAACGCCTTAAAGAAGAATTTGATTGA
Protein sequences of DBSCAN-SWA_1 >NZ_CP011483|666206:674386|669033_669609_-|WP_064431000.1|DBSCAN-SWA MKQLFLIIGAPGSGKTTDAELIAKNNSEKIVHFSTGDLLRAESAKKTDRGLLIEKFTSQGELVPLEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSTQNEVVLKSVIEVKVSENTAKERVLGRSRGADDNEVVFHNRMRVFLDPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSFEH >NZ_CP011483|666206:674386|666206_666728_-|WP_001047362.1|DBSCAN-SWA MNLEKLEISHDANALCVVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAYQG >NZ_CP011483|666206:674386|672412_674386_+|WP_064431002.1|DBSCAN-SWA MIKSQKEYLERIEYLNTLSHHYYNLDDPIVSDALYDELYQELKAYEEKNPNNIQANSPTQKVGAITTNSFNKNPHLMRMWSLDDVFNQSELQAWLQRILKAYPSASFVCSPKLDGVSLNLLYQHGKLVKATTRGNGLEGELVSANAKHIANIPHAIAYNGEIEIRGEVIISKKDFDALNKERLNANEPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVGKHSLNFLSFKECLDFIVSLGFNSIQYLSLNKNHQEIEENYHTLIREREGFFALLDGMVIVVNELNIQKELGYTQKSPKFACAYKFPALEKHTKIVGVINQVGRSGAITPVAVLEPVEIAGAIITKATLHNYSEIEKKNIMLNDRVVVIRSGDVIPKIIKPLESYRDGSQHKIERPKICPICSHELLCEEIFTYCQNLNCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIFNALDLYALKLEDLMRLDKFKIKKAQNLLDAILKSKNPPLWRLINALGIEHIGKGASKTLARYGLNVLEKSEAEFLEMEGFGVEMARSLVNFYANNQEFIRSLFDLLNPKNSDMAKEKQESSSVFSHKTIVLTGTLSKPRQEYAQILENLGAKISSSVSAKTDFLIVGENAGSKLALAQKHGVSVLNEEELLKRLKEEFD >NZ_CP011483|666206:674386|671393_672335_-|WP_000251456.1|DBSCAN-SWA MVRGIDKTTSLHLNNEAQFLCFRLDEEKDAQLYGLNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRWLHYNASDLSRNLKEYSVKDEHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEEGKISAITRFDKERVVQILDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGKELLDYLYEKEHYQQVGVVITDLEMPVISGFEVLKTIKADSRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSNILEIHEMLKKTLS >NZ_CP011483|666206:674386|667361_667958_-|WP_064430998.1|DBSCAN-SWA MIQVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHQDFEKFVQELYDAQSMLKSDWFHSDYCYQELLPREFGCYLSHYLLWKECVKTNQPVVILEDDTVLESNFMQALEDCLKSPFDFVRLYGHYWGGHKTNLCALPIYTEVEETDYIEAEAPIENHEVTPPPPIPHKIRNKILLMKRNKKNHLILAK >NZ_CP011483|666206:674386|668010_669009_-|WP_064430999.1|DBSCAN-SWA MICVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHQDFEKFVQELYDVQSMLKSDWFHSYVGAGLTLPELGCYLSHYLLWKECVKTNQPVVILEDDVALESNFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVFPPFDYPFKNNPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYSTHEKEALFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATERFKIIEPVDMFMDNSAYHDIANFTYVPCPVSLSEHSLDSTIQKPQKKSLKSYPPPPKKSTFKNLFYYSLNAKKRLKAFYKYSKQYAPLKTPKEV >NZ_CP011483|666206:674386|669625_671359_-|WP_064431001.1|tRNA|DBSCAN-SWA MRSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALEVRSEFVLVAKGKVRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKNVNEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCSENDVMGVVEDLLQEIFKAIGHHISKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGDCFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKTDAKTGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK |
7 | Synechococcus_phage(33.33%) | tRNA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
|
| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
|---|