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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011525 Pseudomonas sp. JY-Q chromosome, complete genome 1 crisprs csa3,DEDDh,WYL,RT,cas3,DinG 0 0 14 0

Results visualization

1. NZ_CP011525
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011525_1 244938-245020 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 555966 : 627516 56 uncultured_Caudovirales_phage(13.33%) transposase,tRNA,protease,integrase attL 544388:544403|attR 631628:631643
DBSCAN-SWA_2 731906 : 773571 41 Paenibacillus_phage(16.67%) transposase NA
DBSCAN-SWA_3 863355 : 898967 29 Leptospira_phage(16.67%) transposase NA
DBSCAN-SWA_4 911862 : 975920 49 Staphylococcus_phage(23.08%) tRNA,integrase,transposase,protease attL 917728:917744|attR 941751:941767
DBSCAN-SWA_5 1590583 : 1639128 63 Pseudomonas_phage(48.72%) portal,integrase,tail,tRNA,capsid,holin,transposase,head,terminase attL 1588701:1588745|attR 1644699:1644743
DBSCAN-SWA_6 2250443 : 2262271 25 Pseudomonas_phage(42.86%) NA NA
DBSCAN-SWA_7 2266240 : 2322962 72 Pseudomonas_phage(57.78%) integrase,head,terminase,coat attL 2268784:2268798|attR 2309668:2309682
DBSCAN-SWA_8 2893952 : 2943602 42 Serratia_phage(40.0%) transposase,plate,protease NA
DBSCAN-SWA_9 3567547 : 3577823 14 uncultured_Caudovirales_phage(44.44%) NA NA
DBSCAN-SWA_10 3637485 : 3691888 47 Bacillus_phage(28.57%) transposase,plate NA
DBSCAN-SWA_11 3983253 : 3991926 11 uncultured_Caudovirales_phage(75.0%) tRNA NA
DBSCAN-SWA_12 4724199 : 4765949 28 Escherichia_phage(37.5%) transposase NA
DBSCAN-SWA_13 5039691 : 5047469 10 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_14 5764657 : 5812500 40 uncultured_Caudovirales_phage(28.57%) holin,transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage