CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014627	Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence	0 crisprs	NA	0	0	2	1
NZ_CP014630	Lactobacillus backii strain TMW 1.1988 plasmid L11988-6, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP014628	Lactobacillus backii strain TMW 1.1988 plasmid L11988-4, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP014624	Lactobacillus backii strain TMW 1.1988 plasmid L11988-1, complete sequence	0 crisprs	NA	0	0	2	0
NZ_CP014623	Lactobacillus backii strain TMW 1.1988 chromosome, complete genome	3 crisprs	cas3,csa3,cas9,cas1,cas2,DinG,DEDDh,cas14j,WYL	8	12	6	0
NZ_CP014632	Lactobacillus backii strain TMW 1.1988 plasmid L11988-8, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP014626	Lactobacillus backii strain TMW 1.1988 plasmid L11988-2, complete sequence	0 crisprs	NA	0	0	4	0
NZ_CP014629	Lactobacillus backii strain TMW 1.1988 plasmid L11988-5, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP014633	Lactobacillus backii strain TMW 1.1988 plasmid L11988-9, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP014631	Lactobacillus backii strain TMW 1.1988 plasmid L11988-7, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP014625	Lactobacillus backii strain TMW 1.1988 plasmid L11988-10, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2914

Streptococcus_phage(50.0%)

integrase

attL 964:977|attR 6500:6513

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068226380.1\|259_1510_-	MFS transporter	A0A1B0RXG2	Streptococcus_phage	9.0e-57	33.8
964:977	attL	NA	NA	NA	NA
WP_056947047.1\|1613_1970_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_003586674.1\|1969_2248_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_012660357.1\|2326_2914_+\|integrase	site-specific integrase	A0A0S2GLG4	Bacillus_phage	1.8e-20	33.2
6500:6513	attR	NA	NA	NA	NA

DBSCAN-SWA_2

7295 : 15370

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068226388.1\|7295_8102_-	ParA family protein	A0A1V0DZZ0	Clostridioides_phage	1.5e-20	29.4
WP_068226390.1\|8628_9036_+	hypothetical protein	NA	NA	NA	NA
WP_068226392.1\|9307_10210_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010619295.1\|10394_11420_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.6e-40	35.2
WP_014940888.1\|11544_12126_-	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	7.2e-33	45.1
WP_068226393.1\|12745_13933_+	RepB family plasmid replication initiator protein	NA	NA	NA	NA
WP_068226394.1\|13937_14156_+	hypothetical protein	NA	NA	NA	NA
WP_068226395.1\|14143_15370_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	1.8e-30	28.1

Anti-CRISPR protein detection

Acr_ID: NZ_CP014627.1|WP_003586674.1|1969_2248_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP014627.1|WP_003586674.1|1969_2248_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin

1969_2248_-

92 aa aa

0-2914

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP014623_2	TypeII	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	535-564	0

1. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014627 position: 535-564, mismatch: 0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

2. NZ_CP014633

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1493 : 8847

Lactobacillus_phage(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068226453.1\|1493_2078_+	recombinase family protein	M4QQC6	Vibrio_phage	5.9e-19	42.1
WP_068226454.1\|2334_2544_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_068226455.1\|2584_3427_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	6.3e-155	97.9
WP_056986488.1\|3467_3731_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	3.2e-33	96.0
WP_054712567.1\|3979_4903_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	7.4e-32	31.7
WP_065868919.1\|4958_5435_-	universal stress protein	NA	NA	NA	NA
WP_068226456.1\|5586_6516_+\|transposase	IS30-like element ISLpl1 family transposase	H7BW47	unidentified_phage	3.0e-25	34.4
WP_068226457.1\|6732_8847_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	1.5e-117	38.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP014626

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 12229

uncultured_Mediterranean_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068226348.1\|2500_4468_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_023062170.1\|4571_6839_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	3.3e-126	30.9
WP_068226350.1\|7122_7683_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_003596522.1\|7694_7880_+	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_068226352.1\|7907_8450_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_068226354.1\|8464_8716_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003681696.1\|8727_8868_+	hypothetical protein	NA	NA	NA	NA
WP_068226356.1\|9072_10092_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.7e-43	35.4
WP_068226317.1\|10136_10538_+	transcriptional regulator Spx	NA	NA	NA	NA
WP_003636336.1\|11647_12229_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	7.2e-33	45.1

DBSCAN-SWA_2

18030 : 24826

Lactobacillus_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010010558.1\|18030_18837_-	AAA family ATPase	F0PIG8	Enterococcus_phage	1.1e-60	46.8
WP_068226360.1\|19675_19954_+	BRCT domain-containing protein	NA	NA	NA	NA
WP_035168888.1\|20135_20336_+	hypothetical protein	NA	NA	NA	NA
WP_046872572.1\|20348_20723_+	DUF536 domain-containing protein	NA	NA	NA	NA
WP_068226362.1\|21285_22026_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	2.0e-136	98.8
WP_032760944.1\|22079_22295_-\|transposase	transposase	Q6J1X3	Lactobacillus_phage	4.2e-31	97.2
WP_004270929.1\|22436_23468_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.8e-42	34.4
WP_068226378.1\|23872_24826_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.2e-05	24.3

DBSCAN-SWA_3

29678 : 32266

Paramecium_bursaria_Chlorella_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016265827.1\|29678_30341_+	beta-phosphoglucomutase	A7ITQ4	Paramecium_bursaria_Chlorella_virus	1.7e-09	25.8
WP_004270929.1\|31234_32266_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.8e-42	34.4

DBSCAN-SWA_4

37476 : 40300

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068226371.1\|37476_38688_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	1.3e-12	32.2
WP_068226374.1\|38677_40300_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.3e-127	50.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP014624

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 17235

Lactobacillus_phage(40.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002819873.1\|681_963_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_062916866.1\|1215_1524_-	hypothetical protein	NA	NA	NA	NA
WP_016511697.1\|2937_3738_+	ParA family protein	F0PIG8	Enterococcus_phage	2.7e-67	50.6
WP_016511698.1\|3739_4087_+	hypothetical protein	NA	NA	NA	NA
WP_068226303.1\|4351_5194_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	2.0e-156	98.9
WP_002816285.1\|5247_5499_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
WP_068226304.1\|5804_7841_-	KUP/HAK/KT family potassium transporter	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	8.0e-63	33.4
WP_068226305.1\|8103_8463_+	hypothetical protein	NA	NA	NA	NA
WP_068226306.1\|8547_9135_-	recombinase family protein	A0A219YA40	Aeromonas_phage	1.1e-17	35.0
WP_068226307.1\|9244_10324_-	FRG domain-containing protein	Q9AZ51	Lactococcus_phage	2.4e-05	59.5
WP_006293514.1\|10602_10707_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_041142890.1\|10994_12386_+	MFS transporter	NA	NA	NA	NA
WP_068226308.1\|12385_13048_+	phosphohydrolase	V9SGZ2	Tunisvirus	1.3e-09	29.3
WP_002816285.1\|13213_13465_+\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
WP_068226309.1\|13518_14361_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	2.5e-156	98.9
WP_068226310.1\|14546_15542_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_062913495.1\|15555_16146_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
WP_062913494.1\|16142_16511_+	PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM	NA	NA	NA	NA
WP_068226311.1\|16524_17235_+	aquaporin family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	3.0e-17	27.6

DBSCAN-SWA_2

22559 : 42221

Enterococcus_phage(22.22%)

transposase,integrase

attL 35067:35084|attR 37613:37630

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057808145.1\|22559_23807_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.0e-39	30.2
WP_156521553.1\|24167_24954_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_057878257.1\|26557_27358_+	AAA family ATPase	F0PIG8	Enterococcus_phage	1.9e-52	41.6
WP_011222016.1\|27359_27710_+	DUF5388 domain-containing protein	NA	NA	NA	NA
WP_068226316.1\|28271_29300_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.7e-43	35.4
WP_068226317.1\|29449_29851_+	transcriptional regulator Spx	NA	NA	NA	NA
WP_068226321.1\|30960_31542_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	5.5e-33	45.1
WP_156521554.1\|31794_32064_-	hypothetical protein	NA	NA	NA	NA
WP_068226322.1\|33402_34236_+	AAA family ATPase	F0PIG8	Enterococcus_phage	4.0e-53	42.8
WP_057868372.1\|34238_34598_+	hypothetical protein	NA	NA	NA	NA
35067:35084	attL	NA	NA	NA	NA
WP_158234207.1\|35133_35655_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1B1P773	Bacillus_phage	1.1e-16	32.8
WP_068226324.1\|35808_37008_-	amidohydrolase family protein	NA	NA	NA	NA
WP_082920260.1\|37095_37455_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068226325.1\|37481_37796_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.0e-05	34.7
37613:37630	attR	NA	NA	NA	NA
WP_068226327.1\|37830_38364_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_082920261.1\|38536_38761_-	hypothetical protein	NA	NA	NA	NA
WP_068226330.1\|39117_40047_-\|transposase	IS30 family transposase	H7BW47	unidentified_phage	1.5e-24	34.1
WP_056986391.1\|40147_40564_-	cupin domain-containing protein	NA	NA	NA	NA
WP_017260570.1\|40563_40902_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_046871958.1\|41363_41807_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_046871959.1\|41897_42221_-	multidrug efflux SMR transporter	E5E3Y9	Acinetobacter_phage	5.4e-06	31.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP014623

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014623_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014623_1

778982-779079

Unclear

Consensus_repeat	Method
CCGGTTAAATACCGTGTTCTTACCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014623_1

>merge|NZ_CP014623|1|778982-779079|CRISPRCasFinder
CCGGTTAAATACCGTGTTCTTACCACCCAGAAAGCTGCTTAAAGTTTCGTCCAATATTTGGGGTTCACTTCACCGGGTAAATACCGTGTTCTTACCAC

>NZ_CP014623|1|1|778982-779079|CRISPRCasFinder
CCGGTTAAATACCGTGTTCTTACCAC	CCAGAAAGCTGCTTAAAGTTTCGTCCAATATTTGGGGTTCACTTCA
CCGGGTAAATACCGTGTTCTTACCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014623.1\|WP_068223924.1\|780925_781282_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133384
NZ_CP014623.1\|WP_068223936.1\|783362_783920_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP014623.1\|WP_068226206.1\|783000_783342_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_CP014623.1\|WP_068223911.1\|773000_774017_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP014623.1\|WP_100077709.1\|786348_787329_-\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|372824
NZ_CP014623.1\|WP_068223916.1\|776952_777294_+\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP014623.1\|WP_068223914.1\|776422_776749_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014623.1\|WP_068223918.1\|777315_778749_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP014623.1\|WP_068223921.1\|779522_780887_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP014623.1\|WP_068223939.1\|784370_784976_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187577
NZ_CP014623.1\|WP_068223930.1\|782343_782553_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014623.1\|WP_178378324.1\|774134_775688_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP014623.1\|WP_068222408.1\|775696_776071_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP014623.1\|WP_068222411.1\|776060_776243_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014623.1\|WP_068223905.1\|768626_772181_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|274008
NZ_CP014623.1\|WP_068223908.1\|772177_772984_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_CP014623.1\|WP_143452790.1\|782556_782778_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014623.1\|WP_068223927.1\|781802_782237_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP014623.1\|WP_068223903.1\|767913_768612_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP014623.1\|WP_068226207.1\|785129_786176_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176247

Protein	Function_ID	Function_description	E-value
NZ_CP014623.1\|WP_068223924.1\|780925_781282_+\|hypothetical-protein	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.58531e-09
NZ_CP014623.1\|WP_068223936.1\|783362_783920_+\|acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	3.55456e-51
NZ_CP014623.1\|WP_068223911.1\|773000_774017_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	1.04857e-178
NZ_CP014623.1\|WP_100077709.1\|786348_787329_-\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|372824	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease.	2.90186e-49
NZ_CP014623.1\|WP_068223916.1\|776952_777294_+\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	2.59882e-42
NZ_CP014623.1\|WP_068223918.1\|777315_778749_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP014623.1\|WP_068223921.1\|779522_780887_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	9.9183e-54
NZ_CP014623.1\|WP_068223939.1\|784370_784976_+\|NAD(P)H-binding-protein	gnl\|CDD\|187577	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6. These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.547e-58
NZ_CP014623.1\|WP_068226206.1\|783000_783342_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	3.79457e-15
NZ_CP014623.1\|WP_178378324.1\|774134_775688_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.68877e-96
NZ_CP014623.1\|WP_068222408.1\|775696_776071_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	3.28862e-41
NZ_CP014623.1\|WP_068223905.1\|768626_772181_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
NZ_CP014623.1\|WP_068223908.1\|772177_772984_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.83371e-84
NZ_CP014623.1\|WP_068223927.1\|781802_782237_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	6.49372e-31
NZ_CP014623.1\|WP_068223903.1\|767913_768612_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	8.70098e-106
NZ_CP014623.1\|WP_068226207.1\|785129_786176_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176247	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	3.25829e-160

>NZ_CP014623.1|WP_068223918.1|777315_778749_+|signal-recognition-particle-protein
MAFEGLTERLQNAMSKLRRKGKISESDVKDAMREIRLALLEADVNFGVVKDFVKTVRERAVGTEVLDSLSPAQQIVKIVDEELTKVMGDEAVPLNKSAHIPTIIMMVGLQGAGKTTTAAKLAGYLKKNDNARPLFIAADIYRPAAIDQLQTVARQVDAPVFEMGTDTDPREIVRQGLAKAAEDKNDYVIIDTAGRLQIDEKLMQELQDIKEIAKPDEILLTVDAMTGQNAANVAKSFDEQLTITGVVLTKLDGDTRGGAALSIRAVTGKPIKFTGQGEKLTDLDVFHPDRMANRILGMGDMLTLIEKAQTDYDEKKATALAEKMQENTFDFNDFIDQLDQVQNMGGVQDIMKMIPGMSKMPGIENVQMGPKEMGHMKAVVYSMTPAERTNPDILNPSRRRRIAAGSGRSIQEVNRMIKQFNESKKMMSKMSNGNFSGMDQMFGKGMSGRLGKMAMNSMVRKQKKNKRKQIKALRRRK
>NZ_CP014623.1|WP_068223916.1|776952_777294_+|putative-DNA-binding-protein
MEIAKNDRVNSLFDFYASLLTKKQYNYLQLYYADDYSLGEIAEEFSVSRQAVYDNIKRTEKILEDYEAKLHLLADFKVRNATLDRLVAYVNANYQKDAKLERLVHDLAKDEED
>NZ_CP014623.1|WP_068223914.1|776422_776749_-|hypothetical-protein
MVPVIIYWGSVILLAVWLVWNVLFSIKFLASGERGNLWGFMLLNIFALIFGILVQWAFADNGFIKWALASSSQKVVQTPWLYINNWINVALIVLQFFLGWIRSPKTAK
>NZ_CP014623.1|WP_068222411.1|776060_776243_-|hypothetical-protein
MDKPDIVQIKMDHSGSQSRSTMATKALQIRVDANKSVVVYNRINNYILEAVLKAVFAGDN
>NZ_CP014623.1|WP_068222408.1|775696_776071_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MIIDQRQIQQVFLVCGKTDLRRGIDGLAGVIQDQFDLDPYNRALYLFCGTRKDRFKALFWDGDGFLLLYKRIENGRLQWPTDQNALRKLNSKQLTRLLSGWSLDATIHQTCPPGHERRKNNYPN
>NZ_CP014623.1|WP_178378324.1|774134_775688_-|IS66-family-transposase
MVNSIQQIRIEWIKLMTPEEEIIALRKQVAELTEMVAYLTKKIYGQKSEQIDPNQLSLLEGNDGVFITPEQPGQQSDADQVPAKKKRKKTRQETLSRDLPVRETVIDLPTQQCAYGHELTPVGKKFVREEVHFIPAKLYREHIYTQTYKCSECELEAGSAHLVQAQTPVALIPHSLASASLVAEIIHKKFLLATPLYRQLADWQRLGIALSEATISNWIIKTSQLVEPIYNLLQQRLSNQRYLQGDETPMQVLREPGKTAAAKSYMWVARTVKQSPQQIIFYAYGSTRSGTFAQKLYRNFTGILQCDGYTGYNLLENSVTRIGCWAHVRRKFYDATQANGKPISSVPLALIDEMFALERQWQHFSPRVRRRRRRSKVRKLLKRFWQWIDSADVLPKSRLGKAVTYAIDQRSTLERLVNVGIMDWSNNAAERNMKSLVIGRKNWLFSTSQAGARSTAIWLTLVESAKANGLDPRGYITYLLKTMPQHPSFTDLAQLEGYLPWNYSGARHQDRNKASNE
>NZ_CP014623.1|WP_068223911.1|773000_774017_+|signal-recognition-particle-docking-protein-FtsY
MGLFDRIKHAFSGNKPEEETKTEAKYDKGLEKSRKTFGERMNALFANFRSVDEAFFDDLEETLIGADVGFDMAVRISDELREEVKLRNAKSQQEVAQTIVEKLVDIYDEEGKDEKNTINFAPTGPTVILFVGVNGAGKTTTIGKLAHQYQEDGKKVVLAAGDTFRAAATEQLEVWGQRAGVPVVSGKAQSDPAAVVFDAVKKAKNEDFDVLLVDTAGRLQNKVNLMKELEKIKRVISREIPDAPQEVLLVLDATTGQNALIQAKQFKETTDVTGLVLTKLDGTAKGGIVLAIRNELHLPVKLVGLGEQIDDLQAFDPNEFVYGLFKGLITDEPAKENE
>NZ_CP014623.1|WP_068223908.1|772177_772984_+|Cof-type-HAD-IIB-family-hydrolase
MIKMIALDLDGTLLNSQKQISPRTITTLHRLQQQGLKIVLCTGRAINAISDYLQQLNLMQAGEFVSTFNGALVRATMQKTPLLQINLAKSTMQPLFTFAQQVKWPVDVLDFEQVYHITDFGASLYQAMNPNLKVVATTATQLPEQHDYSKLVIATEPEQINQAVPRLPEELKAEFNVASSRTNLLEFVPKTVTKANALDVLLAHLGWDRSNLMAFGDQANDLSMIAAANVGVAMANAIPAVKAVAGQTTLTNDQDGVAVFLDDYFQLN
>NZ_CP014623.1|WP_068223905.1|768626_772181_+|chromosome-segregation-protein-SMC
MQLKTLEINGFKSFADKTVINFNSGITGIVGPNGSGKSNITEAIRWALGEQSAKSLRGGKMPDVIFAGSSARKPLNRAEVTLTFSNHDHALKTSFEEVSVMRSLYRDGTSAFYINQKPCRLKDIVNLFMDSGLGRESFSIISQGKIAAVFNSKPEDRRGIIEEAAGVVKYKQRKHEATGQLDETAVNLNRVADIIVELKDQVEPLKEQSSLAKDYLAQKKQLNEVTKTLLVRQIDEQVVAKKQQQTELKETRENLEQAKQNQAAFAQQVTTQKQQQQQLELELDQLQQQRLTLTKQQADVSGQQQLAGERRKVVQEKVANLTTTITTKQQQLSEQTDLVARNTQLLTEKQQQVAQQEKQLDLQQDGSLSASKRKQQIENLRNQYIDQMQQQTTLHNEAAYLQKQLTQENAVNKKQQNQSSAAQQRAAKVVAELDAAQKAFEQANEREQTLTKQLTDLTQLHQRHNQQYDQAQKNWYQALAIMQKAEAKQSSFAEMKQDYAGFYAGVRGVLKNRRQLNGIVGAVAELVEVPEKYNTAIETALGGQLQSVVVENQTAGKAAIQFLKQKQLGRATFLPLDVVHAAGLTQAQLTEVQQVTGFVGIAADLVTYDQRIAPVIRHLLGRIVIAKDITAAIQIANQLQHRIRVVSLSGDVMNPGGSMTGGGATKRGGLLARELEQRQLAEKLHAMQLQLDDKETALKTAKATLKKEEAQQVTLRQQQQTLTKQNTTAATTIATLKTQQAQFTQQQQASLYEKQQQAVTKKQVEQQLATNTTKTTALVTAMATLDKQLQQAQTDLTAYEANQNQTAKQRQAAQTSLAVAKEQLQHLKKEQREGQARKEDFASDLRTAQQEKEQLTKQLAQTSTTTDSVKAKLAKIEQQLGQQTTAITAKQQKRATIATALEQQQLQLDHAQAVVQQQDAKLTQVTANVADLNQQINHALTTLSETYELSYAAAEAAALSTATAELRQQAKLLQMGLDDIGTVNLGAISEYERLKKRYDFLNEQRQDLLTAKEQLTTTMTEMDQEVIQRFKTTFDQVAAAFSETFPKMFGGGQASLALTDPHELLTTGIEIIAQPPGKKLQQLSLLSGGERALTAITLLFAIIKVRPVPLCILDEVEAALDDANVDRFGRFLQHYDKNTQFVVITHRKGTMMAMDVLYGVAMQESGVSHMVSVSLKEATEVVQQ
>NZ_CP014623.1|WP_068223903.1|767913_768612_+|ribonuclease-III
MNEKFLKELKAKFGIEYHNLALLEEAFTQSSYVNEHPELQLQDYQRIEFLGDAVMELTVSDYLYKKYPNYPEGKLTRLRAAIVCEDSFSAFARECHFDQYILLGRGEEKNGARNRNSLLCDIFESFVGSLYLDQGKAAVTKFVQQVVFPKVEAGAFSYVMDHKTNLQEYLQKDGEVEISYHLVAEAMPTNNQQFTVEVVAKSKVLGTGSGHTKKAAEQVAAEVALDRLLGHA
>NZ_CP014623.1|WP_068223921.1|779522_780887_+|MFS-transporter
MQNKFTKYEFAILAIVLVSYFMTVLDVSVVITALPNIQSDLHLSTANLTWVQNAYTIIFGGLLLLGGRLGDIIGRKQIFNLGLVIFGIGSLLVGLANSATWLIIARGFQGAGAAALAPSTLALLMDSIPAGPKRIRAVANYGAVAGIGASLGLVIGGLFASLLSWRYAFFVNVPIAIVMFIWASKTVHATKAQKGSFDGIGSLLSLVGMVSLVYGILLISDSNTAWYWIIAAVILLALFVLREAKVAQPIMPLRVFKNKERTGAYLARMLFLGAMMAFWFFITQFLQKVYGFSPLLAGIGFFPMTIANFISALQVSRWTAKFGNGMTLVGGLILTIIGMFWLSFAGANGNYILTIALPMILIGLGQGAALSPLTTAGIADIEPRDTGAASGVVNVAHQVGGSLGLAILVVLGTALAGTNNLVLRTDWALRGGVGFLIVALLLTIILIVPKKQNN
>NZ_CP014623.1|WP_068223924.1|780925_781282_+|hypothetical-protein
MTSQTLSRQTGISKSKLKFYQKSALLPDSKLFTQRQIIDFVKFINEMYAVGVNLDKLRRYAELQNEKQRLIAAQTTLLKQTLVQLDEKRNDLKLELAHVNYLQENQSLAECELRQLES
>NZ_CP014623.1|WP_068223927.1|781802_782237_-|MerR-family-transcriptional-regulator
MNIKEASNQTGVYSAAIRYYEKELLIPAIDRSETGNREIDARIIRRINFVKQMRAAGMTIENLRRYIELFDSKEDNDKEQIALLAEQLSDMEERRDDIQSAIDHLHYKLDHYYDHVVASEKELQELERKHDEQIAKTNDAEAKF
>NZ_CP014623.1|WP_068223930.1|782343_782553_+|hypothetical-protein
MINLISIKEVLWTLSLGAMLSGLLFGRLFTWPQDRILVVVFTSLASAMVLIAVANVIWLTIIGVHLFFP
>NZ_CP014623.1|WP_143452790.1|782556_782778_+|hypothetical-protein
MNAVNLEGNGNTLATSLILIADNLADSLSPYIALLLQNGLHIASIRNLFWLNTLVFVLWAIVFAFISWRKKIV
>NZ_CP014623.1|WP_068226206.1|783000_783342_+|nuclear-transport-factor-2-family-protein
MYRKHNRYMVAGDIDKLGALLADDFHLVHMTGMVQSKQKWLSEIQSGQMHYFSSTEDHIAVTELTAEHAVLVGQSQVDASIHGSRNTWPLQLELHLNKVNGQWLIMHIDASMY
>NZ_CP014623.1|WP_068223936.1|783362_783920_+|acetyltransferase
MSVFADLQNGQTYDIRDADYQSEVHGEIDRCDHICFEINNTDPVNKTRLVGLENELLANQMQNGTYFTPPMHIDCANSVHLGKNVYANHSLTMMSLGGITIDNGVMLGPGVGLFTVNHEPKNIRVVKTGAIHIKKNAWLGARVSVLPGVTIGENAIIGTGAVVTKDIPANSIAVGTPAKVIKKID
>NZ_CP014623.1|WP_068223939.1|784370_784976_+|NAD(P)H-binding-protein
MTNVLIIGATGTVGGTTRQYLLANTTDQLTLMARNTRRLGNLNADRERAIAGSVTDKTALQDALKGQDVVFAALSGNLRAMAQSLIAAMDEAGVTRLLFITSMGIYNEIPAAVGASGNLASNPVLQTYRDAADVIEASDLNYTIIRPGWFDNGNDTAYQVTHKGEPFGGHDVSVVSIADLVMRLAHDPKLGARDSLGINRK
>NZ_CP014623.1|WP_068226207.1|785129_786176_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MKSAIFEKAGLVTVQDVDKPSLQAVDDVIIKVVRACVCGSDLWAYAHGDNKEPHSVNDGHEALGIVEEVGSAITTVKPGDFVIAPFTHGCGECDACLAGFDGTCDRHQGGTNWSNGFQSEYIRFQYANWALIKVPGQPSDYTEGMINSLTTLADVMPTGYHAARCANVQRGDKVVVIGDGAVGQCAVIAAKMRGASQIVLMSRHEDRQQMALQSGATAVVAERGAEGIAKVRALLGGGADAALECVGTESAIDQALGVLHNGGRIGYVGVPHYNNHAMGSTFAQNISVAGGSASVTTYDKQFLLKAVLDGNINPGRVFTKTYRLNDINQAYQDMQNRKTIKSMVVVFD
>NZ_CP014623.1|WP_100077709.1|786348_787329_-|DNA/RNA-non-specific-endonuclease
MMIRKPHRQWPLLAVVATLLSLTFNATASTSTQAAPASNSSTEQISGKKTNKQLANFDYAGTQTIDINNGHPTFSKKTLKTSKGAWQKYGQLDKLNRPTAANAMLQKNLMPTAKREPLTVNPTGWRNKKIKSGYLYNRSHLIGYQLTGQNNNPKNLITGTRSLNSPEMLRFEDDIAYYLKSNPSGYIRYRVTPIFKSNELLARGVHMQAQSIGSNAVSFNVYIFNIEDGVTLNYNDGTSQISASEVATSSSSSSSTAAVQTPQAPQTTESASGDVTTGNQGEIIGNRNSHIYHVPGQSGYHMNSANAIYFNTEAEAQAAGYRKSLR

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Crispr_ID: NZ_CP014623_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014623_2

844462-846673

TypeII

Consensus_repeat	Method
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CRISPRCasFinder
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CRT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	PILER-CR

33 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP014623_2

>merge|NZ_CP014623|2|844462-846673|CRISPRCasFinder,CRT,PILER-CR
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCCAAAAAAGTATCAACTAGTATTCAATCTCGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCGCAAGATGAGATGCAGCAATTTGTGATTAGGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTGCTTATGCTTGTGTAGAATATTAATGTGCGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCCAAGCACCCTTTTTTTATCCCAACCATACGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTTGTAAAAAATGGGGTCGCAATTCCTTCAAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCACGCCTAGAACAGTACCCATTGCAGTACCAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCGTCTGACGTGCCGCGGTTTGGCTTTTCTGGGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCAGAGAAATTGATATAGCTCTTAGCTTCTTGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCGACAAAGAACCTCCTAGCGCCACAATAGCCGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCATAGCTCATGGGACGATGATGATTTGGTGGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCATGCCATCTGTGTAGACACCGTTGACCATAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTACGAAGCACCGCATAAAGCGGATGTGCTCGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCACCGGTTTGGCTTCACTCTTTAAAGACAAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCGATCGGACGCACTTTGTCTATTATGGATTTGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCGAGAGCGGCCACCGTTTGCGTGACATTATCGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTGTATTTTGCGGTGTGGTCATTTTTCATGAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCATTATACGTTGAAAAATACAATAAGCAGATGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTCATCTCCTTCTACCCGATTGACCCCCATTGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCAATAGCAGAAAAGTATGAGCGATGTGGGAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTTAATTACGCGGTTAAGCAAAAGATCTTAGGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTGTTCAATCAGCATGGTAACGTCATCAATTGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCCAGACGAAACGTATTTAACCCCGTTGCCGGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCACAACCTAGTCGTGACAAAGTAGTAGAAGCGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCTGAAAATACCTCACTAGACCTAATTTTTAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTACTGAACTAGTTAATCAATATAATAAAAAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCTTTCAATGTAAGTCAATACCGATTTAGTGGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCACAATCATTACCATTACGATGCTCGCTGGGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCACTCCTGGTTCAAACATTGAATACTATGTGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTCCACTCAGCCAGCTCATAATGATATGAGTGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCGCCAACACGTAAGGCAATTAGTGGCGTTTGGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCAAAGGTAATCACAGGTATCGTTCGCTTATGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCCAAAAGCAATGATGAACCTTATATTTATAGATCTATTTTAGCTGAAAACTGAAGGAATCAATAGCTGACCGTGTGTGTTATTTCTTCGTCAATTTGATCTATTTTAGCCGAAAACTGAAGGAATCAATAGC

>NZ_CP014623|2|2|844462-846673|CRISPRCasFinder
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CCAAAAAAGTATCAACTAGTATTCAATCTC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GCAAGATGAGATGCAGCAATTTGTGATTAG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGCTTATGCTTGTGTAGAATATTAATGTGC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CCAAGCACCCTTTTTTTATCCCAACCATAC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TTGTAAAAAATGGGGTCGCAATTCCTTCAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACGCCTAGAACAGTACCCATTGCAGTACCA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GTCTGACGTGCCGCGGTTTGGCTTTTCTGG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAGAGAAATTGATATAGCTCTTAGCTTCTT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GACAAAGAACCTCCTAGCGCCACAATAGCC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CATAGCTCATGGGACGATGATGATTTGGTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ATGCCATCTGTGTAGACACCGTTGACCATA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TACGAAGCACCGCATAAAGCGGATGTGCTC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CACCGGTTTGGCTTCACTCTTTAAAGACAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GATCGGACGCACTTTGTCTATTATGGATTT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GAGAGCGGCCACCGTTTGCGTGACATTATC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGTATTTTGCGGTGTGGTCATTTTTCATGA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ATTATACGTTGAAAAATACAATAAGCAGAT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TCATCTCCTTCTACCCGATTGACCCCCATT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAATAGCAGAAAAGTATGAGCGATGTGGGA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TTAATTACGCGGTTAAGCAAAAGATCTTAG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGTTCAATCAGCATGGTAACGTCATCAATT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CCAGACGAAACGTATTTAACCCCGTTGCCG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACAACCTAGTCGTGACAAAGTAGTAGAAGC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CTGAAAATACCTCACTAGACCTAATTTTTA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TACTGAACTAGTTAATCAATATAATAAAAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CTTTCAATGTAAGTCAATACCGATTTAGTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CACAATCATTACCATTACGATGCTCGCTGG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACTCCTGGTTCAAACATTGAATACTATGT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TCCACTCAGCCAGCTCATAATGATATGAGT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GCCAACACGTAAGGCAATTAGTGGCGTTTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAAAGGTAATCACAGGTATCGTTCGCTTAT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAAAAGCAATGATGAACCTTATATTTATA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGACCGTGTGTGTTATTTCTTCGTCAATTT
GATCTATTTTAGCCGAAAACTGAAGGAATCAATAGC

>NZ_CP014623|2|1|844462-846673|CRT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CCAAAAAAGTATCAACTAGTATTCAATCTC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GCAAGATGAGATGCAGCAATTTGTGATTAG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGCTTATGCTTGTGTAGAATATTAATGTGC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CCAAGCACCCTTTTTTTATCCCAACCATAC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TTGTAAAAAATGGGGTCGCAATTCCTTCAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACGCCTAGAACAGTACCCATTGCAGTACCA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GTCTGACGTGCCGCGGTTTGGCTTTTCTGG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAGAGAAATTGATATAGCTCTTAGCTTCTT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GACAAAGAACCTCCTAGCGCCACAATAGCC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CATAGCTCATGGGACGATGATGATTTGGTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ATGCCATCTGTGTAGACACCGTTGACCATA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TACGAAGCACCGCATAAAGCGGATGTGCTC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CACCGGTTTGGCTTCACTCTTTAAAGACAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GATCGGACGCACTTTGTCTATTATGGATTT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GAGAGCGGCCACCGTTTGCGTGACATTATC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGTATTTTGCGGTGTGGTCATTTTTCATGA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ATTATACGTTGAAAAATACAATAAGCAGAT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TCATCTCCTTCTACCCGATTGACCCCCATT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAATAGCAGAAAAGTATGAGCGATGTGGGA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TTAATTACGCGGTTAAGCAAAAGATCTTAG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGTTCAATCAGCATGGTAACGTCATCAATT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CCAGACGAAACGTATTTAACCCCGTTGCCG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACAACCTAGTCGTGACAAAGTAGTAGAAGC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CTGAAAATACCTCACTAGACCTAATTTTTA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TACTGAACTAGTTAATCAATATAATAAAAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CTTTCAATGTAAGTCAATACCGATTTAGTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CACAATCATTACCATTACGATGCTCGCTGG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACTCCTGGTTCAAACATTGAATACTATGT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TCCACTCAGCCAGCTCATAATGATATGAGT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GCCAACACGTAAGGCAATTAGTGGCGTTTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAAAGGTAATCACAGGTATCGTTCGCTTAT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAAAAGCAATGATGAACCTTATATTTATA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGACCGTGTGTGTTATTTCTTCGTCAATTT
GATCTATTTTAGCCGAAAACTGAAGGAATCAATAGC

>NZ_CP014623|2|1|844726-846673|PILER-CR
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TTGTAAAAAATGGGGTCGCAATTCCTTCAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACGCCTAGAACAGTACCCATTGCAGTACCA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GTCTGACGTGCCGCGGTTTGGCTTTTCTGG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAGAGAAATTGATATAGCTCTTAGCTTCTT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GACAAAGAACCTCCTAGCGCCACAATAGCC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CATAGCTCATGGGACGATGATGATTTGGTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ATGCCATCTGTGTAGACACCGTTGACCATA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TACGAAGCACCGCATAAAGCGGATGTGCTC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CACCGGTTTGGCTTCACTCTTTAAAGACAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GATCGGACGCACTTTGTCTATTATGGATTT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GAGAGCGGCCACCGTTTGCGTGACATTATC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGTATTTTGCGGTGTGGTCATTTTTCATGA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ATTATACGTTGAAAAATACAATAAGCAGAT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TCATCTCCTTCTACCCGATTGACCCCCATT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAATAGCAGAAAAGTATGAGCGATGTGGGA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TTAATTACGCGGTTAAGCAAAAGATCTTAG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGTTCAATCAGCATGGTAACGTCATCAATT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CCAGACGAAACGTATTTAACCCCGTTGCCG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACAACCTAGTCGTGACAAAGTAGTAGAAGC
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CTGAAAATACCTCACTAGACCTAATTTTTA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TACTGAACTAGTTAATCAATATAATAAAAA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CTTTCAATGTAAGTCAATACCGATTTAGTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CACAATCATTACCATTACGATGCTCGCTGG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	ACTCCTGGTTCAAACATTGAATACTATGT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TCCACTCAGCCAGCTCATAATGATATGAGT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	GCCAACACGTAAGGCAATTAGTGGCGTTTG
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAAAGGTAATCACAGGTATCGTTCGCTTAT
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	CAAAAGCAATGATGAACCTTATATTTATA
GATCTATTTTAGCTGAAAACTGAAGGAATCAATAGC	TGACCGTGTGTGTTATTTCTTCGTCAATTT
GATCTATTTTAGCCGAAAACTGAAGGAATCAATAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014623.1\|WP_068224094.1\|848040_848610_-\|DUF5067-domain-containing-protein	unknown	unknown	gnl\|CDD\|374759
NZ_CP014623.1\|WP_156521539.1\|855656_858890_+\|BREX-1-system-adenine-specific-DNA-methyltransferase-PglX	unknown	unknown	gnl\|CDD\|380294
NZ_CP014623.1\|WP_068224079.1\|837182_837515_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014623.1\|WP_068224071.1\|834745_835753_-\|DnaB-like-helicase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377132
NZ_CP014623.1\|WP_068224081.1\|837504_838365_-\|conserved-phage-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|378197
NZ_CP014623.1\|WP_082918498.1\|844085_844409_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP014623.1\|WP_068224088.1\|843190_844093_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP014623.1\|WP_068224090.1\|846858_847119_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014623.1\|WP_068224092.1\|847517_847853_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014623.1\|WP_068224068.1\|833799_834564_-\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|377151
NZ_CP014623.1\|WP_068224101.1\|859040_861563_+\|BREX-1-system-phosphatase-PglZ-type-A	unknown	unknown	gnl\|CDD\|274259
NZ_CP014623.1\|WP_068224083.1\|838829_839582_+\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380322
NZ_CP014623.1\|WP_068224086.1\|839819_843188_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP014623.1\|WP_068224095.1\|850260_850845_+\|DUF1819-family-protein	unknown	unknown	gnl\|CDD\|378066
NZ_CP014623.1\|WP_068224097.1\|850847_851426_+\|DUF1788-domain-containing-protein	unknown	unknown	gnl\|CDD\|378040
NZ_CP014623.1\|WP_068224099.1\|851505_855159_+\|BREX-system-P-loop-protein-BrxC	unknown	unknown	gnl\|CDD\|380283
NZ_CP014623.1\|WP_068224105.1\|862546_863032_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|225998
NZ_CP014623.1\|WP_082920225.1\|855312_855726_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380294
NZ_CP014623.1\|WP_068224066.1\|832980_833346_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|182138
NZ_CP014623.1\|WP_068224077.1\|835787_837071_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574

Protein	Function_ID	Function_description	E-value
NZ_CP014623.1\|WP_068224094.1\|848040_848610_-\|DUF5067-domain-containing-protein	gnl\|CDD\|374759	pfam16729, DUF5067, Domain of unknown function (DUF5067).	2.02224e-18
NZ_CP014623.1\|WP_156521539.1\|855656_858890_+\|BREX-1-system-adenine-specific-DNA-methyltransferase-PglX	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	0
NZ_CP014623.1\|WP_068224071.1\|834745_835753_-\|DnaB-like-helicase-C-terminal-domain-containing-protein	gnl\|CDD\|377132	pfam03796, DnaB_C, DnaB-like helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.	1.34821e-58
NZ_CP014623.1\|WP_068224081.1\|837504_838365_-\|conserved-phage-C-terminal-domain-containing-protein	gnl\|CDD\|378197	pfam09524, Phg_2220_C, Conserved phage C-terminus (Phg_2220_C). This entry represents the conserved C-terminal domain of a family of proteins found exclusively in bacteriophage and in bacterial prophage regions. The functions of this domain and the proteins containing it are unknown.	2.9662e-13
NZ_CP014623.1\|WP_082918498.1\|844085_844409_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	8.53992e-37
NZ_CP014623.1\|WP_068224088.1\|843190_844093_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	3.82282e-104
NZ_CP014623.1\|WP_068224095.1\|850260_850845_+\|DUF1819-family-protein	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	2.95191e-42
NZ_CP014623.1\|WP_068224097.1\|850847_851426_+\|DUF1788-domain-containing-protein	gnl\|CDD\|378040	pfam08747, DUF1788, Domain of unknown function (DUF1788). Putative uncharacterized domain in proteins of length around 200 amino acids.	2.67041e-46
NZ_CP014623.1\|WP_068224068.1\|833799_834564_-\|peroxide-stress-protein-YaaA	gnl\|CDD\|377151	pfam03883, H2O2_YaaD, Peroxide stress protein YaaA. YaaA is a key element of the stress response to H2O2. It acts by reducing the level of intracellular iron levels after peroxide stress, thereby attenuating the Fenton reaction and the DNA damage that this would cause. The molecular mechanism of action is not known.	3.86745e-105
NZ_CP014623.1\|WP_068224101.1\|859040_861563_+\|BREX-1-system-phosphatase-PglZ-type-A	gnl\|CDD\|274259	TIGR02687, conserved_hypothetical_protein, TIGR02687 family protein. Members of this family are uncharacterized proteins sporadically distributed in bacteria and archaea, about 880 amino acids in length. This protein is repeatedly found upstream of another uncharacterized protein of about 470 amino acids in length, modeled by TIGR02688.	6.38977e-151
NZ_CP014623.1\|WP_068224083.1\|838829_839582_+\|NADPH-dependent-oxidoreductase	gnl\|CDD\|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	1.64652e-92
NZ_CP014623.1\|WP_068224086.1\|839819_843188_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	1.93205e-142
NZ_CP014623.1\|WP_068224099.1\|851505_855159_+\|BREX-system-P-loop-protein-BrxC	gnl\|CDD\|380283	NF033441, BREX_BrxC, BREX system P-loop protein BrxC. BrxC is a P-loop-containing protein, and probable ATPase, from BREX (bacteriophage exclusion) systems of type 1.	0
NZ_CP014623.1\|WP_068224105.1\|862546_863032_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|225998	COG3467, COG3467, Predicted flavin-nucleotide-binding protein [General function prediction only].	2.43224e-21
NZ_CP014623.1\|WP_082920225.1\|855312_855726_+\|hypothetical-protein	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	5.92652e-09
NZ_CP014623.1\|WP_068224066.1\|832980_833346_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	5.20936e-12
NZ_CP014623.1\|WP_068224077.1\|835787_837071_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	1.01168e-50

>NZ_CP014623.1|WP_082918498.1|844085_844409_+|CRISPR-associated-endonuclease-Cas2
MSSKYMRLLVMFDLPVVKAKDRRAAAKFRQYLLGEGYVMMQYSVYYRIVNGYDMSKKYELRLDDNLPEKGSVRLLVITEKQFDEMRLLVGDPLPNEEKVESGQMTTF
>NZ_CP014623.1|WP_068224088.1|843190_844093_+|type-II-CRISPR-associated-endonuclease-Cas1
MAFRNLYIQNPAKLSISKSQLVIQQKERYTVPVEDISSIMIEHKQCTITAPALSFLAEHQVAVFTCDEKHLPCAMVLPLGQYYRKLEALEAQLHVRTKTKARLWQKLMKQKIENQAKVLELNQCNNVAELYFLATQVVEGDKTFKESRAARLYFVGLFGDHFNRRNENTLNGALNYGYAIIRGIIARDICVYGFEPALGVFHKNELNPFNLADDLIEPFRAYVDLWVYEHQTDLKDGLTPANKQALFQLLFTEVRIDDEFHSLSNAVHKLVSSYTTCCRNNSAAGLKLPELIPLVAHEYE
>NZ_CP014623.1|WP_068224086.1|839819_843188_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MGYRIGLDVGIASTGYSVLKTDKEGNPYKILTLNSVIYPRAEDPQTGASLAEPRRLKRGLRRRTRRTKFRKQRTQQLFIHSGLLSKAEIEQILTKPQTDYSVYELRVAGLDRRLTNSELFRVLYFFVGHRGFKSNRKSELNPDNDADKKQMGQLLNSIEEIKKDISEKGYRTVGELYMKDPKYTAHKRNKGYNDGYLSTPNRQMLVDEIKQILDKQRELGNEKLTDEFYASYLLGNEDHAGIFLAQRDFDEGPGAGPYAGDQIKKMVGKDIFEPNEDRAAKATYTFQYFNLLQKMTSLNYQNTTGDTWHSLNGLERQAIIDAVFAKAEKPTKTYRPTDFGELRKLLKLTDDARFNLVNYGSFRTQKEIETVEKKTRFVDFKAYHDLVNVLPEEMWSSRQLLDHIGTALTLYSSDKRRRRYFAEELNLPKDLIEKLLPLNFAKFGHLSIKSMQNIIPYLEMGQVYSEATTNAGYDFRKKKISKDTIQEEITNPVVRRAVTKTIKVVEQIMRRYGNHPDGINIELARELGRNFDDRRKIQKNQDQNRQNNDKIVAELTELGIPVNGQNIIRYKLHKEQNGIDPYTGDQIPFGSAFSVNYEVDHIIPYSISWDDSYTNKVLTSAKCNREKGNRIPMTYLANDEKRTDALTNMADNVIRNSRKRQKLLKQKLSDEEKKDWKQRNINDTRFITRVLYNYFRQAIDFNPELEKKQHVLPLNGEVTSKIRSRWGFLKVREDGDLHHAVDATVIAAITPAFIQQVTKYSQHQEVKNNRALWHDAEIKDAEYAAEAQRMDADLFNKIFNGFPLPWPEFRDELLDRISDNPAEMMKNRSWNTYTPVEIAKLKPVFVVRLANHKISGPAHLDTIRSAKLFDEKGIVLSRISIAKLKLNKKGQVATGDGVYDPENSNNGDKVVYSAIRKALEAHGGSGEVAFPEGYLEYLDHGTKKLVRKVRVAKKASLPVLLKNKAAADNGSMVRIDVFNTGKKFVFVPIYIKDTVERVLPSKAVLQGKSAKNWYQITDADKFCFSLYPGDMVHIKSRTGIKPKYANTTVEHSIKLVKDFYGYFNGANIANGNISIRAHDSSYKSESVGISGLLEFEKYQVDYFGRYHKVHEKKRQLFVKRDE
>NZ_CP014623.1|WP_068224083.1|838829_839582_+|NADPH-dependent-oxidoreductase
MLKEATIAQQLDHRTIRAFKQQPVTAELISELVAVAQHTATSNFQQAFSVISVTDPDKKKQIAAVSNQKYVADNGHLFIFVADQHRNQQIGAEMGKTANHLGDTDHFLAAWSDASLAVQNTVVAAESLGLGAVILGSILNDAQKIIDILQLPQLTFPVLGLAIGWPDQKPQLKPRLPERFVHFENTYQLPTPVKPDLVDYDAKVHEYYDLRDANRRVDTFTNQVQKRLMLRPAKRAELLPVLRRQGFLLE
>NZ_CP014623.1|WP_068224081.1|837504_838365_-|conserved-phage-C-terminal-domain-containing-protein
MSSYFTVPINLYQQPEFRLLAQNQVNTYHASFRLWHFLLAEAANNNDHGRISAAASLAYTVKEIKQISGITNNRSVDQLCGLLIKVGLLYENEKRALYIANWNQFCPEIQPVHETEPIKTETVKPAQVTSATKNQKALNLKHPATSAEQKQAQQIITELAQISGKHFPEAERHEECVVAWLQRGYLPEQFKQVSLAKSAEWGNQIEMRKFVRPQTLFGPKFINYVNDIVPERPVTVVHHVEPMPRAERLQGLYLDCDRDLDETFRRAKIEGMLITKEELEVEIDGI
>NZ_CP014623.1|WP_068224079.1|837182_837515_-|hypothetical-protein
MEFEQNAVAYLVDHPDICKSTEIEARWFHVIKFQHLVKVILENDGDFKDWVDVKRRFFLDYPLDFAEDEWLKLHDTGVTTKTFKSVLQGLKAWYYGSILFPVDSLQMVNY
>NZ_CP014623.1|WP_068224077.1|835787_837071_-|ISL3-family-transposase
MNPIDNHIKFALSIKDPNVIFFDYGYEYKQNRRIKVYRATVKTSLKRCPQCGFDQFNHNGHYRARVTYLAANASEPVYLELHKERLLCKNCGTSVMATTELVDKYCNISRATRQKIFMHLQDDRTQKSIACDNNVSPSTVCRYLDKYDDLFRRNYNYLPEHLAMDEVRGVGGVLHFICINGAGDHEIQQILPDRLKQSILDYFNQFPLSVRQRVKTVTLDLNSYYQDIVKAVFPNAKIVVDRFHIVAMMTRAFNQSRVQLMKQYSKRTKEYRTLKFAWKLFLKHCDGLEVKQLFYDRHLRQQLTQQERVQLGLELDETLANTYTIMQGIMTCLKNHDKDGLVIYLYHNEQLSPKMKATLITFKKNLEIILNASESKYSNGPIEGINRMIKQIQRTAFGFRNYHHLVSRIKLQQMRTKPNKKTALEVA
>NZ_CP014623.1|WP_068224071.1|834745_835753_-|DnaB-like-helicase-C-terminal-domain-containing-protein
MTESRYYQGELEALAGRYAKYPTSENMIALGEMTELVRVLNLPELPTKKLSEYADDLRYYLDHSRSAGIKTFQQLNKVLGNGLCGGVLWTIGARPGVGKSAFGLSFIQSALAIDPEICVDHFSLEMTGEDNFNRTIAFHTGIPVNQLRNPKALLTPIQKKEVQQILPKITAQHVNLHDKILVLPQIIKVIRENAKKASEKGVNYFAIVDYLQIVSLARTKARVTDRRLEIEAITRELKLLTNELNIPIILFSQLNRELEKRVDRKPQLADLRESGSIEQDSNIVSFLYLEDQVQERSKIRNINLLFRKNRSGELAEIPLIFDTQQMKFMPLDSPK
>NZ_CP014623.1|WP_068224068.1|833799_834564_-|peroxide-stress-protein-YaaA
MKIIIAPAKKMKIDTDSFPIAALPQYLSEAQQLLLTMRQLSYSDLKTLWQCSDKLAQTNYDWLQQMALKEQLTPALLAFSGIQYQYMAPDVFTAAALTYVQANLRILSGFYGILRPFDGVVPYRLEMQAHLKSGQSTNLYDFWGAKPYQALHAQAEPIINLASQEYAKIIQRHLQPNVQLIDIVFGHWVDGKIKTRATLAKMARGEMVSFMAENNIKKLADLRHFDRLNYHYTPELSDETKLVFVKQQSATNQI
>NZ_CP014623.1|WP_068224066.1|832980_833346_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MVTIPKQGDFVWLDAEPHAGHEIGGHNQSKRNIARPFLVVSTTEFNQNTPFVQVMPVTHTLRDDDPLMMQVVDPKLRLSGMVLFAQLKGYDYRARHGTIIGQCRPNVLKTALNVISNIYGL
>NZ_CP014623.1|WP_068224090.1|846858_847119_-|hypothetical-protein
MGLFNNNSNKTLITMGQALEGYQSTGNVVFSEGKSLQKTIENACSLAVKQGNIGICNVKFASENEASGTGTGTKKYVVMADMMVSQ
>NZ_CP014623.1|WP_068224092.1|847517_847853_-|hypothetical-protein
MTTDSDGVAIISEKTNTDASVTTGITHTTKANLQGRFKVSYNLVSPKKKTVNITVTKDGTTATDSVIVKPSHRFIAKKNKLKIASSKRETAMKTSTSHSRTTVSNDVKEHL
>NZ_CP014623.1|WP_068224094.1|848040_848610_-|DUF5067-domain-containing-protein
MKLRKLGLGGLISVSLLGMGAGVFTPTFNQSSQVQAATKYKFKKNAVVIHDLKIKINKVKFLKPSDTDDHNRIIFEYTITNRTKKDIDAISGWQAVFNAYQKNKNTEGELEVGSTPNGYDTELKNQSQKINKGGSVKGVATYNLDNTSTPVVLKATQGVDGKKLGQKAYKVTKLQEEAPLNLDSSSSAK
>NZ_CP014623.1|WP_068224095.1|850260_850845_+|DUF1819-family-protein
MHYQTTLSTRPFMYLETKKVAQRLQDGQSLAEVRSAAIEQNFLQLPSRSRQLAAINVILKRLGTLDVYLVHQFLIADRETSNLILLYAIMASDQLFQEFMREVYLQRITGMETSLTKQDVLKFLAEKSTQSEKVARWTGATQNRLAAAYLQVLRDSGLMRAGQLVKGILAADVAQYLHQYGKQSLYEVLIGSRV
>NZ_CP014623.1|WP_068224097.1|850847_851426_+|DUF1788-domain-containing-protein
MRTTAQRLNALQDKLLAEQFVHNTGLGNEVGFYIFDYVPQDELLVRARIVEIQQYTEKRLQVKIQNFDLFKIVLQFFESRGYMDKNFQMEAKRGSAILFERMQKALKLATNRDELVGYITAHYDPNAIIFLTGVGTAYPIVRSHNLLNNLQPLITQMPLVLFYPGTYSYNKLKLFDQLDDDHYYRAFRIVGD
>NZ_CP014623.1|WP_068224099.1|851505_855159_+|BREX-system-P-loop-protein-BrxC
MEIKQLFKKPIEREIEGVIKIGQGANDHTFQELDEYVITDEIEQHLTTFFAAYDHSLAQPTDQIGVWISGFFGSGKSHFLKILSYLLRQDLQVASKRPLDFFTDKLTHNPKLLAQMQKALTVPNDVALFNIESKSEADSMQQKSAVVKVFNKVFNEIRGFSGANAWIAEMEETLANKGQYTAFKQAFADKADGLSWVEGRDEIFYNEDAAIAALVETTDMSEESARHFMEAGESSYTISDESFAKRVQKYVAQQPANYHLVFMADEMGQYISENGQLMLDLQMVVEDLAQYCHGQVWVVVTSQQDIDSLKKGGMSSNDFSKIQGRFNARLPLSSANADEVIKKRLLAKTPAAVTELASIYTANEAILKNKLTFTNDTAQMQGFTDQNEFVASYPFIPYQFNLLQKVFTGIREHGSVGKRLSSGERNLLSAMQFAAITYEHAQPNVLVPFDIFYKNIEAALENLVRSPIIQAESNAKLNDFDVRVLKLLFLIRYVKEIPANIDNLTTLLIEQIDEETLTLKEKVQKSVNRLEREFLIQRRGSEYVFLTNDEQDINREIQNVTVSNNDVVKYLGETIFTDILQLKQYRYQPFAKQPGLNYNFELNQWIDMVPIKTARSALTLQIISPNNLEVAGDEMAAAQSLEAGKVIVLLPEQGTYMDDIMNFKRIDQYLREPNHNQTDIYADILNHKSRERTALSVDIKTQVEAALADAKVFINGAVVKASGGSLISTALKQLIEVTYNKITYVTHNYDREDLTALFSTQGDLLSAQTTDPNHLATEAIFNDIEQRAARHIRVSLRELAESFSKIPFGWQETTILASLIRLLNDEKIQLRVQTERLIPEDNLTHFISLITRPREQEKIVVEQRVLIQERYVKAANELMKEMYNKTMTPAKDDERMVELQDQLRHTATELDALQRRYAGHNQYPGEQNINAELRILNSLIAQRDANQFFERVFKEQDELLELNDDNELVKQFFANQVEIFNAALIINTKYQRDRDYLTTATAKQSGKRIAEILGFAEPYALIKGLPELVKTYKEAIFTEIETAAAPIKQELANDQANMEATLTNAELQQKIKPQIEQQYRDLNRQLDDAGTIADVRGVMADKDITKGRFITLINKAQREIAAREVPVQPVPSKPVVSNGVHTFGVGTDTSGNGTTKIAETTPEPVAPAPKVNILARTAVLPEQQVVIHNEAELNAYLAEVQQHLQQELKGVDELRIM
>NZ_CP014623.1|WP_082920225.1|855312_855726_+|hypothetical-protein
MDKAALKKFAVNAKQHLLSSIQAYARNHYLLNDQQLPTIEHHAAGSLLILGGKKVKLNAIEEKEFRHLLAKIQDFQHDSTLAEALEQLFEEVAFTWFNWLVALRYWNYMIIYRLKCVFYLQKRPVKKSLTHYQVFMI
>NZ_CP014623.1|WP_156521539.1|855656_858890_+|BREX-1-system-adenine-specific-DNA-methyltransferase-PglX
MRILSSETAGKKEPDALSSIYDLVDDLALEPTILALINDDTDLTRSEKDIRLYQYLLKQQIKQLSQILPSVFYPVQGAESLLLPENLLQPQGIIADLLASGIPDEDWNNTEIIGWLFEYYNIEEKSKVGGLKNHSVSKRELPVVTQLFTPKWIVQYMLQNSLGNLYLGLHPDTSLTDQWQYYLGHAGNLVLPNDIQRLEDIKIIDPACGSGHILIEAFRMLYDMYLQQGYLPREIPRTIIENNLFSLDIDKRSIQITQIVLLMEMLAKTPRLLRAKQPVVFNVFEFQDSLQPTTIEALQSAFDSAEIEQIRVLEQQFTDAKQFGSLLQPATVDWQDFIQKISTLVSDQTDLYQQAQVTELRERLLPLFQCAWLLTQRYDVVVTNPPYHNKYNPTLKKFMQQHYKDVKSDLYSAFIKETFSMTKPNGYAALMSPYTWMFISSHEKLRRFIINNGTISSLVQLEYSAFEDATVPICTFVLQHQQENTQGVFLRLESFKGASAQPSKVAEAASDPTVDYRYVRDVHSFEDIPGAPIAYWASGRVRAIFRDNPKLGEIAEPRVGLQTGDNNQFLRLWYEVANNKTGFQIKSNNEAKDSGNKWFTTTKGGSYRKWYGNNDYIVNWENDGYEIKNYVDFKGKQKSRPQNINYYFKTGLTWSTTSSSEISFRLQQNSIFEHKGSVLFPKQKNDFYAIFGYINSKVPMLFLKALAPTLDFAEGAVAKLPYKPVSEIPEITDLVQQNTALSKSDWDAFETSWDFQQHPFLQYRTDTNLLADAFANWQTAAAQRFAQLKLNEEELNRQFIDIYGLQDELSPEETDKEVTVRQADQGRDVRSFLSYLVGVIFGRYSLDEPGLIYAGGTFDHTRYHTFQPDDDNVIPIGFAKGYYEDDIVTRIKQLLTLIFGAEQLMANLTFIANSLYPDSAQDPEEALRHYFLKDFYKDHLKIYQKRPIYWELSSGKQNGFKALIYLHRYTPALLAQIRTAYLLPLMRTIDRLLTLTNTEVDSTRAKAAAEKQRANYQRQLTELRQYETVVQYMANRELVLDLDDGVKVNYAKFQNIEVPSEDGTKTQKLNVLTKVKM
>NZ_CP014623.1|WP_068224101.1|859040_861563_+|BREX-1-system-phosphatase-PglZ-type-A
MATETQTLLQQRFDAPLPDYQQRRIIFWYDENQDYAQELAAYQLTNVVTLTVTPNNYFAVKYQIEVQQPEQNFLLYLPMSRPEPQSDPLHDIYLYSQPEFHVDRLSQVLDELHIEDQDAYRGTLLIYKNFFENKQRQKSLLTLLQNESAITPEKLTLGIFLVLVGGKRFSFANGLIYLLVEWAQEQDTAWQKLQRFGNLKWFWQQVKQNFNYQAKQPNLADLACALFTTKTAAEFNDRVPKNWQQRQLQPANNAIVFVDQWQNARDLTAEYEVVANRVSELLRIDDFTRGKSVDFLAQGNTFAAYDVALITLVAQQLIEGGVLYDDYELQLIKRRTDFWNNHFQASYRALIQAIRLLRSLANLTIDATTVQALWQQYQEQLMQLDQAYRKFYRAFDQISEPSDELRALQQKVEHFYTDGYLRPLAQRWDSLISEQLPLTQVLPTAAFYSKKVTHLVNDKRRVFVIVADALRYEIASQLQDELNRNQHFDTELEALEGTVPSYTDLGMAALLPHKQVALNAKGNIEVDGQLSAGVENRQRILAKELPDLKVTAQTAKSILAANRDQLRQLYKGTNVNYIYLDAIDARGDNAKSEDEVFAAVDLVLQQLQELVGTLARYVNATTFFVTADHGFLYTRQALTKLDKIEQPAGIVHKRRFVMNTDKIPASNTHTFALPNLAPGNLAVHVPAELLRYAVQGGGSKYVHGGTTLQEIMVPLLTIKTERNARSPQQVDVVLLTELTTVGSYNLTLSFIQIQPVSNLRRSKQILVYLEDTTGKVISNQITLIADYHNDSVQQRTLTGKLIIANDISPRYQQGTLVIVNAANPKDTQCQTVNLDLPEIK
>NZ_CP014623.1|WP_068224105.1|862546_863032_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MRRKEREVTNQKEIMALLQSAHVIHIGIQATDYPYVVPTNYGFEFVAGQLIIYVHGAPIGRKRDLIAKQPKVGFEIDDGNHLMASDNGDPGRNSFAYHSIIGTGNAELVADFVTKKHALQTILVHETGHTWANIKDHDVDYVGIIKIIVNQYSVKAHHDPK

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Crispr_ID: NZ_CP014623_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014623_3

2175511-2175598

Orphan

Consensus_repeat	Method
AAAAACCGCATCACTTATGATATGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014623_3

>merge|NZ_CP014623|3|2175511-2175598|CRISPRCasFinder
AAAAACCGCATCACTTATGATATGGAGACCCCTATCGATCCGGCCTGCGGTTAATATCACGAAAAAACCGCATCACTTATGATATGGA

>NZ_CP014623|3|3|2175511-2175598|CRISPRCasFinder
AAAAACCGCATCACTTATGATATGGA	GACCCCTATCGATCCGGCCTGCGGTTAATATCACGA
AAAAACCGCATCACTTATGATATGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014623.1\|WP_068225890.1\|2165181_2165715_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379534
NZ_CP014623.1\|WP_068225900.1\|2180462_2181275_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293819
NZ_CP014623.1\|WP_068225892.1\|2166972_2168961_-\|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	unknown	unknown	gnl\|CDD\|223556
NZ_CP014623.1\|WP_068225905.1\|2188502_2189267_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP014623.1\|WP_068225888.1\|2163426_2164320_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|180458
NZ_CP014623.1\|WP_068225903.1\|2183511_2185404_-\|cell-wall-metabolism-sensor-histidine-kinase-WalK	unknown	unknown	gnl\|CDD\|380161
NZ_CP014623.1\|WP_068225904.1\|2185595_2186309_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP014623.1\|WP_068225899.1\|2177385_2178663_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_CP014623.1\|WP_068225893.1\|2169585_2170539_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381318
NZ_CP014623.1\|WP_068225891.1\|2165858_2166698_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|180448
NZ_CP014623.1\|WP_068225896.1\|2173842_2174361_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|274100
NZ_CP014623.1\|WP_068225889.1\|2164449_2165064_-\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|274100
NZ_CP014623.1\|WP_068225897.1\|2174447_2175281_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP014623.1\|WP_068222100.1\|2179084_2180368_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP014623.1\|WP_068225894.1\|2170772_2171828_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014623.1\|WP_056973869.1\|2186512_2187871_-\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_CP014623.1\|WP_068225895.1\|2171958_2173086_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|310737
NZ_CP014623.1\|WP_068225906.1\|2189349_2190525_-\|putative-hydroxymethylpyrimidine-transporter-CytX	unknown	unknown	gnl\|CDD\|274096
NZ_CP014623.1\|WP_068225902.1\|2182193_2183522_-\|regulator	unknown	unknown	gnl\|CDD\|369363
NZ_CP014623.1\|WP_068225901.1\|2181365_2182193_-\|two-component-system-regulatory-protein-YycI	unknown	unknown	gnl\|CDD\|378229

Protein	Function_ID	Function_description	E-value
NZ_CP014623.1\|WP_068225890.1\|2165181_2165715_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	2.1254e-11
NZ_CP014623.1\|WP_068225900.1\|2180462_2181275_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293819	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YycJ protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	3.33288e-65
NZ_CP014623.1\|WP_068225892.1\|2166972_2168961_-\|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	gnl\|CDD\|223556	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].	3.37888e-123
NZ_CP014623.1\|WP_068225905.1\|2188502_2189267_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	9.00114e-76
NZ_CP014623.1\|WP_068225888.1\|2163426_2164320_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|180458	PRK06194, PRK06194, hypothetical protein; Provisional.	3.64752e-71
NZ_CP014623.1\|WP_068225903.1\|2183511_2185404_-\|cell-wall-metabolism-sensor-histidine-kinase-WalK	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	0
NZ_CP014623.1\|WP_068225904.1\|2185595_2186309_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.96928e-97
NZ_CP014623.1\|WP_068225899.1\|2177385_2178663_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	7.18678e-79
NZ_CP014623.1\|WP_068225893.1\|2169585_2170539_-\|aldo/keto-reductase	gnl\|CDD\|381318	cd19092, AKR_BsYcsN_EcYdhF-like, Bacillus subtilis YcsN, Escherichia coli YdhF and similar proteins. Bacillus subtilis YcsN and Escherichia coli YdhF are prototypes of this family. They are uncharacterized aldo/keto reductase family oxidoreductases.	4.13618e-124
NZ_CP014623.1\|WP_068225891.1\|2165858_2166698_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|180448	PRK06182, PRK06182, short chain dehydrogenase; Validated.	2.40741e-95
NZ_CP014623.1\|WP_068225896.1\|2173842_2174361_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|274100	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator. The seed alignment for this family was built from a set of closely related uncharacterized proteins associated with operons for the type of bacterial dihydroxyacetone kinase that transfers PEP-derived phosphate from a phosphoprotein, as in phosphotransferase system transport, rather than from ATP. Members have a TetR transcriptional regulator domain (pfam00440) at the N-terminus and sequence homology throughout.	3.78378e-10
NZ_CP014623.1\|WP_068225889.1\|2164449_2165064_-\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	gnl\|CDD\|274100	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator. The seed alignment for this family was built from a set of closely related uncharacterized proteins associated with operons for the type of bacterial dihydroxyacetone kinase that transfers PEP-derived phosphate from a phosphoprotein, as in phosphotransferase system transport, rather than from ATP. Members have a TetR transcriptional regulator domain (pfam00440) at the N-terminus and sequence homology throughout.	1.26595e-19
NZ_CP014623.1\|WP_068225897.1\|2174447_2175281_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	5.8661e-12
NZ_CP014623.1\|WP_068222100.1\|2179084_2180368_+\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	1.20709e-50
NZ_CP014623.1\|WP_056973869.1\|2186512_2187871_-\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.44686e-17
NZ_CP014623.1\|WP_068225895.1\|2171958_2173086_-\|hypothetical-protein	gnl\|CDD\|310737	pfam06347, SH3_4, Bacterial SH3 domain. This family consists of several hypothetical bacterial proteins of unknown function. These are composed of SH3-like domains.	2.9034e-05
NZ_CP014623.1\|WP_068225906.1\|2189349_2190525_-\|putative-hydroxymethylpyrimidine-transporter-CytX	gnl\|CDD\|274096	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX. On the basis of a phylogenomic study of thiamine biosythetic, salvage, and transporter genes and a highly conserved RNA element THI, this protein family has been identified as a probable transporter of hydroxymethylpyrimidine (HMP), the phosphorylated (by ThiD) form of which gets joined (by ThiE) to hydroxyethylthiazole phosphate to make thiamine phosphate. [Transport and binding proteins, Nucleosides, purines and pyrimidines, Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	2.13992e-98
NZ_CP014623.1\|WP_068225902.1\|2182193_2183522_-\|regulator	gnl\|CDD\|369363	pfam07435, YycH, YycH protein. This family contains the bacterial protein YycH which is approximately 450 residues long. YycH plays a role in signal transduction and is found immediately downstream of the essential histidine kinase YycG. YycG forms a two component system together with its cognate response regulator YycF. PhoA fusion studies have shown that YycH is transported across the cytoplasmic protein. It is postulated that YycH functions as an antagonist to YycG. The molecule is made up of three domains, and has a novel three-dimensional structure. The N-terminal domain features a calcium binding site and the central domain contains two conserved loop regions.	3.46456e-24
NZ_CP014623.1\|WP_068225901.1\|2181365_2182193_-\|two-component-system-regulatory-protein-YycI	gnl\|CDD\|378229	pfam09648, YycI, YycH protein. This domain is exclusively found in YycI proteins in the low GC content Gram positive species. These two domains share the same structural fold with domains two and three of YycH pfam07435. Both, YycH and YycI are always found in pair on the chromosome, downstream of the essential histidine kinase YycG. Additionally, both proteins share a function in regulating the YycG kinase with which they appear to form a ternary complex. Lastly, the two proteins always contain an N-terminal transmembrane helix and are localized to the periplasmic space as shown by PhoA fusion studies.	4.32039e-47

>NZ_CP014623.1|WP_068225897.1|2174447_2175281_+|alpha/beta-fold-hydrolase
MQIKTNDNTLLNVNKVGHGPILILIPGANGTGDIFYTTAETLKNNFTVITYDRRGYGKTVVPTPLPANASDPDSNYRIDKDVDDIFALADTFSPNEPVYLMGSSSGSIVAEKAFSKNPNHFVKVSIHESPLATVIDDGGQFKKESAQIVQKVLDGNFGAISDLFVDQMHIQPLDAKMMGLATDSKPDPAKMKSILFWLKYESAQYTSQVIDWNIFKNNSEKVILLNGTDSTGFFPQTVNQAISKKIDVPITMISGGHLGYAQKPEKFADTLTDALLK
>NZ_CP014623.1|WP_068225896.1|2173842_2174361_+|TetR/AcrR-family-transcriptional-regulator
MPQTTNNSLTRFKNAFASLLISRPLSTITVQDIVRKAGVNRSTFYRHFLDLDDFLDWLEEEMLVEITTHFQLSENKNIDFTQFYQYTNENRILLQGFLETNRWNHFIDRLQTIVLKNYLKLLSTQATTIPIEIQVQFFIGGHINLFKWWLDQENPPTPEKMATYHQKLSQPR
>NZ_CP014623.1|WP_068225895.1|2171958_2173086_-|hypothetical-protein
MVTEHPNTTGLINAANENYKNIINTLNMKSTSAQVGIVSGSRWESAFTKISLMPEVKWANGLSRSLNSTGAMKSLPKIAAGAIILPNDQLSHTLKLMGVSGLQKSALQSIKAMEHNSVWNKFGVKSGLSGALQSVVNDKAKVFQTTFASPTLSKIAARQLGQLHIADQMGIVATNSALLRGATLQPTLNKILSNLNTEQTDKLNNAFNEFTENLPEDDANSETTIDKQVAKEVAESFKTGNISKLSHKGRIFFQQILLLLLPLLIEPILGATPIGQSINQWLQVDLGNYTDLVIEGNGINPKQPKHAYRTVRVDGLTLRNRPKQHAKIINVLGEGTVVKVVQTKRHWKRVVVADANGTQIFGWTNTTYLKVIKTY
>NZ_CP014623.1|WP_068225894.1|2170772_2171828_-|hypothetical-protein
MIINPTKKALPIFNKLVKVEDAAMAKRFATVNPLFSWHANYYLVNRKKVVLLVNDLTYAAVALYDINAKNKVNLEQYINDGIREAFLLVGVAPEDIAAYFELAGAVRLNAGFNRQVTGAVTNMILMVKEGRLIDRTKLIQTKLMDYLMQIPFSQKDYAFAKDSVANAFATGLSITKVNAAEMQVSEYHVDRTWLDYHQWDKYQDSEALFAGDGHLYEQIGAKVLANNALLLAEFKNYLINSTGLTEKTAKKHVKNIELFINEFMLFDTIKTPLTTVDAVQPYLADWFPRKIAYSASEIKANATSIKKFIKFMEVAGEISQVDAEQARAEIKDDIEFGIEYLQLMDSMTDFW
>NZ_CP014623.1|WP_068225893.1|2169585_2170539_-|aldo/keto-reductase
MKLFPLGSSNIMVSNIAAGGMRYASLNLAQMQKLMQVEIDNGINFFDFADVYGGGQSERIFGQALKQSSIKREDLIIQSKVGLTDFGYDFSKEHILNSVDGILRRLQTDYLDVLLLHRPDPLMEPAEISSAFNQLRQSGKVREFRVSNMNTFQIEFLQSALNRPLLVDQVQFSLMHTGMIDFGIHTNMKDSLSIDHDGGLLPYSQKNKITLQAWSPLQYEGPVNGGFINGQWQFHGLITDNPEIPQVNKVLDQIAKIHGVSKTAIATAWILRHPAHIQMIAGTTNPQHLSDILEANEVQLSRQEWYALYLAGGHTLP
>NZ_CP014623.1|WP_068225892.1|2166972_2168961_-|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein
MKHIVAGIIAHVDAGKTTLSEALLYRAGELRKLGRVDKGDAFLDPDKLEKKRGITIFSHQASLQYRDLKLTLLDTPGHVDFATQTEQVLSVLDCAILVISATDGIQGYTRTLWRLLEHYSVPTFIFVNKMDTNGADKAQVLNQLQNTFSPGCIDFNSDEQGQNTDFSAEAAEEIAVRDDKVLENFLTSGALDDSTVRQMIGRREVFPCYFGAALKVAGVDNLLAGLERWTNAATDKQDFGARVFKISYDEKGERLTWIRVTGGALRTKDVLLNEQKANQLRVYNGTKFTACQKISAGDICAIAGLTNTYPGQGLGDEVDGATPVIQPVLNYALDPKAYDIHVCLAALRQLEDEDPQLHVSWSSHLQEIRVQIMGEVQLEILQQILLERFNLDVSFGKGSILYKESITQAAEGVGHFEPLRHYAEVHLLLQPAPRGSGLTFAANCSLEVLGRNWQHQVLANLRAKEQLGVLTGAPITDMRVTLVGGRASIVHSVGGDFREATWRAIRQGLMMLKKRGACQLLEPWYQFRLEINQDQIGRAMSDIERMSGSFAAPEVTAISGVGPTTLTGFAPVSEMQDYAQEVHAYTHGQGQLECIVAGYRPCHDVKAVMADLKYDPVADLDNTPGSVFCAHGAGYPVAWDQVPQMAHFPYVYSAADLIKLMK
>NZ_CP014623.1|WP_068225891.1|2165858_2166698_+|SDR-family-NAD(P)-dependent-oxidoreductase
MPTKKVIAITGASSGMGKAALQLFAQRGWTVYGGARRVEKIPTGTNIHAVKLDVTDSESNHTFINTILNEQHRIDVLINNAGYGEGGPIEDIDLKNVRKQFETNFFGAAELTKLVLPTMRSQKTGRIVNISSIGGDLYMPLNAYYHASKAALQQWSDSLDLEVQQFGIRSVIVQPGGTQSAWGDIAVQNMRKNLKTDSAYLPLVNTLSNILSSSSNMISATSADLARVFYAAATDRNPKRRYFNSFGDRFVVHVARAHPKVFHAASSALLRHLDRRSHR
>NZ_CP014623.1|WP_068225890.1|2165181_2165715_-|TetR/AcrR-family-transcriptional-regulator
MADQSKAIEEYLLGALKRLLKKKTFDEISITELTKVAGISRMTFYRHYQNITDILTNEMAEIVNELTDKLGSKTVVQHEGLVFIMQFLKDHASFIRILLLAQQQDILRDNISQVLAKLSANKKKLQNLNAREIDYYVRYHSTGLTSVIIDWVTKKQPETPEELATFLEKIGEGSNQS
>NZ_CP014623.1|WP_068225889.1|2164449_2165064_-|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein
MKNNEISLTTKQTFAKALKQLMGRQPFETITVRQLLALTAYTRPTFYYHFHSTTDLLKWTFVNEALSLLQRSPEYHTWDEDIFLLLKYLKANEKQYRSFYATMDLEQMNRIFREPIQTVLMGYIDYILRTHHLAVSKEDQDFIVRFFTGGFVSIVVDWLNTGLQTSPEFIRQQILDTQDNIIIFSLETANKKNKLNKNGDLLDI
>NZ_CP014623.1|WP_068225888.1|2163426_2164320_-|SDR-family-NAD(P)-dependent-oxidoreductase
MDNFKDRVILITGSAHGFGAAIAKEAAQRGMKLALADIDEPALKDIYDEVTTLGADAEMIPTDVTEETAVDNAVATTMKRFGQIDVLVNSAGVAVPGSIWELPTRDWEWILHADVMSQVYALQQVIPIMMKQPDGGDIINVASMAGLITSPLMPAYYASKFASVGMTEAVEYDLQAAKANVRMHVFCPAFVQTDLYHSEQHRPAKYTNTSDPYYTSKVFKDGQKFAENDIKTGMSINTIPALIFTALEKNEFYILSHPAVNPLIVARAQGIVNGQGPDLNLITKYLDKTHGEKPAAK
>NZ_CP014623.1|WP_068225899.1|2177385_2178663_-|trypsin-like-peptidase-domain-containing-protein
MQNKPSSGLIRTAIVAVVAAVIGGGVVYGGANFFNSGSDSNGSVVNTSKAGSTKVSNVKVSTNSQVSNVFNHTKNSVVSVVNLQKQSSSDSSGLSEYFGGSNSSSDSSSSSSSKDLTEYSEGSGVIYKKASGKAYIVTNNHVVSGSEKLEVILSNGTKLDAKKVGTDSVTDLAVLSIDSAKVTQVASFGNSDSIKVGEPAIAIGSPLGSEYATSVTQGIISAKKRTVPVQDETTGQETGEATVIQTDAAINPGNSGGPLLNIQGQVIGINSMKLSGTGTSSSSSSNATVEGMGFAIPSNEVVKIIDQLVSNGKVVRPALGISMVDLSNISSAQQKSILKIPSSVTGGVVVMSAKSNSPASNAGLKKYDVITQLAGKKVDSSADLRSELYNHNVGDTVSVKYYHDGQEKSGSIKLSENTSQLDITD
>NZ_CP014623.1|WP_068222100.1|2179084_2180368_+|ISL3-family-transposase
MNPIDNHIKFALSIKDPNVIFFDYGYEYKQNRRIKVYRATVKTSLKRCPQCGFDQFNHNGHYRARVTYLAANASEPVYLELHKERLLCKNCGTSVMATTELVDKYCNISRATRQKIFMHLQDDRTQKSIACDNNVSPSTVCRYLDKYDDLFRRNYNYLPEHLAMDEVRGVGGVLHFICINGADDHEIQQILPDRLKQSILDYFNQFPLSVRQRVKTVTLDLNSYYQDIVKAVFPNAKIVVDRFHIVAMMTRAFNQSRVQLMKQYSKRTKEYRTLKFAWKLFLKHCDGLEVKQLFYDRHLRQQLTQQERVQLGLELDETLANTYTIMQGIMTCLKNHDKDGLVIYLYHNEQLSPKMKATLITFKKNLEIILNASESKYSNGPIEGINRMIKQIQRTAFGFRNYHHLVSRIKLQQMRTKPNKKTALEVA
>NZ_CP014623.1|WP_068225900.1|2180462_2181275_-|MBL-fold-metallo-hydrolase
MDNKDDQLKVSILSSGSTGNVTYIETPQRKILVDAGLSGKKIENLMKNIGRDLTEVDDLLVTHEHTDHIKSVGVLARRYHNLNIYANKLTWQAMLPKIGKVPENQQQIFDTGSFKELGDLDVQSFGVSHDAVDPQFYEFQHAGKTFVILTDTGYVSERLSAEINDADAYLFECNHDVEMLRMGLYPWPLKQRILGDKGHLSNEAGADGLMSVIGNRTKKVFLGHRSLHNNMKELCHLTVSSMLKEHDYGVDHDFKLYDTEPDDASPLMII
>NZ_CP014623.1|WP_068225901.1|2181365_2182193_-|two-component-system-regulatory-protein-YycI
MDFKRIEIIFLVVFACLDIFLFVSYQQNQNIEMIDSSVSRNTTIKREMSNDQVTTPHLSSKTYTGYYLASKPNRTLQEQSERLTGQRVTFNDNRLYGHFYNSISARSNLRLINQLKEIMKNEHQILHGDQYRYSREFSTADRLVFTQKISEGDLYDEAGELVFQVNDNHQVTNYQQTYINRLTTLQEKEQTISAKQAVQDLYTDNEISSGATIKWTSVGYSRLLDVNNSSVYIPAWFIAIENKNSGNIQIKRINAFTGALMKNNNDNSLATTASN
>NZ_CP014623.1|WP_068225902.1|2182193_2183522_-|regulator
MKIKNLILRVSLSVLIVISIILSGLIWTNNARFQRNTTDVTPQQTQLDTKNLAAVYLPTQIMATTKQGQKNLIYNKKENLIDTLRSDVKKWRFGRPTTVKLTAKQYLKLINRGNMLSINYPSNVSYSIFGQTFGQKVSQQDRNKNFNRLLIPLGKKGVVYLLSDRQTHGYRVKVSKQNLAVLKKAINKATVKMPINEQLMNKRPQIFYEQSVQVAQYSYLLNKQNPTDFVTALLDGKSPNSVDSKEVGDSTIYNDGTYKSLQVNHKNGTINFEDYSTSNTAKNTTSILTDSFRELSNLGNTPVNMRYFYYNPQDRTVVYRSYVEGFPVFNQTNFGTVKVQLMATGNKLDFSVYSLQVPLPSDKQAVTLPTTQNMLDQLQNAGYNLTDVKTVQLGYHWQVNHSSDSVIDLTPTYYINYNGSWLSLSQMLNTDQNEDSSSEEAN
>NZ_CP014623.1|WP_068225903.1|2183511_2185404_-|cell-wall-metabolism-sensor-histidine-kinase-WalK
MNKKIHFFQSINFKIALVFILLLMVTLEIIGAYFVKQLEQQNIQTFKQQVQTPAYVNNQLADDLLKTDATSANKEIGNVLADLNNSADIRVVDSKGIIRGTSDVNDQGEVGQKTPDSDVKNVLYNNRSYETLSYDKKNQASYYVTIVPLINPSGDSNSVVGAIYVRANMESVYKGINSITIIFLTASLVAALFSSVIAIVISRAITRPIDEMKKQAIRMARGDYSGQVRIYGQDELGQLAVAVNNLSVRVEEAQEASEAERRRLDSVLSHMTDGVISTDRRGNVIIINEAAADFLDVDDSAVIGQSILQILKIGNDHTIRDLLENQTELMLDFSSHEHDLILHAEFSLIQRETGFISGIVCVLHDVTEQQKDERERRQFVSNVSHELRTPLTSMRSYLEALTDGAWKDPKVAPDFLHVTQEETDRMIRMINDLLSLSRMDSGTVKMDMELVNLNELFNYVLNRFDMMIKADTSAADNNRTEARNLPANKKYSIKREFTKRDLWVEIDTDKFMQVIDNIMNNAIKYSPDGGVVTCRLLETNNHVILSISDQGLGIPKKDLPHVFDRFYRVDKARSRAQGGTGLGLAISKEVVEALNGRIWVDSEEGKGSTFYISLSYQPYDEEEDDLWDEN
>NZ_CP014623.1|WP_068225904.1|2185595_2186309_-|response-regulator-transcription-factor
MAKKILVVDDEKPISDIVKFNLTKEGYDVVTAYDGEEALEKVSEENPDLIILDLVLPKIDGLEVAREVRKDHDMPIIMLTAKDSEIDKVLGLEMGADDYVTKPFSNRELVARVKANLRRQGTINNAQQQENDENNEIQIGDLTIHPDAYIVSKRGDKIELTHREFELLHYLAQHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPEWLVTRRGVGYYLRNPEAE
>NZ_CP014623.1|WP_056973869.1|2186512_2187871_-|transposase
MNIIRQKNTENELHNIVHQFTSLIGLSKLTKLVNYRRHSEISLMKVIEWLLTTKFLGRSLYRAHETPNFTSRTVRNNLNDGRINWQRLICQVGSHLIKHLRPFIDRRRRLALIIDDTLFSREYATQTELLARVFDHDKQLYIKGYRALTLGWSDANTFLPINFALMSSKKPQNVLGKSAKTTDQRTIAGRRRRQAQQKMNLVSLQLVKQALANGVLADYVLFDSWYSSPKMFYELTKLGLNGVGMLKRSSKIYYQYRGRQYSVKALYKRLQASKYQPKQAYQYSCFVEAHVGNQKFKLRLVFVANRARQDDYLVLATTQLGLQPQEIIQLYARRWQIENYFKVAKQYLRLDKSQVQNYDGLCGHLAIVMMTYDLLAWQERQNQDDRTIGDLFFIMNEAMPDIELSQALVWLLNSLKTIINHEVYARRAQIIQMMNQFFTFLPKRLVSLLTAS
>NZ_CP014623.1|WP_068225905.1|2188502_2189267_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MRPRIAMPADTLTEATNIINERNADFTPRMAVNAVLKSGGLPVILPNSAPENVADYLDSFDGVLFLGGFDVDPTFYNEEPDMNLGQTYIPRDEFEIELVKQAVAAGKSIFGICRGMQVINVALGGTLYQDLSEDPTAKLKHAQTAPGNLPTHHVTVEKNSRLYKIMGERPYVNSRHHEAVKLVAPSLNVVARSDDQVVEAVESKVNNQILAVQWHPENMYKHAVAMQDLFRDFIQRSGAAALAKTAAPQLKVVK
>NZ_CP014623.1|WP_068225906.1|2189349_2190525_-|putative-hydroxymethylpyrimidine-transporter-CytX
MKENSRISGQFLLWLGAAISIAEIITGTLIAPLGLAKGFLAILVGHILGCFVFLLPAAIMGGRQRRTAIASTHFAFGHLGVQLFSLLNALQLIGWTAVMIANAISALNGVSGRLFNFKSALFMGLIMAALLIFWLLINNDWLFRINNLVVALLFVGSLIMLWLVLRIPQHASVLTGNSITFGAAVELGVTMALSWLPLIADYTSQTEEPIKVSWASTAGYFIGSLFMFSIGLLAAVRTGKTDITTILVSSGLGILALFIIIFSTVTTTFLDAHSAAVNVHNIWKKLNLKWLASGVVLIGLIIALVVPLSLYQQFLYLIGSIFAPLYTIVFVNYFLLKRPLKIKLNFIFWLVGVVGYYWLQQFNFILGTTTSELLLLGSIVWITGYFINRSK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP014623_2	2.2\|844564\|30\|NZ_CP014623\|CRISPRCasFinder,CRT	844564-844593	30	NZ_CP014623.1	1256220-1256249	0	1.0
NZ_CP014623_2	2.2\|844564\|30\|NZ_CP014623\|CRISPRCasFinder,CRT	844564-844593	30	NZ_CP014623.1	1499546-1499575	0	1.0
NZ_CP014623_2	2.3\|844630\|30\|NZ_CP014623\|CRISPRCasFinder,CRT	844630-844659	30	NZ_CP014623.1	1286112-1286141	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014627.1	535-564	0	1.0
NZ_CP014623_2	2.10\|845092\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845092-845121	30	NZ_CP014623.1	1263809-1263838	0	1.0
NZ_CP014623_2	2.20\|845752\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845752-845781	30	NZ_CP014623.1	1513400-1513429	0	1.0
NZ_CP014623_2	2.21\|845818\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845818-845847	30	NZ_CP014623.1	1530415-1530444	0	1.0
NZ_CP014623_2	2.19\|845686\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845686-845715	30	NZ_CP014623.1	1535300-1535329	1	0.967
NZ_CP014623_2	2.18\|845620\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845620-845649	30	NZ_CP014623.1	1521191-1521220	2	0.933

1. spacer 2.2|844564|30|NZ_CP014623|CRISPRCasFinder,CRT matches to position: 1256220-1256249, mismatch: 0, identity: 1.0

gcaagatgagatgcagcaatttgtgattag	CRISPR spacer
gcaagatgagatgcagcaatttgtgattag	Protospacer
******************************

2. spacer 2.2|844564|30|NZ_CP014623|CRISPRCasFinder,CRT matches to position: 1499546-1499575, mismatch: 0, identity: 1.0

gcaagatgagatgcagcaatttgtgattag	CRISPR spacer
gcaagatgagatgcagcaatttgtgattag	Protospacer
******************************

3. spacer 2.3|844630|30|NZ_CP014623|CRISPRCasFinder,CRT matches to position: 1286112-1286141, mismatch: 0, identity: 1.0

tgcttatgcttgtgtagaatattaatgtgc	CRISPR spacer
tgcttatgcttgtgtagaatattaatgtgc	Protospacer
******************************

4. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to position: 535-564, mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

5. spacer 2.10|845092|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to position: 1263809-1263838, mismatch: 0, identity: 1.0

catagctcatgggacgatgatgatttggtg	CRISPR spacer
catagctcatgggacgatgatgatttggtg	Protospacer
******************************

6. spacer 2.20|845752|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to position: 1513400-1513429, mismatch: 0, identity: 1.0

ttaattacgcggttaagcaaaagatcttag	CRISPR spacer
ttaattacgcggttaagcaaaagatcttag	Protospacer
******************************

7. spacer 2.21|845818|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to position: 1530415-1530444, mismatch: 0, identity: 1.0

tgttcaatcagcatggtaacgtcatcaatt	CRISPR spacer
tgttcaatcagcatggtaacgtcatcaatt	Protospacer
******************************

8. spacer 2.19|845686|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to position: 1535300-1535329, mismatch: 1, identity: 0.967

caatagcagaaaagtatgagcgatgtggga	CRISPR spacer
caatagcagaaaagtatgagcgatatggga	Protospacer
************************.*****

9. spacer 2.18|845620|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to position: 1521191-1521220, mismatch: 2, identity: 0.933

tcatctccttctacccgattgacccccatt	CRISPR spacer
tcatctccttcttcctgattgacccccatt	Protospacer
************ **.**************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014623_1	1.1\|779008\|46\|NZ_CP014623\|CRISPRCasFinder	779008-779053	46	NZ_LT907987	Lactobacillus sakei strain T332 plasmid p332A2, complete sequence	61903-61948	0	1.0
NZ_CP014623_1	1.1\|779008\|46\|NZ_CP014623\|CRISPRCasFinder	779008-779053	46	NZ_CP026117	Lactobacillus curvatus JCM 1096 = DSM 20019 plasmid pLDW-27, complete sequence	15282-15327	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	15733-15762	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	35877-35906	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_AP017974	Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067	56025-56054	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP042373	Lactobacillus malefermentans strain CBA3618 plasmid unnamed2, complete sequence	6590-6619	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP053341	Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence	7103-7132	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NC_017018	Pediococcus claussenii ATCC BAA-344 plasmid pPECL-7, complete sequence	5037-5066	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP012281	Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-6, complete sequence	12789-12818	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP042385	Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed2, complete sequence	10995-11024	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014921	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-6, complete sequence	12782-12811	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP035024	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD	3060-3089	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP035024	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD	40101-40130	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP016492	Lactobacillus pentosus strain BGM48 plasmid pBGM48-1, complete sequence	4117-4146	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NC_018699	Leuconostoc carnosum JB16 plasmid pKLC4, complete sequence	15971-16000	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_AP018407	Lactobacillus plantarum strain SN35N plasmid pSN35N-2, complete sequence	16953-16982	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_AP018409	Lactobacillus plantarum strain SN35N plasmid pSN35N-4, complete sequence	40271-40300	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP020733	Leuconostoc mesenteroides subsp. mesenteroides FM06 plasmid pLm2, complete genome	3695-3724	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014901	Lactobacillus backii strain TMW 1.2002 plasmid pL12002-2, complete sequence	17785-17814	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP013153	Lactobacillus plantarum strain MF1298 plasmid pMF1298-3, complete sequence	6770-6799	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NC_022123	Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 2, complete sequence	27313-27342	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NC_021234	Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp4, complete sequence	714-743	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP042386	Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed3, complete sequence	21293-21322	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014930	Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-6, complete sequence	22658-22687	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP029547	Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence	69449-69478	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014875	Lactobacillus backii strain TMW 1.1989 plasmid pL11989-2, complete sequence	16405-16434	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014627	Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence	535-564	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP018765	Pediococcus acidilactici strain BCC1 plasmid pbcp2, complete sequence	11184-11213	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NC_016821	Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence	7810-7839	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP035748	Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed2, complete sequence	16105-16134	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP035750	Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed4, complete sequence	19937-19966	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014603	Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence	1944-1973	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014603	Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence	26492-26521	0	1.0
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP028237	Lactobacillus plantarum strain SRCM101511 plasmid unnamed2, complete sequence	39978-40007	0	1.0
NZ_CP014623_1	1.1\|779008\|46\|NZ_CP014623\|CRISPRCasFinder	779008-779053	46	NZ_LT907987	Lactobacillus sakei strain T332 plasmid p332A2, complete sequence	25461-25506	1	0.978
NZ_CP014623_1	1.1\|779008\|46\|NZ_CP014623\|CRISPRCasFinder	779008-779053	46	NZ_CP042372	Lactobacillus malefermentans strain CBA3618 plasmid unnamed1, complete sequence	23866-23911	1	0.978
NZ_CP014623_1	1.1\|779008\|46\|NZ_CP014623\|CRISPRCasFinder	779008-779053	46	NC_003320	Lactobacillus curvatus strain CRL705 plasmid pRC18, complete sequence	4564-4609	1	0.978
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP047122	Lactobacillus hilgardii strain FLUB plasmid unnamed1	10512-10541	1	0.967
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP014896	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-6, complete sequence	8007-8036	1	0.967
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NZ_CP019983	Pediococcus inopinatus strain DSM 20285 plasmid pLDW-13, complete sequence	25180-25209	1	0.967
NZ_CP014623_2	2.5\|844762\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	844762-844791	30	NC_008502	Lactobacillus paracasei ATCC 334 plasmid 1, complete sequence	29030-29059	3	0.9
NZ_CP014623_2	2.14\|845356\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845356-845385	30	AP018361	Lactobacillus phage T25 DNA, complete genome	35175-35204	5	0.833
NZ_CP014623_2	2.25\|846082\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846082-846111	30	NZ_CP047429	Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence	87311-87340	5	0.833
NZ_CP014623_2	2.25\|846082\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846082-846111	30	NZ_CP047445	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-8	14176-14205	5	0.833
NZ_CP014623_2	2.25\|846082\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846082-846111	30	MN694732	Marine virus AFVG_250M550, complete genome	26178-26207	6	0.8
NZ_CP014623_2	2.33\|846608\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846608-846637	30	CP054320	Escherichia coli strain SCU-390 plasmid pSCU-390-2, complete sequence	35187-35216	6	0.8
NZ_CP014623_2	2.3\|844630\|30\|NZ_CP014623\|CRISPRCasFinder,CRT	844630-844659	30	NZ_CP031178	Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_D, complete sequence	18168-18197	7	0.767
NZ_CP014623_2	2.3\|844630\|30\|NZ_CP014623\|CRISPRCasFinder,CRT	844630-844659	30	MH675552	Bacteroides phage crAss001, complete genome	86267-86296	7	0.767
NZ_CP014623_2	2.3\|844630\|30\|NZ_CP014623\|CRISPRCasFinder,CRT	844630-844659	30	MT774388	CrAssphage cr112_1, complete genome	83277-83306	7	0.767
NZ_CP014623_2	2.19\|845686\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845686-845715	30	NZ_CP039853	Salinimonas sp. KX18D6 plasmid plas12, complete sequence	78034-78063	7	0.767
NZ_CP014623_2	2.19\|845686\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845686-845715	30	NC_015498	Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01, complete sequence	217491-217520	7	0.767
NZ_CP014623_2	2.21\|845818\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845818-845847	30	NZ_CP014208	Pantoea ananatis strain R100 plasmid, complete sequence	200309-200338	7	0.767
NZ_CP014623_2	2.21\|845818\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845818-845847	30	NZ_CP035036	Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence	96689-96718	7	0.767
NZ_CP014623_2	2.21\|845818\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845818-845847	30	NC_017553	Pantoea ananatis PA13 plasmid PAGR_p, complete sequence	169700-169729	7	0.767
NZ_CP014623_2	2.21\|845818\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845818-845847	30	NZ_CP022429	Pantoea ananatis strain YJ76 plasmid p_unamed1	14585-14614	7	0.767
NZ_CP014623_2	2.25\|846082\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846082-846111	30	NC_018265	Melissococcus plutonius DAT561 plasmid 1, complete sequence	27087-27116	7	0.767
NZ_CP014623_2	2.32\|846543\|29\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846543-846571	29	AP017903	Azobacteroides phage ProJPt-Bp1 DNA, complete sequence	14231-14259	7	0.759
NZ_CP014623_2	2.32\|846543\|29\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846543-846571	29	NZ_CP009619	Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence	83375-83403	7	0.759
NZ_CP014623_2	2.32\|846543\|29\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846543-846571	29	NZ_CP009640	Bacillus cereus 03BB108 plasmid pBFI_3, complete sequence	17744-17772	7	0.759
NZ_CP014623_2	2.32\|846543\|29\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	846543-846571	29	NZ_CP053961	Bacillus cereus strain FDAARGOS_802 plasmid unnamed1, complete sequence	51577-51605	7	0.759
NZ_CP014623_2	2.4\|844696\|30\|NZ_CP014623\|CRISPRCasFinder,CRT	844696-844725	30	NZ_CP015623	Corynebacterium crudilactis strain JZ16 plasmid pCRULAC1, complete sequence	53592-53621	8	0.733
NZ_CP014623_2	2.17\|845554\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845554-845583	30	MK448986	Streptococcus phage Javan570, complete genome	7337-7366	8	0.733
NZ_CP014623_2	2.17\|845554\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845554-845583	30	MK448740	Streptococcus phage Javan367, complete genome	28230-28259	8	0.733
NZ_CP014623_2	2.17\|845554\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845554-845583	30	MF417940	Uncultured Caudovirales phage clone 3S_8, partial genome	13779-13808	8	0.733
NZ_CP014623_2	2.17\|845554\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845554-845583	30	KX077891	Streptococcus phage phiJH1301-1, complete genome	11567-11596	8	0.733
NZ_CP014623_2	2.20\|845752\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845752-845781	30	HQ698922	Acinetobacter phage ZZ1, complete genome	106480-106509	8	0.733
NZ_CP014623_2	2.20\|845752\|30\|NZ_CP014623\|CRISPRCasFinder,CRT,PILER-CR	845752-845781	30	MK240351	Acinetobacter phage Henu6, complete genome	165774-165803	8	0.733

1. spacer 1.1|779008|46|NZ_CP014623|CRISPRCasFinder matches to NZ_LT907987 (Lactobacillus sakei strain T332 plasmid p332A2, complete sequence) position: , mismatch: 0, identity: 1.0

ccagaaagctgcttaaagtttcgtccaatatttggggttcacttca	CRISPR spacer
ccagaaagctgcttaaagtttcgtccaatatttggggttcacttca	Protospacer
**********************************************

2. spacer 1.1|779008|46|NZ_CP014623|CRISPRCasFinder matches to NZ_CP026117 (Lactobacillus curvatus JCM 1096 = DSM 20019 plasmid pLDW-27, complete sequence) position: , mismatch: 0, identity: 1.0

ccagaaagctgcttaaagtttcgtccaatatttggggttcacttca	CRISPR spacer
ccagaaagctgcttaaagtttcgtccaatatttggggttcacttca	Protospacer
**********************************************

3. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

4. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

5. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017974 (Lactobacillus fermentum strain MTCC 25067 plasmid pLF25067) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

6. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042373 (Lactobacillus malefermentans strain CBA3618 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

7. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053341 (Lactobacillus paraplantarum strain CK401 plasmid pCK401D, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

8. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_017018 (Pediococcus claussenii ATCC BAA-344 plasmid pPECL-7, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

9. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012281 (Pediococcus damnosus strain TMW 2.1533 plasmid pL21533-6, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

10. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042385 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

11. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014921 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-6, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

12. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035024 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

13. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035024 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pD) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

14. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016492 (Lactobacillus pentosus strain BGM48 plasmid pBGM48-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

15. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_018699 (Leuconostoc carnosum JB16 plasmid pKLC4, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

16. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018407 (Lactobacillus plantarum strain SN35N plasmid pSN35N-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

17. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018409 (Lactobacillus plantarum strain SN35N plasmid pSN35N-4, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

18. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020733 (Leuconostoc mesenteroides subsp. mesenteroides FM06 plasmid pLm2, complete genome) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

19. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014901 (Lactobacillus backii strain TMW 1.2002 plasmid pL12002-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

20. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013153 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

21. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_022123 (Lactobacillus paracasei subsp. paracasei 8700:2 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

22. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_021234 (Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp4, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

23. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042386 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

24. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014930 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-6, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

25. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029547 (Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

26. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014875 (Lactobacillus backii strain TMW 1.1989 plasmid pL11989-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

27. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014627 (Lactobacillus backii strain TMW 1.1988 plasmid L11988-3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

28. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018765 (Pediococcus acidilactici strain BCC1 plasmid pbcp2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

29. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_016821 (Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE03, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

30. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035748 (Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

31. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035750 (Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

32. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014603 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

33. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014603 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

34. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028237 (Lactobacillus plantarum strain SRCM101511 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggggtcgcaattccttcaa	Protospacer
******************************

35. spacer 1.1|779008|46|NZ_CP014623|CRISPRCasFinder matches to NZ_LT907987 (Lactobacillus sakei strain T332 plasmid p332A2, complete sequence) position: , mismatch: 1, identity: 0.978

ccagaaagctgcttaaagtttcgtccaatatttggggttcacttca	CRISPR spacer
ccagaaagctacttaaagtttcgtccaatatttggggttcacttca	Protospacer
**********.***********************************

36. spacer 1.1|779008|46|NZ_CP014623|CRISPRCasFinder matches to NZ_CP042372 (Lactobacillus malefermentans strain CBA3618 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.978

ccagaaagctgcttaaagtttcgtccaatatttggggttcacttca	CRISPR spacer
ccagaaagttgcttaaagtttcgtccaatatttggggttcacttca	Protospacer
********.*************************************

37. spacer 1.1|779008|46|NZ_CP014623|CRISPRCasFinder matches to NC_003320 (Lactobacillus curvatus strain CRL705 plasmid pRC18, complete sequence) position: , mismatch: 1, identity: 0.978

ccagaaagctgcttaaagtttcgtccaatatttggggttcacttca	CRISPR spacer
ctagaaagctgcttaaagtttcgtccaatatttggggttcacttca	Protospacer
*.********************************************

38. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047122 (Lactobacillus hilgardii strain FLUB plasmid unnamed1) position: , mismatch: 1, identity: 0.967

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
ttgtaaaaaatggagtcgcaattccttcaa	Protospacer
*************.****************

39. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014896 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-6, complete sequence) position: , mismatch: 1, identity: 0.967

ttgtaaaaaat-ggggtcgcaattccttcaa	CRISPR spacer
-tgtaaaaaatgggggtcgcaattccttcaa	Protospacer
 ********** *******************

40. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019983 (Pediococcus inopinatus strain DSM 20285 plasmid pLDW-13, complete sequence) position: , mismatch: 1, identity: 0.967

ttgtaaaaaat-ggggtcgcaattccttcaa	CRISPR spacer
-tgtaaaaaatgggggtcgcaattccttcaa	Protospacer
 ********** *******************

41. spacer 2.5|844762|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_008502 (Lactobacillus paracasei ATCC 334 plasmid 1, complete sequence) position: , mismatch: 3, identity: 0.9

ttgtaaaaaatggggtcgcaattccttcaa	CRISPR spacer
tgtaaaaaaatggggtcgcaattccttcaa	Protospacer
*   **************************

42. spacer 2.14|845356|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to AP018361 (Lactobacillus phage T25 DNA, complete genome) position: , mismatch: 5, identity: 0.833

gatcggacgcactttgtctattatggattt	CRISPR spacer
gaccgtttacactttgtctattatggattt	Protospacer
**.**  ..*********************

43. spacer 2.25|846082|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 5, identity: 0.833

tactgaactagttaatcaatataataaaaa	CRISPR spacer
agttgaactagttaaacaatataatgaaaa	Protospacer
 ..************ *********.****

44. spacer 2.25|846082|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047445 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-8) position: , mismatch: 5, identity: 0.833

tactgaactagttaatcaatataataaaaa	CRISPR spacer
agttgaactagttaaacaatataatgaaaa	Protospacer
 ..************ *********.****

45. spacer 2.25|846082|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to MN694732 (Marine virus AFVG_250M550, complete genome) position: , mismatch: 6, identity: 0.8

tactgaactagttaatcaatataataaaaa	CRISPR spacer
taaagcactacttaatcaaaataataaaag	Protospacer
**  * **** ******** *********.

46. spacer 2.33|846608|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to CP054320 (Escherichia coli strain SCU-390 plasmid pSCU-390-2, complete sequence) position: , mismatch: 6, identity: 0.8

tgaccgtgtgtgttatttcttcgtcaattt	CRISPR spacer
aaaccgggtgtgttttttcttcgtcaaaat	Protospacer
 .**** ******* ************  *

47. spacer 2.3|844630|30|NZ_CP014623|CRISPRCasFinder,CRT matches to NZ_CP031178 (Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_D, complete sequence) position: , mismatch: 7, identity: 0.767

tgcttatgcttgtgtagaatattaatgtgc	CRISPR spacer
agcttatgcttgtgtagaagattcttggtt	Protospacer
 ****************** ***  **  .

48. spacer 2.3|844630|30|NZ_CP014623|CRISPRCasFinder,CRT matches to MH675552 (Bacteroides phage crAss001, complete genome) position: , mismatch: 7, identity: 0.767

tgcttatgcttgtgtagaatattaatgtgc	CRISPR spacer
tgcttatgcttatgtagaatataaggaagg	Protospacer
***********.********** *. . *

49. spacer 2.3|844630|30|NZ_CP014623|CRISPRCasFinder,CRT matches to MT774388 (CrAssphage cr112_1, complete genome) position: , mismatch: 7, identity: 0.767

tgcttatgcttgtgtagaatattaatgtgc	CRISPR spacer
tgcttatgcttatgtagaatataaggaagg	Protospacer
***********.********** *. . *

50. spacer 2.19|845686|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039853 (Salinimonas sp. KX18D6 plasmid plas12, complete sequence) position: , mismatch: 7, identity: 0.767

caatagcagaaaagtatgagcgatgtggga	CRISPR spacer
ttataggagaaaagtatgagcgatttagat	Protospacer
. **** ***************** *.*.

51. spacer 2.19|845686|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_015498 (Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01, complete sequence) position: , mismatch: 7, identity: 0.767

caatagcagaaaagtatgagcgatgtggga	CRISPR spacer
ttataggagaaaagtatgagcgatttagat	Protospacer
. **** ***************** *.*.

52. spacer 2.21|845818|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014208 (Pantoea ananatis strain R100 plasmid, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcaatcagcatggtaacgtcatcaatt	CRISPR spacer
gggtgtatctgcacggtaacgtcatcaatc	Protospacer
 * *  *** ***.***************.

53. spacer 2.21|845818|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035036 (Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcaatcagcatggtaacgtcatcaatt	CRISPR spacer
gggtgtatctgcacggtaacgtcatcaatc	Protospacer
 * *  *** ***.***************.

54. spacer 2.21|845818|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_017553 (Pantoea ananatis PA13 plasmid PAGR_p, complete sequence) position: , mismatch: 7, identity: 0.767

tgttcaatcagcatggtaacgtcatcaatt	CRISPR spacer
gggtgtatctgcacggtaacgtcatcaatc	Protospacer
 * *  *** ***.***************.

55. spacer 2.21|845818|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022429 (Pantoea ananatis strain YJ76 plasmid p_unamed1) position: , mismatch: 7, identity: 0.767

tgttcaatcagcatggtaacgtcatcaatt	CRISPR spacer
gggtgtatctgcacggtaacgtcatcaatc	Protospacer
 * *  *** ***.***************.

56. spacer 2.25|846082|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NC_018265 (Melissococcus plutonius DAT561 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

tactgaactagttaatcaatataataaaaa	CRISPR spacer
ctccgaacaagttaattaatataataatac	Protospacer
. *.**** *******.********** *

57. spacer 2.32|846543|29|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to AP017903 (Azobacteroides phage ProJPt-Bp1 DNA, complete sequence) position: , mismatch: 7, identity: 0.759

caaaagcaatgatgaaccttatatttata	CRISPR spacer
acctagcaatgattatccttatatttatt	Protospacer
    ********* * ************

58. spacer 2.32|846543|29|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009619 (Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence) position: , mismatch: 7, identity: 0.759

caaaagcaatgatgaaccttatatttata	CRISPR spacer
cttgagcaatgtagaaccttatatttagt	Protospacer
*  .*******  **************

59. spacer 2.32|846543|29|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009640 (Bacillus cereus 03BB108 plasmid pBFI_3, complete sequence) position: , mismatch: 7, identity: 0.759

caaaagcaatgatgaaccttatatttata	CRISPR spacer
tggaaatgatgatgaaccttatattaata	Protospacer
...**...***************** ***

60. spacer 2.32|846543|29|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053961 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

caaaagcaatgatgaaccttatatttata	CRISPR spacer
tggaaatgatgatgaaccttatattaata	Protospacer
...**...***************** ***

61. spacer 2.4|844696|30|NZ_CP014623|CRISPRCasFinder,CRT matches to NZ_CP015623 (Corynebacterium crudilactis strain JZ16 plasmid pCRULAC1, complete sequence) position: , mismatch: 8, identity: 0.733

ccaagcaccctttttttatcccaaccatac	CRISPR spacer
acccacccccttttttcatcccaaccattt	Protospacer
 *  .* *********.*********** .

62. spacer 2.17|845554|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to MK448986 (Streptococcus phage Javan570, complete genome) position: , mismatch: 8, identity: 0.733

attatacgttgaaaaatacaataagcagat	CRISPR spacer
tggatacgttgaaaaatacaagaactacac	Protospacer
   ****************** ** .* *.

63. spacer 2.17|845554|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to MK448740 (Streptococcus phage Javan367, complete genome) position: , mismatch: 8, identity: 0.733

attatacgttgaaaaatacaataagcagat	CRISPR spacer
aaacggtgttgaaaaatacaacaagaagat	Protospacer
*    ..**************.*** ****

64. spacer 2.17|845554|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to MF417940 (Uncultured Caudovirales phage clone 3S_8, partial genome) position: , mismatch: 8, identity: 0.733

attatacgttgaaaaatacaataagcagat	CRISPR spacer
aaacggtgttgaaaaatacaacaagaagat	Protospacer
*    ..**************.*** ****

65. spacer 2.17|845554|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to KX077891 (Streptococcus phage phiJH1301-1, complete genome) position: , mismatch: 8, identity: 0.733

attatacgttgaaaaatacaataagcagat	CRISPR spacer
tggatacgttgaaaaatacaagaactatac	Protospacer
   ****************** ** .* *.

66. spacer 2.20|845752|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to HQ698922 (Acinetobacter phage ZZ1, complete genome) position: , mismatch: 8, identity: 0.733

ttaattacgcggttaagcaaaagatcttag	CRISPR spacer
gtaattacgcgtttaagtaaaagattactt	Protospacer
 ********** *****.*******. .

67. spacer 2.20|845752|30|NZ_CP014623|CRISPRCasFinder,CRT,PILER-CR matches to MK240351 (Acinetobacter phage Henu6, complete genome) position: , mismatch: 8, identity: 0.733

ttaattacgcggttaagcaaaagatcttag	CRISPR spacer
gtaattacgcgtttaagtaaaagattactt	Protospacer
 ********** *****.*******. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

11142 : 71229

Streptococcus_phage(21.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057808145.1\|11142_12390_+\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	5.3e-09	24.7
WP_143452797.1\|12446_12668_+	hypothetical protein	NA	NA	NA	NA
WP_068222080.1\|12826_13606_+	hypothetical protein	NA	NA	NA	NA
WP_068222083.1\|13718_14906_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_082918563.1\|15062_15449_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_068222089.1\|15673_17086_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_156519978.1\|17656_17809_+	hypothetical protein	NA	NA	NA	NA
WP_068222092.1\|17878_18925_-	DMT family transporter	NA	NA	NA	NA
WP_068222100.1\|19112_20396_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.3e-46	32.4
WP_068222103.1\|20867_21665_+	hypothetical protein	NA	NA	NA	NA
WP_068376540.1\|21816_22746_+	AEC family transporter	NA	NA	NA	NA
WP_068222111.1\|23291_25799_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	9.7e-135	32.6
WP_068222115.1\|26084_26408_+	hypothetical protein	NA	NA	NA	NA
WP_068222118.1\|26628_27102_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_068222121.1\|27098_27362_-	hypothetical protein	NA	NA	NA	NA
WP_068222124.1\|27841_28387_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_068222127.1\|28448_28880_+	hypothetical protein	NA	NA	NA	NA
WP_068222131.1\|28881_29691_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_068222134.1\|29895_31455_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068222139.1\|31598_33518_-	fructose-bisphosphatase class III	NA	NA	NA	NA
WP_068226171.1\|34570_36043_+	anthranilate synthase component I family protein	NA	NA	NA	NA
WP_068222142.1\|36026_36611_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.7e-40	45.9
WP_156520071.1\|36669_36831_+	hypothetical protein	NA	NA	NA	NA
WP_068222145.1\|37527_38547_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	6.2e-64	38.6
WP_068222148.1\|38543_39332_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.0e-37	42.5
WP_068222150.1\|39328_39916_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_068222154.1\|41123_41909_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_068222157.1\|42042_42636_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	1.3e-26	33.2
WP_068222160.1\|42997_43522_-	hypothetical protein	NA	NA	NA	NA
WP_068222163.1\|43968_45090_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	2.5e-13	24.3
WP_068222166.1\|45168_45495_+	hypothetical protein	NA	NA	NA	NA
WP_068222171.1\|45711_46176_-	hypothetical protein	NA	NA	NA	NA
WP_068222179.1\|46443_47616_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_068222182.1\|48001_48655_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_068222186.1\|48671_49016_+	hypothetical protein	NA	NA	NA	NA
WP_082918564.1\|49247_49769_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_068222192.1\|50084_50795_+	response regulator transcription factor	W8CYM9	Bacillus_phage	6.9e-30	33.8
WP_068222195.1\|50769_52176_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	6.6e-16	28.9
WP_068222197.1\|52326_53205_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_068222200.1\|53331_53478_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA
WP_068222202.1\|53508_55020_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9KZV5	Tupanvirus	1.3e-41	27.5
WP_068222205.1\|55012_56230_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	A0A125RNP0	Pseudomonas_phage	3.7e-23	27.9
WP_068222209.1\|56256_56490_+	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA
WP_068222212.1\|56486_57743_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_068222215.1\|57758_58940_+	serine hydrolase	G1DB24	Mycobacterium_phage	3.4e-05	21.9
WP_100077741.1\|59057_60230_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_068222221.1\|60232_61096_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_068222179.1\|61298_62471_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_068222224.1\|62779_63433_-	VTT domain-containing protein	NA	NA	NA	NA
WP_156519980.1\|64156_64552_+	hypothetical protein	NA	NA	NA	NA
WP_068222229.1\|64766_65714_+	SAP domain-containing protein	NA	NA	NA	NA
WP_068222231.1\|65874_66207_+	hypothetical protein	NA	NA	NA	NA
WP_068222234.1\|66465_67893_+	C69 family dipeptidase	NA	NA	NA	NA
WP_068222237.1\|68126_68345_+	hypothetical protein	NA	NA	NA	NA
WP_156519981.1\|68292_68856_+	hypothetical protein	NA	NA	NA	NA
WP_068222244.1\|69059_69293_+	hypothetical protein	NA	NA	NA	NA
WP_068222245.1\|69375_69651_-	hypothetical protein	NA	NA	NA	NA
WP_068222268.1\|70005_71229_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.6e-74	44.4

DBSCAN-SWA_2

865654 : 874639

Staphylococcus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068224117.1\|865654_866524_-	YitT family protein	M1Q1P6	Streptococcus_phage	9.3e-53	39.1
WP_068224120.1\|866642_867431_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_068224123.1\|867427_868636_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.2e-42	51.7
WP_068224126.1\|869032_870916_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.6e-55	29.7
WP_178378328.1\|870925_871879_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.5e-120	65.0
WP_068224130.1\|871891_872386_+	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	9.4e-26	37.7
WP_068224133.1\|872992_873640_-	hemolysin III family protein	NA	NA	NA	NA
WP_068224134.1\|873793_874639_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	1.5e-18	41.8

DBSCAN-SWA_3

1043494 : 1098839

Streptococcus_phage(26.67%)

integrase,transposase,tRNA

attL 1042854:1042913|attR 1080039:1082333

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1042854:1042913	attL	NA	NA	NA	NA
WP_178378324.1\|1043494_1045048_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.9e-56	30.5
WP_068224524.1\|1045537_1047316_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_068224527.1\|1047332_1048622_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_068224529.1\|1049269_1050538_+	N-acetylmuramoyl-L-alanine amidase	C8CHK8	Thermus_virus	5.8e-11	38.0
WP_068224533.1\|1050696_1051023_-	AzlD domain-containing protein	NA	NA	NA	NA
WP_068224536.1\|1051012_1051804_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_068224539.1\|1051885_1052509_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_068224542.1\|1052720_1053164_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_068224546.1\|1053403_1055641_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	S4TRQ0	Salmonella_phage	2.0e-06	42.3
WP_068224549.1\|1055744_1056089_-	hypothetical protein	NA	NA	NA	NA
WP_068224552.1\|1056457_1057204_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_068224554.1\|1057203_1058154_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_068224557.1\|1058174_1058669_-	DUF3013 family protein	NA	NA	NA	NA
WP_068224560.1\|1058665_1059295_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_068224562.1\|1059376_1059745_-	hypothetical protein	NA	NA	NA	NA
WP_082918503.1\|1059878_1061270_+	phosphoenolpyruvate carboxykinase (ATP)	NA	NA	NA	NA
WP_068224565.1\|1061365_1062649_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	5.2e-44	32.1
WP_068224569.1\|1062807_1063005_+	hypothetical protein	NA	NA	NA	NA
WP_068224572.1\|1063233_1063476_-	hypothetical protein	NA	NA	NA	NA
WP_068224575.1\|1063876_1064971_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_068224578.1\|1065128_1065740_+	hypothetical protein	NA	NA	NA	NA
WP_068224581.1\|1065869_1066739_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	7.0e-08	29.3
WP_068224584.1\|1067117_1068593_+	glucosaminidase domain-containing protein	A0A0K2CP65	Brevibacillus_phage	1.0e-11	40.8
WP_068224587.1\|1068920_1069151_+	hypothetical protein	NA	NA	NA	NA
WP_068224565.1\|1069526_1070810_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	5.2e-44	32.1
WP_075168966.1\|1071139_1071349_-	hypothetical protein	NA	NA	NA	NA
WP_068224593.1\|1071561_1072728_+\|integrase	site-specific integrase	A0A0A8WIE1	Clostridium_phage	3.1e-96	46.8
WP_068224595.1\|1072850_1074689_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	1.4e-21	24.4
WP_068224598.1\|1074853_1076020_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	6.9e-19	24.1
WP_068224602.1\|1076212_1078075_-	molecular chaperone DnaK	A0A2P1EIW2	Megavirus	2.7e-134	45.8
WP_075168967.1\|1078110_1078743_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_068224608.1\|1078761_1079805_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_068222411.1\|1080124_1080307_+	hypothetical protein	NA	NA	NA	NA
WP_068222408.1\|1080296_1080671_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_178378324.1\|1080679_1082233_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.9e-56	30.5
WP_068224613.1\|1082514_1083657_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
1080039:1082333	attR	NA	NA	NA	NA
WP_068224616.1\|1083653_1084610_-	riboflavin biosynthesis protein RibF	NA	NA	NA	NA
WP_068224620.1\|1084635_1085553_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_068224623.1\|1085742_1086099_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_068224626.1\|1086119_1088660_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.0e-22	24.0
WP_068224629.1\|1088664_1088979_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA
WP_068224632.1\|1088968_1089274_-	YlxR family protein	NA	NA	NA	NA
WP_068224635.1\|1089288_1090431_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_068224638.1\|1090451_1090925_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_068224641.1\|1091090_1095431_-	PolC-type DNA polymerase III	M1IQE0	Bacillus_phage	1.5e-26	21.6
WP_068224644.1\|1095548_1097261_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_068222268.1\|1097615_1098839_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.6e-74	44.4

DBSCAN-SWA_4

1217591 : 1297597

Lactobacillus_phage(25.0%)

portal,integrase,terminase,head,plate,transposase,capsid,tail,tRNA

attL 1277932:1277946|attR 1300867:1300881

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068226230.1\|1217591_1220255_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	1.2e-154	41.8
WP_068224895.1\|1220660_1221878_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_068224897.1\|1221899_1223048_-	cysteine desulfurase	NA	NA	NA	NA
WP_068224899.1\|1223235_1224951_-	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_068224901.1\|1225108_1225576_+	GAF domain-containing protein	NA	NA	NA	NA
WP_068224904.1\|1225791_1226403_+	30S ribosomal protein S4	NA	NA	NA	NA
WP_068224077.1\|1226627_1227911_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.1e-45	32.1
WP_068224908.1\|1228025_1228649_-	DUF1054 family protein	NA	NA	NA	NA
WP_075168938.1\|1228856_1229336_+	YueI family protein	NA	NA	NA	NA
WP_068224910.1\|1229522_1231805_-	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA
WP_068224913.1\|1231953_1233228_+	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.4e-105	49.8
WP_068224915.1\|1233569_1233845_+	hypothetical protein	NA	NA	NA	NA
WP_068224917.1\|1233920_1234418_+	universal stress protein	NA	NA	NA	NA
WP_068224920.1\|1234722_1235613_+	phosphate--nucleotide phosphotransferase	NA	NA	NA	NA
WP_082918506.1\|1235722_1236346_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_068224922.1\|1236522_1237179_-	HAD family phosphatase	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	2.4e-08	27.1
WP_068226233.1\|1237193_1238168_-	DUF2785 domain-containing protein	NA	NA	NA	NA
WP_068224924.1\|1238285_1238792_+\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_068224926.1\|1238895_1240140_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	9.1e-110	54.8
WP_068224927.1\|1240136_1240961_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.5e-44	40.7
WP_068224928.1\|1241098_1241608_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_082918508.1\|1241847_1242702_-	prephenate dehydratase	NA	NA	NA	NA
WP_068224929.1\|1242698_1243763_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_068224931.1\|1243766_1244771_-	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA
WP_068224933.1\|1244786_1245668_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_068224935.1\|1245669_1247697_-	transketolase	NA	NA	NA	NA
WP_068224937.1\|1248451_1248667_+	CsbD family protein	NA	NA	NA	NA
WP_178378324.1\|1248753_1250307_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.9e-56	30.5
WP_068222408.1\|1250315_1250690_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_068222411.1\|1250679_1250862_-	hypothetical protein	NA	NA	NA	NA
WP_156521549.1\|1251532_1251850_+	acetyl-CoA carboxylase	NA	NA	NA	NA
WP_068224943.1\|1251907_1252330_-	hypothetical protein	NA	NA	NA	NA
WP_068224945.1\|1252313_1252799_-	hypothetical protein	NA	NA	NA	NA
WP_068224948.1\|1252785_1253079_-	hypothetical protein	NA	NA	NA	NA
WP_068224950.1\|1253158_1253386_-	hypothetical protein	NA	NA	NA	NA
WP_068224952.1\|1253395_1253899_-	hypothetical protein	NA	NA	NA	NA
WP_068224953.1\|1254073_1255525_-	LysM peptidoglycan-binding domain-containing protein	Q9ZXB4	Leuconostoc_phage	1.2e-121	57.1
WP_082920228.1\|1255508_1256000_-	hypothetical protein	NA	NA	NA	NA
WP_068224956.1\|1256005_1256368_-	hypothetical protein	NA	NA	NA	NA
WP_068224958.1\|1256360_1256780_-	hypothetical protein	D6PSR9	Lactobacillus_phage	1.1e-27	45.7
WP_082920229.1\|1256817_1256958_-	XkdX family protein	NA	NA	NA	NA
WP_068224961.1\|1256960_1257287_-	hypothetical protein	NA	NA	NA	NA
WP_068224963.1\|1257295_1258297_-\|plate	BppU family phage baseplate upper protein	NA	NA	NA	NA
WP_068224965.1\|1258304_1259861_-	hypothetical protein	NA	NA	NA	NA
WP_156521540.1\|1259891_1260053_-	hypothetical protein	NA	NA	NA	NA
WP_082920230.1\|1260074_1260224_-	XkdX family protein	NA	NA	NA	NA
WP_068224967.1\|1260225_1260606_-	hypothetical protein	NA	NA	NA	NA
WP_068224970.1\|1260767_1261220_-	hypothetical protein	NA	NA	NA	NA
WP_068224972.1\|1261342_1261930_-	collagen-like protein	NA	NA	NA	NA
WP_068224974.1\|1261880_1263026_-\|tail	phage tail protein	NA	NA	NA	NA
WP_068224977.1\|1263037_1263961_-\|tail	phage tail family protein	M4ZS20	Bacillus_phage	5.7e-16	26.5
WP_068224980.1\|1263975_1268664_-	tape measure protein	B8R657	Lactobacillus_phage	2.0e-48	33.4
WP_156521541.1\|1268663_1268930_-	hypothetical protein	NA	NA	NA	NA
WP_068224985.1\|1269004_1269526_-	hypothetical protein	NA	NA	NA	NA
WP_068224988.1\|1269614_1270376_-	hypothetical protein	NA	NA	NA	NA
WP_068224990.1\|1270382_1270805_-	hypothetical protein	NA	NA	NA	NA
WP_068224992.1\|1270801_1271299_-	hypothetical protein	NA	NA	NA	NA
WP_068224994.1\|1271291_1271618_-	hypothetical protein	NA	NA	NA	NA
WP_068224996.1\|1271628_1272006_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_068224998.1\|1272006_1272267_-	Ig-like domain-containing protein	NA	NA	NA	NA
WP_068224999.1\|1272338_1273496_-\|capsid	major capsid protein	A0A0K2CP76	Brevibacillus_phage	4.5e-63	38.2
WP_068225001.1\|1273515_1273881_-	hypothetical protein	A0A0K2CNR0	Brevibacillus_phage	3.2e-15	38.8
WP_068225003.1\|1273899_1274556_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_068225005.1\|1274656_1275646_-\|capsid	minor capsid protein	NA	NA	NA	NA
WP_068225007.1\|1275632_1277321_-\|portal	phage portal protein	D2IYW2	Enterococcus_phage	1.2e-75	35.0
WP_068225009.1\|1277320_1277566_-	hypothetical protein	NA	NA	NA	NA
WP_068225011.1\|1277577_1279035_-\|terminase	phage terminase large subunit	A0A090EUA8	Clostridium_phage	6.8e-157	59.3
1277932:1277946	attL	NA	NA	NA	NA
WP_068225013.1\|1279027_1279615_-	hypothetical protein	A0A1S5SAA7	Streptococcus_phage	1.1e-62	64.7
WP_068225015.1\|1280565_1281021_-	hypothetical protein	A0A1B0YC57	Lactobacillus_phage	7.6e-22	39.3
WP_068225017.1\|1281104_1281335_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068225019.1\|1281348_1282386_-\|integrase	site-specific integrase	U5JA40	Bacillus_phage	1.1e-60	39.0
WP_068225022.1\|1282465_1282939_+	hypothetical protein	NA	NA	NA	NA
WP_068225024.1\|1283073_1283304_-	hypothetical protein	NA	NA	NA	NA
WP_068225026.1\|1283342_1283690_-	DUF1642 domain-containing protein	Q8LTB5	Lactobacillus_phage	2.3e-23	51.6
WP_068225028.1\|1283686_1283890_-	hypothetical protein	Q5GQT7	Synechococcus_phage	4.7e-08	46.0
WP_068225030.1\|1283882_1284209_-	hypothetical protein	NA	NA	NA	NA
WP_068225032.1\|1284211_1284466_-	hypothetical protein	NA	NA	NA	NA
WP_068225034.1\|1284455_1285025_-	DUF1642 domain-containing protein	C1KFT3	Lactobacillus_virus	2.8e-50	59.2
WP_068225036.1\|1285021_1285723_-	N-6 DNA methylase	A8YQM7	Lactobacillus_phage	9.3e-120	92.6
WP_156521542.1\|1286201_1286360_-	hypothetical protein	NA	NA	NA	NA
WP_068225039.1\|1286372_1286942_-	hypothetical protein	NA	NA	NA	NA
WP_068225040.1\|1286960_1287407_-	single-stranded DNA-binding protein	A0A2D1GPB7	Lactobacillus_phage	4.8e-37	62.7
WP_068225044.1\|1287399_1287645_-	hypothetical protein	NA	NA	NA	NA
WP_068225046.1\|1287646_1287973_-	VRR-NUC domain-containing protein	A8ATF4	Listeria_phage	6.6e-12	40.6
WP_068225048.1\|1287959_1288337_-	hypothetical protein	NA	NA	NA	NA
WP_068225050.1\|1288350_1289628_-	DnaB-like helicase C-terminal domain-containing protein	A0A1P8VVQ6	Streptococcus_phage	3.0e-23	33.1
WP_068225051.1\|1289624_1290503_-	helix-turn-helix domain-containing protein	F8J194	Lactobacillus_virus	5.0e-30	61.3
WP_068225054.1\|1290489_1291161_-	hypothetical protein	U5U4M2	Lactobacillus_phage	1.4e-85	67.8
WP_068225056.1\|1291160_1291856_-	ERF family protein	A0A2H4J7J4	uncultured_Caudovirales_phage	8.6e-25	42.6
WP_068225058.1\|1291848_1292160_-	hypothetical protein	NA	NA	NA	NA
WP_068225060.1\|1292171_1292714_-	host-nuclease inhibitor Gam family protein	NA	NA	NA	NA
WP_068225062.1\|1292812_1292992_-	hypothetical protein	NA	NA	NA	NA
WP_068225063.1\|1292997_1293285_-	hypothetical protein	NA	NA	NA	NA
WP_082920234.1\|1293285_1293546_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068225064.1\|1293685_1294348_+	helix-turn-helix domain-containing protein	E5DV74	Deep-sea_thermophilic_phage	9.4e-21	35.0
WP_068226236.1\|1294659_1294902_+	hypothetical protein	E9LUL0	Lactobacillus_phage	1.1e-16	65.0
WP_068225067.1\|1294967_1295675_+	hypothetical protein	NA	NA	NA	NA
WP_068226237.1\|1296197_1296383_+	hypothetical protein	Q6SEG3	Lactobacillus_prophage	4.2e-11	63.0
WP_068225069.1\|1296454_1297597_+\|integrase	site-specific integrase	S5MBZ0	Brevibacillus_phage	4.8e-73	42.0
1300867:1300881	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1452525 : 1557972

113

Lactobacillus_phage(58.7%)

portal,integrase,terminase,head,plate,transposase,capsid,tail,protease,holin,tRNA

attL 1481085:1481108|attR 1565170:1565193

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057808145.1\|1452525_1453773_+\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	5.3e-09	24.7
WP_068225306.1\|1453973_1454921_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.2e-82	49.7
WP_068225307.1\|1454996_1455404_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_068225308.1\|1455618_1456635_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_068225309.1\|1456662_1457487_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_082918513.1\|1457486_1458527_-	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_068225310.1\|1458809_1459160_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_082918514.1\|1459159_1459453_-	hypothetical protein	NA	NA	NA	NA
WP_068225311.1\|1459452_1459698_-	PspC domain-containing protein	NA	NA	NA	NA
WP_068225312.1\|1459723_1461202_-	daptomycin-sensing surface protein LiaX	NA	NA	NA	NA
WP_068225313.1\|1461388_1462063_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_068225314.1\|1462163_1462919_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-19	30.8
WP_068225315.1\|1462962_1463772_-	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.4e-12	31.8
WP_068225316.1\|1463774_1464662_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_068225317.1\|1464658_1465582_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_068225318.1\|1465583_1466444_-	phosphate ABC transporter substrate-binding protein PstS family protein	NA	NA	NA	NA
WP_068225319.1\|1466776_1468444_-	sensor histidine kinase	W8CYF6	Bacillus_phage	7.8e-32	35.3
WP_068225320.1\|1468430_1469129_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-37	35.4
WP_068225321.1\|1469130_1470240_-	hypothetical protein	NA	NA	NA	NA
WP_178378318.1\|1470501_1471618_-	peptide chain release factor 2	NA	NA	NA	NA
WP_068225323.1\|1471766_1474130_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_068225324.1\|1474309_1474873_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_068225325.1\|1475050_1475737_-	ComF family protein	NA	NA	NA	NA
WP_068225326.1\|1475736_1477056_-	DEAD/DEAH box helicase family protein	A0A1X9I5S6	Streptococcus_phage	7.7e-75	39.2
WP_068225327.1\|1477103_1477742_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	2.2e-43	44.7
WP_068225328.1\|1477847_1478921_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_068225329.1\|1479322_1480885_-	ribonuclease Y	NA	NA	NA	NA
1481085:1481108	attL	NA	NA	NA	NA
WP_068225330.1\|1481184_1482354_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	5.7e-122	65.6
WP_068225331.1\|1482458_1483706_-	competence/damage-inducible protein A	NA	NA	NA	NA
WP_068225332.1\|1484035_1484623_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_068225333.1\|1484791_1485796_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068225334.1\|1485881_1486610_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_068225335.1\|1486613_1487912_-	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	8.0e-08	27.3
WP_068225336.1\|1487911_1489183_-	insulinase family protein	NA	NA	NA	NA
WP_068225337.1\|1489264_1491658_-	DNA translocase FtsK	Q853W3	Mycobacterium_phage	9.1e-82	45.9
WP_068225338.1\|1491975_1492377_-	DUF1149 family protein	NA	NA	NA	NA
WP_068225339.1\|1492394_1494458_-	DNA topoisomerase 3	NA	NA	NA	NA
WP_068225340.1\|1494480_1494990_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_068225341.1\|1495233_1495656_-	hypothetical protein	NA	NA	NA	NA
WP_068224945.1\|1495639_1496125_-	hypothetical protein	NA	NA	NA	NA
WP_068225342.1\|1496111_1496405_-	hypothetical protein	NA	NA	NA	NA
WP_068224950.1\|1496484_1496712_-	hypothetical protein	NA	NA	NA	NA
WP_068224952.1\|1496721_1497225_-	hypothetical protein	NA	NA	NA	NA
WP_068225343.1\|1497399_1498851_-	LysM peptidoglycan-binding domain-containing protein	Q9ZXB4	Leuconostoc_phage	1.4e-122	57.4
WP_082920235.1\|1498834_1499326_-	hypothetical protein	NA	NA	NA	NA
WP_068224956.1\|1499331_1499694_-	hypothetical protein	NA	NA	NA	NA
WP_068225344.1\|1499686_1500106_-	hypothetical protein	D6PSR9	Lactobacillus_phage	1.1e-27	46.5
WP_082920236.1\|1500145_1500286_-	XkdX family protein	NA	NA	NA	NA
WP_068225345.1\|1500288_1500615_-	hypothetical protein	NA	NA	NA	NA
WP_068225346.1\|1500623_1501628_-\|plate	BppU family phage baseplate upper protein	NA	NA	NA	NA
WP_068225347.1\|1501635_1503192_-	hypothetical protein	NA	NA	NA	NA
WP_068225348.1\|1503303_1505337_-	hypothetical protein	G4U401	Lactobacillus_phage	1.8e-293	83.8
WP_068225349.1\|1505326_1506367_-\|tail	phage tail protein	A0A0M7RDS2	Lactobacillus_phage	2.6e-78	47.4
WP_068225350.1\|1506437_1507277_-\|tail	phage tail family protein	A0A0M7RF73	Lactobacillus_phage	6.5e-43	35.6
WP_068225351.1\|1507290_1512276_-\|tail	phage tail tape measure protein	E9LUR1	Lactobacillus_phage	1.1e-100	37.7
WP_143452801.1\|1512291_1512471_-	hypothetical protein	E9LUR0	Lactobacillus_phage	1.9e-16	69.5
WP_068225352.1\|1512479_1512878_-	hypothetical protein	NA	NA	NA	NA
WP_068225353.1\|1513046_1513688_-\|tail	phage tail protein	E9LUQ8	Lactobacillus_phage	7.5e-84	74.4
WP_068225354.1\|1513688_1514069_-	DUF806 family protein	E9LUQ7	Lactobacillus_phage	7.2e-34	54.3
WP_068225355.1\|1514068_1514503_-\|tail	phage tail protein	E9LUQ6	Lactobacillus_phage	9.7e-35	55.9
WP_068225356.1\|1514495_1514855_-\|head	phage head closure protein	E9LUQ5	Lactobacillus_phage	1.8e-34	55.5
WP_068225357.1\|1514838_1515195_-\|head,tail	phage gp6-like head-tail connector protein	E9LUQ4	Lactobacillus_phage	7.5e-25	59.5
WP_068225358.1\|1515207_1515402_-	hypothetical protein	NA	NA	NA	NA
WP_068225359.1\|1515446_1516679_-\|capsid	phage major capsid protein	E9LUQ3	Lactobacillus_phage	4.0e-142	64.9
WP_068225360.1\|1516678_1517458_-\|protease	Clp protease ClpP	E9LUQ2	Lactobacillus_phage	1.5e-57	54.6
WP_068225361.1\|1517423_1518629_-\|portal	phage portal protein	E9LUQ1	Lactobacillus_phage	5.0e-129	58.5
WP_191981158.1\|1518628_1518844_-	DUF1056 family protein	NA	NA	NA	NA
WP_068225363.1\|1518824_1520732_-\|terminase	terminase large subunit	E9LUP9	Lactobacillus_phage	4.4e-281	72.9
WP_068225364.1\|1520721_1521183_-\|terminase	phage terminase small subunit P27 family	E9LUP8	Lactobacillus_phage	1.4e-52	66.4
WP_082920250.1\|1521381_1521849_-	HNH endonuclease	E9LUP7	Lactobacillus_phage	5.9e-70	81.8
WP_068225366.1\|1522224_1522635_-	hypothetical protein	NA	NA	NA	NA
WP_068225367.1\|1523099_1523390_-	hypothetical protein	C1KFT8	Lactobacillus_virus	1.5e-36	85.7
WP_068225368.1\|1523373_1523709_-	hypothetical protein	NA	NA	NA	NA
WP_068225369.1\|1523711_1523966_-	hypothetical protein	NA	NA	NA	NA
WP_068225370.1\|1523955_1524396_-	hypothetical protein	B4XYT4	Lactobacillus_phage	1.5e-30	55.0
WP_068225371.1\|1524392_1525094_-	N-6 DNA methylase	A8YQM7	Lactobacillus_phage	1.6e-119	93.0
WP_156521544.1\|1525572_1525731_-	hypothetical protein	NA	NA	NA	NA
WP_068225373.1\|1525743_1526280_-	hypothetical protein	NA	NA	NA	NA
WP_068225374.1\|1526287_1526614_-	VRR-NUC domain-containing protein	A0A0M7RDN7	Lactobacillus_phage	1.8e-33	67.6
WP_068225375.1\|1526610_1527030_-	hypothetical protein	NA	NA	NA	NA
WP_068226246.1\|1527303_1528530_-	helicase	A0A2P0ZLC4	Lactobacillus_phage	1.5e-141	63.9
WP_068225376.1\|1528555_1529341_-	bifunctional DNA primase/polymerase	A0A2P0ZLB0	Lactobacillus_phage	4.7e-88	61.5
WP_068225377.1\|1529406_1530012_-	hypothetical protein	A0A2P0ZLB9	Lactobacillus_phage	2.6e-54	61.9
WP_068225378.1\|1530014_1530734_-	AAA family ATPase	A0A1B0YEB5	Lactobacillus_phage	1.4e-78	62.1
WP_068225379.1\|1530730_1532107_-	DEAD/DEAH box helicase	A0A0A1ENT0	Lactobacillus_phage	1.5e-169	64.6
WP_068225380.1\|1532103_1532586_-	siphovirus Gp157 family protein	A0A1W6JP90	Staphylococcus_phage	1.7e-27	44.1
WP_156521545.1\|1532973_1533243_-	hypothetical protein	NA	NA	NA	NA
WP_068225382.1\|1533269_1534025_-	phage antirepressor KilAC domain-containing protein	A0A0A7DN31	Lactobacillus_phage	8.6e-71	62.6
WP_068225383.1\|1534070_1534295_-	helix-turn-helix transcriptional regulator	A0A2K9VBT6	Staphylococcus_phage	1.9e-10	47.8
WP_068225384.1\|1534467_1535127_+	LexA family transcriptional regulator	B4XYR6	Lactobacillus_phage	8.6e-59	52.2
WP_068225385.1\|1535211_1535475_+	hypothetical protein	NA	NA	NA	NA
WP_068225386.1\|1535497_1536133_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_068225387.1\|1536289_1537480_+\|integrase	site-specific integrase	A0A0M5M609	Bacillus_phage	6.0e-18	29.1
WP_068225388.1\|1537851_1538688_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_068225389.1\|1539817_1540795_+	GMP reductase	G3MBI2	Bacillus_virus	9.2e-142	74.8
WP_068225390.1\|1540869_1541139_+	30S ribosomal protein S14	NA	NA	NA	NA
WP_068225391.1\|1541202_1542360_-	AI-2E family transporter	NA	NA	NA	NA
WP_068225392.1\|1542683_1543061_-	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
WP_068225393.1\|1543254_1544292_+	lactonase family protein	NA	NA	NA	NA
WP_068225394.1\|1544303_1544948_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_068225395.1\|1545067_1546441_-	magnesium transporter	NA	NA	NA	NA
WP_068225396.1\|1546502_1547405_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_068225397.1\|1547401_1548211_-	NAD kinase	NA	NA	NA	NA
WP_068225398.1\|1548219_1548909_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_068225399.1\|1549052_1549670_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_068225400.1\|1549778_1550411_+	DsbA family protein	NA	NA	NA	NA
WP_068225401.1\|1550638_1551736_-	hypothetical protein	NA	NA	NA	NA
WP_068224077.1\|1551962_1553246_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.1e-45	32.1
WP_068225402.1\|1553393_1554086_-	adaptor protein MecA	NA	NA	NA	NA
WP_068225403.1\|1554560_1554959_-	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
WP_068225404.1\|1555140_1555881_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_068225405.1\|1556038_1556545_+	monooxygenase	NA	NA	NA	NA
WP_068222488.1\|1556793_1557972_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.1e-27	29.9
1565170:1565193	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2460623 : 2470694

Bacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068226108.1\|2460623_2461562_-	cation transporter	A0A1V0SED0	Indivirus	2.9e-15	23.6
WP_068222197.1\|2462045_2462924_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_068226109.1\|2462980_2463742_+	DUF475 domain-containing protein	A0A068EP98	Bacillus_phage	5.9e-43	44.8
WP_068226110.1\|2464048_2466757_+	HAD-IC family P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	1.4e-67	28.8
WP_068226111.1\|2467048_2467804_+	nicotinamide mononucleotide transporter	A0A2H4PB74	Lactobacillus_phage	3.0e-92	71.1
WP_068226112.1\|2468103_2469186_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	9.1e-106	57.2
WP_068224077.1\|2469410_2470694_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.1e-45	32.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage