CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP014669	Escherichia coli strain ECONIH2 plasmid pKpQIL-571, complete sequence	0 crisprs	NA	0	2
NZ_CP014667	Escherichia coli strain ECONIH2 chromosome, complete genome	6 crisprs	cas14j,DinG,cas3,DEDDh,csa3,RT,PD-DExK,WYL	5	6
NZ_CP014668	Escherichia coli strain ECONIH2 plasmid pECO-bc6, complete sequence	0 crisprs	RT	0	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10758 : 43072

Salmonella_phage(27.27%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152392.1\|10758_13788_+\|transposase	Tn3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004199214.1\|13894_14920_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|14916_15696_+	IS21-like element ISKpn7 family helper ATPase IstB	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004152396.1\|15983_16865_+	carbapenem-hydrolyzing class A beta-lactamase KPC-3	A0A1B0VBP7	Salmonella_phage	2.8e-73	52.2
WP_004152397.1\|17114_18434_-\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_004152398.1\|18710_19895_-\|transposase	ISAs1-like element ISKpn31 family transposase	NA	NA	NA	NA
WP_004152400.1\|20398_20758_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.6e-19	62.0
WP_004152401.1\|21414_21825_-	hypothetical protein	NA	NA	NA	NA
WP_004152402.1\|21923_22544_-	recombinase family protein	A0A219Y912	Aeromonas_phage	2.0e-09	31.5
WP_023307208.1\|22632_25530_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	5.5e-182	37.8
WP_000509966.1\|25624_26230_+	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_004194048.1\|26889_28071_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.9e-120	64.2
WP_000091613.1\|28497_28812_-	hypothetical protein	NA	NA	NA	NA
WP_000215515.1\|29066_29423_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001293886.1\|29412_29814_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001247892.1\|29810_30101_-	nucleotidyltransferase	NA	NA	NA	NA
WP_003100881.1\|30175_33142_+\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.2
WP_000427623.1\|33220_34225_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_004197809.1\|34406_34610_-	hypothetical protein	NA	NA	NA	NA
WP_004197808.1\|34623_34827_-	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_004197807.1\|34860_35229_-	hypothetical protein	NA	NA	NA	NA
WP_020805591.1\|35272_35767_-	hypothetical protein	NA	NA	NA	NA
WP_020805590.1\|35797_36370_-	hypothetical protein	NA	NA	NA	NA
WP_000272716.1\|36366_36615_-	hypothetical protein	NA	NA	NA	NA
WP_020315560.1\|37051_37741_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_004193995.1\|37772_38462_-	hypothetical protein	NA	NA	NA	NA
WP_001568025.1\|39016_39235_+	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_001568026.1\|39236_39542_+	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_072158608.1\|39710_40106_+	hypothetical protein	NA	NA	NA	NA
WP_022644730.1\|40132_40456_+	hypothetical protein	NA	NA	NA	NA
WP_020315256.1\|40452_41469_+	hypothetical protein	NA	NA	NA	NA
WP_019705993.1\|41803_43072_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.1e-59	34.4

DBSCAN-SWA_2

47605 : 59697

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019706038.1\|47605_49633_-	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	2.1e-26	26.6
WP_004227314.1\|49744_49960_-	hypothetical protein	NA	NA	NA	NA
WP_004152347.1\|50184_50517_-	hypothetical protein	NA	NA	NA	NA
WP_004152348.1\|50893_51868_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-105	62.3
WP_004152349.1\|51864_53070_-	AAA family ATPase	Q1MVJ3	Enterobacteria_phage	7.3e-205	89.0
WP_004152350.1\|53391_54288_-	replication initiation protein	Q71TL8	Escherichia_phage	3.3e-69	53.8
WP_004152351.1\|54688_55960_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	3.6e-154	63.7
WP_004152352.1\|55959_56391_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.0e-28	52.5
WP_004152353.1\|56622_57594_+	mediator of plasmid stability	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
WP_004152354.1\|57596_58268_+	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_001568040.1\|58328_58559_+	hypothetical protein	NA	NA	NA	NA
WP_004152355.1\|58995_59697_+	DNA methylase	A0A2I7RE86	Vibrio_phage	7.1e-27	36.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP014667

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014667_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014667_1

430169-430304

Orphan

Consensus_repeat	Method
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014667_1

>merge|NZ_CP014667|1|430169-430304|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCGGAAATCTGTAGGCCTGATAAGCGTGGCGCTTCAGGCATTGGCCACCACAGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGC

>NZ_CP014667|1|1|430169-430304|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGC	GGAAATCTGTAGGCCTGATAAGCGTGGCGCTTCAGGCATTGGCCACCACA
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014667.1\|WP_000661659.1\|430391_431342_+\|carbamate-kinase-family-protein	unknown	unknown	gnl\|CDD\|183464
NZ_CP014667.1\|WP_000662396.1\|431351_432734_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|235873
NZ_CP014667.1\|WP_000131027.1\|419863_421897_+\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NZ_CP014667.1\|WP_000052198.1\|438063_438954_+\|methylisocitrate-lyase	unknown	unknown	gnl\|CDD\|183086
NZ_CP014667.1\|WP_001298544.1\|419147_419735_-\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NZ_CP014667.1\|WP_000941081.1\|436238_437825_-\|propionate-catabolism-operon-regulatory-protein-PrpR	unknown	unknown	gnl\|CDD\|237963
NZ_CP014667.1\|WP_000116026.1\|440316_441768_+\|2-methylcitrate-dehydratase	unknown	unknown	gnl\|CDD\|181845
NZ_CP014667.1\|WP_001295808.1\|422772_423861_+\|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL	unknown	unknown	gnl\|CDD\|214491
NZ_CP014667.1\|WP_000153091.1\|425681_426287_+\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_CP014667.1\|WP_000089053.1\|417661_419134_-\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NZ_CP014667.1\|WP_000111853.1\|427179_428727_+\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP014667.1\|WP_000692732.1\|433110_434160_+\|NADPH-dependent-aldehyde-reductase-YahK	unknown	unknown	gnl\|CDD\|176186
NZ_CP014667.1\|WP_001084388.1\|423902_424835_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182237
NZ_CP014667.1\|WP_001298553.1\|426326_427190_+\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP014667.1\|WP_000083477.1\|428726_430145_+\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP014667.1\|WP_000691951.1\|435862_436138_+\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|182151
NZ_CP014667.1\|WP_001285909.1\|439113_440283_+\|2-methylcitrate-synthase	unknown	unknown	gnl\|CDD\|183463
NZ_CP014667.1\|WP_000976979.1\|435041_435716_-\|LysE-family-transporter	unknown	unknown	gnl\|CDD\|273358
NZ_CP014667.1\|WP_000010261.1\|441807_443694_+\|propionate--CoA-ligase	unknown	unknown	gnl\|CDD\|182517
NZ_CP014667.1\|WP_001013871.1\|424926_425424_-\|DUF1097-domain-containing-protein	unknown	unknown	gnl\|CDD\|368942

Protein	Function_ID	Function_description	E-value
NZ_CP014667.1\|WP_000661659.1\|430391_431342_+\|carbamate-kinase-family-protein	gnl\|CDD\|183464	PRK12352, PRK12352, putative carbamate kinase; Reviewed.	0
NZ_CP014667.1\|WP_000662396.1\|431351_432734_+\|amidohydrolase-family-protein	gnl\|CDD\|235873	PRK06846, PRK06846, putative deaminase; Validated.	0
NZ_CP014667.1\|WP_000131027.1\|419863_421897_+\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP014667.1\|WP_000052198.1\|438063_438954_+\|methylisocitrate-lyase	gnl\|CDD\|183086	PRK11320, prpB, 2-methylisocitrate lyase; Provisional.	0
NZ_CP014667.1\|WP_001298544.1\|419147_419735_-\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	3.76664e-110
NZ_CP014667.1\|WP_000941081.1\|436238_437825_-\|propionate-catabolism-operon-regulatory-protein-PrpR	gnl\|CDD\|237963	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional.	0
NZ_CP014667.1\|WP_000116026.1\|440316_441768_+\|2-methylcitrate-dehydratase	gnl\|CDD\|181845	PRK09425, prpD, bifunctional 2-methylcitrate dehydratase/aconitate hydratase.	0
NZ_CP014667.1\|WP_001295808.1\|422772_423861_+\|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL	gnl\|CDD\|214491	smart00052, EAL, Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.	9.73401e-102
NZ_CP014667.1\|WP_000153091.1\|425681_426287_+\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	1.75537e-19
NZ_CP014667.1\|WP_000089053.1\|417661_419134_-\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NZ_CP014667.1\|WP_000111853.1\|427179_428727_+\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	5.04071e-161
NZ_CP014667.1\|WP_000692732.1\|433110_434160_+\|NADPH-dependent-aldehyde-reductase-YahK	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP014667.1\|WP_001084388.1\|423902_424835_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182237	PRK10094, PRK10094, HTH-type transcriptional activator AllS.	7.71252e-82
NZ_CP014667.1\|WP_001298553.1\|426326_427190_+\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	1.6644e-35
NZ_CP014667.1\|WP_000083477.1\|428726_430145_+\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.43271e-115
NZ_CP014667.1\|WP_000691951.1\|435862_436138_+\|DUF1471-domain-containing-protein	gnl\|CDD\|182151	PRK09929, PRK09929, hypothetical protein; Provisional.	5.05349e-43
NZ_CP014667.1\|WP_001285909.1\|439113_440283_+\|2-methylcitrate-synthase	gnl\|CDD\|183463	PRK12351, PRK12351, methylcitrate synthase; Provisional.	0
NZ_CP014667.1\|WP_000976979.1\|435041_435716_-\|LysE-family-transporter	gnl\|CDD\|273358	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein. [Transport and binding proteins, Amino acids, peptides and amines].	8.68624e-75
NZ_CP014667.1\|WP_000010261.1\|441807_443694_+\|propionate--CoA-ligase	gnl\|CDD\|182517	PRK10524, prpE, propionyl-CoA synthetase; Provisional.	0
NZ_CP014667.1\|WP_001013871.1\|424926_425424_-\|DUF1097-domain-containing-protein	gnl\|CDD\|368942	pfam06496, DUF1097, Protein of unknown function (DUF1097). This family consists of several bacterial putative membrane proteins.	2.01468e-18

>NZ_CP014667.1|WP_000083477.1|428726_430145_+|DUF1116-domain-containing-protein
MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKITAANQQALERIIQSHPVLIGFDQAINVVPGMTPKTILHAGPPVTWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNVAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPMLRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAIFGWCERYGV
>NZ_CP014667.1|WP_000111853.1|427179_428727_+|acyl-CoA-synthetase-FdrA
MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQAKNGDLMIVINGKSGVDNEQLLAEIEELFNTKAQSGSHEARYATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAVARKVLERARACRKPVVACFLGRGETSVDEQGLQFARGSKEAALKAVMLSGVKQEHLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETLFAVMEKHGDVYSNIQPDPEFRLQDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA
>NZ_CP014667.1|WP_001298553.1|426326_427190_+|DUF2877-domain-containing-protein
MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFNGLFRHGDKVQFDDQGITVGQHLHIEMSHCQRWLSPTLQMTALNFHLIAWQQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIASAVASMMGLGIGLTPSADDYLTGLVLILFISGHPAEKYKEEFYRGLQRGRNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS
>NZ_CP014667.1|WP_000153091.1|425681_426287_+|ankyrin-repeat-domain-containing-protein
MTIKNLPADYLLAAQQGDIDKVKNCLALGVDINTCDRHGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLANTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
>NZ_CP014667.1|WP_001013871.1|424926_425424_-|DUF1097-domain-containing-protein
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIKSLAVNYSGMVWAFFAALAAGWLAPVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKSDGY
>NZ_CP014667.1|WP_001084388.1|423902_424835_-|LysR-family-transcriptional-regulator
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFHAIKRSIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMAQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
>NZ_CP014667.1|WP_001295808.1|422772_423861_+|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGNNSHKYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGMIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVKKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
>NZ_CP014667.1|WP_000131027.1|419863_421897_+|choline-BCCT-transporter-BetT
MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPITQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRGAYVELKNLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA
>NZ_CP014667.1|WP_001298544.1|419147_419735_-|transcriptional-regulator-BetI
MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAELRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPRQQAQEAGYGLAALIDGLWLRAALSGKPLDKPLAHSLTRHFITQHLSTD
>NZ_CP014667.1|WP_000089053.1|417661_419134_-|betaine-aldehyde-dehydrogenase
MSRMAEQQLYIHGGYTSATSGHTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLELAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRADDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILIYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKFQSIF
>NZ_CP014667.1|WP_000661659.1|430391_431342_+|carbamate-kinase-family-protein
MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGEFFSESQRDELQKANPDWRFVEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTEAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPECLPAALRGETGTHIIKT
>NZ_CP014667.1|WP_000662396.1|431351_432734_+|amidohydrolase-family-protein
MKENNSRREFLSQSGKMVTAAALFGPSVPLAHAGVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFKCEIVAFPQHGLLLSKSESLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDKLAHRMVAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
>NZ_CP014667.1|WP_000692732.1|433110_434160_+|NADPH-dependent-aldehyde-reductase-YahK
MKIKAVGAYSAKQPLEPMDITRREPGPHDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKHAPGDLVGVGCIVDSCKHCEECEDGLENYCDYMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSESKREAAKALGADEVVNSRNADEMVAHVKSFDFILNTVAAPHNLDDFTTLLKRDGTITLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD
>NZ_CP014667.1|WP_000976979.1|435041_435716_-|LysE-family-transporter
MMKLLHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSSMRRHSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLHAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR
>NZ_CP014667.1|WP_000691951.1|435862_436138_+|DUF1471-domain-containing-protein
MKIISKMLVGALAFAVTNVYAAELMTKAEFEKVASQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK
>NZ_CP014667.1|WP_000941081.1|436238_437825_-|propionate-catabolism-operon-regulatory-protein-PrpR
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLASERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDLLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGQFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFAAALRQGLQASETMLVHYDWPGNIRELRNMMERLALFLSVESTPDLTPQFLQLLLPELARESAKTPIPGLLTAQQALEKFNGDKTAAANYLGISRTTFWRRLKS
>NZ_CP014667.1|WP_000052198.1|438063_438954_+|methylisocitrate-lyase
MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNILRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDDLFARGQVK
>NZ_CP014667.1|WP_001285909.1|439113_440283_+|2-methylcitrate-synthase
MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRQFVALDKRQ
>NZ_CP014667.1|WP_000116026.1|440316_441768_+|2-methylcitrate-dehydratase
MSVQINNIRPEFDREIVDIVDYVMNYEISSRVAYDTAHYCLLDTLGCGLEALEYPACKKLLGPIVPGTVVPNGVRVPGTQFQLDPVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGILATADWLSRNAVASGKAPLTMKQVLTGMIKAHEIQGCIALENSFNRVGLDHVLLVKVASTAVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAPVWGFYDVSFKGESFRFQRPYGSYVMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDKKGPLNNPADRDHCIQYMVAIPLLFGRLTAADYEDNVAQDKRIDALREKINCFEDPAFTADYHDPEKRAIANAITLEFTDGTRFEEVVVEYPIGHTRRRQDGIPKLVEKFKINLARQFPTRQQQRILEVSLDRTRLEQMPVNEYLDLYVI
>NZ_CP014667.1|WP_000010261.1|441807_443694_+|propionate--CoA-ligase
MSFSEFYQRSINEPEQFWAEQARRIDWQTPFTQTLDHSNPPFARWFCEGRTNLCHNAIDRWLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRSLGVQRGDRVLVYMPMIAEAHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIVSADAGARGGKIIPYKKLLDDAISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRHQHIGARVPMAWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGGVFFCASDIGWVVGHSYIVYAPLLAGMATIVYEGLPTWPDCGVWWKIVEKYQVSRMFSAPTAIRVLKKFPTAEIRKHDLSSLEVLYLAGEPLDEPTASWVSNTLDVPVIDNYWQTESGWPIMAIARGLDDRPTRLGSPGVPMYGYNVQLLNEVTGEPCGVNEKGMLVVEGPLPPGCIQTIWGDDDRFVKTYWSLFSRPVYATFDWGIRDADGYHFILGRTDDVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQVAVAFVIPKESDSLEDREVAHLQEKAIMALVDSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLDQIRQAMEE

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Crispr_ID: NZ_CP014667_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014667_2

958517-958664

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP014667_2

>merge|NZ_CP014667|2|958517-958664|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAAGCACACGTCGAGCTGGTGGGGATTAATGCTGGGTTCACTGCCGTACAGGCAGCTTAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACAAGCTCACTGCCGTACAGGCAGATAAAATG

>NZ_CP014667|2|2|958517-958664|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCACACGTCGAGCTGGTGGGGATTAATGCTGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTGCCGCGGATCCTGTCTGCCAATAATGACAA
GCTCACTGCCGTACAGGCAGATAAAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014667.1\|WP_001298307.1\|951330_951504_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014667.1\|WP_000077103.1\|966045_970065_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP014667.1\|WP_001298305.1\|954883_955060_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014667.1\|WP_000126651.1\|950544_950967_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942
NZ_CP014667.1\|WP_001043558.1\|962018_963785_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP014667.1\|WP_000886683.1\|972279_973572_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP014667.1\|WP_000761778.1\|948247_950002_+\|DNA-primase	unknown	unknown	gnl\|CDD\|225913
NZ_CP014667.1\|WP_000520781.1\|955676_955997_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP014667.1\|WP_000557485.1\|950290_950548_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014667.1\|WP_001295343.1\|970223_970835_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP014667.1\|WP_000140261.1\|954254_954536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014667.1\|WP_001202199.1\|960296_962018_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP014667.1\|WP_001082952.1\|951596_953510_+\|Clp-protease-ClpP	unknown	unknown	gnl\|CDD\|132927
NZ_CP014667.1\|WP_001040187.1\|959047_959266_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP014667.1\|WP_000067755.1\|970845_972189_+\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP014667.1\|WP_001241673.1\|959550_960255_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP014667.1\|WP_000537432.1\|963907_964873_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP014667.1\|WP_000373413.1\|953766_954252_+\|DUF1441-family-protein	unknown	unknown	gnl\|CDD\|311303
NZ_CP014667.1\|WP_000228473.1\|965416_965911_+\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP014667.1\|WP_000934027.1\|956027_958304_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828

Protein	Function_ID	Function_description	E-value
NZ_CP014667.1\|WP_000077103.1\|966045_970065_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP014667.1\|WP_000067755.1\|970845_972189_+\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP014667.1\|WP_000126651.1\|950544_950967_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	8.45973e-25
NZ_CP014667.1\|WP_001043558.1\|962018_963785_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP014667.1\|WP_000886683.1\|972279_973572_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP014667.1\|WP_000761778.1\|948247_950002_+\|DNA-primase	gnl\|CDD\|225913	COG3378, COG3378, Phage associated DNA primase [General function prediction only].	1.16187e-73
NZ_CP014667.1\|WP_000520781.1\|955676_955997_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP014667.1\|WP_001295343.1\|970223_970835_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
NZ_CP014667.1\|WP_000934027.1\|956027_958304_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP014667.1\|WP_001202199.1\|960296_962018_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP014667.1\|WP_001082952.1\|951596_953510_+\|Clp-protease-ClpP	gnl\|CDD\|132927	cd07016, S14_ClpP_1, Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP, although the proteolytic subunit alone does possess some catalytic activity. Active site consists of the triad Ser, His and Asp; some members have lost all of these active site residues and are therefore inactive, while others may have one or two large insertions. ClpP seems to prefer hydrophobic or non-polar residues at P1 or P1' positions in its substrate. The protease exists as a tetradecamer made up of two heptameric rings stacked back-to-back such that the catalytic triad of each subunit is located at the interface between three monomers, thus making oligomerization essential for function.	5.13418e-81
NZ_CP014667.1\|WP_001040187.1\|959047_959266_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP014667.1\|WP_000228473.1\|965416_965911_+\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP014667.1\|WP_000537432.1\|963907_964873_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP014667.1\|WP_000373413.1\|953766_954252_+\|DUF1441-family-protein	gnl\|CDD\|311303	pfam07278, DUF1441, Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	2.65817e-39
NZ_CP014667.1\|WP_001241673.1\|959550_960255_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.60016e-139

>NZ_CP014667.1|WP_000934027.1|956027_958304_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGSRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP014667.1|WP_000520781.1|955676_955997_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP014667.1|WP_001298305.1|954883_955060_+|hypothetical-protein
MFVIPVPLKRNTRFRRSWWTHSHIQLTLRVSIADPQTTTRQQNVTRFSRSMASLDPLS
>NZ_CP014667.1|WP_000140261.1|954254_954536_+|hypothetical-protein
MTESEILRLIRCAGGISQLADEQAAQPDTVTAENYARVVAEVMLRDGIELNGVDMRNIRTRVLELLAYRRRSQQRRESAKNTYQWKRPERLRR
>NZ_CP014667.1|WP_000373413.1|953766_954252_+|DUF1441-family-protein
MDRELKNLMLNINQLAAIAGICRQTAAARLKNIQPAGGHDKLKLYRVTDILTCFLDLPVPASLEEMEPHDRKAWYQSERERLKFEQETAQLIPADDVRKEMAIWGEIVSEELAKLPNILARDAGLKPMAVNRVQSIIDDLRNQIISRMVKNDVVNEVAKQA
>NZ_CP014667.1|WP_001082952.1|951596_953510_+|Clp-protease-ClpP
MNRWYTIKAADVRGAADISIYEEIGGFGVTAKQFAEDLKALGDVSHINLRIHSPGGDVFEGIAIYNLLRNHPADITVYIDGVAASMASVVAMAGDRVVMPENAMMMIHKPWGISGGNAGDMRDYADLLDKVETVLIPAYARKTGKSAQEITAMLEDETWMDGKECLKHGFADELLPSVRAMARIESKRTGDFLHMPETIKGMITPPQGAANIAGNEQKRINGISEVFSLFGSRYDGIKMACLEDASCTPEMAREKLLNELGRESTPSNKNTPPHIYAGNGNITGDAIRQGLYSRLGYERPERGNPYAMMSLFEMAQASLVDRGITVSGFINRSQVVNAAFTHSSSDFSHILAGGAEKSVLKGWQDSGETFQKWTRTGSLSNFHEAKRVGLNGFSKLDKVPEGAEYKYITTSDKGVPIALATYGNIFSVTRQAIINDDLTQLTTIPMAMGRAAARTVGNLVYLLLTSNGKFTDGKALFHADHKNLIAKDMDMVGLDEARKRMRLQEDANGDSLNITPAFVLVPAALESAARRAILSSSSVFPVGDESTINQNPGIINVVKDMAEVIVEPRLDKANSKEWYVAAAKGMDTIEVAYLDGMDTPYLEEQVGFTVDGVAWKVRIDAGVAALDYRGLLKSSGA
>NZ_CP014667.1|WP_001298307.1|951330_951504_-|hypothetical-protein
MMIYMVDPVLLKAHNGLRIQMNGTTFYLACVQVVNTIHSNFLLLTKLRALLIDKSGR
>NZ_CP014667.1|WP_000126651.1|950544_950967_+|single-stranded-DNA-binding-protein
MTAQIAAYGRLVADPQLKTTSKGTQMTMASMAVPLPCSQADDGQATMWLSVIAFGRQAEALAKHRKGELLSVAGNMQVNQWTGQNGETRQGWQVIADSVISARTARPGGKKGQQGQATDALNRAKQQAGNDDPYGDNIPF
>NZ_CP014667.1|WP_000557485.1|950290_950548_+|hypothetical-protein
MHTSGKLNNQKKQHSRPIDLTEHWLRVAIKIIDRNAGEGYAKAHPELISAFMTTAAANFATLTEREIAEAEQVTTINVKTGEQTA
>NZ_CP014667.1|WP_000761778.1|948247_950002_+|DNA-primase
MKLAPNVKKQPRGIKHKDTEVIIFAGSDAWAHAKQWQEQDGPASGDDVPPVWLGPNQLAELDALKIVPDGKKRVRLYQAGELDLVETKKIGQKLAAADIQDANFYPEGTHGQEVENWREYLARERQNLSDGLVIELPVTQKAQLSQMADSERALLLADRFDGVCVHPESEIVHVWRGGVWCPVSTMELSREMVAIYSEHKATFSKRVISNAVEALKVIAEPMGEPSGDLLPFANGALDLKTGEFSPHSPENWITTHNGIEYTPPVPGENIRDNAPNFHKWLDHAAGKDPGKMMRICAALYMIMANRYDWQMFIEATGDGGSGKSTFTHIASLLAGKQNTVSAEMTSLDDAGGRAQVVGSRLIVLADQPKYTGEGTGIKKITGGDPVEINPKYEKRFTAVIRAVVLATNNNPMIFTERAGGVARRRVIFRFDNIVSEAEKDRELPEKIAAEIPVIIRRLLANFADPEKARALLLEQRDGDEALAIKQQTDPVIEFCQFLNFLEEARGLMMGGGGDSVKYTTRNSLYRVYLAFMAYAGRTKPLNVNDFGKAMKPAAKVYGHEYITRKVKGVTQTNAITTDDCDAFL
>NZ_CP014667.1|WP_001040187.1|959047_959266_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP014667.1|WP_001241673.1|959550_960255_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
>NZ_CP014667.1|WP_001202199.1|960296_962018_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIYLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLTRQGRYYQFKQGL
>NZ_CP014667.1|WP_001043558.1|962018_963785_-|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLFLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAIYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGIDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP014667.1|WP_000537432.1|963907_964873_-|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP014667.1|WP_000228473.1|965416_965911_+|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP014667.1|WP_000077103.1|966045_970065_+|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDEEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPTQPTVAWQPVPGPQTGEPVIAPAPEGYPHQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPVQQPYYAPAAEQPVQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQYQQPQYQQPQQPVAQQPQYQQPQQPVAPQQQYQQPQQPVAQQPQYQQPQQPVAPQPHDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGVGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP014667.1|WP_001295343.1|970223_970835_+|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP014667.1|WP_000067755.1|970845_972189_+|replication-associated-recombination-protein-RarA
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP014667.1|WP_000886683.1|972279_973572_+|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG

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Crispr_ID: NZ_CP014667_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014667_3

2451420-2451533

Orphan

Consensus_repeat	Method
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014667_3

>merge|NZ_CP014667|3|2451420-2451533|CRISPRCasFinder
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCACTGGATGCCCAGATGCGGCATGAACGCCCTACCCAGCCTACGATGCGGTTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA

>NZ_CP014667|3|3|2451420-2451533|CRISPRCasFinder
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	CTGGATGCCCAGATGCGGCATGAACGCCCTACCCAGCCTACGATGCGG
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014667.1\|WP_000857237.1\|2456560_2458189_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP014667.1\|WP_000140530.1\|2460817_2461777_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP014667.1\|WP_000536494.1\|2434011_2438526_-\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP014667.1\|WP_000150339.1\|2461789_2461975_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
NZ_CP014667.1\|WP_024179062.1\|2444642_2448401_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP014667.1\|WP_001297934.1\|2438549_2439173_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP014667.1\|WP_000012348.1\|2439169_2440858_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP014667.1\|WP_000990783.1\|2443780_2444503_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP014667.1\|WP_001281242.1\|2441006_2443634_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP014667.1\|WP_000779093.1\|2453848_2454925_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP014667.1\|WP_001225875.1\|2431580_2432357_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP014667.1\|WP_001209948.1\|2458178_2459438_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP014667.1\|WP_000948732.1\|2454929_2456288_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP014667.1\|WP_000301031.1\|2452995_2453646_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP014667.1\|WP_001104799.1\|2432361_2434011_-\|YfaQ-family-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP014667.1\|WP_000786514.1\|2430322_2431507_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP014667.1\|WP_001000377.1\|2459434_2460625_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP014667.1\|WP_000135040.1\|2452687_2452942_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP014667.1\|WP_000332036.1\|2451557_2452688_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP014667.1\|WP_001075170.1\|2449082_2451368_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649

Protein	Function_ID	Function_description	E-value
NZ_CP014667.1\|WP_000857237.1\|2456560_2458189_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP014667.1\|WP_000140530.1\|2460817_2461777_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP014667.1\|WP_000536494.1\|2434011_2438526_-\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP014667.1\|WP_000150339.1\|2461789_2461975_+\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	7.27111e-31
NZ_CP014667.1\|WP_024179062.1\|2444642_2448401_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP014667.1\|WP_001297934.1\|2438549_2439173_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	4.78627e-139
NZ_CP014667.1\|WP_000012348.1\|2439169_2440858_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP014667.1\|WP_000990783.1\|2443780_2444503_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.45677e-171
NZ_CP014667.1\|WP_001281242.1\|2441006_2443634_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP014667.1\|WP_000779093.1\|2453848_2454925_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP014667.1\|WP_001225875.1\|2431580_2432357_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.7479e-153
NZ_CP014667.1\|WP_001209948.1\|2458178_2459438_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP014667.1\|WP_000948732.1\|2454929_2456288_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP014667.1\|WP_000301031.1\|2452995_2453646_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	3.42273e-158
NZ_CP014667.1\|WP_001104799.1\|2432361_2434011_-\|YfaQ-family-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	8.69726e-124
NZ_CP014667.1\|WP_000786514.1\|2430322_2431507_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP014667.1\|WP_001000377.1\|2459434_2460625_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP014667.1\|WP_000135040.1\|2452687_2452942_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP014667.1\|WP_000332036.1\|2451557_2452688_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP014667.1\|WP_001075170.1\|2449082_2451368_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0

>NZ_CP014667.1|WP_001075170.1|2449082_2451368_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP014667.1|WP_024179062.1|2444642_2448401_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSGNGAAAVIDSCQGYDIKASCQASRQSLSGNMQDWSIADGQWLIFSGMANNASGGAVFLQHSAEFTISPQNETGMTLFADNSVSGEYNNGGAIFAKENSTINLANVIFDSNVAGGYGGAIYSAGTNDTGAADLRVTNAVFHNNIANDGKGGAIYTINNDVYLSDDAFNNNQAYTSTSYSDGDGGAIDVTDNSTDNTHLSGKTIINNTSFTNNYAEGYGGAIYTSSTTSPYLIDISVDDNYDQNNGVMIDENNSASGYDHSATAAAGGFMYIGHSVAEFNIAADKTLVIGNTSNDGAIDSLAGTGVIVKEGAGELVLNADNNAFTGEMSIQNGEVTLGRSDELMNVGDTHCQSDPQDCFGLMVGSTVHSEYQAELNVGNTQQTFVHSLTGFANGILNIDAGGNVTVNQGGFSGSIQGEGQLTVAQDGSYLLTGAQSMALTGDIVVEDNAVLSLAGNQADLRAMQSDPQSIVLNGGVLDLSDFTTWDGDSSYNDGLQISGSGGTVIGSNDVVDISSGDDLHIGGSDASQNGVYVVINAGDQRVTLANNNGYLGNTQIASGTLEVSDNSQLGDTSYNRSVIFTDPQQHSEMDVTTDVDTRSATTGQGRNIEMRADGEIHVEDGVDTQWGGLMADSTGQQLDSVSTLTKSGGGTLELTASGTATSAVRVEDGTLKGEAENIIPYVSSLWVGEDGVFETGQNQDIRSIDATSGGDIDITDGTVLRLTQQDTNQALDASLFSGDGTLVNATDGVTLAGELNTNLETDSLTYLSDVTVNGNLTNTSGAISLQNSVAGDTLTVNGDYTGGGTLFLDSELNGDDSASDQLVLNGNTSGNTTVVVNPITGIGEPTSTGIKVVDFAADPAQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVNPTPPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYFNNLRAANQAFVMERRDHAGGDGQTLNLRVIGGRYHYTAVGQLAQHEDTSTVQLSGNLFSGHWGDDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYVWFNNDVSEQDDGVDHYHSSGIIASLEAGYQWLPGHGVVIEPQTQVIYQGVHQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVGVTPTLDLNYYHDPHATEIEEDGSTISDDAVKQRGEIKVGITGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP014667.1|WP_000990783.1|2443780_2444503_+|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHKEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHMTGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP014667.1|WP_001281242.1|2441006_2443634_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP014667.1|WP_000012348.1|2439169_2440858_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGLGAIVLLSTGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKLNSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEAAAIASDLLSGKKRWETSFGLEERTAEKTPVRQRIVVSARLLGFGYQRLVPSFAGMRFEMGNDGWHSFLALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMVDVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP014667.1|WP_001297934.1|2438549_2439173_-|DUF1175-domain-containing-protein
MRHGLLVLICWLYCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANEALKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYIIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP014667.1|WP_000536494.1|2434011_2438526_-|alpha-2-macroglobulin-family-protein
MGTGLANADDSLPSSNYAPPAGGTFFLLADSSFSRSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGKQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKTGSEILWTDGLGVMTRGVTDGSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRKQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDDNGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELQSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTSHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKSLYMKWSMPTVYRMGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMFGGGDNALTLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTKDFSEADTSDINDSMILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEYWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAPGSEWIGMQVK
>NZ_CP014667.1|WP_001104799.1|2432361_2434011_-|YfaQ-family-protein
MNWYRIVWLLALVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSVLPDTLTTPLGSLWKLYIYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDSALVRSCGLYFAPQRLHIGADMWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATALNRVLPVPTQVASGQCVLVDLFARYPLKKVTEEKSTTAVKPGVLNGRYRVTFANGNHMTFVSHGETTLLTVKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTYLQQNADRDGDCLSIPDSSATQRVSASPATVGARTMTAWTQDLIYAGDPVHYHGSRVTEGTLSWRHATAQAGQGERYDQILAFAYPDNNLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLISGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP014667.1|WP_001225875.1|2431580_2432357_-|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQTINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTLGAGAIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP014667.1|WP_000786514.1|2430322_2431507_+|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGCFNGSLASTSAIDLGATVIKAAIERAKIDSLHIDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALATQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLNPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFEPEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NZ_CP014667.1|WP_000332036.1|2451557_2452688_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NZ_CP014667.1|WP_000135040.1|2452687_2452942_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP014667.1|WP_000301031.1|2452995_2453646_-|lipopolysaccharide-kinase-InaA
MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP014667.1|WP_000779093.1|2453848_2454925_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNVLEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP014667.1|WP_000948732.1|2454929_2456288_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP014667.1|WP_000857237.1|2456560_2458189_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVHVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNSRPCTTADLALPGSQEPAEATLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP014667.1|WP_001209948.1|2458178_2459438_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTEIHSGLESLRQQAPAHPYTLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLKVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLANDKLWHWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERDGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP014667.1|WP_001000377.1|2459434_2460625_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP014667.1|WP_000140530.1|2460817_2461777_+|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFSPDAARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSEGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKIEGWQEGKLEGLQKGKVEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCY
>NZ_CP014667.1|WP_000150339.1|2461789_2461975_+|hypothetical-protein
MTIAERLRQEGHQIGWQEGKLEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH

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Crispr_ID: NZ_CP014667_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014667_4

4349390-4349591

Orphan

Consensus_repeat	Method
GTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP014667_4

>merge|NZ_CP014667|4|4349390-4349591|PILER-CR
CGCATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGTATCCGGCATACAGTGCCCGATGCGACGCTGCCGCGTCTTATCGGGCCTACAAAAGTTCTGAACCGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAA

>NZ_CP014667|4|1|4349390-4349591|PILER-CR
CGCATCCGGCAATTGGTGCACGATGCCTGATGCGAC	GCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGC
CGTATCCGGCATACAGTGCCCGATGCGACGCTGCCG	CGTCTTATCGGGCCTACAAAAGTTCTGAACCGTAGACCGGATAAGGCGTTCACGCC
GCATCCGGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014667.1\|WP_001298607.1\|4345639_4346422_+\|3'-5'-ssDNA/RNA-exonuclease-TatD	unknown	unknown	gnl\|CDD\|182449
NZ_CP014667.1\|WP_001335246.1\|4354478_4355093_+\|IMPACT-family-protein	unknown	unknown	gnl\|CDD\|183205
NZ_CP014667.1\|WP_001052191.1\|4363232_4363817_-\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_CP014667.1\|WP_000339804.1\|4347073_4348567_+\|4-hydroxy-3-polyprenylbenzoate-decarboxylase	unknown	unknown	gnl\|CDD\|236796
NZ_CP014667.1\|WP_000187545.1\|4342311_4343952_+\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	unknown	unknown	gnl\|CDD\|235310
NZ_CP014667.1\|WP_000227959.1\|4340940_4341696_+\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	unknown	unknown	gnl\|CDD\|234689
NZ_CP014667.1\|WP_001192400.1\|4346418_4346907_-\|transcription/translation-regulatory-transformer-protein-RfaH	unknown	unknown	gnl\|CDD\|181611
NZ_CP014667.1\|WP_000545665.1\|4355131_4356583_+\|Trk-system-potassium-transporter-TrkH	unknown	unknown	gnl\|CDD\|182698
NZ_CP014667.1\|WP_000853963.1\|4356594_4357140_+\|menaquinone-dependent-protoporphyrinogen-IX-dehydrogenase	unknown	unknown	gnl\|CDD\|182966
NZ_CP014667.1\|WP_001298601.1\|4348612_4349314_+\|NAD(P)H-flavin-reductase	unknown	unknown	gnl\|CDD\|236142
NZ_CP014667.1\|WP_000965960.1\|4350768_4352958_-\|fatty-acid-oxidation-complex-subunit-alpha-FadB	unknown	unknown	gnl\|CDD\|183293
NZ_CP014667.1\|WP_001295263.1\|4363886_4364156_+\|YihD-family-protein	unknown	unknown	gnl\|CDD\|368826
NZ_CP014667.1\|WP_000109949.1\|4344821_4345598_+\|Sec-independent-protein-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|182840
NZ_CP014667.1\|WP_001065498.1\|4364232_4365219_+\|stress-response-kinase-SrkA	unknown	unknown	gnl\|CDD\|236974
NZ_CP014667.1\|WP_065089979.1\|4353147_4354479_+\|Xaa-Pro-dipeptidase	unknown	unknown	gnl\|CDD\|237444
NZ_CP014667.1\|WP_000438744.1\|4349595_4350759_-\|acetyl-CoA-C-acyltransferase-FadA	unknown	unknown	gnl\|CDD\|181592
NZ_CP014667.1\|WP_001296603.1\|4341709_4342315_+\|ubiquinone-biosynthesis-protein-UbiJ	unknown	unknown	gnl\|CDD\|225706
NZ_CP014667.1\|WP_000907613.1\|4362723_4363251_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|236750
NZ_CP014667.1\|WP_001295260.1\|4344030_4344300_+\|Sec-independent-protein-translocase-subunit-TatA	unknown	unknown	gnl\|CDD\|179592
NZ_CP014667.1\|WP_000459600.1\|4344303_4344819_+\|Sec-independent-protein-translocase-subunit-TatB	unknown	unknown	gnl\|CDD\|179334

Protein	Function_ID	Function_description	E-value
NZ_CP014667.1\|WP_001298607.1\|4345639_4346422_+\|3'-5'-ssDNA/RNA-exonuclease-TatD	gnl\|CDD\|182449	PRK10425, PRK10425, 3'-5' ssDNA/RNA exonuclease TatD.	0
NZ_CP014667.1\|WP_001335246.1\|4354478_4355093_+\|IMPACT-family-protein	gnl\|CDD\|183205	PRK11568, PRK11568, IMPACT family protein.	4.48916e-152
NZ_CP014667.1\|WP_001052191.1\|4363232_4363817_-\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	4.97316e-99
NZ_CP014667.1\|WP_000339804.1\|4347073_4348567_+\|4-hydroxy-3-polyprenylbenzoate-decarboxylase	gnl\|CDD\|236796	PRK10922, PRK10922, 4-hydroxy-3-polyprenylbenzoate decarboxylase.	0
NZ_CP014667.1\|WP_000187545.1\|4342311_4343952_+\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	gnl\|CDD\|235310	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed.	0
NZ_CP014667.1\|WP_000227959.1\|4340940_4341696_+\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	1.2623e-150
NZ_CP014667.1\|WP_001192400.1\|4346418_4346907_-\|transcription/translation-regulatory-transformer-protein-RfaH	gnl\|CDD\|181611	PRK09014, rfaH, transcription/translation regulatory transformer protein RfaH.	7.04858e-121
NZ_CP014667.1\|WP_000545665.1\|4355131_4356583_+\|Trk-system-potassium-transporter-TrkH	gnl\|CDD\|182698	PRK10750, PRK10750, Trk system potassium transporter TrkH.	0
NZ_CP014667.1\|WP_000853963.1\|4356594_4357140_+\|menaquinone-dependent-protoporphyrinogen-IX-dehydrogenase	gnl\|CDD\|182966	PRK11104, hemG, menaquinone-dependent protoporphyrinogen IX dehydrogenase.	6.96931e-127
NZ_CP014667.1\|WP_001298601.1\|4348612_4349314_+\|NAD(P)H-flavin-reductase	gnl\|CDD\|236142	PRK08051, fre, FMN reductase; Validated.	3.9413e-172
NZ_CP014667.1\|WP_000965960.1\|4350768_4352958_-\|fatty-acid-oxidation-complex-subunit-alpha-FadB	gnl\|CDD\|183293	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB.	0
NZ_CP014667.1\|WP_001295263.1\|4363886_4364156_+\|YihD-family-protein	gnl\|CDD\|368826	pfam06288, DUF1040, Protein of unknown function (DUF1040). This family consists of several bacterial YihD proteins of unknown function.	4.97051e-53
NZ_CP014667.1\|WP_000109949.1\|4344821_4345598_+\|Sec-independent-protein-translocase-subunit-TatC	gnl\|CDD\|182840	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC.	0
NZ_CP014667.1\|WP_001065498.1\|4364232_4365219_+\|stress-response-kinase-SrkA	gnl\|CDD\|236974	PRK11768, PRK11768, serine/threonine protein kinase.	0
NZ_CP014667.1\|WP_065089979.1\|4353147_4354479_+\|Xaa-Pro-dipeptidase	gnl\|CDD\|237444	PRK13607, PRK13607, proline dipeptidase; Provisional.	0
NZ_CP014667.1\|WP_000438744.1\|4349595_4350759_-\|acetyl-CoA-C-acyltransferase-FadA	gnl\|CDD\|181592	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.	0
NZ_CP014667.1\|WP_001296603.1\|4341709_4342315_+\|ubiquinone-biosynthesis-protein-UbiJ	gnl\|CDD\|225706	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown].	5.01909e-94
NZ_CP014667.1\|WP_000907613.1\|4362723_4363251_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|236750	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional.	1.11706e-122
NZ_CP014667.1\|WP_001295260.1\|4344030_4344300_+\|Sec-independent-protein-translocase-subunit-TatA	gnl\|CDD\|179592	PRK03554, tatA, Sec-independent protein translocase subunit TatA.	6.75664e-44
NZ_CP014667.1\|WP_000459600.1\|4344303_4344819_+\|Sec-independent-protein-translocase-subunit-TatB	gnl\|CDD\|179334	PRK01770, PRK01770, Sec-independent protein translocase subunit TatB.	4.56825e-89

>NZ_CP014667.1|WP_001298601.1|4348612_4349314_+|NAD(P)H-flavin-reductase
MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDERDKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLTEHDIYIAGRFEMAKIARDLFCSERNAREDRLFGDAFAFI
>NZ_CP014667.1|WP_000339804.1|4347073_4348567_+|4-hydroxy-3-polyprenylbenzoate-decarboxylase
MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA
>NZ_CP014667.1|WP_001192400.1|4346418_4346907_-|transcription/translation-regulatory-transformer-protein-RfaH
MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPSTPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL
>NZ_CP014667.1|WP_001298607.1|4345639_4346422_+|3'-5'-ssDNA/RNA-exonuclease-TatD
MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAVTEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQELAFVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF
>NZ_CP014667.1|WP_000109949.1|4344821_4345598_+|Sec-independent-protein-translocase-subunit-TatC
MSVEDTQPLITHLIELRKRLLNCIISVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE
>NZ_CP014667.1|WP_000459600.1|4344303_4344819_+|Sec-independent-protein-translocase-subunit-TatB
MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNETAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKTAAPSPSSSDKP
>NZ_CP014667.1|WP_001295260.1|4344030_4344300_+|Sec-independent-protein-translocase-subunit-TatA
MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV
>NZ_CP014667.1|WP_000187545.1|4342311_4343952_+|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB
MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKPLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
>NZ_CP014667.1|WP_001296603.1|4341709_4342315_+|ubiquinone-biosynthesis-protein-UbiJ
MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGFSTSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLAALIRSGELEVQGDIQVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKALRGGAKFLHHGIKRQQRYVAEAITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK
>NZ_CP014667.1|WP_000227959.1|4340940_4341696_+|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE
MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKTMMQDAGFESVDYYNLTAGVVALHRGYKF
>NZ_CP014667.1|WP_000438744.1|4349595_4350759_-|acetyl-CoA-C-acyltransferase-FadA
MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARDLGLKPRACVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMEHKDVQFGLATMCIGLGQGIATVFERV
>NZ_CP014667.1|WP_000965960.1|4350768_4352958_-|fatty-acid-oxidation-complex-subunit-alpha-FadB
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAMAILRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFNANRFGQKNGLGFWRYKEDSKGKPKKEEDVVVDDLLAKVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGMRNKARHNEPYYPPVEPARPVGDLKTA
>NZ_CP014667.1|WP_065089979.1|4353147_4354479_+|Xaa-Pro-dipeptidase
MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLDEHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPNSFWTEDVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRSFKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIVALNEHAAVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKDVNDEQLALIATMKAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIESLLAPWREGQFSKHFNWQKIEALKPFGGIRIEDNVVIHENNVENMTRDLKLA
>NZ_CP014667.1|WP_001335246.1|4354478_4355093_+|IMPACT-family-protein
MESWLIPAAPVMVVEEIKKSRFITLLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE
>NZ_CP014667.1|WP_000545665.1|4355131_4356583_+|Trk-system-potassium-transporter-TrkH
MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFSLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSMNPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE
>NZ_CP014667.1|WP_000853963.1|4356594_4357140_+|menaquinone-dependent-protoporphyrinogen-IX-dehydrogenase
MKTLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQWENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTNSYARKFLMSSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIAHLTDKPTLK
>NZ_CP014667.1|WP_000907613.1|4362723_4363251_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLHFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQDG
>NZ_CP014667.1|WP_001052191.1|4363232_4363817_-|molybdenum-cofactor-guanylyltransferase-MobA
MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQVSGLKVIEDSLADYPGPLAGMLSVMQQESGEWFLFCPCDTPYIPHDLASRLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAFMRLAGGHAVDFSDRKEAFINVNTPEELARWQEKR
>NZ_CP014667.1|WP_001295263.1|4363886_4364156_+|YihD-family-protein
MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
>NZ_CP014667.1|WP_001065498.1|4364232_4365219_+|stress-response-kinase-SrkA
MNNSAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTVTFIEQAKVLQEPPLQLTPMY

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Crispr_ID: NZ_CP014667_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014667_5

4410018-4410144

Orphan

Consensus_repeat	Method
GTAGGCCGGATAAGGCACTCGTGCCGCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014667_5

>merge|NZ_CP014667|5|4410018-4410144|CRISPRCasFinder
GTAGGCCGGATAAGGCACTCGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCA

>NZ_CP014667|5|4|4410018-4410144|CRISPRCasFinder
GTAGGCCGGATAAGGCACTCGTGCCGCATCCGGCA	ATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCT
GTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014667.1\|WP_000063507.1\|4414916_4415951_-\|L-rhamnose/proton-symporter-RhaT	unknown	unknown	gnl\|CDD\|115061
NZ_CP014667.1\|WP_000217156.1\|4413161_4413998_+\|HTH-type-transcriptional-activator-RhaS	unknown	unknown	gnl\|CDD\|184094
NZ_CP014667.1\|WP_000753582.1\|4405424_4406258_+\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
NZ_CP014667.1\|WP_000027720.1\|4399707_4400637_-\|formate-dehydrogenase-accessory-protein-FdhE	unknown	unknown	gnl\|CDD\|179595
NZ_CP014667.1\|WP_178278646.1\|4406286_4406970_+\|DUF3829-domain-containing-protein	unknown	unknown	gnl\|CDD\|372366
NZ_CP014667.1\|WP_001270236.1\|4418248_4418923_+\|6-N-hydroxylaminopurine-resistance-protein	unknown	unknown	gnl\|CDD\|183182
NZ_CP014667.1\|WP_000829013.1\|4400633_4401269_-\|formate-dehydrogenase-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|182608
NZ_CP014667.1\|WP_001166063.1\|4417116_4418100_+\|2-keto-3-deoxygluconate-transporter	unknown	unknown	gnl\|CDD\|273271
NZ_CP014667.1\|WP_000619492.1\|4408825_4409140_-\|L-rhamnose-mutarotase	unknown	unknown	gnl\|CDD\|131674
NZ_CP014667.1\|WP_000580417.1\|4419094_4420468_-\|envelope-stress-sensor-histidine-kinase-CpxA	unknown	unknown	gnl\|CDD\|236532
NZ_CP014667.1\|WP_001298417.1\|4416236_4416857_+\|superoxide-dismutase-[Mn]	unknown	unknown	gnl\|CDD\|182843
NZ_CP014667.1\|WP_001033719.1\|4420464_4421163_-\|envelope-stress-response-regulator-transcription-factor-CpxR	unknown	unknown	gnl\|CDD\|182864
NZ_CP014667.1\|WP_077634631.1\|4402180_4405231_-\|formate-dehydrogenase-N-subunit-alpha	unknown	unknown	gnl\|CDD\|273689
NZ_CP014667.1\|WP_001298699.1\|4410148_4411408_-\|L-rhamnose-isomerase	unknown	unknown	gnl\|CDD\|179217
NZ_CP014667.1\|WP_000144094.1\|4411404_4412874_-\|rhamnulokinase	unknown	unknown	gnl\|CDD\|182609
NZ_CP014667.1\|WP_000331377.1\|4401265_4402168_-\|formate-dehydrogenase-O-subunit-beta	unknown	unknown	gnl\|CDD\|273705
NZ_CP014667.1\|WP_001296618.1\|4413981_4414920_+\|HTH-type-transcriptional-activator-RhaR	unknown	unknown	gnl\|CDD\|184091
NZ_CP014667.1\|WP_001179744.1\|4409149_4409974_-\|rhamnulose-1-phosphate-aldolase	unknown	unknown	gnl\|CDD\|179615
NZ_CP014667.1\|WP_000749943.1\|4407390_4408785_+\|carbohydrate-porin	unknown	unknown	gnl\|CDD\|374908
NZ_CP014667.1\|WP_001298592.1\|4399274_4399493_+\|CopG-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|279710

Protein	Function_ID	Function_description	E-value
NZ_CP014667.1\|WP_000063507.1\|4414916_4415951_-\|L-rhamnose/proton-symporter-RhaT	gnl\|CDD\|115061	pfam06379, RhaT, L-rhamnose-proton symport protein (RhaT). This family consists of several bacterial L-rhamnose-proton symport protein (RhaT) sequences.	0
NZ_CP014667.1\|WP_000217156.1\|4413161_4413998_+\|HTH-type-transcriptional-activator-RhaS	gnl\|CDD\|184094	PRK13503, PRK13503, HTH-type transcriptional activator RhaS.	0
NZ_CP014667.1\|WP_000753582.1\|4405424_4406258_+\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	1.63704e-160
NZ_CP014667.1\|WP_000027720.1\|4399707_4400637_-\|formate-dehydrogenase-accessory-protein-FdhE	gnl\|CDD\|179595	PRK03564, PRK03564, formate dehydrogenase accessory protein FdhE; Provisional.	0
NZ_CP014667.1\|WP_178278646.1\|4406286_4406970_+\|DUF3829-domain-containing-protein	gnl\|CDD\|372366	pfam12889, DUF3829, Protein of unknown function (DUF3829). This is a small family of proteins from several bacterial species, whose function is not known. It may, however, be related to the GvpL_GvpF family of proteins, pfam06386.	1.83732e-52
NZ_CP014667.1\|WP_001270236.1\|4418248_4418923_+\|6-N-hydroxylaminopurine-resistance-protein	gnl\|CDD\|183182	PRK11536, PRK11536, 6-N-hydroxylaminopurine resistance protein; Provisional.	4.41365e-179
NZ_CP014667.1\|WP_000829013.1\|4400633_4401269_-\|formate-dehydrogenase-cytochrome-b556-subunit	gnl\|CDD\|182608	PRK10639, PRK10639, formate dehydrogenase cytochrome b556 subunit.	6.79831e-145
NZ_CP014667.1\|WP_001166063.1\|4417116_4418100_+\|2-keto-3-deoxygluconate-transporter	gnl\|CDD\|273271	TIGR00793, 2-keto-3-deoxygluconate_permease, 2-keto-3-deoxygluconate transporter. This family includes the characterized 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi. There are homologs of this protein found in both gram-positive and gram-negative bacteria. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	7.59733e-165
NZ_CP014667.1\|WP_000619492.1\|4408825_4409140_-\|L-rhamnose-mutarotase	gnl\|CDD\|131674	TIGR02625, L-rhamnose_mutarotase, L-rhamnose mutarotase. Members of this protein family are rhamnose mutarotase from Escherichia coli, previously designated YiiL as an uncharacterized protein, and close homologs also associated with rhamnose dissimilation operons in other bacterial genomes. Mutarotase is a term for an epimerase that changes optical activity. This enzyme was shown experimentally to interconvert alpha and beta stereoisomers of the pyranose form of L-rhamnose. The crystal structure of this small (104 amino acid) protein shows a locally asymmetric dimer with active site residues of His, Tyr, and Trp. [Energy metabolism, Sugars].	3.46584e-64
NZ_CP014667.1\|WP_000580417.1\|4419094_4420468_-\|envelope-stress-sensor-histidine-kinase-CpxA	gnl\|CDD\|236532	PRK09470, cpxA, envelope stress sensor histidine kinase CpxA.	0
NZ_CP014667.1\|WP_001298417.1\|4416236_4416857_+\|superoxide-dismutase-[Mn]	gnl\|CDD\|182843	PRK10925, PRK10925, superoxide dismutase [Mn].	1.57037e-152
NZ_CP014667.1\|WP_001033719.1\|4420464_4421163_-\|envelope-stress-response-regulator-transcription-factor-CpxR	gnl\|CDD\|182864	PRK10955, PRK10955, envelope stress response regulator transcription factor CpxR.	7.11209e-169
NZ_CP014667.1\|WP_077634631.1\|4402180_4405231_-\|formate-dehydrogenase-N-subunit-alpha	gnl\|CDD\|273689	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit. This model describes a subset of formate dehydrogenase alpha chains found mainly in proteobacteria but also in Aquifex. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits of 32 and 20 kDa. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The electrons are utilized mainly in the nitrate respiration by nitrate reductase. In E. coli and Salmonella, there are two forms of the formate dehydrogenase, one induced by nitrate which is strictly anaerobic (fdn), and one incuced during the transition from aerobic to anaerobic growth (fdo). This subunit is one of only three proteins in E. coli which contain selenocysteine. This model is well-defined, with a large, unpopulated trusted/noise gap. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	0
NZ_CP014667.1\|WP_001298699.1\|4410148_4411408_-\|L-rhamnose-isomerase	gnl\|CDD\|179217	PRK01076, PRK01076, L-rhamnose isomerase; Provisional.	0
NZ_CP014667.1\|WP_000144094.1\|4411404_4412874_-\|rhamnulokinase	gnl\|CDD\|182609	PRK10640, rhaB, rhamnulokinase; Provisional.	0
NZ_CP014667.1\|WP_000331377.1\|4401265_4402168_-\|formate-dehydrogenase-O-subunit-beta	gnl\|CDD\|273705	TIGR01582, Formate_dehydrogenase_iron-sulfur_subunit, formate dehydrogenase, beta subunit, Fe-S containing. This model represents the beta subunit of the gamma-proteobacterial formate dehydrogenase. This subunit contains four 4Fe-4S clusters and is involved in transmitting electrons from the alpha subunit (TIGR01553) at the periplasmic space to the gamma subunit which spans the cytoplasmic membrane. In addition to the gamma proteobacteria, a sequence from Aquifex aolicus falls within the scope of this model. This appears to be the case for the alpha, gamma and epsilon (accessory protein TIGR01562) chains as well. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	1.25079e-161
NZ_CP014667.1\|WP_001296618.1\|4413981_4414920_+\|HTH-type-transcriptional-activator-RhaR	gnl\|CDD\|184091	PRK13500, PRK13500, HTH-type transcriptional activator RhaR.	0
NZ_CP014667.1\|WP_001179744.1\|4409149_4409974_-\|rhamnulose-1-phosphate-aldolase	gnl\|CDD\|179615	PRK03634, PRK03634, rhamnulose-1-phosphate aldolase; Provisional.	0
NZ_CP014667.1\|WP_000749943.1\|4407390_4408785_+\|carbohydrate-porin	gnl\|CDD\|374908	pfam16966, Porin_8, Porin-like glycoporin RafY. This is a family of Gram-negative Gammaproteobacteria putative raffinose-like porins.	0
NZ_CP014667.1\|WP_001298592.1\|4399274_4399493_+\|CopG-family-transcriptional-regulator	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	1.66689e-06

>NZ_CP014667.1|WP_001179744.1|4409149_4409974_-|rhamnulose-1-phosphate-aldolase
MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQILVKVYSMGGMKQTISREELIALGQRFGVTPLASALAL
>NZ_CP014667.1|WP_000619492.1|4408825_4409140_-|L-rhamnose-mutarotase
MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKAHNLLFATVEIESEERWNAVASTDVCQRWWKYMTDVMPANADNSPVSSELQEVFYLP
>NZ_CP014667.1|WP_000749943.1|4407390_4408785_+|carbohydrate-porin
MKKSTLSLAIGLLLACSTGMAKTQHLTLEQRMALLEERLEAAEMRAAKAESQVKQLQTQQAAEIREIKAAQGNTPVNGQATAESAKKNSTSPNLLLSGYGDLKIYGDVEFNMDAESNHGLLAMTNADVNSDPTNEQWNLNGRILLGFDGMRKLDNGYFAGFSAQPLGDMHGSVNIDDAVFFFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAGGNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTVSAAMEANVVNNAYGYTDSKGNFVDQSDRTGYGMSMTWNGLKTDPENGIVVNLNTAYLDANNEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCWIDDEGTYNIHTIHASYQFANVMDMENFNIYLGTYYSILDSDGDKIHGDDSDDRYGARVRFKYFF
>NZ_CP014667.1|WP_178278646.1|4406286_4406970_+|DUF3829-domain-containing-protein
MAGLIHFVNFIILFINKTRVVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYIQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLTELKNIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQVKEADKSGMNFSFINSAGQYQLEAKKYVRRIRDKVPYSDWDKEQLQDANSSWMAEDSFPESIMRVQRNGR
>NZ_CP014667.1|WP_000753582.1|4405424_4406258_+|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MKKTQQKEIENVTNITGVRQIELWRHDDLQHPRLDEVAEEVPVALVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDFQPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSSRASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLSN
>NZ_CP014667.1|WP_077634631.1|4402180_4405231_-|formate-dehydrogenase-N-subunit-alpha
MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYDKSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCEYIAETSAHDKTASFLYALGWTQHSIGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPSSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV
>NZ_CP014667.1|WP_000331377.1|4401265_4402168_-|formate-dehydrogenase-O-subunit-beta
MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK
>NZ_CP014667.1|WP_000829013.1|4400633_4401269_-|formate-dehydrogenase-cytochrome-b556-subunit
MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE
>NZ_CP014667.1|WP_000027720.1|4399707_4400637_-|formate-dehydrogenase-accessory-protein-FdhE
MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLRELAENNPLGDYLRFAALIAHAQEVVLYDHPLEMDLTTRIKEASAQGKPPLDIHVLPRDKHWQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFIWAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAVADDLASLVLDARMEQEGYARSSINPFLFPGEGE
>NZ_CP014667.1|WP_001298592.1|4399274_4399493_+|CopG-family-transcriptional-regulator
MAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQRGETVVVDDQCKEHKE
>NZ_CP014667.1|WP_001298699.1|4410148_4411408_-|L-rhamnose-isomerase
MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDRIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSNEFYLGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEWLENVRTYEKEILSRRG
>NZ_CP014667.1|WP_000144094.1|4411404_4412874_-|rhamnulokinase
MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWNVDRLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTIYQLRALTEQQPELIPHIAHALLIPDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPDEMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNALLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHSTRQTKELCA
>NZ_CP014667.1|WP_000217156.1|4413161_4413998_+|HTH-type-transcriptional-activator-RhaS
MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQEQDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ
>NZ_CP014667.1|WP_001296618.1|4413981_4414920_+|HTH-type-transcriptional-activator-RhaR
MVFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVSFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD
>NZ_CP014667.1|WP_000063507.1|4414916_4415951_-|L-rhamnose/proton-symporter-RhaT
MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVAANIVGIGMAN
>NZ_CP014667.1|WP_001298417.1|4416236_4416857_+|superoxide-dismutase-[Mn]
MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVQKGDKLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
>NZ_CP014667.1|WP_001166063.1|4417116_4418100_+|2-keto-3-deoxygluconate-transporter
MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK
>NZ_CP014667.1|WP_001270236.1|4418248_4418923_+|6-N-hydroxylaminopurine-resistance-protein
MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTDLGLEGDEQAEKKIHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYIGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGLVSADAPLELVSRVSDMTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
>NZ_CP014667.1|WP_000580417.1|4419094_4420468_-|envelope-stress-sensor-histidine-kinase-CpxA
MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS
>NZ_CP014667.1|WP_001033719.1|4420464_4421163_-|envelope-stress-response-regulator-transcription-factor-CpxR
MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALSLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS

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Crispr_ID: NZ_CP014667_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014667_6

4838854-4838993

Orphan

Consensus_repeat	Method
TGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014667_6

>merge|NZ_CP014667|6|4838854-4838993|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACAGTCTTGCCTGATGCGACGCTGTCGCGTCTCATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

>NZ_CP014667|6|5|4838854-4838993|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA	GTCTTGCCTGATGCGACGCTGTCGCGTCTCATCAGGCCTACGAGTTCAGTGC
TGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014667.1\|WP_000416385.1\|4835453_4838309_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP014667.1\|WP_000584114.1\|4840787_4841888_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP014667.1\|WP_000397144.1\|4839009_4840521_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP014667.1\|WP_000786399.1\|4838308_4838752_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP014667.1\|WP_000002952.1\|4832930_4833347_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_CP014667.1\|WP_001294541.1\|4843130_4844633_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP014667.1\|WP_000635215.1\|4831267_4831720_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NZ_CP014667.1\|WP_000012936.1\|4831764_4832769_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP014667.1\|WP_000235828.1\|4827399_4828404_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
NZ_CP014667.1\|WP_000428628.1\|4828414_4829359_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
NZ_CP014667.1\|WP_001000688.1\|4834219_4835407_+\|DUF898-family-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP014667.1\|WP_001298045.1\|4849762_4850782_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP014667.1\|WP_001295681.1\|4841887_4842970_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP014667.1\|WP_000998702.1\|4847159_4847924_-\|gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181225
NZ_CP014667.1\|WP_001298035.1\|4833523_4834027_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP014667.1\|WP_001298080.1\|4844710_4845709_-\|DNA-binding-transcriptional-regulator-IdnR	unknown	unknown	gnl\|CDD\|380489
NZ_CP014667.1\|WP_000896740.1\|4849195_4849759_+\|gluconokinase	unknown	unknown	gnl\|CDD\|182097
NZ_CP014667.1\|WP_001197423.1\|4847947_4848979_-\|L-idonate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|182130
NZ_CP014667.1\|WP_001298043.1\|4829369_4830590_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NZ_CP014667.1\|WP_001128336.1\|4845775_4847095_-\|gnt-II-system-L-idonate-transporter	unknown	unknown	gnl\|CDD\|129873

Protein	Function_ID	Function_description	E-value
NZ_CP014667.1\|WP_000416385.1\|4835453_4838309_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP014667.1\|WP_000584114.1\|4840787_4841888_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP014667.1\|WP_000397144.1\|4839009_4840521_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP014667.1\|WP_000786399.1\|4838308_4838752_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NZ_CP014667.1\|WP_000002952.1\|4832930_4833347_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	8.18116e-69
NZ_CP014667.1\|WP_001294541.1\|4843130_4844633_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP014667.1\|WP_000635215.1\|4831267_4831720_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	1.2775e-64
NZ_CP014667.1\|WP_000012936.1\|4831764_4832769_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP014667.1\|WP_000235828.1\|4827399_4828404_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NZ_CP014667.1\|WP_000428628.1\|4828414_4829359_-\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
NZ_CP014667.1\|WP_001000688.1\|4834219_4835407_+\|DUF898-family-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	6.82189e-106
NZ_CP014667.1\|WP_001298045.1\|4849762_4850782_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	5.98969e-169
NZ_CP014667.1\|WP_001295681.1\|4841887_4842970_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP014667.1\|WP_000998702.1\|4847159_4847924_-\|gluconate-5-dehydrogenase	gnl\|CDD\|181225	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional.	0
NZ_CP014667.1\|WP_001298035.1\|4833523_4834027_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.51706e-18
NZ_CP014667.1\|WP_001298080.1\|4844710_4845709_-\|DNA-binding-transcriptional-regulator-IdnR	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	3.35057e-107
NZ_CP014667.1\|WP_000896740.1\|4849195_4849759_+\|gluconokinase	gnl\|CDD\|182097	PRK09825, idnK, gluconokinase.	2.59086e-125
NZ_CP014667.1\|WP_001197423.1\|4847947_4848979_-\|L-idonate-5-dehydrogenase	gnl\|CDD\|182130	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional.	0
NZ_CP014667.1\|WP_001298043.1\|4829369_4830590_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NZ_CP014667.1\|WP_001128336.1\|4845775_4847095_-\|gnt-II-system-L-idonate-transporter	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0

>NZ_CP014667.1|WP_000786399.1|4838308_4838752_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP014667.1|WP_000416385.1|4835453_4838309_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP014667.1|WP_001000688.1|4834219_4835407_+|DUF898-family-protein
MNDVNIGKDNSRHSFVFTGKGGEYFLICLVSFLLTIITLGIYGPWALIKCRRYIYQHVTLKGQPFSYKGTGGAIFVSMLLIVVVYLLSISCFAGQHFALGLFLFALLICGIPCMAVKSLQYQANMTSLNDIRFGFNCSMMRAWWVMLGLPVLLALVFWFALYLIAQVTTSIGGLFFNLVALSLLSAIGLGVVHGITYSKWMPLLGNNATFGIHKFSIQVNVKECIKGCMLAILTMVPFIIVIGIMIAPVFQQLMMMTMLGRSDAGSEFVLQYYPQIMASYFLYFVAILVFASYLYVTLRNLFLNNLTLANGTIRFHSSVTAIGMLLRMLAVLMGSSITCGLAYPWLKMWMVSWIANNTHVQGDLDSLELTNDDKPQDSGSLMWISRGIMPYVPFI
>NZ_CP014667.1|WP_001298035.1|4833523_4834027_-|GNAT-family-N-acetyltransferase
MNVVASPALRLRKLTVADNPAIAHVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL
>NZ_CP014667.1|WP_000002952.1|4832930_4833347_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGIRH
>NZ_CP014667.1|WP_000012936.1|4831764_4832769_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSKMMALTGNSQVKFLHCLPAFHDEQTTLGKKMAAEFGLYGGMEVTDEVFESPASIVFDQAENRMHTIKAVMVATLAK
>NZ_CP014667.1|WP_000635215.1|4831267_4831720_+|YhcH/YjgK/YiaL-family-protein
MIVGNIHHLQSWLPEELREAIEYIKSHVSDETAKGKHAIDGDRLFYLISEDTTEPGELRRAEYHARYLDIQIVLKGQEGMTFSTQPAGVPETDWLADKDIAFIGQGIDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKLLKA
>NZ_CP014667.1|WP_001298043.1|4829369_4830590_-|arginine-deiminase
MEKHYVGSEIGQLCSVMLHRPNLSLKRLTPSNCQELLFDDVLSVERAGEEHDIFANTLRQQGIEVLLLTDLLTQTLDIPEAKSWLLETQISDYRLGPTFATDVRTWLAEMSHRDLARHLSGGLTYSEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDTSCWIYNGVSINPMAKPARQRETNNLRAIYRWHPQFAGGEFIKYFGDENINYDHATLEGGDVLVIGRGAVLIGMSERTTPQGVEFLAQALFKHRQAERVIAVELPKHRYCMHLDTVMTHIDIDTFSVYPEVVRPDVNCWTLTPDGHGGLKRTQESTLLHAIEKALGIDQVRLITTGGDAFEAEREQWNDANNVLTLRPGVVVGYERNIWTNEKYDKAGITVLPIPGDELGRGRGGARCMSCPLHRDGI
>NZ_CP014667.1|WP_000428628.1|4828414_4829359_-|carbamate-kinase
MENKPTLVIALGGNALLKRGEPLEAEIQRKNIDLAAKTIAQLTQHWRVVLVHGNGPQVGLLALQNSAYAHVAPYPLDILGAESQGMIGYMLQQALKNQLPQREISVLLTQVEVDANDPAFSNPTKYIGPIYDHAQTQVLQAEKGWVFKADGHSFRRVVPSPQPKRIVERDAIQTLIAHDHLVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQIHADALLILTDADAVYLDWGKPTQRPLAQVTPELLNEMQFDAGSMGPKVTACAKFVSQCRGIAGIGSLADGPEILAGDKGTLIRLDTPITTLDPFL
>NZ_CP014667.1|WP_000235828.1|4827399_4828404_-|ornithine-carbamoyltransferase
MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQGAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGEPKEAWAERVSLMAPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTEEVFESAHSIVFDEAENRMHTIKAVMVATLGD
>NZ_CP014667.1|WP_000397144.1|4839009_4840521_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP014667.1|WP_000584114.1|4840787_4841888_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP014667.1|WP_001295681.1|4841887_4842970_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP014667.1|WP_001294541.1|4843130_4844633_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPRLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGVQASTEQQNNPAVKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NZ_CP014667.1|WP_001298080.1|4844710_4845709_-|DNA-binding-transcriptional-regulator-IdnR
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSVHNYQTIIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVRHKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDLDGVFCTNDDIAMGALLLCRERKLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRTAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL
>NZ_CP014667.1|WP_001128336.1|4845775_4847095_-|gnt-II-system-L-idonate-transporter
MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH
>NZ_CP014667.1|WP_000998702.1|4847159_4847924_-|gluconate-5-dehydrogenase
MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVKKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV
>NZ_CP014667.1|WP_001197423.1|4847947_4848979_-|L-idonate-5-dehydrogenase
MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSKLHEGQTVAINPSKPCGHCKYCIEHNENQCTEMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLKGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF
>NZ_CP014667.1|WP_000896740.1|4849195_4849759_+|gluconokinase
MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQDDEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE
>NZ_CP014667.1|WP_001298045.1|4849762_4850782_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKTLAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	271-327	5	0.912
NZ_CP014667_2	2.2\|958605\|32\|NZ_CP014667\|CRISPRCasFinder	958605-958636	32	NC_015163	Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence	83332-83363	8	0.75
NZ_CP014667_4	4.2\|4349525\|56\|NZ_CP014667\|PILER-CR	4349525-4349580	56	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	13988-14043	9	0.839
NZ_CP014667_4	4.2\|4349525\|56\|NZ_CP014667\|PILER-CR	4349525-4349580	56	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87116-87171	11	0.804
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30155-30211	12	0.789
NZ_CP014667_6	6.1\|4838898\|52\|NZ_CP014667\|CRISPRCasFinder	4838898-4838949	52	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12113-12164	12	0.769
NZ_CP014667_6	6.1\|4838898\|52\|NZ_CP014667\|CRISPRCasFinder	4838898-4838949	52	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	272-323	12	0.769
NZ_CP014667_6	6.1\|4838898\|52\|NZ_CP014667\|CRISPRCasFinder	4838898-4838949	52	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31252-31303	12	0.769
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	43-99	13	0.772
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	42-98	13	0.772
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18328-18384	13	0.772
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	42-98	13	0.772
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	42-98	13	0.772
NZ_CP014667_6	6.1\|4838898\|52\|NZ_CP014667\|CRISPRCasFinder	4838898-4838949	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208982-209033	13	0.75
NZ_CP014667_6	6.1\|4838898\|52\|NZ_CP014667\|CRISPRCasFinder	4838898-4838949	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219476-219527	13	0.75
NZ_CP014667_6	6.1\|4838898\|52\|NZ_CP014667\|CRISPRCasFinder	4838898-4838949	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210310-210361	13	0.75
NZ_CP014667_6	6.1\|4838898\|52\|NZ_CP014667\|CRISPRCasFinder	4838898-4838949	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191265-191316	13	0.75
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87115-87171	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229227-229283	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229328-229384	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229429-229485	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4114-4170	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239721-239777	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239822-239878	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239923-239979	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4113-4169	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230633-230689	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230734-230790	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230835-230891	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4113-4169	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211603-211659	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211704-211760	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211805-211861	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4113-4169	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7392-7448	14	0.754
NZ_CP014667_5	5.1\|4410053\|57\|NZ_CP014667\|CRISPRCasFinder	4410053-4410109	57	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84216-84272	14	0.754
NZ_CP014667_4	4.1\|4349426\|63\|NZ_CP014667\|PILER-CR	4349426-4349488	63	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87115-87177	15	0.762

1. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 5, identity: 0.912

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac-aactattgccgacct	CRISPR spacer
atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaaccgttaccgact-	Protospacer
****************************************** ***..**.*****.

2. spacer 2.2|958605|32|NZ_CP014667|CRISPRCasFinder matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 8, identity: 0.75

ttgccgcggatcctgtctgccaataatgacaa	CRISPR spacer
ctggacggcatcctgtctgccaattttgacaa	Protospacer
.**    * ***************  ******

3. spacer 4.2|4349525|56|NZ_CP014667|PILER-CR matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.839

tacag-tgcccgatgcgacgctgccgcgtcttatcgggcctacaaa-agttctgaacc	CRISPR spacer
-acggatgcccgatgcgacgctggcgcgtcttatcgggcctacaaacggccccgaat-	Protospacer
 **.* ***************** ********************** .*..*.***.

4. spacer 4.2|4349525|56|NZ_CP014667|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.804

tacagtgcccgatgcgacgctgccgcgtcttatcgggcctacaaaagttctgaacc----	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatcaggcctacaaaa----tcaatcgctt	Protospacer
.**..****.************************.***********    * **.*

5. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 12, identity: 0.789

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa-ctattgccgacct	CRISPR spacer
tctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaatctgcacccgaac-	Protospacer
 ...****************** ************ ******** **..  **** *

6. spacer 6.1|4838898|52|NZ_CP014667|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 12, identity: 0.769

gtcttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc	CRISPR spacer
tcggtgcctgatgcgacgctggcgcgtcttatcaggcctacgagtcgcccgt	Protospacer
 .  ***************** *******.***************.   .*.

7. spacer 6.1|4838898|52|NZ_CP014667|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 12, identity: 0.769

gtcttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc-	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 .  *************************.***********.*. .*. *.*

8. spacer 6.1|4838898|52|NZ_CP014667|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.769

gtcttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc--	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 .  *************************.***********..  .*. ***

9. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***

10. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***

11. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***

12. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***

13. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.772

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatctgtacgcgaa--	Protospacer
....****************** ************ ********  **.*   ***

14. spacer 6.1|4838898|52|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gtcttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.

15. spacer 6.1|4838898|52|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gtcttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.

16. spacer 6.1|4838898|52|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gtcttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.

17. spacer 6.1|4838898|52|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gtcttgcctgatgcgacgctgtcgcgtctcatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******.***********    .** **.

18. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatcaggcctacaaaatcaatcgcttt	Protospacer
  *.******************.*********************   . ..** ..*

19. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

20. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

21. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

22. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**

23. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

24. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

25. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

26. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**

27. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

28. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

29. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

30. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**

31. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

32. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattctcgcgccac	Protospacer
.. .*****************. ********************* * .*  ** * .

33. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaactattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccat	Protospacer
.. .*****************. ********************* * ..  ** * *

34. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaa--ctattgccgacct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaacttgtgcctgaa--	Protospacer
.. .****************** ************ ********  .*.*  *.**

35. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac--aactattgccgacct	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaaactgcactcaac--	Protospacer
 . .****************** ************ ******  ****..  .*.**

36. spacer 5.1|4410053|57|NZ_CP014667|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 14, identity: 0.754

atcaatgcctgatgcgacgctgtcgcgtcttatcaggcctac--aactattgccgacct	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaaactgcactcaac--	Protospacer
 . .****************** ************ ******  ****..  .*.**

37. spacer 4.1|4349426|63|NZ_CP014667|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.762

ttggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctacattggtgccgga	CRISPR spacer
tcggtgcacgatgcctgatgcgacgctgccgcgtcttatcaggcctaca--------aaa	Protospacer
*.************************** ********************        ..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

253981 : 303321

Streptococcus_phage(22.22%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000224521.1\|253981_255328_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_001013430.1\|255330_255855_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000433567.1\|255851_257144_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_000896716.1\|257148_258198_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_000863399.1\|258161_260003_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_001189667.1\|260008_260434_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000111582.1\|260438_261923_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000041480.1\|261945_262449_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_001142963.1\|263154_263673_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000053624.1\|263893_265876_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.6e-23	25.3
WP_000571853.1\|265982_267029_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_000528851.1\|267021_268461_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_000513317.1\|268435_268726_+	hypothetical protein	NA	NA	NA	NA
WP_000227712.1\|269976_270480_+	hypothetical protein	NA	NA	NA	NA
WP_001298174.1\|270573_271062_+	integrating conjugative element protein	NA	NA	NA	NA
WP_001118042.1\|271332_272103_-	2-oxoglutaramate amidase	NA	NA	NA	NA
WP_000532690.1\|272256_272730_+	C-lysozyme inhibitor	NA	NA	NA	NA
WP_000973131.1\|272772_275217_-	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA
WP_000284050.1\|275456_276035_+	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
WP_001298195.1\|276239_277007_+	class II glutamine amidotransferase	NA	NA	NA	NA
WP_001225679.1\|276977_277718_-	murein L,D-transpeptidase	NA	NA	NA	NA
WP_000093934.1\|278029_278779_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	1.5e-19	37.7
WP_000006241.1\|278954_279452_+\|transposase	REP-associated tyrosine transposase RayT	NA	NA	NA	NA
WP_071778446.1\|279534_279744_-	hypothetical protein	NA	NA	NA	NA
WP_001298188.1\|279771_281511_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_000207578.1\|281455_282241_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
WP_001226168.1\|282311_283367_+	DNA polymerase IV	NA	NA	NA	NA
WP_000554758.1\|283418_283712_+	type I toxin-antitoxin system antitoxin YafN	NA	NA	NA	NA
WP_001263500.1\|283714_284113_+	type II toxin-antitoxin system mRNA interferase toxin YafO	NA	NA	NA	NA
WP_001059895.1\|284122_284575_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000521561.1\|284764_285904_+	RNA ligase RtcB family protein	A0A222ZMP7	Mycobacterium_phage	7.7e-31	31.8
WP_000602124.1\|285900_286515_+	peptide chain release factor H	NA	NA	NA	NA
WP_001292999.1\|286571_288029_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_001291991.1\|288289_288748_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_000189578.1\|288839_290084_+	esterase FrsA	NA	NA	NA	NA
WP_000174703.1\|290141_290543_+	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_000749900.1\|290581_291637_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.0e-117	60.6
WP_001285288.1\|291925_293029_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000893298.1\|293040_294294_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.8e-96	47.5
WP_001335540.1\|294794_295391_+	hypothetical protein	A0A1B0VBK8	Salmonella_phage	1.7e-98	88.4
WP_000258743.1\|295477_297115_-	hypothetical protein	NA	NA	NA	NA
WP_000266639.1\|297806_298034_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000120393.1\|298139_298367_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_000335706.1\|298615_300049_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_000282079.1\|301018_301582_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_089644009.1\|301789_303321_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.8e-44	35.0

DBSCAN-SWA_2

942279 : 950002

uncultured_Caudovirales_phage(50.0%)

integrase

attL 936266:936280|attR 948606:948620

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
936266:936280	attL	NA	NA	NA	NA
WP_000188148.1\|942279_944226_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.1e-37	40.1
WP_000410785.1\|944298_944523_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
WP_000085201.1\|944927_946166_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	2.0e-125	52.2
WP_001206970.1\|946575_946785_+	AlpA family phage regulatory protein	A0A2H4JB58	uncultured_Caudovirales_phage	2.2e-16	67.9
WP_000103622.1\|946923_947103_-	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	1.2e-10	58.6
WP_021527564.1\|947236_947434_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_000609226.1\|947426_947738_+	hypothetical protein	NA	NA	NA	NA
WP_000543626.1\|947730_947958_+	hypothetical protein	NA	NA	NA	NA
WP_000791981.1\|947963_948251_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000761778.1\|948247_950002_+	DNA primase	Q7M2A8	Enterobacteria_phage	2.2e-93	40.8
948606:948620	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1201165 : 1246367

Enterobacteria_phage(49.06%)

transposase,tRNA,lysis,tail,integrase,portal,capsid,terminase,head

attL 1204361:1204375|attR 1214875:1214889

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001298466.1\|1201165_1202272_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|1202325_1202787_-	phosphatase NudJ	NA	NA	NA	NA
WP_001248675.1\|1202796_1203450_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444487.1\|1203621_1204872_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
1204361:1204375	attL	NA	NA	NA	NA
WP_000741330.1\|1204985_1206128_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z02	Phage_21	3.1e-205	99.4
WP_000088653.1\|1206117_1206354_-	excisionase	NA	NA	NA	NA
WP_000488406.1\|1206493_1206733_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	3.9e-38	94.9
WP_000763364.1\|1206780_1206999_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	1.8e-34	95.8
WP_000188880.1\|1207097_1207313_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	2.9e-32	98.6
WP_000548537.1\|1207389_1207581_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
WP_000682300.1\|1207553_1207736_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	1.3e-28	98.3
WP_000186833.1\|1207732_1208413_-	YqaJ viral recombinase family protein	B6DZ61	Enterobacteria_phage	5.1e-131	98.2
WP_000100847.1\|1208409_1209195_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995491.1\|1209200_1209497_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	3.6e-49	99.0
WP_000233576.1\|1209571_1209778_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000866321.1\|1210253_1210631_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	1.3e-30	49.2
WP_000380252.1\|1210608_1211670_-	hypothetical protein	Q6SE88	Lactobacillus_prophage	2.9e-64	42.0
WP_001337214.1\|1211750_1212443_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.5e-109	86.1
WP_000184665.1\|1212553_1212781_+	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	3.8e-22	69.0
WP_001182882.1\|1212811_1213351_+	toxin YdaT domain-containing protein	M9NZI6	Enterobacteria_phage	8.9e-62	66.7
WP_000147913.1\|1213347_1214367_+	replication protein	A0A0M5M7Y1	Salmonella_phage	6.1e-112	64.7
WP_000788796.1\|1214363_1215077_+	hypothetical protein	G8C7U6	Escherichia_phage	9.8e-109	83.4
1214875:1214889	attR	NA	NA	NA	NA
WP_000608370.1\|1215155_1215584_-	hypothetical protein	NA	NA	NA	NA
WP_000182282.1\|1215580_1215958_-	hypothetical protein	NA	NA	NA	NA
WP_001053041.1\|1216225_1216681_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	7.0e-60	66.2
WP_000224917.1\|1216680_1216851_+	hypothetical protein	K7P7K0	Enterobacteria_phage	2.0e-12	67.9
WP_000774485.1\|1216843_1217134_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	9.6e-47	92.7
WP_001099712.1\|1217130_1217493_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	4.3e-60	96.5
WP_000971056.1\|1217489_1217630_+	YlcG family protein	K7PHH3	Enterobacteria_phage	1.1e-08	69.8
WP_001204776.1\|1217715_1218099_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	1.5e-55	83.3
WP_000737271.1\|1218287_1219370_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.6e-166	80.1
WP_000839596.1\|1219958_1220174_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001297096.1\|1220628_1221408_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	4.5e-139	99.6
WP_001298025.1\|1221407_1222430_-\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	6.0e-200	99.4
WP_001228695.1\|1222847_1223030_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001298464.1\|1223120_1223414_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	7.0e-45	92.8
WP_000830178.1\|1223894_1224221_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_000881607.1\|1224427_1224610_+	hypothetical protein	NA	NA	NA	NA
WP_000867508.1\|1225172_1225718_+\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	1.2e-79	82.9
WP_001027310.1\|1225692_1227618_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
WP_000198149.1\|1227614_1227821_+	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001298484.1\|1227817_1229419_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	3.5e-311	99.6
WP_000123275.1\|1229399_1230719_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.0e-231	97.9
WP_001298472.1\|1230728_1231061_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.4e-54	98.2
WP_000063225.1\|1231116_1232142_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	6.9e-188	97.1
WP_000158869.1\|1232183_1232579_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	5.7e-58	95.5
WP_000752960.1\|1232590_1232944_+\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	7.6e-62	99.1
WP_000985116.1\|1232955_1233534_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	7.8e-80	97.9
WP_000683140.1\|1233530_1233926_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	4.2e-69	97.7
WP_001298481.1\|1233933_1234674_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	2.6e-128	96.7
WP_000479168.1\|1234689_1235112_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.2e-69	95.0
WP_000459484.1\|1235093_1235528_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	5.0e-63	97.5
WP_000840199.1\|1235520_1238088_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	93.5
WP_000847330.1\|1238084_1238414_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	1.6e-58	100.0
WP_001152619.1\|1238413_1239112_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	7.3e-133	99.1
WP_001519691.1\|1239117_1239861_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.0e-149	97.6
WP_000090917.1\|1239797_1240430_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-97	100.0
WP_065089924.1\|1240490_1243973_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.3
WP_021518115.1\|1244031_1246092_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0E3M194	Enterobacteria_phage	5.7e-125	54.9
WP_000654175.1\|1246088_1246367_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	9.9e-25	57.6

DBSCAN-SWA_4

2672847 : 2854396

175

Escherichia_phage(24.55%)

transposase,tRNA,protease,tail,integrase,plate,holin,capsid,terminase,head

attL 2812705:2812722|attR 2854641:2854658

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000829343.1\|2672847_2674863_-\|tRNA	tRNA cytosine(34) acetyltransferase TmcA	NA	NA	NA	NA
WP_001267498.1\|2674877_2675741_-	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_001295467.1\|2675908_2676622_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FGF0	Synechococcus_phage	6.9e-38	36.1
WP_001296286.1\|2676834_2677869_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_001298451.1\|2677885_2678764_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_000176187.1\|2678909_2679482_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
WP_001068682.1\|2679481_2679952_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_000892033.1\|2680050_2681112_-	AI-2E family transporter	NA	NA	NA	NA
WP_000489655.1\|2681324_2682788_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
WP_000166449.1\|2682808_2683168_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_000247065.1\|2683305_2684052_-	DnaA inactivator Hda	NA	NA	NA	NA
WP_000198327.1\|2684101_2685391_-	uracil permease	Q9KX94	Enterobacteria_phage	8.6e-63	37.1
WP_001295473.1\|2685476_2686103_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_001296287.1\|2686427_2687465_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	1.8e-71	43.3
WP_001028626.1\|2687464_2688103_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	2.4e-29	42.9
WP_001296288.1\|2688274_2690341_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_001121350.1\|2690345_2691887_+	exopolyphosphatase	NA	NA	NA	NA
WP_065089939.1\|2691925_2694169_-	cyclic-guanylate-specific phosphodiesterase PdeF	NA	NA	NA	NA
WP_000017553.1\|2694350_2694503_-	hypothetical protein	G9L6F3	Escherichia_phage	4.9e-18	94.0
WP_000076001.1\|2694520_2694712_+	DUF2633 family protein	G9L6F2	Escherichia_phage	7.3e-27	100.0
WP_001311989.1\|2695022_2695541_+	glycine zipper 2TM domain-containing protein	G9L6F1	Escherichia_phage	2.9e-62	99.4
WP_000755178.1\|2695556_2696096_+	DUF5384 family protein	G9L6F0	Escherichia_phage	1.4e-43	98.9
WP_021573208.1\|2696314_2696797_-	DUF2514 domain-containing protein	A0A0F6TK39	Escherichia_coli_O157_typing_phage	3.2e-71	89.4
WP_001531861.1\|2696793_2697423_-	glycoside hydrolase family 19 protein	G9L6E8	Escherichia_phage	2.4e-114	97.6
WP_001546697.1\|2697412_2697721_-\|holin	phage holin family protein	G9L6E7	Escherichia_phage	1.2e-47	95.1
WP_065089940.1\|2697707_2698112_-	hypothetical protein	G9L6E6	Escherichia_phage	8.7e-62	94.0
WP_065089941.1\|2698341_2701098_-\|tail	tail fiber domain-containing protein	A0A0A0YWB2	Escherichia_phage	4.7e-74	65.0
WP_001188254.1\|2701293_2701551_+	hypothetical protein	A0A0F6R8M4	Escherichia_coli_O157_typing_phage	1.7e-42	98.8
WP_016236144.1\|2701866_2702577_+	hypothetical protein	G9L6E2	Escherichia_phage	1.8e-102	81.1
WP_000508164.1\|2702683_2702893_+	hypothetical protein	NA	NA	NA	NA
WP_065089942.1\|2702895_2703756_+	hypothetical protein	I6PD67	Cronobacter_phage	4.6e-36	35.2
WP_033546982.1\|2703781_2704285_+	hypothetical protein	NA	NA	NA	NA
WP_000643933.1\|2704401_2704962_-	hypothetical protein	NA	NA	NA	NA
WP_033546983.1\|2704964_2707514_-	hypothetical protein	W6MWW8	Pseudomonas_phage	6.9e-205	45.5
WP_045133331.1\|2707513_2709211_-	hypothetical protein	NA	NA	NA	NA
WP_065089943.1\|2709212_2711834_-	transglycosylase SLT domain-containing protein	A0A0F6R8M6	Escherichia_coli_O157_typing_phage	2.4e-72	38.7
WP_000332878.1\|2711833_2712379_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	9.8e-93	100.0
WP_065089944.1\|2712378_2712843_-	hypothetical protein	G9L6D1	Escherichia_phage	1.2e-83	98.1
WP_065089945.1\|2712842_2715314_-	hypothetical protein	G9L6D0	Escherichia_phage	0.0e+00	99.1
WP_000179260.1\|2715313_2715919_-	hypothetical protein	G9L6C9	Escherichia_phage	2.8e-112	100.0
WP_000424496.1\|2715918_2716242_-	hypothetical protein	A0A0F6R8M8	Escherichia_coli_O157_typing_phage	1.7e-52	97.2
WP_000012377.1\|2716292_2716628_-	hypothetical protein	G9L6C7	Escherichia_phage	7.7e-56	100.0
WP_000627084.1\|2716638_2717076_-	hypothetical protein	A0A0F6R7N9	Escherichia_coli_O157_typing_phage	7.7e-72	96.6
WP_065089946.1\|2717127_2718114_-	hypothetical protein	G9L6C5	Escherichia_phage	1.6e-186	99.4
WP_047089539.1\|2718128_2718824_-	peptidase	G9L6C4	Escherichia_phage	2.1e-92	97.8
WP_000133160.1\|2718826_2719123_-	hypothetical protein	G9L6C3	Escherichia_phage	1.3e-46	100.0
WP_033559459.1\|2719119_2720799_-\|tail	tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	4.0e-302	98.7
WP_000335899.1\|2720813_2721020_-	hypothetical protein	G9L6C1	Escherichia_phage	6.0e-11	100.0
WP_065089947.1\|2721723_2722095_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	4.5e-57	90.2
WP_065089948.1\|2722185_2723661_-\|terminase	terminase	A0A0F6TK57	Escherichia_coli_O157_typing_phage	2.4e-295	99.2
WP_065089949.1\|2723657_2724368_-\|terminase	terminase small subunit	Q287B7	Escherichia_phage	2.9e-105	84.7
WP_021537576.1\|2724408_2724747_-	hypothetical protein	A0A0F6TJR3	Escherichia_coli_O157_typing_phage	2.1e-53	91.1
WP_065089950.1\|2724861_2725503_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	5.6e-55	59.1
WP_000212745.1\|2725506_2725794_-	hypothetical protein	A0A1I9LJM1	Stx_converting_phage	3.5e-49	98.9
WP_065089951.1\|2725795_2726209_-	hypothetical protein	A0A0N7KZJ2	Stx2-converting_phage	9.0e-22	83.9
WP_065089952.1\|2726205_2726874_-	ead/Ea22-like family protein	K7P6T4	Enterobacteria_phage	5.2e-88	74.2
WP_065089953.1\|2726870_2727365_-	hypothetical protein	G9L6B1	Escherichia_phage	2.9e-27	47.3
WP_001231255.1\|2727426_2727771_-	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	4.1e-60	96.5
WP_001066741.1\|2727888_2728674_-	hypothetical protein	A0A0F6TJ71	Escherichia_coli_O157_typing_phage	3.6e-152	99.6
WP_065089954.1\|2728670_2729480_-	helix-turn-helix domain-containing protein	Q286X4	Escherichia_phage	1.6e-115	93.8
WP_000402896.1\|2729495_2729696_-	hypothetical protein	A0A0F6TJB7	Escherichia_coli_O157_typing_phage	1.0e-31	98.5
WP_001282459.1\|2729846_2730077_-	hypothetical protein	G9L6A7	Escherichia_phage	2.6e-39	100.0
WP_000836290.1\|2730231_2730816_+	helix-turn-helix transcriptional regulator	A0A0F6R8L7	Escherichia_coli_O157_typing_phage	7.0e-105	100.0
WP_001102254.1\|2731124_2731424_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	1.4e-45	98.0
WP_065089955.1\|2731420_2732242_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A2R9YJH7	Escherichia_phage	4.7e-163	99.6
WP_000063834.1\|2732238_2733180_+	recombinase RecT	A0A2R9YJJ1	Escherichia_phage	4.5e-178	100.0
WP_065089956.1\|2733229_2733478_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	8.8e-41	97.6
WP_001335975.1\|2733635_2733887_+	PerC family transcriptional regulator	G9L6A0	Escherichia_phage	3.1e-41	100.0
WP_000163459.1\|2733879_2734530_+	adenine methylase	G9L699	Escherichia_phage	2.5e-127	99.1
WP_001055436.1\|2734526_2735186_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	3.3e-103	79.5
WP_052934176.1\|2735188_2736445_-\|integrase	site-specific integrase	G9L697	Escherichia_phage	4.9e-236	99.3
WP_000138282.1\|2736637_2738215_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_001296289.1\|2738283_2739750_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.8e-88	38.9
WP_000937948.1\|2739911_2741288_+	exodeoxyribonuclease VII large subunit	A0A2H4UVM9	Bodo_saltans_virus	1.2e-41	35.3
WP_065089957.1\|2741356_2749408_-	RatA-like protein	NA	NA	NA	NA
WP_000806616.1\|2749528_2750506_-	hypothetical protein	NA	NA	NA	NA
WP_001298406.1\|2750560_2752738_-	intimin-like inverse autotransporter SinH	NA	NA	NA	NA
WP_001196894.1\|2752946_2753162_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_001296291.1\|2753224_2754697_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_001177062.1\|2754814_2755993_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA
WP_000409205.1\|2756003_2756624_-	ancillary SecYEG translocon subunit YfgM	NA	NA	NA	NA
WP_001107167.1\|2756641_2757916_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000551807.1\|2758026_2759145_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_001090835.1\|2759171_2760179_-	cytoskeleton protein RodZ	NA	NA	NA	NA
WP_000003317.1\|2760463_2761618_-\|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	NA	NA	NA	NA
WP_000963841.1\|2761767_2762199_-	nucleoside-diphosphate kinase	A0A167REB2	Powai_lake_megavirus	4.8e-18	37.9
WP_001137632.1\|2762347_2764660_-	peptidoglycan glycosyltransferase PbpC	NA	NA	NA	NA
WP_000736362.1\|2764660_2769622_-	alpha2-macroglobulin	NA	NA	NA	NA
WP_000108634.1\|2769828_2770674_+	3-mercaptopyruvate sulfurtransferase	NA	NA	NA	NA
WP_001298396.1\|2771166_2771943_-	enhanced serine sensitivity protein SseB	NA	NA	NA	NA
WP_000133524.1\|2772085_2773369_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	3.8e-34	37.8
WP_000523616.1\|2773427_2773628_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_001124471.1\|2773639_2773975_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_001196613.1\|2773976_2775827_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	5.5e-103	41.6
WP_000384413.1\|2775843_2776359_-	co-chaperone HscB	NA	NA	NA	NA
WP_000028953.1\|2776454_2776778_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	5.4e-22	48.6
WP_000331707.1\|2776794_2777181_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	1.4e-53	78.9
WP_001295373.1\|2777208_2778423_-	cysteine desulfurase	A0A1X7C038	Faustovirus	8.8e-33	31.8
WP_001241357.1\|2778534_2779023_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
WP_000940006.1\|2779292_2780033_-\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
WP_000553454.1\|2780151_2780955_+	inositol-1-monophosphatase	NA	NA	NA	NA
WP_001298397.1\|2781099_2781954_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000983031.1\|2782144_2783425_+	stationary phase inducible protein CsiE	NA	NA	NA	NA
WP_000244186.1\|2783416_2784556_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA
WP_001298395.1\|2784924_2785347_+	DoxX family protein	NA	NA	NA	NA
WP_099156434.1\|2785421_2786769_+\|transposase	IS3-like element IS1397 family transposase	A0A1B1P773	Bacillus_phage	1.3e-74	52.4
WP_065089958.1\|2786942_2787815_-	aldose 1-epimerase	NA	NA	NA	NA
WP_000700787.1\|2787826_2788921_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_001276657.1\|2788953_2789952_-	ABC transporter permease	NA	NA	NA	NA
WP_000493464.1\|2789976_2791488_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.0e-11	23.0
WP_001124927.1\|2791510_2792494_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_001298394.1\|2792590_2795872_-	DUF5107 domain-containing protein	NA	NA	NA	NA
WP_001298408.1\|2795989_2797183_+	ROK family protein	NA	NA	NA	NA
WP_000919159.1\|2797246_2798500_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.8e-101	52.7
WP_000883112.1\|2798828_2800019_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_000717694.1\|2800063_2800402_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
WP_001298400.1\|2800462_2801797_-	two-component system response regulator GlrR	W8CYM9	Bacillus_phage	3.9e-10	37.3
WP_001215878.1\|2801786_2802500_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
WP_001297612.1\|2802664_2804092_-	two component system sensor histidine kinase QseE/GlrK	W8CYF6	Bacillus_phage	3.0e-16	24.9
WP_001298398.1\|2804667_2808555_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	2.2e-130	59.4
WP_000734193.1\|2808812_2810369_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
WP_001298403.1\|2810365_2810902_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
WP_000190644.1\|2810926_2811562_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_001298401.1\|2811770_2812619_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
2812705:2812722	attL	NA	NA	NA	NA
WP_040091219.1\|2813262_2813910_+	hypothetical protein	NA	NA	NA	NA
WP_000904983.1\|2813990_2814545_-	site-specific DNA recombinase	A0A1S6L009	Salmonella_phage	2.8e-87	87.3
WP_077626228.1\|2814571_2814973_+\|tail	phage tail protein	F1BUP1	Erwinia_phage	5.9e-10	37.7
WP_000376436.1\|2814976_2815396_+\|tail	tail assembly chaperone	A0A0F7LDZ0	Escherichia_phage	1.7e-36	55.8
WP_000805534.1\|2815367_2815961_-\|tail	tail fiber assembly protein	Q9MCR5	Enterobacteria_phage	1.1e-60	64.9
WP_065089959.1\|2815960_2816755_-\|tail	phage tail protein	K7PH60	Enterobacterial_phage	3.3e-81	94.2
WP_000049950.1\|2816754_2817435_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	2.6e-103	78.8
WP_040091350.1\|2817431_2818631_-\|plate	baseplate J/gp47 family protein	A0A0M4RD32	Salmonella_phage	1.3e-185	83.9
WP_001270634.1\|2818630_2818984_-	hypothetical protein	A0A0M4R339	Salmonella_phage	3.1e-55	90.6
WP_040091349.1\|2818983_2819736_-	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	2.4e-89	66.7
WP_021527589.1\|2820510_2820864_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	1.3e-29	84.0
WP_040091347.1\|2820863_2821931_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	1.7e-157	82.2
WP_000155118.1\|2821933_2822236_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	1.8e-48	91.0
WP_001349561.1\|2822235_2822823_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	3.1e-84	89.1
WP_040091345.1\|2822822_2824811_-	lytic transglycosylase	A0A0M4REK7	Salmonella_phage	1.8e-269	73.8
WP_040091344.1\|2824988_2825441_-	bacteriophage protein	A0A0M4S6U8	Salmonella_phage	6.1e-56	72.7
WP_000109255.1\|2825444_2825885_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	1.6e-56	74.7
WP_000046924.1\|2825895_2827041_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.8e-160	73.8
WP_033544654.1\|2827044_2827608_-	hypothetical protein	A0A0M4R331	Salmonella_phage	3.4e-80	76.3
WP_040091341.1\|2827582_2827972_-\|head,tail	head-tail adaptor	A0A0M3ULK0	Salmonella_phage	4.3e-66	95.3
WP_040091340.1\|2827958_2828513_-	hypothetical protein	A0A0M4S631	Salmonella_phage	3.0e-81	84.8
WP_040091339.1\|2828509_2828917_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	6.7e-70	95.6
WP_040091337.1\|2828882_2829251_-	hypothetical protein	A0A0M4RTX5	Salmonella_phage	2.6e-52	86.1
WP_040091336.1\|2829291_2830233_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	3.7e-156	87.2
WP_032330425.1\|2830244_2830748_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	1.6e-73	82.6
WP_040091335.1\|2830752_2831973_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.9e-181	82.2
WP_086070094.1\|2831987_2832725_-\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	1.3e-108	95.5
WP_040091332.1\|2832612_2834079_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.3e-267	93.9
WP_021563489.1\|2834078_2835701_-	hypothetical protein	A0A0M5M1R6	Salmonella_phage	6.0e-312	95.2
WP_000162796.1\|2835703_2836276_-\|terminase	terminase small subunit	A0A2H4J480	uncultured_Caudovirales_phage	1.4e-60	69.6
WP_000779569.1\|2836337_2836862_-	hypothetical protein	K7P6W1	Enterobacteria_phage	4.5e-42	66.9
WP_065089960.1\|2836845_2837322_-	glycoside hydrolase family protein	Q8SBE0	Shigella_phage	1.3e-85	95.6
WP_000781776.1\|2837325_2837667_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	2.8e-53	91.9
WP_021529146.1\|2838070_2838505_-	hypothetical protein	B6SD39	Bacteriophage	4.8e-42	62.1
WP_024234090.1\|2838786_2840979_-	replication protein	B6SCY1	Bacteriophage	1.2e-173	71.3
WP_000170998.1\|2840982_2841195_-	helix-turn-helix transcriptional regulator	A0A0R6PHL1	Moraxella_phage	7.9e-06	42.9
WP_000049986.1\|2841315_2841939_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	3.3e-36	44.8
WP_000801672.1\|2842572_2842722_+	hypothetical protein	NA	NA	NA	NA
WP_000051350.1\|2842718_2843621_+	hypothetical protein	Q3LZP9	Bacteriophage	6.1e-07	54.4
WP_024234091.1\|2843623_2844925_+	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	4.0e-132	55.7
WP_000769011.1\|2844940_2845489_+	DUF2815 family protein	Q775A5	Bordetella_phage	1.6e-66	65.9
WP_001683173.1\|2845600_2847082_+	SIR2 family protein	Q38324	Lactococcus_phage	7.9e-36	30.8
WP_024428386.1\|2847155_2849234_+	DNA polymerase	Q775A3	Bordetella_phage	2.4e-272	67.1
WP_024234094.1\|2849290_2850049_+	nucleotide-binding protein	NA	NA	NA	NA
WP_021563493.1\|2850114_2850336_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_021544533.1\|2850325_2850607_+	VRR-NUC domain-containing protein	Q3LZN4	Bacteriophage	9.7e-28	65.5
WP_021544534.1\|2850607_2850751_-	hypothetical protein	NA	NA	NA	NA
WP_021544535.1\|2850750_2851371_-	hypothetical protein	NA	NA	NA	NA
WP_024234150.1\|2851413_2852805_+	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	1.9e-212	73.7
WP_001291430.1\|2852801_2853002_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001138341.1\|2852998_2854396_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
2854641:2854658	attR	NA	NA	NA	NA

DBSCAN-SWA_5

4129146 : 4140708

Enterobacteria_phage(88.89%)

integrase

attL 4128964:4128986|attR 4139598:4139620

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4128964:4128986	attL	NA	NA	NA	NA
WP_001218974.1\|4129146_4130334_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.5e-207	91.2
WP_000281857.1\|4130380_4130908_-	hypothetical protein	NA	NA	NA	NA
WP_001335488.1\|4130914_4132000_-	hypothetical protein	NA	NA	NA	NA
WP_000446153.1\|4132296_4132869_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	5.0e-95	96.8
WP_000638629.1\|4132942_4133443_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_001279711.1\|4133439_4134174_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-126	96.3
WP_001149160.1\|4134726_4134993_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	4.9e-45	100.0
WP_000980256.1\|4134989_4135580_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	2.0e-59	89.6
WP_001244665.1\|4135572_4135860_+	hypothetical protein	Q7M2A0	Enterobacteria_phage	8.6e-48	97.9
WP_000459296.1\|4135852_4136308_+	hypothetical protein	Q7M298	Enterobacteria_phage	1.6e-64	99.1
WP_000856729.1\|4136443_4136764_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_000783690.1\|4136778_4139112_+	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	99.0
WP_065089978.1\|4139670_4140708_+	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	2.2e-72	43.3
4139598:4139620	attR	NA	NA	NA	NA

DBSCAN-SWA_6

5040663 : 5081585

Enterobacteria_phage(50.0%)

lysis,protease,tail,integrase,portal,holin,terminase

attL 5040414:5040433|attR 5085538:5085557

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5040414:5040433	attL	NA	NA	NA	NA
WP_001218287.1\|5040663_5041878_+\|integrase	site-specific integrase	A0A291AWU1	Escherichia_phage	1.6e-236	99.3
WP_000653746.1\|5042253_5043249_-	hypothetical protein	NA	NA	NA	NA
WP_000206728.1\|5043816_5044437_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	1.2e-118	95.6
WP_001242728.1\|5044436_5044799_-	hypothetical protein	U5P092	Shigella_phage	1.3e-64	95.8
WP_000008232.1\|5044789_5045326_-	5'-deoxynucleotidase	S5MW55	Escherichia_phage	7.4e-101	100.0
WP_000081256.1\|5045453_5046278_-	DUF2303 family protein	U5P439	Shigella_phage	6.6e-149	99.3
WP_000135680.1\|5046343_5046706_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_000500990.1\|5047174_5047687_+	hypothetical protein	NA	NA	NA	NA
WP_001298691.1\|5048002_5048695_-	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	7.3e-125	99.1
WP_001191672.1\|5048792_5049053_+	helix-turn-helix transcriptional regulator	S5FKP1	Shigella_phage	9.3e-41	98.8
WP_000515840.1\|5049045_5049597_+	hypothetical protein	K7PGU3	Enterobacteria_phage	1.1e-99	97.8
WP_001087311.1\|5049593_5050430_+	ash family protein	Q8SBF3	Shigella_phage	1.1e-138	92.4
WP_000933943.1\|5050422_5050659_+	hypothetical protein	A0A291AX25	Escherichia_phage	2.7e-39	98.7
WP_000061519.1\|5050655_5051474_+	helix-turn-helix domain-containing protein	A0A291AWW0	Escherichia_phage	4.7e-123	99.6
WP_001315196.1\|5051470_5051965_+	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	8.1e-86	97.5
WP_000066917.1\|5051964_5052618_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_000210180.1\|5052614_5052941_+	LexA family transcriptional regulator	K7PLX6	Enterobacteria_phage	2.0e-53	99.1
WP_000767113.1\|5052937_5053327_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_001061422.1\|5053346_5054189_+	KilA-N domain-containing protein	S5MC03	Escherichia_phage	5.7e-140	91.8
WP_001540821.1\|5054196_5055186_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	8.1e-194	99.1
WP_001205460.1\|5055203_5055545_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.2e-57	90.3
WP_001131905.1\|5055557_5056106_-	hypothetical protein	NA	NA	NA	NA
WP_000868396.1\|5056092_5057019_-	hypothetical protein	NA	NA	NA	NA
WP_000917727.1\|5057283_5057487_+	hypothetical protein	A0A291AWX6	Escherichia_phage	3.0e-31	98.5
WP_000799673.1\|5057637_5058690_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.6e-206	98.9
WP_001120490.1\|5058766_5059093_+\|holin	phage holin, lambda family	U5P0K7	Shigella_phage	2.6e-56	98.1
WP_001197768.1\|5059096_5059573_+	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	2.5e-84	95.6
WP_001298489.1\|5059569_5060013_+\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	1.5e-70	93.9
WP_000084843.1\|5060051_5060426_+	hypothetical protein	M1FPD9	Enterobacteria_phage	2.5e-55	87.9
WP_001205132.1\|5060524_5060707_-	hypothetical protein	NA	NA	NA	NA
WP_000373423.1\|5061064_5061559_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	3.8e-83	99.4
WP_000934116.1\|5061558_5063661_+\|terminase	phage terminase large subunit family protein	K7PH40	Enterobacteria_phage	0.0e+00	99.6
WP_001072975.1\|5063657_5063870_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_072134767.1\|5063797_5065378_+\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	2.1e-289	99.8
WP_001136583.1\|5065322_5067350_+\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.5
WP_001097050.1\|5067436_5067760_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_001283153.1\|5067752_5068028_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_000677099.1\|5068039_5068618_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	2.1e-101	99.5
WP_001298485.1\|5068614_5069016_+\|tail	tail protein	A5LH34	Enterobacteria_phage	1.6e-71	98.5
WP_000211128.1\|5069026_5069770_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	1.6e-130	98.0
WP_001298500.1\|5069830_5070217_+\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	3.3e-66	100.0
WP_001161009.1\|5070225_5070555_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_000372054.1\|5070526_5073592_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	98.8
WP_000447254.1\|5073591_5073921_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	5.1e-60	99.1
WP_001152410.1\|5073930_5074629_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	1.9e-133	99.1
WP_000194752.1\|5074634_5075378_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.2e-151	98.8
WP_032143682.1\|5075275_5075923_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	3.0e-112	97.7
WP_021518114.1\|5075983_5079466_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.5
WP_021518115.1\|5079524_5081585_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0E3M194	Enterobacteria_phage	5.7e-125	54.9
5085538:5085557	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP014668

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3303 : 48562

Escherichia_phage(31.25%)

integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067837.1\|3303_4008_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	5.8e-138	99.1
WP_077459403.1\|4037_4265_+	DsbA family protein	NA	NA	NA	NA
WP_000949451.1\|4254_4761_+	protein disulfide oxidoreductase	NA	NA	NA	NA
WP_012372823.1\|4943_5759_+	Na(+)-translocating NADH-quinone reductase subunit C	NA	NA	NA	NA
WP_001332815.1\|6105_7992_+	FTR1 family iron permease	NA	NA	NA	NA
WP_000178050.1\|8032_8560_+	iron transporter	NA	NA	NA	NA
WP_000119836.1\|8663_10043_+	DUF2318 domain-containing protein	NA	NA	NA	NA
WP_000964653.1\|10045_11329_+	ABC transporter permease	NA	NA	NA	NA
WP_000729218.1\|11318_12449_+	ABC transporter permease	NA	NA	NA	NA
WP_000117262.1\|12453_13149_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-29	38.9
WP_001267176.1\|13135_13621_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_000874189.1\|13645_14131_+	hypothetical protein	NA	NA	NA	NA
WP_001189113.1\|18066_19575_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
WP_000839179.1\|20076_20481_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
WP_000612626.1\|20477_20825_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_001310017.1\|21904_22927_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	3.2e-201	99.7
WP_065089989.1\|22926_23706_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.0e-138	99.6
WP_000977394.1\|24444_25236_-	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_001298664.1\|25242_27213_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_001322642.1\|28455_28728_+	adhesin biosynthesis transcription regulatory family protein	NA	NA	NA	NA
WP_001072358.1\|29574_30744_-	hypothetical protein	NA	NA	NA	NA
WP_001332784.1\|31110_31299_+	hypothetical protein	NA	NA	NA	NA
WP_001066947.1\|31419_32160_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.6e-24	57.6
WP_001309253.1\|32402_33380_-	replication initiation protein	J9Q7H0	Salmonella_phage	6.1e-101	59.5
WP_000990667.1\|34554_35196_-	hypothetical protein	NA	NA	NA	NA
WP_000813634.1\|37517_37736_+	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_001159871.1\|37737_38043_+	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_000016979.1\|38043_38853_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	7.8e-54	95.5
WP_000239529.1\|38990_39266_-	hypothetical protein	NA	NA	NA	NA
WP_000633911.1\|39259_39904_-	AAA family ATPase	A0A222YXS3	Escherichia_phage	8.8e-40	43.5
WP_001103694.1\|40132_41104_+	hypothetical protein	A0A222YXF2	Escherichia_phage	9.7e-67	42.9
WP_000340835.1\|41108_41501_+	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_000109079.1\|42775_43213_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.1e-25	47.6
WP_000619112.1\|43209_43458_-	DinI-like family protein	Q2A098	Sodalis_phage	1.2e-13	48.0
WP_000115885.1\|43592_44111_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_000343766.1\|44129_45350_+\|transposase	ISL3-like element ISEc53 family transposase	NA	NA	NA	NA
WP_001298676.1\|45768_46599_+	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_000544830.1\|46592_47390_-	IS21-like element IS21 family helper ATPase IstB	U5N3V8	Enterobacteria_phage	1.9e-145	99.6
WP_000952372.1\|47389_48562_-\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	3.5e-228	99.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014669

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP014667

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP014668

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection