CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015398	Lactobacillus brevis strain NPS-QW-145 chromosome, complete genome	3 crisprs	csn2,cas2,cas1,cas9,csa3,cas3,DEDDh,DinG	0	13	4	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015398_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015398_1

79605-80762

TypeII

Consensus_repeat	Method
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	PILER-CR
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CRISPRCasFinder
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CRT

17 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP015398_1

>merge|NZ_CP015398|1|79605-80762|PILER-CR,CRISPRCasFinder,CRT
GTTCTTGATCCTATTGATTTACCAAGATTCTAAAGCAACGCGTTGCTGATCGTCCTTGAGAATTGAGTTCTTAACCATATTGATTTACCAAGATTCTAAAGCATACGTCAGTTCCTTATTCATAGAGTCCAGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCCGACTACGACGTTTCACCAAAGATTGTGATGTTCTTAACCATATTGATTTACCAAGATTCTAAAGCCCGTGTCAGGATCAATCGAATCGTGTTGCCGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCACCACCCCTCACAGCTTTTACCACAGCGGTGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCCTTTAATCTCTAGTCCCTGACCATCTTTTCGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCAGGCGATTGCGATCGAACTTCAACGAATGAATTCTTAACCCTGTTGATTTACCAAGATTCTAAAGCTAAAAAGCAAGGAATTTCGATCCAGGAACAGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCGACGGCGGGTAAGTTTGTTGCCGACGACGCGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCAGTTAAAGAACTCGTATCTGCCATTTTTACGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCTCTGCCGGCGAACTACCTGGTATTCGTACAGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCGAGGTGAGCAGGGAGTCGTGGCAATGCGCCGGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCGGGTCATGAATTCACTCAAGCTGAATTAGAGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCCTGTTCCCATCAAGTGGCGATCAGTCCGGAGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCAAACTTGCACCAGCATTTATCTTTGATGTTGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCGGCAGTTACTGGATTACTAGAACTCATTTTGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGCTAGCCTTATAGTCCAATACCTCTTTCGGTGGTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC

>NZ_CP015398|1|1|79605-80762|PILER-CR
GTTCTTGATCCTATTGATTTACCAAGATTCTAAAGC	AACGCGTTGCTGATCGTCCTTGAGAATTGA
GTTCTTAACCATATTGATTTACCAAGATTCTAAAGC	ATACGTCAGTTCCTTATTCATAGAGTCCA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CGACTACGACGTTTCACCAAAGATTGTGAT
GTTCTTAACCATATTGATTTACCAAGATTCTAAAGC	CCGTGTCAGGATCAATCGAATCGTGTTGCC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	ACCACCCCTCACAGCTTTTACCACAGCGGT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CTTTAATCTCTAGTCCCTGACCATCTTTTC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AGGCGATTGCGATCGAACTTCAACGAATGA
ATTCTTAACCCTGTTGATTTACCAAGATTCTAAAGC	TAAAAAGCAAGGAATTTCGATCCAGGAACA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GACGGCGGGTAAGTTTGTTGCCGACGACGC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AGTTAAAGAACTCGTATCTGCCATTTTTAC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	TCTGCCGGCGAACTACCTGGTATTCGTACA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GAGGTGAGCAGGGAGTCGTGGCAATGCGCCG
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GGGTCATGAATTCACTCAAGCTGAATTAGA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CTGTTCCCATCAAGTGGCGATCAGTCCGGA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AAACTTGCACCAGCATTTATCTTTGATGTT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GGCAGTTACTGGATTACTAGAACTCATTTT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	TAGCCTTATAGTCCAATACCTCTTTCGGTG
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC

>NZ_CP015398|1|1|79605-80762|CRISPRCasFinder
GTTCTTGATCCTATTGATTTACCAAGATTCTAAAGC	AACGCGTTGCTGATCGTCCTTGAGAATTGA
GTTCTTAACCATATTGATTTACCAAGATTCTAAAGC	ATACGTCAGTTCCTTATTCATAGAGTCCA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CGACTACGACGTTTCACCAAAGATTGTGAT
GTTCTTAACCATATTGATTTACCAAGATTCTAAAGC	CCGTGTCAGGATCAATCGAATCGTGTTGCC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	ACCACCCCTCACAGCTTTTACCACAGCGGT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CTTTAATCTCTAGTCCCTGACCATCTTTTC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AGGCGATTGCGATCGAACTTCAACGAATGA
ATTCTTAACCCTGTTGATTTACCAAGATTCTAAAGC	TAAAAAGCAAGGAATTTCGATCCAGGAACA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GACGGCGGGTAAGTTTGTTGCCGACGACGC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AGTTAAAGAACTCGTATCTGCCATTTTTAC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	TCTGCCGGCGAACTACCTGGTATTCGTACA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GAGGTGAGCAGGGAGTCGTGGCAATGCGCCG
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GGGTCATGAATTCACTCAAGCTGAATTAGA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CTGTTCCCATCAAGTGGCGATCAGTCCGGA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AAACTTGCACCAGCATTTATCTTTGATGTT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GGCAGTTACTGGATTACTAGAACTCATTTT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	TAGCCTTATAGTCCAATACCTCTTTCGGTG
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC

>NZ_CP015398|1|1|79605-80762|CRT
GTTCTTGATCCTATTGATTTACCAAGATTCTAAAGC	AACGCGTTGCTGATCGTCCTTGAGAATTGA
GTTCTTAACCATATTGATTTACCAAGATTCTAAAGC	ATACGTCAGTTCCTTATTCATAGAGTCCA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CGACTACGACGTTTCACCAAAGATTGTGAT
GTTCTTAACCATATTGATTTACCAAGATTCTAAAGC	CCGTGTCAGGATCAATCGAATCGTGTTGCC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	ACCACCCCTCACAGCTTTTACCACAGCGGT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CTTTAATCTCTAGTCCCTGACCATCTTTTC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AGGCGATTGCGATCGAACTTCAACGAATGA
ATTCTTAACCCTGTTGATTTACCAAGATTCTAAAGC	TAAAAAGCAAGGAATTTCGATCCAGGAACA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GACGGCGGGTAAGTTTGTTGCCGACGACGC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AGTTAAAGAACTCGTATCTGCCATTTTTAC
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	TCTGCCGGCGAACTACCTGGTATTCGTACA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GAGGTGAGCAGGGAGTCGTGGCAATGCGCCG
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GGGTCATGAATTCACTCAAGCTGAATTAGA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	CTGTTCCCATCAAGTGGCGATCAGTCCGGA
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	AAACTTGCACCAGCATTTATCTTTGATGTT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	GGCAGTTACTGGATTACTAGAACTCATTTT
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC	TAGCCTTATAGTCCAATACCTCTTTCGGTG
GTTCTTAACCCTATTGATTTACCAAGATTCTAAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015398.1\|WP_021741248.1\|71000_71315_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP015398.1\|WP_065200952.1\|81458_81764_-\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP015398.1\|WP_065200947.1\|69252_70362_-\|glycerol-dehydrogenase	unknown	unknown	gnl\|CDD\|181843
NZ_CP015398.1\|WP_065200948.1\|71319_71850_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP015398.1\|WP_011668738.1\|68762_69185_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015398.1\|WP_065200951.1\|80796_81462_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP015398.1\|WP_065200959.1\|93157_94831_+\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|200472
NZ_CP015398.1\|WP_065200956.1\|89321_89852_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015398.1\|WP_065200949.1\|73017_73584_-\|SdpI-family-protein	unknown	unknown	gnl\|CDD\|379303
NZ_CP015398.1\|WP_065200957.1\|89838_90327_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015398.1\|WP_021741833.1\|76440_77493_-\|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|369561
NZ_CP015398.1\|WP_021741246.1\|71923_72757_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP015398.1\|WP_065200953.1\|81741_82647_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP015398.1\|WP_065200958.1\|90561_91560_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP015398.1\|WP_021741834.1\|77555_78935_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340890
NZ_CP015398.1\|WP_035464753.1\|91754_93137_+\|SLC45-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340871
NZ_CP015398.1\|WP_065200954.1\|82856_86963_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_CP015398.1\|WP_035464278.1\|70672_70999_+\|multidrug-resistance-protein-SMR	unknown	unknown	gnl\|CDD\|224987
NZ_CP015398.1\|WP_081277013.1\|74197_76435_-\|glycoside-hydrolase-family-65-protein	unknown	unknown	gnl\|CDD\|224471
NZ_CP015398.1\|WP_065200955.1\|87488_89132_+\|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173869

Protein	Function_ID	Function_description	E-value
NZ_CP015398.1\|WP_021741248.1\|71000_71315_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	4.18465e-25
NZ_CP015398.1\|WP_065200952.1\|81458_81764_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.90838e-22
NZ_CP015398.1\|WP_065200947.1\|69252_70362_-\|glycerol-dehydrogenase	gnl\|CDD\|181843	PRK09423, gldA, glycerol dehydrogenase; Provisional.	0
NZ_CP015398.1\|WP_065200948.1\|71319_71850_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	5.20192e-17
NZ_CP015398.1\|WP_035464753.1\|91754_93137_+\|SLC45-family-MFS-transporter	gnl\|CDD\|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.21066e-118
NZ_CP015398.1\|WP_065200951.1\|80796_81462_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.48437e-62
NZ_CP015398.1\|WP_065200959.1\|93157_94831_+\|alpha-glucosidase	gnl\|CDD\|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP015398.1\|WP_065200949.1\|73017_73584_-\|SdpI-family-protein	gnl\|CDD\|379303	pfam13630, SdpI, SdpI/YfhL protein family. This family of proteins includes the SdpI and YfhL proteins from B. subtilis. The SdpI protein is a multipass integral membrane protein that protects toxin-producing cells from being killed. Killing is mediated by the exported toxic protein SdpC an extracellular protein that induces the synthesis of an immunity protein.	3.48534e-08
NZ_CP015398.1\|WP_021741833.1\|76440_77493_-\|alpha/beta-hydrolase-fold-domain-containing-protein	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	8.51777e-35
NZ_CP015398.1\|WP_021741246.1\|71923_72757_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	8.25045e-35
NZ_CP015398.1\|WP_065200953.1\|81741_82647_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.36342e-92
NZ_CP015398.1\|WP_065200958.1\|90561_91560_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.12578e-88
NZ_CP015398.1\|WP_021741834.1\|77555_78935_-\|MFS-transporter	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.18157e-106
NZ_CP015398.1\|WP_065200954.1\|82856_86963_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	1.10307e-132
NZ_CP015398.1\|WP_035464278.1\|70672_70999_+\|multidrug-resistance-protein-SMR	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.56889e-21
NZ_CP015398.1\|WP_081277013.1\|74197_76435_-\|glycoside-hydrolase-family-65-protein	gnl\|CDD\|224471	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism].	1.12166e-147
NZ_CP015398.1\|WP_065200955.1\|87488_89132_+\|peptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173869	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding component of an ATP-binding cassette (ABC)-type oligopeptide transport system comprised of 5 subunits. The transport system OppABCDEF contains two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0

>NZ_CP015398.1|WP_021741834.1|77555_78935_-|MFS-transporter
MSKMQLWKQRFFYGATDMAGNLIWQIVGLYLLFYYTTVMGISPAFAGTLFFVVRIIDAFDGVVYGFLIDHTHSKFGKARPYFLWFGIPLGILTMLLFFNPSFGGNKVIQLAWVSVVYTLFSLVYSGANTPITAILPSLTKDPDERTNLASARMVMTNIGTAVIGAITLPMVAQLGGKNAEKGWMIWGVIIGIAIIALFLGAFANLREKDDIVAETEDAPEIKGHLSVKDSLKGAAKNKPWLILSASFILLQTFWMMRLQTAVYYLTYVSHQPALVGAFNGLVIVAVIGNVSVPFLSKFMKHRNVMILAMMTFAFGELLMAFKNIPLLFIGNVIALVAMGAAFSIAFVMIADTVEYSRSELHIDEPGILSAVPMVGAKLGMGLAGLISGWLLSWGGFNAAAKVQGAKAVTAIATNFIWVPVVLALVIGGILYLWYQLDESKIASAKAAKEAEKKLSEEDA
>NZ_CP015398.1|WP_021741833.1|76440_77493_-|alpha/beta-hydrolase-fold-domain-containing-protein
MLNDTTTKQSLGYSDELRRLQGIGVTDIADGVTSWVKERDPLHTFEPLVWETVAGIEANPQLPTDLFSLRQGTETSGQRDLTTTAMKVEMQQIVAMNRRVRVIRIAREDHLNADKAYIYFHGGAYYGGTPEDVLLALKFVAEQANCVVYNVDYALAPEQPYPAGILDGLAVVAAMTAEYAHISLGGDSAGASIALGVSQLCKSMGICEIASHVLFYPTVIQGSELPGPLWDDNQITIVSEQRAALHRSYQLFEQLDAIMSGYYVADQAVDLTAPLLSPLLADPTTFHNVTLLVGEYDPFRLQGEAFIKRVGHANGDANYFRYGGISHAFLNFTGNVPAVEDALMTAAKFI
>NZ_CP015398.1|WP_081277013.1|74197_76435_-|glycoside-hydrolase-family-65-protein
MQIRQLGEIMLTLQDYHLTLHDVANHQPAYLETVFSLANGHFGVRANDPITGNPIAGTLINGFYETAPITYGEAGVGYAKAHQTILNLPDFRHINVATTTGHSFTSSERTKVDLDLATGELTEHYTLQTRQGETIAMSVQSVIGQTQTAFWAVNYGFLAGNYAGGLMVNKTIAVPAEVESLPSADPRKTRLAGLPICETTFMAKDLQQYHVKTRQTKQSVTIYLGMLTTPGSLLRQPVDLSDHTTHHLSYEVYVGEMGQQNTIDPALPFPATALTALMTDSRDFWQDVWQRSEVTVGGNDELDLAIHYNLFQLNQAAGRDGRTNIAAKGLSGSGYEGHYFWDTEMYMLPYFIYTNQPMARQLLVYRYQTLPQARQRARALGVDQGALFAWRTINGEEASAYFPAGTAQYHIDADIAYAVGKYYEITRDIDFIKQCGFEMILETAHFWEVFGSWHQVGTSQRFEFHTVTGPDEYTALVNNNYYTNRLAKHNFELVTYLAQEILKVDPNGLTKFGIDATDIDAFQNLAEHVYLPYSAEQQINAQDDSFLSKPRWPVAQSTPENFPLLLHYHPLTIYRYQVAKQADTLLADYLFPEDLSPEQLQREYHYYEGVTTHDSSLSRSIFSILAARMGDVEKGYRYFMDTAQMDLVNLQKNTADGLHLANLGGSWLALVAGFSGFYVQDEVVHFTNHLPSELTQLTYRMKIAESVLEIKLTATETTVVVISGPIPTYGVSVNGQLISLAKKVR
>NZ_CP015398.1|WP_065200949.1|73017_73584_-|SdpI-family-protein
MLLPDVALSKERVILLVNSVILALAWVRYLFLPKTRPSFGVLGAFTLVYVALLLLQIMVNGRHRGLKFSLDLNVVFGSYCLILVLLPLAYANTAIVDHLTGAGIIVSLIGVPLSYVPRNRLYSIRIPATKSSPAVWQKTNHLAARICFGFGGLSFLLGLLGQAAFVLTMAVGAVVLVVGTSIYARKLS
>NZ_CP015398.1|WP_021741246.1|71923_72757_-|histidine-phosphatase-family-protein
MKLTKVVSLLAVTAGALTLVAVPSNAQAKTKKKAAVKPVTIYLTRHGETTGNVMGRVQGWSDFPLTSNGIAVANNLGRGLKGKTFKVAYAGNLTRQQVTAKQALKYSGNKKVKVNVSKYLREGGYGSFEGDSIAADNALIAGVYGFKSGDEMMAKQGKDYWNLLQDAYYKLDQENSQKTNLVASDRAESSKQVQKRMAKELLTIAKATQKRGGGNALVVSSGMSINEYLSTMAGSKYTGAPLKNAAVTKLVYKHGKLAVSGPIGSMTYVDKGAKLAK
>NZ_CP015398.1|WP_065200948.1|71319_71850_-|GNAT-family-N-acetyltransferase
MAVRLKPLASEEVAAFWQLAFRDPQAAWTQWNGPYFHDHVPTYAEFVTGPGHEAYVDRPWRQVIWVDDQMVGMVFAYYDDAPLNRWLDVGISIYDQHRWQRGIGRTALSQWIDWLWTQTPLPHIGLTTWSGNQRMCHLAESLGLREEARVRQVRYWQGRYWDSVKYGVLREEWYKR
>NZ_CP015398.1|WP_021741248.1|71000_71315_+|multidrug-efflux-SMR-transporter
MAWLFLIGAGLSEMLGVTFMNWALHRKTWWLWVLMILAFTLSFGGLELALKTLPMGTAYAIWTGIGAAGGVLTGMLFFGESKDWRKLVWVAVILSATLGLKLIS
>NZ_CP015398.1|WP_035464278.1|70672_70999_+|multidrug-resistance-protein-SMR
MWKHWLTVVLGAVFEVSWVVGFKHATTLWAWLITGVAVYLSFYFLIRASRSIPAGTAYAVFVGLGTLGTTSVGMFVFGEPVSWLKIALILLLLAGIGGLQWTTTKEAN
>NZ_CP015398.1|WP_065200947.1|69252_70362_-|glycerol-dehydrogenase
MTQMFGSPASYVQGKDVLFDSIAYLEKFGHKALLMADSVVYQIIGDRFRAYLDDHHIEVHKVIFRGEASPEEIDRITGIGREFGADVIIGLGGGKTLDSAKAIADNLQLPVAILPSLASTDAPCSRLSVIYHADGSFKEYRFYDKNPDLVLVDTRLVAGAPARLLASGIADALATNVEAQAVAKGDNATMLGAKQTLVGNAIAQKCEDTLFAYGHLALESVKQHAVTPALNKIVEANTLMSGVGFESGGLAAAHAIHDGLTALDGPIHELTHGEKVAYGTLTQLFLEGRSEAEFDRYLAFDLSLGLPTTLADLKIPDVTDEDLLKVGQQATAPADTMDRMPFKVTPDDVAQAMRGVDAYSRAYQARHAK
>NZ_CP015398.1|WP_011668738.1|68762_69185_+|hypothetical-protein
MQRKYRDYFAYLKTINPDPNASFIAVSPANVQKTDPDKFATLTARAGRRWGVILFHALYGNKTTKKTNVPYAVVHEDSFARDWDGIDRAEFDEDVAILVQCHMLQVKEVQGLTRLIMRYPEPLASLADLRIKGIDQINPG
>NZ_CP015398.1|WP_065200951.1|80796_81462_-|type-II-A-CRISPR-associated-protein-Csn2
MNLTYYGFRPFKITPGKVVVLATGSPHIYQEIILGLQDRTDTVKLSDDNFTTVTVEKSAQWYGDPLLNVDLNALFQRKLQIRLLKVLADEQTVGLVDGLQSLLSQLLEDSYLMDVPLELPETPELAKLIKFSGIQLVPDLRDDVYGILETLVKTLIELNDHRMVVLTNVGHYLQVSQLQSLVRFMANIDLPILLIEFSSTKQSDYFRNCDYHYIDSDFVLW
>NZ_CP015398.1|WP_065200952.1|81458_81764_-|CRISPR-associated-endonuclease-Cas2
MRLMIMFDLPMETSQDRRHYRHFRKALLQEGFFMMQYSVYVRVCPNSAGAAAIEKRIAALAPANGLVQSVMLTEKQYQAMHFIAGQPNQDLLNSAERTVMI
>NZ_CP015398.1|WP_065200953.1|81741_82647_-|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTLLISQHAKISLTSGNLVIQTDSDRYHTPIRDINVLLIQSLQVVITTAAVAALAEAHAKIIFTGRDGQPICETAECYPHARTAALVRQQVGWSEGRIENLWTRIVAAKIQNQIAVGNLLEVSTMDLSSELEKLELNDATNREAVVARQYFPLIFGKDFSRSDLVPINAALNYGYSILLSLVNRIIVSRGYLTCFGIHHDNAGNAFNLASDLMEPFRPIIDYWVAQQKILDLTPDVKFGLARLFELEMRYNGKQEVLSNVVEKVVVQCLKYLSEETETIRIEVDVPDEVSNYAINDYV
>NZ_CP015398.1|WP_065200954.1|82856_86963_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTSGVEERLIKLGGVIAVDKEPYGIGLDIGTSSIGWSVVDMNGRIKRVKGQTGLGVRLFEEGQAAAERRGYRTTRRRLSRRRWRLRLLREIFDEPISAIDASFFARQKASNVSPKDTKFVTTYRLFSDQSDGEFYEEYPTIYHLRQALMTEHRQFDLREIYLAIHHIVKYRGNFLRSGNPQKFQPGKLDFNERFTRINQAWLGVFDELAPQLPEEDLEDVTAIILDTTRSRLDRQRDLVKQLMKMTGNQKSWKPVLTAFCKAILGLKAQVYLVLGLDVAKEDQKSLTFSLADIEDHRDDLAALMDEKQTALLEKLVDLQAAIQLTEIMPDGKGFSESMVQSYVNHKEHLCWLKEYATVQTDEQRRTKVLLAYDHYIDGNDKGKAETTGDFYNELRRLLKGDTSELAQKMMNAIELEKFMPKQRTKGNGVIPYQVHQQELDAIIENQKDYYPFLAAPNPVVEDRREQPYKLDELVHFRVPYYVGPMITAEEQAKTAAGQFAWMVRKEPGDITVWNFDKKVDRVASATNFIARMKTTDTYLIGEDVLPLQSLIYQRFMVLNELNGIRVNGERLRRDQKQRLYNQVFKTRRTVSIKAIQENLVNHGDVDKRPVIEGLADPKNFNSSLSTYQDLKAILPTAVDDPKRQVDIEKIVNWSTVFEDQRIFKDKLQEIGWLTDTQRNRLSAKRYRGWGRLSARLLTEIQDAQGQSIMDQLWQTQHTFMQIVHEPDYAAAITAINAAGFKDQTLETTIDELYTSPQNKKALRQIVAVVRDIQAARHGQIPSRIFIEAARGAMDNPQRTRRRQKQLTDLFADRAKEIVSQTVTEELKDQIADKAKFTDRLLLYFLQNGRDMYTGEKLNIDRLSQYDIDHILPQSLIKDDSLDNRVLVQQRINRDKNDSFAADLYASKMQGTWELWHSAGLVSARKLRHLLMRADEINKYATGFVNRQLVETRQVIKLTTDVLSSLYDPEKTQLISVKAALSHQLRTELKLPKLRELNDYHHALDAYLAARIGTYLLKRYPKLERFFVYGQYKVAPQLDLRRFNFIHDLVSDKQVIDPDTGELLWDREADIKYLEHLNGLKHLLVTHEVFEDHGALFDQTIYPAREDQRKKLIPTKRGRDTATYGGYSGRKTAYLAIVKVHDKGDYLKVMAVPISAVTEMNQQRKLGLAAEKAYLKKLFLPQFTKKSGAIDFEVVRPHVYLHQRIEDEVYGEVHQFALGTNTYYRNLQQLWLPLSSQQLLLRKDAKDEELTRVYDQICEQAQRYFSLYERNNFRQALQNNRDRFIALPATNVVDDRGKLVQVGKREIISRLMRGLHADASFGDLKAIDIKTPFGFLQSGRGIRLNVESKMIMESPTGLFKREVRIDPES
>NZ_CP015398.1|WP_065200955.1|87488_89132_+|peptide-ABC-transporter-substrate-binding-protein
MQRKGTILTVAALSLLTLAGCGSQSSSSNNSGKYAAKQVLNWTESSELATTDLAQATDTLSFNVLQNTQEGLYRLNSKGTPAKALATSTKVTNGGKTYTFNLRHGVKWSNGDPVTAKDFVYSWQRTVSPKTASQDAFYLYQVKNAEAVNKGKKSLSALGIKATGKYTLTVNLTKPVSYFKKLLAWPLFYPVNQNAVNKYGKKYGTSSSTTVYNGPYRLTKWNGTSKSWTLAKNKTYWDKKAVHLTKINEQVTESTTTSYNLYNAKKVDETLLSGQQIKNNKNSKDFVKRLPTGSQRLDLNEKKVSAFKNVNIRKALSLAINRTQLVNDVLQDGSVASKGFVPAGMGNNPKTGEAFNQEASVKSAVSYNVKQAKTLLAKGLKQTGDKKLNVTLSVSDTDSSKQTAEFIQSSLEKLPNVTVTIKTVPYVQLITQQNNGNYELTLAGWQSVFADPINFLDVFEADSSYNTTGWKNSTYDKLLDEAENVYGNQPEKRWGKLVAAEQVLMKNQGTIPLYQAAKSQLLRSNVKSVVYNPAGVPYDWKTTYIAK
>NZ_CP015398.1|WP_065200956.1|89321_89852_-|hypothetical-protein
MSYIKRSGDTMKKGLKGIVLAAASLGMFAMASSTTANAASKTTLPKSYRGTWYIYGGSDTEDKVTAYAVAKLNLTNKKMGYKVYTTTKKQLTSLKWQLSAAFPTTYSKKVNNKKKVTYRVKARIDDSETLMTLGKTKVNVKVLGKKVTALRLRADGTNVYAFRKPLRTHALSDITY
>NZ_CP015398.1|WP_065200957.1|89838_90327_-|hypothetical-protein
MRKQLLVGVITGLAAFTLAGMGHETAQAATLPADYQGDWVAYVGKTKHHHVNYYYTARLTLADTSLATQLNVTKNANLSDLTTQVTLQSAVTYQLKTTKKHQVSYKVRTATDNASLGKFSLTKVKVKGQKTTALAFDDGEDDVVYAFRSLNKTHAWGDDVLY
>NZ_CP015398.1|WP_065200958.1|90561_91560_-|LacI-family-DNA-binding-transcriptional-regulator
MAATIKDIAKLAGVSPATVSRVLANKTAFFSADTAAKVQTAATTLGYQKNTAAAELVTQQSHVIAAIVNSTKTNFANHIIEGIQDAAYRQGLNVIILYAGDADPEQQRRALTTVIERPVRGILLLSVDLSADNLTYLQAAQIPYCFLSISFEEDQLPFITSDDWQVGYQGTQALLAQGHRQIGLAAVDSVHAHTGKLRLAGYTQALTEAGITPDPAWIQPGDYSYVAGQAAMRAYGQAPQVTAVLAGSDMAAIGVLNQARDFGLTVPHDLSIMAIDGTELCELVQPQLSSVSQSFYDMGVAGVEQLTTAQQQPPKITPITVVTRESVRFIES
>NZ_CP015398.1|WP_035464753.1|91754_93137_+|SLC45-family-MFS-transporter
MAQTTPIESTDATPAATSHNALPKISLKTIFAMTFGFFGVNMAFSLQSSQMGRIFQTIGADPTKLGFFFLLPPLAGMIVQPLVGKYSDMTWNRFGRRMPYLLIGAPIAALVMILLPNAGSFGFGYASLAALWFGAVAILFMDLSSNVCMQPFKMIIGDMVNEDQKDLAWSWQQSFSNLGGVLATIFPFVLTWFGVSNVAPKGTVPMSVRLAFYIGAGILLLTSLYTIISVKEYDPETYNRYHHVKTQAKQKTASLWHLVKTAPRAFWEVSFVQLFDWFAFQYLWTYGTGAIAANVWHTADASSAGYQAAGNWFGILSCIQALAAVVWGFAVLSRTKPAQRKLWFRISLIMGGAGFIWIFFIHSQYLLILPFCLIGICYLTMQTQALSLFTESLNGENEGAYLGLFNCGICLPQIIASLLSFAIFPAIGQSMPGMLVIAGVALLLGAVAVSVIHPKLSANL
>NZ_CP015398.1|WP_065200959.1|93157_94831_+|alpha-glucosidase
MTKKWWQNAVVYQVYPRSYQDSNGDGIGDLAGLAQRLPYIKRLGADVIWLNPIYKSPDKDNGYDISDYQSIQPAYGTMADFDHLLDSAHRQGLKLLMDLVVNHTSDQHDWFQQSRQSKDNPYADYYIWRDPVDGHEPNNWGSYFSGSAWTFEPKRNQYYLHLFAPGQPDLNWENPQVRQEVWNLMRFWLDKGVDGFRMDVINLISKPAGLPDAPQAPGAAYGDSQPIVSDGPKLNDYLREMNDEVLSHYDVMTVGEMPGSTPKDAITYTGLNANELNMVFQFEHVGLSPNPDARLGKWNAVPVKLTELKDSLSRWQTALDGKGWNSLYWNNHDQPRAVSRFGNDTPEFRERSAKMLATTLHMMQGTPYVYEGEELGMTNAHYTQLDQYEDLESLNAYHELVDDQHIVDQPTMLKYLSHISRDNARTPMHWDDSTNAGFTTGQPWFALNPNYPTINAADQLDQDDSVFNYYRRLIALRHSSDLIVLGSYEELDPEDDQVFAYKRHYQGQTLIVMSNFTDQTVTRDYGQAEASERLIGNYADDQGTTLRPYETKVYVFK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP015398_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015398_2

391217-391302

Orphan

I-E,II-B

Consensus_repeat	Method
GTATTCCCCACATGTGTGGGGGTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015398_2

>merge|NZ_CP015398|2|391217-391302|CRISPRCasFinder
GTATTCCCCACATGTGTGGGGGTGATCCTAAGTCAGTGCTTAAGCCTATCCATTATGCAGCGTATTCCCCACATGTGTGGGGGTGA

>NZ_CP015398|2|2|391217-391302|CRISPRCasFinder
GTATTCCCCACATGTGTGGGGGTGA	TCCTAAGTCAGTGCTTAAGCCTATCCATTATGCAGC
GTATTCCCCACATGTGTGGGGGTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015398.1\|WP_065201063.1\|381291_381603_+\|DUF2316-family-protein	unknown	unknown	gnl\|CDD\|370809
NZ_CP015398.1\|WP_024525964.1\|388110_389598_-\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_CP015398.1\|WP_021742824.1\|398716_399331_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|225462
NZ_CP015398.1\|WP_024525965.1\|386247_387933_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371095
NZ_CP015398.1\|WP_065201761.1\|381890_382211_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015398.1\|WP_024525966.1\|385726_386164_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225064
NZ_CP015398.1\|WP_024525968.1\|383626_385069_-\|NADP-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236453
NZ_CP015398.1\|WP_065201066.1\|399434_400904_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
NZ_CP015398.1\|WP_042522038.1\|393808_394651_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381314
NZ_CP015398.1\|WP_024525967.1\|385213_385642_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP015398.1\|WP_039106911.1\|395956_397123_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP015398.1\|WP_024525962.1\|397280_398627_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340903
NZ_CP015398.1\|WP_065201067.1\|401068_401728_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP015398.1\|WP_065201068.1\|401876_402623_-\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380322
NZ_CP015398.1\|WP_021741894.1\|391634_392210_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP015398.1\|WP_065201064.1\|381617_381866_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015398.1\|WP_024525970.1\|382343_382607_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015398.1\|WP_024525963.1\|390058_390880_+\|AAC(3)-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|376807
NZ_CP015398.1\|WP_021741891.1\|394890_395706_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235640
NZ_CP015398.1\|WP_065201065.1\|392279_393707_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143451

Protein	Function_ID	Function_description	E-value
NZ_CP015398.1\|WP_065201063.1\|381291_381603_+\|DUF2316-family-protein	gnl\|CDD\|370809	pfam10078, DUF2316, Uncharacterized protein conserved in bacteria (DUF2316). Members of this family of hypothetical bacterial proteins have no known function.	4.01786e-43
NZ_CP015398.1\|WP_024525964.1\|388110_389598_-\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_CP015398.1\|WP_024525965.1\|386247_387933_-\|hypothetical-protein	gnl\|CDD\|371095	pfam10500, SR-25, Nuclear RNA-splicing-associated protein. SR-25, otherwise known as ADP-ribosylation factor-like factor 6-interacting protein 4, is expressed in virtually all tissues. At the N-terminus there is a repeat of serine-arginine (SR repeat), and towards the middle of the protein there are clusters of both serines and of basic amino acids. The presence of many nuclear localization signals strongly implies that this is a nuclear protein that may contribute to RNA splicing. SR-25 is also implicated, along with heat-shock-protein-27, as a mediator in the Rac1 (GTPase ras-related C3 botulinum toxin substrate 1) signalling pathway.	0.00300428
NZ_CP015398.1\|WP_021741894.1\|391634_392210_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.98151e-10
NZ_CP015398.1\|WP_024525966.1\|385726_386164_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	6.52447e-34
NZ_CP015398.1\|WP_024525968.1\|383626_385069_-\|NADP-dependent-phosphogluconate-dehydrogenase	gnl\|CDD\|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP015398.1\|WP_065201066.1\|399434_400904_-\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.64937e-55
NZ_CP015398.1\|WP_024525967.1\|385213_385642_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	5.18279e-15
NZ_CP015398.1\|WP_039106911.1\|395956_397123_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.18185e-64
NZ_CP015398.1\|WP_024525962.1\|397280_398627_+\|MFS-transporter	gnl\|CDD\|340903	cd17345, MFS_GlpT, Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters. Glycerol-3-Phosphate Transporter (also called GlpT or G-3-P permease) is responsible for glycerol-3-phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The GlpT group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.09754e-142
NZ_CP015398.1\|WP_065201067.1\|401068_401728_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	5.07249e-09
NZ_CP015398.1\|WP_065201068.1\|401876_402623_-\|nitroreductase-family-protein	gnl\|CDD\|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	1.34046e-78
NZ_CP015398.1\|WP_021742824.1\|398716_399331_-\|NAD(P)H-binding-protein	gnl\|CDD\|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	1.5499e-53
NZ_CP015398.1\|WP_042522038.1\|393808_394651_-\|aldo/keto-reductase	gnl\|CDD\|381314	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR). Xylella fastidiosa phenylacetaldehyde dehydrogenase is a founding member of aldo-keto reductase family 13 member B1 (AKR13B1). phenylacetaldehyde dehydrogenase (EC 1.2.1.39) catalyzes the NAD+-dependent oxidation of phenylactealdehyde to phenylacetic acid.	2.06137e-134
NZ_CP015398.1\|WP_024525963.1\|390058_390880_+\|AAC(3)-family-N-acetyltransferase	gnl\|CDD\|376807	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase. This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.	2.94263e-82
NZ_CP015398.1\|WP_021741891.1\|394890_395706_+\|hypothetical-protein	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	0.00230747
NZ_CP015398.1\|WP_065201065.1\|392279_393707_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143451	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.	0

>NZ_CP015398.1|WP_024525963.1|390058_390880_+|AAC(3)-family-N-acetyltransferase
MTNWQEREITRVTTAIDLYDLFDRLGLRATDSCLVHTSLSAFGYIPGGEQTLVTALKTTLSQGNIVMPAQSADYTDPREWLYPPVRQDLQAKVMAGMPAYDRTLTPCHFIGITPEYFRTLPDTQRSGHPTCSMTAWGRNAAQICATPTLDLPFGAQGPLQKLYDLNAKVVCLGTDFETATAIHLAESTIGRPVFEEQAPISVAGKPQWRSYQMVELEPYDDFNVMGAAFCQAHPEQVVQQPLGQHHQARAIGMRTLVDFAREYYREKDRREMS
>NZ_CP015398.1|WP_024525964.1|388110_389598_-|glucose-6-phosphate-dehydrogenase
MATERTALFMFFGGTGDLAYRKLYPSLFNLYRKGNLRTHFAVIGTSRQSIDDDKFRAAVKKSLADSGNRADSKEASDFISHFYYQSHDVTDTAHYSVLKELAEKLDKKYKLQGNRIFYLSMAPQFFGTIAQDLKTQGLMSTDKDAFNRLVIEKPFGRDFDSAKQLNDALSKSFEEEQIFRIDHYLGKEMIQNIEALRFGNTLVESLWNNRYIDNIQVTLSEKLGVEERASYYDNSGALRDMVQNHIMQIVSLLAMEQPVAFTDTDIRAEKVKALRSLRVYNVADAATNFVRGQYGSVNDQPDYRHEDNVPVDSTTETFVAGKLLFDNYRWSGTPFYVRTGKMLADKFTRVDVVFKRPLVDIFAFPQSQNTPLAANVLTIFVEPHAGFSLQLNAKTNDTGFQTEPIKLDYIVGAEKSKDTPEPYERLIHDVLKGDGTNFSSWPEVSYAWKFVDQIRRVWDLQEPNFPNYTPHSMGPAAAEELIQRDHREWIYRLNN
>NZ_CP015398.1|WP_024525965.1|386247_387933_-|hypothetical-protein
MTFSPLNVPILLLSTSLLTLTLANVQPVTAHATATSVSLAEKTTTSTATAQLFTSPVNQPLTLTADTYPLYNDEGQETTDTLPGKQQLTTTKILVDPLAGTTYYRVQENPDRFIKYDATTVNLKHTLTLNFSDPDGSTIKGPLMFRMTQGNDFEAIASDLKDQYAAVIDGYVFNRTTVDTANPYNTQFNSFYDKAGGSSADESHASIPSSPLPSLSTLTNEKIRLTSPNDYSLYDNGGNNLTTGKTTVAGNSYYSATGLYLFHQDSTNADNVFYQISPDAFIKGDDTTALTSPITFKYETSDGQSIKTDSMLDTGLVTGDDLNNLIKELQTWQPTIDGYTYQSVNPTADTLTFKYTPTSASSSSDTSSSTSSSSQTSSSTSTDSTASSDTHNSVVTSASSTRPDKSIVPKGAAVTAIRKIGVYRDVQFTKQNRRHWYQRQPQTKRPQFVVTGYARTKAGTLRYQIRDVNHHSATDGQRGYITANSKFVMPTYYQAAPKRIKVISPHGVNAYRQINLTQKKRHYRVGTTITVKAIKSYHLTTRLVLSNGTYVTANKILVAKK
>NZ_CP015398.1|WP_024525966.1|385726_386164_+|GNAT-family-N-acetyltransferase
MEWQAKSFDELSREEFFDIAYERIRTFVMAQHRPYQEIDATDKVARHILGYQAGQLVAYARVFREAGHVTFGRVLTIPEQRGTGHGRQLMVQIEAEIRRNFAGEAISIEAQIDKQHFYEKFGYAAIGAVFDFNGTPHIRMDKAGL
>NZ_CP015398.1|WP_024525967.1|385213_385642_-|winged-helix-turn-helix-transcriptional-regulator
MPNAFRSIGLIARATAAMGNQLFQADDLNNNQFIFLMRIVETPGITQAELATQLHVDPSTCLRAVRKLIATQYVTRGTDAHDKKRRPLLATAKGQAMYPALEDYEQQILSVGTQGLSTGETALLEELLAKVARNVRDYQNQH
>NZ_CP015398.1|WP_024525968.1|383626_385069_-|NADP-dependent-phosphogluconate-dehydrogenase
MADQKANIGVVGMAVMGKNLALNIESRGYTVGIYNRSANKTEQVMKDHSEKKLVPSYTVEDFVKSLETPRRILLMVKAGKPTDAVIHELLPLLDKGDVLIDGGNTNFHDTMARNAELDKSGINFIGMGVSGGELGALQGPSLMPGGQKEAYDLVAPILEKIAAKAPQDGKPCVTYIGPNGAGHYVKMVHNGIEYGDEELIDESYNIMRNVAGISVDDMADIFKEWNKGELDSYLIEITADILTRKDDLGDDKNLPIVDAIKDRGNNKGTGKWSSEDALDVQVPQSVITESVYARYISMLKDERVKASKVLPAAEKQGKADIADKDKFVEEVRQALFFGKLMSYAQGFEQLRFASEANDWDLKFGELAQIWRGGCIIRAQFLQNITDAFDKDPKLSNLLFDDYFKDIAGKYQQSIRDVVAMAVQAGIPVPSLSAAITYYDSFRAEVLPANLLQAQRDYFGAHTYERNDREGNFHYSWYEEQ
>NZ_CP015398.1|WP_024525970.1|382343_382607_+|hypothetical-protein
MTENVVLAPPEALELAKHLDEWAKWRQTHDRTTADMDWDQFIAKSREKAQWQAGLATEIDHWESLHAIQLALTDNLMGTAHGGHTRQ
>NZ_CP015398.1|WP_065201761.1|381890_382211_+|hypothetical-protein
MMVNGTLAQIESYRRLLYRVEKRTTDWKISQMTSINENDDLRPVIAGQDLHINPQDLVGLRPSYQFLAYVRQAAGGKISANLLGTDRPADVDQLYAEAENWLRQTK
>NZ_CP015398.1|WP_065201064.1|381617_381866_+|hypothetical-protein
MSRGEDIAEISELVARERLFRARHNPAIADCYYPDATVATSWQQGPLSTFLNAESTEVDPRFAIVGNNSGAVVHLNGRRAYV
>NZ_CP015398.1|WP_065201063.1|381291_381603_+|DUF2316-family-protein
MSLNAQQLAATRQELHANFILTGLTKEQVAADLQISLTKLDHLFTLTQQSLNDPWILRNYLLERVAATGQAPVPFSALSGDWHRHWFLDSEVIDRREMSAGDR
>NZ_CP015398.1|WP_021741894.1|391634_392210_+|TetR/AcrR-family-transcriptional-regulator
MREKDTAKQTSIIDEVSNIILNEGIAAVSMSKIAKASGISSSTIYVYFTDKEDVLKQVYLAKKEMLATFLLKNIEATTDNPVIFAQQFMRALYEFGMQHYEALMIIEQFNSSPVRNNLQISQAESYRGFERLFEATSHAPQFVTDSAAVILGFAYAPIVLYVKARKTNQLAAQTISIEQVIDMCMHALLKE
>NZ_CP015398.1|WP_065201065.1|392279_393707_+|aldehyde-dehydrogenase-family-protein
MTTNVEMTKIFEDQRQQYNRAQPMSLATRLATLDQLERLLRENLNAFVEALQADFGQRDPLQIIGADLTGPLTTIAYTRKHLRKWMKPDKKRLGLMGLSGSREYVYNEPLGVVGIMSPFNAPIDLALDPAIEAIAAGNRVMVKISEYTPKAAALLQRLAKKYVSETTFAVITGAADVSANFSALNWDKFVFTGGSETGKKILAAAAPNLTPVVLELGGKNPAVVLPDANQQLAAEKIARGRSGNSGQICLDVDYAMVPANQLTDYIHLIVEQLEQAFPTYSDNPEYSAIINDAAYKRITGMLAEAQQRRTQLLTINPNHDAVPDATKRLIPLTLAINPDPDLQIAKNEIFGPILSIFTYETLDEAIAFINTHEKSLAMYVFGKNKAQLDRVIRHTSSGGVDINELALHAGSHEMGFGGVGYSGMGRYKGGKVGFETFSNPKSVYKQGILAKYTTRFMVPIHNQRNEKRFKKMLGL
>NZ_CP015398.1|WP_042522038.1|393808_394651_-|aldo/keto-reductase
MEKTFTFDSDLTVNRLGYGTMQLTGDGVWGPVADPDNAVKVIETAIDHGVNFIDTADAYGPFYANLYLRDALKNRPDNHVMVATKVGNTRQGPDVWTPVGVPAYLRQQVEMNLFTLGLDHIDLLQLHRVDPNVPLADQIGVLKDMQDEGKIKHIGLSQVSVDQLKEATAIAPIVSVQNMYNLSNRQDEDVLDYADAHHIAFIPWFPLATGELIKDATLTNIAQKYSASPAQIALAWLLKRSDVILPIPGTKSSDHELQNIQAQDIDLSQADFDALKALAK
>NZ_CP015398.1|WP_021741891.1|394890_395706_+|hypothetical-protein
MKKFMVALTGLVTLATVGATVPATAVTTAHAATKSTYVSPSLKVNAIYTTSTKVAGTATKGSKITVKATKNAKTNLASGTASKTTGKYSIKLSKKLKKNANVYVYATNSKTKAYFYRIIRVQAASTKAATTKSTSTKKTTTKKTTTKKSTTSSKTSAASFSVKTPTGTWTSNTANKYSQKWVFSQKTGLNEYLYKNGKKVKTLVSYAKYSVSAKTPTFWKITYTPKGSKTKQTMYLRFTSAKKFKVVNSKNQVISTKAGVAPAAKWAFTKA
>NZ_CP015398.1|WP_039106911.1|395956_397123_+|MFS-transporter
MWKTKKEVSLVGILSATLLLNAAAACMWPLTTVYMHNQLHQTLALAGVALLGMSLCMIVGNWLGGWLFDNWSPFKSALVGTLCSFIPMLTLIVFHGWPIFGIMLLFIGLGDGIVMTVVNSFAANIKEISSRRVFNWLYIGMNLGVVVGTLMVGVLMDHGVQLVFMVASLSYAALLVIFVVDFRMDIQTKTHQHVKGPAKPAQLQLIWLIAAMVFCLYLSYSLWESVISVHMTNLGISFEKYSLLWTLNGLLIVFGQPLANRIGTYFKMSSQIAVGTLIFILSFLLLVFARDYTMFVVTMVILTVGEMTGFPGIPAWIDGLAGDNDKGKFQGIYNMAISFGRAVGPLYGGLIIEYGSYQLLFWSVTGLMLAALAAVMLRNHHNLTRVKK
>NZ_CP015398.1|WP_024525962.1|397280_398627_+|MFS-transporter
MFSFLKPAPDAKVKVPAEKVVGTYRLRQTGVLLSICIGYIGYYIIRLIFTTEQNDIMKAYGFTTADIGLVMSCFGIGYGISKLFMGALSDKSNPKWYLATGLFISAILNFGLGSTRNLYVMMLLMLVMSVAQGMGAAACQRTVQLWWGKKWRGTVYAVWSSAHNAGAFACVAVVQIATLMFTHSIAAVFYTASVVSIVIAIFIVLAGADRPATVGLPSIGEYTGDEVVLDDGQATRAELTDLSLWQIFVRYILTNKVVWAITLTSMSLYLVRYGIMSWIPSYLTQFKGFDPGTAKWLVGIFELAAVPGVILMGAISDLLKDRRAIVCIGCVIGLLICLTTYFFSTSHLAIIIVLLIMGSLIYAPLTLVGLMVNESVPKFAVGSSTGFMGFFQYIFGETLATALIGILVAKFGWIASNTVLYTAAGLALLLLCYIAIHEHHVAKIAAGE
>NZ_CP015398.1|WP_021742824.1|398716_399331_-|NAD(P)H-binding-protein
MKLAIIGATGKTGNAVLEVARTRKITVTAVVRNAAKLTEPVSVIEKDIFALTPADLQGFDVVICAFASSKKSDYPRVNQHLVEILTGTDTRLIVVGSGATLFTDETRQKTVGDELPLIMRNSSRKHLQARQILQASRLNWTYMAPPMNYVPDGNATGSYQVGHDVLLYDRHGDSTISYADMALALVDEVEHPQNERQLMTVAWK
>NZ_CP015398.1|WP_065201066.1|399434_400904_-|MFS-transporter
MTETRRRIITFGLLLANIMAGFEGTIISTAMPTIVADLHGLSLMNWGFTIYFLFNAIGTPIWGRVADIIGRKRSFLFGTAIFVIGSLLEGLATNMIWLIIARGIMGIGAGGMLAIPFIIFSEIYPVDQRASVFGFTAAFGGISAVCGPLLGGWIIDVLNWHWVFFINIPIGIISILIVYFAFREKSEERHAKIDVWGSLSLSIVILAFLLGVQLIGQSHTPVIWAIAFLLIAIVFGFLFVRIERNTHDPLIPLHLFKNKDMLLWDLMAFVGMGFYISFSVYIPMWAQGILLTSALAGGATQIPTAGLWYSGSRFGSYLSKKRNHHLTAVLALSFALIGTLVLLALGMTPNYAFFIIVGALLGIALGMLLTTSQVGVSEAVTSNDLAVATTLNRLFNTLGQTIMTAIYGLVFNIVVNHQATKLGLPSAKISGLTNSAVTSDSKAQLLIMHHVLFAGIKSVLIVAFVLLLVALILETGNIYLTRIKKQSVQ
>NZ_CP015398.1|WP_065201067.1|401068_401728_+|TetR/AcrR-family-transcriptional-regulator
MATENERRQQMIRRITQTIVQNGFADLKMEKIAKLMGVSRTKMYQYYSSKTAIMTDVVARYLEFMATRSVPQSVDAKTSVTNFPQVILNLANLIASSSQKFRRDLAQADEELSEQFEESYASWCHQVRDFLTNGVTNGAFNSSLQPELFLIQMEATVAALMQPRVLTQHKVVTQNVLREYLQMIITQVVAPKYRAQINLDAVEPDLEHLTLKYQQTLTK
>NZ_CP015398.1|WP_065201068.1|401876_402623_-|nitroreductase-family-protein
MNPTLTTLFNHRSIRQFTPEKLTTDEVATLITAAQHAATSTFSQQYSVISVTDSAKLAVLGDITGHHWLEKAGHYFVMVADQYRNQQLVPPTATTTTNLHSLDKLLAGVFDAAIAIEAIVTAGESLNLGSTIMGSILNDAARVIDLLDLPKLTFPVLGLAIGHPTEHPEQKPRLPQDLMHFTNGYQALTADNARLAAYDQVIHDYYQQRGTHQRDETFSHHIVSEMSRDPQQRAGILQALQQQGFLTK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP015398_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015398_3

1416351-1416623

Orphan

I-E,II-B

Consensus_repeat	Method
GGTATTCCCCACGGGTGTGGGGGTGATCC	CRT
GGTATTCCCCACGGGTGTGGGGGTGATCC	PILER-CR
GTATTCCCCACGGGTGTGGGGGTGATCC	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP015398_3

>merge|NZ_CP015398|3|1416351-1416623|CRT,PILER-CR,CRISPRCasFinder
TGTATTCCCCACGGGTGTGGGGGTGATCCCGGGTGACTTGGTTCGGGATCTATGCCAGTTCGGTATTCCCCACGGGTGTGGGGGTGATCCTTGCATGGGTTCTGGTTCAACGGGCGTGAGTTGGTATTCCCCACGGGTGTGGGGGTGATCCTTAATGGATAAAGTCAAAGCTGCTGAAAGCGAGGTATTCCCCACGGGTGTGGGGGTGATTCCGGCCAATGATGTTGAATTGCGCTCGGGTGTTAGTTTTCCCCACATGTGTGTGGGCACTAC

>NZ_CP015398|3|2|1416351-1416562|CRT
TGTATTCCCCACGGGTGTGGGGGTGATCC	CGGGTGACTTGGTTCGGGATCTATGCCAGTTC
GGTATTCCCCACGGGTGTGGGGGTGATCC	TTGCATGGGTTCTGGTTCAACGGGCGTGAGTT
GGTATTCCCCACGGGTGTGGGGGTGATCC	TTAATGGATAAAGTCAAAGCTGCTGAAAGCGA
GGTATTCCCCACGGGTGTGGGGGTGATTC

>NZ_CP015398|3|2|1416352-1416562|PILER-CR
GTATTCCCCACGGGTGTGGGGGTGATCCC	GGGTGACTTGGTTCGGGATCTATGCCAGTTCG
GTATTCCCCACGGGTGTGGGGGTGATCCT	TGCATGGGTTCTGGTTCAACGGGCGTGAGTTG
GTATTCCCCACGGGTGTGGGGGTGATCCT	TAATGGATAAAGTCAAAGCTGCTGAAAGCGAG
GTATTCCCCACGGGTGTGGGGGTGATTC

>NZ_CP015398|3|3|1416352-1416623|CRISPRCasFinder
GTATTCCCCACGGGTGTGGGGGTGATCC	CGGGTGACTTGGTTCGGGATCTATGCCAGTTCG
GTATTCCCCACGGGTGTGGGGGTGATCC	TTGCATGGGTTCTGGTTCAACGGGCGTGAGTTG
GTATTCCCCACGGGTGTGGGGGTGATCC	TTAATGGATAAAGTCAAAGCTGCTGAAAGCGAG
GTATTCCCCACGGGTGTGGGGGTGATTC	CGGCCAATGATGTTGAATTGCGCTCGGGTGTTA
GTTTTCCCCACATGTGTGTGGGCACTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015398.1\|WP_024525308.1\|1413078_1413525_-\|LytTR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197918
NZ_CP015398.1\|WP_039104722.1\|1408616_1409453_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181334
NZ_CP015398.1\|WP_021742599.1\|1415829_1416141_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|374224
NZ_CP015398.1\|WP_065201356.1\|1424785_1425610_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP015398.1\|WP_021742597.1\|1413686_1414139_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133380
NZ_CP015398.1\|WP_024525297.1\|1424113_1424710_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP015398.1\|WP_039104721.1\|1409461_1409866_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP015398.1\|WP_011667631.1\|1419908_1421375_+\|catalase	unknown	unknown	gnl\|CDD\|365942
NZ_CP015398.1\|WP_039104716.1\|1412635_1413082_-\|DUF3021-domain-containing-protein	unknown	unknown	gnl\|CDD\|378668
NZ_CP015398.1\|WP_039104715.1\|1414260_1415700_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP015398.1\|WP_024525311.1\|1410549_1411983_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP015398.1\|WP_039104714.1\|1416702_1417056_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP015398.1\|WP_021742610.1\|1417177_1418185_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381305
NZ_CP015398.1\|WP_039104720.1\|1409955_1410441_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP015398.1\|WP_065201355.1\|1411969_1412575_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_CP015398.1\|WP_039104711.1\|1422719_1423982_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181958
NZ_CP015398.1\|WP_024525303.1\|1418318_1418969_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380313
NZ_CP015398.1\|WP_011667630.1\|1421468_1422014_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP015398.1\|WP_024525302.1\|1419057_1419543_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP015398.1\|WP_039104713.1\|1422218_1422641_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|378454

Protein	Function_ID	Function_description	E-value
NZ_CP015398.1\|WP_024525308.1\|1413078_1413525_-\|LytTR-family-transcriptional-regulator	gnl\|CDD\|197918	smart00850, LytTR, LytTr DNA-binding domain. This domain is found in a variety of bacterial transcriptional regulators. The domain binds to a specific DNA sequence pattern.	3.7729e-19
NZ_CP015398.1\|WP_039104722.1\|1408616_1409453_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|181334	PRK08263, PRK08263, short chain dehydrogenase; Provisional.	1.26898e-86
NZ_CP015398.1\|WP_021742599.1\|1415829_1416141_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	1.83833e-05
NZ_CP015398.1\|WP_065201356.1\|1424785_1425610_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.91288e-10
NZ_CP015398.1\|WP_021742597.1\|1413686_1414139_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	3.35261e-20
NZ_CP015398.1\|WP_024525297.1\|1424113_1424710_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.77011e-05
NZ_CP015398.1\|WP_039104721.1\|1409461_1409866_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.81732e-44
NZ_CP015398.1\|WP_011667631.1\|1419908_1421375_+\|catalase	gnl\|CDD\|365942	pfam00199, Catalase, Catalase.	0
NZ_CP015398.1\|WP_039104716.1\|1412635_1413082_-\|DUF3021-domain-containing-protein	gnl\|CDD\|378668	pfam11457, DUF3021, Protein of unknown function (DUF3021). This is a bacterial family of uncharacterized proteins.	2.23902e-27
NZ_CP015398.1\|WP_039104715.1\|1414260_1415700_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.37654e-89
NZ_CP015398.1\|WP_024525311.1\|1410549_1411983_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.74658e-47
NZ_CP015398.1\|WP_039104714.1\|1416702_1417056_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.16324e-40
NZ_CP015398.1\|WP_021742610.1\|1417177_1418185_+\|aldo/keto-reductase	gnl\|CDD\|381305	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins. Escherichia coli YajO is the prototype of this family. It is an uncharacterized aldo/keto reductase family oxidoreductase.	6.0695e-163
NZ_CP015398.1\|WP_039104720.1\|1409955_1410441_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.72488e-09
NZ_CP015398.1\|WP_065201355.1\|1411969_1412575_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	7.33511e-26
NZ_CP015398.1\|WP_039104711.1\|1422719_1423982_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	5.21543e-61
NZ_CP015398.1\|WP_024525303.1\|1418318_1418969_+\|nitroreductase	gnl\|CDD\|380313	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB. Members of this family utilize FMN as a cofactor and catalyze reduction of a variety of nitroaromatic compounds, including nitrofurans, nitrobenzens, nitrophenol, nitrobenzoate and quinones by using either NADH or NADPH as a source of reducing equivalents in an obligatory two-election transfer mechanism. The enzyme is typically a homodimer. Mycobacterium smegmatis nitroreductase NfnB plays a role in resistance to benzothiazinone.	3.94562e-44
NZ_CP015398.1\|WP_011667630.1\|1421468_1422014_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	5.63758e-25
NZ_CP015398.1\|WP_024525302.1\|1419057_1419543_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	6.88675e-12
NZ_CP015398.1\|WP_039104713.1\|1422218_1422641_-\|SRPBCC-family-protein	gnl\|CDD\|378454	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport. This family contains polyketide cylcases/dehydrases which are enzymes involved in polyketide synthesis. It also includes other proteins of the START superfamily.	0.00679351

>NZ_CP015398.1|WP_021742599.1|1415829_1416141_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTKANIVTYPAVFHDNEAGGYIVTFPDIEEAMTSGQTLGESLVNATTVLGQTLHHHPMVLPTATTITELMHQYPMAFIQFVAVDLDQVIEHAVPTDQADLQLT
>NZ_CP015398.1|WP_039104715.1|1414260_1415700_+|multidrug-efflux-MFS-transporter
MTTDITGKPYNRAMMVTILLIGTFLNVLNQTVLATAFPDLMKAFSINATTVQWLTTGFLLVNGIMIPLSAWLSTQFNSKWLWISAMTIFAGGTILCWAAPSFAMLLSGRLIQAVGVGVAMPLLQTIMFSIFPPEQRGSAMGLVGIAVGVGPAIGPTLAGFVVDNGSWRNIFGIMIPIAFVIILLSFFFMRPVIENRRTHLDVLSLILSSIGFGSVLYGFSTVGQNGWTDSTVITALAVGVIFVAVFAVRQLTISEPFLELRVFAKGQFTVATILGAIANTAMTGAELVLPMYLQIVRGQSALISGLTLLPGAIVIALMNPITGRIVDRIGGRELSIIGLACLTLGTLPLCFLQSDTALWWIILVYAVRMLGVSMVLMPITTVGMNALDRSLIAHGTAVNNTVKQIFSSIGTALVVSIMANVTKGNMPNVRLYIKQPTLLHHLIMNANLDGYTAAFIVTAAMSFLGFLMAFLVKRSTKKA
>NZ_CP015398.1|WP_021742597.1|1413686_1414139_-|MerR-family-transcriptional-regulator
MTVTDNFSNWLNLIQQVSQPEGITLGTSDLVKATGVPASQLRYWVEQGYIKPIDVPNERSRKFSYRVVFRVRAIKYFLDHGYTLSAAMDNVNQFRNLDIQLQRILTDHLTDLQLHEDGQIDISLGTVQDGQELLGLTIKDGSSQFWTKKV
>NZ_CP015398.1|WP_024525308.1|1413078_1413525_-|LytTR-family-transcriptional-regulator
MHVTFNLKASFIPPFITINAPAETPELQHLAANISQLTNSQLIAGISPRGTRELVPVNQIIRIHTDAKHVVMETKATTYTLPQRIYQLKQLLPSDLFLQLSSGELVNRQHIRHFSLTPSGLYQVLLSTGATTFVSRRCMQQIRKEFLK
>NZ_CP015398.1|WP_039104716.1|1412635_1413082_-|DUF3021-domain-containing-protein
MKRLGILTSGAFLGLSIGFLCALFFSLTNHATTFMPSSPDFVAHFSSNTMATLAAAGLWAAIGLLFGLTSLIFFNEHWSIARQTIWHFGLSYLGFTPLAILAGWFPLNVTWLLLYTLIFIGIYLVIWTYSMLRARKTVQHLNDTLSHH
>NZ_CP015398.1|WP_065201355.1|1411969_1412575_+|NAD(P)H-dependent-oxidoreductase
MMQINLVLGSSREKSLGRRVFNYLKNHRHDFEQQNAVHLNFLAVGDYQLPFFYEDVAPMNNQDRHLPAQQQAWLDDMEQASGYIFITPEYNHSFPAILKNGLDYLAFQTAKKPALIMSYSDNARAGQFGGVDLTPVLTRLGMTVLPPLVGIGNVQKNFNEAGEFLENAPSKDFYHQKLQQTVEKIAFYSRLFADNPFTPQS
>NZ_CP015398.1|WP_024525311.1|1410549_1411983_+|MFS-transporter
MKTQAIRWWVLACIGIMTFMDDLDASIVNVALPVINRALAINMGVAELIVSVYLITICVFLLPFGRLGDTFGKVRVFKWGMWLFVLGSLGCGLSPNIISLLLCRLIQGLGAAMTMSTNNGIITESFPINERGRALGWIGSFVALGMIAGPGIGGLLLSFLPWESIFWINVPIGLLLMGLGHAVLTTETGSDDRPVFDWLGSGLIGIGISGFFGYLYAGQQLGYGQPLLMGLLAVAIIATLVFILYEIKCQQPLLDLKIFRKTDFTVGVGTALLVFVANNFYMVLTPFYLENAKVIGASVAGLIMMILPVVQVLMAPIAGRIADNQGPFKLCLTGLLIILSAQVGFVLINQQTPLTLVGGLIGLLGLGNALFQSPNNALIMGAVEQTQLGVAGSVNALSRNIGMVLGNALATSLLFVIMSALTRSKVTNFDGHFKRAFITGQSWVYLLGSLLVLLAIGLVSFNTWKNKKMEALSDDAN
>NZ_CP015398.1|WP_039104720.1|1409955_1410441_-|MarR-family-transcriptional-regulator
MISSANAKNLMACISQLLTQDTTVDQEKKWMLSQVATDTALTATIKALRTADFHTIATISTLTPAYLKSLPEKTGLSQPTISRMMTRLSHHDLVEKYRTVTNSKDILVRLTPKGTQIAEIHAQLDQRILNNVAQVLEPYSQTEVTTTIQILQEIAKIDVNR
>NZ_CP015398.1|WP_039104721.1|1409461_1409866_-|MerR-family-transcriptional-regulator
MEYTMSDVCQKFNLSEYTLRYYDKINLIPGVYRNEQNRRVFTEDAVGWLQFVIALRSTGMPIADVKKYIALTTTTDDSTIQARLTMLQKQAAKVDSQIADMHKQRQIIADKINHYQQVMKTAPDPTKKSYQRWV
>NZ_CP015398.1|WP_039104722.1|1408616_1409453_+|SDR-family-NAD(P)-dependent-oxidoreductase
MTKTWFVTGSSRGLGRAIVENSLSNGDNVVATARNTASLADLAAEYGEHIYPLSLDVTDVDAVDAAIQMAIQHFGTIDVLVNNAGFADMDSVEEMPLATFKAQMDTDFYGTLYTIRAVLPTMREAKAGRIINISSIGGRIGGAGLSAYQSAKFAVNGLSEVLVHEVQSFGIQVTTVEPGGMRTEWGGDSMKAASSDLYKDSVGQAISMIHDQWHHAGDRYVSEPDKVAAAIHTLSEMPQAPVHLLIGKDAEQAAQQNAETLAKNDMANRSLTESTGNR
>NZ_CP015398.1|WP_039104714.1|1416702_1417056_-|MerR-family-transcriptional-regulator
MKIETVAQRYHISTSAIRYYEQQGLIGPINRINGIRDFNTTDLERMDFILCVKQCGMTIKQMKQFIATYEQGDSTLRERLAILQAQLSASEEQRTTLTRSINHLKQKIGDIRIRLAE
>NZ_CP015398.1|WP_021742610.1|1417177_1418185_+|aldo/keto-reductase
MQYTKLGHTEIMASKICVGAMSFGQPGTMHDWTLDYPASERVIGHALSLGINFFDTANGYSAGTSETYLGRALKAQRVARDQVVLASKVYFNPGRLSAKAIHHEIDGTLKRLGTDYLDLYIIHRFDYDTPIEETMAALNELVTAGKVRAIGASAMYGYQFNNMQQVAKDRGWAQFQTMENHYNLLYREDERELIPICQQQGVSLMPYSPLAAGHLSHSAWQVDTLRSQTDRVAMGKYDRTETEDQRIVARVAELAHKYQVSMTQIALAWQWAKGVAAPIVGSTKTSHLDEAVAALSVKLTTADIDYLEDLYRPHPIVGALDHNPAAGTILIDQKK
>NZ_CP015398.1|WP_024525303.1|1418318_1418969_+|nitroreductase
MDVLEAIKDRHATRAFDDKAIDDQNLTAIVTDAQRTPSWGNSQPWEVYIATGKSLEQIKSRYAAAAQAGVTEAADLAKAHRGDFSTMANQNMGHWVGTFRPIIEADPTTYWDSRENLYRAPAIAYLVLGQNPNSWSIYDLGAFSQTLSLAATARGVQSLSSYELVKYPDILRQELAVPTDRTIAMGIALGYEKPDKVLNQFRTDRVATQQILHIQH
>NZ_CP015398.1|WP_024525302.1|1419057_1419543_+|GNAT-family-N-acetyltransferase
MEITDATLADLPEILRIEQLGFTAEEAGTAEQYQDRLARLAGTFLVAKEKHKLVGFVVGAATQEPYVADWMFEHTPTNLPTGGHQLIYTIAIDPAYRGHGLGSRLLVALQERAQNAHRETLSLTSLERNVPFYLKNGFENHGVANSTHAGEVWFNLVKPLY
>NZ_CP015398.1|WP_011667631.1|1419908_1421375_+|catalase
MREDLKNSAGQPWGDNEHSLTAGQRGPVLIQDYNLLEKLAHFNRERIPERVVHAKGAGAEGTFRLTKDMHQYTKAKIFTEMGKSVPMRIRFSQVAGEMGSADTVRDVRGFALRFYTDDGNYDIVGNNTPVFFVNDPLKFPDFIHSQKRDPRTHERSQDMQWDFWAHSPESVHQVTILMSDRGIPASYRKMHGYGSHTFKWVNEAGEVFWVKYHFRTAQGIQNLSNDVAQRLAGENPDYLQADLYHAIEAGDFPTWKVCVQVIPEQAGLDYPADIFDVTQVVSQKDYPLIEIGEFTLNKNPDNYFEGVEEAAFSPANLVPGIEPSPDKLLQGRLFAYKDAARYRLGVNYEQLPANRPLNHPNNYERDGFMQTDNHGDQVNYEPNSQGGPQEDPAGRLTPYTVSGKAGNYAYQTDYGRAAGKLYRLLPADERQRLIETIVMNLGQVKSHDVKRLETAQFYEADHDYGLAVAKGLGLKLDEIKDYPFDTTH
>NZ_CP015398.1|WP_011667630.1|1421468_1422014_-|GNAT-family-N-acetyltransferase
MENLHLTDHLALVAPISPLAADLYALIAADRVNLSRWLPWANTMHEVADEAAFLTYAQGQIAAHQLWLAIITVNGKPAGMIDLHDKKDGHADVGYWLGRPYRGHGYISQSLQALEKLAFNDWQLNKLQILTVPDNIASQAVAKSNHYHRDARLPKHIPTLAGDYQDAIIFSKLRQDWLTQI
>NZ_CP015398.1|WP_039104713.1|1422218_1422641_-|SRPBCC-family-protein
MTDQKLFTNTVLIPADATRVHATLTNPQNLLKWVPEITAVDPETNVFVITRTRAAINQHEALTVTSNATTVTYTSREGRLPYQLVFTIVGQASQTLLQETLFVPRNTGLPLTLLSPIAKHALKQNLEMLAILLRRPAMPD
>NZ_CP015398.1|WP_039104711.1|1422719_1423982_-|FAD-dependent-oxidoreductase
MKLLVVGSSHGGRAAITAALAQDATIEIDLIEAGPVTTVYPTQVKVHANTRAIQLLATQHQLLISHAGQKQRLSYDKLILAPGAQATIPAVLSTTSQNVLPMRTRAQINHLKAAATDATIHHVIVIGGGYIGVGAADLFSQHGKQVTLIEHGPQLLGSYLDNDFSMPIQQALQQQGVTVHVNELVTGLTGAPDVTGVTTNQTTLSADLVVVATGTTPNTDWLKDTLDCLPNGLIKTDAYLQTSATDVFAVGDAIAVTYLPQHQSRSIALASNAQRQGELAALNLQTPVLPYTGVVGTSQWQAGHLQFGVTGLTDTAAQRANISHTSVTLTQDQRQSPNPAIPTKHVQFRLTYDPQTKQLLGAQVLADGNIDELINLLALALQAQQTLADLAVADFYMSPGKNDLPHLINAAAMTAYRQEK
>NZ_CP015398.1|WP_024525297.1|1424113_1424710_+|TetR/AcrR-family-transcriptional-regulator
MGTRRRGDELETAIYQVTYQLLATNNGTALTFSQVAKAAHTSRTVLYRYWESPFDLVLATLTHYRQQDPQSMQLEHIDQGSLRADLIYVGTSFAQAATAGVSQYFRQLFSLAVDEQDQRQLAKILSLSTTANLTLMQQVVENARRRHELLRTPPQATLLAMFNQIRYVTMIGGAVPGEIEITRLVDDLILPAMQQLGR
>NZ_CP015398.1|WP_065201356.1|1424785_1425610_-|helix-turn-helix-transcriptional-regulator
MPSQLGITLKQVRLQQHLSQATVATGICAQSMLSAIENGKYTPNATLLMRLCQRLKISLDQLSLAENFTISDLEQINDRLAKLCNHHRYTDLREFLLTDAVQAHLTTDVQLAAYYYYLGITDFQLGHLTDAQQQFQLALASAPAQHRTTLSRLCWMSLALIHANRQQSSASEEAMTQAVTQLKTAPYEANLNSLFYLAAVSHLKLNQLTIAAQWLERGIDFATDHDSHYMLANDYHLLAVIASRSEQIDQQRTAQATEHVLTTLFHESIYDRLD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015398_1	1.9\|80168\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80168-80197	30	NC_027990	Lactobacillus phage LBR48, complete genome	30459-30488	1	0.967
NZ_CP015398_1	1.12\|80366\|31\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80366-80396	31	NZ_CP020717	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed2, complete sequence	38961-38991	6	0.806
NZ_CP015398_1	1.15\|80565\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80565-80594	30	MF564201	Escherichia phage vB_EcoS-95, complete genome	49381-49410	6	0.8
NZ_CP015398_1	1.7\|80036\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80036-80065	30	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	9545-9574	7	0.767
NZ_CP015398_1	1.9\|80168\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80168-80197	30	MN855726	Bacteriophage sp. isolate 241, complete genome	3512-3541	7	0.767
NZ_CP015398_1	1.9\|80168\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80168-80197	30	MN856012	Myoviridae sp. isolate 96, complete genome	8725-8754	7	0.767
NZ_CP015398_1	1.10\|80234\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80234-80263	30	NZ_CP019064	Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence	94173-94202	7	0.767
NZ_CP015398_1	1.10\|80234\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80234-80263	30	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	241131-241160	7	0.767
NZ_CP015398_1	1.15\|80565\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80565-80594	30	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	2977-3006	7	0.767
NZ_CP015398_1	1.1\|79641\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	79641-79670	30	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	114471-114500	8	0.733
NZ_CP015398_1	1.6\|79970\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	79970-79999	30	HQ634174	Cyanophage MED4-213, complete genome	44079-44108	8	0.733
NZ_CP015398_1	1.6\|79970\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	79970-79999	30	GU075905	Prochlorococcus phage P-HM2, complete genome	69061-69090	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	JX976549	Acinetobacter phage IME-AB2, complete genome	27571-27600	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	MH853786	Acinetobacter phage vB_KpnM_IME285, complete genome	16434-16463	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	KP861229	Acinetobacter phage YMC11/12/R2315, complete genome	34772-34801	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	MH853788	Acinetobacter phage vB_KpnM_IME512, complete genome	22340-22369	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	KJ817802	Acinetobacter phage YMC-13-01-C62, complete genome	11594-11623	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	MN516422	Acinetobacter phage Bphi-R1888, complete genome	20907-20936	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	KP861231	Acinetobacter phage YMC11/12/R1215, complete genome	21808-21837	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	MN516421	Acinetobacter phage Bphi-R2919, complete genome	21836-21865	8	0.733
NZ_CP015398_1	1.13\|80433\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	80433-80462	30	KU510289	Acinetobacter phage LZ35, complete genome	27631-27660	8	0.733
NZ_CP015398_3	3.2\|1416441\|32\|NZ_CP015398\|CRT	1416441-1416472	32	MN694445	Marine virus AFVG_250M317, complete genome	3282-3313	8	0.75
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	MN693505	Marine virus AFVG_25M41, complete genome	16523-16554	8	0.75
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	MN693072	Marine virus AFVG_25M5, complete genome	21558-21589	8	0.75
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	MN693265	Marine virus AFVG_25M542, complete genome	20682-20713	8	0.75
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	MN693192	Marine virus AFVG_25M42, complete genome	21027-21058	8	0.75
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	MN693370	Marine virus AFVG_25M236, complete genome	17277-17308	8	0.75
NZ_CP015398_3	3.5\|1416442\|32\|NZ_CP015398\|PILER-CR	1416442-1416473	32	MN694445	Marine virus AFVG_250M317, complete genome	3282-3313	8	0.75
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	MN693505	Marine virus AFVG_25M41, complete genome	16523-16554	8	0.75
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	MN693072	Marine virus AFVG_25M5, complete genome	21558-21589	8	0.75
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	MN693265	Marine virus AFVG_25M542, complete genome	20682-20713	8	0.75
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	MN693192	Marine virus AFVG_25M42, complete genome	21027-21058	8	0.75
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	MN693370	Marine virus AFVG_25M236, complete genome	17277-17308	8	0.75
NZ_CP015398_1	1.1\|79641\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	79641-79670	30	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	242118-242147	9	0.7
NZ_CP015398_1	1.1\|79641\|30\|NZ_CP015398\|PILER-CR,CRISPRCasFinder,CRT	79641-79670	30	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	237078-237107	9	0.7
NZ_CP015398_3	3.2\|1416441\|32\|NZ_CP015398\|CRT	1416441-1416472	32	NZ_CP026601	Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence	82496-82527	9	0.719
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	MH823906	Citrobacter phage Maroon, complete genome	37651-37682	9	0.719
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	KX431560	Cronobacter phage vB_CsaM_leN, complete genome	37923-37954	9	0.719
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	NC_048646	Cronobacter phage vB_CsaM_leE, complete genome	37923-37954	9	0.719
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	KT381880	Citrobacter phage Margaery, complete genome	38096-38127	9	0.719
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	NC_048645	Cronobacter phage vB_CsaM_leB, complete genome	38459-38490	9	0.719
NZ_CP015398_3	3.5\|1416442\|32\|NZ_CP015398\|PILER-CR	1416442-1416473	32	NZ_CP026601	Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence	82496-82527	9	0.719
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	MH823906	Citrobacter phage Maroon, complete genome	37651-37682	9	0.719
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	KX431560	Cronobacter phage vB_CsaM_leN, complete genome	37923-37954	9	0.719
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	NC_048646	Cronobacter phage vB_CsaM_leE, complete genome	37923-37954	9	0.719
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	KT381880	Citrobacter phage Margaery, complete genome	38096-38127	9	0.719
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	NC_048645	Cronobacter phage vB_CsaM_leB, complete genome	38459-38490	9	0.719
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	MN693505	Marine virus AFVG_25M41, complete genome	16522-16554	9	0.727
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	MN693370	Marine virus AFVG_25M236, complete genome	17276-17308	9	0.727
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	MN693072	Marine virus AFVG_25M5, complete genome	21558-21590	9	0.727
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	MN693265	Marine virus AFVG_25M542, complete genome	20682-20714	9	0.727
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	MN693192	Marine virus AFVG_25M42, complete genome	21027-21059	9	0.727
NZ_CP015398_3	3.3\|1416502\|32\|NZ_CP015398\|CRT	1416502-1416533	32	NZ_CP015328	Bacillus filamentosus strain Hbe603 plasmid pBEH6, complete sequence	60226-60257	10	0.688
NZ_CP015398_3	3.6\|1416503\|32\|NZ_CP015398\|PILER-CR	1416503-1416534	32	NZ_CP015328	Bacillus filamentosus strain Hbe603 plasmid pBEH6, complete sequence	60226-60257	10	0.688
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	MH823906	Citrobacter phage Maroon, complete genome	37650-37682	10	0.697
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	KX431560	Cronobacter phage vB_CsaM_leN, complete genome	37922-37954	10	0.697
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	NC_048646	Cronobacter phage vB_CsaM_leE, complete genome	37922-37954	10	0.697
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	KT381880	Citrobacter phage Margaery, complete genome	38095-38127	10	0.697
NZ_CP015398_3	3.9\|1416502\|33\|NZ_CP015398\|CRISPRCasFinder	1416502-1416534	33	NC_048645	Cronobacter phage vB_CsaM_leB, complete genome	38458-38490	10	0.697

1. spacer 1.9|80168|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to NC_027990 (Lactobacillus phage LBR48, complete genome) position: , mismatch: 1, identity: 0.967

gacggcgggtaagtttgttgccgacgacgc	CRISPR spacer
gacggcgggtaagtttgttaccgacgacgc	Protospacer
*******************.**********

2. spacer 1.12|80366|31|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020717 (Cnuibacter physcomitrellae strain XA(T) plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.806

gaggtgagcagggagtcgtggcaatgcgccg-	CRISPR spacer
gaggtgagcaggcagtcgtgacag-gcgcgag	Protospacer
************ *******.**. **** .

3. spacer 1.15|80565|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to MF564201 (Escherichia phage vB_EcoS-95, complete genome) position: , mismatch: 6, identity: 0.8

aaacttgcaccagcatttatctttgatgtt	CRISPR spacer
cgagttgcaccagcatttttctttgttgta	Protospacer
 .* ************** ****** ***

4. spacer 1.7|80036|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 7, identity: 0.767

aggcgattgcgatcgaacttcaacgaatga	CRISPR spacer
cggcgattgcgttcgaacttcaaagcaccg	Protospacer
 ********** *********** * *. .

5. spacer 1.9|80168|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to MN855726 (Bacteriophage sp. isolate 241, complete genome) position: , mismatch: 7, identity: 0.767

gacggcgggtaagtttgttgccgacgacgc-	CRISPR spacer
ttgggcgggtaagtttgttgctgac-atgta	Protospacer
   ******************.*** *.*.

6. spacer 1.9|80168|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to MN856012 (Myoviridae sp. isolate 96, complete genome) position: , mismatch: 7, identity: 0.767

gacggcg-ggtaagtttgttgccgacgacgc	CRISPR spacer
-tcagtatggtaagtttgttgctgccgacgc	Protospacer
  *.*.. **************.* ******

7. spacer 1.10|80234|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019064 (Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agttaaagaactcgtatctgccatttttac	CRISPR spacer
atcatcagaactcgtatctgctatttttcc	Protospacer
* .   ***************.****** *

8. spacer 1.10|80234|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.767

agttaaagaactcgtatctgccatttttac	CRISPR spacer
agttaaagaaatcgaatctgccaaatccaa	Protospacer
********** *** ********  *..*

9. spacer 1.15|80565|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 7, identity: 0.767

aaacttgcaccagcatttatctttgatgtt	CRISPR spacer
tcagatacaccagcatttagctttgatgta	Protospacer
  *  *.************ *********

10. spacer 1.1|79641|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 8, identity: 0.733

aacgcgttgctgatcgtccttgagaattga	CRISPR spacer
gtggcgttgctgatcgacctggagaaccgg	Protospacer
.  ************* *** *****..*.

11. spacer 1.6|79970|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to HQ634174 (Cyanophage MED4-213, complete genome) position: , mismatch: 8, identity: 0.733

ctttaatctctagtccctgaccatcttttc	CRISPR spacer
ttccaaactctagttcctgaccatcttcga	Protospacer
.*..** *******.************.

12. spacer 1.6|79970|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to GU075905 (Prochlorococcus phage P-HM2, complete genome) position: , mismatch: 8, identity: 0.733

ctttaatctctagtccctgaccatcttttc	CRISPR spacer
ttccaaactctagttcctgaccatcttcga	Protospacer
.*..** *******.************.

13. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to JX976549 (Acinetobacter phage IME-AB2, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

14. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to MH853786 (Acinetobacter phage vB_KpnM_IME285, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

15. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to KP861229 (Acinetobacter phage YMC11/12/R2315, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

16. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to MH853788 (Acinetobacter phage vB_KpnM_IME512, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

17. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to KJ817802 (Acinetobacter phage YMC-13-01-C62, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

18. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to MN516422 (Acinetobacter phage Bphi-R1888, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

19. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to KP861231 (Acinetobacter phage YMC11/12/R1215, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

20. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to MN516421 (Acinetobacter phage Bphi-R2919, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

21. spacer 1.13|80433|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to KU510289 (Acinetobacter phage LZ35, complete genome) position: , mismatch: 8, identity: 0.733

gggtcatgaattcactcaagctgaattaga	CRISPR spacer
ataccgtgaaatcaatcaagctgaattagc	Protospacer
. ..*.**** *** **************

22. spacer 3.2|1416441|32|NZ_CP015398|CRT matches to MN694445 (Marine virus AFVG_250M317, complete genome) position: , mismatch: 8, identity: 0.75

ttgcatgggttctggttcaacgggcgtgagtt----	CRISPR spacer
tacaatgggttctggttcaacag----gagttgcag	Protospacer
*   *****************.*    *****

23. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to MN693505 (Marine virus AFVG_25M41, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

24. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to MN693072 (Marine virus AFVG_25M5, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

25. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to MN693265 (Marine virus AFVG_25M542, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

26. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to MN693192 (Marine virus AFVG_25M42, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

27. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to MN693370 (Marine virus AFVG_25M236, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

28. spacer 3.5|1416442|32|NZ_CP015398|PILER-CR matches to MN694445 (Marine virus AFVG_250M317, complete genome) position: , mismatch: 8, identity: 0.75

ttgcatgggttctggttcaacgggcgtgagtt----	CRISPR spacer
tacaatgggttctggttcaacag----gagttgcag	Protospacer
*   *****************.*    *****

29. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to MN693505 (Marine virus AFVG_25M41, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

30. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to MN693072 (Marine virus AFVG_25M5, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

31. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to MN693265 (Marine virus AFVG_25M542, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

32. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to MN693192 (Marine virus AFVG_25M42, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

33. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to MN693370 (Marine virus AFVG_25M236, complete genome) position: , mismatch: 8, identity: 0.75

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaa	Protospacer
  .**.******** *************  .*

34. spacer 1.1|79641|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 9, identity: 0.7

aacgcgttgctgatcgtccttgagaattga	CRISPR spacer
aacgcgttccagatcgtccttgatcgcgat	Protospacer
******** * ************  .. .

35. spacer 1.1|79641|30|NZ_CP015398|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 9, identity: 0.7

aacgcgttgctgatcgtccttgagaattga	CRISPR spacer
aacgcgttccagatcgtccttgatcgcgat	Protospacer
******** * ************  .. .

36. spacer 3.2|1416441|32|NZ_CP015398|CRT matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgcatgggttctggttcaacgggcgtgagtt	CRISPR spacer
tttcatgggttctggtacaacggtttttgtat	Protospacer
** ************* ****** . * .  *

37. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to MH823906 (Citrobacter phage Maroon, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

38. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to KX431560 (Cronobacter phage vB_CsaM_leN, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

39. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to NC_048646 (Cronobacter phage vB_CsaM_leE, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

40. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to KT381880 (Citrobacter phage Margaery, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

41. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to NC_048645 (Cronobacter phage vB_CsaM_leB, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

42. spacer 3.5|1416442|32|NZ_CP015398|PILER-CR matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgcatgggttctggttcaacgggcgtgagtt	CRISPR spacer
tttcatgggttctggtacaacggtttttgtat	Protospacer
** ************* ****** . * .  *

43. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to MH823906 (Citrobacter phage Maroon, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

44. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to KX431560 (Cronobacter phage vB_CsaM_leN, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

45. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to NC_048646 (Cronobacter phage vB_CsaM_leE, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

46. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to KT381880 (Citrobacter phage Margaery, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

47. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to NC_048645 (Cronobacter phage vB_CsaM_leB, complete genome) position: , mismatch: 9, identity: 0.719

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcc	Protospacer
  *.** *******.************* .

48. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to MN693505 (Marine virus AFVG_25M41, complete genome) position: , mismatch: 9, identity: 0.727

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaaa	Protospacer
  .**.******** *************  .*.

49. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to MN693370 (Marine virus AFVG_25M236, complete genome) position: , mismatch: 9, identity: 0.727

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaaa	Protospacer
  .**.******** *************  .*.

50. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to MN693072 (Marine virus AFVG_25M5, complete genome) position: , mismatch: 9, identity: 0.727

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaaa	Protospacer
  .**.******** *************  .*.

51. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to MN693265 (Marine virus AFVG_25M542, complete genome) position: , mismatch: 9, identity: 0.727

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaaa	Protospacer
  .**.******** *************  .*.

52. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to MN693192 (Marine virus AFVG_25M42, complete genome) position: , mismatch: 9, identity: 0.727

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
gagatagataaagtaaaagctgctgaaataaaa	Protospacer
  .**.******** *************  .*.

53. spacer 3.3|1416502|32|NZ_CP015398|CRT matches to NZ_CP015328 (Bacillus filamentosus strain Hbe603 plasmid pBEH6, complete sequence) position: , mismatch: 10, identity: 0.688

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
tgggcggataaagacaaagatgctgaaataat	Protospacer
* ...******** ***** ********  .

54. spacer 3.6|1416503|32|NZ_CP015398|PILER-CR matches to NZ_CP015328 (Bacillus filamentosus strain Hbe603 plasmid pBEH6, complete sequence) position: , mismatch: 10, identity: 0.688

ttaatggataaagtcaaagctgctgaaagcga	CRISPR spacer
tgggcggataaagacaaagatgctgaaataat	Protospacer
* ...******** ***** ********  .

55. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to MH823906 (Citrobacter phage Maroon, complete genome) position: , mismatch: 10, identity: 0.697

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcca	Protospacer
  *.** *******.************* .  .

56. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to KX431560 (Cronobacter phage vB_CsaM_leN, complete genome) position: , mismatch: 10, identity: 0.697

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcca	Protospacer
  *.** *******.************* .  .

57. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to NC_048646 (Cronobacter phage vB_CsaM_leE, complete genome) position: , mismatch: 10, identity: 0.697

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcca	Protospacer
  *.** *******.************* .  .

58. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to KT381880 (Citrobacter phage Margaery, complete genome) position: , mismatch: 10, identity: 0.697

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcca	Protospacer
  *.** *******.************* .  .

59. spacer 3.9|1416502|33|NZ_CP015398|CRISPRCasFinder matches to NC_048645 (Cronobacter phage vB_CsaM_leB, complete genome) position: , mismatch: 10, identity: 0.697

ttaatggataaagtcaaagctgctgaaagcgag	CRISPR spacer
ggagtgcataaagttaaagctgctgaaactcca	Protospacer
  *.** *******.************* .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1110808 : 1123290

Lactobacillus_phage(37.5%)

integrase,capsid,head,portal,terminase

attL 1110720:1110736|attR 1116999:1117015

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1110720:1110736	attL	NA	NA	NA	NA
WP_065201247.1\|1110808_1111966_-\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	2.8e-65	37.1
WP_065201248.1\|1112058_1112676_-	helix-turn-helix domain-containing protein	A0A0P0IV68	Lactobacillus_phage	1.0e-08	49.2
WP_155759846.1\|1112847_1113024_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_065201250.1\|1113293_1113512_+	hypothetical protein	NA	NA	NA	NA
WP_065201251.1\|1113508_1114309_+	bifunctional DNA primase/polymerase	NA	NA	NA	NA
WP_065201252.1\|1114308_1115703_+	virulence protein	Q4ZD27	Staphylococcus_phage	3.9e-69	35.3
WP_065201253.1\|1115848_1116268_+	hypothetical protein	NA	NA	NA	NA
WP_065201254.1\|1116288_1116582_+	hypothetical protein	NA	NA	NA	NA
WP_065201255.1\|1116568_1116910_+\|head	phage head closure protein	E9LUQ5	Lactobacillus_phage	5.3e-12	39.8
WP_065201256.1\|1117120_1117531_+	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	3.2e-19	44.0
1116999:1117015	attR	NA	NA	NA	NA
WP_065201257.1\|1118336_1118810_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_065201258.1\|1118806_1120504_+\|terminase	terminase large subunit	A0A2H4JBN3	uncultured_Caudovirales_phage	2.0e-123	41.1
WP_065201259.1\|1120448_1120661_+	hypothetical protein	NA	NA	NA	NA
WP_065201260.1\|1120657_1121758_+\|portal	phage portal protein	H9A113	Staphylococcus_phage	2.5e-47	34.3
WP_065201261.1\|1121754_1123290_+\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	2.0e-45	25.8

DBSCAN-SWA_2

1561574 : 1570830

Staphylococcus_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021741848.1\|1561574_1562426_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	5.8e-15	33.6
WP_011667560.1\|1562594_1563236_+	hemolysin III family protein	NA	NA	NA	NA
WP_065201421.1\|1563415_1563907_-	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	7.4e-23	37.2
WP_015473768.1\|1563923_1564874_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.0e-117	62.1
WP_065201422.1\|1564885_1566778_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	1.2e-49	29.5
WP_065201423.1\|1566806_1568000_-\|tRNA	CCA tRNA nucleotidyltransferase	G3MAR3	Bacillus_virus	2.1e-34	39.3
WP_042254316.1\|1568175_1569072_+	YitT family protein	M1Q1P6	Streptococcus_phage	1.6e-52	38.8
WP_065201424.1\|1569189_1570449_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_011667553.1\|1570554_1570830_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	3.1e-26	68.5

DBSCAN-SWA_3

1618874 : 1664469

Lactobacillus_phage(58.33%)

capsid,tRNA,holin,tail,plate,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011667510.1\|1618874_1620677_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_035464131.1\|1620690_1621986_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_021741049.1\|1622293_1622824_-	hypothetical protein	NA	NA	NA	NA
WP_039104524.1\|1623004_1623856_+	N-acetylmuramoyl-L-alanine amidase	A0A0N6W8I1	Bacillus_phage	2.7e-12	30.1
WP_176552897.1\|1623879_1624722_+	fructosamine kinase family protein	NA	NA	NA	NA
WP_039104521.1\|1624776_1625418_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_039104519.1\|1625530_1625974_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_024854987.1\|1625992_1628227_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	S4TRQ0	Salmonella_phage	6.2e-08	43.6
WP_024525181.1\|1628255_1628591_-	hypothetical protein	NA	NA	NA	NA
WP_065201434.1\|1628658_1629411_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_065201435.1\|1629413_1630364_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_011667498.1\|1630466_1630784_-	hypothetical protein	NA	NA	NA	NA
WP_024525178.1\|1631123_1631507_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_015473808.1\|1631727_1632090_+	hypothetical protein	NA	NA	NA	NA
WP_011667495.1\|1632584_1632836_+	hypothetical protein	NA	NA	NA	NA
WP_081277086.1\|1633840_1634176_+	SHOCT domain-containing protein	NA	NA	NA	NA
WP_024854981.1\|1635459_1635864_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_021742229.1\|1635881_1636301_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_021742230.1\|1636316_1636499_-	hypothetical protein	NA	NA	NA	NA
WP_065201437.1\|1636517_1637063_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_021742232.1\|1637075_1637333_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_065201438.1\|1637568_1638621_-	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	D6PSS2	Lactobacillus_phage	1.4e-156	83.6
WP_065201439.1\|1638620_1639136_-	hypothetical protein	D6PSS1	Lactobacillus_phage	3.2e-45	62.7
WP_015474081.1\|1639132_1639537_-\|holin	phage holin family protein	A0A097BY69	Enterococcus_phage	1.7e-17	41.4
WP_086990211.1\|1639593_1639764_-	hypothetical protein	D6PSR8	Lactobacillus_phage	6.5e-19	85.7
WP_065201440.1\|1639922_1640375_-	hypothetical protein	NA	NA	NA	NA
WP_065201441.1\|1640387_1642163_-	hypothetical protein	NA	NA	NA	NA
WP_024855661.1\|1642179_1642893_-	hypothetical protein	NA	NA	NA	NA
WP_024855660.1\|1642885_1644034_-\|plate	baseplate J/gp47 family protein	A0A2H4J8D2	uncultured_Caudovirales_phage	2.5e-45	32.6
WP_024855659.1\|1644017_1644404_-	DUF2634 domain-containing protein	NA	NA	NA	NA
WP_065201442.1\|1644393_1644807_-	hypothetical protein	NA	NA	NA	NA
WP_155759855.1\|1644815_1646006_-	hypothetical protein	NA	NA	NA	NA
WP_065201444.1\|1646068_1646536_-	hypothetical protein	D6PSZ5	Lactobacillus_phage	1.1e-10	35.9
WP_024855655.1\|1646550_1647528_-	hypothetical protein	NA	NA	NA	NA
WP_065201445.1\|1647587_1653464_-\|tail	phage tail tape measure protein	D6PSZ2	Lactobacillus_phage	1.5e-61	64.1
WP_099963031.1\|1653456_1653699_-	hypothetical protein	NA	NA	NA	NA
WP_024855653.1\|1653664_1654096_-	hypothetical protein	NA	NA	NA	NA
WP_024855652.1\|1654141_1654555_-	hypothetical protein	NA	NA	NA	NA
WP_024855651.1\|1654570_1655716_-	DUF3383 family protein	NA	NA	NA	NA
WP_065201446.1\|1655699_1656188_-	hypothetical protein	NA	NA	NA	NA
WP_024855649.1\|1656174_1656564_-	hypothetical protein	NA	NA	NA	NA
WP_139588298.1\|1656556_1657042_-	hypothetical protein	D6PSY0	Lactobacillus_phage	6.8e-29	45.2
WP_065201447.1\|1657167_1657506_-	hypothetical protein	NA	NA	NA	NA
WP_024855646.1\|1657517_1657697_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_024855645.1\|1657712_1658216_-	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_065201448.1\|1658298_1659456_-\|capsid	major capsid protein	NA	NA	NA	NA
WP_065201449.1\|1659468_1659849_-	hypothetical protein	NA	NA	NA	NA
WP_024855642.1\|1659860_1660370_-	hypothetical protein	NA	NA	NA	NA
WP_024855641.1\|1660382_1661312_-	hypothetical protein	NA	NA	NA	NA
WP_024855640.1\|1661311_1662943_-\|portal	phage portal protein	A0A0A1ER87	Lactobacillus_phage	2.8e-42	30.9
WP_065201450.1\|1662960_1664469_-\|terminase	phage terminase large subunit	A5GYP8	Lactococcus_phage	3.3e-130	51.7

DBSCAN-SWA_4

1670318 : 1679714

Lactobacillus_phage(62.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065201455.1\|1670318_1670588_+	DUF3892 domain-containing protein	A0A059NT53	Lactococcus_phage	3.6e-11	61.0
WP_155759857.1\|1670787_1670955_-	BC1881 family protein	NA	NA	NA	NA
WP_065201456.1\|1671483_1671981_-	hypothetical protein	NA	NA	NA	NA
WP_052493602.1\|1672189_1672618_-	hypothetical protein	D6PSU8	Lactobacillus_phage	8.4e-23	62.2
WP_065201457.1\|1672733_1673177_-	RusA family crossover junction endodeoxyribonuclease	D6PSU4	Lactobacillus_phage	2.6e-43	63.4
WP_065201458.1\|1673169_1673880_-	antA/AntB antirepressor family protein	U5U413	Lactobacillus_phage	1.4e-30	43.7
WP_065201459.1\|1673876_1674818_-	DUF4373 domain-containing protein	D6PSU3	Lactobacillus_phage	1.6e-13	78.9
WP_081277049.1\|1674829_1675693_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A0P0IZH9	Lactobacillus_phage	6.0e-76	49.7
WP_024855624.1\|1675619_1676678_-	recombinase RecT	D7RWF9	Brochothrix_phage	4.0e-58	50.4
WP_015474119.1\|1676678_1676894_-	hypothetical protein	NA	NA	NA	NA
WP_024855623.1\|1676884_1677178_-	hypothetical protein	NA	NA	NA	NA
WP_155249622.1\|1677287_1677464_-	hypothetical protein	NA	NA	NA	NA
WP_024855622.1\|1677476_1677740_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024855621.1\|1677724_1678279_-	hypothetical protein	NA	NA	NA	NA
WP_024855620.1\|1678339_1678564_-	hypothetical protein	NA	NA	NA	NA
WP_024855619.1\|1678612_1678798_+	hypothetical protein	NA	NA	NA	NA
WP_021742303.1\|1678930_1679179_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024855618.1\|1679345_1679714_+	helix-turn-helix transcriptional regulator	A8ATX5	Listeria_phage	1.7e-08	38.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015398

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection