CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016191	Mycobacteroides abscessus strain FLAC030 chromosome, complete genome	3 crisprs	c2c9_V-U4,cas3,csa3,DinG,DEDDh,cas4,WYL	0	1	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016191_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016191_1

391074-391171

Orphan

Consensus_repeat	Method
GTGGCGCGGCTCCTGGGGTCTGGGTTCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016191_1

>merge|NZ_CP016191|1|391074-391171|CRISPRCasFinder
GTGGCGCGGCTCCTGGGGTCTGGGTTCCGCAGCCTGGTGGACTACCCGGACGGTGGGCGCAGCGCCCTAGTGGCGCGGCTCCTGGGGTCTGGGGTCCG

>NZ_CP016191|1|1|391074-391171|CRISPRCasFinder
GTGGCGCGGCTCCTGGGGTCTGGGTTCCG	CAGCCTGGTGGACTACCCGGACGGTGGGCGCAGCGCCCTA
GTGGCGCGGCTCCTGGGGTCTGGGGTCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016191.1\|WP_065209221.1\|392438_394001_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209215.1\|385506_385749_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|185640
NZ_CP016191.1\|WP_065209219.1\|389022_390024_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366631
NZ_CP016191.1\|WP_065209212.1\|384212_384548_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209216.1\|385830_386724_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_154021684.1\|399171_400308_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_005065400.1\|382092_382809_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP016191.1\|WP_065209225.1\|396362_396638_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209213.1\|384584_384974_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209228.1\|397397_399062_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209214.1\|385011_385260_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274575
NZ_CP016191.1\|WP_065209217.1\|386723_386975_+\|glutaredoxin-family-protein	unknown	unknown	gnl\|CDD\|239274
NZ_CP016191.1\|WP_065209220.1\|392115_392376_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209226.1\|396630_396870_+\|AraC-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209223.1\|394332_394893_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235561
NZ_CP016191.1\|WP_131831764.1\|396862_397396_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_079640362.1\|387023_389036_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|280533
NZ_CP016191.1\|WP_065209222.1\|393997_394273_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_005065402.1\|382956_383541_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_131831763.1\|400798_401068_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016191.1\|WP_065209217.1\|386723_386975_+\|glutaredoxin-family-protein	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	4.91709e-29
NZ_CP016191.1\|WP_065209219.1\|389022_390024_+\|hypothetical-protein	gnl\|CDD\|366631	pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.	6.38032e-12
NZ_CP016191.1\|WP_065209223.1\|394332_394893_+\|hypothetical-protein	gnl\|CDD\|235561	PRK05686, fliG, flagellar motor switch protein G; Validated.	0.00123579
NZ_CP016191.1\|WP_005065400.1\|382092_382809_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.26986e-05
NZ_CP016191.1\|WP_065209215.1\|385506_385749_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|185640	PTZ00461, PTZ00461, isovaleryl-CoA dehydrogenase; Provisional.	0.00421892
NZ_CP016191.1\|WP_079640362.1\|387023_389036_+\|N-6-DNA-methylase	gnl\|CDD\|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	4.15681e-20
NZ_CP016191.1\|WP_065209214.1\|385011_385260_+\|hypothetical-protein	gnl\|CDD\|274575	TIGR03429, Tryptophan_dimethylallyltransferase_2, aromatic prenyltransferase, DMATS type. Members of this protein family are mostly fungal enzymes of secondary metabolite production. Characterized or partially characterized members include several examples of dimethylallyltryptophan synthase, a brevianamide F prenyltransferase, LtxC from lyngbyatoxin biosynthesis, and a probable dimethylallyl tyrosine synthase.	0.00541985

>NZ_CP016191.1|WP_065209219.1|389022_390024_+|hypothetical-protein
MPTIEDVFHVEYGNQLDMNKQIPDPNGVCFVGRKGNNQGISGRVREIPGVKKYPAGALTVALGGSRLLATFVQQEPFYTAQNVAVLTPRDANMPLSERLFYAMAITANRYRYTAFGREANRTIRTIELPAKVPSWVSSAVVESLSHMEDSADDPIELTPPETWGTYRVDELFTVHKGDYVKGSGKTVGNIPRITSTASNNGQSGLCGMTPNAEAGSISVARNGSVGEAFYQPTRYFATDDVHVFTPLPEVGPITAGAALFVCTIIRLEKYRYNYGRKWSLDKMRATEIRLPQREDGTPDWDYMTRYVHGLPFSSVLADEPGNSEDETEPAQRG
>NZ_CP016191.1|WP_079640362.1|387023_389036_+|N-6-DNA-methylase
MVGVSYRRSGWVDKVRPANCVTGVIHEGWLVANERNNEKLVRDKLVELGYYESEDLTVEEQQSKNATIKRLLRAASKSGSGNVGYPEFIVTSIEDDDVVLIIECKAAKNRHASKGLDKPVEFAVDGALHYARALSKEFHVVAVGSSGESERDWKVSTYLHAKGTDVPIPLTARSGVAIDRIVSWDDYRDAFTYDPEVKRKRIEDLLAVSRAMHNFMRDYARLTESEKPLLVSGTLIALMNKPFRTSYSTYKADRLQSAWLNAIKEQIEEAEIPRAKKNNITQPYSSIAVHPELGRSTEKFPKGPLHELIRILDTEVMPLMDVYHDYDVVGQFYGEFLKYTGGDKKSLGIVLTPRHITDLFSRLAQVSKDDVVVDICAGTGGFLIAAMARMLEQCVTEDERLDVKRNRLIGVEDQPNMYTLAASNMILRGDGKANLYQGSCFEKPILDAIKKHRRNTREKAGTLRPNIGLLNPPYSQKGEGLNELDFVMTMLDVLAPGGLGFAIVPVSCATGTYGKHELLKYHRLEAVMSMPPELFSPVGVVTCVMVFRAHTPHANTPDFKTWFGYWREDGFIKTKHMGRIDAGGWEDIRDHWVDTFVNRTVKVGESVLHRVGPEDEWTAEAYMQTDYSVLTQADFEKVVRDYAIYKATRNHGGVEESESEDDEETDDADD
>NZ_CP016191.1|WP_065209217.1|386723_386975_+|glutaredoxin-family-protein
MLGHGKQQVIVYTKPLCPQCEQTKKWLDGRGIAYETRDVTADEGAREEALALGYLGAPVVVADGEHWSGFRLDRLKALATDAA
>NZ_CP016191.1|WP_065209216.1|385830_386724_+|hypothetical-protein
MVSASTPIPAAHNSTSGGRDTKITKRLADALRKREMMVMAGAPAASIAAIETRIARLGGAHLIADQPETTAATVHPITDAPSAAKGEDRAQEDGLEAIRRLTAARIAVIEAKRARIAALRAALEAAEADLDATLDAAWRSPLGEGIAPLMSAVPDTDPVQPAEPAVEPDTADDVETSTSPAADDEGNPWAGLAERAAAERADAEAVEVLGEAFAAYEPAHVLAVARGGSARWVRGPGGEWLVAVRETLTLEGRWAEIERRDGTTSVERLSRAVAVGTVQGVVVAVCEVEPDDTAGVA
>NZ_CP016191.1|WP_065209215.1|385506_385749_+|helix-turn-helix-domain-containing-protein
MSRTPKDIEVTPELRRLITTARKAVRVANRAQEQLKEAAHQRQHAIAALTEHGMSARQIAEQVGVTEAAVYLTRSRTRKP
>NZ_CP016191.1|WP_065209214.1|385011_385260_+|hypothetical-protein
MGAYRIEIVPDRQKLRVLDGDSGALSPGAAVVVLNDVTDYQASAIARRVATYLAKIGWAIPAEGFGDTVEKIAADVKAKTGG
>NZ_CP016191.1|WP_065209213.1|384584_384974_+|hypothetical-protein
MTDDLNTLLDNIDALEADDRGADSDAPYPWTDAATWRADGGHQEPDDEPIIPWDIPGRVIMLTAHLGDGRAASWSMLTGWSGDPCVVRAAQAVAALYSELGEMCAAARGLIGVAVDGWVSEAVWAAARL
>NZ_CP016191.1|WP_065209212.1|384212_384548_+|hypothetical-protein
MRSLDDLIADIDQLEADDELRPLPGESEAEFKARMLSEFDELNAAEDTGALTIAPWDAWRWTPAAEPEPTPAAAPTYLIDPEDIHTIMPRGGPLTVSIGGRRLGTLNPAAA
>NZ_CP016191.1|WP_005065402.1|382956_383541_-|hypothetical-protein
MKKRLVSAGVIALAAALSGPALAAAAPADEQQIRDIVAGEAAAIKSLDNAKLSTFFCDKFRGVVASKTADDQIPPLSQVAGYGPQMISAVASAAGVSGPTTQALTTAIQNNDDKAYRSSFHNAAREVLSGVTYNVSDVNVTAPTATADVTAQGHDVTANQQREFVQENGKWKDCTDPEKRAQTSGNPLLTSLLN
>NZ_CP016191.1|WP_005065400.1|382092_382809_-|GNAT-family-N-acetyltransferase
MPNFSPIITDFWSTYFGRGTVLQDGDDFQLTVYPDLDEDAQLMVLHTADGKTKVSLVPELAERAGFDGAQPISAESFWNSLDAAGMTMHGADSLFYFTEEARAALVAEPPTGDIRQLTADDGAIFKAFESAATEEDLDDAQVELDHWAVFGSFDNGRLVGVASMYQWEDAPIMDLGVLVLPIFRGRGHARGLVRAAFRYACTRGYEPQYRCQLDNAASSALAPVAGLTLFGTLDVITS
>NZ_CP016191.1|WP_065209220.1|392115_392376_+|hypothetical-protein
MAICMDEVASLLPADTPSEVSVQWIAETFGVTEATVKYAIQVGKLPARRIPDRTGGTAAWRVRPEHALLIWGHRLLTRNIHASNQG
>NZ_CP016191.1|WP_065209221.1|392438_394001_+|hypothetical-protein
MTLPNNVNFNADNPFGDVIGRDWLTDLEQSTDFWNRSPQLQYIAWAAAQEKVSPWGLLMLAQLHRLSHIKPTVVLVKRDGSPGQTLFSGTSLNMFGCLTADSGGGKSVTFKLSSEIIPPSHTPISDGTGQGLVKSIAETEKVTSEDGQKLAEPYYITRFNRHSLVVHAPEIKTLNAEFARENSKTDSMMRSMWSGETVGMTTGDRDRRVTLPPNMYRIVGAWGVQAVNAWAILAGVDDGTPQRFLWMPGEEFRRGITRTNPGQVTFPEPVFGQVGSNPFGVSGGELPTEYKDGDPLPAPIWVTWSPQMRTDIAALQAQREALRDREPYADLTPEQVAAEEAVIMQSHSNLTRIKLAAMFAFLHGRPNPTDEDWELAGYQLQVSTRELAGVWKKVQGKADAERRKRAEDRGVEMHIARATADEKDAQEQSAFTHEVWQHICQSGPFDNRQLRKWAGGDNRKKMLTKALRALVDDERVMLDGGNRYWGVWVSPDGRTTYCPAEKVGQFIPLVPRSTTQGGAA
>NZ_CP016191.1|WP_065209222.1|393997_394273_+|hypothetical-protein
MTEQPDRYALRYTRKRVLEEVYLEPYVSTRESLIRHTGHTPERVDTAIQALIAEGVIYEDGEGGISLTSSGEKERRVWIREWRRKRRQRRA
>NZ_CP016191.1|WP_065209223.1|394332_394893_+|hypothetical-protein
MPNTTDYTLIPLNPPLVVSGRVEVVREDEQPFDFENGLAVALAEMLDSDGTHYDYSVVMPNGRVYEVGCYLITSAEPWTPNARPANNIAAPSGGSTPAPSAFSTEVWNELSSNGPMSIKEIRAWAGGDARRRMVTVALRDLQDRGLIVIDGGGRYWATHKGQLLPFVRSAEFTPSTDGDIAREINA
>NZ_CP016191.1|WP_065209225.1|396362_396638_+|hypothetical-protein
MSLSTVIARFLEDTLDQESGSVAEELSVPATADLFGVSNSAIYHAIKVGKLAAAPVLTADGSVAGYRIPLHGAFAVWGHRLLNTKKDAADA
>NZ_CP016191.1|WP_065209226.1|396630_396870_+|AraC-family-transcriptional-regulator
MRDTERAERLAVVADQLTTLRAERLAVVADQLTTLRAERDELIRALRDHGWTLERIAQHAGITAQAIHKVLKKENTNHD
>NZ_CP016191.1|WP_131831764.1|396862_397396_+|hypothetical-protein
MTDPRVGVRSMNGIPIVELPDHRGFDTADELADAILAQINSGSLPPATKEQTARATAAAVLQQLFMRKHGKRMLALRGRIQSGDAPQSRQNIDNAAEKLRKNTAALDRPTIGEVIDSGVSAAVNGQSKVLKGSSGEGDDWMAGLGFEELEQLVYAKFGDEGHPIRRLWRGLIEKLDG
>NZ_CP016191.1|WP_065209228.1|397397_399062_+|hypothetical-protein
MPAPIRNLDLKVLSRLWFTGSITEVDLHKRFGIRANDPVIQALRADRRIEPTRTPRIRPCVHVPKTVPHAQTGEPVVIEDALTPEALEAVRFTLATLRITDTVSYNDVIARFGAGHAALAKDALLSDDLITVSGEALTARTIYAIDTDEAQAYLATVNQSAPAADTQPIAPKTVPTAPAADPNAFPTERLNALGDDAWEKGVYQLIADTDRRGGYPVGDTPKPATQALLDSGWARRNPDTPSLVEFRSPKHDDELRRELGDEGFRRVVQATAAVVMLLSERADSLDILRAIYGDRAVDLATVRLSGAVIKREDKGWSLLPKGQRPAYFTAQEKAKLREQIDEAKRRKEAERQREEADRRTAAFEKRRAEDPAFAELADRVTSVDQKLDVVSRNSRESRDGVGAIYESVKKIEENVSTGAQKTGRVYAQPTDHDVAVRILEILLVEGHKTRNHFTSRRFKGPRQPLVGPALDLLVESGAVRKVSSLYMLVDPTKFGYTAEELRERYEATKRTYASRTAKARERAARAVDSVRDSQFVASVKSRIGGSSMLEALDA
>NZ_CP016191.1|WP_154021684.1|399171_400308_+|hypothetical-protein
MASIRSAFSRGDTDPDVVSENLVFYWVWFWTFTGVSVFVNAVHAWIKAPLFFSLLRTTDPETPKQTHILWEAWKTADDAPPVWFVALAVFLGALMPVALAFGSHALAHPRPGVSRAREVGTYVLTGATVVGAFVLSFLAMQDMAMMFLGLTPMQAAILPIAVDIAIVSSLWEIVSRSPKVHTSAAQQKISEAVAEFNAARETDNAALLERVETTLDTVQERFDTSLAAFHDTILGQVRDELGTALETVQERLETFREMVQNQTTPSRPSVSSRPVSRVSGGSSQPERLITAPETLAAELVNRGALTQPQDIIEMVLTASLDGSSTQKIADAVTAQLPSGKSISKSTAHRIMSVARDLDAELVAAEMESETESEPAMAS
>NZ_CP016191.1|WP_131831763.1|400798_401068_+|hypothetical-protein
MTDIREAVDAGVTATEAFGARRGGLVGVWLDDPDRPGVSAFVNQGRLTRLVIPQAYMGMRREELEAVINAVIINAHLDASPAIRARSAA

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016191_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016191_2

410646-410851

TypeV-U4

Consensus_repeat	Method
GCCGTCACCCCCGCGCCCGTGGAACGGAC	PILER-CR
GCCGTCATCCCCGCGCCCGTGGA	CRISPRCasFinder

3 spacers

c2c9_V-U4

The CRISPR arrays of NZ_CP016191_2

>merge|NZ_CP016191|2|410646-410851|PILER-CR,CRISPRCasFinder
GCCGTCATCCCCGCGCCCGTGGAACGGACCTGTGGACCGGTGAGGAGCTGACTGAGCACTTGCCGTCATCCCCGCGCCCGTGCAGATGCGACATGTCTGTCACCAGAACGATGCCGTCACCCCCGCGCCCGTGGAACGGACATTTTGTCCGGGTCGAAACGAACCCCAGGTCTCCTTGCCGTCACCCCCGCGCCCGTGGACCGGAC

>NZ_CP016191|2|1|410646-410851|PILER-CR
GCCGTCATCCCCGCGCCCGTGGAACGGAC	CTGTGGACCGGTGAGGAGCTGACTGAGCACTT
GCCGTCATCCCCGCGCCCGTGCAGATGCG	ACATGTCTGTCACCAGAACGATGCCGTCAC
CCCCGCGCCCGTGGAACGGACATTTTGTC	CGGGTCGAAACGAACCCCAGGTCTCCTTGCCGTCAC
CCCCGCGCCCGTGGACCGGAC

>NZ_CP016191|2|2|410646-410845|CRISPRCasFinder
GCCGTCATCCCCGCGCCCGTGGA	ACGGACCTGTGGACCGGTGAGGAGCTGACTGAGCACTT
GCCGTCATCCCCGCGCCCGTGCA	GATGCGACATGTCTGTCACCAGAACGAT
GCCGTCACCCCCGCGCCCGTGGA	ACGGACATTTTGTCCGGGTCGAAACGAACCCCAGGTCTCCTT
GCCGTCACCCCCGCGCCCGTGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016191.1\|WP_079640361.1\|416910_417576_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379158
NZ_CP016191.1\|WP_065209232.1\|401302_402652_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NZ_CP016191.1\|WP_131831763.1\|400798_401068_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209237.1\|406562_408842_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367841
NZ_CP016191.1\|WP_131831762.1\|413265_414000_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209242.1\|412708_413095_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224514
NZ_CP016191.1\|WP_065209244.1\|414031_414310_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209238.1\|408877_410176_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226365
NZ_CP016191.1\|WP_065209245.1\|414570_415044_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP016191.1\|WP_065209241.1\|412293_412521_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP016191.1\|WP_065209248.1\|415966_416914_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209234.1\|403507_405655_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP016191.1\|WP_065209235.1\|405928_406180_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379402
NZ_CP016191.1\|WP_065209239.1\|410261_410639_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209236.1\|406183_406531_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209231.1\|401064_401313_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_079673336.1\|402682_403348_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209247.1\|415472_415970_-\|DUF732-domain-containing-protein	unknown	unknown	gnl\|CDD\|377566
NZ_CP016191.1\|WP_065209246.1\|415117_415447_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_065209240.1\|410872_412297_-\|transposase	c2c9_V-U4	-	gnl\|CDD\|223747

Protein	Function_ID	Function_description	E-value
NZ_CP016191.1\|WP_065209241.1\|412293_412521_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.00586068
NZ_CP016191.1\|WP_065209234.1\|403507_405655_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.14869e-07
NZ_CP016191.1\|WP_065209235.1\|405928_406180_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379402	pfam13936, HTH_38, Helix-turn-helix domain. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	0.000710136
NZ_CP016191.1\|WP_065209232.1\|401302_402652_+\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00100542
NZ_CP016191.1\|WP_079640361.1\|416910_417576_-\|hypothetical-protein	gnl\|CDD\|379158	pfam13392, HNH_3, HNH endonuclease. This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.	6.56487e-08
NZ_CP016191.1\|WP_065209237.1\|406562_408842_+\|hypothetical-protein	gnl\|CDD\|367841	pfam04147, Nop14, Nop14-like family. Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production.	0.00016111
NZ_CP016191.1\|WP_065209242.1\|412708_413095_-\|hypothetical-protein	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	0.00509293
NZ_CP016191.1\|WP_065209245.1\|414570_415044_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.82072e-11
NZ_CP016191.1\|WP_065209247.1\|415472_415970_-\|DUF732-domain-containing-protein	gnl\|CDD\|377566	pfam05901, Excalibur, Excalibur calcium-binding domain. Extracellular Ca2+-dependent nuclease YokF from Bacillus subtilis and several other surface-exposed proteins from diverse bacteria are encoded in the genomes in two paralogous forms that differ by a ~45 amino acid fragment, which comprises a novel conserved domain. Sequence analysis of this domain revealed a conserved DxDxDGxxCE motif, which is strikingly similar to the Ca2+-binding loop of the calmodulin-like EF-hand domains, suggesting an evolutionary relationship between them. Functions of many of the other proteins in which the novel domain, named Excalibur (extracellular calcium-binding region), is found, as well as a structural model of its conserved motif are consistent with the notion that the Excalibur domain binds calcium. This domain is but one more example of the diversity of structural contexts surrounding the EF-hand-like calcium-binding loop in bacteria. This loop is thus more widespread than hitherto recognized and the evolution of EF-hand-like domains is probably more complex than previously appreciated.	2.72134e-17
NZ_CP016191.1\|WP_065209238.1\|408877_410176_+\|hypothetical-protein	gnl\|CDD\|226365	COG3846, TrbL, Type IV secretory pathway, TrbL components [Intracellular trafficking and secretion].	0.000113995
NZ_CP016191.1\|WP_065209240.1\|410872_412297_-\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.92104e-30

>NZ_CP016191.1|WP_065209239.1|410261_410639_+|hypothetical-protein
MRFTHADGREVTVEVLIPGEEVTTELVLDTEWASKSLKVSGDTQLASRVGAALLDGERVQIGEPWVYVHISPYRPDYAAIAAAICVGLTPDMSTLTDEQRHMVAGMDMDARHRAVTERPGRRICF
>NZ_CP016191.1|WP_065209238.1|408877_410176_+|hypothetical-protein
MVELPWDDAKTRFEELAKKFDSFALTFNEGAKGALADAMEDRVKAVNEFTSAVAMAIMDRPAASAAAQHAADEVLRDAPKPAEVRKAEVEAAFMTLRAKQSIIPLPQAAAYEQKAQELRSRREEAYEFHTDASSVNAPNFIASPPPMPELANNSRGVDGGGHGNSGTGYPGGNGGQGASGGGPGAGAPGSGSVTGGSGSGGGLGGGSVGDSEIGTETSSDGLGAGAGGMQQPMMGQQPMQGQPQAGAAGANPAAFGQQPGMLGSTSPSAADAMRRNRDRKRDRDRDIATGLTGAAGGAAAVMGGAAASGVDRGVSVAGVNTKADTSGLGTNLSGANGPKPGEGGRGGAGGGMMRGGMMGGMPMGSGAQGGAGGTKEKPDIKPGVKDAALHGYEPLKDAIPGGVIGSETAEPEDETGVDRFFDKEDWDRKSRS
>NZ_CP016191.1|WP_065209237.1|406562_408842_+|hypothetical-protein
MAYYETHPIVDGEVLDSKVVTDDGDGKRDASSARRDGDSGNKDGNKGGGKGGGKGGVGRNLLNAVVPATALASRKTWDVSKRAATAVSNKLRDPKFLVKRVLPGGMVLAGIEIFDAIRSADPIIHNPPAEGRTRYLPVAGNGDIDSPHGDPNATVEALDAQIDKVNQDTWGFDPDKIWSYCDAGNCGEGCIEIEVGPLEFDEEGAVTPMLRWSDIVDEIYGTLSQYAGEMWADRLLQKYGTNGIAELESLVTRTEDVATALVAAVKASEEMGVGSYQALRHMVRAGREEMQGRLDDENSTYGWVGDALFGGRGEGSLERLKEAGKKVSAAQQSNDEAIAKLNEALDAWDAKIAGTEDNTTSTPPVPFEQSNNSRGVVDDDEPMTPLPGSPGGVGSVDGGPTADPLDNDEKTDPFMDSLADKLGNLGTPESPFASSPLGAGGGGLPDMGSGAPLSGGATNPFESADSPLSDNAENPFEDDEDDVLDEGEGGIEEESDDDTLDEGEGGFEDEDLDDIVEKTDDAADGVVEDTPAEGEDAPVTAEASVAPAAAVNTDPNSPEARTVTLPDGRQIEFPDAKTAEMVRALVAADPSAPTSIYTAADQAGFPVPPMGQPIGDMVPPSSIRPGDLVMGAAGSGVFIGNGEVLMENQEVKPLADVTQFTEPNQGVYRLDNPDAPAGTDPSTAAAQPVSADGTAAPVTGDTSPVGGGSQPDGMSTTTGTPGQPDTVPAGETVTPDADQGGGLGDTTEEESLDPNAAAF
>NZ_CP016191.1|WP_065209236.1|406183_406531_+|hypothetical-protein
MPQNQTEIQLDDEVLAAVTSTLKNFAERLDAASKQAVHELEEMMLEPLKQQTGSIPPVYQDLADALTTTVRRMESINRKLTGMLRTDAATIDNQVQVQGENQTMHARRVDAIDTL
>NZ_CP016191.1|WP_065209235.1|405928_406180_+|helix-turn-helix-domain-containing-protein
MSDHAANVLESVGDFEARIIAERFRRCTERVEEARKAVRVAAAERRELILELRDRGWSLRRIADLVGVSTTTIHQIVQPRKKG
>NZ_CP016191.1|WP_065209234.1|403507_405655_+|hypothetical-protein
MAIQRISTQHSERLNPDQYWPQWDEDGYIEAANSQAANAQKAFQSGEAVAVQASGVVSQTMEGQTADAAMARFASDGAKLENRGGVHSSNATINGLMAQNVANRKASINFLLANHEADVEAIKATAVAQGWTQNELQDEVARADDGYRQQIETVATNSDQAHEELKGQLNTGEAPSAPASMPGGVPGEGSPKLDGLDPEVEKAVSSAMGTGGGMGDMSQMAGMASGLLSPLTGALQSPPGADMLNQAGQQGFQMGQQALQALLGQGGGAAELTPDQVEELIAGQGGDSTDGLPGGNDPSAAPSSDEGPKFENPDRPAETPAAETKTDTAKADADTKTEPAAAAAPSPAAEPVSAAPPTSAMHPTTELSGDSGVATAPAPATNLSGAGAAPMGGTATLGAPGMGAAAGGFAGAPAGGMGGGFGAPMMGGAPMMGGAAPQAGAPARGAAPVATATSADQRISAATLSAPVTDPREGNPATANASQAAPVAAVAPVTAGASRVADRHVVQVRRVMAHLLGEYRRVGLAGDLAIGVLKDGTFVYATWDGLGFLPHGVRLPANVIPLSEFPLSPLFRQDFVAYAPGALIAVAAELQLIPEVSVIFTTNSEDVGITVTAADLRGLTLPNATIERTAFQTLPVEEHENAAKLTRMVWEIGDLPDMATITADLRGVRGTAYANRVLAAYLLADASRFEGTAEAGYALHQALWLPSPLDEQQPV
>NZ_CP016191.1|WP_079673336.1|402682_403348_+|hypothetical-protein
MATGGRIEVQADETGGRALAQQMVNALPSGVTEIEYDTEELLDQAADWQAKADLLRELAPEAREITEWAEGASGEFKSEYETPGVYNNTYTDCGTGSDRIEKEVTKLADDIERWAQSIQWMAENMEEVQKIAANRTEQIDADVSGGAGSGSAVDESARKVDVLSDSGETASQSSPMPPTYDGGSTPVVGADPQSAPAAPTLDGSSAPVVGSRSVDGGTTEI
>NZ_CP016191.1|WP_065209232.1|401302_402652_+|hypothetical-protein
MAAESIDSLFDLDDDTDNGASAAVVTAPAPAPAPAQATAAKADEPKPTDTDDPLRKASEPFIPQPVVNDAPPPGFESRVEEHEPTFHDVDADDISKVANDDRYGDCAPDPFASNNVTPDLVNKNDGAPTTAPESDDDDLPPWERDRKEREKREQEEREAMRRAHEEAISEGSMTLPGESDEQLGGFADDTGSGSGSRADFIRAKVANNGLVEKSKDFVKRNPRPVIVGVIGLVALLVMAVVLPAGDPASEPAPPAALPPDVAVEVPADPSLGEPVTLLPRTVAADCGPGQTNPALAFNNNQQDAWICPRAHGIDGAIMNIQFKNTVQVVSVTVMPGWNYVAPNGRDRWNEHRVVTRIRWRAGGKEFIHNIDPTRAGSTFTFNPPKGVATNEMSLTIFATERPNAAGAEVDPETGGGGILPPILGGGDGGADVDRTFAIGSIVINGYELG
>NZ_CP016191.1|WP_065209231.1|401064_401313_+|hypothetical-protein
MRRPRPYNPDPDTLRLLDEFRDVSAESRAHAQALSEFRQRRAEIVRQLIGRGLTYRRIAAEVGVSKSFIQALGATEGAANGC
>NZ_CP016191.1|WP_131831763.1|400798_401068_+|hypothetical-protein
MTDIREAVDAGVTATEAFGARRGGLVGVWLDDPDRPGVSAFVNQGRLTRLVIPQAYMGMRREELEAVINAVIINAHLDASPAIRARSAA
>NZ_CP016191.1|WP_065209240.1|410872_412297_-|transposase
MTTAAPTETVLRGYRFVLDPTPTQAEMFESHAGGARFAYNHMLARVKANLSQREAERSYGIPDEELTPALGWSAKDLNDAFNAVKDADAPWNRENSSRIYLYATRDLAQALKNWSDGKKGARRHMGFPRFHSRRSRKSFTFTATDKTLLDTRHHVKLPKIGVVHTLESTRRLYRLIEQGRAKVKTATVSLHRGRWQVSILAEITRAVTPQRKQPRVVGIDLGVKDWIVAATPDGAEVLRVPFPAELKKLDERKRKLQRRYRNRQRGDKRTGQQASNRWRQAQKRINKVDYKMAAIREDMLHKATTGLARLFDVVVMEDLNVAGMKTRGGAHKRGLNRALQQSGMAMTRTMMSYKASELILVDRFYPSSKRCSSCGETKAKLTLGERVYRCGNCGLETDRDLNAAINLARQADVHMAESPSVSARGAERKPAKPSGAAAAGDEARSRRRQRQSVGVTGNGGTSPRTQLNEEHSAA
>NZ_CP016191.1|WP_065209241.1|412293_412521_-|helix-turn-helix-transcriptional-regulator
MNDTAANNEQRDAIARLRAAEEQYRTAKEAARTARDARNEAIRTARRTGVHQTVLAEVIGVKRAMISNIEHGRRS
>NZ_CP016191.1|WP_065209242.1|412708_413095_-|hypothetical-protein
MTVTAHATRTADGWWAVTVPEIEGLHTQSKRLDRVREMVVDAAKVLGVEITADDVTVVRRLTDAELQRRVDETNALRAQLAELQRRVAEETRETALALHRTGMTVRDIAVFLDLTPGRIGQLVSGADD
>NZ_CP016191.1|WP_131831762.1|413265_414000_+|hypothetical-protein
MMTSKSVKYITAGLAAAAVLVLPACSNQVNTTAAEDIPVTKVTVTTSTAPAAEQAPIPTPTIPRASDRYAELDGVVRDAAADAKMMWERATGVKLPSLTVVPEGDPAASRCINDDPLSLMWACDSGVIVYRPAMLKQRMDAGGIGPVMVYTSHEVAHIGMAANGFGAGETSHREEKAAMCGAGAYMRYVVEGKSKEDFTSSRDGALEAGLKSYPLDGSYVSTDVAKDFLAKYREGFDSGQLCIG
>NZ_CP016191.1|WP_065209244.1|414031_414310_-|hypothetical-protein
MTARLVVIAAVAIAFIAGIAAAVMILTGDDAADAVTAAAVPVNPEKVSVTRHVETTMTSDAIESAYAAVQAFKQQDTGRTCTQISPLAKRCD
>NZ_CP016191.1|WP_065209245.1|414570_415044_+|helix-turn-helix-domain-containing-protein
MTSDDLMTTGEAAARLGVSRQTVVNLCEQGKLPSVRAGSHRRVPRDAVESYDLQRRGWETDGHQKSLALHALVVGELLRDPERVRAKARRNLRRFPEDADTHRRRWEELLDEPLPVLITAMLDTSDTGVTLRAHTPFAGVLNAEDRARVNRAYRATR
>NZ_CP016191.1|WP_065209246.1|415117_415447_-|hypothetical-protein
MTSETNNSEARDYLTRMGLAFRYQTRPALDPVRTLGVNHPERFALLTSAWQRCLDAARTVHSRYEEDRNSSGPLSEIAVEVRNCALSGLARTWEHLVDGYLSDIAEADQ
>NZ_CP016191.1|WP_065209247.1|415472_415970_-|DUF732-domain-containing-protein
MIIRALSVVVAASLIGVPATVSAETPEDMFIGLMVQEGVPFDSREDALRRGWSACDRLGEGVTLQQMVDEAARNGGDTRSAYILPHLAASTLCPEHGWRVFGNGTPEPIPAPEPVPAPAPKPAPKTAYYPNCAAAKAAGAAPLHRGDPGYSSKLDRDGDGVACEK
>NZ_CP016191.1|WP_065209248.1|415966_416914_-|hypothetical-protein
MTRSIPWTPPPEVTEIGSHTYLIETDDLTGLLDLHGDGTATFRDHHVRLREDDSAYPFSYWNRINTDLKNGYHVTHLESVDDVPVYVINRNGTPDFRNTSPYCPFEVEAQDLTRAEAVDWVTVSRAVRAAGKSIAHLKDALNGSHKYFGVKARTEMLPSELLRKVTREVVIGPFTTSPHRKHLPGFGLQGFGALSGTGLVDDHAAHLAAAITVGGVLTPFMFSPDGPFRDNMKRLTDLVLSVEEHLLANGRSTRALPQTLRFAVGEAKAARRRECEFLDMSVVSVDRAREFALLRDDLPDMPDELVEALMGGDTP
>NZ_CP016191.1|WP_079640361.1|416910_417576_-|hypothetical-protein
MCCTDGASTMTTPVIPFARDTRVVPILTAEDAARFWDRVQVNDGGCWVWTGAVGHNGYGNFYVSGAGTYRAHRVSWVWANGDVPHGFDLDHAVCRNKVCVNPEHLEVVTVNVNTWRGQGHFWSRDMQTLIRRVLFAKGDIDTNTFTTAAVQLLLNLGPSSVKRACSIGELRAHKGEGLDKRRYTPQWHIDRADLIDFIINRAAEDAGAPVLRALITERTAA

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Crispr_ID: NZ_CP016191_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016191_3

4582179-4582273

Orphan

Consensus_repeat	Method
GCCAGCCCGCTGAACCCCAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016191_3

>merge|NZ_CP016191|3|4582179-4582273|CRISPRCasFinder
GCCAGCCCGCTGAACCCCAACAACCCCGCCAACCCGGCCAGCCCGCTGAACCCGAACAACCCGGCCAATCCCGCCAGCCCGCTGAACCCGAACAA

>NZ_CP016191|3|3|4582179-4582273|CRISPRCasFinder
GCCAGCCCGCTGAACCCCAACAA	CCCCGCCAACCCGGCCAGCCCGCTGAACCCGAACAACCCGGCCAATCCC
GCCAGCCCGCTGAACCCGAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016191.1\|WP_005071727.1\|4579200_4579620_+\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP016191.1\|WP_005071725.1\|4576493_4578764_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|235367
NZ_CP016191.1\|WP_005071732.1\|4583484_4584150_+\|glyoxalase	unknown	unknown	gnl\|CDD\|372667
NZ_CP016191.1\|WP_062914965.1\|4585964_4586756_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181131
NZ_CP016191.1\|WP_005063831.1\|4580255_4581845_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|235731
NZ_CP016191.1\|WP_005138247.1\|4571863_4572781_+\|methylisocitrate-lyase	unknown	unknown	gnl\|CDD\|131370
NZ_CP016191.1\|WP_074360002.1\|4573970_4574651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_005103161.1\|4582335_4583433_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274934
NZ_CP016191.1\|WP_005071720.1\|4572777_4573899_+\|bifunctional-2-methylcitrate-synthase/citrate-synthase	unknown	unknown	gnl\|CDD\|237590
NZ_CP016191.1\|WP_005071728.1\|4579609_4580212_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP016191.1\|WP_016343627.1\|4585012_4585873_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224332
NZ_CP016191.1\|WP_005112528.1\|4586768_4587842_+\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|226326
NZ_CP016191.1\|WP_005071722.1\|4574895_4575426_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP016191.1\|WP_005063840.1\|4588551_4589805_+\|NADH:flavin-oxidoreductase/NADH-oxidase-family-protein	unknown	unknown	gnl\|CDD\|240084
NZ_CP016191.1\|WP_005101757.1\|4584159_4585008_+\|DUF2510-domain-containing-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP016191.1\|WP_005138245.1\|4570361_4571867_+\|MmgE/PrpD-family-protein	unknown	unknown	gnl\|CDD\|224990
NZ_CP016191.1\|WP_074292112.1\|4589735_4590218_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|281995
NZ_CP016191.1\|WP_005071723.1\|4575487_4576375_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016191.1\|WP_005063839.1\|4587838_4588429_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP016191.1\|WP_005120026.1\|4590283_4591348_+\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|238341

Protein	Function_ID	Function_description	E-value
NZ_CP016191.1\|WP_005071727.1\|4579200_4579620_+\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	2.31723e-22
NZ_CP016191.1\|WP_005071725.1\|4576493_4578764_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
NZ_CP016191.1\|WP_005071732.1\|4583484_4584150_+\|glyoxalase	gnl\|CDD\|372667	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	1.98773e-08
NZ_CP016191.1\|WP_062914965.1\|4585964_4586756_+\|SDR-family-oxidoreductase	gnl\|CDD\|181131	PRK07814, PRK07814, SDR family oxidoreductase.	2.078e-153
NZ_CP016191.1\|WP_005063831.1\|4580255_4581845_-\|AMP-binding-protein	gnl\|CDD\|235731	PRK06188, PRK06188, acyl-CoA synthetase; Validated.	0
NZ_CP016191.1\|WP_005138247.1\|4571863_4572781_+\|methylisocitrate-lyase	gnl\|CDD\|131370	TIGR02317, Methylisocitrate_lyase, methylisocitrate lyase. Members of this family are methylisocitrate lyase, also called (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase. This enzyme acts in propionate metabolism. It cleaves a carbon-carbon bond to convert 2-methylisocitrate to pyruvate plus succinate. Some members of this family have been annotated, incorrectly it seems, as the related protein carboxyphosphoenolpyruvate phosphomutase, which is involved in synthesizing the antibiotic bialaphos in Streptomyces hygroscopicus.	1.72028e-143
NZ_CP016191.1\|WP_005063839.1\|4587838_4588429_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.72256e-07
NZ_CP016191.1\|WP_005071728.1\|4579609_4580212_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.85926e-07
NZ_CP016191.1\|WP_005103161.1\|4582335_4583433_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274934	TIGR04036, family_protein, putative luciferase-like monooxygenase, FMN-dependent, CE1758 family. This tightly conserved subfamily of the bacterial luciferase-like monooxygenase (LLM) family, with members showing > 60 % pairwise sequence identity, includes proteins from both species with and species without the ability to make coenzyme F420. Therefore, the like cofactor is FMN rather than F420. The presence of three members in Kineococcus radiotolerans SRS30216 and two in Saccharopolyspora erythraea NRRL 2338 suggest closely related (subfamily) rather than exactly conserved (equivalog) function. Gene neighborhoods around members are not conserved. [Unknown function, Enzymes of unknown specificity].	2.09098e-76
NZ_CP016191.1\|WP_016343627.1\|4585012_4585873_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.90611e-09
NZ_CP016191.1\|WP_005112528.1\|4586768_4587842_+\|diacylglycerol-kinase	gnl\|CDD\|226326	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown].	2.24659e-114
NZ_CP016191.1\|WP_005071722.1\|4574895_4575426_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.65024e-30
NZ_CP016191.1\|WP_005063840.1\|4588551_4589805_+\|NADH:flavin-oxidoreductase/NADH-oxidase-family-protein	gnl\|CDD\|240084	cd04733, OYE_like_2_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	9.42384e-165
NZ_CP016191.1\|WP_005101757.1\|4584159_4585008_+\|DUF2510-domain-containing-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	2.65198e-41
NZ_CP016191.1\|WP_005138245.1\|4570361_4571867_+\|MmgE/PrpD-family-protein	gnl\|CDD\|224990	COG2079, PrpD, Uncharacterized protein involved in propionate catabolism [General function prediction only].	7.01114e-146
NZ_CP016191.1\|WP_074292112.1\|4589735_4590218_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|281995	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase. This family of proteins is found in the genera Mycobacterium and Streptomyces. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. Rv1558 is an F420H(2)-dependent quinone reductase involved in oxidative stress protection.	4.00501e-11
NZ_CP016191.1\|WP_005071720.1\|4572777_4573899_+\|bifunctional-2-methylcitrate-synthase/citrate-synthase	gnl\|CDD\|237590	PRK14033, PRK14033, bifunctional 2-methylcitrate synthase/citrate synthase.	0
NZ_CP016191.1\|WP_005120026.1\|4590283_4591348_+\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	1.66003e-113

>NZ_CP016191.1|WP_005063831.1|4580255_4581845_-|AMP-binding-protein
MPDPFDPLHGSINSGHLLVSALKRNRDAPALVLGDVTLTGAQMADEISKYIQAFIELVPDPTDGQGMLALNRPEVLLVIGAGQLLGTRRTALHPLGSLDDHAYVLADAKITTLVIDPTPQFVERAAALVAKVPTLTRVLTLGPVPVELAEVGQDLVAAAAGFAARPLTPINLSPDHINGLTYTGGTTGKPKGVIGTSQSILTMTQIQLAEWEWPERPKFLMCTPLSHAGAAFFMPTLMKGGSMVVLPKFDAGAVLAAIEEHQITATMLVPSMIYALLDHPDSRTRDLSSLQTVYYGASAINPVRLAEAIERFGPIFAQYFGQSEAPMVISYLAKGDHDAKRLSSCGRPSAFLRTALLDENDRPVKQGEPGEICVAGPLVAGGYWGLPEQTAETFKNGWLRTGDVAREDEDGFWFIVDRTKDMIVTGGFNVFPREVEDVVAEHPSVAQVGVIGVPDEKWGEAVTAIVVLRSDASSDEEAVALMTSEIQSAVKERKGSVQSPKHVIVADSLPLTALGKLDKKALRQKYTTV
>NZ_CP016191.1|WP_005071728.1|4579609_4580212_+|TetR/AcrR-family-transcriptional-regulator
MGRKPQYSADDILDAALGLVAAGGPSAATATAIGRVLGAPSGSIYHRFPSRDELMARLWLRSIARYQDGVLAALALPDADDALAAAIDHAFDWTASNHNEALLLLQYEKADLVAHWPDTLATELKTLNSRVRKTLREYTDRRYGEVTTERIDKVMFALIDMPYAAVRRHLPDKGQPAPWLREFVHASAHALLARACPNKP
>NZ_CP016191.1|WP_005071727.1|4579200_4579620_+|PaaI-family-thioesterase
MITLDQAQQVLDAQPFSRLLGAAITRVDERGIQLSLQIRDELRQQSGFIHGGVLSYLADNAITYACGLGLGADIVTSGYTIEYVAPARDGARLVADASLVSAGRTKALGRCEISVEDHDGTATLVAVAQGTSMVRRSGT
>NZ_CP016191.1|WP_005071725.1|4576493_4578764_-|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MTTQPLKATTLGSARIGPRRELKRATESYWAGRISRVELEDVAAGLRRDNWTALAAAGLDSVPVNTFSYYDQVLDTAVLLGALPPRVAGIADDLDRYFAAARGNTDVTPLEMTKWFDTNYHYLVPEIGPDTQFTLNPAKLFGELKEAQALDVPARPVVVGPITFLALSKSVDGASAPIERLDEVVALYEQLLVQLAEAGVGWVQIDEPVLVTDILPNGPELAERVYGRLGTVADRPAILVASYFGELGAALPALARTPIEAIAVDLVYGSASAVASVPELAGKTLVAGVVDGRNIWRTNLQSALGTLASLLGSAESVAVSTSCSTLHVPYSLEPETELDDQLRSWLAFADEKVKEVVVLARALGEGRDAVAAEIAASNAAAESRRTDPRLNNGQIRTRLDAVLADGVSRGDAAERRRRQDERLRLPALPTTTIGSFPQTVEIRKARQALTRGEIDDVEYVRQMRAEVADVIALQEKLGLDVLVHGEPERNDMVQYFAEQLDGFFATQNGWVQSYGSRCVRPPILYGDVARRKPMTVEWATYAQSLTQKHVKGMLTGPVTILAWSFVRDDQPLGDTANQIALAIRDETVDLQNAGIAIIQVDEPALRELLPLRNSEKQAYLDWAVGAFRLSTSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDLNAIGFSNSVGPGVYDIHSPRVPSTEEMATSLREALKAVPAQRLWVNPDCGLKTRKVDEVTSSLANLVAAAASVRADA
>NZ_CP016191.1|WP_005071723.1|4575487_4576375_-|hypothetical-protein
MNTVALEMVPPNVDGGLDRAADELRKLRQFSAEFGIDRRIAHVMIPSMIVEDGDRPLEMKPKLDVVDYWSIIRAELPAVRGLCTQVTSFSDETSLRGRLTDLTDAGMDGVIFVGVPRTMNDGDGAGIPPTDALSKFDDIVQNRGAILIPTRAGEQGRFSFKCDKGANFAMTQLLYSDAVVGFLHEFAHTSDHRPEVLLSFGFVPKLESKIGLIDWLIQDPGNEAVAREQDFVKALAAREPGERRPQLVDLYKRVVDGVAGLGFPLSIHFEAPYGLARPAFETFAEMLEYWSPAVS
>NZ_CP016191.1|WP_005071722.1|4574895_4575426_-|GNAT-family-N-acetyltransferase
MEPVELQTDRLMLRAVADADAAAIVDACNDPEILHYLPLPVPYTVGDARSFIAASTQEWAAGTRYGFGFFVMDTGELAGTCSLKPVTSGVLEVGYWSAAQHRRKGLTTEAVQRLCQWGFDVLDAHRIEWWAVVGNEGSRAVAEAAGFEMEGLLRQRACRRQEPADWWVGGLLPRPE
>NZ_CP016191.1|WP_074360002.1|4573970_4574651_-|hypothetical-protein
MASAAAVDWDEGREIIRFPYGCAGWDPALGDPAQRLVTLWATWHKGQNWPRLLGVVEELYDVSAVSYRDESDCIRCRPSSFQYRSVELATRWPEESSRGEPGRRVITGCVVGLRVISVVEPADADIQARQEERDRARRTLDLFGPPGVFGAVIPSRGDRVTVDLADPRLSVNDTRGYAGVVTGIAGQVSRAVHSPDGFYTGLLDINSEAPPPDELFIQLLCDRKPE
>NZ_CP016191.1|WP_005071720.1|4572777_4573899_+|bifunctional-2-methylcitrate-synthase/citrate-synthase
MTISTPTIHKGLAGVVVDTTAISKVVPETNSLTYRGYPVQDLAVQCSFEQVAYLLWHGELPNEGELALFNQRERAQRRLDRSLMALLAKLPETCHPMDVVRTAISYLGAEDPSEDDNTPDANYAKSLRMFAVLPTIVASDMRRRRGLDPIQPHSHLGYSANFLRMCFGEIPDPAIVKAFEQSMILYAEHSFNASTFAARVVTSTQSDIYSAVTAAIGALKGSLHGGANEAVMHDMIEIGDASKASEWLQSKRSRKEKIMGFGHRVYKNGDSRVPTMRAALEDVARVRDGGQWLEIYKVLESEMDAATGIKPNLDFPTGPAYYLMGFDIPCFTPIFVMSRITGWTAHIMEQAAANALIRPLSEYSGKPQRRLAC
>NZ_CP016191.1|WP_005138247.1|4571863_4572781_+|methylisocitrate-lyase
MSTLLASATDAATKRAAFRQGLSSGELLRLPGAFSPLVAKLIEEIGFEGVYVSGAVLSADLALPDIGLTTLTEVSARGRQIASVTDLPTLIDADTGFGEPMSAARTVAVLEDSGVAGLHLEDQVNPKRCGHLDGKAVVETAEMVRRLHAAVSARRDPNFVICARTDAAGIEGLPAAIDRARAYADAGADLIFTEALTDIGEFEKFRAAVDIPLLANMTEFGKSELVTADRLREVGYNVVIYPVTTLRLAMYAVEQGLHEINSAGTQSGLLEQMQHRSRLYELLHYAEYNRFDTEIFNFSLDGGQQ
>NZ_CP016191.1|WP_005138245.1|4570361_4571867_+|MmgE/PrpD-family-protein
MHVHSVRTRRSAEAFPRDQHLAWKIAEIASDPVAVPADTAAMVINRVIDNAAVSAASVIRRPVTVARRQAQAHPAAPGAHVFGIGGGYSAEWAAWANGVAVRELDFHDTFLAADYSHPGDNIPPLVAVAQQLGIGGDDLIRGLATAYETQINLTRGICLHEHKIDHVAHLGPAVAAGLGTMLKLDTETIYQAIGQALHLTTATRQSRKGLISSWKAYAPAWAGKVAIEAVDRAMRGEGAPSPIWEGEDGVIAWLLGGPEKLYKVPLPGPGEEKRAILDSYTKEHSAEYQSQAPIDLARRMRERIGDLEQIATIVLHTSHHTHVVIGTGSNDPQKFDPDASRETLDHSVMYIFAVALEDGTWHHERSYAPERAHRPETIELWNKISTIEDPEWTRRYHSTDPDEKAFGCKAVVTLKNGEVIADELAIADAHPLGARPFARDNYVNKFTVLSDGVIAPREQERFLSVAQGLADLKPGSLGALNPLVDAVVLDKAPTTPEGIFK
>NZ_CP016191.1|WP_005103161.1|4582335_4583433_-|LLM-class-flavin-dependent-oxidoreductase
MRFQLLDIVFHLPNPATRALAPAAERLNRVIETAVLAENLGFDSFAVGERHAGDVLSSAPTVLLGAVAAATDRILLSTGVTVLSLLDPVRAAEDFATIDQLSRGRLEIVIGKGNEDRQYPLMGLDIAKQYEYLQENYELLRRLLREEHVDWVGAHRHPLADATTLPRPYDGPFRIWHGSATSTFAVELAAKWGDPIVTANALQPKENYRVLIDRYRELYAHHGHDPAQLYVGAGSGGLYLADTTEQAIAQYRPIYEARLAQMAKLKAHPQAVGKFPSFESIEDAADRGPVLAGSPERVAEKILDWHEAFGHEFQSISLSPEADFEEQKDTLRRFAEEVVPLVRAEVKSTLWGPLDTRRAKGFTAV
>NZ_CP016191.1|WP_005071732.1|4583484_4584150_+|glyoxalase
MITELDSVLLDVPNLGEAKAAYSRLFNSSAPHPQLHLGLPEWASHPGMLFRVDHLDCAARTVARRGLALTVHGDLATGASNGVTLGLSGQPPAAPQPDADSCRIDHLVLFSPNRDRIIATLCGRLGFDLRLDRLQSWGAHQLFFRGAGLVVEVVLRDDDPSGPDSLWGIAWRTADIEASHARLSGAGATLGDIRNGHKPGTRVVTVKDPALAVPTILIEQR
>NZ_CP016191.1|WP_005101757.1|4584159_4585008_+|DUF2510-domain-containing-protein
MTTPNSGSWQPDPDGRYEFRWHDGQRWTDQVAHQGSVSTAPLGGAATQPAAPDQPAGNQFSGISGDLVDGRFSENEAKPISNQNAKLLRVRLGEPFLARQGSMVAYQGNVDFAFEGGGAAKFLKKALTGEGLPLMRCSGQGDVFLAERAFDVHLLNLNNAGLSISGKNVLAFSAGLNWNIERVRGASVVTGGLFNTTLRGTGWVALTTDGPPVVLNAAEAPTFADTNAVVAWSSNLQTQLKTSFKAGALIGRGSGEALQVSFQGQGFVIVQPSEGIPVVTAG
>NZ_CP016191.1|WP_016343627.1|4585012_4585873_-|helix-turn-helix-domain-containing-protein
MPASSPPTARVVRIVEMLAAAMQPKTVSEIAASTGISRATATAVVNELEAAGWVARDDELRYRIGASLPRAVDTSMPREAQQLLARIAAEAQAGVTVSCISAKALTVVAKAQAGRRAVTGFAVGQSIPLAFPAGSAVMPWRAAEEREQWLGTAAGLSARSGQRLLQQVSDCGYVVYRPDHDDTGMVDLLSDLLGSVGSEVMEAALRERLLRQLSRLTSRPYSPDELTSDEVLPISYLAAPIFDGAEARYELQLGPLLPRATRVVREALIATLMRGARELSGVLGDR
>NZ_CP016191.1|WP_062914965.1|4585964_4586756_+|SDR-family-oxidoreductase
MILDRFKLDGNVAVVTGAGRGLGAAIAEAFAQAGADVLIASRTESQLREVAEKVQAAGRQAEVVVADLSDTEASAALAQKAVDRFGRLDVVVNNVGGTMPKPFLDTTNDDLAEAFSFNVLSGHALLRAAVPHLLKSDNASVINITSTMGRLPGRAFLGYCTAKGALAHYTRTAAMDLSPRIRVNGIAPGSILTSALEVVAGNDEMRNTLEQNTPLHRLGDPADIAAAAVYLASPAGSFLTGKVLEVDGGLIAPNLDIPLPDLA
>NZ_CP016191.1|WP_005112528.1|4586768_4587842_+|diacylglycerol-kinase
MTKTRVAVWGTGNVGQHALAGVITDPSMELVGVWVSGSNKAGKDAGALAGLDILTGITATTDAAQILALRPDCVVYTAMTDNRLMEALKDLTDLLSAGINVAASAPVFLQYPWGVLPENMLTPIENAAREGNSSIFAGGIDPGFANDLLPLALMGTCQRIDQVRCIEIVDYATYDSATVMFDVMGFGKPMEETPMLLQPGVLSLAWGSVVRQLAAGLGVELDEVTEVYEKLSAPEDFDISSGHIPAGTMAALHFEVRGIKDGRAVTVLEHFTRLREDLAPNWPQPAHEGGTYRVEITGEPSYLLDLGSFSARGDHNYANLIATAMRVVNAVPAVVAAEAGIRTTLDLPLITGKGRAV
>NZ_CP016191.1|WP_005063839.1|4587838_4588429_-|TetR/AcrR-family-transcriptional-regulator
MSARDTLIASVTGLVRRRGVAGTGLNALLEDSGVSRRTIYLNFPGGKQELVAEATRLAGNELTAIIKAAGDDVDPARGIQLFIELWKAQLAETEMQAGCPVVAAVLGRTEAPEAAAVAADAFESWRKILIDRLARYDVDGETARSLASTMIAAIEGAVIMSIAAQSTEALDDVGQRLVELVRLYVPAGAKPNPHVD
>NZ_CP016191.1|WP_005063840.1|4588551_4589805_+|NADH:flavin-oxidoreductase/NADH-oxidase-family-protein
MPDIHDPLPLANGQVLRNRLMKSALSEALGNAEQGPDHRLVQLFSRWGAGGYGLIVTGNVMVDHNHLGEPGNVVIEDDRHLEGLSRWAKATKDGGGLIWMQVNHPGRQANPLATKHQPVAPSAVRMSVPGWQAPRELTDVEIEDIIDRYARTAVVADTAGFDGVQIHGAHGYLVAQFLSPNTNRRTDRWGGDAQRRMRFVLEIVRRTKAAVSPGFAVAIKLNSADFQRGGFTEEESRGVIAALAAEGIDLIEISGGTYESPAMEGRPVVVSTSTQAREAYFLEYATTARAVAGDVPLAVTGGFRTTAAMNEAIESGACDVIGLGRPTTVNPEAAIELLSTRRDRLTVPDAALPLPARLAATARAKAFLSAHELQWHGTQMHRLGAGSDPDPSIGPWITALRLLKNNGVEAFRKRRSS
>NZ_CP016191.1|WP_074292112.1|4589735_4590218_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MDHGLAAPQEQRRRSIPKKEKFMTDKTLRKFRRERAMGRYLLNPAVGALAKLGVRTALASELETTGRRTGQLRRVPVSVQFDSTGAWVICQHGTRSGWGSNIAANPNVRIRQGNRWRTGTAQFRPDDDVVARGRGFGVIGARVVKALETTPISVRIDFTD
>NZ_CP016191.1|WP_005120026.1|4590283_4591348_+|galactose-1-phosphate-uridylyltransferase
MWRTRRELADGREILYFDSTPTERAAVDRRDLPPVSTQSQIRFDPLLGDWVTLASHRQTRTFLPPTDLCPLCPSTPERPTEIPEHAYEVVAFENRFPSLSLHAQAATPPAGAGFGRCEVLCFTSEHDTSFAQLEPRRARLIVDVWAERTKELSAIDGVKQVYCFENHGEEIGVTLAHPHGQIYAYPFITAKTARVLSNVDTHRKQHGTNLFGEILAAERATGTRVVTANDEWTAFVPSFARWPYEVSLYPHRQVADIPDLDDAARSAFAELYLDVLQRFACRFDNPMPYIAGWNQAPTVASGAIRDNWWLHLQVFSIRRAPGKLKYLAGSESGMGAFISDTTPEQVAAELRDVM

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016191_2	2.1\|410675\|32\|NZ_CP016191\|PILER-CR	410675-410706	32	NC_031107	Erwinia phage vB_EamM_Asesino, complete genome	140480-140511	8	0.75
NZ_CP016191_2	2.1\|410675\|32\|NZ_CP016191\|PILER-CR	410675-410706	32	KM463009	Mycobacterium phage Power, complete genome	50977-51008	10	0.688
NZ_CP016191_2	2.1\|410675\|32\|NZ_CP016191\|PILER-CR	410675-410706	32	NC_029043	Mycobacterium phage SweetiePie, complete genome	50766-50797	10	0.688

1. spacer 2.1|410675|32|NZ_CP016191|PILER-CR matches to NC_031107 (Erwinia phage vB_EamM_Asesino, complete genome) position: , mismatch: 8, identity: 0.75

-----ctgtggaccggtgaggagctgactgagcactt	CRISPR spacer
ttcatctggggg-----gaggagctgtctgagcactt	Protospacer
     *** **.     ********* **********

2. spacer 2.1|410675|32|NZ_CP016191|PILER-CR matches to KM463009 (Mycobacterium phage Power, complete genome) position: , mismatch: 10, identity: 0.688

ctgtggaccggtgaggagctgactgagcactt	CRISPR spacer
acggcacgcggtgaggcgctgcctgagcactg	Protospacer
 .*  .  ******** **** *********

3. spacer 2.1|410675|32|NZ_CP016191|PILER-CR matches to NC_029043 (Mycobacterium phage SweetiePie, complete genome) position: , mismatch: 10, identity: 0.688

ctgtggaccggtgaggagctgactgagcactt	CRISPR spacer
acggcacgcggtgaggcgctgcctgagcactg	Protospacer
 .*  .  ******** **** *********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1765541 : 1778187

Mycobacterium_virus(27.27%)

transposase,integrase

attL 1768136:1768152|attR 1772333:1772349

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005119684.1\|1765541_1766225_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-34	35.9
WP_005060475.1\|1766221_1767238_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_024571060.1\|1767234_1768797_+	DUF4173 domain-containing protein	NA	NA	NA	NA
1768136:1768152	attL	NA	NA	NA	NA
WP_079620778.1\|1769080_1770163_+\|integrase	site-specific integrase	G8IR34	Mycobacterium_virus	1.1e-90	47.2
WP_005122188.1\|1770159_1770795_-	DUF732 domain-containing protein	NA	NA	NA	NA
WP_052537811.1\|1770972_1771215_-	hypothetical protein	A0A068F2J1	Mycobacterium_phage	5.1e-25	69.9
WP_065209289.1\|1771211_1771433_-	hypothetical protein	NA	NA	NA	NA
WP_005122194.1\|1771471_1771678_-	DUF3263 domain-containing protein	Q854V6	Mycobacterium_virus	5.8e-14	58.0
WP_005122196.1\|1771665_1772022_-	hypothetical protein	A0A0A7RVS8	Mycobacterium_phage	1.7e-48	76.3
WP_050886715.1\|1772238_1772508_+	hypothetical protein	NA	NA	NA	NA
1772333:1772349	attR	NA	NA	NA	NA
WP_065209290.1\|1772834_1773596_-	hypothetical protein	A0A159B6J8	Gordonia_phage	2.9e-18	42.1
WP_065209291.1\|1773798_1774494_+	phage antirepressor	A0A2H4PF12	Gordonia_phage	2.3e-62	54.1
WP_079486004.1\|1774523_1774811_+	helix-turn-helix transcriptional regulator	A0A159B6K1	Gordonia_phage	1.5e-15	67.7
WP_109420435.1\|1774807_1775785_+	hypothetical protein	NA	NA	NA	NA
WP_032668141.1\|1775930_1776653_+	hypothetical protein	G8I4X5	Mycobacterium_virus	1.6e-45	40.6
WP_005129929.1\|1776654_1776954_+	hypothetical protein	A0A088F7N3	Mycobacterium_phage	1.9e-29	66.0
WP_099156389.1\|1777024_1778187_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.2e-24	28.0

DBSCAN-SWA_2

1781924 : 1801257

Mycobacterium_phage(55.56%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079729071.1\|1781924_1782557_+	hypothetical protein	G1D0U2	Mycobacterium_virus	3.4e-20	35.5
WP_079670803.1\|1782553_1784173_+	site-specific DNA-methyltransferase	A0A2P1JRA9	Mycobacterium_phage	1.6e-194	63.3
WP_062914868.1\|1784312_1784876_+	hypothetical protein	A0A160DEM6	Gordonia_phage	2.9e-47	44.8
WP_062914869.1\|1785356_1786145_+	hypothetical protein	A0A142KB23	Gordonia_phage	1.5e-54	48.3
WP_062914870.1\|1786141_1786915_+	hypothetical protein	A0A222ZKS9	Mycobacterium_phage	2.6e-22	34.3
WP_062914871.1\|1786911_1787265_+	hypothetical protein	A0A2L0HJY8	Mycobacterium_phage	1.9e-28	57.1
WP_062914872.1\|1787363_1787549_+	hypothetical protein	NA	NA	NA	NA
WP_074359886.1\|1788983_1789766_+	hypothetical protein	A0A2D1GG45	Gordonia_phage	2.2e-16	47.5
WP_032670028.1\|1789995_1790214_+	hypothetical protein	G1JX72	Mycobacterium_phage	2.1e-09	47.4
WP_005067380.1\|1790210_1790540_+	hypothetical protein	NA	NA	NA	NA
WP_062878846.1\|1791201_1791450_+	WhiB family transcriptional regulator	A0A097EWF7	Mycobacterium_phage	2.4e-14	50.0
WP_065209293.1\|1791449_1791764_+	WhiB family transcriptional regulator	A0A1B0XUI6	Freshwater_phage	2.4e-14	50.0
WP_005068429.1\|1791885_1792692_-\|transposase	transposase	U5N3V8	Enterobacteria_phage	2.7e-54	44.2
WP_024571251.1\|1792691_1793936_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_131819820.1\|1794343_1794628_+	hypothetical protein	NA	NA	NA	NA
WP_131819819.1\|1794620_1794923_+	hypothetical protein	NA	NA	NA	NA
WP_062914877.1\|1794919_1795186_+	hypothetical protein	NA	NA	NA	NA
WP_062914878.1\|1795189_1795867_+	hypothetical protein	M4WA13	Mycobacterium_phage	4.0e-67	55.0
WP_062878852.1\|1795901_1796159_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_062878853.1\|1796240_1796501_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2P1N333	Gordonia_phage	6.0e-16	51.2
WP_024571076.1\|1797208_1797553_+	hypothetical protein	NA	NA	NA	NA
WP_079633922.1\|1797591_1797825_+	hypothetical protein	A0A088FBL5	Mycobacterium_phage	2.5e-05	92.3
WP_005115852.1\|1797821_1798097_+	hypothetical protein	NA	NA	NA	NA
WP_079851415.1\|1798750_1799185_+	HNH endonuclease	A0A2R4AQA4	Mycobacterium_phage	2.3e-20	43.0
WP_099156389.1\|1799232_1800394_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.2e-24	28.0
WP_076984184.1\|1800583_1800859_+	hypothetical protein	A0A222ZPK3	Mycobacterium_phage	4.9e-08	41.1
WP_005067440.1\|1800894_1801257_+	hypothetical protein	A0A222ZMV8	Mycobacterium_phage	7.1e-23	53.8

DBSCAN-SWA_3

2540602 : 2568232

Mycobacterium_phage(35.71%)

transposase,integrase

attL 2540532:2540591|attR 2571899:2573165

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2540532:2540591	attL	NA	NA	NA	NA
WP_099156389.1\|2540602_2541764_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.2e-24	28.0
WP_005068389.1\|2542121_2543555_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_024571246.1\|2543551_2546146_-	DEAD/DEAH box helicase	A0A097BY72	Enterococcus_phage	5.0e-09	27.6
WP_050544336.1\|2546308_2546491_-	hypothetical protein	NA	NA	NA	NA
WP_024571247.1\|2547150_2548188_-	AAA family ATPase	NA	NA	NA	NA
WP_005068399.1\|2548190_2550242_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_024571248.1\|2550238_2550994_-\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
WP_005068404.1\|2551587_2552709_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	2.3e-11	21.0
WP_024571249.1\|2552701_2553067_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_062914938.1\|2553044_2554502_+	hypothetical protein	NA	NA	NA	NA
WP_005068421.1\|2554578_2554803_-	hypothetical protein	NA	NA	NA	NA
WP_005068424.1\|2554878_2556141_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_024571251.1\|2556220_2557465_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_005068429.1\|2557464_2558271_+\|transposase	transposase	U5N3V8	Enterobacteria_phage	2.7e-54	44.2
WP_065209293.1\|2558392_2558707_-	WhiB family transcriptional regulator	A0A1B0XUI6	Freshwater_phage	2.4e-14	50.0
WP_062878846.1\|2558706_2558955_-	WhiB family transcriptional regulator	A0A097EWF7	Mycobacterium_phage	2.4e-14	50.0
WP_005067380.1\|2559616_2559946_-	hypothetical protein	NA	NA	NA	NA
WP_032670028.1\|2559942_2560161_-	hypothetical protein	G1JX72	Mycobacterium_phage	2.1e-09	47.4
WP_074359886.1\|2560390_2561173_-	hypothetical protein	A0A2D1GG45	Gordonia_phage	2.2e-16	47.5
WP_062914872.1\|2562607_2562793_-	hypothetical protein	NA	NA	NA	NA
WP_062914871.1\|2562891_2563245_-	hypothetical protein	A0A2L0HJY8	Mycobacterium_phage	1.9e-28	57.1
WP_062914870.1\|2563241_2564015_-	hypothetical protein	A0A222ZKS9	Mycobacterium_phage	2.6e-22	34.3
WP_062914869.1\|2564011_2564800_-	hypothetical protein	A0A142KB23	Gordonia_phage	1.5e-54	48.3
WP_062914868.1\|2565280_2565844_-	hypothetical protein	A0A160DEM6	Gordonia_phage	2.9e-47	44.8
WP_079670803.1\|2565983_2567603_-	site-specific DNA-methyltransferase	A0A2P1JRA9	Mycobacterium_phage	1.6e-194	63.3
WP_079729071.1\|2567599_2568232_-	hypothetical protein	G1D0U2	Mycobacterium_virus	3.4e-20	35.5
2571899:2573165	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2856089 : 2864648

Streptococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005068898.1\|2856089_2856761_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	4.9e-17	31.1
WP_005057567.1\|2856874_2857798_+	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	1.1e-08	31.6
WP_005068900.1\|2857799_2858669_+	class A beta-lactamase	A0A1B0VBP7	Salmonella_phage	1.5e-55	46.0
WP_005068903.1\|2858770_2861137_-	RelA/SpoT family protein	A0A291L9W9	Bordetella_phage	1.8e-13	38.4
WP_005068905.1\|2861167_2861701_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.1e-14	36.4
WP_005137446.1\|2861697_2863374_-	hypothetical protein	NA	NA	NA	NA
WP_016892306.1\|2863373_2864648_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.5e-22	28.6

DBSCAN-SWA_5

4074246 : 4083745

Burkholderia_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005071256.1\|4074246_4075371_-	acyltransferase	A9YX16	Burkholderia_phage	2.7e-20	28.7
WP_005071257.1\|4075367_4076636_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	3.3e-06	40.3
WP_012296730.1\|4076685_4077492_-	macrocin O-methyltransferase	A0A2R8FDY2	Brazilian_cedratvirus	4.9e-56	52.6
WP_005138043.1\|4077702_4078395_-	class I SAM-dependent methyltransferase	Q98VI8	Paramecium_bursaria_Chlorella_virus	3.7e-12	30.2
WP_005138044.1\|4078627_4079761_-	acyltransferase	A9YX16	Burkholderia_phage	7.0e-16	26.2
WP_005062162.1\|4079928_4080990_-	NAD-dependent epimerase/dehydratase family protein	A0A0E3IB24	Synechococcus_phage	1.6e-17	25.8
WP_005138046.1\|4081153_4082413_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	2.1e-05	39.2
WP_079636292.1\|4082555_4082855_-	hypothetical protein	NA	NA	NA	NA
WP_005062166.1\|4082878_4083745_+	glucose-1-phosphate thymidylyltransferase RfbA	H9NC64	Sphingomonas_phage	2.8e-89	57.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016191

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection