CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP016282	Cryobacterium arcticum strain PAMC 27867 chromosome 1, complete sequence	10 crisprs	csa3,DEDDh,WYL,cas3	2	5	4
NZ_CP016283	Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence	0 crisprs	csa3,PD-DExK	0	0	0
NZ_CP016284	Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_2, complete sequence	0 crisprs	NA	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016282_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_1

338287-338386

Orphan

Consensus_repeat	Method
GCCCGACCCGGCCCGCGCCACCGTCTGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016282_1

>merge|NZ_CP016282|1|338287-338386|CRISPRCasFinder
GCCCGACCCGGCCCGCGCCACCGTCTGACCCGGCGCGCGCGACCGCTTCACCCGGCACGCCCTCCCGGCCGCCCGACCTGGCCCGCGCCACCGTCTGACC

>NZ_CP016282|1|1|338287-338386|CRISPRCasFinder
GCCCGACCCGGCCCGCGCCACCGTCTGACC	CGGCGCGCGCGACCGCTTCACCCGGCACGCCCTCCCGGCC
GCCCGACCTGGCCCGCGCCACCGTCTGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_066592264.1\|329137_330082_+\|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP016282.1\|WP_066592273.1\|332340_334023_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223521
NZ_CP016282.1\|WP_084021341.1\|345829_346798_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
NZ_CP016282.1\|WP_066592275.1\|334296_335991_+\|circularly-permuted-type-2-ATP-grasp-protein	unknown	unknown	gnl\|CDD\|225190
NZ_CP016282.1\|WP_066592261.1\|328758_329031_+\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|236066
NZ_CP016282.1\|WP_066592294.1\|344402_345833_-\|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl\|CDD\|223492
NZ_CP016282.1\|WP_157109076.1\|347887_348541_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066592283.1\|336910_337753_+\|transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|224224
NZ_CP016282.1\|WP_066592299.1\|347263_347833_+\|alternate-type-signal-peptide-domain-containing-protein	unknown	unknown	gnl\|CDD\|274972
NZ_CP016282.1\|WP_066598784.1\|343825_344347_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP016282.1\|WP_066592303.1\|348546_349869_+\|RICIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|238092
NZ_CP016282.1\|WP_066598782.1\|340360_341734_+\|isocitrate-lyase	unknown	unknown	gnl\|CDD\|237893
NZ_CP016282.1\|WP_066592291.1\|338641_340156_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP016282.1\|WP_157109077.1\|349870_350506_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|131283
NZ_CP016282.1\|WP_066592278.1\|335984_336914_+\|alpha-E-domain-containing-protein	unknown	unknown	gnl\|CDD\|377234
NZ_CP016282.1\|WP_066592268.1\|330774_331464_+\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_CP016282.1\|WP_066592271.1\|331653_332292_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP016282.1\|WP_066592266.1\|330207_330639_+\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
NZ_CP016282.1\|WP_084020536.1\|327271_328474_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP016282.1\|WP_066598783.1\|342035_343664_+\|malate-synthase-A	unknown	unknown	gnl\|CDD\|236432

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_066592264.1\|329137_330082_+\|transcription-termination/antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	2.08567e-73
NZ_CP016282.1\|WP_066592273.1\|332340_334023_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.66967e-48
NZ_CP016282.1\|WP_084021341.1\|345829_346798_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.68959e-109
NZ_CP016282.1\|WP_066592275.1\|334296_335991_+\|circularly-permuted-type-2-ATP-grasp-protein	gnl\|CDD\|225190	COG2308, COG2308, Uncharacterized conserved protein [Function unknown].	0
NZ_CP016282.1\|WP_066592261.1\|328758_329031_+\|preprotein-translocase-subunit-SecE	gnl\|CDD\|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	2.58946e-15
NZ_CP016282.1\|WP_066592294.1\|344402_345833_-\|deoxyribodipyrimidine-photo-lyase	gnl\|CDD\|223492	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair].	1.05137e-163
NZ_CP016282.1\|WP_066592283.1\|336910_337753_+\|transglutaminase-family-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	1.60627e-37
NZ_CP016282.1\|WP_066592299.1\|347263_347833_+\|alternate-type-signal-peptide-domain-containing-protein	gnl\|CDD\|274972	TIGR04089, conserved_hypothetical_protein, alternate signal-mediated exported protein, RER_14450 family. Members of this Actinobacterial protein family contain the cognate signal peptide domain, modeled by TIGR04088, for the variant SipW form of the signal peptidase I family. The remainder of this protein, however, differs from families such as Peptidase_M73 (pfam12389) and YqxM (TIGR04087) that share the same signal peptide domain. Some additional homologs to this family lack full-length homology and are excluded by the trusted cutoff as set. The two known targets for export by the SipW signal peptidase in Bacillus subtilis act in producing biofilm matrix material.	1.47316e-20
NZ_CP016282.1\|WP_066598784.1\|343825_344347_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.65635e-10
NZ_CP016282.1\|WP_066592303.1\|348546_349869_+\|RICIN-domain-containing-protein	gnl\|CDD\|238092	cd00161, RICIN, Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.	1.87565e-11
NZ_CP016282.1\|WP_066598782.1\|340360_341734_+\|isocitrate-lyase	gnl\|CDD\|237893	PRK15063, PRK15063, isocitrate lyase; Provisional.	0
NZ_CP016282.1\|WP_066592291.1\|338641_340156_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.2431e-13
NZ_CP016282.1\|WP_157109077.1\|349870_350506_+\|signal-peptidase-I	gnl\|CDD\|131283	TIGR02228, Signal_peptidase_I_W, signal peptidase I, archaeal type. This model represents signal peptidase I from most archaea, a subunit of the eukaryotic endoplasmic reticulum signal peptidase I complex, and an apparent signal peptidase I from a small number of bacteria. It is related to but does not overlap in hits with TIGR02227, the bacterial and mitochondrial signal peptidase I.	1.54107e-16
NZ_CP016282.1\|WP_066592278.1\|335984_336914_+\|alpha-E-domain-containing-protein	gnl\|CDD\|377234	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif. An uncharacterized alpha helical domain containing a highly conserved ER motif and typically found as a tandem duplication. Contextual analysis suggests that it functions in a distinct peptide synthesis/modification system comprising of a transglutaminase, a peptidase of the NTN-hydrolase superfamily, an active and inactive circularly permuted ATP-grasp domains and a transglutaminase fused N-terminal to a circularly permuted COOH-NH2 ligase domain.	1.7507e-101
NZ_CP016282.1\|WP_066592268.1\|330774_331464_+\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	7.3093e-134
NZ_CP016282.1\|WP_066592271.1\|331653_332292_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	1.17393e-41
NZ_CP016282.1\|WP_066592266.1\|330207_330639_+\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	1.81792e-94
NZ_CP016282.1\|WP_084020536.1\|327271_328474_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP016282.1\|WP_066598783.1\|342035_343664_+\|malate-synthase-A	gnl\|CDD\|236432	PRK09255, PRK09255, malate synthase; Validated.	0

>NZ_CP016282.1|WP_066592283.1|336910_337753_+|transglutaminase-family-protein
MKRLRIRHTTGYRYNGEVATSYNEARMLPVTSPDQFVLYSNLDISPVSSNHNYLDYWGTRVSSFEVLTPHAELTLTANSLVEVSPREHPAHPVSWDELATAVARSTSSVEHSWQTPLTEPPEDVVASAQEIAGRLDPCDAALAICRFVGENMAYVQGVTGVKTNAREAWADKRGVCQDITHVALGALRAVGIPARYVSGYLHPKPLAEIGETVTGESHAWVEWFCGDWRGYDPTNLIDIGDRHVGVGRGRDYNDIAPLRGVYAGTGGSQLFVKVEITRES
>NZ_CP016282.1|WP_066592278.1|335984_336914_+|alpha-E-domain-containing-protein
MLSRIAESLFWIGRYIERSDGTARILDVHLQLLLEDPWIEENLACRSLLHLMGSPVPPDRDLTRKDVLATLAADRTHPASIAYSLGAARENARRAREIVSTELWECLNTTYTKMPKNIASAKTHDFFGWVRERAALAVGIVESSASRDDAWHFFTLGRSLEQADMTARLLATRSLTENSGPSWTTILRSCGAYESYLRTYRGVPSARNAAEFLLLDRLFPRSIVFSISRAEQCMQELEPRTDRVGVSDSSQRILGQIRSQLEYRPIMEILNDLPKHMDMVLDATSTASESIGQRYFPTSAVPTWTGEAS
>NZ_CP016282.1|WP_066592275.1|334296_335991_+|circularly-permuted-type-2-ATP-grasp-protein
MVDLFSGYGATSAPPRERGQASAWDEMFPDPSSLSPSEARAAYKDVYGALARMTQEELRGRTDALASSYLAQGVTFDFAGEERPFPLDAVPRVIEQPEWVNVEAGIKQRVLALEAFLADIYGPQAAVRDGVIPAGLITSSKHFHRQAAGIVSANNVRIQVSGIDLIRDEVGAWRVLEDNVRVPSGVSYVISNRRVMAQTLPELFVSMRVRPVGDYPNKLLQALRASAPAGVDDPNIVVLTPGVFNSAYFEHTLLARLMGVELVEGRDLFCSGGRVWMRTTAGPTRVDVIYRRVDDEFLDPLQFRADSQLGSPGILMAARLGNVTIANAVGNGVADDKLVYTYLPDLIKYYLGEEAIIPNVDTWRLEDPLALEEVLDRLDQLVVKPVDGSGGKGLVVGPAASKAELETLRQQLLKDPRGWIAQPVVQLSTIPTLVEDGMRPRHADLRPFAVNDGTDVWVLPGGLTRVALPEGELVVNSSQGGGSKDTWVIGLEPDFHTRTSAHDIQGLVADQAANTQSISIIPTRSVDHNPQDTPPGGDQDQEQQQQQQRTTPTASTTVEGTLEC
>NZ_CP016282.1|WP_066592273.1|332340_334023_-|ABC-transporter-permease-subunit
MRAVAGPRWLGFLIPASLLISAVLLVARLAGPADALLSILSARLPLTTAAAAATPVLSAILGVGLGLLAAQRSPWAGRSLRTLAFVGSALCAVWVAMACAFWFAVQTEVMPVLTDGPLARAGLGVLSTLVLPGTAVVFGAAVAVAVHVREAARRVALEPFVQTARSHGLPISRLVVRTALRRTLAAVLSVLVAEVVLIYGCALLLQAVLTRPALSAQLPTLLPPESLPVVLGAALFVTVAIVIGGVMIATAAPGDPTLEPRPPAPRRRSGAIGSLAVILSDTSSPSPGPTRASTTFRASDILDIRDLQIRPHGAGSELAAGTGISLTVSRAQALAVIGDEGSGAIPLCLAIAGLLPPTTVITSGSVLFEGTELVGLPEHHFRKLRGRKIGFLDRPAPDRFGRDWRIARHLSTVLPPADTRNTRRNALDLLQRVGVETPEAILDARPRDLSAVTLQRVLLASALARNPQLLIALDPAAGFDPHEEADLLDLLHDLHRERELTLIVASARPVIVARCDRVAVLQAGTVIEHASAGEILTAPQHPHTRRLFNGTASGPAPIGR
>NZ_CP016282.1|WP_066592271.1|331653_332292_+|GntR-family-transcriptional-regulator
MVSTGGEKVYLALRARILSGELGPHSTLREQALAEELGVSRTPVREALRRLDEAGLVTFVPNRGATVVAWTIEQVRETYFVRASLESRAAALAATRISVAELDLLAELIDAMEPVLTSVDDAGLAELSRLNAEFHRIVVAASRSPQLVALTSSISRVPLMAAAFRRGGGDFRARSNHQHRDILTALRTGDTLWAEVAMRSHVLGARNAVTED
>NZ_CP016282.1|WP_066592268.1|330774_331464_+|50S-ribosomal-protein-L1
MAPKSKAYRAAVEKIEADKFYTPTEAVTLARETGSVKFNSTVEVALKLGVDPRKADQMVRGTVILPHGTGKTARVIVFATGPAAEAAIAAGADEVGGDELIEKVAAGYTSFDSAVSTPELMGKVGRLGKVLGPRGLMPNPKTGTVTPDVAKAVSDIKGGKIEFRVDKHSNVHFVVGKASFSADQLNENIGAALEEIVRLKPSSSKGRYITKGAVSTTFGPGIPLDVNSI
>NZ_CP016282.1|WP_066592266.1|330207_330639_+|50S-ribosomal-protein-L11
MAPKKKVTGLIKLQIKAGAANPAPPIGPALGQHGVNIMEFCKAYNAQTESQRGNVIPVEITVYDDRSFTFILKTPPAAELIKKAAGVAKGSGTPHTVKVAKLTKAQVREIAEAKMVDLNANDLDAASKIIAGTARSMGITVEG
>NZ_CP016282.1|WP_066592264.1|329137_330082_+|transcription-termination/antitermination-protein-NusG
MTETNRDDVDWATAAEQSSNDDEAQEGNTLAADETSVEAAEQVALHVEDENADIEDDLDAALDALAESTDPEADAIVEDALDIDSADEAEAAAEAVEDEEEVDAEAEAEDEDPYEAFRKELRFQPGKWFVIHSYAGFERRVKSNIENRKQSMAMEDFIYQVEVPMEDVVEIKNGQRKMVTRVRIPGYVLVRMDLNEDSWSVVRHTPGVTGFVGNAHNPTPLRFEEAFGMLKGLVEIKDVPVTKSGAPGKAAQRVLPAEIDYEIGETITIKEGSFAGLPGSISEIKPESGKLIVLVSLFERETPVELSFDQVTKL
>NZ_CP016282.1|WP_066592261.1|328758_329031_+|preprotein-translocase-subunit-SecE
MARKVIDEPSEEIVANARVARETKRGPFARVSLFIKQVLAELRKVVTPTRKELLSYTGVVLIFVVIMMALVSALDWVFALVVTYVFGTPS
>NZ_CP016282.1|WP_084020536.1|327271_328474_-|pyridoxal-phosphate-dependent-aminotransferase
MAHDIKRISTRIGSIAESATLKVDGKAKALQAAGRPVISFAAGEPDFPTPAHIVEAALAAVKDPRNHRYTPAAGLPDLREAIAAKTLRDSGLEVGPSRVLVTNGGKQAVYQAFATLLDPGDEVLLPTPYWTTYPEAIRLAGGVPVDVFAGSDQGYLVTVEQLEAARTEKTKVLLFVSPSNPTGAVYSEEQTRAIGEWAEEHGLWVISDEIYQNLTYDGVRAVSIVEAVPALADRTILVNGVAKTYAMTGWRLGWMVGPQDAITAAANLQSHLTSNVSNISQRAGIAALNGPQDDAEAMRVAFDRRRKLIVAELNKIPGILTPTPQGAFYVYPDVTGLLGRTWGGVTPTTSLELADLILDQAEVAAVPGEAFGPSGFLRLSYALGDDALLEGIRRLQTLFA
>NZ_CP016282.1|WP_066592291.1|338641_340156_-|helix-turn-helix-transcriptional-regulator
MVTVDRPARPTTPSADLPAGPAGTADAEAGIDALTLGRRVRDRRHRLGLTLDTLAAAVDRAPSQISMIENGKREPRLSMLRLIAAALDTTVDELLRADAPSPRAALEIAVERAQRGPVFTALGLPRFRVGPGQPDDTLQTILTLHNEIERLHRERAATPEEARRANAQLRAEMRARDNYFPELEAQALELLTAVGHSGGPVSHQVVADMAAHLGFSLHYVGDLPHSTRSVTDKRNGRIYLPTEQAASRDSRSPILQAFASHLCGHSEPGNYADFLRQRVETNYLTAAILLPETDTLRMLSDAKAARRISLEDLRDAFSVSYETAAHRFTNLATARLGIPVHFMKVHESGTIIKAYENDDVQFPSDALGAVEGSTVCRSWTARTVFDVPDRFSPWYQYTDTPAGTFWCTSRIEKAKEGDYSVSVGVPFTHVNWFRGRETANRAVSRCPDESCCRRAPDELSGRWEGQSWPVARTPTSLLAALPTGTFPGVDPTEVYQFLEAHAPD
>NZ_CP016282.1|WP_066598782.1|340360_341734_+|isocitrate-lyase
MTNPTATGPASGRPASRPGDQTQTAAELALEWAADPRWEGVRRDYTAEDVIALRGAVREERTLARRGAEKLWDLIHENGTPENPEWVAALGALTGNQAVQQVRAGLKAIYLSGWQVAADANLSGQTYPDQSLYPANSVPAVVRRINNALLRAGQIEGAEAVASGADATNNGTGIDWMAPIVADAEAGFGGPLNAYELMASMIEAGAAGVHWEDQLASEKKCGHMGGKVLVPTGQHIRTLNAARLAADVAGVPTIIIARTDSLAATLITSDIDERDQAFLTGSRTAEGFYDTANGADVVIMRGLAYAPYADLLWVESSEPDLELAQRFAREIHAQFPGKKLAYNCSPSFNWKSHLDDDQIAAFQRELAACGYAFQFITLAGFHALNHSMFTLAKDYSERQMSAYVDLQEAEFASEADGYTATRHQREVGTGYFDRIATALNPTSATLALAGSTEAEQF
>NZ_CP016282.1|WP_066598783.1|342035_343664_+|malate-synthase-A
MRPHLEITGELGDRYDEILTPAALEFLAELHDRFAGTRHDLLAARLQTRVDAANGRDPRFLPETAHIRNDPTWRVAGPGPGLANRRVEITGPTDRKMAINALNSGANVWLADQEDATSPTWANVIEGQLTLVDAIRGTLTYDGPDGKAYRVTGAPSDRVDGARPGTTPTIVMRPRGWHLVEKNLTFVDRANRRMPASGSLVDFGLYAFHNAHRLIEQGSGPYFYLPKLESHLEARLWNDIFSHTEDHLDLGHGSIRATVLIETIQAAFEMEEILYELRDHCAGLNAGRWDYIFSIIKTFRARGRRFVLPDRREITMTVPFMRSYTELLVATCHRRGAYAIGGMSAFIPNRRDPAVTQLALEQVAADKRREARDGFDGTWVAHPDLIPTARAEFDAVLGDRSHQLERTREDVHVTAVDLLDVASAGGQITEAGVRDNVSIALRYIESWLRGVGAAAIDNLMEDAATAEISRSQVWQWIHENSALADGRRIDAEWVAGLVTEELAALPRTPGDRFDDALEVFRASALEPEFPTFLTVAAYARYL
>NZ_CP016282.1|WP_066598784.1|343825_344347_+|GNAT-family-N-acetyltransferase
MRPARSDEAAALAELAAATFALACPPHTSADAIAAFLRDVLAPANFEAFLADPDRLLLVAETGASTLVGYTMLVFGEPHDADAAGAIRIRPTAELSKCYVRAEAHGSGTAAALMAATLDAARQGGAAGSWLGVNQENVRALRFYGKHGFEQVGIKRFLVGERYEDDYVLERSL
>NZ_CP016282.1|WP_066592294.1|344402_345833_-|deoxyribodipyrimidine-photo-lyase
MSGTEAAAEPGPARPDGPSLVWLRDDLRLGDNPALTAAVERGRPITLLYLLDEVSPGIRPLGGASRWWLHQSLVSLAADAAALGGRLVLRRGAAEAMIGELVEELGAGAVFWNRRYGAAERELDTRIKTSLTDAGVVAHSFAGSLLFEPWTIRTGGGTPYTVFTPFWRACTSGPPPRAPYPAPAELSDADPDLDSDDLPSWELEPSRPDWAGGLREAWTPGESAAQELLADFLDESLPTYGTERDLPAQQVTSRLSPYLRWGQISPHQIWHTTDVARRGLTGAAATSATRFLTEVGWREFAHHVLFHAPDLATVNLRPGFDAFPWPPLDVRALAAWQQGRTGIRLVDAGMRELWRTGTMHNRVRMVTASFLIKNLLIDWRLGEQWFWDTLVDADQASNPFNWQWVAGSGADAAPYFRVFNPELQATKFDPHNEYVRQYVPEWGTDAYPAPIVDLGETRRAALAAYEQVKSARPTPD
>NZ_CP016282.1|WP_084021341.1|345829_346798_-|NADP-dependent-oxidoreductase
MRALVIDRTGGAEELHLTELPVPVPVSDELLIRVLAAGINPIDAKTRAGSGAAAAIPGFPVVLGNDFSGIVVRSPYDTFPLQPGDAVYGMARPPRIAGTYAEYVVVSSMSVARKPAAVSHVEAAGIPLAALTAWGMVTLAGAAPGQRMLVHAGSGGVGHFAVQFARHLGAHVTATGSTASVEFLQRLGAHAVIDYSTTRFDDELRDIDSVIDLIGNVHDQTGTRSLTVLRPDGLLVNAPTGSWPTMQAEAAAAGVRVTGYKVAADARVLEKITTLIDNGTVRVNIDQVFDLADGAAAHRALEGGHTRGKIVLRVSDADESAA
>NZ_CP016282.1|WP_066592299.1|347263_347833_+|alternate-type-signal-peptide-domain-containing-protein
MNKLLKGTIAGVAGVVLLLGGAGSFALWNSAGTIGGGTIVAGTLELASSTTAGSWTVNGGAPRASMTGFKIVPGDVLVYTKGLSITATGDNLVATLAVDPASITATSTAPADVALAAYLGKTAVLTATGTGISTGAAPFTVTAGTAGVAQDVTVSITITYPKSATAGLENSSKLGSVNLAALAVTLTQK
>NZ_CP016282.1|WP_157109076.1|347887_348541_+|hypothetical-protein
MPPTADQSEPRVRMRRPHPGHRMARPGRPRRSPRAHRAPVLALTVGALAAALLGASAAGGTGAFLTARASTPAAPTVITSGTAALTLTALTLPGTALYPGLTLYGAVTATNTGDVPLLLGVAGLTPPSVATASNALSQALSVGLGAADSSAACTAGTATPTWRGSFAQAPAGLLGVTLAVGASRTLCVSVSLPASAPASSQGQSATGFALRVTGTQA
>NZ_CP016282.1|WP_066592303.1|348546_349869_+|RICIN-domain-containing-protein
MTSRAASTAEHRTVRPGGRAVLSLSMVLAFLGAGLGAGAGEAQAGWTTPESPATASVTAGTLGVTLTGFPALQAVYSSAALAVTAPVSVTNTGTVPAPYTLTLAAQTATALASAVEVRAWSVASATNCTATTTTAGTPGRTWVTVGPLTGTLAPGASAVYCVRSSVTQAQRFALVAGSVTATATLTAAQGNWTGTATASAPQSMADTLTPGAPTAAAATDSSITLAWTAPADTAAVTGYRILRDSVVIATVPAANRTFTDLALTVATRHSYTVQAVDSASPVDVSPASPAGILSTTGRTATGWYSIRNTTSQLCVDGEAAATAEGTALISFPCKTAGAGNQNWQFVATGAYVRVAARYAPTLFWDSANTTASILRGTARTNSQQWTVVEIAPGSGTFLFRNRNNMCLDVAGGTTATGNPQLRVAACDGSALQAFTLTNGG
>NZ_CP016282.1|WP_157109077.1|349870_350506_+|signal-peptidase-I
MTVHSAQRPARVHARVRRSAEPAELSAWHYLGRGLSAGLLLLVIALAALVIVVPQLTGAIPLTVLTSSMEPGLPPGTLIVVRPVPSDSLAIGDVVTYQIRSGEPAVVTHRIVGISVAADGVRTFTLRGDNNSVPDVDPVVAAQVRGRLWYSVPLIGLVNTVLTGPVKAWVVPLAALGLFGYAGVMVVGGLIEARARRPARTAGSDRDAQRP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_2

545098-545171

Orphan

Consensus_repeat	Method
CGGTGGTCGAGCCTGTCGAGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016282_2

>merge|NZ_CP016282|2|545098-545171|CRISPRCasFinder
CGGTGGTCGAGCCTGTCGAGACCCGCGACCCAACCCGCCCACCGCGCACCCCGGTGGTCGAGCCCACCCCCACG

>NZ_CP016282|2|2|545098-545171|CRISPRCasFinder
CGGTGGTCGAGCCTGTCGAGACC	CGCGACCCAACCCGCCCACCGCGCACCC
CGGTGGTCGAGCCCACCCCCACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_066592721.1\|546269_546956_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|200413
NZ_CP016282.1\|WP_084020574.1\|548571_549195_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319972
NZ_CP016282.1\|WP_157109088.1\|555727_556228_-\|serine-acetyltransferase	unknown	unknown	gnl\|CDD\|223975
NZ_CP016282.1\|WP_167550814.1\|551018_553118_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224748
NZ_CP016282.1\|WP_066592696.1\|535199_535850_+\|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224046
NZ_CP016282.1\|WP_066592698.1\|536276_537725_+\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238141
NZ_CP016282.1\|WP_084020572.1\|542276_543026_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_CP016282.1\|WP_066592706.1\|539682_540927_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP016282.1\|WP_066592723.1\|547129_548569_+\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP016282.1\|WP_084020576.1\|554339_554918_-\|serine-acetyltransferase	unknown	unknown	gnl\|CDD\|223975
NZ_CP016282.1\|WP_084020577.1\|554963_555731_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_CP016282.1\|WP_066592710.1\|540923_542207_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_157109087.1\|553279_554077_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP016282.1\|WP_157109089.1\|556278_557640_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240527
NZ_CP016282.1\|WP_066592713.1\|543096_543747_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP016282.1\|WP_084021349.1\|549522_551007_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|274398
NZ_CP016282.1\|WP_084020570.1\|532947_534174_-\|ABC-transporter	unknown	unknown	unknown
NZ_CP016282.1\|WP_157109086.1\|539070_539340_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066592692.1\|534254_535145_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_CP016282.1\|WP_066592700.1\|537721_539071_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_066592721.1\|546269_546956_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|200413	TIGR04162, CAAX_amino_terminal_protease_family_protein, exosortase E/protease, VPEID-CTERM system. Members of this protein family are fusion proteins of exosortase (N-terminal) and a CAAX prenyl protease domain (C-terminal). Members are restricted to the alpha Proteobacteria. The variant C-terminal protein sequence VPEID-CTERM occurs only in these species, often adjacent.	3.12409e-06
NZ_CP016282.1\|WP_157109088.1\|555727_556228_-\|serine-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	2.71077e-39
NZ_CP016282.1\|WP_167550814.1\|551018_553118_+\|acyltransferase-family-protein	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	6.7197e-57
NZ_CP016282.1\|WP_066592696.1\|535199_535850_+\|metal-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	9.59874e-67
NZ_CP016282.1\|WP_084020572.1\|542276_543026_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	3.57682e-82
NZ_CP016282.1\|WP_066592706.1\|539682_540927_+\|ATP-binding-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.03722e-12
NZ_CP016282.1\|WP_066592723.1\|547129_548569_+\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	6.98768e-74
NZ_CP016282.1\|WP_084020577.1\|554963_555731_-\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	4.2135e-55
NZ_CP016282.1\|WP_157109089.1\|556278_557640_-\|hypothetical-protein	gnl\|CDD\|240527	cd12082, MATE_like, Multidrug and toxic compound extrusion family and similar proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. MATE has also been identified as a large multigene family in plants, where the proteins are linked to disease resistance. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	0.000513787
NZ_CP016282.1\|WP_066592698.1\|536276_537725_+\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	1.53749e-05
NZ_CP016282.1\|WP_157109087.1\|553279_554077_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.06575e-44
NZ_CP016282.1\|WP_066592692.1\|534254_535145_-\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	6.8336e-50
NZ_CP016282.1\|WP_066592713.1\|543096_543747_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.11349e-28
NZ_CP016282.1\|WP_084021349.1\|549522_551007_+\|sugar-transferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	5.0295e-143
NZ_CP016282.1\|WP_084020576.1\|554339_554918_-\|serine-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	7.99867e-38
NZ_CP016282.1\|WP_084020574.1\|548571_549195_+\|hypothetical-protein	gnl\|CDD\|319972	cd16344, LMWPAP, low molecular weight protein arginine phosphatase. Low molecular weight protein arginine phosphatases are part of the low molecular weight phosphatase (LMWP) family. They share a highly conserved active site motif (V/I)CXGNTCRS. It has been shown that the conserved threonine, which in many LMWPTPs is an isoleucine, confers specificity to phosphoarginine over phosphotyrosine.	1.15568e-29

>NZ_CP016282.1|WP_066592713.1|543096_543747_+|response-regulator-transcription-factor
MHRYRVAMIDDHEIVARGFAGLFDTIPEIHVVATVATVAELLDQVGETHIDLVILDLRLSDGSTVTGNVDRLRATGAAVLAFTGGDDAQLMRAAARSGVLGVVRKSEPANVLLDAVTRAAAGDTIASTEWAAALDGDPDLSDAGLSPREREVLSLYAAGAKAPLVASHTGLSELTVVDYIRRVRSKYERVGRPASTKIDLYKRALEDGILPVPGRS
>NZ_CP016282.1|WP_084020572.1|542276_543026_+|thymidine-kinase
MAKLYFRYGAMNSGKSTSMLQAAYNYEERGHRVLLTKPSIDTKGDRGILSRLGVTRGVDFLLTPDTDAYTAFQEHRAAVLAGTGLDVSALLVDEAQFLTEPQVDDLLRIAIIENVPVLAYGIRTDFQTVAFPGSRRLLEVAHSLEELKTICRCGRKAVFNGRKVDGAFVFDGDQVAIDGVEVTYESLCGSCYLEESHGVLNNRRREALRHEAGHGGQERGRSTDGSLQNADSFVESAPASPPARSPSPQ
>NZ_CP016282.1|WP_066592710.1|540923_542207_+|hypothetical-protein
MTPRRATQQRLDPLGTLAAWPLAPLIAAIVLCYSVIATVLQQSQIQNPLLATLAVLAMAAAAGILVLATQPANAPFDGRLHLAMLGFALLGYLLEQFSRWGGNLLVQDDFGPVCIGFLLLALAPYRPWREIALSGAAASVVAIVITVPQQPYYEITVPIAVYAIVSATQILAPAAAGAAYSRRIVRSILAWQEDARRAIVARTEEARGQMARAVVEQQIAALRSGVIPFLTELLERRSVSAVDIAHAGQLAADVRRTLVAEFDRTWLDSVATRERAALTERGTPGLLVVADPDHRANAFRAEQRAATAALIGALCAAPGFDPHSLVVQIAGAAKPGAANALQPLVDTMTIQAALDLPPRRVRAVLRPYLGVIRVVFDNVRVTVRRPSLTIEFDSVRASHAADQADEAPATPATPAGVRARHTPRQVR
>NZ_CP016282.1|WP_066592706.1|539682_540927_+|ATP-binding-protein
MSLGLPGHLVQATLSRALARASHWFGLICLGGALLSVIALSVFPPTDRLLVTVAAILGMGGLLALLAKWRTVPLTIAYLVIGAVCTYLFTGAVLGMPGVFPASDMFLISLPKMALIMVGGAGSGALVGVLWSTVGFLMAEVSATLAVSQTPVPDRPDIFTIVTYLFLVGVMLLDGLARRTGRTAQPAIHRAVQDDESRSLRHDFDLRAVALMHDTTLNQLVSVARAKPGPMTPALEAAVRETLQTLEQRDWLTHVDERTATSPGSDGWLSSSVFATIDRMRDRGLVVDITGDKEALARLDAQSDRELGLAVQQCLVNVLLHAGIVTAEVVIDADEQNVSVMVLDAGRGFMEAETGSDRLGLRQSVRKRIERLGGSVQVWSRPGAGTSVLLTLPAPPASPEAPTSPAVPAIEPTP
>NZ_CP016282.1|WP_157109086.1|539070_539340_-|hypothetical-protein
MGAGKSVFEWTRGGGIGRLFGTEPPAEGSTLPRMLDVEPAWAIIGPAIVVIAAGIELVAQSGWLWLVVAVGVVYSVQGIVSARQYWGKR
>NZ_CP016282.1|WP_066592700.1|537721_539071_-|hypothetical-protein
MQGIINRLGNDFPTLALLLLLAIVAAWLAWRHPKVLPSVLVIVAGLLSEPNAWGADYSSFAAPIMVAAAVLAVIADSKVTVLKRQFASYRSTIVWVSLALLWLVVGDLAFNLGVDAQGYLNLTIRTVIFLFALAVVLTDQERRIMVARLFALVILLVAGSYAVTLGIWLVAGFGTSQVGEIVVGSWTLPQPVYFPFTITGTSSLQVFGFSVPRLSGIGREPGWMAMYAAFVFFLLPKIGWKNWSLRALVALCLLGTVSTAGFGVFAGVLALYLYGLSKPATPAGKMLRVVSFLFFGSVALWAAAFTPVLGFAVKGDLNAVSLNERTAATTAGLQALLLDPFTGGQGAEAVGSVNLIASIATLGLPFALFTLFALLMPLRTHPRKLDLLILASIPMLTLLTSQPALYSTWVYAMVMIASAATMPASEWEPGGPKLATRPIQQRAQIPALD
>NZ_CP016282.1|WP_066592698.1|536276_537725_+|SGNH/GDSL-hydrolase-family-protein
MDILAIDEAAADAAAKYRPILDQGQNLIAKLDMNAADCSVFVLGDSTGNGIPTTNPEGSEWVTLWAIQLGQRYPSLKILSRSFSDGLTAWSGTVTTLQSGVAPSGLVNAFHDTFSYGARTTLVGALPEVGNAWTAAGTIASGVITTDGATAGYVTGTPAPLLAGTSSQQGGQTVTATGTLDMSRVVGEYTRIYAKCLDTSNYVYVQFVPNANGGGTGVAQVYKRIAGVNTSLALFDVPYPITGTGVQTVVASLSVQGTVVTAVINGTTLVTAITSADATALAASVNAGWLSVSPGFRLTDFNVDVNVAVEGFVQRTLTIWNGSIPGSTFEYLDGRIAALWSPVPAGLDLLVFNSGHNYLARTPADYLAVYEAFVTKNRAQFPAAGVVVTSRNPRFSPATNGADHLSRLAALRKLAAVLGWGYIAALEAFVPRSDGGKAMVRDNGSTDRGIHPTTAYDNAGVTGSSVWADAATRFFNKFSLLP
>NZ_CP016282.1|WP_066592696.1|535199_535850_+|metal-ABC-transporter-ATP-binding-protein
MSQPRDPHAAPVASLRGLGVDFAGQAALRGIDLDVLPGELTVLAGPNGAGKTTLLEVLAGTRPPTAGTRAVTGTVALVPQRTTETDRLPVTARDVVTVGAWGRLGRWRRLDARARMAIDDALERLQIQDLANLPFATLSGGQRQRTLLAQGLASGADLLLLDEPTTGLDSDSADRIREIMRAESERGVAVVCVSHDPLVLSSADRTVRLADGVVAS
>NZ_CP016282.1|WP_066592692.1|534254_535145_-|metal-ABC-transporter-permease
MPSPTAALLEPFTLDFFQRALVGGSLVAILCGVVGTWVVIRGMAFLGEALAHGMLPGVALSTLLGVPVLVGGALSAVAMSLGIGVLQRRGKLSYDTSIGMLFVAMLALGVVIISHSGSFATDATSILFGDILAIASTDLVFLAIAAGVGLFVAAAAHRPLVALALDARVAATLGLGPRSAQAALVGLVSLAVVASYQAVGSLLVVGLLLAPAVAAGHWTTRIPTRMALAAVLGVAAVLVGLLVSWFAATAAGASVAATAIGFACLSWMVHSTVTGLRSATARPAGPRSRTRLTAAR
>NZ_CP016282.1|WP_084020570.1|532947_534174_-|ABC-transporter
MRSRITPLALAGILTLILAACSGTPATAPGTDTATAPTGAGHGAVTGAVELAEPRLGLTTIDQTGAVSHLDLLDESVSDLGTVGEPTAMTTDGRYLFAQTASGVEIIDSGVWTWDHVDHFHYYRADPRLLGTVTGAGAATIATTNLSTTGSTGLFFAESGEAVLLNTEALSKGEITERFRLTLAPGAGLVVPVGSFALVADGAAASVAGYTADGTPTGLDEPCVAPAGTITTRVRAVIGCADGALLASVKDDELTVERIPYPADVSVPAATAFHNREGRPTVAALAGTEGIWLLDTRARSWTLLPAPAPLVQVTAVDDADQHLLALTADGRLLVLNGADGSTIAETAPLVADSLAAGDTPVLLADQQRAYLSAPTERRLYEIDFADGARLARSFDTTTEPAFVAETGR
>NZ_CP016282.1|WP_066592721.1|546269_546956_-|CPBP-family-intramembrane-metalloprotease
MVDAAWGVLASLILVVLLGAAALRGWPRDPVLGELFSYLVVWVPLLAAVLIASMVRGRRSLARDFGFTFRPLDLLWGLTLGVLARLITGFIEIAGYGRLGSAGATFGEPVRDLWWVFAALLAPVLISPVIEELFFRGLLARSVLAAGEASGGSRRAALITAILVSGAVFALVHVVSAGTPTAVMVIGLSTFIFGAGAAALALITGRLGGAIVGHVTFNALVVVPALLG
>NZ_CP016282.1|WP_066592723.1|547129_548569_+|polysaccharide-biosynthesis-tyrosine-autokinase
MELRDYIRILRKSWVLIVLFTLVGAGLAAAYSLTLTPKYSATAKVFVSTQGTGTTSELQQGSTFTIQRVKTYSSLVATPIVLLPVIAKLELGITSDQLASRITASAPLDTSIIDITVTDEDPVRAAKTANSISQSLTAVVEEIEAPAAVDAISPVKLTRAQEATVPSKPVSPNVPLNIVLGTLVGLALGVGLAVLRETLETRVRNEHDVEGVTQVPILGGIVFDPRARDRPLIVHVDPRSPRAESFRTLRTNLQFLDVGRTDRSFVVTSSIESEGKSTTGANLAIALADAGSRVLLIDADLRRPKVAEYMGVEGAVGLTDLLIGRAELDDLIQPWGKAQLFVLPAGQIPPNPSELLGSARMSHFIGEFNRMFDVVIYDTPPLLPVTDAAILAKNVGGAIIVVAAGRTHKNQLKGAISALDNVGAPISGLVLTMLPTKGPDAYGYGRYGYGYGYGDDVVAISSTESAPRRVRAKKAKVRR
>NZ_CP016282.1|WP_084020574.1|548571_549195_+|hypothetical-protein
MNLPLGERPFNVLTVCTGNICRSPIAEDLLRSRLHALGMPCNVHSAGSGALVGRGMTPEAMKVAHRYGGAGENHEARQLTQELAASADLILTATREHRGAVVGFHPRAARYCFTLNQFARLVDPVLESGFLQSAALENSEGESGRLRSFVAEVAATRGYFPPPENLMDDDIEDPYRQPWEVYERVGARVDAGVGTVVRAFAIVSGRK
>NZ_CP016282.1|WP_084021349.1|549522_551007_+|sugar-transferase
MSKTGLSAGRPDIARPILHRDWRDTYAARLIVTDVLVLIWVVFGVQIAWFGLAASDIQFRGRLNEVAVSYTIFSVTLIAAWTLMLGIYGSRGYRVLGTGPQEYKQVADGTVRLFGLVAIVAFLFHVDIARGYILIAFPLGLGVLILSRWMWRQWLSVQRLDGRFSSRVLLVGSEASATHLARELARQPSAGYLVVGACIPSGLVADYLPGTEIPVFSNVEKLQAAMAAVQADTVVVTSSDELAPHRMRELSWSLEPGRQHLVVAPSLTDIGGPRIHTRPVAGLPLIHVETPRYEGMKLYTKRGFDLLGSAALILCLSPFLGIIAIAIRLSTPGTVLFRQDRIGINGRHFNMLKFRSMVTDAEARLPGLQALSEGNAVMFKMKDDPRITPIGRFLRRFSLDELPQLFNVFGGTMSLVGPRPPLEREVSEYENHVHRRFLVKPGITGLWQVSGRSNLSWEDTVRLDLYYVENWSMTGDITILWRTAKAVVARDGAY
>NZ_CP016282.1|WP_167550814.1|551018_553118_+|acyltransferase-family-protein
MSIQSIQGASAPLRPRRFAPKTGGDSKFRPEIQALRALAVTAVLLYHLWPKTFSGGYIGVDVFLVISGYLISAHIQREIQSTGTFRFRRFYMRRVRRLLPAALLVLAVVAVVTILLIPMTYWKDWLGQVVSSLFYVENWYLALSSTDYLAASANASPVQHFWSLSLEEQFYLLWPIWLVFGLWALSKTGLSRRNQPIWTIGIALIASLGYSIWFTNVSAAEAYFVTPTRIWEFAAGGIAAAIGLRIRNRFVAGLASWCGLAVIAACVITLSGATPFPGWIALIPVASTLLVIAAGVPAQWWSTQWLIRFRITQWLGAISYSLYLWHWPLIVIIPVIAGSPLTGPQRLGLIALSAAAGWASKRYVEDRFRQTPNFAAGAKPVRRALVGLRVALIGSIAVAAVALPGLAATTQRSSEAEIALADAQASDFLCLGWNAAQPGCAPAANTSSVIPDPIIAQRDVATVDCAQRGARTKLLTCEFGSKGDNAVSVVLAGDSHAGQWLPALENIALARNWKITTLLKTGCRLTQAPAGTLAVDANCALWNQSAQDWIMSHTPDLVFVSGRSSSADGIPTAEVDLRAQANGIANAWRSVTANGSSLIALAETPQPVVGGLTDPGACVLAHDQSQCTFREGLETSDPQPLAAEMVPGVSLIDLSDEFCIDGYCPAVVGSILVYADNNHTTASFMQTLTVPLGRALTDF
>NZ_CP016282.1|WP_157109087.1|553279_554077_+|IS3-family-transposase
MVAWAASSRAPLMRHRAAHHGRSRMARFLEVFRSGRCARAGRAPSLPSLRRVHVEQKVAFFHGDSDEVYGAPRILADLRADGEIVSRKTVATTMRRLELARICPKKSKTTTIIDHADAYPVDAVKREWDTGALDQVWVGDVTYLRAWEGGGGYLATVIDAHSRRVIGGAIADNMRTDLIEDALRMALVLRGDRPATVIFHSHRGTQYASEQITLFAAQNGITWSMGYIGICWDNAMAESFFATLKTEFYYRRVWPARRPRDPRRR
>NZ_CP016282.1|WP_084020576.1|554339_554918_-|serine-acetyltransferase
MIKTKQDYLEFLAADARSLGRRPTLRTRLRDDVFRFQRSLRLVEYLTNTGAPKPQLMLARWIFRRQSIRLGFSIPVNVFGPGLAIAHYGTIVINSHTRIGANCRIHVGVNIGTSAGFADACPVIGDNCYIGPGVKIFGPIEIGPETAIGANAVVTKSFPEGHGTLAGVPARQISAKTTETLLTKGWSNTAAG
>NZ_CP016282.1|WP_084020577.1|554963_555731_-|glycosyltransferase
MTITAVSVVTIAWNNLDGLKLTVSSVLEQDYANIELIVVDGGSTDGTAEYLKTLPRSVHWVSEPDKGRYDAMNKGAQLSTGQLLWFMHSGDCFGSKSSVSTVVDSWLPTTRWGFGLSRVMSGQRVVGIFGSVRFSLRRFALGGRPISHQAAVISRSLHDTIGGYDIKFGLAADQYYLLKAAILSPPQIWCEFLCNFDNSGAGSVRPAVEHYRDMTKGRRLAGFVSTRSAYLDTLIASAFAVRASIQRRVTQRLAQ
>NZ_CP016282.1|WP_157109088.1|555727_556228_-|serine-acetyltransferase
MKPTVLRFLNAASRNPGLLAVILFRVQTDALERGKRGRAERLRGMNHFLTGVDFVVGAKAGPGLLIHHPNGIVVGRGAKIGANCTLLQQVTLGERYLDQRGPSAYPTLEDGVTVGAGARLLGGIVIGQGSNIGANSVVLIDVPPGHSAVGSPARVLKNRAIEEREE
>NZ_CP016282.1|WP_157109089.1|556278_557640_-|hypothetical-protein
MAKAVVTKRSTIRDMGSTSGYRLLQLALAFVVNSFTIRILTDEHGLNGYALYALIGSFLSLLPFADLGLGVGLVNATSDLRSGRIVKDEYDRIVRRTRDTLLIVSVVLLSVDVVMLLTGTWGVILGNASDDFGAQVASSLTLAALALTLPFGIGARILQGLHLMRVVTMLGVMQPFIQAAGILVCWAADLPAFMFAVVPAITYFSSGVIVFCVSHRKAKLRLGMPLAHLFRPLGLVYRISASAVPFLIISMSMAVAFQTARLLLAQIGSVAQLAEYSFIAQYFAPMLALVTVSAQNLWPRYRDSLNAGSLRVPHLLRHVALFLGLGLGGAGGLAIVVLGISRFVLKTDLLDVNVLFAACIFLVVMAVHQPSAMLLSSPTGLAQQAGALVLMAAVNVWLTIMLIPVLGSAAPYWSSTASVLIIAALPTFLLAVRRIRASSLNGSSRRDKAKEDL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_3

694599-694694

Orphan

Consensus_repeat	Method
GCTGAGGGGGCACTTTGCCGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016282_3

>merge|NZ_CP016282|3|694599-694694|CRISPRCasFinder
GCTGAGGGGGCACTTTGCCGCAAGTGAGCGCGGGCATCTTCGGCGACGTGCCGCGAAGTGCCCTTTCCGCGCCGTTGAGGGGGCACTTTGCCGCAA

>NZ_CP016282|3|3|694599-694694|CRISPRCasFinder
GCTGAGGGGGCACTTTGCCGCAA	GTGAGCGCGGGCATCTTCGGCGACGTGCCGCGAAGTGCCCTTTCCGCGCC
GTTGAGGGGGCACTTTGCCGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_084020612.1\|684292_684709_-\|succinate-dehydrogenase,-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|239581
NZ_CP016282.1\|WP_066592997.1\|687457_688558_+\|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380577
NZ_CP016282.1\|WP_066593004.1\|695944_697039_+\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NZ_CP016282.1\|WP_066593000.1\|691485_692784_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224005
NZ_CP016282.1\|WP_066593003.1\|694716_695634_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066598917.1\|692843_693230_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|180142
NZ_CP016282.1\|WP_066593007.1\|697068_697551_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP016282.1\|WP_066593002.1\|693230_694544_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_CP016282.1\|WP_066593010.1\|697547_697820_+\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP016282.1\|WP_066593021.1\|704740_706054_+\|class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|225174
NZ_CP016282.1\|WP_066593016.1\|702173_703937_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP016282.1\|WP_066593011.1\|699780_700614_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|236183
NZ_CP016282.1\|WP_066592995.1\|686129_687251_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133003
NZ_CP016282.1\|WP_066593019.1\|704039_704699_-\|septum-formation-inhibitor-Maf	unknown	unknown	gnl\|CDD\|178901
NZ_CP016282.1\|WP_066592993.1\|684896_686051_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340842
NZ_CP016282.1\|WP_066592988.1\|683827_684280_-\|succinate-dehydrogenase-hydrophobic-membrane-anchor-subunit	unknown	unknown	gnl\|CDD\|239580
NZ_CP016282.1\|WP_066598919.1\|697861_699556_-\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP016282.1\|WP_066593014.1\|700677_702117_+\|NAD(P)H-quinone-dehydrogenase	unknown	unknown	gnl\|CDD\|236112
NZ_CP016282.1\|WP_066592998.1\|688715_690233_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226364
NZ_CP016282.1\|WP_084020614.1\|690229_691489_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226962

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_084020612.1\|684292_684709_-\|succinate-dehydrogenase,-cytochrome-b556-subunit	gnl\|CDD\|239581	cd03501, SQR_TypeA_SdhC_like, Succinate:quinone oxidoreductase (SQR) Type A subfamily, Succinate dehydrogenase C (SdhC)-like subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Members of this subfamily reduce low potential quinones such as menaquinone and thermoplasmaquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are similar to the Thermoplasma acidophilum SQR and are classified as Type A because they contain two transmembrane subunits as well as two heme groups. Although there are no structures available for this subfamily, the presence of two hemes has been proven spectroscopically for T. acidophilum. The two membrane anchor subunits are similar to the SdhD and SdhC subunits of bacterial SQRs, which contain heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	4.49511e-39
NZ_CP016282.1\|WP_066592997.1\|687457_688558_+\|BMP-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380577	cd06354, PBP1_PrnA-like, periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. The PnrA lipoprotein, also known as Tp0319 or TmpC, represents a novel family of bacterial purine nucleoside receptor encoded within an ATP-binding cassette (ABC) transport system (pnrABCDE). It shows a striking structural similarity to another basic membrane lipoprotein Med which regulates the competence transcription factor gene, comK, in Bacillus subtilis. The members of PnrA-like subgroup are likely to have similar nucleoside-binding functions and a similar type 1 periplasmic sugar-binding protein-like fold.	3.423e-85
NZ_CP016282.1\|WP_066593004.1\|695944_697039_+\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	1.98642e-130
NZ_CP016282.1\|WP_066593000.1\|691485_692784_+\|ABC-transporter-permease	gnl\|CDD\|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	1.21221e-92
NZ_CP016282.1\|WP_066593011.1\|699780_700614_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|236183	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional.	3.29676e-117
NZ_CP016282.1\|WP_066598917.1\|692843_693230_+\|cytidine-deaminase	gnl\|CDD\|180142	PRK05578, PRK05578, cytidine deaminase; Validated.	2.34018e-67
NZ_CP016282.1\|WP_066593007.1\|697068_697551_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	1.19697e-24
NZ_CP016282.1\|WP_066593002.1\|693230_694544_+\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_CP016282.1\|WP_066593010.1\|697547_697820_+\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	5.00507e-24
NZ_CP016282.1\|WP_066593021.1\|704740_706054_+\|class-I-SAM-dependent-RNA-methyltransferase	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	4.22565e-66
NZ_CP016282.1\|WP_066593016.1\|702173_703937_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP016282.1\|WP_066592995.1\|686129_687251_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133003	cd02509, GDP-M1P_Guanylyltransferase, GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.	1.23398e-113
NZ_CP016282.1\|WP_066593019.1\|704039_704699_-\|septum-formation-inhibitor-Maf	gnl\|CDD\|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	1.50833e-81
NZ_CP016282.1\|WP_066592993.1\|684896_686051_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340842	cd03814, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	3.77089e-99
NZ_CP016282.1\|WP_066592988.1\|683827_684280_-\|succinate-dehydrogenase-hydrophobic-membrane-anchor-subunit	gnl\|CDD\|239580	cd03500, SQR_TypeA_SdhD_like, Succinate:quinone oxidoreductase (SQR) Type A subfamily, Succinate dehydrogenase D (SdhD)-like subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Members of this subfamily reduce low potential quinones such as menaquinone and thermoplasmaquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are similar to the Thermoplasma acidophilum SQR and are classified as Type A because they contain two transmembrane subunits as well as two heme groups. Although there are no structures available for this subfamily, the presence of two hemes has been proven spectroscopically for T. acidophilum. The two membrane anchor subunits are similar to the SdhD and SdhC subunits of bacterial SQRs, which contain heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	4.08371e-35
NZ_CP016282.1\|WP_066598919.1\|697861_699556_-\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP016282.1\|WP_066593014.1\|700677_702117_+\|NAD(P)H-quinone-dehydrogenase	gnl\|CDD\|236112	PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed.	0
NZ_CP016282.1\|WP_066592998.1\|688715_690233_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226364	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only].	0
NZ_CP016282.1\|WP_084020614.1\|690229_691489_+\|ABC-transporter-permease	gnl\|CDD\|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	5.61642e-81

>NZ_CP016282.1|WP_066593002.1|693230_694544_+|thymidine-phosphorylase
MSSTARSIEAFDAVDLIHAKRDKGELSTPQIDWLIDAYTRGYVGDEQMAAMTMAIFLNGMSRREIRDMTMAMINSGERMSFAGLGKPTTDKHSTGGVGDKITLPLMPLVAVFGAAVPQLSGRGLGHTGGTLDKLESIPGWRANLSNEEMFAQLQDVGGVICAAGSGLAPADGKLYALRDITGTVEAIPLIASSIMSKKIAEGTSALVLDVKFGSGAFLKDIERSRELARTMVALGEDAGVATSALLTNMNVPLGLAIGNANEVRESLEVLAGGGPADVVELTVALAREMLTLAGIVDVDVEAALKDGRAMDKWNAVIRAQGGDPTAAMPVAKETHTVLADRDGVLVEQQALPFGIGAWRLGAGRARKQDPVQHAAGIDLHAKPGDTVRKGEPLFTLSADEPERFARALEAVEGAWRIGDPGEPVLDGGPLIAERITR
>NZ_CP016282.1|WP_066598917.1|692843_693230_+|cytidine-deaminase
MLRTAAAEAMTHAYVPYSKFPVGAAALVTDGRVISGCNVENASYGLTLCAECALVSVLHLTGGGQLVAFSCVDGDGNTLMPCGRCRQLLYEHSAPGMLLETVSGVRTIDEVLPDAFGPRQLAAYREDH
>NZ_CP016282.1|WP_066593000.1|691485_692784_+|ABC-transporter-permease
MSTIAPVNQPTQPSEPHEGPATAVIKSWKVPIILGIFTVLGFLLLVVFGRSGTSTMVLSTSSDLIQLPDVPLPTLPTGIVVTVLLALITGLSAWMVQTRRKVPLWLISVFAFLLLLGFLAWASADARIPVPGLLFGSLSLAVPLIFGALGGVISERVGVVNVAIEGQLLAGAFTSAVVASVTQQPLLGLLAAMVAGVLVSFVLAAFSIKYFVDQVIVGVVLNVLVTGLTGFLFSQVLAPNASLLNQPPKFERINIPLLSEIPIIGPVFFRQTLIVYIMYIAVALVYYGIFHTRWGLRLRSVGEHPQAADTVGINVTGTRFWNVSLAGAVAGLGGAYFTLGSVGAFGKEMTAGAGFIALAAVIFGRWDPIRATLAALLFGFASNLQNVLSIIGSPVPSEFMLMLPYLVTIFAVAGLVGKSRGPAASGKPYIKS
>NZ_CP016282.1|WP_084020614.1|690229_691489_+|ABC-transporter-permease
MSAAQQPTPTPAPAEPTEPSRWHNIFREITTGNAIISVLAVVLALLVGAVMIAFTNDAVQESAGYFFSRPGDLIGAVWNSVSGAYSALFQGSVYNFRRPSFADGIKPLTETFTYATPLIAAGLGVALGFRVGLFNIGGRGQMLIAATLGGWVAFALELPAGIHMIAALVAGVLGGALWGGLVGLLKARTGAHEVITTIMLNYVAFYLVSFLLRDGFLKTPGSNNPKSPATKETAVFFDILGPNYNLHFGFILVIAATFFVWWLLGRSNLGFKFRAVGENPNAARVAGISVQRMYVYAMLFSGGLVGLAGINQVLGTTTSGFGAGIDSGIGFDAITVALLGRSKPWGVFAAGILFGAFKAGSFSMQAAEGVPIDIVLVVQSLIVLFIAAPPLVRAIFRLPAPGAPRRRPVPNVTQEVVAK
>NZ_CP016282.1|WP_066592998.1|688715_690233_+|ABC-transporter-ATP-binding-protein
MKLELRGITKRFGALVANDDINLTIEEGEIHALLGENGAGKSTLMNVLYGLYRAEEGEILLDGVAQHFTGPGDAMAAGIGMVHQHFMLIPVFTVAENVMLGHEQTKVGGRLDLPAARKRVREISDRFGFNVDPDALVENLPVGVQQRVEIIKALSRDAKVLVFDEPTAVLTPQETDELMNIMRQLKAAGTSIVFITHKLREVREVADRITVIRLGKVVGTASPTASNEELATLMVGRAVDLTVDKAPATPGAPALVVTNLTVIDPLGQILVNDVSFDVKVGEILAIAGVQGNGQTELTEALMGLQPRVVGEITLDGKSLRGHSVRQVLDAGVGFVPEDRTRDGLVGGFTIAENLMLDRSNKLPFVKRFNVQLSYLADFARAKVKEFDVRSQGIETPVGRLSGGNQQKVVLARELSRDLRLFVAAQPTRGLDVGSIEFVHERIVATRDAGTPVIVISTELDEVAALADRIMVMYSGRIVGIVPGDTPRSVLGLMMAGETPAEGAAA
>NZ_CP016282.1|WP_066592997.1|687457_688558_+|BMP-family-ABC-transporter-substrate-binding-protein
MTITTRKATLGGLASLGVLALLAACAPAPTTSGSSDSANADFLPCIVSDFGGFDDKSFNQSSFDGMKKASEELGVEFKQAESTSEDQYAGNVTSMVDQGCNFILTVGFALANATRDAAQANSDVEFAIIDSALSNDDFSPLTLDNVKPVLYDTAQAAFLAGYLAAGTTKTGTVGTFGGMQYPSVTIFMDGFADGIAYYNDAKGTDVKLTGWDKATQSGLFAGGFDDINQGKTLSAGLIDAGADIILPVAGPLFQGTAQAINESGKDVAIVGVDSDLFETTPEFAALYLTSIMKSMTDATDAIVTDAANGDFSSDPYVGTLENEGVGLAPLHDWESKVDPALVTELDDLKAQIISGDIVVTSDATPK
>NZ_CP016282.1|WP_066592995.1|686129_687251_+|NTP-transferase-domain-containing-protein
MSHSSDALDRFYSVIPAGGIGSRLWPLSRADAPKFLHDLTGSGQTLLRATWDRLAPLAGDQRIMVVTGRAHRAAVEEQLPELADLNVVLESEPRDSSAAIGLAAAILERREPGVIIGSFAADHVIKGPAAFRQAVVEAIAAADTGLIVTIGIQPTEPAIGFGYIKTGGPLDIDGAPSAQSVNSFVEKPSPATAKRYLSSGQYLWNAGMFIARADRLLEEIGASEPELLAGLLELAEAWDTPRRGAVVDQVWPKLKKIAIDYSVAEPAAVKGKLAVIPGQFDWDDVGDFASIAKIHANGRKRDLAILGEGARVLADSSSGIVVSHTKRMIALIGVDDIVVVDTPDALLVTTSANAQKVKAVVDALRLSGSSDVL
>NZ_CP016282.1|WP_066592993.1|684896_686051_-|glycosyltransferase-family-1-protein
MRVAVVSESFLPTVSGVTTSVCKVLGELRRTGHEAMVVAPFGAPDSYAGFPVHTVPALSYRQFPVGLPNPRVLGLLADFQPDVLHAASPFLLGAQGIAAARRLGVPSVAVFQTDVAGYAHRNHLGQATRLAWWFVKWVHDGADLTLVPSEASMRDLRRIGVANLDRWTRGVDLDGYHPNNRRDPRVAALRQTLAPAGEVVIGYVGRIAPEKQVERFRALRGLPGISIALVGDGPSTPLVARALAGMPVTWLGRLAGPELAAAYAAFDVFLHAGTEETFGQTLQEAHAAGLPVVAPRAGGPIDLVDHGTDGFLFQPDDDADLRRHVAALVADRSLRHRMGEAGRRAVLGRSWENVCGTLFDYYQRVIDEGLARRAETLVPLAQRR
>NZ_CP016282.1|WP_084020612.1|684292_684709_-|succinate-dehydrogenase,-cytochrome-b556-subunit
MPQNSAGALTAQRKTTSRRPAGTLYRGREGMWSWVLHRITGVAIFFFLLVHILDTALVRVSPEAYNAVISQYQTPIMGLGETALVAAIVFHAFNGLRIIAIDFWNAKYQRVLFYVVIGLWLVTMIAFVPRHLINVFSH
>NZ_CP016282.1|WP_066592988.1|683827_684280_-|succinate-dehydrogenase-hydrophobic-membrane-anchor-subunit
MTSTLAAPRSPYARTPHKRGVNWEKWGWIYMRVSGIVLVVLIFGHLFVNLMVGEGVSALNFAFVAGKLANPFWQWWDVAMLWLALIHGGNGMRTLVNDYATTRVGRGILKSAILAAVVILIVLGTLVVFTFDPCPAGAPTDLLPTFCQAL
>NZ_CP016282.1|WP_066593003.1|694716_695634_-|hypothetical-protein
MRKRTELPRILSLDGFTVADARREGVTAKRLHATDLEAPFHGVRIAAGGPAGVWELTRAYSSIMPTTHFFSHVTAALLLGMPLPRYARQDLPLHVSVVAPDRAPQGTGVAGHTVAGRPEVWRVRGLTVQNPVSTWCELAPLVGLDDLIALGDHLLGVMDPPYTPDDLARAVAARTGHRGIRRLRAAAEWVRPRVESRQETRLRLLIVRAGLPEPETNVYLPLRYQRRRVRGDLVYLRYRTLVEYDGGQHRTDDAQFARDVDRLDGVMAEDWRVIRVLKETPDAEVLARLEQALRSRGWRPGIRPD
>NZ_CP016282.1|WP_066593004.1|695944_697039_+|adenosine-deaminase
MPGSGVSINALPKVSLHDHLDGGLRPATIIELAEAIDLDLPADTENDLADWFTAQATSGSLVDYLKTFDLTVAVMQTHDSLARVAREFVEDLALDGVIYGEIRWAPEQHLTAGLSLDQAVDAVQEGIEAGIDRVAQAGLVIKIGQVITAMRHADRSLEVAELAVRHRDLGVVGFDIAGAEQGFPAADHTEAFDFLARNLFPVTVHAGEADGLDSIRGALFDGRALRLGHGVRLAEDIEIGREDQDNTYVTLGPLAQWVRDREIPLELSPSSNLQTGAIAAWGDDMLDHPFDLLYQLGFRVTVNTDNRLMSGTSLSRELALLTDAFGYDLDDLEALQLNAASSAFLPLEEREELADAIVDGFANA
>NZ_CP016282.1|WP_066593007.1|697068_697551_+|PTS-sugar-transporter-subunit-IIA
MSLPPLPLDAIDVGLHVPDWRAAIGAAGAALERSGSTAPGYTERMVGVIEEFGAYVVIAPGLALAHARPGPDVLTEGLSVVTLADPVAFGHPHNDPVSVVLGLAVTTGDEHVHFVAELANVFNDSSIIPALAAAPDAETVRSLLGIAAPTGHAATEEESS
>NZ_CP016282.1|WP_066593010.1|697547_697820_+|PTS-sugar-transporter-subunit-IIB
MKIVALCGVGIGTSAILKVNAERALERLDIQADVTAADIASVKLAAADAQVILTSSELVPSIGKTNADVIIIDNFFDLDELTAKLETALG
>NZ_CP016282.1|WP_066598919.1|697861_699556_-|phospho-sugar-mutase
MGELILTATAWLAQDPDPETRAELRVLLQQAQDRDPAAVADLHSRFDERLAFGTAGLRGEIAAGSNRMNRVLVSQAAAGLAAFLLEQAPTVRPGGIPSVVIGYDGRRNSHVFATDTAAIMAGAGVRAILLPRLLPTPVLAFAVRYLGASAGVMVTASHNPPNDNGYKVYLGDADAGSQIVSPDDVAIAAQIQRVADTLLVSDLPRAAYETAPESVVQAYVDATAAIARPPRAQVNAVYTALHGVGWDTTRRVLDAAGFALPTLVDAQIAPDSAFPTVAFPNPEEPGAMDLAYETAREVGAELIIANDPDADRLAIAIPDADAAEGYRRLSGNEIGAILGWRAAVEAQNAPGDGGANGTLACSIVSTPALKAVADAYGLAFADTLTGFKWVSRAPGLIFGFEEALGYLVNPGTVRDKDGISAAVALLSLVSDLKADGSTLAEHLDAFSEKFGHFASGQISVRVTDLTEIDRVMARLRDSPPAMIGSSRVDHIDDLSQGFNGLPPSDVLRIVLTDGSRVMVRPSGTEPKLKVYLDTSSAVGSVAERRLAASDALAELDRGMRALIG
>NZ_CP016282.1|WP_066593011.1|699780_700614_-|purine-nucleoside-phosphorylase
MLTTEINPLDAPETNPFDVAKIAAQEIADATGVDHHDIALTLGSGWGKAADLIGETTHTIPAQEITGFSAPALAGHAGMLRSVLLPTGKRALVIGARTHYYEGHGVRRVVHSVRTAAATGATTMILTNGAGGIRETWTPGTPVLISDHINLTADSPLEGATFIDLTDLYSQRLRDLARGIDASLDEGVYCQFRGPHYETPAEVQMAKAIGGHIVGMSTALEAIAARQAGMEILGMSLITNLAAGIQKTPLSHGEVLEAGQQAEATISALLAKIVASL
>NZ_CP016282.1|WP_066593014.1|700677_702117_+|NAD(P)H-quinone-dehydrogenase
MSYEFERKQRIAIIGGGPGGYEAALAGAQQGAEVTLIERVGVGGAAVLTDVVPSKSLIATAEASNSIREATDLGVQFFVRGDTGKPLHPEVAINLAAVNKRLLALAREQSEDMRATLVKAGVKLQSGHGRLDGRDAVIVSTGDDGSGTDFDRIEADTIVLSVGGSPRTLPSMMPDGERILTWTQLYNLKSVPKHLIVVGSGVTGAEFASAYRALGAEVTLISSRDQVLPGEDADAAAVIENVFTRNGMVVLSKSRAASAERTTTGVTVTLSDGRTVEGSHCLIAVGAVPNTTGLGLVEAGVQLDESGHIRVNRVARTSIPNIYAAGDCTTEMPLASVASMMGRTAVYHAMGDAVKPIDVRNVAANIFTQPEIATVGWAQKEIEEGLRRGEVYKMPLEANPRAKMMGITDGFVKLIASRGTGTVIGGVIVGPKASELIFPLTLAVEHGLTVDEVAEAFTVYPSLTGSITDAARAMHKVHY
>NZ_CP016282.1|WP_066593016.1|702173_703937_-|ATP-grasp-domain-containing-protein
MSRITKVLIANRGEIAVRVIRAAKDSGILSVAVYADQDRDALHSRLADEAYGLDGTTSAETYLVIEKILSIARRSRADAVHPGYGFLAENADFARAVIGAGLIWIGPSPEAIEQLGDKVSARHIAEKVHAPMAPGTLNPVADASEVLDFVDQHGLPVAIKAAFGGGGRGLKVARTREEVPELFDSAVREAIAAFGRGECFVEKYLDKPRHVETQCLADAHGNVVVISTRDCSLQRRHQKLVEEAPAPFLTEAQTTEMYRASKAILKEVGYVGAGTCEFLIGQDGTVSFLEVNTRLQVEHPVSEEVTGIDLVREQFRLAEGGVLDYDDPIAVGHSFEFRINGEDAGRGFMPAPGPVHVFRPAGGPGVRVDSGVQSGDEISGSFDSLLAKLVVTGATREQALERARRALDEFEVAGLPTVLPFHRMIVRDPAFAPADGAPFSIYTRWIETEFDNTIAAWSGTVEDRPRSDARHSVVVEVDGRRIEVSLPSRLLPGTASEKTAGPAPRRRTAAHSVSASTGDAVKAPMQATIVKILVAEGDTVVKGDLLLVLEAMKMEQPLTAHKDGVIGAIGADVGATVSSGHLLLTVS
>NZ_CP016282.1|WP_066593019.1|704039_704699_-|septum-formation-inhibitor-Maf
MRLYLASTSPARLSLLRAAGIEPATISPEVDEDAVAEAEAVRTGAPLTPHHVVELLARAKAEAVAADGATHGIDGLILGGDSVFVLDGVIYGKPHTPERARERWQGQRGRTGQLFSGHWLIEYVDGKPGRAVGAVAQASVTFADDIPDAELDAYIATGEPLLVAGAFTIDSLGAPYITRIEGDPSTVVGLSLPTLRRLVSRLGYDWPSLWNRGTSALPD
>NZ_CP016282.1|WP_066593021.1|704740_706054_+|class-I-SAM-dependent-RNA-methyltransferase
MGTNTNNQARQGNPEGEIGTELELDVTNVAHGGIFVARHEGRVVFVSDTMPGERVRARLTDANKKSFWRAETVEVLEAAPERQPHIWAAAAIDRDPADRAGGAEFGHIELGHQRELKRQVLADALHRMAGIDTDVTVEPVAVAADASPGDAMDGTGWRTRVRLHVTDTGIVGPYAARSHRVIPVDDLPLAVHALEMAAPLDRLFAGAASVDVVAPSVGPVQILPAEQDDKGRRRRTAPNPITELVGDREFGLDAAGFWQVHARAAETLFSAVQDAIDPDLFDPKAANLDLYGGVGLLAAAVGERFGPSVRITSVESDAQATGYAAENLAEWVGAAAQTDRVDRFLAGLARDAKNADQGRQQAATVVLDPPRSGAGADVVDKLAFLSPAQVVYVACDPVALARDIALFAGYGYTLKTLRAFDLFPNTHHVEAVALLTK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_4

983260-983361

Orphan

Consensus_repeat	Method
CCATCTCGTCGGTCGAGCTTGTGGA	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP016282_4

>merge|NZ_CP016282|4|983260-983361|CRISPRCasFinder
CCATCTCGTCGGTCGAGCTTGTGGACTTGTGCTGAGCCTGTCGAAGTAGACCCGGTGACCCGGTTTGCGGTTGATGACCATCTCGTCGGTCGAGCTTGTCGA

>NZ_CP016282|4|4|983260-983361|CRISPRCasFinder
CCATCTCGTCGGTCGAGCTTGTGGA	CTTGTGCTGAGCCTGTCGAAGTAGACCCGGTGACCCGGTTTGCGGTTGATGA
CCATCTCGTCGGTCGAGCTTGTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_157109115.1\|984880_985579_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_157109116.1\|986013_986493_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_084020682.1\|980223_981267_-\|asparaginase	unknown	unknown	gnl\|CDD\|377601
NZ_CP016282.1\|WP_066593832.1\|987890_988556_+\|DUF1949-domain-containing-protein	unknown	unknown	gnl\|CDD\|129359
NZ_CP016282.1\|WP_084020684.1\|985582_985897_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP016282.1\|WP_066593787.1\|975977_977201_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270308
NZ_CP016282.1\|WP_157109117.1\|987121_987868_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066593813.1\|982742_983231_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|224678
NZ_CP016282.1\|WP_066593834.1\|989114_989474_-\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|223713
NZ_CP016282.1\|WP_084021364.1\|989540_990224_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP016282.1\|WP_066593794.1\|978409_979327_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP016282.1\|WP_066593774.1\|971654_974606_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274860
NZ_CP016282.1\|WP_084020686.1\|988587_989118_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176905
NZ_CP016282.1\|WP_084020680.1\|970957_971557_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238017
NZ_CP016282.1\|WP_066593828.1\|986485_987052_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066593806.1\|981269_982652_-\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|235685
NZ_CP016282.1\|WP_066593790.1\|977204_978407_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP016282.1\|WP_066593784.1\|974602_975730_-\|alanine-dehydrogenase	unknown	unknown	gnl\|CDD\|240630
NZ_CP016282.1\|WP_084021363.1\|979389_980133_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP016282.1\|WP_066593815.1\|983405_984749_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|235685

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_084020686.1\|988587_989118_-\|SRPBCC-family-protein	gnl\|CDD\|176905	cd08896, SRPBCC_CalC_Aha1-like_3, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins. SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of a functionally uncharacterized subgroup of CalC- and Aha1-like proteins. This group shows similarity to the SRPBCC domains of Micromonospora echinospora CalC (a protein which confers resistance to enediynes) and human Aha1 (one of several co-chaperones which regulate the dimeric chaperone Hsp90), and belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	1.0268e-73
NZ_CP016282.1\|WP_084021364.1\|989540_990224_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.21668e-46
NZ_CP016282.1\|WP_084020682.1\|980223_981267_-\|asparaginase	gnl\|CDD\|377601	pfam06089, Asparaginase_II, L-asparaginase II. This family consists of several bacterial L-asparaginase II proteins. L-asparaginase (EC:3.5.1.1) catalyzes the hydrolysis of L-asparagine to L-aspartate and ammonium. Rhizobium etli possesses two asparaginases: asparaginase I, which is thermostable and constitutive, and asparaginase II, which is thermolabile, induced by asparagine and repressed by the carbon source.	1.61906e-116
NZ_CP016282.1\|WP_066593832.1\|987890_988556_+\|DUF1949-domain-containing-protein	gnl\|CDD\|129359	TIGR00257, IMPACT_family_member_HI_0722, uncharacterized protein, YigZ family. This uncharacterized protein family includes YigZ, which has been crystallized, from E. coli. YigZ is homologous to the protein product of the mouse IMPACT gene. Crystallography shows a two-domain stucture, and the C-terminal domain is suggested to bind nucleic acids. The function is unknown. Note that the ortholog from E. coli was shown fused to the pepQ gene in GenBank entry X54687. This caused occasional misidentification of this protein as pepQ; this family is found in a number of species that lack pepQ. [Unknown function, General].	8.46649e-53
NZ_CP016282.1\|WP_084020684.1\|985582_985897_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.2259e-14
NZ_CP016282.1\|WP_066593787.1\|975977_977201_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.92709e-95
NZ_CP016282.1\|WP_066593813.1\|982742_983231_+\|peroxiredoxin	gnl\|CDD\|224678	COG1764, osmC, Organic hydroperoxide reductase [Secondary metabolites biosynthesis, transport and catabolism].	3.01723e-18
NZ_CP016282.1\|WP_066593834.1\|989114_989474_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	2.3537e-13
NZ_CP016282.1\|WP_066593794.1\|978409_979327_+\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	9.60369e-64
NZ_CP016282.1\|WP_066593774.1\|971654_974606_+\|hypothetical-protein	gnl\|CDD\|274860	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain. This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking].	2.1453e-66
NZ_CP016282.1\|WP_084020680.1\|970957_971557_+\|FHA-domain-containing-protein	gnl\|CDD\|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	0.000640923
NZ_CP016282.1\|WP_066593806.1\|981269_982652_-\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|235685	PRK06058, PRK06058, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP016282.1\|WP_066593790.1\|977204_978407_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.5884e-153
NZ_CP016282.1\|WP_066593784.1\|974602_975730_-\|alanine-dehydrogenase	gnl\|CDD\|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0
NZ_CP016282.1\|WP_084021363.1\|979389_980133_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	9.51702e-61
NZ_CP016282.1\|WP_066593815.1\|983405_984749_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|235685	PRK06058, PRK06058, 4-aminobutyrate--2-oxoglutarate transaminase.	0

>NZ_CP016282.1|WP_066593813.1|982742_983231_+|peroxiredoxin
MIGAHHYAVQTQWTGNRGTGTSSYRTYGREHTLTSAGKEPIAGSADRTFHGNADRWNPEELLLAALSQCHMLSYLHVAVNHGVIVVDYSDDAIGTMAQTADGGGHFTAATLRPRVTIADPDQAELAESLHAEAAKACFIAASVNFPVGHEAVTIVAAPASVL
>NZ_CP016282.1|WP_066593806.1|981269_982652_-|4-aminobutyrate--2-oxoglutarate-transaminase
MTDTLTDSAASSSTPAPVYSVSQERKIVTAIPGPRSTEMHQRRLAAVSTGVSSALPVYIKKASGAIVVDLDDNQFIDLGAGIGVTTVGHSETSVVAAATDQLGDFVHTLFTITPYEEYVRVAELLAAHTPGSFAKKSVLINSGAEAVENGVKIARKYTGRRAVAVLDHAYHGRTVLTMAMNYKAAPYATGYGPLASDVYHAPNSYPYHDGLTGEQAAARTIAYLEKVIGASDLACLVVEPIQGEGGFMVPAEGYLPLLQEWCTANGVVMIADEIQSGMARTGAYFASEHFGWEPDLVLVAKGIAGGMPLAAVTGRAEILDASQPGGLGGTFGGNPVACAAAIAVFDAIERNNLLAEGQRIEKTLRAGLTALADKHDIIGDIRGRGAMIAIELVQPGTQTTTKAPNAAAVTAIAAYAAQHGVLLLTAGTYGNVLRFLPSLAVTDALLADALSVIDDAMATL
>NZ_CP016282.1|WP_084020682.1|980223_981267_-|asparaginase
MTSTTSSAAFGAAGPSGSAGTIEVIDSVELAVVERSGFIESRHAGAAVLLGSDGAVLRALGDVNAPVFPRSSMKPFQAIAVMASGVVLRGEDAAIATSSHSGTQKHTDLVRGLLARAGLSEADLGCTPTWPGDSATRDGLVRQGAGPAPIYSDCSGKHAAMLVACVQNHWPIVGYLDPEHPLQKRILDVVERFTGERPTASGVDGCGAPVHALSLTALARGIARIATSKSTSPFAIYREAGFLAEAVRENGWVIAGPGLPDSIAIERLGLFVKGGAEGIMVASADNGMTVALKILDGNLRAATIVALSLLADAGAVPRSEVDAIIPELKLAVFGGGQPIGQIRASYV
>NZ_CP016282.1|WP_084021363.1|979389_980133_+|ABC-transporter-permease
MIPIVYTFVFSFNDSLKSNITWRGFTFDKWLNVCAVQNGAVCEAFGNSLIIGVVATVIATTLGTMIAIALVRYRFRFRAGTSLLLFLPMATPEVVLGAGLAAQFLSLGVPKDMLTIILAHTMFCISFVVVTVKARVAGLDPALEEAGRDLYGSPAQVFARITFPLLLPGILAAALLSFALSFDDFIITNFNSGAVTTFPKYIYISASRGIPAEANVIASAVFILALVIVVTAQVSAAARAKRQARQG
>NZ_CP016282.1|WP_066593794.1|978409_979327_+|ABC-transporter-permease
MAFAAFSSTAAPPADAPPRRRSNVALLLLLPGILYLVLFFLAPLVSLILTSLQAPTEFGDIGMYSYAFRWENYVAVIEQYWPHILRSFGYAIVATVLALAFSYPLAYFIGVTARKWPLLQSLMLVLVIAPFFISFLLRTLAWKQILSDESFLVTSLKAVSLLAPDAHLTGTAFSVIFGLTYNFIPFMTLPLYTTLERLDLRYLEAGNDLYASGFHTFRTVTIPLSMPGIVAGTLLTFIPAAGDYINASRDFLGGADTQMIGNVIEANFLVLLNYPAAAALSIILMTVILVIVGVYVKRSGTEELL
>NZ_CP016282.1|WP_066593790.1|977204_978407_+|ABC-transporter-ATP-binding-protein
MATGAFADRGADLELVGIQKRFPGFTAIEHLNLVIPAGSFFALLGPSGCGKTTTLRLVAGLEDPTGGRILIGGQDVTGQKAYQRPVNTVFQSYALFPHMTVLENVAFGLRRRKIADAVAKAHEALRLVELDHLAARKPVQLSGGQQQRVALARAIVNRPALLLLDEPLGALDLKLRRQMQLELKTIQEEVGLTFLHVTHDQEEAMTMADTIAVMNKGRIEQMGTPELLYELPRTAFVANFLGQSNLFTGAVVGETSTSIAVDVAGRSIVVPKARSHRHAGDVTVGVRPEKITLHRQKPEPDPAHNVIGPGRVTDVSFTGVSTQYLVTVPGVGTIIVFEQNRSFGPVEGEGDEVWMTWNVEHGFGLDDDPAGPDPKFVADTTTKSIAAQRRAALVTELEEA
>NZ_CP016282.1|WP_066593787.1|975977_977201_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MQGDRPMALPADPMIRQLVQQAQRAQMGRRALLAGAGAGAAALALAACSTGSAARPTAATDKSASEKTLRWDNWALYIDVDDAGNYPTLEAFTAETGIKVNYTEAVDDNNTYYGKVKDQLALGKDIGADTVCLTDWMVGRLARFGYLQELDHANIPNLANLLPNLKDVDFDPGRELSVPWQGGFAGICWNKEKFPDGITSVEQLWSTPELKGRVGVLSEMRDTMGLIMLDAGVDISGDWGDDDFTAAIEVLKKQVSDGQVRNIKGNSYKEDLVNGDSLAAIVWSGDIVQLNAENGDKWGFVVPDKGGTIWNDNFVVPIGSAHKANAEALINYYYDPAVAAEVAAYVNFITPVAGAKEAAMEIDPELADNPLIFPDDATLAKAKVFRTLTGAEEQTYGAEFQSILLGA
>NZ_CP016282.1|WP_066593784.1|974602_975730_-|alanine-dehydrogenase
MRICVPKEIKDNEFRVAITPAGVHDLVLHGHEVLIETGAGLGSSITDDQFSAAGAAILPDAVSTWSAAELLLKVKEPVPSEYGYFRADLVLFTYLHLAAEAGLTRALLDAGVTAIAYETVQLPTRALPLLAPMSEVAGRLAPIVGANAMLKPNGGPGLLVPGVPGTHPARVTVLGGGVAGTAAMQVAIGLGAEVTVLDTNLFRLRELDTLHYGRVKTIASNAFEIETALLQSDLVIGSVLIPGARAPKLVSNELVSRMKAGSVLVDIAVDQGGCFADTHPTTHTEPTFTVHGSLFYCVANMPGAVPSTSTYALTNATLPYVRAIANRGWVDALRADASLALGLNTFGGVLTSAPVATAHALPLTPLAEVLAAPAG
>NZ_CP016282.1|WP_066593774.1|971654_974606_+|hypothetical-protein
MATDSPQLPPADPIRLPTRPTAPDRAAFPLIACVAPLIAAGLIWWITGSALVLVFAVLSPVIAVAGLLDGRWSTARRRRRDAADYAAAMTEAADAVDRALERLRDAAWHQAPSVQTMLERPDEPGRWADPAEAPVVLGAGTVPSGLRLEGAGDAAEHRELRARAAGLAGAPIVVDPAGGIGLIGPGLLLRALARSLVVQLTGQLSPRSLGLRLPDGPDWAWAARLPHHRAESPAQWLTVLDADQTSPPPHRPGDGPWIALAGTGAGLPPGCATVVRVHGPVGAEIVRLAGRPAAVPVAPVLVAESQVAGLGEALGRAADAAGLGGPTGTLPDTVSFAALGAATGAGAASTRVAGPVTELSCAVGLGEHGPLVVDLVRDGPHALVGGTTGSGKSELLVTWVAALASRYDPGQVTFLLVDFKGGAAFDLLRALPHCVGLITDLDEREAHRALASLAAELRHRERVLRDAGARDITDLPSAALARLVIVVDEFATMVAAFPALHAVFVDIAARGRSLGVHLVLCTQRPAGVLRDALLANCSLRISLRVNNRADSQAVLGSDAAALIDAARPGRCALVRGSTPVETAQVAATGDADIRQIANDRPAGPNLPRRPWLDPLPHRVTRAQLAATGAAPPGLLLGLLDEPEHQRYRVAGYDPGVDGNLLVIGGARTGKSTLLAALAEQAPSRVRLVPADVEGTWDALVRAHAELDGLVHTDRATGAHRQEGARESRLLLIDDLDAVLARWGDEHRAAAVDLVTGLLRDGGPSGLRLVITVQRLTGALQMLPALCQSRVVLRLPGVHEHQAAGEPAASYDATLPTGGGRWRGGRIQLLQPEPVGGGSAQPVRRHVDVPSASDTAGPEGVRAVLLVVAGSVARSAAAFQVDGPAGSRRVVELAAGPVAGAGGRIEVSTVAAGTVLVGDADAWQGNWSLLAGLRRTAPLVFDGASLGDYRLLTRRRELPPPLAPGRSRGWLVEPDGTVRRVTLP
>NZ_CP016282.1|WP_084020680.1|970957_971557_+|FHA-domain-containing-protein
MNCQICSAHLPEGAMFCGGCGSSTTATPLTRKRADPRPNDTTIIQPVAPRSTVISVPLWPAGSLQAGTAPAPAPASADAAPEGAGTPAPVVAERYTLQFSTGETVSVRGTGLIGRRPLPQPTERFDHLIQITDLGMSVSKSHLEFGQHDGEFWVNDRFSGNGTVVRRAPAPALRCEPGRRYLVGRGSRVEIGDQFFMVL
>NZ_CP016282.1|WP_066593815.1|983405_984749_-|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MSSSFSVSQERKLVTALPGPRSIALQERRVRAVSAGAGTLANIYMDHGAGAILVDVDGNQIIDLGCGIGVTTIGHAHPEVAAAAAAQAGKLTHTLFTVTPYENYVRVAEKLAEITPGDFEKHSILVNTGAEAVENAVKIARKYTGRRAIVSLDHAFHGRTNLTMAMTYRPWPERVGMGPFPGEIYSVPTSYPYQDGLSGEEAAEKTIDYIQTHIGASEIAAFFVEPIQGDGGIVIPAPGYFKRLSEFCTENGIVFVSDEIQAGIARTGAWYGIEHHGVVPDLVTTAKGIAGGFPLAAVTGRAEIMDAVQPGGIGGTFGGNPVSTAAALAVFDIIERDNLIDEAKRVEKALWARIGDWADKFDIVGDVRGKGAMFGVELVHPGTKKPFPEALAFVLKHATTNGVIALDAGSWDSVLRIMPSVVISEALIDDAASVLEEAFTLFQAAQQ
>NZ_CP016282.1|WP_157109115.1|984880_985579_-|hypothetical-protein
MPNLRLSPDLKVLRPALVTVGVACVTMAVASVVFWPDMAESLVTRAANGRHGESVVQRWFAAGAFPIILLLLTALFAVTPELDRKLRRVIGQKSALNSANGVRVMGYLISGVAIAMTVSHFGLVSAFAGTNFPMAESMAASLGLIVILLGNALPLSRSQDLSLPPYLQRLQDAVGPIYRPAARVLVLIGGATIALAFVSAWAALLLATLGTITLILGIYAVGLARMRSQAKA
>NZ_CP016282.1|WP_084020684.1|985582_985897_-|winged-helix-turn-helix-transcriptional-regulator
MSRNNEEGIFDALANSNRRRILQFLRDKDFVRAGDIARDLEIGHSTLSAHLKVLRHADLVVSRRQGTEIQYRANLTVIEEAIVALSRLRRDDGPQDPPTRGKES
>NZ_CP016282.1|WP_157109116.1|986013_986493_+|hypothetical-protein
MSRQSIILASLAVVGALTLSGCTASAEAAPTESTASAESTESAASAGSTTDAMSCSGFNDTATIIVNADAGVRDGRMAAQEQQGWYRLATRVLDGVPIRGEGAVSDALAGLKTIAPSVTLGAMSTTGIGSAEWYTGQDALSAACADAGSELAVESFTGG
>NZ_CP016282.1|WP_066593828.1|986485_987052_+|hypothetical-protein
MDEVESPELMSIAGAQADVRRIFRGGYSGPLVSAILWAGANTVYFLVSPGAAMAVLFFGGMLIFPLSAVILRLTSGSAMLPKGHPSTALAMQSAFTVPLGLLIAIALGSYEPILFFPASLIIVGAHYLVFMSLYGMRVFAVLAAALLLVGTVGIFVVPEIGAISGWIGAIVFAAFAPVLYRTGVARQV
>NZ_CP016282.1|WP_157109117.1|987121_987868_+|hypothetical-protein
MGIRRGWGLAGTIVAAVLLVSGCAGSAPEATPSPTHTTPPRIEDLITPTPTPTATVPATAEPVAQTVDAGVVAEGTSASASGSGPSNVAYQRQGEFAVVMNIDCSACTGTTTVTEPGRMSPFGEMAAPMSGSFLKDVFKNDPVNQTLIVLAEGPWTVTLQSWNDIPSVSGAQSGIGPAVLFLSDDVPRLTVDYAPASADDSFSGRVFTTSDSPKLFGNTEAFSEVYDVDLPGVMAIQTNGTWMVTPTP
>NZ_CP016282.1|WP_066593832.1|987890_988556_+|DUF1949-domain-containing-protein
MPDLTLRGGVGSRVSAEIDVKRSRFLCRIVRVDTEDAARAAIDAARVEHWGARHHCSAFMVGPSGTPDQVRRSNDDGEPSGTAGRPMLEALAGRGLVDCVAVVTRYFGGTLLGAGGLVRAYSDAVLTTIDLAESRGLLVARERRELFRLALSHADAGRIEAELRQRGVLILGTTYGENAVLSIAGDDAEKLGAIVAQVTAGATELEAIGHEWVDVERESHP
>NZ_CP016282.1|WP_084020686.1|988587_989118_-|SRPBCC-family-protein
MTTSAHPELDLTVSRIIRAPRAAVWNAWADPASFEQWWVPAPTICRVREMDLRPGGSFRTEISDDGLEFGPHITGCFLAVDELQRIVFTDALVAGWRPADASFVTAVMTMTDHPDGTEYTATAMHRNRADRDQHEELGFHDGWGTVIRQLAELAEHDARLEGQSGQERTDSGISSF
>NZ_CP016282.1|WP_066593834.1|989114_989474_-|helix-turn-helix-transcriptional-regulator
MVQHSSTLDGVFQAISDPTRRAVLGRLGSGPASIGELAAPFDMALPSFMKHIGYLERAGLIRTRKTGRVRICTIERDTFIVMESWLNEQRRIWEGRTDRLERFATSPTTDPSRDKETPA
>NZ_CP016282.1|WP_084021364.1|989540_990224_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MAPIARLVFRPRITGKENIPREGRVILASNHLSFIDSIVIPLTAPRRVQFLAKSTYFTGTGFKGWVSRQFFTSIGAIGVERGAGQAAQVALDAGKEVLDVDGAFAIYPEGTRSLDGRLYRGRTGVAWLALTTGAVVVPVGLIGTQEIMPVGSKMPRIRRISVKFGEPIDVSVHGTADSGRARRKATDDIMAAIHGLTGQELAHSYNESPPTTVVQRVKRAIWWRELR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_5

2108054-2108167

Orphan

Consensus_repeat	Method
GCTGGGTCTTCAGGCGCCTGCGCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP016282_5

>merge|NZ_CP016282|5|2108054-2108167|CRISPRCasFinder
GCTGGGTCTGCAGGAGCTGGGTCTTCAGGCGCCTGCGCGACGGGCGCTGGGTCTGCAGGCGCTGAGTCTGCAGGCGCTGAGTCTGCAGGCGCTGGGTCTGCAGGCGCCTGCGCG

>NZ_CP016282|5|5|2108054-2108167|CRISPRCasFinder
GCTGGGTCTGCAGGAGCTGGGTCT	TCAGGCGCCTGCGCGACGGGC
GCTGGGTCTGCAGGCGCTGAGTCT	GCAGGCGCTGAGTCTGCAGGC
GCTGGGTCTGCAGGCGCCTGCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_066595681.1\|2102782_2103907_-\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|234565
NZ_CP016282.1\|WP_066595674.1\|2100940_2101261_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066595691.1\|2111598_2111820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066599552.1\|2108342_2108807_-\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|335420
NZ_CP016282.1\|WP_066595685.1\|2105816_2106764_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234703
NZ_CP016282.1\|WP_157109341.1\|2101270_2102491_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225822
NZ_CP016282.1\|WP_066595669.1\|2098335_2098788_-\|DUF779-domain-containing-protein	unknown	unknown	gnl\|CDD\|377532
NZ_CP016282.1\|WP_066595661.1\|2097182_2097743_-\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
NZ_CP016282.1\|WP_066595663.1\|2097854_2098292_-\|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|235443
NZ_CP016282.1\|WP_066595684.1\|2104602_2105811_-\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
NZ_CP016282.1\|WP_066595709.1\|2115797_2117030_+\|DUF349-domain-containing-protein	unknown	unknown	gnl\|CDD\|377186
NZ_CP016282.1\|WP_066595696.1\|2112397_2113027_-\|30S-ribosomal-protein-S4	unknown	unknown	gnl\|CDD\|235411
NZ_CP016282.1\|WP_066595672.1\|2098893_2100417_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143434
NZ_CP016282.1\|WP_066595693.1\|2111925_2112291_-\|DUF948-domain-containing-protein	unknown	unknown	gnl\|CDD\|377605
NZ_CP016282.1\|WP_066599549.1\|2103899_2104373_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NZ_CP016282.1\|WP_066595711.1\|2117126_2117723_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066595689.1\|2108822_2111477_-\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP016282.1\|WP_066595701.1\|2114785_2115586_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238194
NZ_CP016282.1\|WP_066595712.1\|2117752_2120005_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP016282.1\|WP_084020928.1\|2113264_2114602_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_066595681.1\|2102782_2103907_-\|3-dehydroquinate-synthase	gnl\|CDD\|234565	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed.	1.27366e-158
NZ_CP016282.1\|WP_066595663.1\|2097854_2098292_-\|type-II-3-dehydroquinate-dehydratase	gnl\|CDD\|235443	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase.	2.09677e-79
NZ_CP016282.1\|WP_066599552.1\|2108342_2108807_-\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|335420	pfam03652, RuvX, Holliday junction resolvase. This family of nucleases resolves the Holliday junction intermediates in genetic recombination.	8.62803e-49
NZ_CP016282.1\|WP_066595685.1\|2105816_2106764_-\|hypothetical-protein	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	1.94283e-70
NZ_CP016282.1\|WP_157109341.1\|2101270_2102491_-\|GAF-domain-containing-protein	gnl\|CDD\|225822	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].	9.25213e-26
NZ_CP016282.1\|WP_066595669.1\|2098335_2098788_-\|DUF779-domain-containing-protein	gnl\|CDD\|377532	pfam05610, DUF779, Protein of unknown function (DUF779). This family consists of several bacterial proteins of unknown function.	2.74133e-60
NZ_CP016282.1\|WP_066595661.1\|2097182_2097743_-\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	1.27694e-110
NZ_CP016282.1\|WP_066595684.1\|2104602_2105811_-\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
NZ_CP016282.1\|WP_066595709.1\|2115797_2117030_+\|DUF349-domain-containing-protein	gnl\|CDD\|377186	pfam03993, DUF349, Domain of Unknown Function (DUF349). This domain is found singly or as up to five tandem repeats in a small set of bacterial proteins. There are two or three alpha-helices, and possibly a beta-strand.	1.03235e-11
NZ_CP016282.1\|WP_066595696.1\|2112397_2113027_-\|30S-ribosomal-protein-S4	gnl\|CDD\|235411	PRK05327, rpsD, 30S ribosomal protein S4; Validated.	1.15195e-88
NZ_CP016282.1\|WP_066595672.1\|2098893_2100417_-\|aldehyde-dehydrogenase	gnl\|CDD\|143434	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.	0
NZ_CP016282.1\|WP_066595693.1\|2111925_2112291_-\|DUF948-domain-containing-protein	gnl\|CDD\|377605	pfam06103, DUF948, Bacterial protein of unknown function (DUF948). This family consists of bacterial sequences several of which are thought to be general stress proteins.	9.40295e-16
NZ_CP016282.1\|WP_066599549.1\|2103899_2104373_-\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	1.019e-48
NZ_CP016282.1\|WP_066595689.1\|2108822_2111477_-\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP016282.1\|WP_066595701.1\|2114785_2115586_+\|peptidylprolyl-isomerase	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	1.06221e-35
NZ_CP016282.1\|WP_066595712.1\|2117752_2120005_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP016282.1\|WP_084020928.1\|2113264_2114602_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0

>NZ_CP016282.1|WP_066595685.1|2105816_2106764_-|hypothetical-protein
MADQSGTDPDTTRPSGRRRLAVLGSPIGHSLSPALHQAAYRALGLDWEYTAIEVGALEVGAAEVGARELDTFLDGLGPDWLGLSLTMPLKHEIQHRLSDLDRVAALTGAVNTVRFSDTPGQGRTLSGYNTDVPGLVRALAEAGVDRANRVTLLGAGATAASALVAAAELGAEFVDVIARTPGKAETLETLGRGLGLVVTVTGLDAVDAADRESDLVISTLPGGTALPTEFPSRLRAGTPLFDVGYAPWPSALASSWAAAGGTAYSGLAMLLHQALIQVRIFVANDPFQPLPDEDSVLSAMRAALAAASPAPAVEG
>NZ_CP016282.1|WP_066595684.1|2104602_2105811_-|chorismate-synthase
MLRWLTAGESHGPELLAIVEGLPAGIPVTLDEIRLDLARRKLGYGRGARMKFEQDELNISGGVRHGLTLGGPVALRIGNTEWPKWADVMSPEPVDPALLTRGRGAPLVRPRPGHADLVGMQKYDFDEARPVLERASARETAARVALGAVARAFLAGLGIELVSHTLSIGPVRVPEGSPLPHPSDVDTLDADPLRCFDPATSALMVAEVDAAHKDGDTLGGIVEVLAYNLPPGLGSFVHWDRRLDSQLAAALMGIQAIKGVEVGDGFLTTTRRGSEAHDELVQVDDEIVRASDKAGGTEGGMSTGTVLRVRAGMKPIATIPRALRTVDVTTSEAAPAHHQRSDVCAVPAAGVVAEAMVALVLANSVLEKFGGDSLTETKRNLDSYLASIPANLRTGASSDATV
>NZ_CP016282.1|WP_066599549.1|2103899_2104373_-|shikimate-kinase
MASGKSKIGRRVARLLRVPFIDTDKTIVAAHGPITEIFARHGEPHFRALERDAVADALGRGRAVVSLGGGAVLDPATRERLRGTTVVSLSTTAEAVRSRTRNAKRPLLAAGPDAWQRIYDERRPLYDALASIHFDTSTRPVDAIADDIVKWVRRHHD
>NZ_CP016282.1|WP_066595681.1|2102782_2103907_-|3-dehydroquinate-synthase
MTDLHPEDPTAESGTENGSTTTITVSGVDSYPVYIGRGIVADVAEQLGDTVKKVLIVHTSHLGARAVALRESLLDRYEVLIAEVPDAEPAKRVEVAAFCWQVMGQADFTRTDAVIGFGGGAVTDLAGFVAATWLRGVKLVQIPTSVLGMVDAAVGGKNGINTAEGKNLVGTFYAPAAVVCDLDILADLPRNEILAGFAEIVKAGFIQVPEILDIVEADVAAVTDPTTPQFRRVLELAIAMKARVVGADFKEAGLREILNYGHTLGHAVEHAERYGWRHGAAVAVGMMFAAELARLSGRLSDEAVDRHRRILESLTLPISYPVGRWPTLLATMQRDKKTRSGMLRFIVLDDIGKPTVLEAPDASLLFAAYQEIGS
>NZ_CP016282.1|WP_157109341.1|2101270_2102491_-|GAF-domain-containing-protein
MQGGMRALVRESWQRSISLRLDPLTAQADPTLSSDEVARLRARNPLAGVLPVINTLLVRHATEFGLIVAVADEAGRLLWIDGDSAVRTSAEEMRFVVGADWSEARVGTSAPGTALKLDHGIQIQRAEHFSQLAHQFSCTAVPIHDPVTGAVLGVIDITGGDQAVAPQTLPLVEAAVAALEAELRIQSLSAPRRPAPRPSGFTAPGMLLSVLGTENGSLRGHSGSAPLSPRHAEILLLLAWHRQGLSAERLAAALSEDQPHAVENLRAELVRLRRVLAVDHPRLRIGSRPYRLETDIDTDAGRLLALLRRGAHRMALAAYRGPVLPGSVAPGVVEIRTEVTRRLRETLLSDASVEVLLDYAATDEAAWDSEVWRACRELLPARSPQRAAVLARLVRIEQEVGTASVR
>NZ_CP016282.1|WP_066595674.1|2100940_2101261_+|hypothetical-protein
MDRGRSGGGPLLGATAGLVRHAPPLWRALAVTPLCAVLLGEGLWALTTVADTTSPVYWSLEIVLSVVFLLAAVLRCRLEPRVIPVVVCVWLVGTLAYIGVIVGILS
>NZ_CP016282.1|WP_066595672.1|2098893_2100417_-|aldehyde-dehydrogenase
MTVYAAPGTPGAKVTFKSRYENWIGGEWVPPVRGQYFEDISPVNGKPFTEVARSTHEDIDLALDAAHKAAPAWGKTTATQRAAVLNKMADVIDKNLELLAVAESWDNGKPIREPLNADLPLAADHFRYFAAAIRAQDGDHAELDNDTVSYQFHEPLGVVGQIIPWNFPILMAVWKLAPALAAGNAVVLKPAEQTPASILVLIELIGDILPPGVLNIVNGFGIEAGKPLASSNRIRKIAFTGETTTGRLILQYASANIIPSTVELGGKSANIFFDDVAQKDDSYYDKAQEGFVLFAFNQGEVCTCPSRALLHKPIYDSFLGGAIERTKLAIQGNPLDTDTQVGAQASNDQLEKILSYIDIGKKEGAKLLLGGEQLDLGGDLAGGYYVQPTIFEGQNKMRIFQEEIFGPVVAVTSFEDYDDAISIANDTLYGLGAGVWSRNGNIAYRAGRDLHAGRVWVNNYHNYPAGAAFGGYKSSGIGRENNKLALGHYQQTKNLLVSYSEDALGFF
>NZ_CP016282.1|WP_066595669.1|2098335_2098788_-|DUF779-domain-containing-protein
MTDLITPEPDAPTTPASAVDATITIPGETRSRVALTQATVDLLRSLWEEHGPLMFHQSGGCCDGSSPMCFPAGEFITSDQDVLLGRLDIAPAGDPEQVIDFWISAEQFEYWSHTALLIDTVPGRGGGFSAEAPRGVRFIIRSELMESFAD
>NZ_CP016282.1|WP_066595663.1|2097854_2098292_-|type-II-3-dehydroquinate-dehydratase
MRTVLVLNGPNLGRLGSREPDVYGSANLDDLRALLTAATPDDVTVDLRQTDDEAELIHWLYEAVDTGTPVVLNPAAFTHYSYALRDAAALVTKAGIPLVEVHISNPHARETFRHTSVVSAVATGVIAGFGFDSYRLAVDYIVRLG
>NZ_CP016282.1|WP_066595661.1|2097182_2097743_-|elongation-factor-P
MASTADIRNGVVLNIDKQLWAVIEFQHVKPGKGGAFVRTKLKNVVTGKTVDRTFNAGAKIETENVDRRDFQYLYADGDSYVFMDVADYDQLTVSSTVVGDAANFMLENQAVTVALHDGNPLYVELPASVTLEITYTEPGLQGDRSTGGTKPATVETGYQIQVPLFLEQGTKVKVDTRTGDYLGRVN
>NZ_CP016282.1|WP_066599552.1|2108342_2108807_-|Holliday-junction-resolvase-RuvX
MRVGVDVGTVRIGVARSDFHGMLATPVETVPRQRGTAAPDDLARLTAIVTELDAVEVIVGLPLGLSGRHTASTEDAVAFAAALAGALTVPVRLVDERLSTVSAQAALRTSGRSTRTQRPVVDQVAATIILQHALDTERASGKPAGAPVDTTGRP
>NZ_CP016282.1|WP_066595689.1|2108822_2111477_-|alanine--tRNA-ligase
MQTADIRGRWLDFFADRGHTVVPSASLVSDDPTLLFTVAGMVPFVPYLTGLVPAPYPRATSVQKCIRTNDIEEVGKTPRHGTFFQMNGNFSFGDYFKEQAISYAWELLTSSEADGGYGFAEKDLWVTVYENDDEAFGYWRALGLPEHRIQRLGMDTNYWSTGQPGPAGPCSEIFFDRGPAYGIDGGPATDDDRYVEIWNLVFMQYLRGEGTGKNDFQILGDLPKKNIDTGMGLERVAFLKQGVENMYEIDQVRPVLDRAAALSGRRYGAVHDDDVRMRIVADHVRSSLMLMSDGVMPSNEGRGYILRRLMRRSVRAMRLLGVDTASFTELFPASRDAMSAAYPEVATDFDRISQAAYAEEETFLRTLASGSSVLDLAVAKTKSAQKAELPGDTAFLLHDTYGFPIEITLEMAEEAGLSVNREAFDTLMAKQRAMAKADAKAKKTHLADLSVYSAFRAHGETVFTGYDMLQTESSILGLIVDGASVNRAVAGDIAEVILAETALYAESGGQEADAGLIVGPGYELEVLDVQKPVKGLISHKVQVTSGEVGVGDSATSVVDPDWRRGARQAHSGTHILHAALRQVLGPNAHQSGSYNKAGFFRLDFSWNQALSPATRSEIEEISNNAIRDNLQVTTRELPLAEAKALGAMALFGEKYGDRVRVVDIGGPWSRELCAGTHVSTSSEIGMINLVSEASVGSTNRRVESLVGLEAFRDLAAERAIVSQLTSNLKTPREQLPAKIMDLMQSLKAAEKKIAGFEARALSDRVPALVAAATRIGDLTVVAEDLGVLHSADDVRMLVTGTRERLGSAPAVVALAATVADKPVVIVATNAAARDAGAKAGALAKQLAGILGGGGGGKDDLAQGGGTNVAAIPEALSTLRTLVAR
>NZ_CP016282.1|WP_066595691.1|2111598_2111820_-|hypothetical-protein
MKNFIWLVVGVGVGFVVAHEVNKTQQGKRFFTDLDAKTREFGEAISEGYRKREAELHAALGDAEDTIEELSKP
>NZ_CP016282.1|WP_066595693.1|2111925_2112291_-|DUF948-domain-containing-protein
MTGGDIAGLIAAGVFAVLVAFLAIPLIKLGRVFDETTHAIRDLSQNVTPLLEETTSTIAQTNHQLATIDTITTNVAEVTGNVSALIALVAATVGGPLIKIAGFSAGVTAAFRAARPRRTRK
>NZ_CP016282.1|WP_066595696.1|2112397_2113027_-|30S-ribosomal-protein-S4
MSTKSRTRSKTRLSRALGIALTPKAAKYLEKRPYAPGEHGRTKRKTDSDYAVRLREKQRLRAQYGIREAQLKIAFEEARRRQGLTGENLVEILETRLDALLVRSAIARTTAQARQMVVHRHILVDGQLVDRPSFRVKPGQLIHVKARSEGTEPFQVAAAGGHVDLLPKLPPYLEVELDKLQARLVRAPKRIEIPVTCEVQLVVEYYAAR
>NZ_CP016282.1|WP_084020928.1|2113264_2114602_-|replication-associated-recombination-protein-A
MSSVQPGLRTGATPLAVRMRPKSLAEVAGQRHLLTPGSPLVSLANDKTGEQGSVSVILWGPPGTGKTTLAQTIAHSSGRRFVELSAVSAGVRDVRQVMEDARTSRDLYGLSTVLFLDEIHRFSKAQQDALLPGVENGIIILVAATTENPSFSVISPLLSRSLLLTLETLSDDDLGIVVDRAVTDPRGLADRFVLDPEARGAIIRLASGDARRALTALEAASVSAATTETVDGDKPVITTEIVSLAVDRALLRYDRNGDEHYDVISAFIKSVRGSDVDASLHYLARMIEAGEDPRFICRRIIVLASEDIGMADPQSLVIAIAAADAVQYIGMPEGRIPLAQAVVHLACAPKSNAAYTALDAAIADVRAGNTGRVPKHLRDAHYPGAKRLGHGKGYRYPHDDALGVLAQDYLPTELRRTQYYQPTEHGNERDVSARLAKLRRIIHGE
>NZ_CP016282.1|WP_066595701.1|2114785_2115586_+|peptidylprolyl-isomerase
MAPSSKQDREAREARGRVRAYQARQTVHTLQGKRRVRDNVLAGSILVVVLAVLVGAQLFYFGGGPGTPEPSASSTAEPTPTASATPGANSGDVPSSDLAEGRTWTGTLTLNGIPLGVELDGALAPQAVSSTISLANSGFYDGLSCHRLTTGDGFSVLQCGDPNGDGTGGPGYTYGPVENAPADNVYPAGTIAMARSTDGYSMGSQFFIVYGDTTIPANEAGGYSVIGTVTSGLDQVVSQIAGAGVADGSTDGAPVVPTTITSFTVQ
>NZ_CP016282.1|WP_066595709.1|2115797_2117030_+|DUF349-domain-containing-protein
MTTTDQQPWGRVDETGTVYVREADGERAVGQYPDATPEEALAYFERKYVELNGQVTLLEQRAKGGAPAADIAKSVANLSKSVATANAVGNLAALAERLGALGGTVSELTEQQGVEAKAAGAAALAERAAIVEEAERLAAEDPAKTQWKQTSAALDALFAKWQAHQHDAPRIPKGEANELWKRFRAARTTIEQNRKAFFAELDSAHKDVRNRKQQLIEKAEALAPQGADGIPAYRNLLEDWKAAGRSGKKQDDAMWAKFKAAGDVLYSVKSEIDAADNEEFSANLVVKLELLTEAETLLTETDRVKARELLSSIQRRWDAAGKVPRDQVKPVEERMRKVEAAVRKLDDDHWKRNNPETKARAEGLAGQLHDAIAKLEAELAAAQETKDARKIKDATEALETRKAWLKAIGQ
>NZ_CP016282.1|WP_066595711.1|2117126_2117723_+|hypothetical-protein
MTPLVPVALTGADLPIAELSVARLDGELFSLAGSWCPVDILDEPATRAAALAGLAGSSGPAGPAGPASDRLVAERMTAAWIYGLAPEPAQHQFCVDVTARTRKPDTPNALLREVRLRPGDIRVVGRMLVTVPRRTAVDLARWGSSPAVRADTELLAALLAYDVDARDAGDGLPAFRRGISFSRVAAAQLDRARLRMTG
>NZ_CP016282.1|WP_066595712.1|2117752_2120005_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MTETTTPSPASLRRLVPRIFSRAQPAGAVDTLLRTVRTHHPKVDLSIIERAYTAAERAHEGQKRRSGEPYITHPVAVAQILADLGIGPKTVAAALLHDTVEDTDYTLDQLRADFGDEITMLVDGVTKLDKVKYGDSTQAETVRKMIVAMSKDIRVLIIKLADRLHNARTWGFVPAESAIRKATETLEIYAPLAHRLGIQTIKWELEDLSFGVLYPKLYAEIESLVKQRTPQREEFVQYVIDAINDDLKAARIRGKVAGRPKQYYSIYQKMVVRGREFDEIYDLVGIRVLVNSVRDCYAVLGAIHARWTPLPGRFKDYIATPKFNLYQSLHTTVLGPSGRPVEIQIRTQEMHERAEYGVASHWKYKEQVNGKSSGPGPQSDTDMAWLAHISDWQAETADPNEFLDSLRYEIGAKEVYVFTPKGRVIGLPADATPVDFAYAVHTEVGHRTMGAKVNGRLVPLESSLTTGDVVEVFTSKNPDSGPSQDWLNFVKSPRARNKIRQWFTKERRDEAIEQGRDAIARAMRKQNLPLQKLMNQDSFAEVAAVMRYEDVSALYAAVGEGHVSTQSVLEKVVATLQSVEESDATDLPFTPNGRTQTLRNNDSGILVRGAPDILVKLARCCTPVPGDKIVGFITRGSGVSVHQSDCHNVQALLKEPERMIEVDWAPTSKSLFLVQIQIEALDRSGLLSDVTRVLSEHHVNILSATVNTSSDRLAISRFVFEMGDTTHLDRVLNAVRRIDAVYDVYRVSDG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_6

2606412-2606530

Orphan

Consensus_repeat	Method
CGGGTCTCGACAAGCTCGACCACCGGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP016282_6

>merge|NZ_CP016282|6|2606412-2606530|CRISPRCasFinder
CGGGTCTCGACAAGCTCGACCACCGGGTCTCGACAAGCTCGACCACCGGGTCTCGAAACGCTCGACCACCGGATCACCGCCTGCTTGATCAGCGGGTCTCGACAAGCTCGACCACCGGG

>NZ_CP016282|6|6|2606412-2606530|CRISPRCasFinder
CGGGTCTCGACAAGCTCGACCACCGGG	TCTCGACAAGCTCGACCAC
CGGGTCTCGAAACGCTCGACCACCGGA	TCACCGCCTGCTTGATCAG
CGGGTCTCGACAAGCTCGACCACCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_084021055.1\|2597005_2597785_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274584
NZ_CP016282.1\|WP_066596542.1\|2612304_2612961_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP016282.1\|WP_066596531.1\|2602772_2603609_+\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|238889
NZ_CP016282.1\|WP_084021053.1\|2595905_2597039_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340830
NZ_CP016282.1\|WP_066596541.1\|2611867_2612305_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|281995
NZ_CP016282.1\|WP_066596540.1\|2610565_2611840_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP016282.1\|WP_066596533.1\|2604591_2606406_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
NZ_CP016282.1\|WP_066596524.1\|2597784_2598633_+\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|99790
NZ_CP016282.1\|WP_066596545.1\|2614064_2615543_-\|GntP-family-transporter	unknown	unknown	gnl\|CDD\|182094
NZ_CP016282.1\|WP_066596547.1\|2615605_2616520_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_CP016282.1\|WP_066596543.1\|2612979_2613966_-\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236536
NZ_CP016282.1\|WP_066596538.1\|2609417_2610524_-\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP016282.1\|WP_084021057.1\|2601830_2602706_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP016282.1\|WP_157109205.1\|2594450_2595710_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|238874
NZ_CP016282.1\|WP_066596535.1\|2607151_2608066_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225088
NZ_CP016282.1\|WP_066599783.1\|2606574_2607051_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NZ_CP016282.1\|WP_066599778.1\|2599813_2600773_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|182464
NZ_CP016282.1\|WP_066596537.1\|2608062_2609313_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
NZ_CP016282.1\|WP_066596530.1\|2600814_2601834_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|182463
NZ_CP016282.1\|WP_066596525.1\|2598707_2599667_+\|iron-siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238566

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_084021055.1\|2597005_2597785_+\|hypothetical-protein	gnl\|CDD\|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	4.8424e-34
NZ_CP016282.1\|WP_066596542.1\|2612304_2612961_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	7.94843e-13
NZ_CP016282.1\|WP_066596531.1\|2602772_2603609_+\|class-II-glutamine-amidotransferase	gnl\|CDD\|238889	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like protein of unknown function found in prokaryotes, eukaryotes and archaea. YafJ has a conserved structural fold similar to those of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The YafJ fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.	1.97303e-75
NZ_CP016282.1\|WP_084021053.1\|2595905_2597039_+\|glycosyltransferase	gnl\|CDD\|340830	cd03800, GT4_sucrose_synthase, sucrose-phosphate synthase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.	1.31119e-88
NZ_CP016282.1\|WP_066596541.1\|2611867_2612305_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|281995	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase. This family of proteins is found in the genera Mycobacterium and Streptomyces. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. Rv1558 is an F420H(2)-dependent quinone reductase involved in oxidative stress protection.	1.09354e-52
NZ_CP016282.1\|WP_066596540.1\|2610565_2611840_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.85531e-30
NZ_CP016282.1\|WP_066596533.1\|2604591_2606406_+\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	5.34033e-14
NZ_CP016282.1\|WP_066596524.1\|2597784_2598633_+\|siderophore-interacting-protein	gnl\|CDD\|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	3.52389e-52
NZ_CP016282.1\|WP_066596545.1\|2614064_2615543_-\|GntP-family-transporter	gnl\|CDD\|182094	PRK09821, PRK09821, putative transporter; Provisional.	0
NZ_CP016282.1\|WP_066596547.1\|2615605_2616520_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	3.00971e-70
NZ_CP016282.1\|WP_066596543.1\|2612979_2613966_-\|class-II-fructose-bisphosphatase	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	2.87702e-175
NZ_CP016282.1\|WP_066596538.1\|2609417_2610524_-\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP016282.1\|WP_084021057.1\|2601830_2602706_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.80609e-127
NZ_CP016282.1\|WP_157109205.1\|2594450_2595710_-\|GAF-domain-containing-protein	gnl\|CDD\|238874	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	8.73962e-32
NZ_CP016282.1\|WP_066596535.1\|2607151_2608066_-\|ABC-transporter-permease	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	1.8595e-44
NZ_CP016282.1\|WP_066599783.1\|2606574_2607051_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	3.96236e-86
NZ_CP016282.1\|WP_066599778.1\|2599813_2600773_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	5.97668e-92
NZ_CP016282.1\|WP_066596537.1\|2608062_2609313_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	5.17302e-117
NZ_CP016282.1\|WP_066596530.1\|2600814_2601834_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|182463	PRK10440, PRK10440, iron-enterobactin ABC transporter permease.	3.52182e-94
NZ_CP016282.1\|WP_066596525.1\|2598707_2599667_+\|iron-siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238566	cd01146, FhuD, Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.	1.12929e-52

>NZ_CP016282.1|WP_066596533.1|2604591_2606406_+|HNH-endonuclease
MDEELVNGSTAPLGGTPTGSTPQDWNTSLAGPAPVPAAFDVAADSSVNAATDTPTDTRSGAGSTPDSGSGTDRADNTDGEPVRPAPARPARRGAPQPIWRDPADLPAVQRAHTGEFGEKLHLLSEAAAVVQEVMGSIDVDGLNDAELVALTQMTEKVGRPADLARVTTATVVDYRSRTGLGRDSLAWKLGASHHTDLLTRLTGASGQEMKRRVRLGEKIAPRMMGGTVLDPVFPTVAAALADGELGLDAAEEIVKGLADYKVHGRFDANPADVDAAEAGLVESATGSLYGRTGDDDPITRLGDSDGFAYPADALRDMALQWQAALNPDGLAPNEEVLEAKSTFSFGGIRNGLYPLRGGVTPELKGIIQTLFNTYQSARTAPRFPSAEEQERIEAGELVPGEILDERSGGEKRADILRGILTQVAQDPRTPTLGGMPPTVMVHVSAADLLAGIGVGWIDGVDAPLSMKTINQMVDNGGIRPVFFGGNGAVLALGNKARCFSPLQRREITARDGGCITPGCTCPPQWTEIHHVIPWEQGGRTDIDNGVLLCWYHHHTINTSGWKIRMVNGMPQVKAPHWIDPTGTWRRPNQHRAHDPNTRKPPNTE
>NZ_CP016282.1|WP_066596531.1|2602772_2603609_+|class-II-glutamine-amidotransferase
MCRWLAYIGEPLRPSTIVLDATHSIVAQSLDSPLGAETVNGDGFGFGWYASGAAATAEPALFHSIEPAWNDQNLRELTRAIESPLFFTHVRAAAGPPIQQTNCHPFRYENWMFMHNGAISGWRDLKRDLTLAIDPGLYPNVLGTTDSEVLFHLALTLGLQDDPIAAVGRAIRMVETVGHEHDVRFPWQGTVAVSDGSTLWAFRYSSQGRTRSLFHSTDIPTLREMYPDQARLAAFGDHARVVVSEPLNDLPGVFVEVPESTAVVLDADGYRHESFLGA
>NZ_CP016282.1|WP_084021057.1|2601830_2602706_+|ABC-transporter-ATP-binding-protein
MISPTGPHDSALDESPLEDSVLEDSVLAARGLAVRYDRRSVIDGLDLIVPPGSFTAIIGPNACGKSTLLRALAGLLPASSGSVLLDGRDIASYSAKDTARRLGLLPQGAVSPEGITVAELVARGRYAHQRLLRQWSVADEAAVTEALAETRVADLAKRPVDELSGGQRQRVWIAMVLAQQTPLILLDEPTTYLDIAHQIEILNLLHRLNAQGRTIVAVLHDLNHAARYASNIVAMQEGRVVANGVPQSTITADLVAEVFGLPNVVITDPVTGTPLVIPADTRVQHQPAGRA
>NZ_CP016282.1|WP_066596530.1|2600814_2601834_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MPRSPVTRMGPAIRTRSVLVGLSVAGVSVVLLLLALTLGDFPVTPAEVVGAVTGRLDGLPRIVVLEWRLPRAAAAVLFGAALAVAGAIFQTVTRNPLASPDIIGLANGSFTGMLVALLAFGGSWPLLTAGSLVGGLLAAVAIYLLAYRGGLHGFRFIVVGIGISAMLASVNTWMLLRAELETALFASAWGAGTLNSVTAATAVPAGICILVLLALLPPIVPAVRQLDLGDDSASATGVAVGRTRLTAIALAVCLVSVVTAVAGPIAFVALAAPQITRRLAGSPGIPFALSGLVGGALLLCSDLIAQHVIPLTVPVGVVTVVLGGGYLVWLLIHESRRRA
>NZ_CP016282.1|WP_066599778.1|2599813_2600773_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MVVLIAAVGLSIVVGANPVHPGTVLDTLFGGGTAESRFVIWDQRLPRTAAGLTVGAALGVAGALIQAFTRNPLADPGILGVNAGAAFFVAVGITFLGVTSPSGYVWLACAGALVLTIAVYVIGSAGGPAAGPVRLTVTGVAIGAVFAGLTTGLALTHPDTFDRMRGWSAGSLLERGLDVVLPVLPLVLVGLALALGAARGLNSIALGPDVARSQGVSVRRIQLVVLAAVTLLAGSATAVAGPLVFVGLVVPHVVRWTLGTDQRGIVLGSLLLGPSLVLLSDVLGRVAVLPSEMPVGIVTAFVGAPVLIALARRRSATAL
>NZ_CP016282.1|WP_066596525.1|2598707_2599667_+|iron-siderophore-ABC-transporter-substrate-binding-protein
MRPSRHPSRLLAALTLPVVVAIAVSGCSATASTGTGTGAAGATSTPDTGTHLVEHARGETEVPNDVQRVVVLEPVQLDTTVALGLIPVGAAVLNEAAGVPAYLGAAAAGIATVGTVPEPSIEKIAALKPDLILGTESRHSALYDQLSSIAPTVFMASQADPWTDNVALVARALGDEAGADDLLTAYTDRCAEIAETYGVAGMTAQFVRPRDGILTLYGPTSFAGSTLECAGFTIPERDWEGSISVDISPERVLDAQADLVLVSATDVTDPTLVPESIRTNAASFPGLNVVDQSFWITGVGPLGGMTVLDDIERILAGTK
>NZ_CP016282.1|WP_066596524.1|2597784_2598633_+|siderophore-interacting-protein
MPALFQSSPNALFDTEVRQVSRLSPGFLRVTLTGAHLHRFAAHGLDQRIKILVPSGAYPATFDEDLLHESEWRRRWRDLPATDRPALRSYTTSAVRPDLREIDLDFYVHARPGPASGWAVGAGVGQRLLVSGPSSRLSDRRHGIQWSPGMATHLLLAGDETAFPAIRGIVSALHPTSRATVILEAGDPRDAAWLTAEIQGHTVTVLRREPAGGEPTLLRAVEAWSGRSGATAAAMGDDFYAWLATESSQVSQLRTVLHAAGIAPDRVHSQGYWNDRARTTLD
>NZ_CP016282.1|WP_084021055.1|2597005_2597785_+|hypothetical-protein
MRPAAGPGLRVSLLDGRRSVLFVHAHPDDETISTGALIAEYVARGSRVFLLTCSRGERGEVVAGPLTALAGTNELARERDRELERATGILGITERFWLGEAPARVDGLEARRYRDSGMVWLRPGLAGPADDAASDALSVAPLTEVAADIAALIVRLRPDLVISYDDGGGYGHPDHVRAHDATLAACEATGTSFAEVLEAPRADGEWFDLPGHLGVVTDALRAHASQLTVHGTEIVHSGGQREPIVTSTGLRLHPHTSPA
>NZ_CP016282.1|WP_084021053.1|2595905_2597039_+|glycosyltransferase
MNVVVRHQAEAMAALGHQVEILTRRSSPEMPTTRRLSPGVTLRYLDAGPLRSVPKGDHEGFIDEFRVRASSLGPWDVIHSHHWFSGMAMLPLARELGVPHVQSFHSIAADEATPLSAGERPESGGRMAGEAWLARESDLIVAISAAEADTVVQRLGGSMDRIVVVPPGVDGGMFHPLAAADGPVAGANALGYAVVAGRLQPLKGLDLAIEALAAVPSELRPELVIAGDASADYDGYIDELTRLAARHGIADQVRFVGPCNRVKLAGLMRGARVVLVPSHSETFGLVALEAAASGVPVIAQGTGGLREAVIDGDTGLLIESRDPQDWADALTAVLSDHTLARRLSQAARRRAEEFDWPRSAAHLLEVYCALLPVPVCA
>NZ_CP016282.1|WP_157109205.1|2594450_2595710_-|GAF-domain-containing-protein
MRELCRWAMVPVLRVWAASIERRFAGIPRPTDAPQAHSPGIDSDRILIVGGGSAVGWGVLSHSLALPGALARALTDRTGRGADVDVSAKSSMMVHSAAHHVDFANLWRYDAVVLTLGIGDAARLTSTRSWVTGLGRLIDRIQHSSSLGVEIFLAGIEPMSSAPVFKTTFGRWAGTQVLALNAASADFCAGRERVTFVPLPATPVSAAGRFRSASDYDLWADALAGSMAAPLDPRGRSTHALPPAEAQGRTPDQVEEGRHRALMSLNLLHTAPEARFDRIVELASRSLGTSAAAFTVLDGDRQWHKSVVGLGTTEIPRSSSFCTITVLEPAALIVPDALLDDRFRDNPLVVGGPRLRFYAGFPIEAPSGERIGALCVYDQEPRTEEAVDVVLLRELALLLQNELWQTAAASGDEPIGQGA
>NZ_CP016282.1|WP_066599783.1|2606574_2607051_-|SsrA-binding-protein-SmpB
MPREKGEKVVATNRKARHDYLIEDTYEAGMVLSGTEVKSLRAGRASLVDGYAFIESGEAWLDAVHIPEYTAGTWTNHPPRRKRKLLLHKQEIIKISHKTKEGGYTLIPLKIYFSDGKAKVEIAVAKGKKEFDKRQTLRERQDKRESDRAISARRNLGD
>NZ_CP016282.1|WP_066596535.1|2607151_2608066_-|ABC-transporter-permease
MRLGLVLSEASHGLRRNASMVVSVVLVTFISLTFVGAAILMQMQIGQMKNFWYDRAQVGIYMCTAISPGETCTAGEATQEQIDSVKAQLESPTLATFIDKYYFETHEQAFENFKTQFAGNPVADYVTPEQLNQTFWVNLKNPEDSDVLVESLSGVAGVENVADQRKYLDQIFSVLNVASYTAIGIASLMLVAAALLIATTIRLSAFSRRKELGIMRLVGASNRFIQTPFILEGVFAALLGSLLAGGAVVALVKFFVQDFLGARLSGFALVDLQDALTVVPILLVLGAALAAASANFAITRYLKV
>NZ_CP016282.1|WP_066596537.1|2608062_2609313_-|cell-division-ATP-binding-protein-FtsE
MIRFDHITKKYPGTNRPALNSIDVEILRGEFVFLVGASGSGKSSCLRLMLKEEKPSSGSIHVLGQDLRSISNRKVPYFRRNLGVVFQDFRLLPNKSVYDNVAFSLQVIGKSRGYIQEAVPDTLQMVGLAEKAQRLPHELSGGEQQRVAIARAIVNKPQIVLADEPTGNLDPTTSAEIMSLLARINAGGTTVIMATHEAGIVDKMKRRVIELSAGQIVRDERQGGYATAAIPMVLPPGERAPSRSSRMPSTGAATGATTGPSTGPTPAAPLTYPAPEVLPQEVASAEVEAAAVAVNTAPPAEESEVATTASVPERHAEPAAAQPVAVEREAAQPVAAQQAPVVEYAQPVVEYAPPAEAEPAEPAANVEPPASTMSRPVIPVTQHDEPEQLTLAEKLGLRAPGEKPDPTIEQNVGPTR
>NZ_CP016282.1|WP_066596538.1|2609417_2610524_-|peptide-chain-release-factor-2
MIELDFSEQIAALRATFDDIRSVIDIDRLRLDIAELNDEAGAPDLWNDSEHAQKVTSDLSHRQSELKRIESIESRLDDLEVLVELANAEGDQESADEATAELESVKKVLGDLEVQTLLNGEFDPNPAVITIRAGAGGVDAADFAEMLLRMYLRWAEQHNYTTNVLDVSYAEEAGIKSATFEVNAPYAFGTLSVEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIEQAEAVEIPDNDIRVDVFRSSGPGGQSVNTTDSAVRITHLPTGLVVSCQNEKSQIQNRAAAMRVLASRLLLLQREQEAATKKEFAGIITASWGDQMRSYVLAPYQMVKDLRTEYEVNNPSNVFDGDLDGFIAAGIRWRKTPTE
>NZ_CP016282.1|WP_066596540.1|2610565_2611840_+|MFS-transporter
MSTERPFSLRGVALAAFLPTMLFSIGEGAMIPLIPLVADSLGASLAFAGFIAAMVMVGELAGDIPSGAVVSRFGERNSMIGASLLAIMAVLVCIIAPNPLVLAAGIFLIGLATAVFALARHAFMTSYVPVAYRARALSTLGGVFRAGWFVGPFIAAGVIQLTGSTTAVFWVFIVCCLAAAVVLLLLPDPSSTFASAAPGAPAGTAVRTAGEDEAAAETTGLFATIWRYRGVLLRLGTGAGLVGAMRATRTVMLPLWAVSIGINEPDTALIIGIAGGIDFALFYASGQIMDRFGRMWTAIPSMIGLGIGMLALSFTHDLPDNVQWFIAVAMFLSLANGIGSGLLMTLGADLAPPTGPAPFLGAWRFTADFGSAAAPLAVAGMTAVLSLSVASGVMGVVGLLGAGVLWRYIPRYAPRHPRVPLRDT
>NZ_CP016282.1|WP_066596541.1|2611867_2612305_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MPLHGDYEPSPEKWVRDQVELYESSGGTQGTTLRGMPVIVLTTLGAKSGKIRKAPLMRVEHDGRYAAVASLGGSPKNPVWYANVVAHPLVEVQDGPVRQDMRAREITGEEKDLWWERAVAAYPPYADYQSKTDRVIPVFLLEPVS
>NZ_CP016282.1|WP_066596542.1|2612304_2612961_+|pentapeptide-repeat-containing-protein
MARVTKRGPQLDRIVLENLLDNDGALVGRGDDRAAERYTRVDFSGRDFTGTGFTECELHAVDLNTTVLRGTSWAECVATELHAAVFSAPRSSWRDVRIEHSRLGSVEMYEANLRSVQIDGSKLDFVNLRNATLTDVLISNCIIDELDISSAVVQRLELRDCRIGTLDVAGARLTDVDLRSSDFSAIHSLEGLKGATIDDAQLSLLAPLLAAHLGILVD
>NZ_CP016282.1|WP_066596543.1|2612979_2613966_-|class-II-fructose-bisphosphatase
MVNTEHASLYLHPDRNLGMELVRATEAAAIRAVPFIGRGDKNAADGAAVDAMRKFLGTVDFDGVVVIGEGEKDDAPMLYNGEHVGSGRGPSCDIAVDPIDGTSLTANGRQNALSMIAVADRGSMYDPSAVFYMDKIVTGWEGHGVVDLRQPIGENIRALAKAKGKDVADMTIAILDRPRHAGLIDEVRAAGAGTRLMLDGDVAGGINAALSETRIDMCVGIGGTPEGIITACALKALGGFIQARLHPKDDDEAQKAIDAGHDLDRILGVDDLVTSDNTYFVATGVTDGQLVGGVRKMGPKIRTESIVLRGKSGTIRRVVAEHLAEKWL
>NZ_CP016282.1|WP_066596545.1|2614064_2615543_-|GntP-family-transporter
MNTAILLGIAAGGIALLLVLIIRFKVQAFVALLLVSLLVALAAGIPLTTIPATEDTPERLGVIQTIVAGMGGTLGTVAILVALGAMLGRLIEVSGGAASLAGRFTTLLGPKRVSAALTAAALVLAIPVFFDVGFIILVPIIYGFCKVAGVNPVKFGLPVAGIMLAVHVAVPPHPGIVGGSALLGTDLGWVTIIGLGVAVPLGFLAHFVSKLLNRREFTMLPATAVQFAQFGTDSTDNTGGADSSTGGGSSAGSTRTGTLTKTEAPPTAGTILTLILVPLVLIMSGTLAATLLPAGDPLRPLFAFIGAPIFALLVALLLAFYLLTVRRGWSLAHTGDVLEAALPPAAIVILVTGAGGAFAKVLTESGIGTALSDALTATGLPILVLAFLISLVLRVSQGSATVAILSTAGLIAENVAASDYSVIQVALITLSVAFGALGLSHVNDSGFWVVTRYLGLSVADGLRTWTVLTTVLGVAGFLIVSLLWLVVGLGAA
>NZ_CP016282.1|WP_066596547.1|2615605_2616520_-|NAD(P)-dependent-oxidoreductase
MNQPQSSSPTYTVAVLGLGAMGLPMATRLASKLTVHGFDINGARLELAAAAGIVVFDSAQGAAAGADAVLLAVRNGDQLREVLFGHNGISEVLRPGAVVIMTSTVGIEDVTAVAARLAEHGVQLVDAPLSGGPVRAGQGDLLIVVGAEPAARATAQPVLDLLASTLSVIGDKPGDGQAFKTVNQLLCGVHIAVAAEALALAGALGLDVESTLATLSSGAAGSFMLANRGPRMLEAYTEDGAEVLSRLDIFVKDMGIVTTAARGLGLATPVASAAEQVYLIGQAAGLAAADDSAVIKVVAPQATA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_7

2841284-2841407

Orphan

Consensus_repeat	Method
GCGCGCCGCCCGCGCATCGGCGCCGCACCCGCGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016282_7

>merge|NZ_CP016282|7|2841284-2841407|CRISPRCasFinder
GCGCGCCGCCCGCGCATCGGCGCCGCACCCGCGCAACGGCGCCGCACCCGCACCCGGCGATTCGCGGGTCAAACGCCGCTGCGCGCCCTGCGCGCCGCCCGCGCCTCGGCGCCGCACCCGCGCA

>NZ_CP016282|7|7|2841284-2841407|CRISPRCasFinder
GCGCGCCGCCCGCGCATCGGCGCCGCACCCGCGCA	ACGGCGCCGCACCCGCACCCGGCGATTCGCGGGTCAAACGCCGCTGCGCGCCCT
GCGCGCCGCCCGCGCCTCGGCGCCGCACCCGCGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_066596923.1\|2850959_2851247_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066596907.1\|2845049_2846309_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP016282.1\|WP_066596901.1\|2839200_2840466_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238624
NZ_CP016282.1\|WP_066596917.1\|2850699_2850906_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_084021120.1\|2831172_2831877_-\|DUF1989-domain-containing-protein	unknown	unknown	gnl\|CDD\|132465
NZ_CP016282.1\|WP_066596899.1\|2837334_2838951_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173877
NZ_CP016282.1\|WP_066596925.1\|2852240_2852729_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|310261
NZ_CP016282.1\|WP_066596889.1\|2829319_2831176_-\|allophanate-hydrolase	unknown	unknown	gnl\|CDD\|236177
NZ_CP016282.1\|WP_066596897.1\|2835495_2837256_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_CP016282.1\|WP_066596903.1\|2841608_2842328_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP016282.1\|WP_066596916.1\|2848377_2850456_+\|amylo-alpha-1,6-glucosidase	unknown	unknown	gnl\|CDD\|225942
NZ_CP016282.1\|WP_084021423.1\|2831876_2832635_-\|DUF1989-domain-containing-protein	unknown	unknown	gnl\|CDD\|163257
NZ_CP016282.1\|WP_084021122.1\|2840462_2841203_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP016282.1\|WP_066596891.1\|2833566_2834565_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP016282.1\|WP_066596905.1\|2842416_2843280_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187578
NZ_CP016282.1\|WP_066596893.1\|2834617_2835499_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP016282.1\|WP_066596913.1\|2846314_2847409_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP016282.1\|WP_066599885.1\|2832757_2833414_-\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238245
NZ_CP016282.1\|WP_066596906.1\|2843777_2844833_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP016282.1\|WP_066596915.1\|2847405_2848314_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_066596907.1\|2845049_2846309_+\|extracellular-solute-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.39596e-67
NZ_CP016282.1\|WP_066596901.1\|2839200_2840466_+\|amidohydrolase-family-protein	gnl\|CDD\|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	1.31333e-100
NZ_CP016282.1\|WP_084021120.1\|2831172_2831877_-\|DUF1989-domain-containing-protein	gnl\|CDD\|132465	TIGR03424, urea_degr_1, urea carboxylase-associated protein 1. A number of bacteria degrade urea as a nitrogen source by the urea carboxylase/allophanate hydrolase pathway, which uses biotin and consumes ATP, rather than my means of the nickel-dependent enzyme urease. This model represents one of a pair of homologous, tandem uncharacterized genes found together with the urea carboxylase and allophanate hydrolase genes.	3.08493e-129
NZ_CP016282.1\|WP_066596899.1\|2837334_2838951_-\|hypothetical-protein	gnl\|CDD\|173877	cd08512, PBP2_NikA_DppA_OppA_like_7, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.27165e-80
NZ_CP016282.1\|WP_066596925.1\|2852240_2852729_+\|histidine-kinase	gnl\|CDD\|310261	pfam05534, HicB, HicB family. This family consists of several bacterial HicB related proteins. The function of HicB is unknown although it is thought to be involved in pilus formation. It has been speculated that HicB performs a function antagonistic to that of pili and yet is necessary for invasion of certain niches.	0.00625084
NZ_CP016282.1\|WP_066596889.1\|2829319_2831176_-\|allophanate-hydrolase	gnl\|CDD\|236177	PRK08186, PRK08186, allophanate hydrolase; Provisional.	0
NZ_CP016282.1\|WP_066596897.1\|2835495_2837256_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_CP016282.1\|WP_066596903.1\|2841608_2842328_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.52448e-09
NZ_CP016282.1\|WP_066596916.1\|2848377_2850456_+\|amylo-alpha-1,6-glucosidase	gnl\|CDD\|225942	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism].	1.74756e-75
NZ_CP016282.1\|WP_084021423.1\|2831876_2832635_-\|DUF1989-domain-containing-protein	gnl\|CDD\|163257	TIGR03425, urea_degr_2, urea carboxylase-associated protein 2. A number of bacteria degrade urea as a nitrogen source by the urea carboxylase/allophanate hydrolase pathway, which uses biotin and consumes ATP, rather than my means of the nickel-dependent enzyme urease. This model represents one of a pair of homologous, tandem uncharacterized genes found together with the urea carboxylase and allophanate hydrolase genes.	1.67179e-95
NZ_CP016282.1\|WP_084021122.1\|2840462_2841203_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.22086e-10
NZ_CP016282.1\|WP_066596891.1\|2833566_2834565_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.33628e-80
NZ_CP016282.1\|WP_066596905.1\|2842416_2843280_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.36768e-69
NZ_CP016282.1\|WP_066596893.1\|2834617_2835499_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.50305e-74
NZ_CP016282.1\|WP_066596913.1\|2846314_2847409_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.89509e-77
NZ_CP016282.1\|WP_066599885.1\|2832757_2833414_-\|cysteine-hydrolase	gnl\|CDD\|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	5.8057e-43
NZ_CP016282.1\|WP_066596906.1\|2843777_2844833_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	6.15436e-70
NZ_CP016282.1\|WP_066596915.1\|2847405_2848314_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.21438e-76

>NZ_CP016282.1|WP_084021122.1|2840462_2841203_+|TetR/AcrR-family-transcriptional-regulator
MTSTPDTDASGTSGTAATSPTDAPTTPKRTAGRPRAEGKQRAGLSTRDEILEAAATLFTDQGYTDTTTRQIASVVGIRQASLYYHFADKGSILSALLTGTVEPAVHFAEWLDTQPLDAPTKLYALAKYDLDVILQDRWNLHVLYRLPDAKAERGDTMQAALQEHYLRFATAAAAAGTDPQAVTDDLHLVFGLVESILVQRDWGGGAARHAYADSIARGCLRLVRVPETAFPTIFDIAQRAIATYPA
>NZ_CP016282.1|WP_066596901.1|2839200_2840466_+|amidohydrolase-family-protein
MTPSLLLRNVTVIDGLGGAPRPAHDVLITDGLFTSISPTGSLPLPQVVNPDALTVLDGTGHTALPGFFDCHVHVSTSPATDTLTSITEPESAKTLRAVPALRATLDAGVTSARDLAGADSGFRDAIADGVIAGPALQLAIRILSVSGGHGDWRTVGGTPLDTGPGAGVVGDSPADFVRLTREVIREGADWIKVAATGGMGSPRSNPEGGGLSEAELRAVVEEAARHGHIGVAAHSIGTAGIAAAVRAGVRSIEHGYLIDDATIELMGEQGTFLVPTLSTLTRPASPTAAPWTVAKRRRTVQNARERVGAAIRAGVNVALGTDAGIVEHGTNLRELALLVEFGLTPMQAILAGTSSAARMSGILDEVGTIEPGKRADLVATLVDPLAQIAALADPGAMRLIVQSGRIHSSTFPLESTEPQSA
>NZ_CP016282.1|WP_066596899.1|2837334_2838951_-|hypothetical-protein
MSPTPFSRPARSAFSRPRKAALLTGLAAVTALALAGCSSSAATDSFGSSASDSLTVVITQTYTTPPDPDTNYDGPGLNIIESTYEGLVAYQDGSDTAEIVPELATDWTLSDDGLTYTFTLREGVTFHDGTEFNADAVVASFERRTAVDGGPAYMVGDVTAVTPVDDYTVDVTLAAPNSAFVDYLASPFGLKMVSPTVLTEEAGDDFAQTYLTTHDAGTGPYELSDVETGVSYTLTAADDYWGDAPEFGTVNIEISDNASAAQLRLERGEIDAILGNLNKTTFASLASNDKLDASTFPNFTTQMVYVNPASAIFTTVEDRTALFSGLDTKTIIDSSMGELEVPTSQLFPAGMLDAAADDQGVTYDPAALQGIVDSGIAAGKTIRIGYPASSSDAAAVAQEMGATLSSAGLPAEAVSLGSGSVYSLTDDLAAAPDLVIMAAFPDAGHVDAWARIIYTPTGGLDVLGAEVPGLNDDLDAALATEGNDAYAAIAQKIIAAKYWFSIGSLQTTTIARTGLTGLDDARNLLEYNVLHFAALGNE
>NZ_CP016282.1|WP_066596897.1|2835495_2837256_-|ABC-transporter-ATP-binding-protein
MTFPTAQSGATQPGAGPDASAPVARVRDLRITLHREGAAIEAVRGVSFDVMPGEILGLVGESGSGKSVLGLSMMGLLPDYAKPKVTGSIQIQGTDIVGTTAEADRLVRKEHIGAVFQDPMTSLDPTMTIGHQLAEVARDKAHVLTLLADVGIPDPATRLGAYPHQLSGGLRQRVMIALALARNPSLIIADEPTTALDVTVQAQILDLLLTLRDEHGCSVIFVTHDLGVAAQISDRIAVMYRGEIVESGTVTSVLGTPQHDYTKGLLASRIDLNTPTDRPIVSAHGAGAADHLPARWPDVSPGGPAVTITDVRRSFVSGPLWKRRSLDAVRGVSLTIAQGESVALVGESGCGKSTLLRMVAGLDTPTSGTVSVAGTTRPQMVFQDAGSSLTPWLSVGELLRERLTATTPGLTRTQVRDRIEEALERVGLPADVARVRGDSLSGGQRQRVAIARAVIVPPAVLLCDEPTSALDVSLAATVLNLLGRLRRELNMSLLFVTHDLAAARVISDRIAVMNRGEIVELGAAAEVCANPIKPYTRSLLAAIPGQHLRVAPQRPPTSTIPTVAGNTLDTFDIDLDLDLDLGEARA
>NZ_CP016282.1|WP_066596893.1|2834617_2835499_-|ABC-transporter-permease
MSVFAPTPTVARPGRGARKFQRVTALRHRSTVVNLIGLTGLVLLVLLALLAPVLAPYSPILRAGAPFQPPLSPGFLLGTDALGYDIFSRLLFGLRASITAAAIVIASGVIIGGLVGVVAGALGGWADGLLMRVTDLFLALPGILIAMVVAAALGASFTSSLIGVAVVWWPMYARLVRGEVRSWAARPHLEAATLAGVGWSRRVARHLLPGVTSTVVIAASLDVGGLVVAMSGLSFIGLSSPAPAPELGAMAAQGMQYLLQFWWVPVVPGLAVMLLALCANLAGDGIRDLLARR
>NZ_CP016282.1|WP_066596891.1|2833566_2834565_-|ABC-transporter-permease
MLMFILKRIVAMAGVLLALTVALFTLQELSGVDPAKAYVGANASAEALERARERLGLDQSAVVRYFDYLGGLLHGDLQNSLRTRTPVAEGLATAFPATLELALWTLGFALILGAFFALLTVVRWKGAAVVRFVLLSGAAAPTFLLAMVGLLVFYGSLGLIPAGGRSSFSGGSSSPTGLLVLDALLAGRMDVAGDAVWHLLLPATCAAISPAVAIGRVLVDGLKVNLGSDHARTARSAGMKESAVLVRHALRNSLGATLSMIGIQTGLLLGGLVVVEKITAWPGLGSYLEKSVNVSDFPGIAGVALLLGITYVLLNTIVDVLQVVADRRISLT
>NZ_CP016282.1|WP_066599885.1|2832757_2833414_-|cysteine-hydrolase
MTAAETLDIVGNTVLIVVDIQGGEIPREDSRTEIPYMGGRTERAPRVREVIRHCREKGIPVVFIQEVHKPSLVDIGRELDGSEGPHCLEGWEETELAPGIDPRPEEFLIKKRRYSAFFGTELEIVLKGYKAETLLLVGGLTDVCVHYTAVDAHQHDYRFRVLTDCVGGSTQQAHDNALQAMHYLQRDALVTAAQTNEWLATLPTPKPVSPVHELVRNA
>NZ_CP016282.1|WP_084021423.1|2831876_2832635_-|DUF1989-domain-containing-protein
MPTVPAATAGGWPAGLAENDRFVAETVAGGNYTTLAVQRGTIVEFTDLDGDACAHLAIFNQAQLDERLNVADTVKIQWQAYLGEGAMLLSDRGRVLATIVSDNSGTHDTFAGTSTRAVNETRYGDGSAHGGTPAGRELLILGAAKHGLTPRDLPPTVALFQGVRVAEDGALVFTGSTGPGAAVRLRFELPAVLLVANVPSPVDPRPEYTSTPVRIRAWRGEAATLESPEATATPEAARAFVNTIDYARTRGL
>NZ_CP016282.1|WP_084021120.1|2831172_2831877_-|DUF1989-domain-containing-protein
MGRTDTQTSSDSSTGPAADPTPNAVPERLSGREIVLDEVVGRRGPWSHVVAAGDELTIVDLEGNQAVDFLLYDAADTAVRYSAPDTISAQGNVYLSQGSVLRANTGDALMTLVHDEVGRHDTIGGACSKESNSLRYGHHTVHQHACVENFLAEGARWGLGKRDLVSNINFYMNVPVEADGALGIVDGLSAPGLSLTLRAERDVLVLVSNCPQINNPCNGFNPTPVRMLVTRTAR
>NZ_CP016282.1|WP_066596889.1|2829319_2831176_-|allophanate-hydrolase
MTPADLASPGTPPAARVAEVYAAIAAADRPEVWITLRAEAEVQAEVDEVLARAAIAREPLPLAGLLFAVKDNIDVAGLPTTAACPGFAYPAEEDATAVARLRAAGAVVLGKTNLDQFATGLVGTRSPYGAVRSARRPDRISGGSSSGSAVAVALGLVDFALGTDTAGSGRVPAALQGLVGVKGTVGLVPTTGVVPACRSLDCVTAFARDLHTAESVLRVMAGPDGRDALAALPHASAPLAAPADPVIAVPRAADLTALAPLWRSAFDAHLGRLRDAGVTLVEIDISPFLEAAALLYNGAFVAERYAAVGAAIDAAPAGLDPVVAGIVTAAGQLPAHRYAADLVRLAELKLAGERAFAGADAMLLPTTTHHPTLAEVAAEPIAVNSRLGTFTNFANLFGYPAYAVPIDAGAPDENVGVQVLARPFADAVARDVAALLLRVESRALSSRERSNGHLRAPEAATSPLPRDVVSREDVGERRMAGHHVRSDLAAGVHLLVVGAHLSGLPLHDRMRRHGALFAGDVRTAPGYTLVALGDPLNRPGMIRTPYSDSSVLGELWRVPETALSALLLEAAAPLGLGRVTLSDGREVVGYLCEATAATGKPVVADGDWRAHVGGAVRA
>NZ_CP016282.1|WP_066596903.1|2841608_2842328_-|TetR/AcrR-family-transcriptional-regulator
MTELAAASVSDDQRTRIVEVAARLLRERGAGGLTTRGVADAADVQPPAIYRLFGDKDGLIEAVAEHVLAEHVAAKSTVGDSGDPVAALRSGWQLQIDFGLANPDLGALLTAPGRARRSPAIEAGIEVLRARVRALAEAGLLRVSQRRAVDLIHAAGAGAVLALQEAAPEERDPGLSEALLDAVLQQILEPDADGIQGDISSTAIAVTFAAHIPTLLALTPAERSLLTEWVGRSIDAAEH
>NZ_CP016282.1|WP_066596905.1|2842416_2843280_+|NAD-dependent-epimerase/dehydratase-family-protein
MIIVTGATGHLGTQIVESVLERVPAASVGVSVRDPAKARGLSDRGVRVRAGDFTDPGSLAHAFEDADQVLVISAAIRGGGAFDANRVAIDAAKAAGAGRVLYTSHQAASPDSLFPPQLVHAATEAHLAGQSVPFTALRNGFYANALGIHLDSALSTGRIVVPEDGPVSWTAHEDLAEVAAIALTDDGTLDGISAPLTASVALDLGQVAGILSTLTGQTITRVTVSDDEWRASAIERGLPPMVADFSLGMFQAARRGEFAVTDSTLETLIGHATTPVEHTLRQLLADR
>NZ_CP016282.1|WP_066596906.1|2843777_2844833_-|LacI-family-DNA-binding-transcriptional-regulator
MTTFPTVTDVALAAGVSRQTVSNVMNSPGIVRADTRERVQAAIAELGYRPHASARRLRTRRSSTIGIRLDPMIDGISGSVLDSFLHALTEQADRQGLRVLLFTATGPEDEITQLKRLNDGADVDGFVLTSTFAGDPRTTWLLENGISFVTFGRPWGVDDLDDPKHLWVDVDGWTGLHDATRAQQEAGARRIGYIGWPSPSGTGEDRRRGWRDAMLERNDVTEDELAALEVVTVDGVAEGTAAMQELRRTAGRLDAVLCASDSLALGAMIANPERVPVTGYDNTPVAAAIGLSSVDQSVDEVAAGVLELLTGEFGGKVHGAPESAEPRHRMVKPRLVVREFAAIPMEAPAPA
>NZ_CP016282.1|WP_066596907.1|2845049_2846309_+|extracellular-solute-binding-protein
MQRRNSRWLIGAGLTVVGALTLSACGSGSGFGDSAGSTDGELTSDSSKGLTVLIGSSGDAETAAVNEAVAAWSKDSGTDAKVSVASDLNQQLAQGFAAQKPADVFYLSTDALAGYASNGSLLPYGDDLANKDDFYPSLVSSFTYDGEFYCAPKDFSTLQLIINTDLWAAAGLTDADIPTTWDELATVAKTLTTDTQVGLGIGGEYARLGAFMTEAGGNLMNDDSTEATANSPESVEGLEYAQTLLNDGVMKYATELGAGWGGEAFGKQLSAMTIEGNWITGAMTNDFPDVNYTVAELPAGPEGKGTLQFTNCWGIAADSPNQAAALDLVEQLTSKDAQLTFSEEFGPMPSIQSAAEDWKSANPTLVPFLAGADYAKGVPNLQGSADVVSDLNAQLESLKTGDAQTILDSTQKNLEALLK
>NZ_CP016282.1|WP_066596913.1|2846314_2847409_+|sugar-ABC-transporter-permease
MSTPTQTPRRSGIRGGEAASGWLFTAPMIILLGMFLVIPVLMALWVSFSDWNGRGSPFAGSVGFVGLDNYSALLGGGGLAEQDFGTALRNNAWYVLLVVPIQTMLSLFLAVLVNRQILRGRGFFRTAFYFPSVTSSVAITVLWLFLFSSTGAVNKLLSFIGVNGPNWFNDPSGVLHNILRVFGVQNGPAALTGNDFLGISFWEWLAGPSVAMSAFILMAVFTTSGTFMLLFIAALQNLSGDVVEAAMMDGANGWQRFWRVTLPQLRPTLFTVLTLGLIGAWQVFDQIYTGTQGGPGKTTLTPAYLSYQTAFTNQAWGQGAAIAFILFVIIVVFTLFQRALLAERKVSARRMRMYVQTPTPGGSK
>NZ_CP016282.1|WP_066596915.1|2847405_2848314_+|carbohydrate-ABC-transporter-permease
MSTTARARVQPRSPSQRLRNLSRPQLPTSAIAGRSLLYAILIVLAIIYIAPFLVQVATSFKTDAEAASNPMSLIPATWSSAAYEKLFLNSDFPVWFQNSAIVTVFVTLGRVFFNSLAGYALARLHFRGRNVIFALLIAVMSVPGVVLLIPKFLVINQLGIYDTYVAMIVPLLTDAAGVFIMKNFFESIPASVEEQARIDGAGTFRVFWSIVLPMARPALVTIIILSFQGSWNELSHFIVATQSPELTTLTKGVASLASGQLSQGTQYPLKLAAAAIMTIPVAVMFFIFQKRIMNTTDGAVKE
>NZ_CP016282.1|WP_066596916.1|2848377_2850456_+|amylo-alpha-1,6-glucosidase
MLSHPVQPLLHDSAIVLAAPTQAWSGSDGRTSLPIHGLYHADTRILSGWTLLVGGAAGEPIGSAARGAGEMTFNALLRHLDDRTADPRLRLHVTRTVTAGRLTEQITIESGLAEPVDTTVSVRLSADFADMQTVKAGLASAADRAAFPAAELPEIPSVEVQTSDAGIRLTTPTVAALVQVSGDGVLGTDAAALGRHSADPVGALGRPTELGANWAVTVPARGSVTVTWTVDIDHSATVVQAAPGLPEWAGVSVQSGDARLGRWVQKALEDLSGLRMATTARPEEPFLAAGAPWFFTLFGRDSIWAARFLLPLGTELAASTLRILAELQGTSTNDETAEQPGKIMHELRPAAFTIPGEDVSLPPLYYGTVDATPLWICLLADAHRWGMADAEVEALLPHLEAALAWMRDFGDSDGDGFLEYVDSTGHGLANQGWKDSGDSIQWRDGSLADGPIALCEVQAYAYQAAIGGADLLDAFGRPGGDVWRAWAEKLKTRFRESFWIDSPAGRYPAVALDAFKRPVDTVTSNIGHLLGTGLLSAEEAALVAARLVSPELNSGYGLRTMSTDSAGYWPVSYHGGSVWTHDTAIAIAGLGRDGFGAEAGELITGLLAAAESFDYRMPELHSGDDATAVTAAGPYPAACRPQAWAAAAAVAVLGTVLGLAPDPATGEVTSAPITPAVVGDVTVHGLPARCIR
>NZ_CP016282.1|WP_066596917.1|2850699_2850906_+|hypothetical-protein
MTALRLIVTAAIAFAAYFIGAKAGRGRYKQIRRNAKKAWNDPTVKKARARTHKLASRNAKKITKAVHR
>NZ_CP016282.1|WP_066596923.1|2850959_2851247_+|hypothetical-protein
MTDNTAQQAQHLAEDAADKATDLAEQARHAIDDTVSTVKSAVNDLDLDKTADTVIATAHETLDKITAAYKRNPALVLTIASVALAIVGTIVSRRR
>NZ_CP016282.1|WP_066596925.1|2852240_2852729_+|histidine-kinase
MELAPYVTDLQRQLLEAAETGSDDTRALAERLAAGLDAAARLVLLDVLSAAAGEITRDLAPGSVDLRLRGREVEFVVTAPTAEQEGDDGSAASVDLDDVSTSRTTLRLPDALKARVDEAALADGLSVNTWLVRAIAAAVQPKQRRSAQRTLRTGDNFAGWAR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_8

3597859-3597960

Orphan

Consensus_repeat	Method
GCTGAGGCAGCCATATGGCCGCTTTCGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016282_8

>merge|NZ_CP016282|8|3597859-3597960|CRISPRCasFinder
GCTGAGGCAGCCATATGGCCGCTTTCGCGAAAACGACAGTCCACGAGAGCGGCGAAACGGCGACCTCAGCCGGCTGAGGCAGCCATTTGGCCGCTTTCGCGA

>NZ_CP016282|8|8|3597859-3597960|CRISPRCasFinder
GCTGAGGCAGCCATATGGCCGCTTTCGCGA	AAACGACAGTCCACGAGAGCGGCGAAACGGCGACCTCAGCCG
GCTGAGGCAGCCATTTGGCCGCTTTCGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_066598113.1\|3588646_3589273_+\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|378252
NZ_CP016282.1\|WP_066598136.1\|3604498_3606856_+\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428
NZ_CP016282.1\|WP_066598122.1\|3597995_3598937_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235737
NZ_CP016282.1\|WP_066600189.1\|3603890_3604502_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP016282.1\|WP_084021449.1\|3592875_3595239_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_CP016282.1\|WP_066598132.1\|3600521_3601187_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP016282.1\|WP_066598110.1\|3587840_3588485_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284933
NZ_CP016282.1\|WP_084021242.1\|3591176_3591980_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP016282.1\|WP_066598124.1\|3598933_3599404_-\|chorismate-mutase	unknown	unknown	gnl\|CDD\|181719
NZ_CP016282.1\|WP_066598130.1\|3599487_3600375_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP016282.1\|WP_084021241.1\|3586941_3587526_+\|DUF3817-domain-containing-protein	unknown	unknown	gnl\|CDD\|378962
NZ_CP016282.1\|WP_084021243.1\|3596898_3597813_+\|DUF559-domain-containing-protein	unknown	unknown	gnl\|CDD\|225408
NZ_CP016282.1\|WP_084021244.1\|3602554_3603073_-\|DUF3151-domain-containing-protein	unknown	unknown	gnl\|CDD\|378646
NZ_CP016282.1\|WP_066598115.1\|3589281_3591180_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP016282.1\|WP_167550860.1\|3603181_3603754_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP016282.1\|WP_066598137.1\|3606989_3608033_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176459
NZ_CP016282.1\|WP_066598118.1\|3595317_3596526_-\|L-2-hydroxyglutarate-oxidase	unknown	unknown	gnl\|CDD\|183292
NZ_CP016282.1\|WP_066598134.1\|3601264_3602551_-\|adenylosuccinate-synthase	unknown	unknown	gnl\|CDD\|234904
NZ_CP016282.1\|WP_066598106.1\|3585909_3586935_-\|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl\|CDD\|381376
NZ_CP016282.1\|WP_066600187.1\|3592022_3592661_-\|DUF1211-domain-containing-protein	unknown	unknown	gnl\|CDD\|377696

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_066598113.1\|3588646_3589273_+\|ECF-transporter-S-component	gnl\|CDD\|378252	pfam09819, ABC_cobalt, ABC-type cobalt transport system, permease component. Members of this family of prokaryotic proteins include various hypothetical proteins as well as ABC-type cobalt transport systems.	5.42425e-24
NZ_CP016282.1\|WP_066598136.1\|3604498_3606856_+\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	1.24462e-85
NZ_CP016282.1\|WP_066598122.1\|3597995_3598937_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235737	PRK06197, PRK06197, short chain dehydrogenase; Provisional.	6.55721e-79
NZ_CP016282.1\|WP_066600189.1\|3603890_3604502_+\|hypothetical-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	0.0052655
NZ_CP016282.1\|WP_084021449.1\|3592875_3595239_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_CP016282.1\|WP_066598132.1\|3600521_3601187_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.5112e-16
NZ_CP016282.1\|WP_066598110.1\|3587840_3588485_+\|hypothetical-protein	gnl\|CDD\|284933	pfam07615, Ykof, YKOF-related Family.	1.81759e-14
NZ_CP016282.1\|WP_084021242.1\|3591176_3591980_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	3.14732e-23
NZ_CP016282.1\|WP_066598124.1\|3598933_3599404_-\|chorismate-mutase	gnl\|CDD\|181719	PRK09239, PRK09239, chorismate mutase; Provisional.	9.66713e-54
NZ_CP016282.1\|WP_066598130.1\|3599487_3600375_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.77675e-14
NZ_CP016282.1\|WP_084021241.1\|3586941_3587526_+\|DUF3817-domain-containing-protein	gnl\|CDD\|378962	pfam12823, DUF3817, Domain of unknown function (DUF3817). This domain is of unknown function. It is sometimes found adjacent to pfam07690 and pfam03176 which are both transporter domains.	7.55797e-19
NZ_CP016282.1\|WP_084021243.1\|3596898_3597813_+\|DUF559-domain-containing-protein	gnl\|CDD\|225408	COG2852, COG2852, Very-short-patch-repair endonuclease [Replication, recombination, and repair].	0.000608144
NZ_CP016282.1\|WP_084021244.1\|3602554_3603073_-\|DUF3151-domain-containing-protein	gnl\|CDD\|378646	pfam11349, DUF3151, Protein of unknown function (DUF3151). This family of proteins with unknown function appears to be restricted to Actinobacteria.	9.59769e-56
NZ_CP016282.1\|WP_066598115.1\|3589281_3591180_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	2.43669e-62
NZ_CP016282.1\|WP_167550860.1\|3603181_3603754_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.17719e-13
NZ_CP016282.1\|WP_066598137.1\|3606989_3608033_+\|hypothetical-protein	gnl\|CDD\|176459	cd03586, PolY_Pol_IV_kappa, DNA Polymerase IV/Kappa. Pol IV, also known as Pol kappa, DinB, and Dpo4, is a translesion synthesis (TLS) polymerase. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Known primarily as Pol IV in prokaryotes and Pol kappa in eukaryotes, this polymerase has a propensity for generating frameshift mutations. The eukaryotic Pol kappa differs from Pol IV and Dpo4 by an N-terminal extension of ~75 residues known as the "N-clasp" region. The structure of Pol kappa shows DNA that is almost totally encircled by Pol kappa, with the N-clasp region augmenting the interactions between DNA and the polymerase. Pol kappa is more resistant than Pol eta and Pol iota to bulky guanine adducts and is efficient at catalyzing the incorporation of dCTP. Bacterial pol IV has a higher error rate than other Y-family polymerases.	1.6837e-71
NZ_CP016282.1\|WP_066598118.1\|3595317_3596526_-\|L-2-hydroxyglutarate-oxidase	gnl\|CDD\|183292	PRK11728, PRK11728, L-2-hydroxyglutarate oxidase.	0
NZ_CP016282.1\|WP_066598134.1\|3601264_3602551_-\|adenylosuccinate-synthase	gnl\|CDD\|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
NZ_CP016282.1\|WP_066598106.1\|3585909_3586935_-\|L-glyceraldehyde-3-phosphate-reductase	gnl\|CDD\|381376	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.	0
NZ_CP016282.1\|WP_066600187.1\|3592022_3592661_-\|DUF1211-domain-containing-protein	gnl\|CDD\|377696	pfam06736, DUF1211, Protein of unknown function (DUF1211). This family represents a conserved region within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. These may possibly be integral membrane proteins.	5.63031e-31

>NZ_CP016282.1|WP_084021243.1|3596898_3597813_+|DUF559-domain-containing-protein
MKRRTEIPRALQGRAFSHQEGLSEGMTRARMRGDDLARPYHGIRVVPSDSTDPLARIRSYLPHLSGEQFFSHTSAALIHNMPLPLRLAQDPRVHVSTHIASSRHAGRGVVGHQVQRDRVRVVVVTGMQVTSPVDTWCQLSTMLSLDALIEAGDALVRRKRPLATMDELRAGVLRYTGQRGAKKLREAFESVRPRTDSAKETATRLVIVRAGLPEPEVNGEIFDRLGRKIATGDLVFRKYKVLVEYDGEQHRTDEEQYHWDVDRLDAIMEAGWRVIRINKSHLRMSPSPALRKITTALAAAGWSP
>NZ_CP016282.1|WP_066598118.1|3595317_3596526_-|L-2-hydroxyglutarate-oxidase
MGERIAIIGGGIVGVALARALALRGLGGVTVFEKEDRLAAHQTGRNSGVVHAGLYYQPGSLKARLCAAGRTSIRDYCAEKNLPYREVGKLVVAVDESELPALAEIERRAHANGVPGLIRLDGGARLREIEPHVAGVAAVHSPQTAAVDYGAITEAMATDVRSNGGSILTGHEVVALQLEGATVRVRTRESEHVVDRVIACAGLQSDVVARLVGADPSPKILPFRGEYWALDPARTDLVRGMIYPVPDPRFPFLGVHFTRGVYDDVHVGPNAVPALAREGYTWLTVSPRDTWESLRWPGAGALARQHWRMGLDEISGSLVKPLYYRKARRFIPELRMSDLTSKTAAGVRAQAWGRDGTLLDDFAVDQVGPVTLLRNAPSPAATSSMAIAEHVLENYVLARTRD
>NZ_CP016282.1|WP_084021449.1|3592875_3595239_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MRRVDLPGQASAISGRTPLVTAVSNTSSRGVADTVTNAINTPEKEQPYAALGLTPGEYAEIRTILGRRPTSGELAMYSVMWSEHCSYKSSKKYLRQFGDKVSPAMKKNLMVGMGENAGVLDVGEGWAVTFKIESHNHPSYIEPFQGAATGVGGIVRDIISMGARPVAVMDALRFGDINDPDTARVVHGVVSGISFYGNCLGLPNIGGETWFDSVYQGNPLVNALSVGVLRHEDLHLANASGAGNKVVLFGARTGGDGIGGASILASDTFSEGGPTKRPAVQVGDPFAEKVLIECCLELYREKLVEGIQDLGAAGISCATSELASNGDGGMYIQLEKVLLRDPSLTAEEILMSESQERMMAVVTPEKLAGFLAVVEKWDVETSVLGEVTDSGRLIIDFHGEEIVNVDPRTVAVDGPVYDRPVAYPTWIDALQADTASALPRATDAATLQEQFLALLGSPNLADPSWITDQYDRYVMGNTALSFPDDAGMIRIDEESGLGFVISTDANGRYCQLDPYRGAQLALAEAYRNVAVTGAVPVGISDCLNFGSPENPEVMWQFSQAVEGLADGCLELEIPVTGGNVSFYNQTGDQPIHPTPVVAVLGVIDDVARRVPSGWQDDGHNIYLLGITREELDGSAWSAVVHDHLGGVPPIVDLGREADLAGLLHAASIEALIDSAHDLSTGGLAQALAEAVLRFGVGARVWLGDILERDGIDASVALFSESTGRVLVSVPREDDVKFLGLCEGRDYPVLRIGVTDATAPVLEIQDYFTVPLTELQSRHRSTLPNAFA
>NZ_CP016282.1|WP_066600187.1|3592022_3592661_-|DUF1211-domain-containing-protein
MESARARYRRLLDTGRSTERLEFFSDAVFAIAMTLLVLDIRLPDTTAADLGRALANLAPEYFAYALSFVVIALNWAGHHRKFRLITGYDRRLVQLNLLLLLLVAFLPFPTSVLSEYAQTPAVVLYAATVAAISGVQCLIWLAARASGLLDAAVDRPLFFYVLRLMLVTVVVFTASIPVAVLGSADWALYSWILALPLTIAAARWAPSPSPSG
>NZ_CP016282.1|WP_084021242.1|3591176_3591980_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MNASSALGAVTPSPLARRNPTVKLAILFIVSLALLFVFDPVTPGLLYLLGLAAVLGFARIPLRTLALAHLPFVGFALGILVVNALSRPGEVLVDLPPIRVTVAGLLVGSALALRTMAIGILSIGFIGTTDPVSLMTSLHQHARLSARVTFAVLAGYRMLQQLPREWQVIRQAQSVRAPLRSDGATRFGIREFGRAAFTLLVVSLRRGERMSQSLESRGLGLGARTVWRPVPLGPADWLLLAGTLGVLALVIVGVSRLGLGLGPGMLL
>NZ_CP016282.1|WP_066598115.1|3589281_3591180_+|ATP-binding-cassette-domain-containing-protein
MSDIAEPAVTAPAVAVPASAVPAVEFRDVTVTFPRQDRAVLHGASFTIAAGERVVLFGPSGAGKSTLLATISGVVPHSVIAQVAGSVTVAGRDTLVTEVVDLSRHLGVLPQDPDSAVCLPGVEQELAFVLENRAVPPSQISDRIDAVLAVVGAGRLRERQTGTLSGGESQRVALAAALIGGPEILVLDEPTSMLDADGLRQVRDAVDAAARPGTVAVLLVEHRLDEYAGSRGAAGLPERCIVLGADGAITHDGPTASVLPAAALDLHRAGCWLPGDIELQAALGLSGGLTAPDVQRALLALAGEGCGAPEVFGPVVLAGRDLAVSRDAAPRAVRRRPWPFRRVAHNADDGQATRGGQTTPDGQSIRAGQAAHDDQTDSGGLPARAGQTEGRRVLLSGVNLELRAGEIVAVLGRNGAGKSSLLLTLAGLLAPAGGTVTGARPGLVFQNPEHQFLGNTVREEIAVGLPVASARVDRVLTEHGLGPLADRNPYRLSGGQKRKVSLAAMLVHERPSLLADEPTLGLDRRSTIATIAAFRRAARAGRGILLCSHDLRTVATLADRVLVVADGRIVADGSVVEVLRQGDLLARAGITVSPLLRWLVTRLDSVAQVRRVLDALDATVDAGAHVPTVEAQ
>NZ_CP016282.1|WP_066598113.1|3588646_3589273_+|ECF-transporter-S-component
MPAAPSSTAASPASATRPIHRFTLKDLVLIVVLGVVFGFLYWALVQAWTGLSILLGPAGDLAQHVLLGGWLLVAPIAVAIVRTRFAGVIAEILASVIEVVFLGSAVGPILFVAAAIQGAGSELPFALRRYSSFGWGSYALSGLLGSGFVFIFSAFRSGWFGQDLFFLRLGIQLASGVILGGLLAKVIVDALAKTGVVDNYAIGRALNS
>NZ_CP016282.1|WP_066598110.1|3587840_3588485_+|hypothetical-protein
MTHPTPTLPDPAPMAFTPLEFGVGARITLAVMSDRYADIILDAIRSTDTAGLTVDTGVVSTFVGGAEADILRYLTDLIGAAAQSGHHVTATVHFSRGCPGEVVCALPGGAGPLRSEIPAATPVGIIAAGEWALYPLDDGGRPGVQPDHMRDIYAAIDFAKANGSFVASEHFVTRLQGDLATVLQTAAAGWILVGQSVQHVTSHLTLSINSPSAH
>NZ_CP016282.1|WP_084021241.1|3586941_3587526_+|DUF3817-domain-containing-protein
MLAQWPVEVPSFDGCSAQAGLTGWTLTCPPITLPGVLPVSPRLFYRILSIAEAITWTILITAMLLKYVFAPGDFGDGAVRVGGFVHGLVFLAYGITAVLVGVNQHWRPRLMLLAVSTAVVPYATIPFDRWLERRNLLDGPWRREATDDPRDHTVVSRLLRVGLARPLLLASVLVVGLVAVFTTLLVMGPPGGGA
>NZ_CP016282.1|WP_066598106.1|3585909_3586935_-|L-glyceraldehyde-3-phosphate-reductase
MTYLPADTRYESMPYRRTGRSGLKLPAISLGLWQNFGDGAPVETQRAILRRAFDLGVTHFDLANNYGPPYGSAETNFGRIFAEDFSAHRDETVISTKAGYDMWPGPYGDFGSRKYLLSSLDASLNRMGLDYVDIFYSHRADPETPLEETMGALHTAVTSGRALYAGISSYSPERTRQAAEILAEMGTPLLIHQPSYSMFNRWVEGGLLDTLDDLGVGCIAFSPLAQGLLTDRYLNGVPEGSRASQAGSMSRDMVNDATVGRIRALTEIADARGQSLAQLALSWVLRRGTVTSALVGASSVTQLETNVAAIDNLVFTDEEVTAIDAHAVDLGINLWEPSSAV
>NZ_CP016282.1|WP_066598122.1|3597995_3598937_-|SDR-family-NAD(P)-dependent-oxidoreductase
MTWNPRALPDQTGRTIVVTGANAGLGYFTSEQLARAGAHVVLACRNPAKAAAAVAAIRGRVPGASVSTLELDVADLTSVRRAAERMLDLPQLHGLILNAGIVHPPTDRSVSLDGTELVLATNYTGHFLLTSLVLPVLQRTPGSRVVSLGSMISRLMDSSLDDLQLEVTYNGWKAYAQSKIAMQVFGFELDRRLHAAGLDGPTGVQSLVSHPGYSISGLTPGIRGVNEVSRAKRFVDTLQGFIGAQGKDAGAWPTVRAAIDPAAVGGQYYGPRFLTRGTPTLQRPTRTSLDRGIADRLFARTEALVGAPFSLPA
>NZ_CP016282.1|WP_066598124.1|3598933_3599404_-|chorismate-mutase
MAVNEELPAGAGQDAINELQGIRQSIDNIDAALIHLLAERFKFTQSVGRLKAEHGLPPADPAREFLQIQRLRGLAEDARLDPAFAEKFLNFIIAEVIHHHEKIAGDTSSGVRSAGNTGAGTVSGDAAVSAPTGDAPADAPDASAPGAGQGSAGPAA
>NZ_CP016282.1|WP_066598130.1|3599487_3600375_-|DMT-family-transporter
MGVVWGASFLFMKIALEGVSFGQVAWSRLVLGGLTLGLIVLITRPRINNGPVLPREGVVWLHFLVIAFTGCFIPHLLFAWAEQYVSSSLASIYNAVTPIMTAVMVTAVFRVEKLARDQIVGVLVGIIGVVVIIAPWQYTALTGDLWGQLACLGAALCYGFTFGYTRKHLSGRPIAGTTFAFLNIGLAGAAMLLFTPVLAWQPVALTTPIVLSLVTLGALGTGLAYIWHINVLRAWGPTTTSTVTYVTPVVGVLLGVLILAETFSWHEPLGALLVLMGILLTQKRVRLPLRAPRPA
>NZ_CP016282.1|WP_066598132.1|3600521_3601187_-|GNAT-family-N-acetyltransferase
MSAQRPDEHVLTGRFVCLERLSHAHLPELHRAIAHPAVFAGGYGGGPHGLPADLDEFVAFASKYYQWDALPYAVRVVSGPHAGDLVGTSTLGDIDLPNEALHLGWTAYAPQVWGTAVNPETKLLMLGAAFEHGFGRVKIQADVLNSRSRAAILGIGAQFEGINRRVQRRADGSWRDTAVYSVLADEWPVVQAGLQKRLEGFAGTSVEYSNPRAPRRRVTPA
>NZ_CP016282.1|WP_066598134.1|3601264_3602551_-|adenylosuccinate-synthase
MPAIVLIGAQWGDEGKGKATDLLGSRVDYVVKFNGGNNAGHTVVVGTEKYALHLLPSGILTPGVTPIIANGVVVDIEVLFEELDALSSRGVDVSKLRVSANAHVITQYHRTMDKVTERFLGKRQIGTTGRGIGPTYADKINRVGIRIQDLFDENILRQKVEGALGQKNHMLVKVYNRRAITVDEIVDDLLSYAERLRPMVADTALLLHEALVDGKTVLFEGGQATMLDVDHGTYPFVTSSNATSGGAVTGSGIGPNRIDRIIAVVKAYTTRVGAGPFPTELFDESGEFLRAKGFEFGTTTGRPRRCGWYDAPIARYTARINGVTDFVLTKLDVLTGLETIPVCVAYEVDGVRYDEVPVSQSDFHHAKPVYEEFPGWTEDITMVRRFEDLPKNAQDYVLALEAMSGARISAIGVGPDREAILTRHDLID
>NZ_CP016282.1|WP_084021244.1|3602554_3603073_-|DUF3151-domain-containing-protein
MTGANLLDQPETLLPAEPEVTEALSRTGMQDIATVVAAHPKSSLAWAALADVTHSQGRLLEAYAYARVGYHRGLDALRKAGWRGQGPIPWSHAPNRGVLRALFALRRAAAEIGETDEFERLTEFLNGADATVIPLLRSESDDSQKFPAAPPAVSPGEDPAPPTAAFFIQGEN
>NZ_CP016282.1|WP_167550860.1|3603181_3603754_-|TetR-family-transcriptional-regulator
MTGTKRAILDAALEIAAERGISGTTMDDVAERAGVAKGSLYYNFASKDKLFEGLLGEGMAALTEVLREARTGVEGWSAIEALVTTLLGSIARNTALAKIIAGDIFRTDRAWREASFTFRHDALAEFEVAITEALPEASAVGASALMASSVFGATLMAGLEWLLFDEERPQAEVVAAVLCTFSGRLVPATH
>NZ_CP016282.1|WP_066600189.1|3603890_3604502_+|hypothetical-protein
MRITLTNVTKGPKDSALPLTSLEFESGAVTLAQAETERRPTVLGLIASGRMRPDAGTVTLDGHTDYAGLRRHIALIDALGVSEPAPDVTVAEVVSEELMFAGRVGHRRAVAQLLSELGLADQARANMADLAPDSRIHLLTELAVLRDDVQGIVLTSPDRHGGDPLGWWQLAGDLAVRGYAVLVIAGDASAHAINALDRSGAEL
>NZ_CP016282.1|WP_066598136.1|3604498_3606856_+|YhgE/Pip-domain-containing-protein
MKIFAMIRAELARLTATTMSRVALVALMLVPVLYGGLYLWANQDPYAGLDRVPVALVVADTGTEADGTTTNYGSDVAEQLIDDGTFDWHKVTADTAQAGVADATYDFSVTIPADFSSSIASSSTDSPHQATITLTTNDTNSYLASTIGSQAAQSIRDAIVARVNEQAADQLLIGLSDIRSSLVDAADGAGQLTDGAGTAADGGTSLADGASQLADGTGQLATGAGSLADGTGQVADGASKVADGTGQVASGADALATGAGTLSTGAGSLASGTAQVATGADSLATATGQVADGTAALSQGAASLADGTGKVSAGAAQVAAAAQKVADGTAALNTAAQQASAGVAGAGAVYTAAQTALADQLTADGLSPAQIDEALATLTPIGGTLTQSGAALTQAGTAIATLSTGTTQLAAGAAATATGAQQSADGATTLATGAATASAGARKTADGAATLATGAHQSADGASALATGAGQAASGAATLAAGADQTAAGAATLSSGATSAADGAAALSTGASSAKTGADSLATGASSLSDGLLGLKTGAGTLRDGLTNGVNSIPDTDAATRDLQGSTIADPVDLQKAAVTSAGTYGAGLAPFFASLAGWIGIYALFLIVKPVSRRAITALHSPLKITLAGWLTPGILGLLQMAALFGILTGVLHFEVHNPVGTYAMMGLAAMTFAAIILALNVWLGSVGQFVGLVLMVIQLVTAGGTFPWQTLPAPLAFLHHVMPMSYAVDGIRQLMYGGNPATALNDAGVLLLWLTGALVLAAIGVVRMTHFRTLRDLKPSLIG
>NZ_CP016282.1|WP_066598137.1|3606989_3608033_+|hypothetical-protein
MTAGPILHADADSFFASVALRSRPELAAQPVAVVAHVYIASATYPARARGVRAGMLAQDALRQCPELMLIDVPRAEIEEVGDALFDIFHNSAVAVEPGSIEEAFLDVGAADQAGAVEAGQVLRRRVARELGIPISVGVGRTKLMAKLASRRAKPDGLFVIDVAEETVLRTTLPLSEVWGIGATTLARLHRIGVIRLGDVDGIPQNELQHVCGTAMARRLWRIREGTDDAVVRPVEARTSLTAEGSTAGYDRPDKTPTELVQACVDRLCKRAERAGLAGTGITLTLRPELGGKAIVLKRTLMAATTGRDTWLAVAGDLLAGERVPRLAGLRVSLTGLLPLDRVQHTLF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_9

3649405-3649505

Orphan

Consensus_repeat	Method
CCGTGGGGCTGGGTCTCGAGGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016282_9

>merge|NZ_CP016282|9|3649405-3649505|CRISPRCasFinder
CCGTGGGGCTGGGTCTCGAGGGCCTGGTCACCGGGTCTACTTCGACAAGCTCAGTACGACGTCGACAAGCTCGACCGCCGTGGGGCTGGGTCTTGAGGGCC

>NZ_CP016282|9|9|3649405-3649505|CRISPRCasFinder
CCGTGGGGCTGGGTCTCGAGGGCC	TGGTCACCGGGTCTACTTCGACAAGCTCAGTACGACGTCGACAAGCTCGACCG
CCGTGGGGCTGGGTCTTGAGGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_084021255.1\|3656903_3657797_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP016282.1\|WP_066598181.1\|3644194_3645025_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP016282.1\|WP_066600198.1\|3641423_3642767_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235687
NZ_CP016282.1\|WP_066598182.1\|3645021_3645849_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213260
NZ_CP016282.1\|WP_066598177.1\|3639221_3639476_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379915
NZ_CP016282.1\|WP_084021254.1\|3655779_3656907_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|163581
NZ_CP016282.1\|WP_066598188.1\|3654731_3655724_+\|putative-F420-0-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274826
NZ_CP016282.1\|WP_066598183.1\|3646786_3647803_-\|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|163554
NZ_CP016282.1\|WP_066600200.1\|3649560_3650403_-\|acyltransferase	unknown	unknown	gnl\|CDD\|143592
NZ_CP016282.1\|WP_066598180.1\|3642861_3644013_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378117
NZ_CP016282.1\|WP_066598191.1\|3658884_3659370_+\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|119345
NZ_CP016282.1\|WP_066598186.1\|3652256_3652733_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016282.1\|WP_066598178.1\|3639607_3641107_-\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP016282.1\|WP_066598190.1\|3657826_3658888_+\|2-phospho-L-lactate-transferase	unknown	unknown	gnl\|CDD\|237443
NZ_CP016282.1\|WP_066598192.1\|3659574_3660477_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP016282.1\|WP_066598187.1\|3652930_3654241_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP016282.1\|WP_066598176.1\|3638848_3639127_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP016282.1\|WP_157109374.1\|3647811_3649248_-\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|236240
NZ_CP016282.1\|WP_066600199.1\|3645845_3646709_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP016282.1\|WP_066598185.1\|3650676_3652014_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|185378

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_084021255.1\|3656903_3657797_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.44239e-97
NZ_CP016282.1\|WP_066598181.1\|3644194_3645025_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	7.4851e-42
NZ_CP016282.1\|WP_066600198.1\|3641423_3642767_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235687	PRK06062, PRK06062, hypothetical protein; Provisional.	0
NZ_CP016282.1\|WP_066598182.1\|3645021_3645849_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.67035e-114
NZ_CP016282.1\|WP_066598177.1\|3639221_3639476_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379915	pfam17032, zinc_ribbon_15, zinc-ribbon family. This zinc-ribbon region is found on a set of largely microsporidia-specific proteins.	0.000194914
NZ_CP016282.1\|WP_084021254.1\|3655779_3656907_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|163581	TIGR03869, transport_system_permease_protein, proposed F420-0 ABC transporter, permease protein. his small clade of ABC-type transporter permease protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and an ATPase (TIGR03873). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with an F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this permease protein is a component of a F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.	7.93609e-120
NZ_CP016282.1\|WP_066598188.1\|3654731_3655724_+\|putative-F420-0-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274826	TIGR03868, transport_system_substrate-binding_protein, proposed F420-0 ABC transporter, periplasmic F420-0 binding protein. This small clade of ABC-type transporter periplasmic binding protein components is found as a three gene cassette along with a permease (TIGR03869) and an ATPase (TIGR03873). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this periplasmic binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.	5.56694e-136
NZ_CP016282.1\|WP_066598183.1\|3646786_3647803_-\|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|163554	TIGR03842, F420_CPS_4043, F420-dependent oxidoreductase, CPS_4043 family. This model represents a family of putative F420-dependent oxidoreductases, fairly closely related to 5,10-methylenetetrahydromethanopterin reductase (mer, TIGR03555), both within the bacterial luciferase-like monoxygenase (LLM) family. A fairly deep split (to about 40 % sequence identity) in the present family separates a strictly Actinobacterial clade from an alpha/beta/gamma-proteobacterial clade, in which the member is often the only apparent F420-dependent LLM family member. The specific function, and whether Actinobacterial and Proteobacterial clades differ in function, are unknown. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP016282.1\|WP_066600200.1\|3649560_3650403_-\|acyltransferase	gnl\|CDD\|143592	cd07568, ML_beta-AS_like, mammalian-like beta-alanine synthase (beta-AS) and similar proteins (class 5 nitrilases). This family includes mammalian-like beta-AS (EC 3.5.1.6, also known as beta-ureidopropionase or N-carbamoyl-beta-alanine amidohydrolase). This enzyme catalyzes the third and final step in the catabolic pyrimidine catabolic pathway responsible for the degradation of uracil and thymine, the hydrolysis of N-carbamyl-beta-alanine and N-carbamyl-beta-aminoisobutyrate to the beta-amino acids, beta-alanine and beta-aminoisobutyrate respectively. This family belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 5. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. Beta-ASs from this subgroup are found in various oligomeric states, dimer (human), hexamer (calf liver), decamer (Arabidopsis and Zea mays), and in the case of Drosophila melanogaster beta-AS, as a homooctamer assembled as a left-handed helical turn, with the possibility of higher order oligomers formed by adding dimers at either end. Rat beta-AS changes its oligomeric state (hexamer, trimer, dodecamer) in response to allosteric effectors. Eukaryotic Saccharomyces kluyveri beta-AS belongs to a different superfamily.	7.05024e-141
NZ_CP016282.1\|WP_066598180.1\|3642861_3644013_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|378117	pfam09084, NMT1, NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.	7.44933e-36
NZ_CP016282.1\|WP_066598191.1\|3658884_3659370_+\|ASCH-domain-containing-protein	gnl\|CDD\|119345	cd06553, ASCH_Ef3133_like, ASC-1 homology domain, subfamily similar to Enterococcus faecalis Ef3133. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation.	2.90662e-45
NZ_CP016282.1\|WP_066598178.1\|3639607_3641107_-\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP016282.1\|WP_066598190.1\|3657826_3658888_+\|2-phospho-L-lactate-transferase	gnl\|CDD\|237443	PRK13606, PRK13606, LPPG:FO 2-phospho-L-lactate transferase; Provisional.	4.53392e-142
NZ_CP016282.1\|WP_066598192.1\|3659574_3660477_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.89617e-15
NZ_CP016282.1\|WP_066598187.1\|3652930_3654241_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.10862e-33
NZ_CP016282.1\|WP_066598176.1\|3638848_3639127_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.99847e-07
NZ_CP016282.1\|WP_157109374.1\|3647811_3649248_-\|dihydropyrimidinase	gnl\|CDD\|236240	PRK08323, PRK08323, phenylhydantoinase; Validated.	0
NZ_CP016282.1\|WP_066600199.1\|3645845_3646709_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.19492e-25
NZ_CP016282.1\|WP_066598185.1\|3650676_3652014_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|185378	PRK15481, PRK15481, transcriptional regulatory protein PtsJ; Provisional.	1.22711e-76

>NZ_CP016282.1|WP_157109374.1|3647811_3649248_-|dihydropyrimidinase
MMKTLIKNGTVVNSTGTATADVLIDGDIIAAVLAPGSTLLGFDIERNVDTVIDAAGKYVIPGGIDAHTHMQMPFGGTEASDTFETGTRAAAWGGTTSIVDFVVQYAGENVLDQYAAWQDKARGECAIDYGFHQILSDVQDSSLVAMDELVNEGVSSFKLFMAYKGVFLSDDGQIVKAMQKASSNGSMIMMHAENGSVIDLLVQQAIAAGNTTPYYHGLTRPWQAEEEATHRAIMLANLTGAPLYVVHVSAKQAVEQIAIARDRGQNVFGETCPQYLYLSLEDQLGAQSDEWGTFEGAKWVCSTPLRSKAEGHQHHMWQSLRTNDIQMVSTDHCPFCMKGQKDMGLTDFSKIPNGIGSVEHRMDLLYQGVVDKQISLERWVEVTSTTPARMFGMYGKKGVIQPGADGDVVIYDPNGHTSIGVDKTHHMNMDYSAWEGYEIDGHVDTVLSRGKVVIDNNQYLGAKGDGKYIKRGLSQYLI
>NZ_CP016282.1|WP_066598183.1|3646786_3647803_-|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase
MDFGAVLQTNPPSARTVQLAVLAENHGFSHVWTFDSHLLWQEPYVIYSKILNETRKVIVGPMVTNPATRDWTVTASTYATLNEMYGNRTICGIGRGDSAVRVTNGRPSTLKTLRESIHVIRELANSRSVEYNGATLQFPWSQGSTLDVWVAAYGPLALKLTGEVGDGFILQMADLDVAEWMIKTVRTAATNAGRDPEAIKFCVAAPMHIGDDWQHMRDQNRWFGGMVGNHVADIVAKYGEGSAVPKALTDYIKGREGYDYNEHGRAGNTHTDFVPDEIVDRFCLLGPAEAHIEKLKALKELGVDQFAGYLQHDNKEETLRVYGETVIPALADHITAKV
>NZ_CP016282.1|WP_066600199.1|3645845_3646709_-|ABC-transporter-permease-subunit
MPRRILVGALGVLALALLWELYIVVGPADGVIVGGVTVLPRASEMAMPHLWVMLERIVEPVTGSSSAVPMWQAVLEASLFTLGIAAVGWLVGVTVGLALALLMQRFKLAESAILPWIILSQTVPLIALAPLVRRWGAQIEFGVFSWENWMSVALIASYLAFFPVSIGALKGLGSPDANHVDLMHCCAVGWWKTLWRLRLPASVGYLLPALRLAAASAVIGSVVAEVSIGLRGGIGRLIVEYAGAAGSDPGKPWAPIFGSVLVGLVAAGFVGLISLFLRRFRRGEVAA
>NZ_CP016282.1|WP_066598182.1|3645021_3645849_-|ABC-transporter-ATP-binding-protein
MTTAALPVQHAVEVNAVSRVFAGRKGASVTALDAVSLTVAPGEFVSLIGPSGCGKSTLLRLIADLDTPTDGSIEVFGKSARQARIDQDYGIAFQQAGLLPWRTVTGNIELPLELHGTGKAARRDRAAELIELVGLSDFAGHYPDQLSGGMQQRVAIARSLAESPSLLLMDEPFGALDEMTRERMQNELVRICAETSAAVVFVTHSIPEAVFLSNRVVVMSPRPGRIRDVLSVNLGRMSDRGENLREDEDFFHSVSQVRELLHGATPTGARGVETR
>NZ_CP016282.1|WP_066598181.1|3644194_3645025_-|ABC-transporter-permease-subunit
MSAGASTSVTAPAVAGPARQGPSRSGLARTVLPPVLLGLVAILLWQGAVTVLAIKPFILPGPFAIGEQFTANLQNVLNGMVVTGRNALIGLVLGAIVGVLLAILSALVRVFDEMAAPVVAAFAVVPIVALAPVLYTMFGANAETARQLVAALAVFVPVYFNTLKGLRMVRPVHRDLMRSYAASSWQATKTVTLPTAVPFVFTGLRIASSLAVISALIAEYFGGPVGGLGKSITSAASSSNYGLAWAYVLGSIILGLLFYCAALGLEKLVSRRAPTA
>NZ_CP016282.1|WP_066598180.1|3642861_3644013_-|ABC-transporter-substrate-binding-protein
MKHSTRWLTTAGAVAAASALVLSGCSATNDTASTDDSAGGGLTPVTLQLQWVAQAQFAGYYAAVDQGYYEDEGLDVTIEEGGADIVPQDVLAAGDVDYAISWVPKVLGSIEQGANITDVAQIFERSATTQISFKDKNITSPADLKGKNVGSWGYGNEWELFAGMQKDGVEVGDISLVQQAFDMNAFLAGDIDAAQAMTYNEYAQVLETINPDTGELYQPEDLNVIDWNKEGTAMLQDAIWANTDKLADDEAYADQTVKFIKASIKGWIYAAQNPEEAATIVADAGSALPAGHQLWMTNEVSKLIFPSTNGVGLIDEAAWANTVDIAMNTKNETGATIITTDPPESAYSNEYVQKALDELTAEGVDVMGADWTPTDVTLKEGGE
>NZ_CP016282.1|WP_066600198.1|3641423_3642767_-|aspartate-aminotransferase-family-protein
MDSTTDTGTSTDTELGLNDLTTRLDKAHVFHSWSAQGALKPLVIAGGLGCRVWDHEGRTYLDFSSQLVNVNIGHQHPAVIKGIIEQAQLLTTIAPSTANLARGEAAKRIVDRAPDGFNKVFFTNGGADANENAIRMARLHTGRDTVLSTYRSYHGNTGAAIVATGDWRRIPNEFARGHVHFFGPYLYRSEFWARTPERECERALQHLERVIQSEGATSIAAVLLESIPGTAGVLMPPPGYLTGVRALCDKYGILLILDEVMVGFGRTGRWFAFEGSGVVPDLITFAKGVNSGYVPVGGVIISDAIAADFDTTVFPGGLTYSGHPLAMASIVAALDAMEDEGIVENAARIGADVLGPGLTALAEKHPIIGEVRGEGVFWAIELVADRETRAPVAPAVMARIKTELLARNLLPFVQDNRIHVVPPCVVTDDEVAEALAIYDEVLCLDLL
>NZ_CP016282.1|WP_066598178.1|3639607_3641107_-|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MNDLPVLTHWIDGVPGTGTSTRTAPVYNPATGAVQRLVSLASAVDVDTVVASAQAAYPAWRDASIAKRQGVMFTFRELLNARKGELADILTNEHGKVTSDALGEIARGLEVVEFALGLPHLAKGEFSENVSTGVDVYTLRQPLGVVGIISPFNFPAMVPLWFFPIAIAAGNCVVLKPSEKDPSAANWLAALLTEAGLPDGVFNVVHGDKEAVDALLVNPDVQAISFVGSTPIAKYIYETAAHHGKRVQALGGAKNHMLVLPDADLDLAADAAVNAGFGSAGERCMAISVIVAVEPVADELIAKIAERVKGLKVGDGMRGCDMGPLITEAHRDKVAGYIDIAHADGAEVVIDGRGIEVDGDASGFWLGPTLFDKVSVDSAVYQDEIFGPVLSVLRVASYTDGVAVINASKYGNGTAIFTNDGGAARRFQHEVQVGMVGINVPIPVPVAYHSFGGWKDSLFGDAKAYGPAGINFYTREKAVTARWLDPSHGGINLGFPQNT
>NZ_CP016282.1|WP_066598177.1|3639221_3639476_+|zinc-ribbon-domain-containing-protein
MFLLFGTRTSEAVVNVVSFVCAYCNTMAEQHVVKRSTKVTLFFVPLFPISSSHVNVCANCGGHTGLTTAQVRHSLDWARARSAG
>NZ_CP016282.1|WP_066598176.1|3638848_3639127_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MLGLIISLIVVGIIAGAVARLVVPGRQNISIPMTIVLGIVGSFVGGFLGFLIFQHDPMDGFFQPAGIIGSIIGAIIVLLIYIRVSGRSTARG
>NZ_CP016282.1|WP_066600200.1|3649560_3650403_-|acyltransferase
MVRAAITQTTWTGDIDSMLDKHEKFARDAAADGAQVICFQELFYGPYFGITEDAKYYDYAEPADGPIVQRFAKLAKELNLVMVLPIYEEEQPGVYYNTAVVVDADGTILGKYRKHHIPHLDKFWEKFYFRPGNLGYPVFNTAVGPIGVYICYDRHFPEGWRELGLNGAQIVFNPNATKPGLSNRLWEIEQPAAAAANGYFVAAPNRVGREDNEYGEAAVTFYGTSQFVDPQGNYVGELGSGVDEEVVIRDLDLGMIRQVRNNWQFYRDRRPESYTSIPKP
>NZ_CP016282.1|WP_066598185.1|3650676_3652014_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MQLYLDEIEQATPAGIAAALGRLISSGRLAPGERLPTVRDLAALLGVSPATVSHAWQALSSAGLIVSRGRSGTFVREPSRHWLPARTQTLAGHVSDARIDLSRGTPDPLLLPALGPALSRVSQRAMTPSYQALPVIPELLTVLTGSWPYPAEAITVVDGALDAVSRSLEQVARFGDRVIVEDPGFPPFFDLLDQMGIERLPVAVDAEGIVPDAFQAALALSPAAVILQPRAHNPTGASMSADRAAELARLLGASPRAAHTVVIEDDHSGAISTSPDVSLGRWLPERVLHVRSYSKSHGPDLRIAALGGPAALVDRIVARRMLGPGWTSRMLQTILHELLTDGASMAQVNEARHVYFARQKALADALTGFGLPLTRADGINAWVPVADERDAIVRLAASGIRVAGGSPFLASERPESFIRVTAGALPDDVLPVARAIAAAAGVLPV
>NZ_CP016282.1|WP_066598186.1|3652256_3652733_+|hypothetical-protein
MFDTFFGLPLHPLVVHATEVIVPTAALVLLLAAAWPRFRRWARFLPLGLALAALVLVPLSTESGEALEERVSESGLVETHADLAEGLLPWVIGLVVVAGVLLWWNWSERSARKPMKWVAIVLIVAAALVSTGTVVQAVRIGHSGAAAVWSDSVGTPPK
>NZ_CP016282.1|WP_066598187.1|3652930_3654241_+|FAD-binding-oxidoreductase
MIDGFAGTILVPGSADYPVAATAFGTLGSPAMIARPTTAVAASAAVRYARAQGLPLAVRGGGHSPFSTNDGGMVLDLRDIREVEVLDGNRVRIGGGAIWGDVALELQPYGLAISSGDTYSVGVGGLTLGGGIGWLVRQQGLAIDSLVEAEVVLLSGDIVTASATAEPELFWALRGGGGNFGVVTRFTFQAHPLPGVIAGSIDVDPALLAETLHDWRDVMRQAPEQLNSTVIAMPVFGPGMPVVTKILVCFGGDDAGQALTAIQPLLDLPGVRTEDVAPKPYLEMLEQGTPAPAPMRMVTHNGFASDLDDDLIGRLAATHATLSGFGAATLMLRYLRGAFNRTPADATAVAYRDAEAFVVAAAFLPPDAPADAEERIQDGWGAVAEAMLGSYGNFTPYPNSGTITSMYPPATAERLRAAKRHYDPGNVLAFNHNIVP
>NZ_CP016282.1|WP_066598188.1|3654731_3655724_+|putative-F420-0-ABC-transporter-substrate-binding-protein
MKTRYPTFAAAAAVLLLAGCASGSTGAAPVATASPGGPGAYPVSFDNCDTSLTLTAAPERIVTIKSTTTELLLALGLGDRIVGSAFLDGPLPASLAEEGADLNVISDFVPGQEAVLTLNPDFVYGGWESNFSAEGVGERDALAALGIGSYVSPAACKGDAMPDPLTFDTVFGEIDEAGTLFGVPDAAATLVSDQEAALAALKPATGETTALWYSSGTDTPYVGAGIGAPQMIMDAAGLTNIFADVHDTWTSAGWESVVAANPSVIVLVDATWNTADSKIALLEGNPATAGLDAVVNHRYITVPFAAGEAGIRNVEAAGSIIDQLAALDAQ
>NZ_CP016282.1|WP_084021254.1|3655779_3656907_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTGTTHPRDTRPSVQKRAAPGGSRGAASVTVRRGRPGRYLFWLVTAFVALLLGCAVAVTIGPANVSLAQVVGSVGSHLGLPGLTGGTPVPPLTDAIVWQLRMPRVLTAAMVGAGLALSGAVMQSVTRNPLADPYLLGLSSGASLGAVCVVILGVGFALPAAAFAGALIALFATLNIARVGGSITPGRAVLAGLAIAQLGSAGTSFIIFWAAKGDSYREILNWLLGSLAGSSWTSVLISTTALVLVGTGILLAASRLDAFTFGDTNAASLGINVNATRWGFLVAVALLTGAMVAVSGAIGFVGLILPHLVRGLSGPGHRRLLPLVAVVGALFLVLADTLARTVFDPRELPVGIITAFIGVPVFILLIKRKRSAAWA
>NZ_CP016282.1|WP_084021255.1|3656903_3657797_+|ABC-transporter-ATP-binding-protein
MSGERGVAATSAPRVAANPPLKSAEGAVFRNSGAPDDGVVLDGISLSIEGTRILHEISARLPSGTVTGLLGPNGAGKSSLLRIIAGIDRADAGTVTLDGTVVGLLRRREAARRIALLEQNVAPSVDLSVREVVLLGRIPHRSRLLGSFGGEDDLGVATEALAMVGAADLIERRWHTLSGGQQQRVQIARALAQRPSLLLLDEPTNHLDVSAQLSLLHQVRGLGLTSVLALHDLNLAAAYCDRIVLLQAGRVAAFGTPAEVLSPDIIEAVYGVDCDIVPHPRTGHPVIVFSGPAPTGT
>NZ_CP016282.1|WP_066598190.1|3657826_3658888_+|2-phospho-L-lactate-transferase
MTRVTVLAGGVGGARFTRGLLQYLASEDARDAANSPFGGAEGALSGTSAEEQASEVTVIVNTGDDMWLDGLRICPDLDTVMYTLGGGISEEQGWGRAEESRRTSAEIAAYGRGWSWFTLGDLDLATHIVRTDLLKNGATLSAATEFLCRRWQPGARLLPMSDQFVETHVRLAADADEHRAGDLIHFEEWWVRYRATVPVTEFVQVGLADAVAAPGVLEAIRDADVVILPPSNPVVSVGTILAIPGIRDALRATSARVVGISPIIAGSAVRGMADACLSTIGVETSALAVGLHYGSRQGDGVLDAWLVDETDAAAVPALEAAGIRSAAVPLWMTDVAATAQIAAEALRSEVATR
>NZ_CP016282.1|WP_066598191.1|3658884_3659370_+|ASCH-domain-containing-protein
MTGPLDPPVGTGGDHAAPDALPVAEFAFPGPLRDRLVAAILDGSKTSTTSTLVEYGIEDEPLPEVGARQVLIDSAGQPVAVIETTAVQVVRLADVDVRHARDEGEGHDSVAGWRAAHEAFWTSPDMRGYLNDPTFSVTDDTPVVLERLRVVELLPGEQPRA
>NZ_CP016282.1|WP_066598192.1|3659574_3660477_+|alpha/beta-hydrolase
MPYLAVGSGTPLLFLPGLTPNHEPPTGADRRFQTRMLLPFAATRRVWWVNRRPGLDPDATMADIAADYALAMRQRFDGPVDVMGQSTGGSVALQLAADHPDLVKRLVIVSAAHQLGIEGRDTAMRVADDVLDGRPRTAYAELMRMLGSGAGSQRVLSGIGWLLGKNYFAHATADLMTTIRAEDGFELYSRLGDITAPTLVVGGERDAFYTPELFRQTAAGIPRGRLALYPDRGHLATTSDPRFVSDVLSFLDPPDEPADDPAGTPTAERPHDAPARPGDGGPDQPSASARPRSDHDDLAR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016282_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016282_10

3871384-3871463

Orphan

Consensus_repeat	Method
CACGCTGGTTTGAGCCTGTCGAAACCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016282_10

>merge|NZ_CP016282|10|3871384-3871463|CRISPRCasFinder
CACGCTGGTTTGAGCCTGTCGAAACCAGGCGACCAACCCGAAAAACGCACCCGCACGCTGGTTGAGCCTGTCGAAACCAG

>NZ_CP016282|10|10|3871384-3871463|CRISPRCasFinder
CACGCTGGTTTGAGCCTGTCGAAACCAG	GCGACCAACCCGAAAAACGCACCC
GCACGCTGGTTGAGCCTGTCGAAACCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016282.1\|WP_066598354.1\|3872026_3873613_-\|carboxylesterase-family-protein	unknown	unknown	gnl\|CDD\|365897
NZ_CP016282.1\|WP_157109281.1\|3864304_3865186_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP016282.1\|WP_066598356.1\|3875035_3876322_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|274819
NZ_CP016282.1\|WP_066598352.1\|3868601_3869420_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224049
NZ_CP016282.1\|WP_066598361.1\|3880312_3881317_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187575
NZ_CP016282.1\|WP_066598345.1\|3859971_3860610_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP016282.1\|WP_066598353.1\|3870452_3871364_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP016282.1\|WP_066598359.1\|3878259_3879231_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369195
NZ_CP016282.1\|WP_066598362.1\|3881345_3882206_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381314
NZ_CP016282.1\|WP_066598363.1\|3882300_3882603_+\|monooxygenase	unknown	unknown	gnl\|CDD\|224278
NZ_CP016282.1\|WP_066598347.1\|3862749_3864042_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|274819
NZ_CP016282.1\|WP_066598358.1\|3877172_3878105_+\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_CP016282.1\|WP_167550865.1\|3869412_3870453_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP016282.1\|WP_066598346.1\|3861453_3862737_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|274819
NZ_CP016282.1\|WP_066598349.1\|3865182_3865821_+\|UTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|369472
NZ_CP016282.1\|WP_066598355.1\|3873733_3875035_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|274819
NZ_CP016282.1\|WP_066598350.1\|3866044_3867682_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173877
NZ_CP016282.1\|WP_066598351.1\|3867732_3868605_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP016282.1\|WP_066598360.1\|3879347_3880319_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NZ_CP016282.1\|WP_066598357.1\|3876540_3877104_+\|deaminase	unknown	unknown	gnl\|CDD\|334719

Protein	Function_ID	Function_description	E-value
NZ_CP016282.1\|WP_066598354.1\|3872026_3873613_-\|carboxylesterase-family-protein	gnl\|CDD\|365897	pfam00135, COesterase, Carboxylesterase family.	1.6601e-85
NZ_CP016282.1\|WP_157109281.1\|3864304_3865186_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	3.68426e-19
NZ_CP016282.1\|WP_066598356.1\|3875035_3876322_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	2.08363e-145
NZ_CP016282.1\|WP_066598352.1\|3868601_3869420_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.358e-81
NZ_CP016282.1\|WP_066598361.1\|3880312_3881317_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187575	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1. Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	7.67903e-82
NZ_CP016282.1\|WP_066598345.1\|3859971_3860610_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	3.23196e-34
NZ_CP016282.1\|WP_066598353.1\|3870452_3871364_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.45424e-57
NZ_CP016282.1\|WP_066598359.1\|3878259_3879231_+\|hypothetical-protein	gnl\|CDD\|369195	pfam07070, Spo0M, SpoOM protein. This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis.Spo0M exerts certain negative effects on sporulation and its gene expression is controlled by sigmaH.	0.00560887
NZ_CP016282.1\|WP_066598362.1\|3881345_3882206_+\|aldo/keto-reductase	gnl\|CDD\|381314	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR). Xylella fastidiosa phenylacetaldehyde dehydrogenase is a founding member of aldo-keto reductase family 13 member B1 (AKR13B1). phenylacetaldehyde dehydrogenase (EC 1.2.1.39) catalyzes the NAD+-dependent oxidation of phenylactealdehyde to phenylacetic acid.	2.86636e-100
NZ_CP016282.1\|WP_066598363.1\|3882300_3882603_+\|monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	9.04343e-07
NZ_CP016282.1\|WP_066598347.1\|3862749_3864042_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	7.21093e-146
NZ_CP016282.1\|WP_066598358.1\|3877172_3878105_+\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	3.67728e-67
NZ_CP016282.1\|WP_167550865.1\|3869412_3870453_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.89754e-59
NZ_CP016282.1\|WP_066598346.1\|3861453_3862737_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	2.91286e-137
NZ_CP016282.1\|WP_066598349.1\|3865182_3865821_+\|UTRA-domain-containing-protein	gnl\|CDD\|369472	pfam07702, UTRA, UTRA domain. The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to pfam04345. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.	2.32399e-07
NZ_CP016282.1\|WP_066598355.1\|3873733_3875035_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	6.02771e-135
NZ_CP016282.1\|WP_066598350.1\|3866044_3867682_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173877	cd08512, PBP2_NikA_DppA_OppA_like_7, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	7.88338e-97
NZ_CP016282.1\|WP_066598351.1\|3867732_3868605_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.42921e-90
NZ_CP016282.1\|WP_066598360.1\|3879347_3880319_+\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	8.34222e-171
NZ_CP016282.1\|WP_066598357.1\|3876540_3877104_+\|deaminase	gnl\|CDD\|334719	pfam01872, RibD_C, RibD C-terminal domain. The function of this domain is not known, but it is thought to be involved in riboflavin biosynthesis. This domain is found in the C-terminus of RibD/RibG, in combination with pfam00383, as well as in isolation in some archaebacterial proteins. This family appears to be related to pfam00186.	9.01579e-19

>NZ_CP016282.1|WP_066598353.1|3870452_3871364_+|ABC-transporter-permease
MTALAPRTAPRSVADIRAERRRYAAKLPRRKVRISLLLPALIIVAIAIFVPPLTAFDPIQTSGPASTAPNGTHWFGTDSASLDIFARTVAAARYNLSIAFAATVLCTAIGVVFGVVIGSLESERSVGGLAARGTTRLFDLLQAIPGILIGLVIVTFFGASITSLAVGTAIILAPVQMRLVRIEVLRVRKEAYLDAARMSGQTELQLMLRHVMPNSVWVALENMSFLFAASMLLTAALGFVGVGLQPPTPEWGSMLSSATNDALSGRWWPAAFPAAALMITVWAFANASHALFGRPEGASAGGH
>NZ_CP016282.1|WP_167550865.1|3869412_3870453_+|ABC-transporter-permease
MPEFLARQRWWFTRLLMLPVHLLVFTIITFLLLRMVPGDPVIGVLGANYTDEAYLAMQKSLGLDGTVWQQLGNYVANLAQLNLGQSISTGEPVIVSLMDRLPGTLELAVQGLLLTIIVSVLLSHLAVFHPRNILAKAVLVYSRAAGALPEFVLAIVALFVFYAVLHWAPAPLGRLDTGLPQQTRITGFPFLDTIIQGYWVGTFSMAQHLVLPLIVMVIAQSAVVIKLLVSGLQGAISDPATSFRITTGSGRTATTLSIYRRAAPAVVTLVGQMFGYLVGGTIVIESLFGFAGVGSLAVKAVITTDYPAIQGFLLVIAAITLIVYMLVDLTVMIIDPRRRPGAVGSN
>NZ_CP016282.1|WP_066598352.1|3868601_3869420_+|ATP-binding-cassette-domain-containing-protein
MNTAEFVLENVVKRFGSKHGHVAVDRVSTRFSNTQAVGIIGESGSGKSTLGRMLCGLENPTSGSIRFNGEELADIRRSRPRLEEFRREVQLIGQDTTSSFDPRHSLRESIMYPAMNLGGLNRRDAYEKTDEVLLQLGLAPAMADRAAGSVSGGQRQRFAIARALIVEPRILVCDEVVSALDVSVQGGILNFLKTFSRTRAAGIIFISHGLPATAFISQELMVMYQGGIVENGPTREVVTNPAHDYTKKLLAGYHNTGDADAHQYPEKETHVA
>NZ_CP016282.1|WP_066598351.1|3867732_3868605_+|ABC-transporter-ATP-binding-protein
MSSTAPLLEVAGLTIHYPGQDTNAVDDVSFTIGQGEIVALVGESGSGKSTLARGVAGLLTDPAIGVTATVLRFDGAPIERNVGAVLPSRVPGVTMMFQDASTSLDVVWTVEEQLLAILRNTERMSKKAARARARDWLDRVGLADTDRVMAARPYELSGGMRQRVMLALALAGSPRLLIADEPTSALDASLSRLSMQLLTSLSSELDTALLIVSHDIAMCTEFSDRTLVMYHGAIVDRGASATLAQTVVHPYAQGLLACVPSFEHLDDDELPTLDSFMNGPSAQSAREATS
>NZ_CP016282.1|WP_066598350.1|3866044_3867682_+|ABC-transporter-substrate-binding-protein
MSSFRKRLLSATAVALSVGLLATGCSNLAPSTEGASGGTVVVVVPELSTQLSFDTSYAITASYFDTSLALNATLIRKPYIDSEQAGTTEQDLYNFEGVLAKDYTVSEDGLTYTFNLREGIMSEMGNELTSEDVVWSYQRKFGAPTSIVPYVTAPAIVSADQFVATDKYTVTVTVEKPAYGFTLLSTMADITGDIYDSTYLKENATDEDPWATEFTSGRYDFGFGAYTVESVDPGSEMVLVANENYALGTPEITKIIQRVVPDAGNRAQALKNGDADVALGLLAADLNSLETDDAVLVPSKPRNGYLVFSLNTKLAPFDDLAVRKAFTSAIDYDQIMSEVYQGRAVKKNTMLSTDAPGYDGEGLPDWEYDPEASKAALEAAGYTDTVPVTISVSNENQSISDLAVSIKSSALAAGFDVTVEALPATQMQEKAAGGQVQATIGNGEAISLTPSYQLQLLTTPGSSSNYAQWDSPTFQALVAAGDAVADPLSDEGGKAWNAAEKYWLTEEVPHIFLGQTGSDSAVASTLTGWTWRTDHAVDLSVMTKD
>NZ_CP016282.1|WP_066598349.1|3865182_3865821_+|UTRA-domain-containing-protein
MSAALGWDAGTGDGMPKQPQLIAQNAQTMLEGWRDAAPLMVPGNTVHRIALDQHPERRGGSIDQPDAEIVRMRLVEHALVAPSPLIKALMHTDEFAVSMLEQLGSIGDQPLFVRVSYHLVGDFEATARRLRTPSQAGATMTTEESFRLHFGVDLLSNDVSVEAVRSDRRTATAMRVSVGAPMILRQMLLTDEHGWVRELSFTHFRADRVTLE
>NZ_CP016282.1|WP_157109281.1|3864304_3865186_+|GntR-family-transcriptional-regulator
MSFTHNELRAVEFQRQRLLSQPTLHTSSRRTYEQLRASIRAGLTHPDTQFRELTISQEFGASRNSVRVALAMLAADGLITRGPRRGTILTKQIIDFPVDRVLPRSFDVNPSTATHGMIVLDLESAVLTTPPLIAELLDTRVERIVSYEQMAIFDGEPVYVRSGVSPLVSDADEYFARIASCNAAVAAITDTAAGTDAAPGAPGGDRTAAGIEMEGVFELLFEVPFGHCRSRVEVVGADEHLAKLLGVEEGSPLLLRQQVNYDIHNVAREFSFTHYRGDRATLTSRRVYERGAA
>NZ_CP016282.1|WP_066598347.1|3862749_3864042_-|NtaA/DmoA-family-FMN-dependent-monooxygenase
MFHMGWFMGTGFGVYNWNQRWSGNVSQDVGNPQLFVDMATSLERAGFSYMMLEDSSVLPNVHRGTFESSVKNGGTIRFDPVPLIPFLTAATKHIGIVATISTSFYHPFMAARLFSTLDHVTNGRVGMNLVTSSNKSAMQNYGLKDLIPHDERYARANEWVDVVKALWDSWDEDAVLMDEVNGVFADHTKVHTVDFEGKYYRSRGPLNTIPGPQRHPVICQAGGSDVGREFGARNADTIIAAVKGVEEMKAYRDDVSERMIALGRDPKDVKVLFLISPVLADSKAEAEEKNAAMLKASAANIDAQVAGFSYFTSTDWSKYDYDAPFPDLSKNEGHQSTMNDFARSGATIREAVTNHRTQESVPLIGTPESIAEEMGEYMEYAGGDGFLIAKPVTRQNITEIADGLAPALRKRGLIRPSYEHSTFRDNLLAY
>NZ_CP016282.1|WP_066598346.1|3861453_3862737_-|NtaA/DmoA-family-FMN-dependent-monooxygenase
MFHLGWFLSFSTQAWHAPHSDRGGLFPNTDVYVDFARALERAGFDYLMIEDGSFIPDAYGSSMEHSLRTGFASPKHDPMALVPLLAASTEKIGLIATMTTSFYPPFLAARLMTTLDHLSGGRVGFNLVTAHNDRTAQNYGMDKHWDHSERYAIATDWAQAVTALLTSWDEDAVVDDVAAGIYADHTKIHQTDYEGSYFSSRGPLNVPPGPQRIPVICQAGGSPVGRVFASRFADTIVAPSGSIEWMKQYRTDIRAGLVDAGRDPDAVKVLFLTDFIIGDTHEDALELQRRRHAAMVADIEGRLAYMSFASGIDFSTFDLDAPVPPVSTNAAKTTTAQMFAGREHQTLREIASTIIPSLEIVGSPATAADQMEAVMAEVGGDGFLVNSPVTPRAVADIAGDLAPELRRRGLIRSEYSADTLRGNLTAY
>NZ_CP016282.1|WP_066598345.1|3859971_3860610_+|polysaccharide-deacetylase-family-protein
MTDTGAPRPHTTNLYSFDPAARTVAWTIDDGTNAESIRRLALFAAATGVRMTLFPCGSYPGWAEHAALWRPLVASGQVQVGNHTWSHRELTTLTDEEIIEELTLNEEFFLEHYGVSTKPYFRPPNGSRDERTDAVAERAGYSVQAMWSGLLTEGPDRTAEELIESAGREFRAGAIVIGHVNFDAVQDALPALMDAITTAGLTPVTLRDVFAA
>NZ_CP016282.1|WP_066598354.1|3872026_3873613_-|carboxylesterase-family-protein
MDTVDVSTTAGVVRGRQRFGSAAFLGIPYAAAPVGELRFAAPVPHPPWPGVLDAGSPGATPQRIDGGDTTLVPEPSFPGESTLNVSVFTPDPTTSAEGAGLPVLVYIHGGGYTSGSAASPWYDGAGFNRHGVVTVNVSYRLGFDGFGWIEDAPLNRGVLDWLLALEWVQRNIRFFGGDPARVTIAGQSAGGGAVLTLLGSPRAQPLFARAIVISGVATHLTPDQAEQIGRRVAELAGVAPTRAGLGALTEQQILAEQPRATALPADGPAGPLGEIANTLVGGLPFGPVIDGDLVPLATGAAVRAGIGADKPLMLGSTDHEFNFAMNDLTDELAGEDAAEMLVRLGVAGPAARAYAAAHDGRGTADILGQFASDRAIRGVMLQVAEARTAVAADRAAAASVTLGVAASVGVAVGRAADAAPTWLWAFAWRSPTFGGALHCLDLPFFFDALDAPRVEVLAGPAPSQRLADEVHGNAVDFIAGGDPTWPAWTAGEPVEGQPVIRYDAAPAGPTEVTTVAATYAGAALAFAG
>NZ_CP016282.1|WP_066598355.1|3873733_3875035_-|NtaA/DmoA-family-FMN-dependent-monooxygenase
MFHMGWFLGFGFGSYGWNQQWSGNAAADLANPQLFVDLATSLERAGFDYMMLEDSSVIPDTFRGTMEESLRAGIVRMDPMPLIPLLAAATQHLGLVATAATTFYPPFLAARLLTTLDHLSHGRVGVNLVTASPDAAAQNYGLAKHYEHDLRYRMADEWVQAVTALWDTWEPGALTLDEESGMFADHTKVHRADFDGEFYKTRGPLNTVPSPQGHPIICQAGGSPAGMDFGAKHADTILASVAGADGMKRYRDDISRRMIGFGRDPKDVKVLFLVEPVLADTDADAIEKKRRMDAANQGNIEASLMRMSYISGLDWSKFALNEEIPDLTGKHNGHQSVVDDFLAASAGKTLREALASQRRGTSSVQLVGSPDTVAGQMDEAMQEAGGDGFLVALPVTRKNITEVCDGLAPALRRRGLIREEYLPGTFRDNLFAF
>NZ_CP016282.1|WP_066598356.1|3875035_3876322_-|NtaA/DmoA-family-FMN-dependent-monooxygenase
MFHMGWFLNYTLPGWGKDWSGEAARDWTSPDLYIELARAMERARFDYMMLEDGAFIPDAYQGTAEYYLAKANHAPKHDPAILVPLIMQATRHLGVIMTIATPYYPPFAAARLMASLDHLSHGRAGINLVTAHNVRTAQNFGRDVHFEHDLRYEMADEWIDLVKQLWASWEPDAVVADHEAGIYADHTKVHPVNFEGRFYKSRGPLNTIPSPQGSPVVCQAGGSPAGRDLAARHADTVVASVPGIAAMKEYRADMTERLVRFGRDPKDLKILFTISPVFGETHDEAVAKKKRIDATTVEDALARLSWTSGIDFSQFDLDAPLPTIKTDAASSTTLGMLQGSDPTTTLRQIAERPVRLGSLEVSGTVEEVADAMEEAMDEVGGDGFLIAGQLSRRYISEVTDGLAPVLRRRGLIRSEYTGATLRDNLREF
>NZ_CP016282.1|WP_066598357.1|3876540_3877104_+|deaminase
MGILICTGITSLDGYVADEKGNFDWSVPSEEVHTFVNDLERSVGTYLYGRRLYEVMVAWETMHLNDDDQPAVMRDYTAIWQAADKIVYSSTLAEVSSRRTRIERSFDPEAVRELKRTATGNLSVGGPNLAAQAFAAGLVDEVQLFVSPVVVGGGTRFLPDHLSLSLELKDEYSFRNGVVYLGYRVRR
>NZ_CP016282.1|WP_066598358.1|3877172_3878105_+|carbohydrate-kinase
MTPDHSFPATTRALVIGEALIDIVRRPGAEPVSHAGGSPMNVAYGLGRLGVPTTLVTQIGADPFGDLIARHLRAAGVDLLPGSVTASATSSATAILDATGAATYDFDLRWELPELSLPAPCTLIHTGSIAAILQPGARAVLSAFTSAPAGTLLSYDPNVRPGIMGSRDEVVRAVEELAVAAHVVKMSDEDAAWLYPGRDLDQITRDYVAAGVALVAITRGGDGAILRAGGATAELAAHPVAVIDTIGAGDSFMSGLLYAILAGGTTEAVLQNTLDATDLGRLGQTALASAAVTVSRAGANPPTVAELAAC
>NZ_CP016282.1|WP_066598359.1|3878259_3879231_+|hypothetical-protein
MVVTTTDTAVQVSVELTPSDGVVIEGSSLGVTIRITALRSAMIDHAEISLIRKVNYTYGRGNIYGGVFPARERSTEVLAAVTVPPPGAIPAGQSRVLTGSLNIPGDGPASVRGDLIDVGWSVRCVLRAAGGQIIKRERLIDVQSWGQTSATDIGHPPVGENLGHVALEFIALSSRVLEPGTPLTGVLRLRAHDAVATRGVRVQLVRCEEVWGGPGQEANPDASESEGYRHSEAVMAAVTLAPAGTLTPGTVVDLPFAVETPAGLPAPSLSIGNLHVRWEIRSVVDLPLRLDPRLSLDLLAVTATRQPTAHPAEHPRSGSLDTD
>NZ_CP016282.1|WP_066598360.1|3879347_3880319_+|aldo/keto-reductase
MEYTHLGRSGLSVSRLCLGTMNFGPETDEPTSFGIMDAARAAGINFFDTANVYGSKLSRGATESILGRWFAQGGARREDTVLATKVFGTMSDRPNDGKLSALNIRRSLDESLKRLQTDHIDLFQFHHVDRDTPWDEIWQAMETAVAQGKILYAGSSNFAGWHIATAQAEARKRNFTGLVSEQSLYNLLKRDIEREVIPAAQANGMGILPWSPLEGGLLGGVLRKERDGSRRASGANAEKLEKNRDAIGAYEDFAAELGTEPGDLGLAWLMHQKAVTAPIIGPRTMDQLEAGLRAVDVKLDQAALTRLDEIFPGYKTAPEDYAW
>NZ_CP016282.1|WP_066598361.1|3880312_3881317_+|NAD-dependent-epimerase/dehydratase-family-protein
MVSATLSVLFIGGSGVISAAAAELAVARGHRLTVLNRGQSDLQAVPAAAELLTADVRDAAAVRAALGERHFDVVVDFVAFTPEHVRADIEQFTDRCGQYVFISSASAYQKPPAALPIRESTPLHNPHWQYSRDKIACENVLLDAYRDQGFPVTIIRPSHTYDRTQITLLNGWTDIHRMRTGQPVVVHGDGTSLWTLTHSTDFAKALVGLFGRSQALGDSFTITSDEYLPWDALYAEYARAAGAPAPEIVHVASDTMAAENPEWSGPLLGDRSHSVIFDNTKVKALVPDFVCTTPVALGFREAIAWYDAHPEQQVVDAALNATLDRLVSAHSTRS
>NZ_CP016282.1|WP_066598362.1|3881345_3882206_+|aldo/keto-reductase
MKTRQLGDRTVSSIGLGGMPMSIEGRPDEARSIATIHAALEEGVTLIDTADAYHLHADEVGHNESLIARALASWGGDTSQVVVATKGGHLRPGDGSWYVDGRPEYLKEAAKASLQRLGGDAIDLYHHHRPDPAVPYADSIGAIRDLLDEGAIRLAGISNANPEQIREAYEILGGRLASVQNQYSPAFRSSQPELDLCTELEVAFLSWSPLGGIKSAADLGTRFAPFQQVADARGVSPQVVTLAWHLAASPRVIPIPGASRPESIRNSAQAADLVLTAEELAALNAA
>NZ_CP016282.1|WP_066598363.1|3882300_3882603_+|monooxygenase
MTATVHLTLQLDPNALDRAAAVLTETLTATRAWPGNEGLEVIVDDADATHVIVVESWASAADHAAYAEWRTTPEGVNRLGEILAAPPVKTVFSERIPLGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	773142-773160	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	773394-773412	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	1364506-1364524	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	1364702-1364720	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	1850891-1850909	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3311867-3311885	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3649387-3649405	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3871640-3871658	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3871772-3871790	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3871905-3871923	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	154409-154427	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	154439-154457	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	154469-154487	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	409188-409206	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	445868-445886	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	446170-446188	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	446321-446339	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	485597-485615	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	485713-485731	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	485765-485783	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	485817-485835	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	485933-485951	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	485985-486003	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	486101-486119	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	486153-486171	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	486269-486287	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	486321-486339	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	486437-486455	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	579425-579443	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	579513-579531	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	666517-666535	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	1971420-1971438	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	1971606-1971624	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	1971802-1971820	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2769475-2769493	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2769567-2769585	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2973769-2973787	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3561237-3561255	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	4052921-4052939	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	4059150-4059168	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	4059203-4059221	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	341827-341845	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	524276-524294	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	524373-524391	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	524470-524488	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2977951-2977969	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2978004-2978022	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3134421-3134439	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	16721-16739	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	167160-167178	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	167356-167374	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	167498-167516	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	415483-415501	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	467580-467598	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	773327-773345	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	773524-773542	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	1364830-1364848	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2053528-2053546	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2131214-2131232	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2769521-2769539	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2949909-2949927	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2986344-2986362	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2986605-2986623	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	2994761-2994779	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3248693-3248711	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	3257568-3257586	1	0.947
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	330136-330154	2	0.895
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	467655-467673	2	0.895
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	4168521-4168539	2	0.895
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	154379-154397	2	0.895
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP016282.1	980155-980173	2	0.895
NZ_CP016282_6	6.2\|2606485\|19\|NZ_CP016282\|CRISPRCasFinder	2606485-2606503	19	NZ_CP016282.1	1850937-1850955	2	0.895
NZ_CP016282_6	6.2\|2606485\|19\|NZ_CP016282\|CRISPRCasFinder	2606485-2606503	19	NZ_CP016283.1	31112-31130	2	0.895

1. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 773142-773160, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

2. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 773394-773412, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

3. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 1364506-1364524, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

4. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 1364702-1364720, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

5. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 1850891-1850909, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

6. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3311867-3311885, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

7. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3649387-3649405, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

8. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3871640-3871658, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

9. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3871772-3871790, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

10. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3871905-3871923, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

11. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 154409-154427, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

12. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 154439-154457, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

13. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 154469-154487, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

14. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 409188-409206, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

15. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 445868-445886, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

16. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 446170-446188, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

17. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 446321-446339, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

18. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 485597-485615, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

19. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 485713-485731, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

20. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 485765-485783, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

21. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 485817-485835, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

22. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 485933-485951, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

23. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 485985-486003, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

24. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 486101-486119, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

25. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 486153-486171, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

26. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 486269-486287, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

27. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 486321-486339, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

28. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 486437-486455, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

29. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 579425-579443, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

30. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 579513-579531, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

31. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 666517-666535, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

32. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 1971420-1971438, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

33. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 1971606-1971624, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

34. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 1971802-1971820, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

35. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2769475-2769493, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

36. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2769567-2769585, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

37. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2973769-2973787, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

38. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3561237-3561255, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

39. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 4052921-4052939, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

40. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 4059150-4059168, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

41. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 4059203-4059221, mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

42. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 341827-341845, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

43. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 524276-524294, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgatcac	Protospacer
***************.***

44. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 524373-524391, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgatcac	Protospacer
***************.***

45. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 524470-524488, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgatcac	Protospacer
***************.***

46. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2977951-2977969, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

47. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2978004-2978022, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

48. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3134421-3134439, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgatcac	Protospacer
***************.***

49. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 16721-16739, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

50. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 167160-167178, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

51. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 167356-167374, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

52. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 167498-167516, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

53. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 415483-415501, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgatcac	Protospacer
***************.***

54. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 467580-467598, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

55. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 773327-773345, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

56. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 773524-773542, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

57. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 1364830-1364848, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

58. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2053528-2053546, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

59. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2131214-2131232, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgagcac	Protospacer
*************** ***

60. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2769521-2769539, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagttcgaccac	Protospacer
**********.********

61. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2949909-2949927, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgatcac	Protospacer
***************.***

62. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2986344-2986362, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

63. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2986605-2986623, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

64. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 2994761-2994779, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgaccac	Protospacer
********.**********

65. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3248693-3248711, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgatcac	Protospacer
***************.***

66. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 3257568-3257586, mismatch: 1, identity: 0.947

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgatcac	Protospacer
***************.***

67. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 330136-330154, mismatch: 2, identity: 0.895

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaggctcgatcac	Protospacer
********.******.***

68. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 467655-467673, mismatch: 2, identity: 0.895

tctcgacaagctcgaccac	CRISPR spacer
tctcgaccggctcgaccac	Protospacer
******* .**********

69. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 4168521-4168539, mismatch: 2, identity: 0.895

tctcgacaagctcgaccac	CRISPR spacer
tctcgacgagatcgaccac	Protospacer
*******.** ********

70. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 154379-154397, mismatch: 2, identity: 0.895

tctcgacaagctcgaccac	CRISPR spacer
tctcgactggctcgaccac	Protospacer
******* .**********

71. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to position: 980155-980173, mismatch: 2, identity: 0.895

tctcgacaagctcgaccac	CRISPR spacer
tctcgactggctcgaccac	Protospacer
******* .**********

72. spacer 6.2|2606485|19|NZ_CP016282|CRISPRCasFinder matches to position: 1850937-1850955, mismatch: 2, identity: 0.895

tcaccgcctgcttgatcag	CRISPR spacer
tctcggcctgcttgatcag	Protospacer
** * **************

73. spacer 6.2|2606485|19|NZ_CP016282|CRISPRCasFinder matches to position: 31112-31130, mismatch: 2, identity: 0.895

tcaccgcctgcttgatcag	CRISPR spacer
tcagcacctgcttgatcag	Protospacer
*** *.*************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	628403-628421	0	1.0
NZ_CP016282_6	6.1\|2606439\|19\|NZ_CP016282\|CRISPRCasFinder	2606439-2606457	19	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	340283-340301	0	1.0
NZ_CP016282_6	6.2\|2606485\|19\|NZ_CP016282\|CRISPRCasFinder	2606485-2606503	19	NC_004320	Corynebacterium efficiens YS-314 plasmid pCE3, complete sequence	16019-16037	0	1.0
NZ_CP016282_5	5.1\|2108078\|21\|NZ_CP016282\|CRISPRCasFinder	2108078-2108098	21	NZ_CP044332	Methylocystis parvus strain BRCS2 plasmid unnamed1, complete sequence	235223-235243	1	0.952
NZ_CP016282_2	2.1\|545121\|28\|NZ_CP016282\|CRISPRCasFinder	545121-545148	28	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	90145-90172	3	0.893
NZ_CP016282_10	10.1\|3871412\|24\|NZ_CP016282\|CRISPRCasFinder	3871412-3871435	24	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	743693-743716	3	0.875
NZ_CP016282_2	2.1\|545121\|28\|NZ_CP016282\|CRISPRCasFinder	545121-545148	28	NZ_CP033072	Streptomyces sp. Z022 plasmid unnamed1	59800-59827	6	0.786
NZ_CP016282_2	2.1\|545121\|28\|NZ_CP016282\|CRISPRCasFinder	545121-545148	28	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	204200-204227	6	0.786

1. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

2. spacer 6.1|2606439|19|NZ_CP016282|CRISPRCasFinder matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tctcgacaagctcgaccac	CRISPR spacer
tctcgacaagctcgaccac	Protospacer
*******************

3. spacer 6.2|2606485|19|NZ_CP016282|CRISPRCasFinder matches to NC_004320 (Corynebacterium efficiens YS-314 plasmid pCE3, complete sequence) position: , mismatch: 0, identity: 1.0

tcaccgcctgcttgatcag	CRISPR spacer
tcaccgcctgcttgatcag	Protospacer
*******************

4. spacer 5.1|2108078|21|NZ_CP016282|CRISPRCasFinder matches to NZ_CP044332 (Methylocystis parvus strain BRCS2 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.952

tcaggcgcctgcgcgacgggc	CRISPR spacer
tcaggcgcctgcgcgacggcc	Protospacer
******************* *

5. spacer 2.1|545121|28|NZ_CP016282|CRISPRCasFinder matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 3, identity: 0.893

cgcga-cccaacccgcccaccgcgcaccc	CRISPR spacer
-gcgaccccaacccgccgaccccgcaccc	Protospacer
 **** *********** *** *******

6. spacer 10.1|3871412|24|NZ_CP016282|CRISPRCasFinder matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 3, identity: 0.875

gcgaccaacccgaaaaacgcaccc	CRISPR spacer
ccgaccaatccgaaaaatgcaccc	Protospacer
 *******.********.******

7. spacer 2.1|545121|28|NZ_CP016282|CRISPRCasFinder matches to NZ_CP033072 (Streptomyces sp. Z022 plasmid unnamed1) position: , mismatch: 6, identity: 0.786

cgcgacccaacccgcccaccgcgcaccc	CRISPR spacer
ccacgcccagcccgcccaccccgcaccc	Protospacer
*   .****.********** *******

8. spacer 2.1|545121|28|NZ_CP016282|CRISPRCasFinder matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 6, identity: 0.786

cgcgacccaacccgcccaccgcgcaccc	CRISPR spacer
ggccaccgaacccgcccaccgcgccctg	Protospacer
 ** *** **************** *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2241806 : 2251240

Kaumoebavirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066595975.1\|2241806_2242853_-	DNA glycosylase	A0A1V0CNR6	Kaumoebavirus	8.1e-11	29.3
WP_066595984.1\|2242920_2243409_-	ribose-5-phosphate isomerase	A0A222YX14	Synechococcus_phage	2.2e-06	31.2
WP_066595992.1\|2243465_2244092_-	disulfide bond formation protein DsbA	NA	NA	NA	NA
WP_084020957.1\|2244376_2245954_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.1e-48	29.6
WP_084020959.1\|2246096_2247659_+	SDR family NAD(P)-dependent oxidoreductase	A0A1V0SKJ3	Klosneuvirus	1.4e-30	28.8
WP_066595995.1\|2247827_2248541_+	hypothetical protein	U5PTC5	Clavibacter_phage	9.7e-48	46.8
WP_066595998.1\|2248696_2251240_+	aminopeptidase N	A0A2K9L1R3	Tupanvirus	1.3e-38	30.6

DBSCAN-SWA_2

3482799 : 3491214

Pandoravirus(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066597963.1\|3482799_3483606_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	5.5e-23	32.1
WP_084021228.1\|3483619_3484282_-	GTP cyclohydrolase I	E7DN69	Pneumococcus_phage	4.0e-32	43.3
WP_066600122.1\|3484199_3486212_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	G8DDJ2	Micromonas_pusilla_virus	2.9e-105	43.3
WP_066597968.1\|3486295_3486856_-	hypoxanthine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	2.4e-09	30.8
WP_066597970.1\|3486842_3487874_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_066597972.1\|3487919_3488411_+	inorganic diphosphatase	A0A1B1ISK6	uncultured_Mediterranean_phage	2.1e-30	45.9
WP_066600124.1\|3488483_3489797_-	C40 family peptidase	B5LJD6	Mycobacterium_phage	1.7e-13	39.1
WP_066600126.1\|3489852_3491214_-	M23 family metallopeptidase	A8ATH6	Listeria_phage	4.0e-10	41.7

DBSCAN-SWA_3

3944598 : 3951117

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066598426.1\|3944598_3945480_+	hypothetical protein	R4JM81	Mycobacterium_phage	7.8e-07	29.5
WP_066598427.1\|3945472_3945940_+	hypothetical protein	NA	NA	NA	NA
WP_066598428.1\|3945936_3946254_+	hypothetical protein	NA	NA	NA	NA
WP_066598429.1\|3946237_3946705_+	hypothetical protein	NA	NA	NA	NA
WP_084021299.1\|3946968_3947403_+	HNH endonuclease	A0A0M4QZV3	Mycobacterium_phage	5.0e-07	36.8
WP_066598432.1\|3947699_3948392_+	site-specific DNA-methyltransferase	A0A2L0HJG6	Gordonia_phage	1.2e-66	58.7
WP_066598433.1\|3948495_3949293_+	hypothetical protein	A0A0U4IRC6	Gordonia_phage	1.2e-30	66.3
WP_157109289.1\|3949303_3949594_+	hypothetical protein	NA	NA	NA	NA
WP_066598435.1\|3949590_3949905_+	hypothetical protein	NA	NA	NA	NA
WP_066598436.1\|3949907_3950438_+	single-stranded DNA-binding protein	A6N1Y1	Microbacterium_phage	4.5e-50	71.1
WP_167550867.1\|3950559_3951117_+	HNH endonuclease	S5YRM1	Mycobacterium_phage	6.2e-34	58.5

DBSCAN-SWA_4

3955701 : 3963923

Streptomyces_phage(50.0%)

terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066598449.1\|3955701_3956988_+\|terminase	PBSX family phage terminase large subunit	A0A1J0MC69	Streptomyces_phage	1.2e-104	49.6
WP_066598450.1\|3957009_3958659_+\|portal	phage portal protein	A0A1J0MCN7	Streptomyces_phage	9.4e-54	32.2
WP_157109379.1\|3958769_3959255_+	methyltransferase	A0A166XZZ0	Gordonia_phage	1.6e-46	57.8
WP_167550868.1\|3959394_3959571_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_066598453.1\|3959585_3960800_+	hypothetical protein	A0A1J0MCU0	Streptomyces_phage	6.5e-36	36.7
WP_157109291.1\|3960878_3961628_+	hypothetical protein	B4UTX2	Rhizobium_phage	1.3e-05	36.4
WP_066598455.1\|3961961_3962720_+	hypothetical protein	NA	NA	NA	NA
WP_066598456.1\|3962729_3963923_+	DUF5309 family protein	A0A1D8EUC2	Propionibacterium_phage	1.3e-73	42.8