CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016073	Staphylococcus pseudintermedius strain 081661 isolate 20081661 chromosome, complete genome	1 crisprs	WYL,PrimPol,DEDDh,cas3,DinG,csa3,RT	0	0	11	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016073_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016073_1

233754-233866

Orphan

Consensus_repeat	Method
ACAAGTGAAGCTGTAAGTACAGAAGCAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016073_1

>merge|NZ_CP016073|1|233754-233866|CRISPRCasFinder
ACAAGTGAAGCTGTAAGTACAGAAGCAAGTGAATTTGTATCAGCAAGTGCGTCAACGTCAGCAAGTACGTCAGCATCAACATCAACAAGCGAAGCTGTAAGTACAGAAGCAAG

>NZ_CP016073|1|1|233754-233866|CRISPRCasFinder
ACAAGTGAAGCTGTAAGTACAGAAGCAAG	TGAATTTGTATCAGCAAGTGCGTCAACGTCAGCAAGTACGTCAGCATCAACATCA
ACAAGCGAAGCTGTAAGTACAGAAGCAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016073.1\|WP_037542146.1\|248428_249640_-\|glutaryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173840
NZ_CP016073.1\|WP_037542126.1\|212620_214525_+\|triacylglycerol-lipase	unknown	unknown	gnl\|CDD\|224001
NZ_CP016073.1\|WP_080552900.1\|234380_235604_+\|accessory-Sec-system-protein-translocase-subunit-SecY2	unknown	unknown	gnl\|CDD\|237095
NZ_CP016073.1\|WP_014612824.1\|242023_243532_+\|accessory-Sec-system-glycosyltransferase-GtfA	unknown	unknown	gnl\|CDD\|131964
NZ_CP016073.1\|WP_037542143.1\|244917_246099_-\|thiolase-family-protein	unknown	unknown	gnl\|CDD\|238383
NZ_CP016073.1\|WP_037542123.1\|207325_207859_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225253
NZ_CP016073.1\|WP_082243728.1\|227974_228232_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016073.1\|WP_037542134.1\|238697_239624_+\|accessory-Sec-system-protein-Asp3	unknown	unknown	gnl\|CDD\|163423
NZ_CP016073.1\|WP_037542145.1\|246122_248384_-\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|224170
NZ_CP016073.1\|WP_037542131.1\|235614_237180_+\|accessory-Sec-system-protein-Asp1	unknown	unknown	gnl\|CDD\|274740
NZ_CP016073.1\|WP_019169745.1\|215603_215705_-\|DUF2648-domain-containing-protein	unknown	unknown	unknown
NZ_CP016073.1\|WP_037542124.1\|211866_212361_-\|membrane-protein	unknown	unknown	gnl\|CDD\|224669
NZ_CP016073.1\|WP_037542127.1\|214976_215243_+\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|131171
NZ_CP016073.1\|WP_037542136.1\|239620_242008_+\|accessory-Sec-system-translocase-SecA2	unknown	unknown	gnl\|CDD\|163426
NZ_CP016073.1\|WP_015729747.1\|214719_214977_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_CP016073.1\|WP_037542141.1\|243524_244856_+\|accessory-Sec-system-glycosylation-chaperone-GtfB	unknown	unknown	gnl\|CDD\|274351
NZ_CP016073.1\|WP_051144716.1\|208015_211081_+\|YSIRK-signal-domain/LPXTG-anchor-domain-surface-protein	unknown	unknown	gnl\|CDD\|380149
NZ_CP016073.1\|WP_037542132.1\|237163_238708_+\|accessory-Sec-system-protein-Asp2	unknown	unknown	gnl\|CDD\|274739
NZ_CP016073.1\|WP_157980282.1\|227761_227917_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016073.1\|WP_014612817.1\|215718_217212_-\|malate-dehydrogenase-(quinone)	unknown	unknown	gnl\|CDD\|183983

Protein	Function_ID	Function_description	E-value
NZ_CP016073.1\|WP_037542146.1\|248428_249640_-\|glutaryl-CoA-dehydrogenase	gnl\|CDD\|173840	cd01151, GCD, Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.	2.40862e-94
NZ_CP016073.1\|WP_037542126.1\|212620_214525_+\|triacylglycerol-lipase	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	4.24535e-39
NZ_CP016073.1\|WP_014612817.1\|215718_217212_-\|malate-dehydrogenase-(quinone)	gnl\|CDD\|183983	PRK13339, PRK13339, malate:quinone oxidoreductase; Reviewed.	0
NZ_CP016073.1\|WP_014612824.1\|242023_243532_+\|accessory-Sec-system-glycosyltransferase-GtfA	gnl\|CDD\|131964	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. [Protein fate, Protein modification and repair].	0
NZ_CP016073.1\|WP_037542143.1\|244917_246099_-\|thiolase-family-protein	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	4.0634e-179
NZ_CP016073.1\|WP_037542123.1\|207325_207859_+\|hypothetical-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	0.000992198
NZ_CP016073.1\|WP_037542132.1\|237163_238708_+\|accessory-Sec-system-protein-Asp2	gnl\|CDD\|274739	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP016073.1\|WP_037542145.1\|246122_248384_-\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|224170	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism].	9.87779e-84
NZ_CP016073.1\|WP_037542131.1\|235614_237180_+\|accessory-Sec-system-protein-Asp1	gnl\|CDD\|274740	TIGR03713, acc_sec_asp1, accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	4.84437e-159
NZ_CP016073.1\|WP_015729747.1\|214719_214977_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	7.78948e-11
NZ_CP016073.1\|WP_037542124.1\|211866_212361_-\|membrane-protein	gnl\|CDD\|224669	COG1755, COG1755, Uncharacterized protein conserved in bacteria [Function unknown].	1.18304e-54
NZ_CP016073.1\|WP_037542127.1\|214976_215243_+\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|131171	TIGR02116, Hypothetical_protein_Rv3358/MT3466/Mb3393., toxin-antitoxin system, toxin component, Txe/YoeB family. The Axe-Txe pair in Enterococcus faecium and the homologous YefM-YoeB pair in Escherichia coli have been shown to act as an antitoxin-toxin pair. This model describes the toxin component. Nearly every example found is next to an identifiable antitoxin, as indicated by match to models TIGR01552 and/or pfam02604. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	6.94399e-20
NZ_CP016073.1\|WP_037542136.1\|239620_242008_+\|accessory-Sec-system-translocase-SecA2	gnl\|CDD\|163426	TIGR03714, Protein_translocase_subunit_SecA_2, accessory Sec system translocase SecA2. Members of this protein family are homologous to SecA and part of the accessory Sec system. This system, including both five core proteins for export and a variable number of proteins for glycosylation, operates in certain Gram-positive pathogens for the maturation and delivery of serine-rich glycoproteins such as the cell surface glycoprotein GspB in Streptococcus gordonii. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP016073.1\|WP_051144716.1\|208015_211081_+\|YSIRK-signal-domain/LPXTG-anchor-domain-surface-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	0
NZ_CP016073.1\|WP_037542141.1\|243524_244856_+\|accessory-Sec-system-glycosylation-chaperone-GtfB	gnl\|CDD\|274351	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. [Protein fate, Protein modification and repair].	0
NZ_CP016073.1\|WP_037542134.1\|238697_239624_+\|accessory-Sec-system-protein-Asp3	gnl\|CDD\|163423	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3. This protein is designated Asp3 because, along with SecY2, SecA2, and other proteins it is part of the accessory Sec system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.65522e-45
NZ_CP016073.1\|WP_080552900.1\|234380_235604_+\|accessory-Sec-system-protein-translocase-subunit-SecY2	gnl\|CDD\|237095	PRK12417, secY, preprotein translocase subunit SecY; Reviewed.	4.23828e-129

>NZ_CP016073.1|WP_082243728.1|227974_228232_-|hypothetical-protein
MCSETLIDSESINALSDSDNDVDTDAEARLESPLLNDAEVLSDTCLSCNALAESDDDFEVDADVLLETSPLIDAESLNDAFSEAN
>NZ_CP016073.1|WP_157980282.1|227761_227917_-|hypothetical-protein
MTDVTSLTEVLADVLSEAELLNDALVEFEPLVDVDSDFSIDVDVEADKLLD
>NZ_CP016073.1|WP_014612817.1|215718_217212_-|malate-dehydrogenase-(quinone)
MPTQSEPKDIVIIGAGVLSTTFASMIKDLEPEWNLKLYERLDSPGVESSNERHNAGTGHAALCELNYTVKQPDGSIDIEKAKEINEEFEISKQFWSHLVKSKNIDTPRDFINPLPHISFVRGKNNVQFLKDRYNKMKDFPMFDNIEYTEDIEVMRKWMPLMMQGRSASDIMAASKIDEGTDVNFGELTRKMAKSIEAHKNADVHYNHEVRDFNRRKDGKWEVTVVNRNTGESHVQLADYIFIGAGGGAIPLLQKTGIPESKHLGGFPITGQFLMCTNPDVIEEHGVKVYGKEPPGTPPMTVPHLDTRYINGRKALLFGPFASIGPKFLKNGSNLDLFKSVKPYNITTLLAAAVKNLPLIKYSIDQILMTKEGCMNHLRTFYPEAKDQDWELYTAGKRVQVIKDTEEYGKGYIQFGTEVVNSQDHTVIALLGESPGASTSVSVALEVLERNFAEYVPEWTPKLQEMIPSYGKSLIEDVDLMRKIRQQTSKDLELNYYE
>NZ_CP016073.1|WP_019169745.1|215603_215705_-|DUF2648-domain-containing-protein
MKKLLVVATVLTAAFVALKRYQEHVNKAPNIEY
>NZ_CP016073.1|WP_037542127.1|214976_215243_+|Txe/YoeB-family-addiction-module-toxin
MGNYSVLIKNSAKNDLKKIKKSLLKEQFSKIIEVLKINPYEASQSFEKLQPKHSARYSRRLNHQHRVVYTVDDEKREVYIFSAWSYYE
>NZ_CP016073.1|WP_015729747.1|214719_214977_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MIIKTPTNARKEFYELLKQVNDNHEPIIISGSKSENNAVIVSQEDWDGIQETLFLEYTGTMDKVRAREKDDSGYTNIDDIDWDNL
>NZ_CP016073.1|WP_037542126.1|212620_214525_+|triacylglycerol-lipase
MHKINKRNTFALRKRPMGVSSILIASGLLMFAGHDGKAAERSASQDVGVVAKQQELSLYQQKDGDEPTRHDAPTVVNHERETTKKASVDHLHTYTRSSDTTTVSKELDNEKIYGTVPPSPRVPKDQSNEATPVKTEDSHTQLTQKPELDSEFSAIENDNKEAKEQTKHAQRPESDFSVVEQQHKDKYITREVKQAPKVVEASTEDVAPTDADKRNKGVVPDSKINTPSPRLTTHSETQATSAPTITKLDKSAVENKWKHKDPIIFVHGFSGLVGDNAPKGSNYWGGTKYKMIEELRHAGYNVFEASVSAFGSNWARAAELYAYIKGGIVDYGAAHAAKYGHQRYGKTYEGILPNWHSDQKIHLVGHSMGGQTIRLLEQLLRNGDLEEMAYQKEYGGTISELFQGNQDNRITSITTIATPHDGTVASDDLGNTEIIKRLLYEYNVFAGRTGQTIDYGLKHWGLEQREGETYAEYAKRASKSPLFTSQDTALYDLTREGAKKLNARTDLNPNIYYKTYTGSATCETIFGTQIAHPYMNIAHVLTGDLIGMTENPAWRENDGLVSVISSQHPEDEAFEFVDFTAPAVKGIWQVTPTLKGWDHTDFTGKDVLDWRRSGAELQNFYHRLVEDLVRKEEV
>NZ_CP016073.1|WP_037542124.1|211866_212361_-|membrane-protein
MAFIILLIFFIIRLFSLAISIKHSKQLVQQGARAYGEKNSKWLAITHILIYVGAAIETLLNHDTWSIVNTVGLIIIVLAYLVLFHVIKTLGPIWTLKLYILPDHPIIRSGLYRVTKHPNYYLNIIPELIGVLLLTHATYTAILLIPYAYFLFVRIRQEEKLMSL
>NZ_CP016073.1|WP_051144716.1|208015_211081_+|YSIRK-signal-domain/LPXTG-anchor-domain-surface-protein
MNNKISALLTNKHSKYSIRKRTVGTASLLIGATLVFGIHAEDAKAAENTEATDAPKVDNHQVINDEQLTTPATEASATEISAPEVQSSPSGETKVAPTAEETTIDTHSETNEIETTPDAKEKLVEVAQVTPVKAPVEEDISRKQEDEKQPTSSEVEKAHTAAVSQPRSLKRAIPVAGNTTSEVNRLDRVNQNVNDLIKSDTSLTVIDADKNGTIVPAQDYIAWKSLISVDDKVNSGDHFTIKYSDTIQMYGLNPVDIRNIGDVVDRNNGETIATAVHDTTNKVITYTFTDYVDRFNSVKMNMDYSIYMDSAQIPQSKTGIEFGITVGNDTTTATADINYPQYKVVDKNSIGSAFTETVSNKGNQDDPGYYIQTIYVNPLNESLKGTKLNVQAYHPKYPNNVGQINQDVTNLKIYQVPKGYTLNQGYDINTKELNDVTETFQSKIVYGKDDMVTIDLGDITTPFVVVVNSKFEYTDSENPTLVQMATLTSANNRSAQVGNALGFTNNASGGIGKEVYKVGNYVWHDSNQNGIQELGEEGVGGVTVEVFDTATNTKVGQAVTNADGSYLITNIPNGTYRVEFSNIPDQYKVSPSNQGGDDQKDSNGLSSTITVNGKDNLSADLGIYKPTYKIGDYVWYDGTSAETDGIQNNHAAEHPIQDVIVKLYDETGTKLLQETKTNREGYYEFAGLEPNRYVVEFTNPEGYKPVKPNQGTTATDSNITESSNRVNVTIVDKDDLTIDAGYFNEVEPPKEERFNLGDKVWEDLNKDGIQNENEPGIKGVKVTLTKEDGSTVETTTDENGNYKFTELPNGKYKVVFETPEGYAATKVNVGDTALDSDGQTVEVVIDNKDDMTIDSGFHKPTPEVPEQPGEPETPTPEVPEQPGEPETPTPEVPEQPGEPEVPTPDMPEQPGEPEVPTPDMPEQPGEPEAPTPDMPEQPSEPKTPTPVLSEQPSHPSHKAITRPVSVGTQVDQTSHPTSKRKKQALPETGQSSTNEAPLLGGLLAVLGALFVVGRRKKQKNQ
>NZ_CP016073.1|WP_037542123.1|207325_207859_+|hypothetical-protein
MNQPYRLLSIYTDLIVGKAVNKTKLAREWEVSKRTIQRDIAHIRNFIYERCEWFELDNPIIYDNDQDSYFLNQNAKKLGHHQPAFLQLNKIQEQKIFVKFEVNIKVWKSFRQKFVSKICSRGDDFVIVSVYVTEKEALTISFEYLGQVKLLGPEAVKTRLIYEIAHLQSFYQSRTEE
>NZ_CP016073.1|WP_080552900.1|234380_235604_+|accessory-Sec-system-protein-translocase-subunit-SecY2
MKNNRITKIINQYEYKIFYKRIAFTILILLIYILGSKITIVDENAMRQHDSAFYKLAVSNMGGDIHQLNVFSLGLGPWLTAMIIISLITYKNMEKAMHQTRAEKHYKEKFLTLGLSIIQGYFVINQFVRHTDAERFTELLLLLILVTGAMLMMWLADQNMRYGIAGPMPIVLLSVIKSMFTQSLPIVSIEILMLVVMVILIIVALFILLLTELIEYRIHYRDIIEMPTPGQPTYLAWKINPGGSISIMISLSVFLLLTSTINLIFNMVTGKTPHLQWLSFGHYMGVTIYLILQTVLGYLLSRLIVNTKQNTKDFLKNGNYFIGIRPGADTGNYLNHLAKRLCWFGTTIVTAIIGVPLYISLLVPDLSEYIYFAVQLMIMVYLAMNITETMRTYLYFDKYGAFLNQYW
>NZ_CP016073.1|WP_037542131.1|235614_237180_+|accessory-Sec-system-protein-Asp1
MKHFIPAWYTTDDWWRSQALPFHRTLKVNEFDELISLMNIHLKNKAPFEMMVLNYSPNLRLFLHRQELFEATYWSLFDEIQGFTHQTPRPIDYRQFNWPNGTEFVHSLFLIRALTGPDMYSEIQFSQEGYLLWIETFEKGVQKNRCIFDDRGFLSSFLSCDAHGQFAEHYYMTANGDWIMKEDLLLGGVTIHPDYAHRFKYAYYDNMPALIDEYINHYKTKISSKDVIITASDVRHNPIISRHFSTQRLCFSVYQQRENALSDEGMASIKEGPYCLIDTMENERRIADCGILSSETQKRLRITPFDVRITPNVSNQLHESLIGVWIDGIDQGRLVTIVNYLINELECRPQTRVVFLTRREEYQVPEWIQAEVNRIQNFFKERHTESKVLQEFPQKGKRDSIVYASLKSVPFEIDVAEAVSTLRLVIDLNEEPDLFLQICCLGAGLPQISRMETDYVKHGRNGYVISNDADLTEGIAHFLDYLKHWNQAYAYAMKLAKAYESNEILKMLDDWLEGETHEATL
>NZ_CP016073.1|WP_037542132.1|237163_238708_+|accessory-Sec-system-protein-Asp2
MKQRYKMLQIGGDNYASHFKDRDEVSWTSMPLDSLSDLEELKKLVEEEKQFDFVFVQVPYSEMLMQAFRLVSQPYNTYVDQRFWNSFFEAEEVVRTRFIRCFSYDSEEDCIKRLMALAFSKQYGDRIHPIHCKVNPLFKGETYYEGRHQLVLKGNFGETYTPILSWNMYLYYDRYKVNEIWLEYTSSPHVEVSYTLRLYENLNMDNLIREFVLEGERLIEPFAIPSMDKDAYIFVTAKAKGEGTLKVGNIHKRWSRMEHGQFILGGQRWSGEDRGEFIHFFHPGDLKPPLNVYFSGYRTAEGFEGYYMMEKFKAPFLLISDLRLEGGGFYLGNDAFENQIKKVIQDTLEWLGFKEDEMIMSGLSMGSFGALYYGAQLNPAAIVVGKPLVNIGGIAENMRLMRPEDFGTALDILLTNERGLDDEAIERLNQKFWTTLNQNQIDQTLFAISYMEHDDYDLYAFQNLLSVLSRQGARVMSRSAPGRHNDDTPTITSWFSHFYFMIMESQFGRVRDER
>NZ_CP016073.1|WP_037542134.1|238697_239624_+|accessory-Sec-system-protein-Asp3
MSDKHPFNIRWTHVTKDTFMYGTKLKWSSTGALFENALMPSGIVIHEWKMMTDFQTDVNVPDLPILKKNCTYHFYFDYDVQPENSIYFKVIFKRRNGTTCGFQIIKTHEADVTVPEDTFSYVIQMINAASTQLMFRQITIKEARLEIHRKDGVRISSMQNPNANVARTTLIFAPKEGLDSELIKGIQNCMLVTGWDVKASTYEITHLVEMIKEKTKGYRCQLVGYDKRSNKMAKLIGSHLKATIFVTSDTDNAQENAPNIHDAQNSTIVIYQGNETVTQSCQWLDAVLNKSHQLRGLNVQRLNGGQIE
>NZ_CP016073.1|WP_037542136.1|239620_242008_+|accessory-Sec-system-translocase-SecA2
MSQSLHKTINKMRLRRLKRILKRIQQYEKPFQMLPDDVLQQKTVTFKRQLLQKETTLEAILPEAYALVREASRRVLGMFPKDVQVLGAIVLHEGNIAEMQTGEGKTLTATMPLYLNALTGKGAYLITTNDYLAKRDYMEMKPLFEWLGLSIALGFVDIPDYEYEKGEKQAIYQHDIIYTTGGRLGFDYLIDNLAESREGKFLPTLNYGIIDEVDSIILDSAQTPLVISGAPRVQSNLFQVVNTFVQTLENKRHFKMKKTKKEIWLTADGIEAANAYFGVDNIYDAPYFDLVRNINLCLRAQFLFENNMDYFVYQGEVVLIDRINGRMMHGTKLQSGLHQAIEAKENVEMSMDMSVMATITFQNLFKQFNVFAGMSATSHLGEKEFLDLYSKVVIQIPTHRPIQRIDYPDRVFKNIEDKHQAIIERVKTLYTEQRPVLLITRTAESAEYFSAALFALDIPNNLLIAQNVAKEAQMIAEAGQLRAVTVATSMAGRGTDIKLAEGVPELGGLAVIISEHMENSRIDRQLRGRSGRQGDPGTTQIYISLEDYLVKRWSDHQISRIKRLEKFDTHTLQNSRLFQKHVRKIVKRAQRLSEEQGIKVRETSNEHEKSISVQRELVYKERNRVLQFKGLEEIQLEQLALEVFEEAFEHTHFTVSEWVDYIYKNLSFQYKGQLEGVDLRDINAVTQYLLKLFKQQLAYQRQHLDDYFYTYFVQKAILKAIDSNWIKQVDHLQRLKNSVNTRQNGKRNPIFEYHKVALESFELMTDAIKKDIVKYLCQSITEKEDDRHLIVHFPN
>NZ_CP016073.1|WP_014612824.1|242023_243532_+|accessory-Sec-system-glycosyltransferase-GtfA
MTIYNINFGIGWASSGVEYAQKYRAEALRGLDVPLKFVFLDFMSSENIQTLTSNLGFQDDEVIWLYQYFTDIKIAPTTYTIDDIKSSIHEEVVREEVDGSVRWLYLEQPGSFITCYLKNEDEPYVDCAEFVINNKLVRKDYYSYTRTFSEYYAPADQKAKLYMRHYYNEDGSVVYTEYIDEGTHVYAFKDQLFYTKEEFVAYFIQNLKLTSEDIVIYDRATKVGQAMLQNKGDSKVGVVVHAEHFSENATDEDHILWNNYYEYQFTNVKEIDFYITATERQNEILSQQFKQYLNAEPPIYTVPVGSLNQLNKPASPRHAYRMVTASRLASEKHIDWLVRAASIAKKEVPELTFDIYGEGGERESIENWIEKLGAHDYIRLLGHQKLDDIYKNYPLFVAASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIRDGKNGYLVPIEVKEDSNEKIIDSLAQAIIRFFNDGPVDPHETSYAIATPYLIENTRQKWKELIEEVLHG
>NZ_CP016073.1|WP_037542141.1|243524_244856_+|accessory-Sec-system-glycosylation-chaperone-GtfB
MVNLFEYFNSDTRELYETLRISGHHDETIVLVDDGFLPEGIRSPYQFFANYQVPDKQRARYFNEVPVPRFWEIEGNNDEAWVKDMSDRRAMIYFHPSEKRRLVSHVEWLNRKGQLQYVDHYNQHGFRYAQTVYDLTGNMIFRRYLDQQGNEVIYENFVASSVILTWKGEQYHFSDSIDFYTFFLKAIDVNLENIVINSLSTPFLILYQLDIPGNDILFWQETSYGEIPGNMRVILERDTPRHCRILIPEREEYENIYAQLTDEERQFIAHSGYLYNYQSENNYTMNILTMTNSDQIENLEAIVQSCPFAHFHIGAVTEMSSKLTAFERYANVHLYQAIELDTVETVYRKCDVYLDINNGGEIINAVKKAFDFNMLILGYSDIAHNRRFTAPENLFEKEKDASALIEALKDINLKKRYFKLRLQYQQDHANETTIEAFNQIFKA
>NZ_CP016073.1|WP_037542143.1|244917_246099_-|thiolase-family-protein
MREAYIVAYGRSAVAKAKKGALFHERPDDVAAEVLKGVLNRIDGAFHPDMVEDVIVGNAFPEGLQGQNIARTIALRAGLPNSVPGQTVNRYCSSGLQTIALAANQIMAGQGDILVAGGIEFMSAVPMGGNEPTNNPTLQQQDVGASYPMGLTAENVAETYQVEREDQDAYAVQSHQRATEAQQKGKFTDEIIPIRVNKVSYDENGPRVDTEIFDTDELVRPDTHVEALSQLPTVFKADGTVTAGTSAPLSDGVGFVVLMSKEKVTALGVTPIARFVGYKAVGVDPKLMGIGPAFAIPEVLDLTHLTIDDIDLIELNEAFASQTIASMREVGLSEEKTNVNGGAIALGHPLGATGAILTARLLAEMKKRSNVRYGMVTMCIGVGMGAAGVFELV
>NZ_CP016073.1|WP_037542145.1|246122_248384_-|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein
MTIRKVTVLGAGTMGAQLAALLVNAGLKVKLLDIVIDHNDPNKISKAAYDKITHPKKPLLFDLALAPHLTYGNFEADLANDDADLYLEAVKEDLEVKHQLWQQVAQTAKPEALFATNTSGIPIEAIAKAFGPEDKKRFFGLHFFNPPRIMKLVELIPNAETDPTLIDNVQTFTQEVLGKGVIVVNDVPGFVANRIGTQTMNDIMYRAEQQGFSITEIDALTGKIIGRPKTGTYALSDLVGLDIAVSVIRGLQQVPEEQPYFQDVKLVDTLYEAGALGRKTKQGFYKKARKQKQRLVYDVDEQDYVPLTQPELPILTTFTKDLAHNLDVIFNATDRAGQFLWETLRNNFYYAARNVPKATDDFQDIDRALVWGFNWKLGPFQLWDLMGFDRVKTRIEAELGTLPEWIQQIEDGFYGECETIDVVTPIEHQLDKILWQRKDSQLAIVNAHQLLLKLRSYNNVITDAFNDDLVEAIDMLENEPYSSMVIYADGPHFSVGANLYEMKKAYETNQIDKRIAPSIDRLHASFNRLKYSEKPIVTAIHGRVLGGGCELALHSPFIVASSETYMGLVEAGVGLLPSGGGLAEMSDRILKTTHMMNDKQASMTQLLMTVGLAKVSTNAFEAQRYGFLRPTDTIIFNQERRVQIALQRAQYEADAHYMPAAERQYLALGKDFLSLAQGQLDAQRLGHYISKHDYDIALRIATVLSGGDLPRNTYIQQRYIQQLEKVHFLELIKTEKTYDRITYMLENGKPLRN
>NZ_CP016073.1|WP_037542146.1|248428_249640_-|glutaryl-CoA-dehydrogenase
MTTDKKNTLKQLYPEDILSIAKGLTDGEVALLQQLNDLLESKYRQDINQHWVDATVPEDYFQDIGNLNYFTNPLLYQGREEAKTPSQLFQFFMSYTIARFDVSLATLLGVHQGLGHNTFLFGGSSEQVAKYVPKLQSHELRTCFALTEPNHGSDVAGGLETVAERHGDEWVINGAKKWIGGAHVSDVIPVFAVNKDTGKPHCFVVKPEQEGVEIEVLQHKIALRIVPNAEIRLNHVKVKEADRLQNITSFKDIAKILYSTRAGVAYMATGALAGTLRATLSYVKERQQFGKSISQYQLIQEKLAMIQGNLTHAMAMSAQLARMQENGEYDEVATSTAKMMNALRLRESVAMGRGITGGNGILAGEHDIARFFSDAEAIYTYEGTHEMNALVIGRALTGVSAFV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1065276 : 1086675

Staphylococcus_phage(94.74%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065354709.1\|1065276_1066680_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	5.4e-135	52.1
WP_065354710.1\|1066682_1067669_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	9.5e-78	47.6
WP_014613580.1\|1067644_1067896_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	4.6e-29	70.6
WP_014613581.1\|1067954_1068425_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	7.1e-39	53.8
WP_014613582.1\|1068429_1069182_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	3.0e-84	61.6
WP_065354711.1\|1069579_1071160_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	7.5e-242	76.2
WP_020219664.1\|1071623_1072823_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	5.2e-179	80.1
WP_014613585.1\|1072910_1073822_+	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	9.4e-88	68.3
WP_065354712.1\|1073963_1074800_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-112	69.3
WP_065354713.1\|1074901_1075249_-	fluoride efflux transporter CrcB	NA	NA	NA	NA
WP_014613589.1\|1075642_1075945_-	hypothetical protein	NA	NA	NA	NA
WP_014613590.1\|1076097_1076808_+	transaldolase	M1PR54	Cyanophage	2.0e-21	39.0
WP_065354714.1\|1076975_1077425_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	1.1e-09	36.0
WP_014613592.1\|1077427_1077859_-	hypothetical protein	NA	NA	NA	NA
WP_081378295.1\|1077861_1078347_-	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	3.8e-19	36.5
WP_014613594.1\|1078547_1078772_+	hypothetical protein	NA	NA	NA	NA
WP_014613595.1\|1078928_1079792_+	autolysin	A0A1W6JQU5	Staphylococcus_phage	4.2e-37	41.7
WP_063284446.1\|1080181_1081750_+	FAD-dependent oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	2.0e-13	60.3
WP_014613597.1\|1082206_1083253_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.4e-106	54.7
WP_014613598.1\|1083257_1083887_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	7.2e-63	59.5
WP_063278943.1\|1083900_1085082_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.1e-152	66.2
WP_015729343.1\|1085096_1085564_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	9.4e-52	64.9
WP_014613601.1\|1085688_1086675_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	2.8e-122	67.0

DBSCAN-SWA_2

1090793 : 1098578

Staphylococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014613607.1\|1090793_1091357_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	1.5e-56	56.8
WP_014613608.1\|1091353_1092307_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	6.4e-63	80.4
WP_015729341.1\|1092454_1093636_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	9.8e-138	62.5
WP_099984946.1\|1093926_1096359_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	81.7
WP_015729339.1\|1096385_1096697_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	2.2e-33	69.9
WP_063278942.1\|1097321_1098578_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.3e-31	69.5

DBSCAN-SWA_3

1221778 : 1230610

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014613720.1\|1221778_1222777_+	Holliday junction branch migration DNA helicase RuvB	E3T4M7	Cafeteria_roenbergensis_virus	8.0e-08	29.1
WP_037542836.1\|1222794_1223820_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_014613722.1\|1223837_1224977_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.2e-87	45.5
WP_014613723.1\|1224993_1225257_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	2.0e-06	42.9
WP_014613724.1\|1225398_1227678_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	7.2e-28	32.0
WP_037544195.1\|1227794_1230080_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.9e-69	29.5
WP_014613726.1\|1230091_1230610_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	8.9e-27	48.0

DBSCAN-SWA_4

1300557 : 1367022

Staphylococcus_phage(60.78%)

integrase,portal,capsid,tail,plate,tRNA,terminase,protease,holin

attL 1319949:1319966|attR 1328346:1328363

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037542856.1\|1300557_1301235_+\|tRNA	tRNA (adenine(22)-N(1))-methyltransferase TrmK	NA	NA	NA	NA
WP_037542857.1\|1301231_1302335_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_014613798.1\|1302488_1303457_-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA
WP_037542858.1\|1303637_1304972_+	DEAD/DEAH box helicase	A0A1B1IS59	uncultured_Mediterranean_phage	1.5e-49	33.1
WP_015729240.1\|1304996_1305890_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	1.7e-25	30.6
WP_014613801.1\|1306074_1306845_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.3e-21	29.6
WP_014613802.1\|1306841_1307729_+	metal ABC transporter permease	NA	NA	NA	NA
WP_014613803.1\|1307691_1308099_+	transcriptional repressor	NA	NA	NA	NA
WP_014613804.1\|1308372_1309479_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_014613806.1\|1309825_1310425_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	4.6e-59	54.2
WP_037542859.1\|1310717_1312757_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_037542860.1\|1313025_1313985_+	PstS family phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_037542861.1\|1314102_1315029_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_037542862.1\|1315031_1315910_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_014613811.1\|1315927_1316770_+	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-15	32.7
WP_014613812.1\|1316771_1317422_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_014613813.1\|1317493_1317643_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_037542863.1\|1317792_1318332_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_037542864.1\|1318350_1319790_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_014613816.1\|1319791_1319995_+	YqgQ family protein	NA	NA	NA	NA
1319949:1319966	attL	NA	NA	NA	NA
WP_014613817.1\|1319991_1320978_+	ROK family glucokinase	NA	NA	NA	NA
WP_014613818.1\|1320978_1321290_+	MTH1187 family thiamine-binding protein	NA	NA	NA	NA
WP_037542865.1\|1321302_1321932_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	3.8e-32	38.1
WP_037542866.1\|1322689_1323913_-\|integrase	site-specific integrase	A7YGM7	Staphylococcus_virus	8.7e-81	42.3
WP_015729226.1\|1323973_1324582_-	hypothetical protein	NA	NA	NA	NA
WP_015729225.1\|1324628_1325090_-	hypothetical protein	A0A223LGM3	Staphylococcus_phage	2.4e-47	60.9
WP_015729224.1\|1325103_1325415_-	helix-turn-helix transcriptional regulator	B5WZL2	Staphylococcus_phage	3.3e-29	67.0
WP_015729223.1\|1325590_1325818_+	hypothetical protein	NA	NA	NA	NA
WP_015729222.1\|1326014_1326197_+	hypothetical protein	NA	NA	NA	NA
WP_037544203.1\|1326220_1326712_-	hypothetical protein	NA	NA	NA	NA
WP_015729220.1\|1326773_1327037_+	helix-turn-helix domain-containing protein	B7T0G2	Staphylococcus_virus	1.1e-30	73.3
WP_157980229.1\|1327244_1327526_+	DUF2482 family protein	NA	NA	NA	NA
WP_037542870.1\|1327612_1327870_+	DUF1108 family protein	A0A223LGN1	Staphylococcus_phage	1.7e-15	50.6
WP_037542872.1\|1327885_1329832_+	AAA family ATPase	A0A0N9SKM4	Staphylococcus_phage	2.4e-197	54.9
1328346:1328363	attR	NA	NA	NA	NA
WP_037544205.1\|1329825_1330026_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_037542874.1\|1330039_1330954_+	recombinase RecT	A0A2I6PDH5	Staphylococcus_phage	5.4e-128	78.0
WP_065354726.1\|1330962_1331661_+	MBL fold metallo-hydrolase	A0A1Q1PW06	Staphylococcus_phage	2.2e-73	63.8
WP_037542875.1\|1331653_1332115_+	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	2.8e-48	62.8
WP_037542877.1\|1332129_1332537_+	hypothetical protein	A0A1L2JY32	Aeribacillus_phage	2.9e-17	42.6
WP_037542879.1\|1332552_1333272_+	hypothetical protein	A0A0K2CZT8	Paenibacillus_phage	5.0e-44	43.2
WP_051144727.1\|1333323_1334088_+	DnaD domain protein	A0A1Q1PVU4	Staphylococcus_phage	1.0e-55	59.7
WP_037542880.1\|1334102_1334885_+	ATP-binding protein	A0A1W6JPS4	Staphylococcus_phage	3.1e-87	60.5
WP_037542885.1\|1335403_1335655_+	hypothetical protein	NA	NA	NA	NA
WP_037542887.1\|1335657_1335882_+	hypothetical protein	A0A223LIA9	Staphylococcus_phage	2.8e-25	71.6
WP_037542889.1\|1335887_1336091_+	hypothetical protein	A0A1J0MFY5	Staphylococcus_phage	8.9e-15	68.9
WP_037542893.1\|1336343_1336634_+	hypothetical protein	NA	NA	NA	NA
WP_051144728.1\|1336634_1336955_+	hypothetical protein	NA	NA	NA	NA
WP_049770166.1\|1336917_1337490_+	hypothetical protein	B3GVZ0	Streptococcus_phage	2.0e-19	37.4
WP_037542895.1\|1337510_1337954_+	hypothetical protein	A0A217ERD3	Bacillus_phage	1.8e-23	43.5
WP_037542896.1\|1338078_1338492_+	sigma-70 family RNA polymerase sigma factor	A0A1J0MFD1	Staphylococcus_phage	2.8e-55	79.9
WP_037542898.1\|1338753_1339089_+	HNH endonuclease	D2XR61	Bacillus_phage	7.8e-24	53.6
WP_015729198.1\|1339215_1339515_+	hypothetical protein	A0A2H4JBX8	uncultured_Caudovirales_phage	2.6e-18	58.5
WP_015729197.1\|1339511_1341152_+\|terminase	terminase large subunit	A8AT95	Listeria_phage	5.6e-224	68.0
WP_037542899.1\|1341166_1342321_+\|portal	phage portal protein	A0A075M040	Staphylococcus_phage	3.4e-111	51.4
WP_037542900.1\|1342310_1343033_+\|protease	Clp protease ClpP	A0A1W6JPK0	Staphylococcus_phage	2.8e-63	50.2
WP_037542902.1\|1343061_1344189_+\|capsid	phage major capsid protein	A0A1W6JPL4	Staphylococcus_phage	6.2e-150	73.6
WP_037542904.1\|1344257_1344554_+	hypothetical protein	A0A2H4JAM0	uncultured_Caudovirales_phage	6.9e-16	42.9
WP_037542906.1\|1344534_1344897_+	hypothetical protein	A0A2I6PDD6	Staphylococcus_phage	2.8e-19	40.0
WP_037542908.1\|1344893_1345295_+	hypothetical protein	R4WAN5	Staphylococcus_phage	1.4e-51	77.4
WP_037542910.1\|1345296_1345692_+	hypothetical protein	A0A2I6PDD8	Staphylococcus_phage	2.2e-49	73.3
WP_037542920.1\|1345731_1346412_+\|tail	tail protein	Q9B0D5	Staphylococcus_virus	4.2e-85	74.5
WP_015729188.1\|1346506_1346968_+	Ig domain-containing protein	A0A1J0MFD8	Staphylococcus_phage	2.1e-35	52.0
WP_015729187.1\|1347075_1347426_+	hypothetical protein	A0A0K1LKJ0	Staphylococcus_phage	1.2e-27	57.8
WP_037542923.1\|1347636_1353225_+\|tail	phage tail tape measure protein	A0A2I6PDS2	Staphylococcus_phage	0.0e+00	53.4
WP_080552907.1\|1353314_1354052_+\|tail	phage tail family protein	I1W5Y8	Staphylococcus_phage	6.4e-87	62.6
WP_099984955.1\|1354052_1355627_+	peptidase	A0A2I6PDE4	Staphylococcus_phage	1.4e-147	49.1
WP_015729182.1\|1355613_1355814_+	hypothetical protein	A0A1J0MFL4	Staphylococcus_phage	7.4e-06	67.6
WP_015729181.1\|1355820_1356441_+	hypothetical protein	A0A1J0MFD6	Staphylococcus_phage	6.0e-70	61.0
WP_037542926.1\|1356452_1357484_+	SGNH/GDSL hydrolase family protein	A0A1J0MFI8	Staphylococcus_phage	9.1e-140	76.9
WP_037542928.1\|1357500_1358772_+\|plate	phage baseplate upper protein	A0A1J0MFQ3	Staphylococcus_phage	1.2e-205	83.0
WP_051144729.1\|1358842_1360843_+\|plate	BppU family phage baseplate upper protein	I6P9N4	Staphylococcus_phage	2.3e-118	44.6
WP_065354728.1\|1360857_1361286_+\|holin	phage holin family protein	A0A1S6KVE0	Staphylococcus_phage	7.8e-45	67.7
WP_037542932.1\|1361298_1362246_+	N-acetylmuramoyl-L-alanine amidase	A0A1P8CMK9	Staphylococcus_phage	2.0e-85	53.0
WP_015729174.1\|1362381_1362729_-	hypothetical protein	NA	NA	NA	NA
WP_015729173.1\|1362725_1362878_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_015729172.1\|1363007_1363670_+	hypothetical protein	NA	NA	NA	NA
WP_037542934.1\|1363659_1364022_+	hypothetical protein	A0A240FHV6	Streptococcus_phage	3.3e-20	41.9
WP_015729170.1\|1364081_1365233_+	hypothetical protein	A0A220GFH1	Streptococcus_phage	9.3e-109	54.2
WP_049770165.1\|1365232_1366522_+	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	1.1e-97	44.0
WP_037542938.1\|1366521_1367022_+	ParB-like nuclease domain-containing protein	L0P6I1	Lactobacillus_phage	1.8e-77	82.4

DBSCAN-SWA_5

1568659 : 1640229

Staphylococcus_virus(18.18%)

integrase,tail,portal,capsid,tRNA,head,protease

attL 1559707:1559723|attR 1627200:1627216

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1559707:1559723	attL	NA	NA	NA	NA
WP_065354732.1\|1568659_1568983_-\|head,tail	phage head-tail connector protein	B7T0D4	Staphylococcus_virus	4.7e-18	51.0
WP_065354733.1\|1569964_1570549_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_037542793.1\|1570725_1570911_-	hypothetical protein	NA	NA	NA	NA
WP_037543118.1\|1570934_1572518_-\|capsid	minor capsid protein	Q4ZE35	Staphylococcus_virus	1.6e-106	61.3
WP_120693855.1\|1572501_1573827_-\|portal	phage portal protein	A0A2P1JTZ3	Anoxybacillus_phage	8.5e-98	46.0
WP_037543121.1\|1574440_1574749_+	DUF4870 domain-containing protein	A0A2H4J741	uncultured_Caudovirales_phage	2.7e-23	52.0
WP_157980265.1\|1575724_1576054_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_020219865.1\|1576072_1576273_+\|integrase	tyrosine-type recombinase/integrase	A0A1B1P8I7	Bacillus_phage	6.5e-10	46.2
WP_020219866.1\|1576366_1577707_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_014614020.1\|1577730_1578099_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_014614021.1\|1578274_1579522_-	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_037543125.1\|1579539_1580772_-	GTPase HflX	NA	NA	NA	NA
WP_014614023.1\|1580877_1581351_+	glutathione peroxidase	NA	NA	NA	NA
WP_037543128.1\|1581377_1581632_-	hypothetical protein	NA	NA	NA	NA
WP_037543130.1\|1582107_1583061_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_037543133.1\|1583047_1584004_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_019165427.1\|1583996_1584203_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_037543137.1\|1584496_1586167_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_037543140.1\|1586293_1587796_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_014614031.1\|1588091_1588907_-	aquaporin family protein	NA	NA	NA	NA
WP_037543150.1\|1589147_1590176_-	LD-carboxypeptidase	NA	NA	NA	NA
WP_014614033.1\|1590203_1590737_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_014614036.1\|1596160_1596670_-	energy coupling factor transporter S component ThiW	NA	NA	NA	NA
WP_014614037.1\|1596724_1597102_-	hypothetical protein	NA	NA	NA	NA
WP_014614038.1\|1597102_1598653_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_014614039.1\|1598756_1599056_-	thiamine-binding protein	NA	NA	NA	NA
WP_014614040.1\|1599314_1600181_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_037543155.1\|1600181_1601942_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_014614042.1\|1602094_1602889_-	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_037543157.1\|1603219_1605394_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.8e-207	54.6
WP_037543159.1\|1605377_1605758_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	5.3e-29	57.8
WP_014614046.1\|1605955_1606174_+	hypothetical protein	NA	NA	NA	NA
WP_037543160.1\|1606296_1607856_-	ribonuclease Y	NA	NA	NA	NA
WP_014614049.1\|1608082_1609126_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.4e-124	68.5
WP_037543162.1\|1609264_1610440_-	CinA family nicotinamide mononucleotide deamidase-related protein	NA	NA	NA	NA
WP_014614051.1\|1610660_1611245_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_014614052.1\|1611286_1611682_-	transcriptional regulator	NA	NA	NA	NA
WP_014614053.1\|1611700_1612546_-	YmfK family protein	NA	NA	NA	NA
WP_037543163.1\|1612602_1613307_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_037543165.1\|1613303_1614593_-	insulinase family protein	G3MBJ8	Bacillus_virus	3.0e-15	28.4
WP_037543167.1\|1614585_1615860_-	insulinase family protein	NA	NA	NA	NA
WP_014614059.1\|1619114_1620788_-	ribonuclease J	NA	NA	NA	NA
WP_015729052.1\|1621297_1623391_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_014614062.1\|1623549_1623819_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_037543170.1\|1623919_1624891_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_037543171.1\|1624905_1625823_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_014614066.1\|1626995_1627235_-	hypothetical protein	NA	NA	NA	NA
1627200:1627216	attR	NA	NA	NA	NA
WP_015729051.1\|1627449_1629588_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	6.5e-23	24.6
WP_014614068.1\|1629604_1629910_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_014614069.1\|1629906_1630194_-	YlxR family protein	NA	NA	NA	NA
WP_014614070.1\|1630205_1631384_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_014614071.1\|1631404_1631872_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_037543173.1\|1631996_1636304_-	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	3.2e-21	37.3
WP_037543174.1\|1637220_1638924_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_015729046.1\|1638948_1640229_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA

DBSCAN-SWA_6

1852080 : 1860500

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037543346.1\|1852080_1852647_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-28	39.5
WP_037543348.1\|1852646_1853678_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	6.9e-63	42.7
WP_014614274.1\|1853681_1855103_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-50	33.4
WP_014614275.1\|1855081_1857271_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.6e-139	40.3
WP_037543352.1\|1857263_1857935_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_014614277.1\|1857936_1858197_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_037543354.1\|1858199_1858901_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	1.7e-49	44.2
WP_075773691.1\|1858897_1860070_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_014614280.1\|1860017_1860500_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.1e-21	44.9

DBSCAN-SWA_7

1920336 : 1934350

Streptococcus_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000284571.1\|1920336_1921941_+\|transposase	IS1182-like element IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.1e-128	44.4
WP_001835223.1\|1922496_1922694_+	hypothetical protein	NA	NA	NA	NA
WP_000802831.1\|1922661_1923321_-	RibD family protein	A0A1B0RXM8	Streptococcus_phage	3.1e-125	100.0
WP_072387101.1\|1923431_1923839_-	WYL domain-containing protein	A0A1B0RXM3	Streptococcus_phage	1.1e-59	98.3
WP_001079938.1\|1923811_1924384_-	HTH domain-containing protein	A0A1B0RXM1	Streptococcus_phage	5.5e-102	99.5
WP_001096887.1\|1924659_1925454_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
WP_000627290.1\|1925546_1926089_-	streptothricin N-acetyltransferase Sat4	A0A1B0RXL7	Streptococcus_phage	8.9e-94	100.0
WP_000662263.1\|1927025_1927760_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.5e-141	100.0
WP_000228166.1\|1927740_1928610_-	hypothetical protein	A0A1X9I6C9	Streptococcus_phage	4.3e-159	95.8
WP_000567888.1\|1928712_1928958_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_001038796.1\|1930251_1930989_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	2.4e-134	99.6
WP_001809736.1\|1931113_1931209_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA
WP_020220349.1\|1931257_1931491_-	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	1.0e-22	84.6
WP_065354734.1\|1931606_1933733_-	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	3.4e-266	98.0
WP_037543459.1\|1933732_1934350_-	recombinase family protein	A0A1V0E035	Clostridioides_phage	1.9e-15	36.6

DBSCAN-SWA_8

2035937 : 2112256

Staphylococcus_phage(87.1%)

integrase,tail,capsid,plate,portal,head,terminase,protease,holin

attL 2070758:2070779|attR 2109085:2109106

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037543532.1\|2035937_2036666_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_051144732.1\|2037360_2037717_-	hypothetical protein	NA	NA	NA	NA
WP_037543534.1\|2037713_2037986_-	hypothetical protein	NA	NA	NA	NA
WP_037543539.1\|2039289_2040015_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.5e-08	27.1
WP_037544260.1\|2040027_2040231_-	hypothetical protein	NA	NA	NA	NA
WP_014614409.1\|2040932_2041199_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_014614411.1\|2042571_2042832_-	DUF1871 family protein	NA	NA	NA	NA
WP_014614412.1\|2042853_2043447_-	peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	1.6e-24	40.7
WP_014614413.1\|2043520_2043901_+	kinase	NA	NA	NA	NA
WP_014614414.1\|2044027_2046445_+	Na+/H+ antiporter subunit A	NA	NA	NA	NA
WP_014614415.1\|2046407_2046854_+	Na(+)/H(+) antiporter subunit B	NA	NA	NA	NA
WP_014614416.1\|2046853_2047201_+	Na(+)/H(+) antiporter subunit C	NA	NA	NA	NA
WP_014614417.1\|2047190_2048690_+	Na+/H+ antiporter subunit D	NA	NA	NA	NA
WP_014614418.1\|2048691_2049171_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA
WP_014614419.1\|2049170_2049464_+	Na(+)/H(+) antiporter subunit F1	NA	NA	NA	NA
WP_014614420.1\|2049441_2049798_+	Na+/H+ antiporter subunit G1	NA	NA	NA	NA
WP_037543544.1\|2050733_2051111_-	PaaI family thioesterase	NA	NA	NA	NA
WP_037543546.1\|2051134_2052448_-	Na+/H+ antiporter family protein	NA	NA	NA	NA
WP_037543547.1\|2052585_2054073_-	leucyl aminopeptidase family protein	Q6GYZ8	Mycoplasma_phage	2.1e-52	39.3
WP_037543549.1\|2054337_2055540_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_014614425.1\|2055960_2056320_-	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	5.4e-15	41.6
WP_014614426.1\|2056332_2056569_-	YuzB family protein	NA	NA	NA	NA
WP_015728861.1\|2056859_2057924_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_014614428.1\|2058273_2058612_-	YuzD family protein	NA	NA	NA	NA
WP_014614429.1\|2058715_2058958_+	NifU family protein	Q58MC7	Prochlorococcus_phage	5.1e-09	44.4
WP_014614430.1\|2059542_2060508_-	D-glycerate dehydrogenase	Q89388	Paramecium_bursaria_Chlorella_virus	3.1e-25	28.3
WP_037543552.1\|2060514_2061300_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_081378297.1\|2061303_2061780_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_014614433.1\|2061835_2062102_+	DUF3055 domain-containing protein	NA	NA	NA	NA
WP_014614434.1\|2062730_2063096_-	DUF1027 domain-containing protein	NA	NA	NA	NA
WP_014614435.1\|2063114_2064032_-	lipoyl synthase	NA	NA	NA	NA
WP_037543556.1\|2064117_2065437_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_081378298.1\|2065453_2066278_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_014614438.1\|2066292_2067141_-	DUF72 domain-containing protein	A0A1D6Y809	Golden_Marseillevirus	3.7e-14	30.0
WP_037543560.1\|2067264_2067972_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_014614441.1\|2069036_2070035_-	DUF21 domain-containing protein	NA	NA	NA	NA
WP_037543563.1\|2070324_2070609_-\|protease	protease	NA	NA	NA	NA
2070758:2070779	attL	NA	NA	NA	NA
WP_065354735.1\|2071229_2071985_-	CHAP domain-containing protein	A0A1J0MF88	Staphylococcus_phage	2.2e-151	100.0
WP_065354736.1\|2071997_2072252_-\|holin	phage holin	A0A1J0MFI9	Staphylococcus_phage	7.7e-40	100.0
WP_065354737.1\|2072269_2074159_-	CHAP domain-containing protein	A0A1J0MFB0	Staphylococcus_phage	0.0e+00	100.0
WP_065354738.1\|2074282_2074657_-	hypothetical protein	A0A1J0MG33	Staphylococcus_phage	3.6e-54	100.0
WP_065354739.1\|2074689_2075961_-\|plate	BppU family phage baseplate upper protein	A0A1J0MFQ3	Staphylococcus_phage	4.3e-240	100.0
WP_015728843.1\|2075977_2077021_-	hypothetical protein	A0A1J0MFI8	Staphylococcus_phage	3.0e-191	100.0
WP_015728842.1\|2077032_2077725_-	hypothetical protein	A0A1J0MFD6	Staphylococcus_phage	1.7e-102	100.0
WP_015728841.1\|2077728_2079126_-	hypothetical protein	A0A1J0MFL4	Staphylococcus_phage	1.4e-260	100.0
WP_015728840.1\|2079138_2080071_-\|tail	phage tail family protein	A0A1J0MF79	Staphylococcus_phage	1.8e-179	100.0
WP_065354740.1\|2080083_2083203_-\|tail	phage tail protein	A0A223LI73	Staphylococcus_phage	1.6e-251	100.0
WP_015728838.1\|2083219_2083570_-	hypothetical protein	A0A1J0MFN5	Staphylococcus_phage	3.0e-58	100.0
WP_015728837.1\|2083599_2083980_-	hypothetical protein	A0A1J0MFH0	Staphylococcus_phage	1.1e-63	100.0
WP_015728836.1\|2084039_2084693_-\|tail	phage major tail protein, TP901-1 family	A0A1J0MG89	Staphylococcus_phage	1.1e-69	100.0
WP_015728835.1\|2084710_2085106_-	hypothetical protein	A0A1J0MFV3	Staphylococcus_phage	8.5e-70	100.0
WP_015728834.1\|2085117_2085468_-	HK97 gp10 family phage protein	A0A1J0MFN9	Staphylococcus_phage	2.4e-60	100.0
WP_015728833.1\|2085769_2086102_-\|head,tail	phage head-tail connector protein	A0A1J0MFR4	Staphylococcus_phage	1.1e-54	100.0
WP_015728832.1\|2086113_2086563_-	Ig domain-containing protein	A0A1J0MFD8	Staphylococcus_phage	8.4e-74	100.0
WP_015728831.1\|2086652_2087564_-	hypothetical protein	A0A1J0MFM8	Staphylococcus_phage	5.0e-166	100.0
WP_099986214.1\|2087581_2088325_-	DUF4355 domain-containing protein	A0A1J0MFG0	Staphylococcus_phage	2.0e-72	100.0
WP_037543592.1\|2088342_2088537_-	hypothetical protein	A0A1J0MG79	Staphylococcus_phage	3.5e-29	100.0
WP_037543593.1\|2088536_2089886_-\|capsid	minor capsid protein	A0A1J0MFV1	Staphylococcus_phage	2.3e-255	100.0
WP_037543595.1\|2089878_2091324_-\|portal	phage portal protein	A0A1J0MFN1	Staphylococcus_phage	5.2e-274	100.0
WP_037543597.1\|2091335_2092610_-\|terminase	PBSX family phage terminase large subunit	A0A1J0MFI2	Staphylococcus_phage	5.3e-238	100.0
WP_037543598.1\|2092596_2093040_-\|terminase	terminase small subunit	A0A1J0MFQ9	Staphylococcus_phage	4.9e-74	100.0
WP_037543601.1\|2093328_2093754_-	sigma-70 family RNA polymerase sigma factor	A0A1J0MFD1	Staphylococcus_phage	7.5e-72	100.0
WP_065354741.1\|2093845_2094025_-	DUF1381 domain-containing protein	A0A223LFC9	Staphylococcus_phage	1.3e-17	90.9
WP_065354742.1\|2094088_2094622_-	dUTP pyrophosphatase	A0A1J0MG68	Staphylococcus_phage	1.3e-92	100.0
WP_065354743.1\|2094614_2094866_-	hypothetical protein	A0A1J0MFM5	Staphylococcus_phage	1.4e-41	100.0
WP_065354744.1\|2095543_2095792_-	hypothetical protein	A0A1J0MFE3	Staphylococcus_phage	1.5e-43	100.0
WP_065354745.1\|2095791_2096043_-	hypothetical protein	A0A1J0MG61	Staphylococcus_phage	1.5e-40	100.0
WP_037543623.1\|2096799_2097108_-	hypothetical protein	A0A223LH51	Staphylococcus_phage	4.8e-52	100.0
WP_037543625.1\|2097118_2097337_-	hypothetical protein	A0A1J0MFG9	Staphylococcus_phage	7.0e-34	100.0
WP_065354746.1\|2097329_2097710_-	RusA family crossover junction endodeoxyribonuclease	A0A1J0MFP7	Staphylococcus_phage	1.0e-64	88.1
WP_065354747.1\|2097911_2099156_-	AAA family ATPase	A0A1J0MFK7	Staphylococcus_phage	1.3e-233	100.0
WP_065354055.1\|2099148_2099496_-	hypothetical protein	A0A1J0MFD5	Staphylococcus_phage	2.9e-58	100.0
WP_065354748.1\|2099486_2100182_-	hypothetical protein	A0A1J0MFS2	Staphylococcus_phage	2.9e-129	100.0
WP_065354749.1\|2100195_2100789_-	single-stranded DNA-binding protein	A0A1J0MFK5	Staphylococcus_phage	3.2e-65	100.0
WP_037543644.1\|2100785_2101415_-	single-stranded DNA-binding protein	A0A1J0MFG1	Staphylococcus_phage	8.9e-114	100.0
WP_065354750.1\|2101411_2101897_-	siphovirus Gp157 family protein	A0A1J0MFN6	Staphylococcus_phage	2.6e-81	100.0
WP_065354751.1\|2102118_2102379_-	DUF1108 family protein	A0A1J0MFJ8	Staphylococcus_phage	5.4e-41	100.0
WP_065354752.1\|2102448_2102637_-	hypothetical protein	A0A1J0MFC8	Staphylococcus_phage	3.3e-24	100.0
WP_015728800.1\|2102624_2102849_-	hypothetical protein	A0A1J0MG48	Staphylococcus_phage	6.1e-33	100.0
WP_065354753.1\|2102845_2103565_-	antirepressor	A0A1J0MFR6	Staphylococcus_phage	4.9e-132	100.0
WP_037543665.1\|2103642_2103870_+	hypothetical protein	A0A223LFH1	Staphylococcus_phage	1.9e-34	100.0
WP_015728796.1\|2104139_2104334_-	hypothetical protein	A0A1J0MFF3	Staphylococcus_phage	5.7e-19	100.0
WP_037543667.1\|2104390_2104654_+	CRISPR-associated protein Cas2	A0A1J0MFM9	Staphylococcus_phage	1.8e-44	100.0
WP_037543670.1\|2104829_2105066_-	helix-turn-helix transcriptional regulator	A0A1J0MFJ4	Staphylococcus_phage	7.9e-39	100.0
WP_037543672.1\|2105260_2105590_+	helix-turn-helix transcriptional regulator	A0A1J0MFC1	Staphylococcus_phage	3.3e-51	100.0
WP_037543674.1\|2105606_2106062_+	ImmA/IrrE family metallo-endopeptidase	A0A223LGM3	Staphylococcus_phage	1.5e-81	100.0
WP_037543677.1\|2106118_2106772_+	hypothetical protein	A0A1J0MG42	Staphylococcus_phage	3.2e-114	100.0
WP_037543680.1\|2106816_2107254_+	DUF4231 domain-containing protein	A0A1J0MFR0	Staphylococcus_phage	4.3e-75	100.0
WP_037543682.1\|2107247_2107655_+	TIR domain-containing protein	A0A1J0MFJ5	Staphylococcus_phage	3.4e-74	100.0
WP_037543684.1\|2107651_2107849_-	hypothetical protein	A0A1J0MFE5	Staphylococcus_phage	4.3e-30	100.0
WP_015728790.1\|2107963_2109013_+\|integrase	tyrosine-type recombinase/integrase	A0A223LI82	Staphylococcus_phage	1.7e-202	100.0
WP_019166866.1\|2109080_2110478_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
2109085:2109106	attR	NA	NA	NA	NA
WP_014614444.1\|2110575_2111025_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_014614445.1\|2111014_2112256_-	cysteine desulfurase	Q2XUY6	environmental_halophage	3.8e-124	50.1

DBSCAN-SWA_9

2156457 : 2202902

Staphylococcus_phage(63.41%)

integrase,tail,capsid,plate,portal,head,terminase,holin

attL 2149535:2149556|attR 2203969:2203990

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2149535:2149556	attL	NA	NA	NA	NA
WP_037543722.1\|2156457_2156955_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	3.4e-15	30.4
WP_014614489.1\|2157051_2157639_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.4e-52	54.7
WP_037543723.1\|2158031_2158220_-	hypothetical protein	M9NSU5	Staphylococcus_phage	1.5e-08	51.8
WP_037543725.1\|2158673_2159240_-	hypothetical protein	U3PBN3	Staphylococcus_phage	1.3e-66	69.1
WP_037543727.1\|2159724_2160672_-	N-acetylmuramoyl-L-alanine amidase	A0A1P8CMK9	Staphylococcus_phage	1.8e-86	52.7
WP_037543729.1\|2160687_2161122_-\|holin	phage holin family protein	A0A1S6KVE0	Staphylococcus_phage	4.4e-43	67.7
WP_037543730.1\|2161133_2162639_-	hypothetical protein	NA	NA	NA	NA
WP_037543731.1\|2162686_2163967_-\|plate	phage baseplate upper protein	A0A1J0MFQ3	Staphylococcus_phage	1.1e-110	48.8
WP_037544264.1\|2163985_2164981_-	SGNH/GDSL hydrolase family protein	A0A1J0MFI8	Staphylococcus_phage	1.4e-97	54.6
WP_037543732.1\|2164994_2165636_-	hypothetical protein	A0A1J0MFD6	Staphylococcus_phage	5.8e-36	51.9
WP_037543733.1\|2165638_2167054_-	hypothetical protein	A0A1J0MF94	Staphylococcus_phage	1.8e-117	46.0
WP_037543734.1\|2167068_2167989_-\|tail	phage tail family protein	A0A1J0MG18	Staphylococcus_phage	5.9e-82	51.4
WP_065354757.1\|2168001_2171706_-	hypothetical protein	Q4ZE24	Staphylococcus_virus	2.8e-21	45.4
WP_129924231.1\|2171837_2172182_-	hypothetical protein	Q4ZE25	Staphylococcus_virus	1.5e-17	44.6
WP_020219533.1\|2172250_2172598_-	hypothetical protein	H9A0N9	Staphylococcus_phage	1.3e-29	57.1
WP_020219534.1\|2172654_2173233_-\|tail	phage major tail protein, TP901-1 family	B7T0D7	Staphylococcus_virus	1.6e-29	44.4
WP_020219535.1\|2173246_2173633_-	hypothetical protein	NA	NA	NA	NA
WP_020219536.1\|2173646_2173994_-	hypothetical protein	A0A1J0MFN9	Staphylococcus_phage	5.2e-23	54.6
WP_037543735.1\|2173971_2174289_-	hypothetical protein	A0A1W6JNQ9	Staphylococcus_phage	1.1e-16	49.5
WP_037543736.1\|2174285_2174609_-\|head,tail	phage head-tail connector protein	B7T0D4	Staphylococcus_virus	1.2e-18	52.1
WP_037543737.1\|2175584_2176169_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_037543738.1\|2176352_2176538_-	hypothetical protein	NA	NA	NA	NA
WP_037543739.1\|2176559_2178143_-\|capsid	minor capsid protein	Q4ZE35	Staphylococcus_virus	1.2e-109	61.6
WP_129924935.1\|2178126_2179530_-\|portal	phage portal protein	A0A2P1JTZ3	Anoxybacillus_phage	1.3e-101	44.8
WP_037543740.1\|2179539_2180790_-\|terminase	PBSX family phage terminase large subunit	A0A059T7K2	Staphylococcus_phage	6.7e-145	61.4
WP_037543741.1\|2180782_2181223_-\|terminase	terminase small subunit	H9A0M8	Staphylococcus_phage	5.8e-43	73.2
WP_020219545.1\|2181447_2181864_-	hypothetical protein	I1W651	Staphylococcus_phage	1.2e-45	65.0
WP_099984919.1\|2181885_2183259_-	DEAD/DEAH box helicase	A7TWI6	Staphylococcus_phage	2.0e-219	79.8
WP_037543743.1\|2183233_2183530_-	VRR-NUC domain-containing protein	Q4ZD25	Staphylococcus_phage	1.3e-35	67.3
WP_161193300.1\|2183876_2184899_-	hypothetical protein	B5WZN5	Staphylococcus_phage	2.3e-167	78.5
WP_037543745.1\|2186389_2186614_+	hypothetical protein	NA	NA	NA	NA
WP_037543746.1\|2186676_2186976_-	hypothetical protein	I6SB84	Staphylococcus_virus	3.7e-41	84.8
WP_037543747.1\|2186959_2187205_-	hypothetical protein	NA	NA	NA	NA
WP_037543748.1\|2187206_2187404_-	hypothetical protein	NA	NA	NA	NA
WP_157980227.1\|2187418_2187589_-	hypothetical protein	NA	NA	NA	NA
WP_020219554.1\|2187840_2188104_-	DUF3310 domain-containing protein	A0A2H4JF64	uncultured_Caudovirales_phage	1.1e-25	78.3
WP_020219555.1\|2188115_2188613_-	hypothetical protein	NA	NA	NA	NA
WP_099984920.1\|2188628_2190581_-	DNA polymerase	Q4ZD45	Staphylococcus_phage	0.0e+00	85.7
WP_020219557.1\|2190643_2191195_-	DUF2815 family protein	Q4ZD46	Staphylococcus_phage	3.8e-84	87.0
WP_037543751.1\|2191215_2192382_-	DUF2800 domain-containing protein	Q4ZD47	Staphylococcus_phage	2.8e-177	77.8
WP_037543752.1\|2192378_2192714_-	hypothetical protein	Q4ZD48	Staphylococcus_phage	4.1e-17	45.3
WP_037543753.1\|2192788_2193103_-	DUF2482 family protein	NA	NA	NA	NA
WP_037543754.1\|2193282_2193606_-	DUF771 domain-containing protein	Q4ZD49	Staphylococcus_phage	6.5e-52	95.3
WP_037543755.1\|2193828_2194605_-	Rha family transcriptional regulator	I6TJS0	Staphylococcus_virus	1.1e-113	82.1
WP_037543756.1\|2194864_2195308_-	hypothetical protein	Q6R853	Staphylococcus_virus	3.3e-54	70.7
WP_000213811.1\|2195353_2195566_-	helix-turn-helix transcriptional regulator	A7TWF1	Staphylococcus_phage	1.6e-30	100.0
WP_037543757.1\|2195717_2196440_+	helix-turn-helix transcriptional regulator	A0A1J0MFC5	Staphylococcus_phage	2.5e-128	96.2
WP_037543758.1\|2196451_2196739_+	hypothetical protein	NA	NA	NA	NA
WP_037543759.1\|2196953_2197895_+	Abi family protein	NA	NA	NA	NA
WP_037543760.1\|2197983_2199021_+\|integrase	site-specific integrase	Q4ZD55	Staphylococcus_phage	2.1e-192	99.1
WP_014614491.1\|2200005_2200950_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.5e-53	39.6
WP_015728762.1\|2200996_2201992_-	YvcK family protein	A1IMD5	Streptococcus_phage	5.3e-52	43.0
WP_037543761.1\|2201993_2202902_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	4.3e-08	34.5
2203969:2203990	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2263084 : 2273906

Streptococcus_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037543783.1\|2263084_2265022_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	W6LM83	Streptococcus_phage	7.3e-106	37.5
WP_014614543.1\|2265366_2266371_-	biotin-dependent carboxyltransferase family protein	NA	NA	NA	NA
WP_037543786.1\|2266367_2267051_-	allophanate hydrolase subunit 1	NA	NA	NA	NA
WP_037543787.1\|2267061_2267271_-	hypothetical protein	NA	NA	NA	NA
WP_037543789.1\|2267279_2267894_-	aminotransferase class IV	NA	NA	NA	NA
WP_065354759.1\|2267890_2269039_-	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	5.6e-29	44.8
WP_014614547.1\|2269022_2269616_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	6.0e-35	41.4
WP_014614548.1\|2269876_2270545_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.0e-63	55.1
WP_014614549.1\|2270544_2270976_+	6-carboxytetrahydropterin synthase QueD	A0A2H4GYB3	Pseudomonas_phage	8.0e-05	30.7
WP_014614550.1\|2270968_2271682_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	2.7e-50	41.8
WP_037543793.1\|2271829_2272429_+	hypothetical protein	NA	NA	NA	NA
WP_014614552.1\|2272498_2272753_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_037543794.1\|2272925_2273906_-	glycosyltransferase	A0A192Y8W7	Salmonella_phage	2.4e-65	42.4

DBSCAN-SWA_11

2660092 : 2668371

Staphylococcus_phage(50.0%)

integrase

attL 2663038:2663052|attR 2668488:2668502

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051144710.1\|2660092_2660605_-	hypothetical protein	Q4ZE87	Staphylococcus_phage	1.7e-22	37.4
WP_037541910.1\|2660756_2661101_-	hypothetical protein	Q4ZE66	Staphylococcus_phage	2.0e-27	54.0
WP_037541913.1\|2661709_2663365_-	DUF927 domain-containing protein	Q4ZE73	Staphylococcus_phage	5.6e-131	43.0
2663038:2663052	attL	NA	NA	NA	NA
WP_037541915.1\|2663369_2664239_-	hypothetical protein	A0A1W6JQL5	Staphylococcus_phage	4.6e-44	37.7
WP_037541917.1\|2664253_2664574_-	DUF1474 family protein	A0A2H4JB50	uncultured_Caudovirales_phage	2.3e-25	56.3
WP_037541919.1\|2664577_2664925_-	hypothetical protein	A0A1W6JQI7	Staphylococcus_phage	6.4e-29	53.2
WP_019168679.1\|2664988_2665630_-	phage repressor protein	A0A2H4JB17	uncultured_Caudovirales_phage	1.1e-90	78.4
WP_154800901.1\|2665633_2665786_-	hypothetical protein	NA	NA	NA	NA
WP_037541924.1\|2665859_2666120_-	hypothetical protein	NA	NA	NA	NA
WP_019168676.1\|2666097_2666337_-	helix-turn-helix transcriptional regulator	A0A2H4JFN1	uncultured_Caudovirales_phage	1.8e-06	49.0
WP_019168675.1\|2666516_2667143_+	helix-turn-helix transcriptional regulator	A0A2H4JGT9	uncultured_Caudovirales_phage	5.6e-15	30.1
WP_037541925.1\|2667234_2668371_+\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	4.0e-72	39.2
2668488:2668502	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP016073.1|WP_015729174.1|1362381_1362729_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP016073.1|WP_015729174.1|1362381_1362729_-|hypothetical-protein

1362381_1362729_-

115 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|62	0.8173913043478261	1	1.0

1300557-1367022

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016073

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information