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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP015761 Bordetella pertussis strain VA-190, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 27 0

Results visualization

1. NZ_CP015761
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015761_1 584304-584388 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015761_2 958764-958873 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015761_3 2457692-2457819 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015761_4 3258996-3259112 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015761_5 3976913-3977006 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 12485 : 71073 45 uncultured_Mediterranean_phage(20.0%) transposase NA
DBSCAN-SWA_2 232781 : 297693 60 Planktothrix_phage(40.0%) transposase NA
DBSCAN-SWA_3 333713 : 403749 60 Natrialba_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_4 411347 : 469821 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_5 498606 : 559117 52 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_6 567049 : 621689 49 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_7 890074 : 949374 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_8 955529 : 1009270 50 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_9 1058157 : 1089966 22 Pseudomonas_phage(33.33%) protease,integrase,tRNA,transposase attL 1055456:1055474|attR 1075344:1075362
DBSCAN-SWA_10 1339919 : 1433956 88 Bacillus_virus(27.27%) transposase NA
DBSCAN-SWA_11 1464342 : 1535313 52 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_12 1635533 : 1692744 52 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_13 1782977 : 1835130 46 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_14 1879055 : 1938968 55 Streptococcus_virus(12.5%) tRNA,transposase NA
DBSCAN-SWA_15 1984140 : 2039731 49 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 2359900 : 2407916 44 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_17 2469478 : 2528748 52 Klosneuvirus(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_18 2538988 : 2583311 46 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 2596517 : 2657293 50 Erysipelothrix_phage(20.0%) transposase NA
DBSCAN-SWA_20 2856440 : 2911920 51 Planktothrix_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_21 2958013 : 3024513 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_22 3187078 : 3252662 53 Oenococcus_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_23 3270232 : 3331257 50 Catovirus(20.0%) holin,tRNA,transposase NA
DBSCAN-SWA_24 3335010 : 3401038 56 Pseudomonas_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_25 3405317 : 3467514 55 Bacillus_virus(15.38%) transposase NA
DBSCAN-SWA_26 3584540 : 3648641 53 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_27 3653641 : 3763152 115 uncultured_Caudovirales_phage(13.79%) protease,tail,transposase,tRNA,terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage