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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP015765 Bordetella pertussis strain VA-09, complete genome 5 crisprs cas3,DinG,csa3,DEDDh 0 0 28 0

Results visualization

1. NZ_CP015765
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015765_1 676659-676752 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015765_2 1240975-1241069 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015765_3 2136359-2136486 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015765_4 3673975-3674084 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015765_5 4057207-4057291 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 19577 : 87402 60 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_2 115225 : 151166 33 Sphingobium_phage(33.33%) transposase NA
DBSCAN-SWA_3 205495 : 272658 59 Planktothrix_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_4 457469 : 531813 56 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_5 835044 : 896234 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_6 901552 : 947749 52 uncultured_Caudovirales_phage(17.39%) tRNA,tail,transposase,terminase NA
DBSCAN-SWA_7 953915 : 1007845 49 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_8 1130434 : 1198410 59 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_9 1221588 : 1291860 56 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_10 1304078 : 1361460 47 uncultured_Mediterranean_phage(37.5%) tRNA,transposase,holin NA
DBSCAN-SWA_11 1396811 : 1462397 53 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_12 1624962 : 1691462 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_13 1719633 : 1758223 36 Emiliania_huxleyi_virus(14.29%) transposase,protease NA
DBSCAN-SWA_14 2038568 : 2086583 44 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_15 2148145 : 2207415 52 Klosneuvirus(40.0%) tRNA,transposase,protease NA
DBSCAN-SWA_16 2217655 : 2261978 46 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_17 2291751 : 2356120 52 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2542588 : 2603936 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_19 2624727 : 2695881 56 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_20 2780083 : 2831255 48 Salmonella_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_21 2929550 : 2970218 46 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_22 3025683 : 3098553 59 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_23 3101696 : 3168507 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_24 3198893 : 3239132 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_25 3623577 : 3677318 50 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_26 3683473 : 3742773 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_27 3757711 : 3815784 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_28 3976546 : 4094658 109 Bacillus_phage(12.5%) tRNA,transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage