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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP015770 Bordetella pertussis strain VA-10 chromosome, complete genome 4 crisprs cas3,DinG,csa3,DEDDh 0 0 29 0

Results visualization

1. NZ_CP015770
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015770_1 689987-690080 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015770_2 1254303-1254397 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015770_3 3703675-3703784 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015770_4 4077108-4077192 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 30805 : 98631 58 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_2 126454 : 162394 33 Sphingobium_phage(33.33%) transposase NA
DBSCAN-SWA_3 216723 : 283886 57 Planktothrix_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_4 469746 : 544090 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_5 848372 : 909562 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_6 914886 : 961077 50 uncultured_Caudovirales_phage(18.18%) terminase,tRNA,tail,transposase NA
DBSCAN-SWA_7 967243 : 1021173 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_8 1143762 : 1211738 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_9 1255267 : 1327784 60 Enterococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_10 1331537 : 1392564 51 Catovirus(20.0%) tRNA,transposase,holin NA
DBSCAN-SWA_11 1410134 : 1475717 52 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_12 1574851 : 1643338 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1703828 : 1759316 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_14 1868294 : 1936382 57 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_15 1972331 : 2027922 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 2260687 : 2330339 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_17 2341836 : 2392281 46 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_18 2403485 : 2444176 37 Klosneuvirus(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_19 2471959 : 2537507 58 Lake_Baikal_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_20 2806359 : 2872080 59 Salmonella_phage(15.38%) protease,tRNA,transposase NA
DBSCAN-SWA_21 2959246 : 2999915 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_22 3055380 : 3128250 58 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_23 3131393 : 3198205 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_24 3228591 : 3273331 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_25 3653277 : 3707018 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_26 3713173 : 3772473 47 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_27 3787411 : 3845484 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_28 3855284 : 3926625 59 Paramecium_bursaria_Chlorella_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_29 3996447 : 4112117 100 Bacillus_phage(12.5%) protease,tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage