CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015209	Campylobacter jejuni subsp. jejuni strain RM1285, complete genome	2 crisprs	DEDDh,WYL,c2c9_V-U4,cas2,cas1,cas9,csa3	0	5	2	0

1. NZ_CP015209

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015209_1

• CRISPR_ID: NZ_CP015209_1
• CRISPR_location: 1373192-1373271
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015209_1

Consensus_repeat	Method
TCTTTTTGTTCTTTTAAAGCTTC	CRISPRCasFinder

spacers of NZ_CP015209_1

>1.1|1373215|34|NZ_CP015209|CRISPRCasFinder
TTTTTTAGCTTTATACTCAGCCTTACTCATATAA

CRISPR arrays and Neighbor proteins around NZ_CP015209_1

CRISPR arrays

The CRISPR arrays of NZ_CP015209_1

>merge|NZ_CP015209|1|1373192-1373271|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTCTTTTTTAGCTTTATACTCAGCCTTACTCATATAATCTTTTTGTTCTTTTAAAGCATC

>NZ_CP015209|1|1|1373192-1373271|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTC	TTTTTTAGCTTTATACTCAGCCTTACTCATATAA
TCTTTTTGTTCTTTTAAAGCATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015209.1|WP_002780440.1|1375950_1376370_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015209.1|WP_002856648.1|1375602_1375950_+|holo-ACP-synthase	unknown	unknown	gnl|CDD|223807
NZ_CP015209.1|WP_002855429.1|1375065_1375602_+|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl|CDD|181433
NZ_CP015209.1|WP_002855922.1|1366962_1368456_-|hydrogenase-small-subunit	unknown	unknown	gnl|CDD|224654
NZ_CP015209.1|WP_002855324.1|1369955_1371158_-|phosphoglycerate-kinase	unknown	unknown	gnl|CDD|234613
NZ_CP015209.1|WP_002780453.1|1371160_1372159_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223135
NZ_CP015209.1|WP_002780456.1|1368459_1369284_-|enoyl-ACP-reductase-FabI	unknown	unknown	gnl|CDD|181416
NZ_CP015209.1|WP_002855339.1|1372791_1373118_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|223870
NZ_CP015209.1|WP_002855668.1|1382194_1382707_-|adenylyl-sulfate-kinase	unknown	unknown	gnl|CDD|235498
NZ_CP015209.1|WP_002855724.1|1378918_1380103_-|capsule-polysaccharide-modification-protein-KpsS	unknown	unknown	gnl|CDD|226092
NZ_CP015209.1|WP_002779147.1|1364903_1365128_+|ferrous-iron-transport-protein-A	unknown	unknown	gnl|CDD|224830
NZ_CP015209.1|WP_002855528.1|1369287_1369959_-|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NZ_CP015209.1|WP_002855346.1|1377724_1378846_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015209.1|WP_002856070.1|1380131_1382198_-|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|226093
NZ_CP015209.1|WP_002856001.1|1365124_1366966_+|ferrous-iron-transport-protein-B	unknown	unknown	gnl|CDD|223447
NZ_CP015209.1|WP_002855912.1|1373573_1374944_-|phosphoglucosamine-mutase-PgmL	unknown	unknown	gnl|CDD|100091
NZ_CP015209.1|WP_052822610.1|1363481_1364822_+|MmgE/PrpD-family-protein	unknown	unknown	gnl|CDD|377179
NZ_CP015209.1|WP_052805429.1|1376366_1377728_-|cytochrome-P450	unknown	unknown	gnl|CDD|225035
NZ_CP015209.1|WP_002855470.1|1372218_1372764_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl|CDD|223985
NZ_CP015209.1|WP_002856271.1|1382696_1383458_-|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|224134

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015209.1|WP_002856648.1|1375602_1375950_+|holo-ACP-synthase	gnl|CDD|223807	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism].	9.23009e-40
NZ_CP015209.1|WP_002855429.1|1375065_1375602_+|flagellar-basal-body-associated-protein-FliL	gnl|CDD|181433	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.19231e-91
NZ_CP015209.1|WP_002855922.1|1366962_1368456_-|hydrogenase-small-subunit	gnl|CDD|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	4.22221e-157
NZ_CP015209.1|WP_002855324.1|1369955_1371158_-|phosphoglycerate-kinase	gnl|CDD|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP015209.1|WP_002780453.1|1371160_1372159_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	2.96117e-168
NZ_CP015209.1|WP_002780456.1|1368459_1369284_-|enoyl-ACP-reductase-FabI	gnl|CDD|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP015209.1|WP_002855339.1|1372791_1373118_+|ribosome-silencing-factor	gnl|CDD|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	8.97235e-38
NZ_CP015209.1|WP_002855668.1|1382194_1382707_-|adenylyl-sulfate-kinase	gnl|CDD|235498	PRK05541, PRK05541, adenylylsulfate kinase; Provisional.	1.95617e-101
NZ_CP015209.1|WP_002855724.1|1378918_1380103_-|capsule-polysaccharide-modification-protein-KpsS	gnl|CDD|226092	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP015209.1|WP_002779147.1|1364903_1365128_+|ferrous-iron-transport-protein-A	gnl|CDD|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.69416e-22
NZ_CP015209.1|WP_002855528.1|1369287_1369959_-|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.79646e-86
NZ_CP015209.1|WP_002856070.1|1380131_1382198_-|capsular-polysaccharide-biosynthesis-protein	gnl|CDD|226093	COG3563, KpsC, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP015209.1|WP_002856001.1|1365124_1366966_+|ferrous-iron-transport-protein-B	gnl|CDD|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP015209.1|WP_002855912.1|1373573_1374944_-|phosphoglucosamine-mutase-PgmL	gnl|CDD|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP015209.1|WP_052822610.1|1363481_1364822_+|MmgE/PrpD-family-protein	gnl|CDD|377179	pfam03972, MmgE_PrpD, MmgE/PrpD family. This family includes 2-methylcitrate dehydratase EC:4.2.1.79 (PrpD) that is required for propionate catabolism. It catalyzes the third step of the 2-methylcitric acid cycle.	8.0529e-117
NZ_CP015209.1|WP_052805429.1|1376366_1377728_-|cytochrome-P450	gnl|CDD|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.30386e-76
NZ_CP015209.1|WP_002855470.1|1372218_1372764_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl|CDD|223985	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].	3.16494e-57
NZ_CP015209.1|WP_002856271.1|1382696_1383458_-|NTP-transferase-domain-containing-protein	gnl|CDD|224134	COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane].	1.06919e-74

Protein sequences

>NZ_CP015209.1|WP_002855339.1|1372791_1373118_+|ribosome-silencing-factor
MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKGRV
>NZ_CP015209.1|WP_002855470.1|1372218_1372764_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKIALFGGSFDPPHNGHNSVILEALEKLDIDKLIIMPTYINPFKQNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNTNEVCEEIKDEVKKYYEKLQKN
>NZ_CP015209.1|WP_002780453.1|1371160_1372159_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDDERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA
>NZ_CP015209.1|WP_002855324.1|1369955_1371158_-|phosphoglycerate-kinase
MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKENE
>NZ_CP015209.1|WP_002855528.1|1369287_1369959_-|triose-phosphate-isomerase
MIFAANLKCNHTRASFKIYAKILNKTMGVKCDDIIVFPPSIAFLENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGVSAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFIKLIKG
>NZ_CP015209.1|WP_002780456.1|1368459_1369284_-|enoyl-ACP-reductase-FabI
MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG
>NZ_CP015209.1|WP_002855922.1|1366962_1368456_-|hydrogenase-small-subunit
MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLSLGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKGPYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYTFIEQNFDENPMPLKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAEKPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKAFEDNITKISSLKAS
>NZ_CP015209.1|WP_002856001.1|1365124_1366966_+|ferrous-iron-transport-protein-B
MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKTFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKIIILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNALGEFVKNNISNTFIASALADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWYLVWFMVYNKAKMYLKKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKSIEPIFQPLGLDWKLSVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIYNPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN
>NZ_CP015209.1|WP_002779147.1|1364903_1365128_+|ferrous-iron-transport-protein-A
MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSLKNATIMVELDTSCVILRSDEAKTIEVNLI
>NZ_CP015209.1|WP_052822610.1|1363481_1364822_+|MmgE/PrpD-family-protein
MFYSEILADFIFNLKYENIPNAVVQRAKELMLDSLGTVIAASKEECVLNAFKAFENLSTEKNTPIWINDQKLDPIYAAMLDGIASHALDFDDTHTEAILHASAILTPLCLSYGFHVSKDAKKIIKAFIIGWEIAARVGIASKGTFHKRGFHTTAIAGIFGSVSASAILLDLNKEQIINALGLAGSFASGVNEFLSNGSNSKVLHIANAIKNGIMVAHFAKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELNKALGEIWQTMQVSIKPYPSCHFAHGLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLMALGFFDGKITLNSYENLKREEVLEFAKKISYEKRKSQGFPKYFPGHLEASLQDGHIIQKDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF
>NZ_CP015209.1|WP_002855912.1|1373573_1374944_-|phosphoglucosamine-mutase-PgmL
MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDEIEENLEVEKYDILSLYVKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIELLIKALNLKAHVMFSEPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKNIPNPRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLRVLELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEIKARLKN
>NZ_CP015209.1|WP_002855429.1|1375065_1375602_+|flagellar-basal-body-associated-protein-FliL
MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDFVVS
>NZ_CP015209.1|WP_002856648.1|1375602_1375950_+|holo-ACP-synthase
MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAGLWAAKEAASKALGVGICELCNFFDIEISKDERNAPKLKYSQKITKDFNITQTSLSISHDNGFAIAIVAVV
>NZ_CP015209.1|WP_002780440.1|1375950_1376370_-|hypothetical-protein
MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGYLFIVIIGIFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK
>NZ_CP015209.1|WP_052805429.1|1376366_1377728_-|cytochrome-P450
MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVKMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELLRPSFEMTRINKVFNLMSEAVADMMDRFNKYPNHAIIEVDEAMTFITADVIFRTIMSSKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDCKRAKAGDVIRQVLSDIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLYLLSLYLKEQEKAYEEIIQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKRKL
>NZ_CP015209.1|WP_002855346.1|1377724_1378846_-|hypothetical-protein
MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKTDLNKIEKNEQFPFFQISCEGVETKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKFGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLNHFLFKLGKKLAVFWIARICAFCATWQDKKTGIMQERIKLFANTIVDKLKQNESKQDYELILVAHSVGTIVCIEVLECILRQNLDLSLLRKLKILTLGECIPLVSYQKKAGEFRKKLEFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI
>NZ_CP015209.1|WP_002855724.1|1378918_1380103_-|capsule-polysaccharide-modification-protein-KpsS
MKISKKLQQEFTSKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYIHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLKTTQFNGNFYKNFFLDK
>NZ_CP015209.1|WP_002856070.1|1380131_1382198_-|capsular-polysaccharide-biosynthesis-protein
MKYYSTSKKLIANVGNFYSIFLYKRNLKINKDDLFFGWGRKKSGLKAMNLAKKHKAKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDGTMPSKLENLLNTYEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDASLGFGLAKDFKTVDMIKDAIKENPDSKIYIKIHPDVLSGKKQSDLDINSLPKECILITENFNPIALLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKRSLEEVFYAAYILYSEYFNPCLNQKSNIFDTIQTLAKYKDIEKVNSNRLFMLGFTLWKRHFIKPFFKAKDNEIIFLNSIKSLVRYKLKEDDKFFIWGKKYDENTLKNLLLTKAKEQNLTNFSPKVSLVEDGFIRSISLGSDLTRPFSLIVDNKGLYIDPNKASKLEELLQNEIFDENILNRAKNIIKILLENRFSKYNGLKHENLKINAKIGQKIILIPAQVEDDASMILGGFGLSTLDLLKEVRAKNQDAYIIFKPHPDVLSGNRVGLKDEKLILEFCDEIVKDCSIDSAIKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKHKCERRTRKLSLEELVAGALITYPRYINPKTKILCEIEVCLDIMLNLQKDYFSKSYLKIIIDLRNFLLRRMRRIVENIIK
>NZ_CP015209.1|WP_002855668.1|1382194_1382707_-|adenylyl-sulfate-kinase
MINSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDELREILGHYAYDRQGRIDMALKRAKFAKFLNDQGMIVIVTTISMFNEIYDYNRKQLKNYYEIYIECDMHELMQRDQKGLYTKALNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEKVELIIKKLAL
>NZ_CP015209.1|WP_002856271.1|1382696_1383458_-|NTP-transferase-domain-containing-protein
MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSAGINEIAVVGGYLNDVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFMLKCIKEKQDLIVSYADIVYFQDCVQKLINIKEELAIVVDKSWRKLWSKRFANPLEDAETLKMTNGYIIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSFLQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIDK

Crispr_ID: NZ_CP015209_2

• CRISPR_ID: NZ_CP015209_2
• CRISPR_location: 1489654-1489887
• CRISPR_type: orTypeII
• Repeat_type: NA
• Spacer_info: 3 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NZ_CP015209_2

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	PILER-CR

spacers of NZ_CP015209_2

>2.1|1489690|30|NZ_CP015209|CRISPRCasFinder,CRT
TTATTTTTGTCGCTAATTGCACCTAAAGAC
>2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT
AAATTTACAGCACAAAATAAAGATTTTAAT
>2.3|1489822|30|NZ_CP015209|CRISPRCasFinder,CRT
TTTTGTTGAGTGGGTTATGAGCCAAAAGAA
>2.4|1489691|30|NZ_CP015209|PILER-CR
TTATTTTTGTCGCTAATTGCACCTAAAGAC
>2.5|1489757|30|NZ_CP015209|PILER-CR
AAATTTACAGCACAAAATAAAGATTTTAAT
>2.6|1489823|30|NZ_CP015209|PILER-CR
TTTTGTTGAGTGGGTTATGAGCCAAAAGAA

CRISPR arrays and Neighbor proteins around NZ_CP015209_2

CRISPR arrays

The CRISPR arrays of NZ_CP015209_2

>merge|NZ_CP015209|2|1489654-1489887|CRISPRCasFinder,CRT,PILER-CR
TTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTTATTTTTGTCGCTAATTGCACCTAAAGACGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAAATTTACAGCACAAAATAAAGATTTTAATGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTTTTGTTGAGTGGGTTATGAGCCAAAAGAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP015209|2|2|1489654-1489887|CRISPRCasFinder
TTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTATTTTTGTCGCTAATTGCACCTAAAGAC
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AAATTTACAGCACAAAATAAAGATTTTAAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTTTGTTGAGTGGGTTATGAGCCAAAAGAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP015209|2|1|1489654-1489887|CRT
TTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTATTTTTGTCGCTAATTGCACCTAAAGAC
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AAATTTACAGCACAAAATAAAGATTTTAAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTTTGTTGAGTGGGTTATGAGCCAAAAGAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP015209|2|1|1489655-1489887|PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	TATTTTTGTCGCTAATTGCACCTAAAGACG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA	AATTTACAGCACAAAATAAAGATTTTAATG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	TTTGTTGAGTGGGTTATGAGCCAAAAGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015209.1|WP_002855314.1|1494502_1495957_+|anaerobic-C4-dicarboxylate-transporter-DcuC	unknown	unknown	gnl|CDD|225611
NZ_CP015209.1|WP_002855524.1|1499081_1500119_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NZ_CP015209.1|WP_002855997.1|1497629_1498379_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NZ_CP015209.1|WP_002855819.1|1484449_1485598_-|carboxynorspermidine-decarboxylase	unknown	unknown	gnl|CDD|273414
NZ_CP015209.1|WP_002855427.1|1495977_1496967_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439
NZ_CP015209.1|WP_002856551.1|1498353_1499085_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	unknown	unknown	gnl|CDD|225539
NZ_CP015209.1|WP_002851537.1|1483266_1483458_-|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl|CDD|236534
NZ_CP015209.1|WP_002779488.1|1487264_1487486_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|224888
NZ_CP015209.1|WP_002807151.1|1490454_1491345_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NZ_CP015209.1|WP_002856113.1|1497027_1497633_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NZ_CP015209.1|WP_002797817.1|1490030_1490462_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP015209.1|WP_002867221.1|1488345_1489536_+|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl|CDD|223380
NZ_CP015209.1|WP_002869803.1|1485721_1487263_+|multicopper-oxidase-CueO	unknown	unknown	gnl|CDD|225043
NZ_CP015209.1|WP_002851264.1|1479824_1480466_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319893
NZ_CP015209.1|WP_052805507.1|1491341_1494296_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226044
NZ_CP015209.1|WP_002867223.1|1487486_1487930_+|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|223391
NZ_CP015209.1|WP_079460809.1|1480462_1483267_-|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl|CDD|239153
NZ_CP015209.1|WP_002851546.1|1500183_1500633_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NZ_CP015209.1|WP_012006785.1|1483432_1484146_-|hypothetical-protein	unknown	unknown	gnl|CDD|225916
NZ_CP015209.1|WP_002869804.1|1487926_1488343_+|GyrI-like-domain-containing-protein	unknown	unknown	gnl|CDD|214874

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP015209.1|WP_002797817.1|1490030_1490462_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	5.1e-59	192.3	1.5
NZ_CP015209.1|WP_052805507.1|1491341_1494296_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	0	1161.1	71.5
NZ_CP015209.1|WP_002807151.1|1490454_1491345_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	8.2e-99	324.9	9.8

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015209.1|WP_002855314.1|1494502_1495957_+|anaerobic-C4-dicarboxylate-transporter-DcuC	gnl|CDD|225611	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion].	6.55616e-71
NZ_CP015209.1|WP_002855524.1|1499081_1500119_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.6328e-34
NZ_CP015209.1|WP_002855997.1|1497629_1498379_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.75008e-93
NZ_CP015209.1|WP_002855819.1|1484449_1485598_-|carboxynorspermidine-decarboxylase	gnl|CDD|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP015209.1|WP_002855427.1|1495977_1496967_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP015209.1|WP_002856551.1|1498353_1499085_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	gnl|CDD|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	8.6877e-99
NZ_CP015209.1|WP_002851537.1|1483266_1483458_-|twin-arginine-translocation-signal-domain-containing-protein	gnl|CDD|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NZ_CP015209.1|WP_002779488.1|1487264_1487486_+|MoaD/ThiS-family-protein	gnl|CDD|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	1.67964e-11
NZ_CP015209.1|WP_002807151.1|1490454_1491345_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.22802e-121
NZ_CP015209.1|WP_002856113.1|1497027_1497633_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	8.14455e-71
NZ_CP015209.1|WP_002797817.1|1490030_1490462_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.92184e-59
NZ_CP015209.1|WP_002867221.1|1488345_1489536_+|molybdopterin-molybdotransferase-MoeA	gnl|CDD|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	8.12925e-144
NZ_CP015209.1|WP_002869803.1|1485721_1487263_+|multicopper-oxidase-CueO	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	7.67465e-120
NZ_CP015209.1|WP_002851264.1|1479824_1480466_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57
NZ_CP015209.1|WP_052805507.1|1491341_1494296_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP015209.1|WP_002867223.1|1487486_1487930_+|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	2.25273e-43
NZ_CP015209.1|WP_079460809.1|1480462_1483267_-|formate-dehydrogenase-subunit-alpha	gnl|CDD|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP015209.1|WP_002851546.1|1500183_1500633_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NZ_CP015209.1|WP_012006785.1|1483432_1484146_-|hypothetical-protein	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000581315
NZ_CP015209.1|WP_002869804.1|1487926_1488343_+|GyrI-like-domain-containing-protein	gnl|CDD|214874	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain. This domain is found in the probable effector binding domain of a number of different bacterial transcription activators.and is also present in some DNA gyrase inhibitors. The absence of a HTH motif in the DNA gyrase inhibitors is thought to indicate the fact that these do not bind DNA.	2.37716e-11

Protein sequences

>NZ_CP015209.1|WP_002867221.1|1488345_1489536_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILITTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNVEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDIIFMP
>NZ_CP015209.1|WP_002869804.1|1487926_1488343_+|GyrI-like-domain-containing-protein
MIQEIEEFSIYGVSVKTDEELESDLNSSLIFPLWKKFHSIFGAPDEIYSVYYDYKNTHKLEYKICVGMKNPHEKGEKICIKGGKYMLFEDSGKPEIIAPKLWQNINEFFKNSSLQRKFDTDFEFYTTNKTQIYISMKE
>NZ_CP015209.1|WP_002867223.1|1487486_1487930_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGGIEALSFDIYEPLLKKWFDEWQKRVDFDGISLLFAHSIGDVAVHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLK
>NZ_CP015209.1|WP_002779488.1|1487264_1487486_+|MoaD/ThiS-family-protein
MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKDGDKIALLPPVCGG
>NZ_CP015209.1|WP_002869803.1|1485721_1487263_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGEFRLESAYYDRDKMMVEEEPNTLFLASISLKKEKLELPKNLKIFKPLEEPKEFKEIIMSEDHMQMHGMMGKSENELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRAFRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_CP015209.1|WP_002855819.1|1484449_1485598_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCEESADALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLDHKNELQMIREFSYKDYSLRN
>NZ_CP015209.1|WP_012006785.1|1483432_1484146_-|hypothetical-protein
MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIAMAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NZ_CP015209.1|WP_002851537.1|1483266_1483458_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NZ_CP015209.1|WP_079460809.1|1480462_1483267_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALGEIGEKLAAYRKENPESVMFLGSAKMSNEQAYYVRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_CP015209.1|WP_002851264.1|1479824_1480466_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_CP015209.1|WP_002797817.1|1490030_1490462_-|CRISPR-associated-endonuclease-Cas2
MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF
>NZ_CP015209.1|WP_002807151.1|1490454_1491345_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSISSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFVLKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_CP015209.1|WP_052805507.1|1491341_1494296_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNNGDEEKGKILKAIKQNEEKLVNYQSVGEYLYKEYFQKFKENSKEFINVRNKKESYERCITQSFLKYELKLIFQKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINILNNLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGEHNLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKILNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDAEIECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKLSDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNKTPFEAFGNDSTKWQKIEVLAKNLPEKKQKRILDKNYKDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSAKDRNNHLHHAIDAAIIAYANNSIVKAFSDFKKEQESNSVELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK
>NZ_CP015209.1|WP_002855314.1|1494502_1495957_+|anaerobic-C4-dicarboxylate-transporter-DcuC
MPIFMICSTLLAVIVVTYYILKKYNPIFVFFLSGIILLIFAFYITGTPIPKAPSREHASFLNVLLDSYAFITATFKSQLSGVGLIIMSVAGFAAYMKHINASAKLAFLANKPLGKIKNKYLILSGTFVVGMALKIVISSYAGLLLLLLACIYPVLISLKIRPITAVCVLSLIALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVVVIAILIPFYFAWIDKRDKEKGVLNDEVEIPQIIDPKCPTFYILFPWLPVVFLFTAYFFTIKLDVVTANFVSISLVFLVEFARHRNARKLGEDMMVILKAMAEIFISVVSIIIAAGVFAEGIKALGGVNILANAVSNLGTGNFAWFGILLSIAILSFLVYFATVIMGSGIAAFNAFGKLAPDIATKLDVAPITLVLPIEIASCLGRAASPIAGGIIALAGFAKVAPMDIIKRTTPLLLIAMLVNVLVAFYLAQTNPLPKEQNTTKIELKIQK
>NZ_CP015209.1|WP_002855427.1|1495977_1496967_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NZ_CP015209.1|WP_002856113.1|1497027_1497633_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHEILDENALELEKIFSPFSLKNLLTKEKKIDRKILGKIVFNNKEAKKTLENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGKM
>NZ_CP015209.1|WP_002855997.1|1497629_1498379_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGVIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFAYKNEELFFEGKVKYCFEANYNFS
>NZ_CP015209.1|WP_002856551.1|1498353_1499085_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase
MKPIIIFLSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLIMIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVYSYVLNLNRHFAYEKFRDARAKFASEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_CP015209.1|WP_002855524.1|1499081_1500119_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINIPIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDSFFEQGVKFEVISFDKFSLGF
>NZ_CP015209.1|WP_002851546.1|1500183_1500633_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	MN530981	Campylobacter phage DA10, complete genome	17051-17080	0	1.0
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	MN530981	Campylobacter phage DA10, complete genome	17051-17080	0	1.0
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	KX190832	Bacillus phage vB_BtS_BMBtp13, complete genome	11788-11817	3	0.9
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	KX190832	Bacillus phage vB_BtS_BMBtp13, complete genome	11788-11817	3	0.9
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NC_019898	Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence	93831-93860	5	0.833
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NC_019898	Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence	93831-93860	5	0.833
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NZ_CP039278	Salmonella enterica subsp. enterica strain 12-0523 plasmid p12-0523.1, complete sequence	17140-17169	6	0.8
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	479086-479115	6	0.8
NZ_CP015209_2	2.3|1489822|30|NZ_CP015209|CRISPRCasFinder,CRT	1489822-1489851	30	JX560521	Acinetobacter phage phiAC-1, complete genome	6842-6871	6	0.8
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NZ_CP039278	Salmonella enterica subsp. enterica strain 12-0523 plasmid p12-0523.1, complete sequence	17140-17169	6	0.8
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	479086-479115	6	0.8
NZ_CP015209_2	2.6|1489823|30|NZ_CP015209|PILER-CR	1489823-1489852	30	JX560521	Acinetobacter phage phiAC-1, complete genome	6842-6871	6	0.8
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NZ_KT897276	Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence	103429-103458	7	0.767
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NZ_KT897280	Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence	113149-113178	7	0.767
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	108352-108381	7	0.767
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NZ_KT897277	Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence	103429-103458	7	0.767
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NZ_KT897278	Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence	110574-110603	7	0.767
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NZ_KT897279	Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence	111710-111739	7	0.767
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	259089-259118	7	0.767
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NZ_KT897276	Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence	103429-103458	7	0.767
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NZ_KT897280	Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence	113149-113178	7	0.767
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	108352-108381	7	0.767
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NZ_KT897277	Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence	103429-103458	7	0.767
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NZ_KT897278	Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence	110574-110603	7	0.767
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NZ_KT897279	Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence	111710-111739	7	0.767
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	259089-259118	7	0.767
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	CP040041	Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence	372000-372029	8	0.733
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	NZ_CP019193	Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence	4652-4681	8	0.733
NZ_CP015209_2	2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT	1489756-1489785	30	MN694426	Marine virus AFVG_250M547, complete genome	35831-35860	8	0.733
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	CP040041	Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence	372000-372029	8	0.733
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	NZ_CP019193	Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence	4652-4681	8	0.733
NZ_CP015209_2	2.5|1489757|30|NZ_CP015209|PILER-CR	1489757-1489786	30	MN694426	Marine virus AFVG_250M547, complete genome	35831-35860	8	0.733
NZ_CP015209_1	1.1|1373215|34|NZ_CP015209|CRISPRCasFinder	1373215-1373248	34	MH752385	Bacillus phage Ray17, complete genome	8509-8542	10	0.706

1. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

aaatttacagcacaaaataaagattttaat	CRISPR spacer
aaatttacagcacaaaataaagattttaat	Protospacer
******************************

2. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

aaatttacagcacaaaataaagattttaat	CRISPR spacer
aaatttacagcacaaaataaagattttaat	Protospacer
******************************

3. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to KX190832 (Bacillus phage vB_BtS_BMBtp13, complete genome) position: , mismatch: 3, identity: 0.9

aaatttacagcacaaaataaagattttaat	CRISPR spacer
atatttaaagcgcaaaataaagattttaat	Protospacer
* ***** ***.******************

4. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to KX190832 (Bacillus phage vB_BtS_BMBtp13, complete genome) position: , mismatch: 3, identity: 0.9

aaatttacagcacaaaataaagattttaat	CRISPR spacer
atatttaaagcgcaaaataaagattttaat	Protospacer
* ***** ***.******************

5. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NC_019898 (Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence) position: , mismatch: 5, identity: 0.833

aaatttacagcacaaaataaagattttaat	CRISPR spacer
aaatttacttcacaaaataaagattttgcg	Protospacer
********  *****************.  

6. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NC_019898 (Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence) position: , mismatch: 5, identity: 0.833

aaatttacagcacaaaataaagattttaat	CRISPR spacer
aaatttacttcacaaaataaagattttgcg	Protospacer
********  *****************.  

7. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NZ_CP039278 (Salmonella enterica subsp. enterica strain 12-0523 plasmid p12-0523.1, complete sequence) position: , mismatch: 6, identity: 0.8

aaatttacagcacaaaataaagattttaat	CRISPR spacer
aagaacacagcagacaataaagattttaat	Protospacer
**.  .****** * ***************

8. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

aaatttacagcacaaaataaagattttaat	CRISPR spacer
acttttacagctcaatataaagatttaagt	Protospacer
*  ******** *** ********** *.*

9. spacer 2.3|1489822|30|NZ_CP015209|CRISPRCasFinder,CRT matches to JX560521 (Acinetobacter phage phiAC-1, complete genome) position: , mismatch: 6, identity: 0.8

ttttgttgagtgggttatgagccaaaagaa	CRISPR spacer
ttttgtggagtgggttatgagcaaactaga	Protospacer
****** *************** **  ..*

10. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NZ_CP039278 (Salmonella enterica subsp. enterica strain 12-0523 plasmid p12-0523.1, complete sequence) position: , mismatch: 6, identity: 0.8

aaatttacagcacaaaataaagattttaat	CRISPR spacer
aagaacacagcagacaataaagattttaat	Protospacer
**.  .****** * ***************

11. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

aaatttacagcacaaaataaagattttaat	CRISPR spacer
acttttacagctcaatataaagatttaagt	Protospacer
*  ******** *** ********** *.*

12. spacer 2.6|1489823|30|NZ_CP015209|PILER-CR matches to JX560521 (Acinetobacter phage phiAC-1, complete genome) position: , mismatch: 6, identity: 0.8

ttttgttgagtgggttatgagccaaaagaa	CRISPR spacer
ttttgtggagtgggttatgagcaaactaga	Protospacer
****** *************** **  ..*

13. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

14. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

15. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

16. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

17. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

18. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

19. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gcttttacagctcaatataaagatttaagt	Protospacer
.  ******** *** ********** *.*

20. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

21. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

22. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

23. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

24. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

25. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gacatcacaacacaaaaaaaagattttaaa	Protospacer
.*  *.***.******* *********** 

26. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 7, identity: 0.767

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gcttttacagctcaatataaagatttaagt	Protospacer
.  ******** *** ********** *.*

27. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaatttacagcacaaaataaagattttaat	CRISPR spacer
aaatttaaagcacaaaataaaagaggctat	Protospacer
******* *************..   . **

28. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to NZ_CP019193 (Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence) position: , mismatch: 8, identity: 0.733

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gaatttagagcacaaaataaacatggatac	Protospacer
.****** ************* **    *.

29. spacer 2.2|1489756|30|NZ_CP015209|CRISPRCasFinder,CRT matches to MN694426 (Marine virus AFVG_250M547, complete genome) position: , mismatch: 8, identity: 0.733

aaatttacagcacaaaataaagattttaat	CRISPR spacer
acgacaacagcacaaaagaaagatttaaag	Protospacer
* . . *********** ******** ** 

30. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaatttacagcacaaaataaagattttaat	CRISPR spacer
aaatttaaagcacaaaataaaagaggctat	Protospacer
******* *************..   . **

31. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to NZ_CP019193 (Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence) position: , mismatch: 8, identity: 0.733

aaatttacagcacaaaataaagattttaat	CRISPR spacer
gaatttagagcacaaaataaacatggatac	Protospacer
.****** ************* **    *.

32. spacer 2.5|1489757|30|NZ_CP015209|PILER-CR matches to MN694426 (Marine virus AFVG_250M547, complete genome) position: , mismatch: 8, identity: 0.733

aaatttacagcacaaaataaagattttaat	CRISPR spacer
acgacaacagcacaaaagaaagatttaaag	Protospacer
* . . *********** ******** ** 

33. spacer 1.1|1373215|34|NZ_CP015209|CRISPRCasFinder matches to MH752385 (Bacillus phage Ray17, complete genome) position: , mismatch: 10, identity: 0.706

ttttttagctttatactcagccttactcatataa	CRISPR spacer
cttacaagctttatactcagccttattgatcgtt	Protospacer
.** . *******************.* **    

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	880077 : 889991	17	Campylobacter_phage(42.86%)	integrase	attL 875876:875890|attR 890499:890513
DBSCAN-SWA_2	908770 : 917188	11	Campylobacter_phage(88.89%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP015209|880077:889991|DBSCAN-SWA
AGTGCTAAACGATACCAAAATAAAAGCCTTAAAAGCTAAAGACAAAAAATACTATATTGCTGATTTTGACAACCTACTTCTTTGTATTTATCCGAGCGGTAAGAAAACTTTTATATTTAATTATAAATGTCCTAAAACTTTAAGATACAAAAGAATAACTCTAGGAGAATACCCTACTCTCAATCTTGCTAACGCTAGAAAACAAAGAGATAATCTAAAAGTAAATTTAGCTGAAAATGACAGTATAAGAGAAAAGTCTGAAATAACATTTAAAGAATTAGCATTGGAAAAAATGGATCTTAAAAAACTTGAATTAAGCGAAAAAACCTACAAAAGCTATATGAGTTATTTACAAAGATTTGCTTTTGGAATTTATGGAGAAATTATATTAGATAAATTGCAAATCAAGGATATTTTAAAAAGTTTTGAAAAATTTAGAAAAGAAAATATAAGAGAAGGTGCCGATAAGTTCTTTACTCTTTTAAATGAAATTTTTAGACATGGTGTTATAAAAGAATATATTAAAAGTAACCCCATAGCAAATCTAAATAGAAAAGAATTGCTTATAAATAAAGCGAGTAAAAATCATGCCACCTTGTTGGAAACTAAAGAAATTAAAGCATTAATAGATAATATAATTGATTACAAGGGATATATTAGTGTAAAAATTGCAGCAATGTTTTCTTTATTAACTGCACAAAGAAGCTTTAGTATAAGAAGTGCAAAATGGGAAGATATTGATTTGGATAATGGCGTTTGGTATATACCGCAAGAAGATATGAAGATGAAAAGAGCACATACTATACCTTTAAATTCTCAATGTGTATATATGCTTAAAAAATACAAAGAGATGAGTATTAATACGGGTTATTTATTTTATAGTTTAAGAAGTAAAAGTGAAATTATAAGCGATAACACAATTAGATCCATGTTTAGAAGAATGGGCTACTCTAATGATGATTTTACACCTCATGGCTTTCGTGCTATGTTTAGCACCCTAGCCCATGAAAATAGAAATAAACACCAAATGAGTAGCGATATTATAGAATTGTGTTTAGCGCATGTAGAAAAAAATAAGATTAAATCTGCGTATAACCATGCTTTAAATTTAAAGGAAAAAGCTATCCTTATGCAGTGGTGGGGAGATTATCTTGATGAGATTGCTGATCTAAATCAACAAGTCCGAAATATTTTTTTATAAAATTTTCAATATCATGCTTAGGATACAATCCTGAGCAATTTCTATGTTGTTTAAACTCTCTAAATTTGCCTTGTTTGGCGTATTTGTGAACTATAGGCTCTTTTACTTTTAAAAGATTTGCAACTTCTTTTCTTGTGTAATAATCTCCGATATCTAATCTAATCATTTTCAACTCCCAATCTTTTATCTATAATTTCAAAAATAGTATCCTTATAATAATTCCAAAGCCATTTCTGTTCTTCGCCTTCTAAATCATCAACGCTTAAATTACGCCATTCTTTTATTGTTTTAGTATCACAGCCTAAATTCATCATAGTTTTTGTAAAAGTCATAACATAGGTATCCAAGACAACGCTAAAGATATTTTTCATATCTCCTATACAATCCCTAAGATCTACATTTTCAAATATACAATTTTCAAATTCTGTTCTTAGAAAATTACAAAAATGGAAACTTGCTCCACTAAAATCGCAATCTATAAAAGATGTATTTTTACTTGAAATATCATTTAAATTAGCATTTTTAAAACTAGCTCCATTTATAAATGCATTATTAAAATCTAATCCACTTAAATTTATATTTTCCAAGTTTGCATCATTTAAAGAAATCCCTTCTAAAATACAATACTCAACTAATTCTTTTTCACTTTTTCTATCATTTTCGATAATGATAGTTTTATCTAATCTTTTTAAAATTCCCATTTTAACTCCTTAATTCTTTTTTCTAAAAGCTCAATTTTTTTAATATTTAATTCCAAGATTTTAATATTTAATTCTAATGTTTTTTTGTTTTGTTCTAAAAGCTCAACTTGTGCTTTTTGATATTTATAGTTAAAAAACATCAGAATGAAAAATAATATAAAAAGTAAAACTAAGATGATATTTAACATTTTATAACCTGTAACTTTTATAATCAGCTTTATACCATTTTCTAATATAATAATCTTCATAATCTCCATTATTATCTTCGATTCTTATGCACCAAAAATCACTACCTTCTTTGTCTAAAAAATATTTATTTGGCACATTTGTTAATTTAAAATCATTAATTGCTAAATCAAAAGCCTCTCTTTCATAATAAGCTCCTATTTTTTCGACAAATCTATTTAATCTCTCATCATAAAACCCTGTACGACTTTCAATCTCTTTAATTTTTTCTAGCATACATTTATAGAAGTCAAAACCTAAGTTTTTAACTAAAATCTCTATCTCAACAATTAATAAATATTCAAAATCTTCATCTTTGCTATTATTATAAACTGTCTTATTATTGTGTTCTATAAAATAGCTTGTAAAATGGTCAATCAAATGAATCATACCTGCTCTTTTTATATTTGAAATTTCTCCAAATTTTAATTCAAAAGCATTAAAGAAAAATACTGCAATATCACACAAAGCTTCAACTCTTTCTAAATCATCTTTTGCTCTAAAATACTCGCTTACTTTTTCAAAAACATTACCCAAAAACTCTTCTCTTTGATTTTCATAGGTTAAACCTCTTTCACTTCTCCAATCGGCTAATCTTTCTTTAATTTCATTAAATTGTATTTCTGTCATCTTTTTTAATCCTTTGCTATCTTTTTAACTTCTTTTGTGGTATAAATCTCATTTAAAGCATGCAAGATATTAGCTTCTTTTAGTATTTTTATAAAGTTGATATCATCATTATCAAGTTTTGCTTTAAAAGCTAATTTTGAGTTTAAAGATCTTATGTTTTGATAACCATATCTATAAATTTGCATTAAAAAATATCTTCTTTCGATATCTTCGCATTGCAATAATTCTAATTCTATAAAATCTTGGAATATCTCGGCGTTTTCTATGTGATATTCTTTAGAGCTTGAGCCTTTTTCGGCTTTATAAAGCTCTTTTTTGTAATCATAAGCTTTTTTAAGCTTGTCAACTAATTTCATTTTAGCAACTCCGCGTTTTCGTGAATATTGCCCACAATTTTTTCATTCGCCTTTTGTATTTATTTCCAATAAAACATTATCATCTTTATCTACATAGGATATAGTTACTTCATCGCTATAATACCCATCCTGTTCCGAGTAGCAAGGTATAAAGAATGTTCTATTTTTATCACCAAATCTAAATCCATAATCATTTGGAATTATTTTAAATGTTTCTTCATCAAAATTATAATTAAGAGCATGTTTTTCTAATTGCTCCCAATCTGCGTAGTTGTGTTCACAACAATCTTGTTCGTGGTAATCATATAAAACATTACCATTATCAAAAACAATCCCTAAATCTATACCATATTCTGTAATTTTCATTTTTAATCCTTTCACGATAATACTAAGGCTGTATTAAATACTTTTTTACCTTTGTTGTCATTATTGCTATACGCCACAATTCCTTTCTCTTCACAAATTTAAAAATGCAAATTAAAGCGATAATTGCTATAAAAATTGCATAAGAAAATATTTCTTTTTTAGTTATTTTTTTTCATAAATCATTTTTGTTCCTTAACTTCTAATAACTCCGCTTTATTGTGTATATTTCCAATGACTTCGATATCTTTCATATCATTAATTTTTGAAAATAAATACAATGAAAATCTATCGTTTTCAGTTCTATTATATAGCTCAAACTTTTCTAAATTAGCTATTCTAAATATCTCAAAGATATTAATATCCTTGTTTATAGTTACAAAATAAAAAAGAGTTGTTCCTTGAAATGTTATGTAAGATACAATATCACCTTCATAGATCTTTTTACCATTTTTATCATAAAGTCCTGTAAATAATTCTATCTCTAAATTAGAATTATCTAAATCATCTAATTCAAATTCATAATCGTAACAATCTTGATTCCTATTTAAGCATTTAATATGGTCATTGATTTTGTGTATATAAACACCGCCTTTAATATTGTTTATATATTTCTTGCCATCCCAAACCCTAAAATCAAAATCACTTAGTTTCATTTTTAACTCCTTAATATTTTTTTCCATTTTTCTTCGCATTTTTCATAATTTTTCCAATAATTAAGCTCTTTTTCAAGCTTATTTAAAACAGTTTCAAACACTAAATTTTTACCTATTTTTTCAGCAAATAAACTCATTTCCCATTCTTTTATGCAAAGAATTCCATAATCTTTTGCTAAGATTTTTCTAAGCTCTAGCAATTCTTTTTGACTGAGTTTTCTTTTAAAACTTAGTTCATTCTTGTGTTCTAAGTCGTATTGTAAGGCTTTAATTTTGTTTTCATAATGTTCCTTTTGTTGTGCTAATTGTGATTTATAGCCGATTTTTTGATGATGATTTAAAGAATTAAGCCTTATATTTTCATCGCTTAGTGTTTTAAATCTAGCTTGTGTTTGCTCTCTTAAAAGCTTAGCTACTTTTTTGCGGTATTCTTTAGCCTTAGGACTTTTTATAAAAAAGCCTAGCATATAAACACCTTCTAAAGTCCATTTGATTACTCTTTGTCTTCCGCCTTTGGTTTGCGCATAATCGTAGAAATAGTGTATATTTTCTATGAGTTCATCAGAGTGTAAATTTTTGTGAGACATTATTGTAGTGTTATCTACTGCGTAGTTATATGCAACTTCTGTATTTAAAAAACTTCTAGTGATTTGACAAATTTCACATTGTAATAAATTCATCTTAAACCTTTCATTTTTGAAAATATTTAAGAAAATTATATATTATTTATGAAAGTTTGTCAATATATTTCATTCATTTTTGATAAATTATTCTAAAATATTTGCCAAAAATGAAAATAAAGGGTGTGGAAAATTTCCATATCCTTATAATTCTGATATTATTTTATGAGCTTTTTTGATTGTTTCTAGCTTTCGCTTTAATTCTATATTTTCAAGCATTGTTTTTAAAAAAAGTTCTGTAAGTCGTGGCAAATCTCCGCTTTTCCAACGTGCTATAGTACTTTCTGGGATTTCTAACATTTCGCTTAGCTGTCGTTGGGTAATGTTTAACTCTTTGCAAACCTTTTTAACAATGTTTTCTTCTGCATTTATCGCAAAATGCCATTCTATACAATAAAGATTTTCATCTGTTTTTGGATTTTTAAAAATTATATGATTTCCTCCTTCGTGACAAAAGGGTTGGAAACCTAATATATTTGTTATTTGTGGTAAAATTTCATTAATAATTTTTTTTTCATTACCTCTTTTTATTTCAGTGCTTAGCAAAATTTTATCTTTAAGTGTTCCATTTATGACTATTCTTTCGTTTGTTGTGCTATCTAATTTATAAACATCTAGTTTCATTAATTTTCCTTTATCTCATTAATTTCTTTTTTTATAGACCCAATAAACATACCACTGTCAAGATAATAATTTGGATAAGCTTTTTTAAGGAGATTAAACTCATCTAAAGAAACTAAAACCACATCAGTATCTCCTTTTTCTTTGGATATTTGTTCTAATAAATCATAATCCAATTGTGCTTTTTGAAAGCTATTCTTTTTATATCCACGAATCATTAAAGTGTTTTCTGTAATATTGAGTTCCACAATAAAATAATAATTTTTCCTATCTGTTTGTTTTTCTATATTTTTGCCTAAAATTGCCAAACCTGATAAAGTTTGTAAAATATTAAACTCGCTATCAAGTTTTTGTATCTTTTTGCATATTTCAAGCTTTGTAAATTTGCTATACTCTTTCAAGATATTAGTTTTTTCTATTATTGAAAATAAAGCACTACATAGTTTAAAAAATTCTTTATAATGTTCTTCACCTTCTCCTTGCTTTATTTTTGATTTTGTTTTCATTCCTAAAACTTCTACTGCTGTTGCCCAATTATGCTGCAACTGTGTTCTTATTTGTAGTTCTAAACATTTTTTTGAACCATCTTTGTATTCAAAAATTTGATGAATTGAACGATAACCATCTGATTTTGGTTGTTCAATATAATTACTTGTTTTTTCAAGCTTAAATTTTATGCTACCTTTTAAATAGGTATCATCCATTATTGTTTTAAACTCATTGACTTGCTCCATGGTTTTAAAAACAATTCTAACACCTGCTATATCTTGCATTCTATCTAAATTCATACTGCTAAAACGCTTTAACTTAATTTCTATAGAATTAAGTCTTTTAAGTCTTCTTGCTACAATTAAAGCTTTTAATTTATGTTTTTTTAGTTTTTTGTTAATAGAATTAACCATACTAGTCATAATAGAAATATGAATGCTACGCCAATTTGATATTATTTCATAATCTTTAAGAGTTGCTATGTTATTTCTAATATTTTCTCCAGCTTTTCTAACTTGCTGTTTTGTAACTTCAGTATCGCCCATAATATCTCCTATAATTCATTAATCCATTGTGTTATATTTATCCTTTAAACCCCATTTATTGCAAATTAAATTTAAATCCGTATTTGTCTTTAAAAGTTCATCAAAATAAAGCTCTAGTTTATCAATATAAAGTCTAGCGCCTTTTAAATCATCATTTTGTATATTTTTAATTGCTAGATTTTTACTATCTTTGATAAGTCTTTGAAGATCATCTTTTTTATCTTTAAGCTCAGTTAAACGACCTCTTGCGTAAGTAATTGTTTCTTCTTGCATTTTAATCCTTTATCTCATACAAAATTCGATTAAATCATCAATATCATTTAAATCATTTTTAGAAAAGTATAAATAAGCTTTAGGACTGATTAAAACTCCTGAAAAATCGCCATTGTTTTCTTTGTCGTATTTTAAAACTTTGCATTCTTTTAGAAAATGAATACAAGAGCTAAAGTCTATTTTATATTCTTTACAATCTTTGTTAAAGTCATCTGAAAAAAGTATGCTTTGATTTGGAAAATCATTTAAAAGTGTTTTTATAATACGTTTTGAAATAAGCTTAAAAGCTTTTAAGTTTTCCATTATTTCTCCTTTATTTTATTTTATCAAAATTTTACTTAAGCAAATAGACTTCTTTCTATATGTTTAAACATAATTTCATTTATAATTTATGAAATTGCGTAAAGCATATATTATCTGTATTCATCTGCTCTGTTATAGTTTTTGAAGCATATTTGTGGATACTAATAATATCTACTTTTTGCCAAAAAGGTCTTGTATCTGTAATAATTCTATTTCCACTAATAGTTTTATCATTAACTATGCATTTAAAAGAAACAAACCAATAGGTGTTAATCTTTAAAAAATCAAACATTTTTACTCCCTTTAAAATTTTAATTATTTAAAAAATCCCCCTAATCATTTTTTTTCACTCCTTAAAAATTTTTCAACATCTTCAAAAGCTTTAACAATAAGCTTTTTTTCATGAAAGAAATTTCTTCCGCTTGGCTTACTTTTGTAAATTTTGTAAGCCTTTCTGAGTTCTTCTTTACTTATGTAGTTTTTCCAATTTATCTTCTCAATTTTTATTTCATTCTGTTTTGCAAAATCGCAAAAACAAGTTCTTCTTTCACTAAATGGTATAATTTTTACAATTTCAAGATAATTAGAACGGCAAACTTTCATCATCATCTCCTATTTCGATATATTTTTCATTGTTATTGTTTTTTACTTCATTTCCATAAGGATTATAGCTTTGATTTTCTTTTGGAATAAATGATTTATTATTGTCGTTATTTAAAGATTTATGCCTTGCTTTAAAAGATTTTATAGATAAAGGCTCTTTATTATTTTGAAACTCATCCATGTTTTGCATTTTTTCATTAAAAATTCTATCAAGAAAGATTTTGTTAGCAAGTTCTCCATTTTTACTTAAATATTCTTCTGTTCCAAAACCTAAAACTAAAAGTTTATTAACTAAAGAATTTAGATAAATAACTTCAGTCTGCACTCCAAAAACATTCTCATTTCCCTTTTCGCTAAAATCAAGTTCATCAATTCCAAAGAATTTCATAATAGCGTTTAATTGTCTAAATCCTAAATAATTTTCTTTTCCTCCATTTTTATTGATATAGCTAAAATCGTTATTTTTAGCTACAAAAAGATTAAAAATAGCTAGTTTTTGCTCTTTTCTGGTTAAAAATTCAAAACAAATAAAAGTATTATTGCTTCCATCGCTTGCCAATTTATCATATAAAAAGGCTTTGCGGAAAACTCCGCTATAAAGCCCACCTTCACTTAAATACTCTACGCTTGGCGAATAATTTGCCACTTCAAAACTTGCCTTAAATGCTGGTAACATTATAATCCTCCTTTTAATTGTGTTAAAAATTCATCTTTATTACTTAGAACTTCTTGTATTTTTTCACTTGTAAATAAAGAATGTTTTTTTATAAAATTGTTTTGCTCTTGGGTGTTTAAACCATTATCACTCATAAATTTTCTAAGTTCAGCACCTAAAGCTTTTATCTCTTTTGCTTTATTTTCTAAAGCTATTTTTTCATCACTACTCCAAACTTTTAAATCTTCATTTGGATTTAAAAATCGCTTTTCCTTTATTGTTTCTAATTCACTCTCATCAAGCATTCCAAGTCCGCAAATACTTAAGGTTACACGCCTTTTTGCTTTTGTGATAGCTTTCATTATTGCGTTTGCTAAATTATCGCCACCTAAATTTTTAATATTTAAAGCACCTGTATCGCAATCAGTTCTTCCATCTGGTGTTGCTGCGTAGGCTGTAACCATATAAATATCGCCAACTTGTGCCACTTCTGTTTTTGTAATACTTACTTTTCTTATTTGTCTTAGCTGATCTGTTGCTGATTTGTTTGCGTATAAAGTAAGTTTTCCGTTTAATACTATGTATTCAAAAGGCTTTGTAAGCATGTTTAAACCTAAACTTTCACAAAGATTTTTAACATAACTCGCTCGTTCTACATCACTAAGTTTTGATAAATCACCTTTTACCAAAGCCAACTCATAAGGATTAAAATTTATTTCTAATTTATTTTCTTCTTTTAATACAACTTCATTACTCATTTTATGCTCCTTTTTTGATTTTTAAACACATTGAAATACTTTCTTTATAAAACTCTTTAGGCACAGTAATATTTTTTTGCTCTAAAAAGCCCTTATAATCAATTGTAGTTCTACTTTGCGGATAAATTGTAATATCCAAACATCTTGCTTTTTCTCCATTTGCTAAGGCTATGAGTTCTTTTTTAAGACTTTCTAGCTTTTCTTTAATAGGTTTAATCGTGTTTTCAAGCCTTATAATTTCAATCGTTAGATTTTTTGCTTTAGTATCTTCAAGCTCTTTATATTCACTTTTTTGATTTATGATATAATCTAATATAAATTGCTTTATATTTTTAACCAACCATTCTTGATAAGCTTCATCTTTTGAAACTTCGCACTCTACAATCTCTTCTTCTTTATTCATGGCTACAAATATACATTTTTCTTTACCGCTGATATAGAGTTGAAATTGTACTTGAGCGTAGTATTTATCACTTGGCTTTTTATTTTTTTTGACAAAATTGTATTCATCTTGTGAGTATTTAAACTCGTAAATAACCCCATTTTCATCAATACCATCTAAACTCGCTATAAACATTTCATTTTCTAAACTTTGTAAAACTATAGGAGTGATACTCACAGAATGTAAAAACTCAACTCTAGCTCTAATCAAAGCTTCATAATCATTGCCTTTTTTCATAGCTTCATTTTGATAAACTTCTTTAAGTCCTAAAATGATATCTCTTGCTTCTTCTTTGGAATTAAAAGCACCTTTGATACCTACACAAGATGCTACCATCGATGCACCTATTTTACCTTTTCTAAAATTTAGCCATTCAGGGCTACCTTGTTCTAAGTCAATTATTCTGCAATTCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP015209|880077:889991|886561_886816_-|WP_065453871.1|DBSCAN-SWA
MQEETITYARGRLTELKDKKDDLQRLIKDSKNLAIKNIQNDDLKGARLYIDKLELYFDELLKTNTDLNLICNKWGLKDKYNTMD
>NZ_CP015209|880077:889991|881965_882226_-|WP_079851622.1|DBSCAN-SWA
MKIIILENGIKLIIKVTGYKMLNIILVLLFILFFILMFFNYKYQKAQVELLEQNKKTLELNIKILELNIKKIELLEKRIKELKWEF
>NZ_CP015209|880077:889991|885511_886543_-|WP_052790057.1|DBSCAN-SWA
MGDTEVTKQQVRKAGENIRNNIATLKDYEIISNWRSIHISIMTSMVNSINKKLKKHKLKALIVARRLKRLNSIEIKLKRFSSMNLDRMQDIAGVRIVFKTMEQVNEFKTIMDDTYLKGSIKFKLEKTSNYIEQPKSDGYRSIHQIFEYKDGSKKCLELQIRTQLQHNWATAVEVLGMKTKSKIKQGEGEEHYKEFFKLCSALFSIIEKTNILKEYSKFTKLEICKKIQKLDSEFNILQTLSGLAILGKNIEKQTDRKNYYFIVELNITENTLMIRGYKKNSFQKAQLDYDLLEQISKEKGDTDVVLVSLDEFNLLKKAYPNYYLDSGMFIGSIKKEINEIKEN
>NZ_CP015209|880077:889991|887455_887722_-|WP_065453873.1|DBSCAN-SWA
MKVCRSNYLEIVKIIPFSERRTCFCDFAKQNEIKIEKINWKNYISKEELRKAYKIYKSKPSGRNFFHEKKLIVKAFEDVEKFLRSEKK
>NZ_CP015209|880077:889991|883734_884208_-|WP_065453864.1|DBSCAN-SWA
MKLSDFDFRVWDGKKYINNIKGGVYIHKINDHIKCLNRNQDCYDYEFELDDLDNSNLEIELFTGLYDKNGKKIYEGDIVSYITFQGTTLFYFVTINKDINIFEIFRIANLEKFELYNRTENDRFSLYLFSKINDMKDIEVIGNIHNKAELLEVKEQK
>NZ_CP015209|880077:889991|885032_885260_-|WP_032595721.1|DBSCAN-SWA
MNAEENIVKKVCKELNITQRQLSEMLEIPESTIARWKSGDLPRLTELFLKTMLENIELKRKLETIKKAHKIISEL
>NZ_CP015209|880077:889991|888397_889135_-|WP_065453876.1|DBSCAN-SWA
MSNEVVLKEENKLEINFNPYELALVKGDLSKLSDVERASYVKNLCESLGLNMLTKPFEYIVLNGKLTLYANKSATDQLRQIRKVSITKTEVAQVGDIYMVTAYAATPDGRTDCDTGALNIKNLGGDNLANAIMKAITKAKRRVTLSICGLGMLDESELETIKEKRFLNPNEDLKVWSSDEKIALENKAKEIKALGAELRKFMSDNGLNTQEQNNFIKKHSLFTSEKIQEVLSNKDEFLTQLKGGL
>NZ_CP015209|880077:889991|881435_881978_-|WP_052801390.1|DBSCAN-SWA
MGILKRLDKTIIIENDRKSEKELVEYCILEGISLNDANLENINLSGLDFNNAFINGASFKNANLNDISSKNTSFIDCDFSGASFHFCNFLRTEFENCIFENVDLRDCIGDMKNIFSVVLDTYVMTFTKTMMNLGCDTKTIKEWRNLSVDDLEGEEQKWLWNYYKDTIFEIIDKRLGVEND
>NZ_CP015209|880077:889991|886825_887119_-|WP_002873572.1|DBSCAN-SWA
MENLKAFKLISKRIIKTLLNDFPNQSILFSDDFNKDCKEYKIDFSSCIHFLKECKVLKYDKENNGDFSGVLISPKAYLYFSKNDLNDIDDLIEFCMR
>NZ_CP015209|880077:889991|887198_887411_-|WP_052783907.1|DBSCAN-SWA
MFDFLKINTYWFVSFKCIVNDKTISGNRIITDTRPFWQKVDIISIHKYASKTITEQMNTDNICFTQFHKL
>NZ_CP015209|880077:889991|887702_888398_-|WP_065453874.1|DBSCAN-SWA
MLPAFKASFEVANYSPSVEYLSEGGLYSGVFRKAFLYDKLASDGSNNTFICFEFLTRKEQKLAIFNLFVAKNNDFSYINKNGGKENYLGFRQLNAIMKFFGIDELDFSEKGNENVFGVQTEVIYLNSLVNKLLVLGFGTEEYLSKNGELANKIFLDRIFNEKMQNMDEFQNNKEPLSIKSFKARHKSLNNDNNKSFIPKENQSYNPYGNEVKNNNNEKYIEIGDDDESLPF
>NZ_CP015209|880077:889991|880077_881277_+|WP_065453860.1|integrase|DBSCAN-SWA
MLNDTKIKALKAKDKKYYIADFDNLLLCIYPSGKKTFIFNYKCPKTLRYKRITLGEYPTLNLANARKQRDNLKVNLAENDSIREKSEITFKELALEKMDLKKLELSEKTYKSYMSYLQRFAFGIYGEIILDKLQIKDILKSFEKFRKENIREGADKFFTLLNEIFRHGVIKEYIKSNPIANLNRKELLINKASKNHATLLETKEIKALIDNIIDYKGYISVKIAAMFSLLTAQRSFSIRSAKWEDIDLDNGVWYIPQEDMKMKRAHTIPLNSQCVYMLKKYKEMSINTGYLFYSLRSKSEIISDNTIRSMFRRMGYSNDDFTPHGFRAMFSTLAHENRNKHQMSSDIIELCLAHVEKNKIKSAYNHALNLKEKAILMQWWGDYLDEIADLNQQVRNIFL
>NZ_CP015209|880077:889991|881203_881443_-|WP_002861629.1|DBSCAN-SWA
MIRLDIGDYYTRKEVANLLKVKEPIVHKYAKQGKFREFKQHRNCSGLYPKHDIENFIKKYFGLVDLDQQSHQDNLPTTA
>NZ_CP015209|880077:889991|882167_882833_-|WP_002896772.1|DBSCAN-SWA
MTEIQFNEIKERLADWRSERGLTYENQREEFLGNVFEKVSEYFRAKDDLERVEALCDIAVFFFNAFELKFGEISNIKRAGMIHLIDHFTSYFIEHNNKTVYNNSKDEDFEYLLIVEIEILVKNLGFDFYKCMLEKIKEIESRTGFYDERLNRFVEKIGAYYEREAFDLAINDFKLTNVPNKYFLDKEGSDFWCIRIEDNNGDYEDYYIRKWYKADYKSYRL
>NZ_CP015209|880077:889991|884210_884888_-|WP_065453869.1|DBSCAN-SWA
MNLLQCEICQITRSFLNTEVAYNYAVDNTTIMSHKNLHSDELIENIHYFYDYAQTKGGRQRVIKWTLEGVYMLGFFIKSPKAKEYRKKVAKLLREQTQARFKTLSDENIRLNSLNHHQKIGYKSQLAQQKEHYENKIKALQYDLEHKNELSFKRKLSQKELLELRKILAKDYGILCIKEWEMSLFAEKIGKNLVFETVLNKLEKELNYWKNYEKCEEKWKKILRS
>NZ_CP015209|880077:889991|882838_883189_-|WP_002875041.1|DBSCAN-SWA
MKLVDKLKKAYDYKKELYKAEKGSSSKEYHIENAEIFQDFIELELLQCEDIERRYFLMQIYRYGYQNIRSLNSKLAFKAKLDNDDINFIKILKEANILHALNEIYTTKEVKKIAKD
>NZ_CP015209|880077:889991|889136_889991_-|WP_065453878.1|DBSCAN-SWA
MNCRIIDLEQGSPEWLNFRKGKIGASMVASCVGIKGAFNSKEEARDIILGLKEVYQNEAMKKGNDYEALIRARVEFLHSVSITPIVLQSLENEMFIASLDGIDENGVIYEFKYSQDEYNFVKKNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVECEVSKDEAYQEWLVKNIKQFILDYIINQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCLDITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
875876:875890	attL	NA	NA	NA	NA
WP_065453860.1|880077_881277_+|integrase	site-specific integrase	X2KXI6	Campylobacter_phage	7.6e-45	33.2
WP_002861629.1|881203_881443_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_052801390.1|881435_881978_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_079851622.1|881965_882226_-	hypothetical protein	NA	NA	NA	NA
WP_002896772.1|882167_882833_-	hypothetical protein	A0A1D8EXE5	Campylobacter_phage	3.7e-49	52.5
WP_002875041.1|882838_883189_-	hypothetical protein	NA	NA	NA	NA
WP_065453864.1|883734_884208_-	hypothetical protein	J9SPF1	Campylobacter_phage	3.2e-15	40.5
WP_065453869.1|884210_884888_-	antirepressor	M5AAE8	Nitratiruptor_phage	7.8e-15	34.0
WP_032595721.1|885032_885260_-	helix-turn-helix transcriptional regulator	M5A9C2	Nitratiruptor_phage	8.1e-09	43.8
WP_052790057.1|885511_886543_-	RelA/SpoT domain-containing protein	A0A1B0VBT5	Salmonella_phage	1.6e-27	29.3
WP_065453871.1|886561_886816_-	hypothetical protein	NA	NA	NA	NA
WP_002873572.1|886825_887119_-	hypothetical protein	NA	NA	NA	NA
WP_052783907.1|887198_887411_-	hypothetical protein	NA	NA	NA	NA
WP_065453873.1|887455_887722_-	hypothetical protein	NA	NA	NA	NA
WP_065453874.1|887702_888398_-	hypothetical protein	NA	NA	NA	NA
WP_065453876.1|888397_889135_-	hypothetical protein	NA	NA	NA	NA
WP_065453878.1|889136_889991_-	hypothetical protein	A0A0K0MD53	Pseudoalteromonas_phage	5.8e-07	24.9
890499:890513	attR	NA	NA	NA	NA

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP015209|908770:917188|DBSCAN-SWA
AATGGCTTTACCATCAATGGGACATACCCCACCCGCAACTGAAAATGTTAAGTTAAAACAATCAATATATGAAACGATTATTAAAATTGGAGCTACTGAAACACCAATTTTAAATAAAATAGGTACTTCAAAGGTTACAAATCCTTTAACTCATAGTTGGATTACTGATACTTTTGAAGAACCAAAAAAGAATGCGAATTTAGAGTTAAGCAAATTTGTAGGTGAGACAAAAAACACAGCTCAAAAAACTACCAATGCTACTCAAATATTCATTACCGAAGCCATGGTATCAAAAGCTTTGTTAAAAGCAAACCAATATGGTGGCAATGAAATGGAGTATCAAATCGGCAAAAAAACCAAAGAACATAAAATGGATATGGAATATGCTTTATTTGGTCTAGGCAGAGATAGTGATGTAAAAAAATCAGTTTTCAAAGATTATGTTCAAGCACAAGAAGCAACAAGTGGAGAAATGGCTGGACTTTTTCATTATATCGCTAAAGGAAAAGATAGCTTTGCTGATGGAAAGCGTGGAAATGTATTAGCTTTTGATGAAACAGGAGATTGGAGCGGAACTGCAACAGAACTTACAGAAGATAAACTTAATCAAATTTTGCAAACCATTTGGAATAGCGGAGTGACGCCTAAAGATGTCTTTTTAGGAGCTGACTTAAAAGGAGCTATCAATAAATTCGCTACAAGAATTTTAGGCAATGAAACAAAACTAGCAGGACAAGTAGTGAGCCTTGAAACAGATTTTGGAACGGTAAATTTCCATATGCATAGATTATTAAGCCCTAAATATGGTTTGGGTGATGTTTTAATTGCTGGGGATTTTGAGTATATGAAACATGGGCTTTATATTCCTACTATGATTGAAGATGTTCCAACTGATATTACTGCAAAAGCAAAAAGATTTTATACACAAAGCACTTTAGAAGTAAGAAATGCTGATGCTTTTGCTATAGGCGTGGGATTAACTAGTGGAAATAATGCAAAGGCTAAAGCGGTTTTAAAAGCAGCAAAAGGTGCATAATGCTTTGTGCTACGGCTAAAAAACTCATTATCGCTAAAGTTAAAAATTCTTACAAAATGATAGAAGATGATGAAGTTTTGAAAGCCTATTTTATGGAAGCATTTTATTATATTTTATCAAAATGTGTTCCTAGCGTTCTTTTAAAAAATGTAGAACAAGGCGAAAAAGTTTTTAGGCAAGTTAGAAATAATCATTTTTTGATTATTCCTGATGAGCCTGATTTTGACAATGAAAAAGAACATTTAATGATAGATGAAACACTTAGTTTTGCTGTGATTAATTATGTTTGTTATTTGATTACAAGATGCGAAGAAAAAGACTTTCTGGCATTATGTGACAAGATAATTTATGAGTATATAGCTAATGATGGCAAGGAGCTTGATGATGAAAGAACATGGTTGTAACCCTAATTTCACAAAAAAATTTAATAGAGCTTTGAGTTATAAAGACTATATACAAAGTATAAATAGTGCTGATTTTATAGCTTATTTAGATGATAAAAAATGGCTTTTAGCCATGGATGATCTGCTTTTCTTTTGTGAAAAGAGAATTAAAGATAGTGATTATTATGAAGGTTAAAAATGGGAACAAGCTTAAATGAATTAAAAACAGGTAGAGAAAAACTTGAAATCATAAATCAAGTTTTAGCTAGAATAAACAGCATTTCAGAAGCAATAGACAATACAAGACTTGATGAAGTTGTAGGCTTAAAACAAGCTTGCGAATCTTTAAAAAATGAATGTTTAAAATTTAAAAATGATATTGTAGATAAAAATGATGATATTTTAAGCAAATATGATGATATTAATAAAAAATATTCAAATATAAGTGAAAAATACAACAATGTAAATGCAAAATTTGATTATATTAAAGAAGCGTATGAAGATTTTTCTTTAAATAAACAAGAAATACAAAACATTAAAGATTTTTTAGAAAATAATACAGAAGAATTTGAGAATTTAAAAAAAGATATACAGAAATATGAAGAAATAAAATTTAATTTAGATAATTATATTAATGAAATTAAACAAAATAAAGATTTTGTAAAAGAATATTTTGATTTGAACACAAAAATTAAAGATGAAATTTTAAGTGAACTTAATCATGCTTTAGAAATTGTAGATAGCTTACATTTAAATGTTGATGAATTAAAAGAAATAAAACCTGAATTAATAAGTATTAAAAAAGAAGTAAAAGATTTAGCAAATGAAGCAAAATTAGTAGTAAGTGAAGCAAGCGAAATTATAAAAAATAAAATTAACACTATATTCTTTGAAAACCAAAGATTAAATCAAGAAATGATAGATAGTGTTAAAAAGCTAGAAGAAATTAAATTTGATATTGGAGTTAAATATAAAGAAATAGCTAGTGCATATGAACTACTTTTAGAAAGCAAGCAAAATATAGAAGATTTAAGAGAAGTTATAGCTTTATATAAAGAATTTGAAAATGATATAACATCTTATTCCCAAATTATAAAAGATTTTAAAAGTAAAATAGAAAATTTAGAACGAGATTTAAAATCACAGTCTGAAAGTATCTACTCTTCTTTAAATGATAAACAAAATGAAATATTAAAAAAATTAAATGAAGTAAAAAATGAAGCTTTAGTTAAATTTGATGAACTTACAGCAAAATGTGAAGGGTATAAAATACATTTTGAGCAAAGTTATGATAGGTTTAATCAAAGAGCTTTGATAGCTAATGAAGATTTAGGTAGGTTAGCTGAAGTTGCTAAAAAAGAACTAGGTAATGATAAGTTAATTTATGAAACAGAATTAAAAGTTTTAGCTGAAGAAACAATAAAACAAATGGAAGAAATGCTCAAAGGTTTAAGTGATGAAAGAAATGAAGTCACAGAGGTTTTTGAAACTCAAAAGAAAGAATTTACTACTCTTGTAGATACTTCTAAAGTTATGATTGACAACTTAAATCATATTTTTAATGCGAATTATCAAGCAAAGAAAAATGAGTTTAGTATTATTTTTAATGAAAAATTGCATAGTTTAAACGAGAATAAGCAAGATTTTTTAAATGAGCTTGTGAGCGCAAAAGAAAACGGACTCAATAAAATAAATGAAACAAAAGAGCAAAGCCTTAATGAAATAATCCAAACAAAAGAACAAGGACTTAATGAGCTTGAAACTAAAAAAGGTGAGTGCATAGATGAGATTGACAATCAAGCAAGAATCTATGATATAAGTGGTGTTAAGGCTAATGTTGAATATCTTCTTTCTTTGCTTAATGAGAAAGATGATAGTAAAGATGATGGAATTAAAGATGAAATTGCAAATATAGAGCAAGGTATAAAAGATAAAGAACAAGAGCTTGAAGAGATAAAAAAGCAAATTGAAGAAGCTTTAAATAATAATGATGAATTAAAGCAAAAAAATGAGGAATTAAAGGAAATTAAAAATCAAATCGATGAGGCTTTAAGTCAAGAACCACCTGCTGATACAAGCGAACTTGAAGAGAGAAAAGAAGAACTTGAAAATCAAATTGCTGAGCTTGAAAAAGAGATTGCTGGTGAATTAATTAACAAAAAAGAGGAAATTGAAAAAGAACTTGAAGAAGCTAATCAAAACTTAGAGGACAAAAACAATGAGTTAGAGCAAAATGAAAAAGATAAAAAGCTAATTACACAAAAAGTATTAGATATAACTATTAAAACTTTAGAAGCACTTATAGATACAAAAGTAAGTTTAAATGGCGATGAAGAGATAAATGGAAATAAAACTTTTGCTAATCCTATTTTAGTAAAAGTAGATCCAACTAATGATAACCATTTAACAAATAAAATCTATGTAGATACCGCTTTAAATACAAAAGCAAATTTAAATGGAGATAATATATTTAATGGCACAAATATTTTTAATAAGGCATTAACTTCTCCAATCGATCCAACAAATGATAATCACTTAACTAGAAAATGGTATGTAGATTATGGTGGTGGAATTAAAAATCTTGGCACAACTGGCAGTATAAATCTAGATTTAAGACAAGCTCAACATTTTATTTTAACAGCAAATGCAGGAACAAGCATAGGAATAGCTAATTTTGGAGGAGTAGGAAAAAGCGGAACAATAACCATAAATAATTGTCAAAATGTAGTAGCTTTTAATGCCCCTTTTAAATTTAGAATAGCTCAAAGTGGATTTAGTAGCACTGAAACTTTTGCTTATTTTTGCATAGCTTCGAATAATGTAAGATTAGTAAGGACTTAAAATGAATTGTCTCCTTCTTTCTAATAATGGTATAGCACTAAATTTACCTCCATCTTTAGGAGGCTCGGTTGCAAATTATAATTATATGTTAAAGCTAGACATGATTTATAAACAAGCAGTGGTATTGCCATCAAATATTAATAATAAAGAAGTGGTTATGTTAGGCGAAGTTTGGACGACTGGAAATATGTCTAATAAAACTTCTGGAAATACTTTAGAAATAACTTGGAATAATTTTAATTCAAAAGTAACACTACATGCTTTAAGTAAATATTACACTGCCAATGCAAAAATCAAAGTAGAGAAAAAATTCAATTTTGGAAATATAAATAACTTACAAATAATACTAAGTTCTTGGCAAAGCGGTAGTGCAAATGCAAGTGCTGGTTGGAACTTAAATGATGGGGATAGATTAAACCCAAGAGCAAATTTAACATTATACTGGAATTAAGAAAGGGTAAATATGTTTTATGATTTAAAAAATAAAAGTTTAAAATATGATGATATTTTTTTAAAAGATGTAAAAATACAAAACGAAGAAGGTGAAATTGATGCACAAGATACTTATTTTTTAAGTGCTTGCGATGATAAGCTTTTAAAAGAGCTTGGTTTTGCTAAAGTTAAAGAAGAAGAAATCCCAAGTTTTAATGAAAAAATTGAAGAACTTCGCCAAATTCAAACTTATGATGAAGAAAATAATCTTTATATTATTTCTTATGAGATTAAAGAAAAAGCATTAGAAGAGTTAAAAGAATTAAAATTAGAAGAACTAAAAGCTATAAAAGAAGAAAAGCTTTTGTTTATGCCTTTTAAAAATACTATATTTCAAATTGACACGGAAGCAAAAATTAATATTAGCGGAAAAGTTAGCGAGATAATGTTAGCAAATCTCAATAATACTCCTTTGGAAAATATTGCTTGGATTGATAAAGATAATAAAATCACTACATTTAACAAAGAAGAATTTTTAGAATTTGGGGTTGGTATCGCTAAATATACTGAAAGTATTATTTTTAAAAATGATGAACTAAGAAATAAAGTGAAAAATGCCACATCTTTAGAAGAATTAAATTTAATTGCATGGGAGAGTGAAAAATGAGTACTGAAAATATAATAAAAGAAGGTGCTATACTCGGTTCTTTAAGCGGATCAGCATTATTAGGATTGATGGTTTTTGTCTTAGCTGGGATTGCATGGCATTTATATAAAACTTTACATAAAGAAGCTGGGGAAAGAACAAAAGAACTTATAAGTGAAACCAAAAATACTAATGTTCTTATTAGAGAACAAATTGCAGTATCCAGAGCAAGTAGCGATAGTTTGGTTAAATTTATAGAAACACATTGCTCAAAAACCAATGACAAGCTAGAAGCTATAGAAACAGATCTTATGAGAATGGATGAAAGGCTTGTTAAGCTTACTCAAATAAGAAATGATGAATTAAGAAGTATTTTTAAAAAAAAGGAAAACAATGACTAAAACAGAATTAAAAAGGGTTTGTGTAAAACCTTATGATAAAGATAGATTTGAAGTGATACAAGATTATGAGTTTATTTTACCAAACTACAAAGGAGTTGTACCACAAGGCTTTAAAACAGATGGTGCAAGTATCCCACGCCTTTTTTGGTCTTTGTTTCCACCTTTTAAAAGTGAGTATTTTAGTGCTTGTGTAGTGCATGATTTTTTATGTGAAAAAGCAAAATCAAGAAAAGATTACAAACTTGCTGATCTTGTTTTAAAAGAAGCAATGCAAGCTTTAGAAATAAATAAATTTAAGATTTTTGTTTTTTATTGCTCTTGTAATTTATTTCATCAGATCAAATGTTTAATAAAGGGGATAAGATGAGTTTAGAACAGGTTATAAATACTCAAAATGAAAGTTTAAATCAAATTATAAGTAGTTTACAAGAATTAGTTTTAAGTTATAAAAATGGTAATTTGAGTTTAGAAGATGTTAAAAAATTAATTAACGAAACTATTGAAAATATATCAAATGATTATATAAAAGAAAGCGAGCTAAAAGAAAAACTAGAAGCCTTGCTAGAAGAACTTAATATCAATGCAAATATCAATAAAGAGAGTTTAAAAGAAGTTGTATTAAAAGTTGTTTTAGAAAATCAAGAAAGTTTAAAAGGTGATAAAGGAGATCCTTTTACTTATGAAGATTTTACAGAAGAACAGCTTGAAAATTTAAAAGGGCAAGATGGAGCTAAAGGAGCTGATGGTAAAAGTGCTTATGAACTTTGGCTTGAAAATGAAGAAAACACGGGAAAAAGTCAAGATGAATTTTTAGCAAGTTTAAAAGGTGATAAAGGGGAAGATGGTGATAAAATTAGCGATGAAAAATTAAGGAAAACCTTAGAAGAAGTTTCTAAACCCTTGCTTGAAGAAAGTTTTCATCAAGTAGGAAATACCATAAATAACACTTTAAGTATTATTTCAAATGCTTTAGAAAAAAATGCTTTGCTTTGCAATATCACAAACACACCTCCACCAGAACAAACACAAACAAACAATGGTTATAAAAAAGGATTTATTTGGATAGACAATTCAAAAACTCCAAACGATATTTATGTAAGTGATTTTACCTCGTGGATTAAAGTAGAGCTTAGCAAAGAACCAGAAGTAAATAGACTTAGATTAACAGTACAAACAGCCTTACGAGGTGGGTCTGTTTGCTTAAGTGATGTTAGGTTAATAAAGGAAAATAAAACTGCTATTTATGCTAAAAATATTCAAATAGACAAAGAAAACAAATCTGCCACAGGCTTATATGATATAGATGGAAAAGAATATGAAGTAAGAATAAGTTCTACAATCAATGCTGACTATGGTGATTACGATTTAATTACGGGTGGTTATATTTGTGGAACAAACTTAGCGGTTTCAACACCTTATGAATACATTTTAGATTTTGATAAACCTTTACCAAAAAATATCATCGGTATTGCTGCAAGACCAACAGGTTATTCTCGAAATTTTTCAAGTTATTTAAATATTGAAGCCTATGTTTCTTCTATAGGAAAACCTTTGTTTAGCTTAAATTTTACAAATTCATATTATAGCGATGCAATAGCAAGAGATTATGCTTTAAATATTAGAGATGGAAGTGAGATAACTTTAAATTAAAAAAGGAGAAAAAATGAAAATAACAATTAATAGAAGATATATAGGTAAAACTTGTGTTATTGGTAAATTTAGAGTTTTTGATGATAATGAAAATATACTTTTAGATTGCTTTTCTTTAGAAGAAGATAAAGAAGGCTTAGAAAGAGAACAAGATTTAAGAGTTCCAGCTGGAATTTATAATCTTAAAAGACACGTAGAATCAAGTTTTAATCCTAAAGGCAAAAAAGAAGTAGCAGGGGTTAAAGTTTTAAAGGATGATGATAGCGTTATTAATATTTTTAATAATGATGTTCCTTTTAATAGACGTATTTTAATCCATTGGGGAAACACTTATAAAGATACAAAAGGTTGTATCTTGCTGGGGCTTACTAAAGATAATAATAATGAAAGTGTCGGTCAAAGCAGACTAGCTTGTAAAGAATTTTATGATTTGATGTATGGTAAAAATCTTGAAGACATTAAATTAGAAATAACAAATGAATTAGCATGAGTTCTATATTTTCATATATCCTAGGAGATAAAAAACTTTATATTGCTTTAGTACTTATGACAATTTTAGCAGGATATTTTTATCTAAGACTTGATAGCACAAAAGCAAAATTAGAAAAAAGTCAAAGTGATTTAGCTTTGGCTTTAAAAATAAATGAAAATAATCAAGAAAAATTAAAAGAATTAAATCAAATTCATAAAACAGAATTAAAGGCTTTAAATGAAGCAAACAATCAAAAAAATCAAGTACAAGAAAGGGTGCAATATGTTAAAGAATATATTTATAAAAGCAATGAAAATAATATTACCAAGCTTTTTAACGATGTCGTTGATAGGTTGTGGGATGCAAACTCAACAAGTAGTAACCAAAATAGAAATTCAAAAAGTAAGAATTCCGCAAGAACTACTAACATTAAGTCCTCTTGAAAAGCCAATAGCAAAAAATGAACTAGATATTTTAAATGCTTATTCTATGCTTTTTTACAAATACAAACAGTGTGAAATTCAGATAAGCAAAATAAAGGAGCTAAATAATGAGTAA

Protein sequences of DBSCAN-SWA_2

>NZ_CP015209|908770:917188|909804_910209_+|WP_002861675.1|DBSCAN-SWA
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYIANDGKELDDERTWL
>NZ_CP015209|908770:917188|916990_917188_+|WP_002781772.1|DBSCAN-SWA
MQTQQVVTKIEIQKVRIPQELLTLSPLEKPIAKNELDILNAYSMLFYKYKQCEIQISKIKELNNE
>NZ_CP015209|908770:917188|914500_914875_+|WP_021358083.1|DBSCAN-SWA
MTKTELKRVCVKPYDKDRFEVIQDYEFILPNYKGVVPQGFKTDGASIPRLFWSLFPPFKSEYFSACVVHDFLCEKAKSRKDYKLADLVLKEAMQALEINKFKIFVFYCSCNLFHQIKCLIKGIR
>NZ_CP015209|908770:917188|910386_913029_+|WP_065453892.1|DBSCAN-SWA
MGTSLNELKTGREKLEIINQVLARINSISEAIDNTRLDEVVGLKQACESLKNECLKFKNDIVDKNDDILSKYDDINKKYSNISEKYNNVNAKFDYIKEAYEDFSLNKQEIQNIKDFLENNTEEFENLKKDIQKYEEIKFNLDNYINEIKQNKDFVKEYFDLNTKIKDEILSELNHALEIVDSLHLNVDELKEIKPELISIKKEVKDLANEAKLVVSEASEIIKNKINTIFFENQRLNQEMIDSVKKLEEIKFDIGVKYKEIASAYELLLESKQNIEDLREVIALYKEFENDITSYSQIIKDFKSKIENLERDLKSQSESIYSSLNDKQNEILKKLNEVKNEALVKFDELTAKCEGYKIHFEQSYDRFNQRALIANEDLGRLAEVAKKELGNDKLIYETELKVLAEETIKQMEEMLKGLSDERNEVTEVFETQKKEFTTLVDTSKVMIDNLNHIFNANYQAKKNEFSIIFNEKLHSLNENKQDFLNELVSAKENGLNKINETKEQSLNEIIQTKEQGLNELETKKGECIDEIDNQARIYDISGVKANVEYLLSLLNEKDDSKDDGIKDEIANIEQGIKDKEQELEEIKKQIEEALNNNDELKQKNEELKEIKNQIDEALSQEPPADTSELEERKEELENQIAELEKEIAGELINKKEEIEKELEEANQNLEDKNNELEQNEKDKKLITQKVLDITIKTLEALIDTKVSLNGDEEINGNKTFANPILVKVDPTNDNHLTNKIYVDTALNTKANLNGDNIFNGTNIFNKALTSPIDPTNDNHLTRKWYVDYGGGIKNLGTTGSINLDLRQAQHFILTANAGTSIGIANFGGVGKSGTITINNCQNVVAFNAPFKFRIAQSGFSSTETFAYFCIASNNVRLVRT
>NZ_CP015209|908770:917188|913492_914128_+|WP_002873428.1|DBSCAN-SWA
MFYDLKNKSLKYDDIFLKDVKIQNEEGEIDAQDTYFLSACDDKLLKELGFAKVKEEEIPSFNEKIEELRQIQTYDEENNLYIISYEIKEKALEELKELKLEELKAIKEEKLLFMPFKNTIFQIDTEAKINISGKVSEIMLANLNNTPLENIAWIDKDNKITTFNKEEFLEFGVGIAKYTESIIFKNDELRNKVKNATSLEELNLIAWESEK
>NZ_CP015209|908770:917188|910189_910384_+|WP_002871234.1|DBSCAN-SWA
MKEHGCNPNFTKKFNRALSYKDYIQSINSADFIAYLDDKKWLLAMDDLLFFCEKRIKDSDYYEG
>NZ_CP015209|908770:917188|916171_916648_+|WP_065453894.1|DBSCAN-SWA
MKITINRRYIGKTCVIGKFRVFDDNENILLDCFSLEEDKEGLEREQDLRVPAGIYNLKRHVESSFNPKGKKEVAGVKVLKDDDSVINIFNNDVPFNRRILIHWGNTYKDTKGCILLGLTKDNNNESVGQSRLACKEFYDLMYGKNLEDIKLEITNELA
>NZ_CP015209|908770:917188|916653_917073_+|WP_065453933.1|DBSCAN-SWA
MFSYILGDKKLYIALVLMTILAGYFYLRLDSTKAKLEKSQSDLALALKINENNQEKLKELNQIHKTELKALNEANNQKNQVQERVQYVKEYIYKSNENNITKLFNDVVDRLWDANSTSSNQNRNSKSKNSARTTNIKSS
>NZ_CP015209|908770:917188|914124_914508_+|WP_002869963.1|DBSCAN-SWA
MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEAGERTKELISETKNTNVLIREQIAVSRASSDSLVKFIETHCSKTNDKLEAIETDLMRMDERLVKLTQIRNDELRSIFKKKENND
>NZ_CP015209|908770:917188|913030_913480_+|WP_002896804.1|DBSCAN-SWA
MNCLLLSNNGIALNLPPSLGGSVANYNYMLKLDMIYKQAVVLPSNINNKEVVMLGEVWTTGNMSNKTSGNTLEITWNNFNSKVTLHALSKYYTANAKIKVEKKFNFGNINNLQIILSSWQSGSANASAGWNLNDGDRLNPRANLTLYWN
>NZ_CP015209|908770:917188|908770_909805_+|WP_052782368.1|DBSCAN-SWA
MALPSMGHTPPATENVKLKQSIYETIIKIGATETPILNKIGTSKVTNPLTHSWITDTFEEPKKNANLELSKFVGETKNTAQKTTNATQIFITEAMVSKALLKANQYGGNEMEYQIGKKTKEHKMDMEYALFGLGRDSDVKKSVFKDYVQAQEATSGEMAGLFHYIAKGKDSFADGKRGNVLAFDETGDWSGTATELTEDKLNQILQTIWNSGVTPKDVFLGADLKGAINKFATRILGNETKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGDFEYMKHGLYIPTMIEDVPTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKAKAVLKAAKGA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052782368.1|908770_909805_+	hypothetical protein	A0A2I7SBK1	Pseudomonas_phage	2.0e-17	30.5
WP_002861675.1|909804_910209_+	hypothetical protein	NA	NA	NA	NA
WP_002871234.1|910189_910384_+	hypothetical protein	NA	NA	NA	NA
WP_065453892.1|910386_913029_+	hypothetical protein	X2KLU0	Campylobacter_phage	2.8e-44	66.2
WP_002896804.1|913030_913480_+	hypothetical protein	X2KXK7	Campylobacter_phage	1.9e-78	98.0
WP_002873428.1|913492_914128_+	DUF4376 domain-containing protein	X2KRD7	Campylobacter_phage	6.5e-96	99.1
WP_002869963.1|914124_914508_+	hypothetical protein	X2KXD5	Campylobacter_phage	2.4e-61	100.0
WP_021358083.1|914500_914875_+	DUF1353 domain-containing protein	X2KPN9	Campylobacter_phage	4.4e-68	99.2
WP_065453894.1|916171_916648_+	hypothetical protein	X2KRD2	Campylobacter_phage	1.1e-60	72.8
WP_065453933.1|916653_917073_+	hypothetical protein	X2KX19	Campylobacter_phage	3.6e-50	92.8
WP_002781772.1|916990_917188_+	hypothetical protein	X2KPN2	Campylobacter_phage	3.7e-26	96.9