CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number
NZ_CP016475	Synechococcus sp. PCC 7003 plasmid unnamed1, complete sequence	2 crisprs	NA	3
NZ_CP016474	Synechococcus sp. PCC 7003 chromosome, complete genome	2 crisprs	c2c9_V-U4,cas14j,DEDDh,csa3,cas3,DinG	0
NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	1 crisprs	cas4,WYL,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cas2,cas1,csx18,cas14j	52

Cas Category Instructions

Results visualization

1. NZ_CP016475

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016475_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016475_1

9619-9760

Orphan

Consensus_repeat	Method
GGTATTTTTTGTCTTACACCAAA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP016475_1

>merge|NZ_CP016475|1|9619-9760|CRISPRCasFinder
GGTATTTTTTGTCTTACACCAAACAGGATCATCACCTGGGTATTTTATGCCTTACAAAAATGCGATCGCGATCGCCGCTCAGGTATTTTTTGTCTTACACCAAAGACGATCAGCGTCTGCGTATTTTATGGCGCACAAAAAA

>NZ_CP016475|1|1|9619-9760|CRISPRCasFinder
GGTATTTTTTGTCTTACACCAAA	CAGGATCATCACCTG
GGTATTTTATGCCTTACAAAAAT	GCGATCGCGATCGCCGCTCA
GGTATTTTTTGTCTTACACCAAA	GACGATCAGCGTCTG
CGTATTTTATGGCGCACAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016475.1\|WP_083998082.1\|13791_14652_+\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|224777
NZ_CP016475.1\|WP_065715407.1\|5090_5273_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_157094803.1\|13453_13741_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715423.1\|19482_20409_-\|DUF559-domain-containing-protein	unknown	unknown	gnl\|CDD\|238509
NZ_CP016475.1\|WP_157094801.1\|6916_7246_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715405.1\|4466_4649_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_083998084.1\|11240_12179_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130902
NZ_CP016475.1\|WP_083998081.1\|7948_8752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715412.1\|7335_7596_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715415.1\|9821_10850_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NZ_CP016475.1\|WP_065715408.1\|5333_5564_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715416.1\|10863_11133_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_083998083.1\|8904_9552_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715409.1\|5649_5898_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_071932305.1\|6159_6948_+\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|238192
NZ_CP016475.1\|WP_157094802.1\|13169_13397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715422.1\|16020_19464_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_157094804.1\|14786_15266_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224442
NZ_CP016475.1\|WP_083998085.1\|12213_12660_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715406.1\|4654_5083_+\|DUF1071-domain-containing-protein	unknown	unknown	gnl\|CDD\|310756

Protein	Function_ID	Function_description	E-value
NZ_CP016475.1\|WP_083998082.1\|13791_14652_+\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|224777	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism].	1.04629e-34
NZ_CP016475.1\|WP_157094804.1\|14786_15266_-\|hypothetical-protein	gnl\|CDD\|224442	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].	3.61376e-05
NZ_CP016475.1\|WP_083998084.1\|11240_12179_+\|hypothetical-protein	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.03164e-06
NZ_CP016475.1\|WP_071932305.1\|6159_6948_+\|DNA-cytosine-methyltransferase	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	7.20038e-32
NZ_CP016475.1\|WP_065715423.1\|19482_20409_-\|DUF559-domain-containing-protein	gnl\|CDD\|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	0.000527425
NZ_CP016475.1\|WP_065715415.1\|9821_10850_+\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	7.95481e-22
NZ_CP016475.1\|WP_065715406.1\|4654_5083_+\|DUF1071-domain-containing-protein	gnl\|CDD\|310756	pfam06378, DUF1071, Protein of unknown function (DUF1071). This family consists of several hypothetical bacterial and phage proteins of unknown function.	3.366e-05

>NZ_CP016475.1|WP_083998083.1|8904_9552_+|hypothetical-protein
MELAKQFRVDTVEPKYNKDGEVIGDRQLTADEIKEKLAQEIEKGSLLIIPEAKRLPASIRYWLETLMRMGKVIVVAIAVAVIKRDIYLQMLEVELERPSIDAIRGVILEEAEKNDLSLTDHQIAKLLTVAGRNPLLARKAVRNEKLGLNPEPEHSLYLDISPIIISALMAFSIVRFIGLGTGDRGLYVIGGIALVLGVMLRQIGKIRGTRRKYGQ
>NZ_CP016475.1|WP_083998081.1|7948_8752_+|hypothetical-protein
MQPYYGSIENKNFFMYDRQEVQRKLGIGKSRYYQYLKATGVQPIKRDGRITITQAELDILLAYKESLNSPLESSSETTKKPLESKVDTSDSMPVESHNSTAINPAESQLESLGNDEGNHLESPTESLAESDESPIESIDELTNSPVNDSDSSPMSPVEDTSDSPLSPVLYEVDDLLSEPSVENLDLSDETDFDALIRIAQAKKAKQILQPELVMAHLVEQMTEDDLPEDLRRKIEQTRRAIRDPLANPAAIASQILTKYRSGSIQKT
>NZ_CP016475.1|WP_065715412.1|7335_7596_+|hypothetical-protein
MNNNDILQSLINHDSKITLSLSAFEVFVLVAYLQTAQHWIRGESGLMVQNLVTKLINAVSQSIPEAGKLLEQGNQPGVKITEEYFE
>NZ_CP016475.1|WP_157094801.1|6916_7246_+|hypothetical-protein
MTGTTNKRRGRPRGSSGKASGCLVPFTETRRGKTYPIIQGERVPKDIALDYPHHYRWFYQWREWQEKQQRWSTRSKRIKFQQVAAIHQLIQANQNVVRILNFIETGRLE
>NZ_CP016475.1|WP_071932305.1|6159_6948_+|DNA-cytosine-methyltransferase
MLRHCELFGGIGGFSHAIAKYYSESIKTTDYCDIDEQAIAVYSNYFPKVTIHKDIRTYYPQQKEFDLITCGFPCTGTSHAGSKTGLHHPESQLWREGLRIMCQVRPQYFIWEQPVGIATRGLRAILGGCRMAGYQTTGFTIAASELGASHRRERTFIIAYLDHRTGHDPQCWSDEVRTKAEAIRRYSPWLSIQPRGDGDVHGFSMASLQLNHWTTLHPTAYLVPSGLKGRNDVRRLAGKTVTPAQAAIALHFVDWHHQQKAR
>NZ_CP016475.1|WP_065715409.1|5649_5898_+|hypothetical-protein
MSKLDTLPKKFQEVARAKYGDLKKNEEMYPSVFGVRLPVDIAEKLLKEDGSKNTPLLRSILMKVIREHPDLLEEIKQELGDV
>NZ_CP016475.1|WP_065715408.1|5333_5564_+|hypothetical-protein
MDTSTAKALGHEFTRTALTELSLDDDPTAFKRFILDHQATPQILNAPPLIKQAFKEGILEAMLEIALAEHQDVCGA
>NZ_CP016475.1|WP_065715407.1|5090_5273_+|hypothetical-protein
MQAYFLTHDLTIKLVQVDSICKETHTVTINGDRQLRLTEKGAYFATMKGVKNALKTILGE
>NZ_CP016475.1|WP_065715406.1|4654_5083_+|DUF1071-domain-containing-protein
MTTITSPQTQRPSSIGEWTLKQTIETLSRPIPASMLGTKDRNITYLPWHNAVKILDKYCPGWTWEIVTIQASGDRLFLTGRLTLTVAEGNIYREATGTETLKLVKRTGEVVEHPYGDPSSNAESMAFRRACAKFGLGLYLYQ
>NZ_CP016475.1|WP_065715405.1|4466_4649_+|hypothetical-protein
MTNPMNKPNAKAMAQELIKLRNYIEQHYSRTWNVEEALGKPGTTRLYKLFEQAEEILLEE
>NZ_CP016475.1|WP_065715415.1|9821_10850_+|metal-dependent-hydrolase
MMSVTHAIIGVCGTTLLLQTADPVVLGLAIIGSQIPDLDSSHSLVGQVFFPVSHWLEDRYPHRTITHCLLFNAVLSAIAGALWYFLGIPTPWAIALPLGHFLAIFSDTFTKQGVQLFYPLQAWCVCGMNPKRRMKTGGKAEYWVLGIAVLILFLNLNLLGNGGFRDVASRTLNLKDHSIREYNAKAATNATWLHVEGVWASDRRPVNQTFFIVAEDGGYIVTDGQGVYKVGETGDILPTLVRLDIGDEQTVETFTQGFNDEPLDEVLREISQRYPNGLVLISGNVAIDFPEELPGSLPQPLTPYGDRIAFNYADTNQVIPVLEGQWAIGQLEFKVFTPAPTF
>NZ_CP016475.1|WP_065715416.1|10863_11133_+|hypothetical-protein
MDDKSFLDQILECKETFILGLNATQFFVLISHLQVAQRYVDGDSRAIAQELIDSFIGTLSKEIPTARAVLELGNNPAFDVDADYFDQEF
>NZ_CP016475.1|WP_083998084.1|11240_12179_+|hypothetical-protein
MLNFALQKLKPSEPIRYLFSVMVIFMSFGAFLLPLGSIAQQNEPEETEVESVVANSPSRYTFKVKLTELDDLKVKEGDEVSINQVIADRPQDRDRLLVEKQRLQLAIARLNTLEISRPLPPRTVPEVAGLPPVSYESHKANIAQATTKLELAKLAIANQKSLIEEISQLNEPLLVTHETAKLEALKVDQQTAQLELNKAVANLKDAQAQRQHQEYLSSLAIAERIERANANALAYQRQLQEFENQQRSRAYQLSDLNTKLADVEKQLSEVSTVRSPYAGTIRRIKWLDQSEGTINAEITLRLGDPDPVPNRE
>NZ_CP016475.1|WP_083998085.1|12213_12660_+|hypothetical-protein
MEASRLENLEASVDYQRDRRWTTWLNPNPIGILQNLLGGGDRQRAELQIRTTEAQADASRLNLVEADIRTEMRKKAIAEQIQADLDQLADLEAELMAEQKRLQLFEIYFQRGQGSPAEYLNFQNRLAQLTAEKENLTAKINNICEDEQ
>NZ_CP016475.1|WP_157094802.1|13169_13397_+|hypothetical-protein
MLFLVVFGRSGSAGSAPAVSRSVPVVVCGPACSLAVRAAVVPSSCCLLLSRSGRPLSGGALSARVGRLRRAGVLV
>NZ_CP016475.1|WP_157094803.1|13453_13741_+|hypothetical-protein
MIRRSFSVGRSGSRVLVPFRRVSGLALSCGCVGWSVRGSFRAFSGSVVWAEFASPGAAARFGFRASRLVGVPVWVRPGVCSSAGPVWVVSVPVSR
>NZ_CP016475.1|WP_083998082.1|13791_14652_+|DNA/RNA-non-specific-endonuclease
MERVNIAASMRDIKWAIALAKSIIKHPIRAIPLLIGIGLVFFGAQNYEPPTEPNEARSSAVPGGSASNNPCPVHLPNGLPIGTPATNDLVVRDIYCLSSNDRTKFADWVAFRLDRATITGSSDQDREWEADPAIARDQTLEPEDFRGAYKWGNYDRGHLAPLASFRGKNWQQVNYLSNITPQKASLNRGAWKELEEYERDLVRQHGEVYVIVGTAYDSQPLQLINADEPTDIPDYFWRIIQYNGQTEAYLFPQDTPSGTDFRQGKTTVDEIERRSSLIFVLHHKNN
>NZ_CP016475.1|WP_157094804.1|14786_15266_-|hypothetical-protein
MLNRSIALISTSIALSSCVACVEEGIFPKPLQYAVYPSQTIDGDTAVVRDPTDATKTIKLNLCGINAPGLEEEGGEEARLALVDILMQSQPHFTVYVVDRGDFSGDEHNHAEIFYLGQVDGQEQDIFVSAEMVRLGHAVIDEQTVDKCFNVDVLRELNS
>NZ_CP016475.1|WP_065715422.1|16020_19464_+|hypothetical-protein
MANFTLLKGDCPICGGIRNGRQKLDCKQSGELIHCFSHNDPPPGFRFVGQSAIGQSLYAPEREKGLDPEQHRAALAKLRAEYQAQAAARQAQLPAIPVRHQEILGYPAELTPAQNTDLLRRGLTQQEIDFALSQHWLFGCQGGYGITAIDSATGMFCGAQRALDDRSQRKYDWAIFAGRNQLKETGENPLFVWRSPDFNPKKPYEVKFCEGALKSLIRAFLEWRHSPQVILVGAAGGIFGEQSVQRLLGVYDKVWRFTLLPDADSQNLRKKNLYAGYGKLAKAIAPLKFADWGQWQDKSQGDCDEGLRDYVRRSPNVWLQPFKLAEAAEKTLKATQRFTVTPTVTINDGAQYLPDDVIPLPTEARVVGLEVPKNCGKSYQQGQHIEKLRRLGYYPIQMSHRRGLAAEKAKEWQMTYIEADSPLPPEMPSNGLSVVVDSVLKLRHYDFSSQKIVLFWDEIEQILEHICHSTTSIRERRAAVMAYIGELMESAHQVILADADLKTIAVDWAVSLTASRKSEVCLIRKQYRHNRKAIICSDTTDALVYAAQQLQADNPTYIAVAGQKANSRFGSQSLENYLSGQANSTIRVDSDTNRDPAHPAYKITKNIEVLNHYQLAIATAVIGTGVNIKGDHFKSVIGIAAGNESVESFLQKLSRVRNDGDRLVAISSTANSLSQRYGGHTNVQQLLLNDSKQGQLLRQHLQSFGDWGDNWLFNPWLKAFAERICLNNELGKNYKASVMAQLHREGYQIIEQSFCDRGQRKKIRRLLDDGCHKQIRKYIADILASKPKLGEDLKASKATFDQTYPEKCAEVHGDLLTLYGDDSEAIAQAHLTQRHFYRKLQLHFWLNQTQEAVKQRDERKLKFLRESNEGRLFQNDVNQMTFSVTVAAMRKLGLADILQRGYISSDCSHIERIKQILNDDKQRQDFSRQLRLGLDDCPRKSPVAISVFLLKNLLGLDVARDGEGKAVRQKLNGILTTPIDFGDINREAIFQFWEQNIILDDLEEKKIASQADHFWKTKNLSIEKNDPVPETTIQQGLQPADHFFPHSRSSQTIPENKPQNPAVLAVNKQSPPDQIPDDPVSPLSWDILRPIQDAIMALARGDRRPLWKLVVKFHFPTIQRAAQQLDAMPGGSGFMACLFSRWQISSA
>NZ_CP016475.1|WP_065715423.1|19482_20409_-|DUF559-domain-containing-protein
MPEYPDIYIPPRLKQISSAKPELPAPPAKPVKPEHPTKPKWWPPITVGLLCLVATLIIFSNIPVLSLITGGLGIAVTRLIQTQGFRGDLAEYRRLEQEYPRRLTDYEKERRNFQDLKNRLKDPQFVQEYQQKLLNQFKNTIYQPDGYNSNARTGRCEGCLYRAMNKHLPGKIIQNAKLDIPNYSYPYSPDVCYVYDDIYFDIEVDEPYTPLNGDGDYKPIHGWEESKEHNRNNFFLNKGWVVIRFSEEQVARYPDSCVKEIAQVVEQITQEPLPASLVNVENLNPQPRWTIEEAEQLADRNHRQTYDC

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Crispr_ID: NZ_CP016475_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016475_2

14621-14741

Orphan

Consensus_repeat	Method
TAATTTTTGTCTTACACCAAAG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP016475_2

>merge|NZ_CP016475|2|14621-14741|PILER-CR
TAATTTTTGTCTTACACCACAAAAATAATTAATGAGGTCAAGAAGTTATCAGTATTTTTTGTCTTACACCAAAGGCTAAACATTTCTCAGAAAGCCTTTTTATTTTTGTCTTACACCAAAG

>NZ_CP016475|2|1|14621-14741|PILER-CR
TAATTTTTGTCTTACACCACAA	AAATAATTAATGAGGTCAAGAAGTTATCAGTAT
TTTTTGTCTTACACCAAAGGCT	AAACATTTCTCAGAAAGCCTTTTTA
TTTTTGTCTTACACCAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016475.1\|WP_157094803.1\|13453_13741_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715424.1\|20618_22736_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226481
NZ_CP016475.1\|WP_065715430.1\|28703_28997_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224583
NZ_CP016475.1\|WP_157094801.1\|6916_7246_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715429.1\|27141_28704_+\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363
NZ_CP016475.1\|WP_083998084.1\|11240_12179_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130902
NZ_CP016475.1\|WP_083998081.1\|7948_8752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715427.1\|24626_26762_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|226114
NZ_CP016475.1\|WP_065715412.1\|7335_7596_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715415.1\|9821_10850_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NZ_CP016475.1\|WP_065715416.1\|10863_11133_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_083998083.1\|8904_9552_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_157094802.1\|13169_13397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715425.1\|22761_23433_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378929
NZ_CP016475.1\|WP_157094804.1\|14786_15266_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224442
NZ_CP016475.1\|WP_065715422.1\|16020_19464_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715423.1\|19482_20409_-\|DUF559-domain-containing-protein	unknown	unknown	gnl\|CDD\|238509
NZ_CP016475.1\|WP_083998085.1\|12213_12660_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715428.1\|26815_27013_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016475.1\|WP_065715431.1\|28993_29347_+\|DUF86-domain-containing-protein	unknown	unknown	gnl\|CDD\|225236

Protein	Function_ID	Function_description	E-value
NZ_CP016475.1\|WP_065715424.1\|20618_22736_+\|hypothetical-protein	gnl\|CDD\|226481	COG3972, COG3972, Superfamily I DNA and RNA helicases [General function prediction only].	3.70739e-16
NZ_CP016475.1\|WP_065715425.1\|22761_23433_+\|hypothetical-protein	gnl\|CDD\|378929	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	0.000309882
NZ_CP016475.1\|WP_065715429.1\|27141_28704_+\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	1.63076e-148
NZ_CP016475.1\|WP_157094804.1\|14786_15266_-\|hypothetical-protein	gnl\|CDD\|224442	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].	3.61376e-05
NZ_CP016475.1\|WP_083998084.1\|11240_12179_+\|hypothetical-protein	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.03164e-06
NZ_CP016475.1\|WP_065715427.1\|24626_26762_-\|DUF262-domain-containing-protein	gnl\|CDD\|226114	COG3586, COG3586, Uncharacterized conserved protein [Function unknown].	2.15854e-45
NZ_CP016475.1\|WP_065715423.1\|19482_20409_-\|DUF559-domain-containing-protein	gnl\|CDD\|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	0.000527425
NZ_CP016475.1\|WP_065715415.1\|9821_10850_+\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	7.95481e-22
NZ_CP016475.1\|WP_065715430.1\|28703_28997_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	1.6052e-25
NZ_CP016475.1\|WP_065715431.1\|28993_29347_+\|DUF86-domain-containing-protein	gnl\|CDD\|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	5.1917e-32

>NZ_CP016475.1|WP_157094803.1|13453_13741_+|hypothetical-protein
MIRRSFSVGRSGSRVLVPFRRVSGLALSCGCVGWSVRGSFRAFSGSVVWAEFASPGAAARFGFRASRLVGVPVWVRPGVCSSAGPVWVVSVPVSR
>NZ_CP016475.1|WP_157094802.1|13169_13397_+|hypothetical-protein
MLFLVVFGRSGSAGSAPAVSRSVPVVVCGPACSLAVRAAVVPSSCCLLLSRSGRPLSGGALSARVGRLRRAGVLV
>NZ_CP016475.1|WP_083998085.1|12213_12660_+|hypothetical-protein
MEASRLENLEASVDYQRDRRWTTWLNPNPIGILQNLLGGGDRQRAELQIRTTEAQADASRLNLVEADIRTEMRKKAIAEQIQADLDQLADLEAELMAEQKRLQLFEIYFQRGQGSPAEYLNFQNRLAQLTAEKENLTAKINNICEDEQ
>NZ_CP016475.1|WP_083998084.1|11240_12179_+|hypothetical-protein
MLNFALQKLKPSEPIRYLFSVMVIFMSFGAFLLPLGSIAQQNEPEETEVESVVANSPSRYTFKVKLTELDDLKVKEGDEVSINQVIADRPQDRDRLLVEKQRLQLAIARLNTLEISRPLPPRTVPEVAGLPPVSYESHKANIAQATTKLELAKLAIANQKSLIEEISQLNEPLLVTHETAKLEALKVDQQTAQLELNKAVANLKDAQAQRQHQEYLSSLAIAERIERANANALAYQRQLQEFENQQRSRAYQLSDLNTKLADVEKQLSEVSTVRSPYAGTIRRIKWLDQSEGTINAEITLRLGDPDPVPNRE
>NZ_CP016475.1|WP_065715416.1|10863_11133_+|hypothetical-protein
MDDKSFLDQILECKETFILGLNATQFFVLISHLQVAQRYVDGDSRAIAQELIDSFIGTLSKEIPTARAVLELGNNPAFDVDADYFDQEF
>NZ_CP016475.1|WP_065715415.1|9821_10850_+|metal-dependent-hydrolase
MMSVTHAIIGVCGTTLLLQTADPVVLGLAIIGSQIPDLDSSHSLVGQVFFPVSHWLEDRYPHRTITHCLLFNAVLSAIAGALWYFLGIPTPWAIALPLGHFLAIFSDTFTKQGVQLFYPLQAWCVCGMNPKRRMKTGGKAEYWVLGIAVLILFLNLNLLGNGGFRDVASRTLNLKDHSIREYNAKAATNATWLHVEGVWASDRRPVNQTFFIVAEDGGYIVTDGQGVYKVGETGDILPTLVRLDIGDEQTVETFTQGFNDEPLDEVLREISQRYPNGLVLISGNVAIDFPEELPGSLPQPLTPYGDRIAFNYADTNQVIPVLEGQWAIGQLEFKVFTPAPTF
>NZ_CP016475.1|WP_083998083.1|8904_9552_+|hypothetical-protein
MELAKQFRVDTVEPKYNKDGEVIGDRQLTADEIKEKLAQEIEKGSLLIIPEAKRLPASIRYWLETLMRMGKVIVVAIAVAVIKRDIYLQMLEVELERPSIDAIRGVILEEAEKNDLSLTDHQIAKLLTVAGRNPLLARKAVRNEKLGLNPEPEHSLYLDISPIIISALMAFSIVRFIGLGTGDRGLYVIGGIALVLGVMLRQIGKIRGTRRKYGQ
>NZ_CP016475.1|WP_083998081.1|7948_8752_+|hypothetical-protein
MQPYYGSIENKNFFMYDRQEVQRKLGIGKSRYYQYLKATGVQPIKRDGRITITQAELDILLAYKESLNSPLESSSETTKKPLESKVDTSDSMPVESHNSTAINPAESQLESLGNDEGNHLESPTESLAESDESPIESIDELTNSPVNDSDSSPMSPVEDTSDSPLSPVLYEVDDLLSEPSVENLDLSDETDFDALIRIAQAKKAKQILQPELVMAHLVEQMTEDDLPEDLRRKIEQTRRAIRDPLANPAAIASQILTKYRSGSIQKT
>NZ_CP016475.1|WP_065715412.1|7335_7596_+|hypothetical-protein
MNNNDILQSLINHDSKITLSLSAFEVFVLVAYLQTAQHWIRGESGLMVQNLVTKLINAVSQSIPEAGKLLEQGNQPGVKITEEYFE
>NZ_CP016475.1|WP_157094801.1|6916_7246_+|hypothetical-protein
MTGTTNKRRGRPRGSSGKASGCLVPFTETRRGKTYPIIQGERVPKDIALDYPHHYRWFYQWREWQEKQQRWSTRSKRIKFQQVAAIHQLIQANQNVVRILNFIETGRLE
>NZ_CP016475.1|WP_157094804.1|14786_15266_-|hypothetical-protein
MLNRSIALISTSIALSSCVACVEEGIFPKPLQYAVYPSQTIDGDTAVVRDPTDATKTIKLNLCGINAPGLEEEGGEEARLALVDILMQSQPHFTVYVVDRGDFSGDEHNHAEIFYLGQVDGQEQDIFVSAEMVRLGHAVIDEQTVDKCFNVDVLRELNS
>NZ_CP016475.1|WP_065715422.1|16020_19464_+|hypothetical-protein
MANFTLLKGDCPICGGIRNGRQKLDCKQSGELIHCFSHNDPPPGFRFVGQSAIGQSLYAPEREKGLDPEQHRAALAKLRAEYQAQAAARQAQLPAIPVRHQEILGYPAELTPAQNTDLLRRGLTQQEIDFALSQHWLFGCQGGYGITAIDSATGMFCGAQRALDDRSQRKYDWAIFAGRNQLKETGENPLFVWRSPDFNPKKPYEVKFCEGALKSLIRAFLEWRHSPQVILVGAAGGIFGEQSVQRLLGVYDKVWRFTLLPDADSQNLRKKNLYAGYGKLAKAIAPLKFADWGQWQDKSQGDCDEGLRDYVRRSPNVWLQPFKLAEAAEKTLKATQRFTVTPTVTINDGAQYLPDDVIPLPTEARVVGLEVPKNCGKSYQQGQHIEKLRRLGYYPIQMSHRRGLAAEKAKEWQMTYIEADSPLPPEMPSNGLSVVVDSVLKLRHYDFSSQKIVLFWDEIEQILEHICHSTTSIRERRAAVMAYIGELMESAHQVILADADLKTIAVDWAVSLTASRKSEVCLIRKQYRHNRKAIICSDTTDALVYAAQQLQADNPTYIAVAGQKANSRFGSQSLENYLSGQANSTIRVDSDTNRDPAHPAYKITKNIEVLNHYQLAIATAVIGTGVNIKGDHFKSVIGIAAGNESVESFLQKLSRVRNDGDRLVAISSTANSLSQRYGGHTNVQQLLLNDSKQGQLLRQHLQSFGDWGDNWLFNPWLKAFAERICLNNELGKNYKASVMAQLHREGYQIIEQSFCDRGQRKKIRRLLDDGCHKQIRKYIADILASKPKLGEDLKASKATFDQTYPEKCAEVHGDLLTLYGDDSEAIAQAHLTQRHFYRKLQLHFWLNQTQEAVKQRDERKLKFLRESNEGRLFQNDVNQMTFSVTVAAMRKLGLADILQRGYISSDCSHIERIKQILNDDKQRQDFSRQLRLGLDDCPRKSPVAISVFLLKNLLGLDVARDGEGKAVRQKLNGILTTPIDFGDINREAIFQFWEQNIILDDLEEKKIASQADHFWKTKNLSIEKNDPVPETTIQQGLQPADHFFPHSRSSQTIPENKPQNPAVLAVNKQSPPDQIPDDPVSPLSWDILRPIQDAIMALARGDRRPLWKLVVKFHFPTIQRAAQQLDAMPGGSGFMACLFSRWQISSA
>NZ_CP016475.1|WP_065715423.1|19482_20409_-|DUF559-domain-containing-protein
MPEYPDIYIPPRLKQISSAKPELPAPPAKPVKPEHPTKPKWWPPITVGLLCLVATLIIFSNIPVLSLITGGLGIAVTRLIQTQGFRGDLAEYRRLEQEYPRRLTDYEKERRNFQDLKNRLKDPQFVQEYQQKLLNQFKNTIYQPDGYNSNARTGRCEGCLYRAMNKHLPGKIIQNAKLDIPNYSYPYSPDVCYVYDDIYFDIEVDEPYTPLNGDGDYKPIHGWEESKEHNRNNFFLNKGWVVIRFSEEQVARYPDSCVKEIAQVVEQITQEPLPASLVNVENLNPQPRWTIEEAEQLADRNHRQTYDC
>NZ_CP016475.1|WP_065715424.1|20618_22736_+|hypothetical-protein
MNAPSNKSFPELATLERAYKNHKDAQIKNIERLQTVHKHYNHAAAMCKAMVALLQGFEDRKVYMIVEPEISKLGKISRPEDFVAWVEGVGIFVIEIKSHTINGISSFENNVPQVMYQGRSSGDKDLLDQPREFAYDLKAPLEELFDRQDLELPPLYYAGWLPNVSPEDVASRSQHVDQDKVWLSDMLDVEVFKKRVPELKNITRSSNVSRDALELFCKVFGSTSGLRKANNHLRNLPTGSLGQLIDRKNNYLKRLTKEQEDLAFSPNLTRGPKVIRGVAGSGKTIVLANAVAEVFLREITNSSSDIGDKRSFDTDCIPEVLVLCYNRSLVPYLKELIINCFNIRKNQSQWPFPFSKLTIQNIDRYARKLAGKKYDFKDISKAVDYILDNGLDKDRYRYTFVDEGQDLILDWYPLLRHFTQDQPELGRSIIIFYDDAQNIYGRPRPGSTSKVPPWKELLGADVNPRGLKTIMRVGHRNTNKILSFSFSLLLGSLAEDDPQMIQFSGISEFKKERIPDDPSLDHPNAGKLSVEQIDNRQFKINFAVEEGMPPVINSFLNEELMLNALVKRIKYTLSADGDNVQPDDVLIMAPFTDQVVEISKRLQKEDIAVHIPVKLKNGHDGRDQSAFVPGKVTVSTINSAKGYTAHICHLTYVHSFEKDDMAKENIQRMRAQIHVACTRSSLLLELWGLNSPLMQEAQEVQALIS
>NZ_CP016475.1|WP_065715425.1|22761_23433_+|hypothetical-protein
MPIATNIKLDKKTHVYIDTQGKQYTSVSKIINRYKEPFDRMGNAERVSQKTGRSISEILAEWDAAAPYGTAVHKQIENYLLGNTTEIDLIQPYIPKFDALRQSGYKLHLETILHADDVSVAGMADLLIERDDGTWSIFDWKTNKAIYKNSFGGKKLKPPLDHLDDCNYIHYSLQLSLYARMLGKPIHELMIIHIPKGKEELDPILCLNLAEEVELILSEHIKG
>NZ_CP016475.1|WP_065715427.1|24626_26762_-|DUF262-domain-containing-protein
MKAQATQLLKFLQTSLQLNIPIYQRTYSWEIKECQQLWDDIIRAGKSDKIEVHFIGSVVYIMSNESATAPLLIIDGQQRLTTISILLEALARELENYSEEKIPKGFSSSQIRGKYLTNPYPDDPSEKYKLILTQTDKDTWLSLLKNQDFPHNKSLKISTNFDFFTQKIRGINNNLHQLCKGLKKLMVVDIALDRKSDNPQLIFESMNSTGRELSQADLIRNFILMGLEPEQQTSLYENYWRRMELEFGQEAYSSYFDSFMRYYLTVKLGELPKKTDVYVTFKKLINSKTIDSNIINKTVEDLYRFSKYYCAIALGRETDKDLKSAFRDLRELKVDVCYPLLLELYADYQNKILSKNELLEATRLIESYVFRRAICSIPTNSLNKTFANFHKFLKKDRYLESIKARFLTLPSYRRFPNNEEFKRELKIRDLYNFRNRSYWLRRLENHNKKELVVVDEYTIEHIMPQNKKLSDEWQKVLGENWQAIQAKWLHTLGNLTLTAYNSEYSDRPFPEKRDLTIEVDGGTAKEIGFKYSPLSLNQGLGQIEEWTEDEIKHRAEKLSQKAIEVWVAPKLEQDVLDVYQEKDTNNTNYSVNDHPHLLSGNIKKLFTEFRKQVLDLDPCITEEFLKLYVAYKAETNFVDVVPQAKRLRLSLNMKFPEINDPKGLCKDVTNLGRWGNGDVEVGLENLEQLPYVIGLVRQSFEKQMNNSDDEI
>NZ_CP016475.1|WP_065715428.1|26815_27013_-|hypothetical-protein
MPTQATPKKNQRRIGKSADPNFTRTTIYLSNDLHHQIKVHAVSNKEDMSELVERVMTDYFTKQNS
>NZ_CP016475.1|WP_065715429.1|27141_28704_+|SAM-dependent-DNA-methyltransferase
MPKTTKKVDTESFEQKLWKSADKLRKNIDAAEYKHIVLGLIFLKYISDAFEELYQKLVAGEGMYEGADPEDKDEYVAENVFFVPKEARWSFIQGKAKQPDIGEIVDQAMAKIEAENAKRLKGILPKVYGQQKLDPASLGGLIDLIGSIALGDAEAQAQDLLGRVYEYFLGQFALNEGKKGGQFYTPESIVRLLVEMLEPYHGRVFDPCCGSGGMFVQSQKFIEAHQGRLDDVSIYGQESNETTYKLCRMNLAIRGIDGSNIKWNPEGSFLNDAHRDLKADFVIANPPFNDSDWSGDLLQGDGRWTYGAPPKGNANFAWVQHFLYHLSPTGSAGFVLSNGSLSSNTSGEGDIRKALVEADLVDCIVMLPTQLFYNTGIPACLWFLSRYKNGNKNRSRKGEVLFIDASELGYMVNRRNRAFAEEDIAKVADTYHQWKLEGGKYEDIKGFCKSADLADIEKHKFVLTPGRYVGIPDEEDDGTPFEEKMGALTAELAEQMKEGLALDTEIKIQLAKVGFSLEVE
>NZ_CP016475.1|WP_065715430.1|28703_28997_+|nucleotidyltransferase-family-protein
MGLKDLLEEKREIILEIAAKHGAFNVRVFGSVVRGEDTPESDIDFLIDYDPNKTTPWFPGGLLMDLQDLLGRRVDVLTEDGISVLIRDRILAEAQPL
>NZ_CP016475.1|WP_065715431.1|28993_29347_+|DUF86-domain-containing-protein
MSEDKDLIYLEHILECIEAVQSYTVKGQNDFLENALVQDAVLRRLQIMAESTQRLSDSLKTQAPNVDWRGLAGFRNVLVHDYLGGISLNRVWDSIANNLPALKSEVELMLTKKKGGV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016475_1	1.2\|9680\|20\|NZ_CP016475\|CRISPRCasFinder	9680-9699	20	NZ_CP016475	Synechococcus sp. PCC 7003 plasmid unnamed1, complete sequence	9680-9699	0	1.0
NZ_CP016475_2	2.1\|14643\|33\|NZ_CP016475\|PILER-CR	14643-14675	33	NZ_CP016475	Synechococcus sp. PCC 7003 plasmid unnamed1, complete sequence	14640-14672	0	1.0
NZ_CP016475_2	2.2\|14698\|25\|NZ_CP016475\|PILER-CR	14698-14722	25	NZ_CP016475	Synechococcus sp. PCC 7003 plasmid unnamed1, complete sequence	14695-14719	0	1.0
NZ_CP016475_2	2.1\|14643\|33\|NZ_CP016475\|PILER-CR	14643-14675	33	NZ_CP038614	Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence	145903-145935	7	0.788

1. spacer 1.2|9680|20|NZ_CP016475|CRISPRCasFinder matches to NZ_CP016475 (Synechococcus sp. PCC 7003 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgatcgcgatcgccgctca	CRISPR spacer
gcgatcgcgatcgccgctca	Protospacer
********************

2. spacer 2.1|14643|33|NZ_CP016475|PILER-CR matches to NZ_CP016475 (Synechococcus sp. PCC 7003 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

caaaaataattaatgaggtcaagaagttatcag	CRISPR spacer
caaaaataattaatgaggtcaagaagttatcag	Protospacer
*********************************

3. spacer 2.2|14698|25|NZ_CP016475|PILER-CR matches to NZ_CP016475 (Synechococcus sp. PCC 7003 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gctaaacatttctcagaaagccttt	CRISPR spacer
gctaaacatttctcagaaagccttt	Protospacer
*************************

4. spacer 2.1|14643|33|NZ_CP016475|PILER-CR matches to NZ_CP038614 (Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence) position: , mismatch: 7, identity: 0.788

caaaaataattaatgaggtcaagaagttatcag--	CRISPR spacer
gaaaaataactaatgaggttaagaa--taatagtg	Protospacer
 ********.*********.*****  ** .**

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP016474

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016474_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016474_1

2006596-2006940

Orphan

Consensus_repeat	Method
CTATGGCGATATCGGCCC	CRT

7 spacers

The CRISPR arrays of NZ_CP016474_1

>merge|NZ_CP016474|1|2006596-2006940|CRT
CTATGGCGATATCGGCCCATGAATAGGCCCATGAATAATCACTTCCCCTATGGCGATATCGGCCCATGAATAGGCCCATGAATAATCACTTCCCCTATGGCGATATCGGCCCATGAATAGGCCCATGAATAATCACTTCCCCTATGGCGATATCGGCCCATGAATAGGCCCATGAATAATCACTTCCCCTATGGCGATATCGGCCCCCACAATGGGCCATGAATATTCCCTAGGCTATGGCGATATCGGCCCATGAATAGGCCCATGAATAATCACTTCCCCTATGGCGATATCGGCCCCCACAATGGGCCATGAATATTCCCTAGGCTATGGCGATATCGGCCC

>NZ_CP016474|1|1|2006596-2006940|CRT
CTATGGCGATATCGGCCC	ATGAATAGGCCCATGAATAATCACTTCCC
CTATGGCGATATCGGCCC	ATGAATAGGCCCATGAATAATCACTTCCC
CTATGGCGATATCGGCCC	ATGAATAGGCCCATGAATAATCACTTCCC
CTATGGCGATATCGGCCC	ATGAATAGGCCCATGAATAATCACTTCCC
CTATGGCGATATCGGCCC	CCACAATGGGCCATGAATATTCCCTAGG
CTATGGCGATATCGGCCC	ATGAATAGGCCCATGAATAATCACTTCCC
CTATGGCGATATCGGCCC	CCACAATGGGCCATGAATATTCCCTAGG
CTATGGCGATATCGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016474.1\|WP_157094731.1\|2006963_2008115_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714342.1\|2006237_2006498_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714352.1\|2014131_2014344_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714346.1\|2009633_2012204_+\|DUF3854-domain-containing-protein	unknown	unknown	gnl\|CDD\|372412
NZ_CP016474.1\|WP_065714334.1\|1998248_1999007_+\|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl\|CDD\|234733
NZ_CP016474.1\|WP_065714345.1\|2008998_2009364_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714332.1\|1996823_1997507_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP016474.1\|WP_065714350.1\|2013445_2013661_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_157094733.1\|2013155_2013419_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714338.1\|2003078_2003669_+\|fibrillin	unknown	unknown	gnl\|CDD\|309752
NZ_CP016474.1\|WP_065714333.1\|1997640_1998219_+\|late-competence-development-ComFB-family-protein	unknown	unknown	gnl\|CDD\|378482
NZ_CP016474.1\|WP_157094732.1\|2012207_2012417_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714351.1\|2013660_2014122_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714337.1\|2001895_2003020_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP016474.1\|WP_065714335.1\|1999022_2000726_-\|NAD+-synthase	unknown	unknown	gnl\|CDD\|237577
NZ_CP016474.1\|WP_065714339.1\|2003821_2004289_-\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|225060
NZ_CP016474.1\|WP_065714341.1\|2005699_2006191_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369368
NZ_CP016474.1\|WP_065714336.1\|2000748_2001705_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP016474.1\|WP_065714344.1\|2008517_2008751_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP016474.1\|WP_083998001.1\|2012458_2013163_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|366659

Protein	Function_ID	Function_description	E-value
NZ_CP016474.1\|WP_065714346.1\|2009633_2012204_+\|DUF3854-domain-containing-protein	gnl\|CDD\|372412	pfam12965, DUF3854, Domain of unknown function (DUF3854). A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This domain is likely to be related to the Toprim domain.	8.69282e-59
NZ_CP016474.1\|WP_065714334.1\|1998248_1999007_+\|DNA/RNA-nuclease-SfsA	gnl\|CDD\|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	1.13745e-126
NZ_CP016474.1\|WP_065714332.1\|1996823_1997507_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.1139e-09
NZ_CP016474.1\|WP_065714338.1\|2003078_2003669_+\|fibrillin	gnl\|CDD\|309752	pfam04755, PAP_fibrillin, PAP_fibrillin. This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins.	6.24817e-61
NZ_CP016474.1\|WP_065714333.1\|1997640_1998219_+\|late-competence-development-ComFB-family-protein	gnl\|CDD\|378482	pfam10719, ComFB, Late competence development protein ComFB. This family is conserved in bacteria. Some members, with three conserved cysteines, are annotated as late competence development protein ComFB.	4.7204e-20
NZ_CP016474.1\|WP_065714337.1\|2001895_2003020_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NZ_CP016474.1\|WP_065714335.1\|1999022_2000726_-\|NAD+-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	0
NZ_CP016474.1\|WP_065714339.1\|2003821_2004289_-\|DUF202-domain-containing-protein	gnl\|CDD\|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	1.67805e-23
NZ_CP016474.1\|WP_065714341.1\|2005699_2006191_+\|hypothetical-protein	gnl\|CDD\|369368	pfam07445, PriC, Primosomal replication protein priC. This family contains the bacterial primosomal replication protein priC. In Escherichia coli, this function in the assembly of the primosome.	0.00844908
NZ_CP016474.1\|WP_065714336.1\|2000748_2001705_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.51271e-25
NZ_CP016474.1\|WP_065714344.1\|2008517_2008751_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.10359e-09
NZ_CP016474.1\|WP_083998001.1\|2012458_2013163_-\|CHAP-domain-containing-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	7.921e-09

>NZ_CP016474.1|WP_065714342.1|2006237_2006498_-|hypothetical-protein
MKKEEYLQVLKNKPVEQIPERFRPRWKHTPTKAIRVPDEFADQLLDIARRLDSQTLSPEMLEEAIAAKMAETKKAVMAEVKRLNAL
>NZ_CP016474.1|WP_065714341.1|2005699_2006191_+|hypothetical-protein
MIDTLLKTLKLFGVFCLGSVGFAFIANGVTSASLRYSDEWLAVLFLMLLAFGLEVWIYKKFYKKWRIVFLNYMISHFAAFFAGIPWLFLMGAGSYDMAWIVFLGIWLPIAYFSLDQLDYFKRLELKVKEQQAQIDGFTDQKIQIQKQIETMKTRLDNQRRYGK
>NZ_CP016474.1|WP_065714339.1|2003821_2004289_-|DUF202-domain-containing-protein
MPQPPKIDRQREHQANERTFLAWLRTSIALIGFGFAIARFGFFVRQIEETLVPQGNLPFPNLASSETLGRAFAIAGIVIIALALWNYHQHFRQIEQGNYQPNRWMITTTALVAMVLGGLSLILMIGSKPDPAREDFSRSQTLPRASNLSKRHTRY
>NZ_CP016474.1|WP_065714338.1|2003078_2003669_+|fibrillin
MNLKTNLLETIAGKNRGLIATEVDRANILTIVDRLEDQNPTPKPLEATTLLEGDWRLIYTTSRGILGINRFPLVQLGQVYQCVRPLQQKIYNIAELEGIPFLEGLVLVEASFTPVSDQRVNVFFNRYVIGSQRLMNYRFPKGLVEQMLAGKKFFPVDVGINSKNNNGWLDITYLDEDLRIGRGNEGSVFVLSREKY
>NZ_CP016474.1|WP_065714337.1|2001895_2003020_+|glutamate-5-kinase
MPQTIVVKIGTSSLTDPNTGMLALATIGTLVETLTRLKQKGHRVILVSSGAVGVGCGVLKRSERPKKIAEKQAIAAVGQGRLIRLYDDLFTSLQQAIAQVLLTRRDLVDRTSYLTVQEALNAMLDLGVIPIVNENDTVAVDELKFGDNDTLSALVASLVNADWLVLLTDVDRLYSADPRQNPDARPIPLVSSSELFNLQVDAGSSGSQWGTGGMQTKLTAARIATSAGVRTVITQGKTPQNLLKIVAGEDIGTHFEAQPQADNARKRWIAYGLVPQGILTLDDGATQALLKNGRSLLAAGIVAVEGEFTINDPVELRTQTGQAIARGLVNYSHQDIEKIQGQHSTQIRQILGYGGADTVIHRDNLALLIAAEGI
>NZ_CP016474.1|WP_065714336.1|2000748_2001705_-|class-I-SAM-dependent-methyltransferase
MTDTAIAKEKPDWAGEDWLSRLVNRLIQTKPLYALMKQQARRVLIKTAEKNGVPWRQTVKELEQSPAKQYFQDIADPHLDYPDYYQVPFHAYNEGNLCWQAAFEAAPATAAMALRVWKTEPLTPEMAQARLRNSFLDVLEQHLPQEVNEALDIGCSVGISTFALLDRLQSKNPTVKVTGLDLSPHMLAVAKVQDKHQAVQWCHGKAETTGFTDDRFDLITLQFVLHELPNQATREIFQECRRILRPGGCLAIVDNNPKSPVIQGLPPALFVLMKSTEPWSDEYYTFDVESTLKEVGFDYRTTVASDPRHRTIIAHKPL
>NZ_CP016474.1|WP_065714335.1|1999022_2000726_-|NAD+-synthase
MKIAIAQLNPTIGDLTGNAERILVAAEQAAIANVRLLLTPELSLCGYPPRDLLLHADFIDRMQAQLAALAAKIPPTLAVLVGLATPNPEAIAKGEKALHNSIALIDQGKVQHIFHKQLLPTYDVFDEDRYFEPGKQSNWFFLHPSPTVAPLKIGVTICEDLWNDQAFWGKRQYEINPLEQLAEAGVDLIVNLSASPYTVGKQRLREGMLHHGAQRYRTPILYANQVGGNDDLIFDGGSVAFDREGQLLGRSPSFQESLLAVEFSPDQQTLSLPQGLPAAFQQTVSPEYDADEAEIFAALVLGLRDYVRKCGFSKIVLGLSGGIDSALVAAIAVAAVGAENVLGVLMPSPYSSEHSLSDAITLVKNLQIRHEIIPIEPAMTAFETMLGDLFAGTEFGVAEENLQSRIRGNLLMAIANKFGYLLVSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKMRVFSLCQWLNRDQEMIPPAIITKPPSAELRPDQFDQDSLPPYPVLDEILKRVIHRNQSAPELHAAGYDNDTVAQVFKLLHRAEFKRRQAAPGLKITDRAFGTGWRMPIACRW
>NZ_CP016474.1|WP_065714334.1|1998248_1999007_+|DNA/RNA-nuclease-SfsA
MTVPASPFVYRYPELIPGTLRKRYKRFLADIELASGEIVTAHCPNTGPMTGVCELGAPVMLSKSDNPKRKLAYTWEMIQLHTPEPTWVGVNTALPNRVIKAMLLAKQIPELADHYDTVRPEVRYGTANKSRIDFLLTGEGRSPLYVEVKNTTWTKGDLALFPDTETTRGQKHLQELIDIVPGAKAVMLYFINRGDCTRFAPGDSKDPKYGELFRQAIAAGIQILPCRFAVSPEGIRYLGLASWEAAEVSEAC
>NZ_CP016474.1|WP_065714333.1|1997640_1998219_+|late-competence-development-ComFB-family-protein
MNQPSVPSPGKGNRRAYQNIMENLVHKEIHRQLKRLPQKLADYIDVVEVATYALNRVPPLYASSERGKERQEEKGILDLKQQISIAVRQAIAAVQRDPLRSSTPLAPAQYAQYEIAETCLRDLEKLLRDSYLIESDAPDMDWDTLKIIVAKALKKAATQGIVHRRIEEVITEWEYQTYMPPVFDWQDPRYKF
>NZ_CP016474.1|WP_065714332.1|1996823_1997507_+|class-I-SAM-dependent-methyltransferase
MILSPSQRQKLDSSDDQLFYDYPRFVTHVDDGFIDQLTQLYGTLLQPNDRVLDLMSSWVSHLPDFAFREVVGHGMNAAELAKNRRLDRYFVQNLNTDPKLPLADQSFEAVLVAVSVQYLQYPEAVFAEIQRVLTPGGICIVSFSNRMFYQKAIAAWRDSTDTDHLQLVQHYFQQTPGFDKPTVVTQRSDQPLLLQMLGLGHRDPFYAVYARRQSLGGGVEESQQLLT
>NZ_CP016474.1|WP_157094731.1|2006963_2008115_-|hypothetical-protein
MRQIKDLEEVREIYGAQVADRLMADMLGDPDPAPKADPAPQNSVTQNLGLAELDPRSILADPKRFQFKLIHNAKTGSSGSLKGVSQWNHDLSGLLLVWRDPQNNQVYVVNGHNRLDLAIRLGVDRIAVRFINASDHVQARMIGAIANISEGKGSPLDVATLIRDLSLSKDDLADLGVKITDALADKGIAIANLESAFFNMVLEGRLSDNEAIAMGRLDKSMQSAFYELIRKDKRKLTNEVLDQLADIVKSSVSAQSFELNLFGENSVTQNLAIYKAEIDAYILKRLKRDKRLFSFVSKTANANDLQRGNNAIDTLTSSNIADKARAAIDIFNQLKNQSGSLCKKLNDAAIALHNGDNGTQVKQDIYDWVLSELNADNLLSLAI
>NZ_CP016474.1|WP_065714344.1|2008517_2008751_-|helix-turn-helix-transcriptional-regulator
MMEVQECNKLTLKKLRELLGLSQRAFAKALNVRYATVSDWERGKSEPHLSIPQIKALDMMLEKVDLKLRDLPDDLSQ
>NZ_CP016474.1|WP_065714345.1|2008998_2009364_+|hypothetical-protein
MNNLRSEALQVLLALLQRDSKTQSVGNLDQKIELAIHAAKTFHKRIAPHQTDGVVFPKSQPIQKYGEFTPSGYSVYFLTSDGSSFLVAEYSSISEAVGVAIALNAYLKSKGCKDNNSGIEL
>NZ_CP016474.1|WP_065714346.1|2009633_2012204_+|DUF3854-domain-containing-protein
MIDTDNNILTEELEKSAISEQFQRYFQQLSPSACWEFLLYGLGDDERRNDGRLRDKWLRNYAHLEDGGWWCSGIDILTFKPSLWGCLKPNSPRKIDGKPIKYEHPPKTPTEAFFLGDEDYWRGVIADKKTPIIITEGAKKAASLLSAGYCAIGLPGIFSGYRTPKNAQGQKIGDSYLIPQLKAIAQKNREIVFCFDNDLKPKTIRNVRIAVGRTAKLFRAEGCKVKVMCWTWDFPDLKGVDDVHFVHGPEAVKHLFDQRQSVTAWKRQERPDPKPAPKPEPSDPDQRPIEAMTTTPLKTSRPETRRIYGGTKNLNYAELFEFIQDEMAHRLSFDTMRKEMLLDGQLFRVADELRAWFFDEYGETASENDIYKAMVYFAKKNSFDPIVEDLRRCHREAERVPIHNLAARYFGQDPDKFTEEADKRKAWMYNRCVEMWLISAVARQLETEGKEADSTYLGCQADYTLVLQGGQGRGKSTWFKTLSKIYFNDSISEIQSTNSLMALHGNWIIELAEIDGITSKKDAASLKHYLTVRQDEFRAPYERKTQKHNRRSVFCGTVNPSRFLMDDENRRFWTVPITGDIDNARLAQERDGIWAAAMDAYLAGARWHPDETEKAILKAIALDFTEQDPWLEDVEAWLSWHSYANTKEILEEVFKLEPKEQGQRELRRLNKILNQLGYTEERRIRKEGRHLRIKVNPEKETAPWENISSKNNGNYGTYGTTQTEQGLEMYRNSYRNSEVMAQLTENVPQVDPESTNVPQLDRNYGTAETPTPQASQPICTVIPQKNEKFETIPEKYKKAGFIYRPGEYVRHKVNGEVVKILKFPPIGSEFAAKVYLCLSDSAGETKIEQRHLAPLE
>NZ_CP016474.1|WP_157094732.1|2012207_2012417_-|hypothetical-protein
MAKDGLQAADWAYYALLFLPLVTGIVGFYFWGKAILFYPAIPEQRLKPLLYVSCVLMGVPVAGEFWRRK
>NZ_CP016474.1|WP_083998001.1|2012458_2013163_-|CHAP-domain-containing-protein
MIEKILSAARAEIGYKESPPGSNRTKYGRWYGMDGQPWCAMFTSWVFDKAGFPLPKIQTGAPSGAAYCPYIEGYARRVGQWHKTPRAGDLALFHFGNRLAVHIGIVETVNGSGFSSIEGNTSAASNANGGMVQRRSRRVPQCRGFYRPMDIQARTGKDAYHRLIRLRRPYMEGGDVRAWQQQVNHWGYKIEIDGVYGAESEKTCIELQEKWGLEVDGVIGPITWERTFKPSSEV
>NZ_CP016474.1|WP_157094733.1|2013155_2013419_-|hypothetical-protein
MTILIASFWAALKTLLTFWEKWQTVAKSPQQITAELEKVESQLETMWRKFDDLAALTDTRLDSLERKLSYLAGTIRIQIENLEGHRD
>NZ_CP016474.1|WP_065714350.1|2013445_2013661_-|hypothetical-protein
MTCPQIATKEDIAALEGRLIESLHAKIEAEISALEARLVGTGQQVTLAEIKTVIEDSINLPYELEITTLQP
>NZ_CP016474.1|WP_065714351.1|2013660_2014122_-|hypothetical-protein
MAIFDQFGQWESMGTIVPSFDWQFLPLFAKTPHSTFRIKFFGMGDRTWYPPIHVRNSFFTGAEYLFDRRWVKLWPKDEPETFQLPYPPDMIAQPLPQRQIQIKLASRWRYYDLNPQGYMVEIWEKTDSEVVYPVPETQEQQPVTQLFRILRRR
>NZ_CP016474.1|WP_065714352.1|2014131_2014344_-|hypothetical-protein
MSLILTPGDPEFDFVMDNMPPPPNWRTHDPHGDTGLIQDLETGVWNPVNQQEFLEVLYEQGDLYLSDEES

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Crispr_ID: NZ_CP016474_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016474_2

2246782-2246889

Orphan

Consensus_repeat	Method
GTTAGGAGAGGGTCAACTACCTCCCTCAAGGGACAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016474_2

>merge|NZ_CP016474|2|2246782-2246889|CRISPRCasFinder
GTTAGGAGAGGGTCAACTACCTCCCTCAAGGGACACTGACAGAGCGCTTGAGTATGTTCAATCTGAAATTGAGTTAGGAGAGGGTCAACTACCTCCCTCAAGGGACAC

>NZ_CP016474|2|1|2246782-2246889|CRISPRCasFinder
GTTAGGAGAGGGTCAACTACCTCCCTCAAGGGACAC	TGACAGAGCGCTTGAGTATGTTCAATCTGAAATTGA
GTTAGGAGAGGGTCAACTACCTCCCTCAAGGGACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016474.1\|WP_065714541.1\|2246922_2247780_-\|urease-accessory-protein-UreD	unknown	unknown	gnl\|CDD\|223899
NZ_CP016474.1\|WP_083998072.1\|2252587_2253025_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714543.1\|2248049_2249522_+\|glycogen-synthase-GlgA	unknown	unknown	gnl\|CDD\|234809
NZ_CP016474.1\|WP_065714539.1\|2242097_2244479_+\|DUF4129-domain-containing-protein	unknown	unknown	gnl\|CDD\|224224
NZ_CP016474.1\|WP_065714538.1\|2241089_2241689_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|237124
NZ_CP016474.1\|WP_157094743.1\|2251419_2251905_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714549.1\|2254511_2255030_-\|DUF2726-domain-containing-protein	unknown	unknown	gnl\|CDD\|371282
NZ_CP016474.1\|WP_065715314.1\|2244857_2246039_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP016474.1\|WP_157094742.1\|2240670_2241093_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714535.1\|2237144_2240090_+\|calcium-translocating-P-type-ATPase,-PMCA-type	unknown	unknown	gnl\|CDD\|319776
NZ_CP016474.1\|WP_065715312.1\|2234846_2235920_+\|septal-ring-lytic-transglycosylase-RlpA-family-protein	unknown	unknown	gnl\|CDD\|223868
NZ_CP016474.1\|WP_065715313.1\|2235957_2236941_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226952
NZ_CP016474.1\|WP_065714536.1\|2240093_2240588_-\|Spy/CpxP-family-protein-refolding-chaperone	unknown	unknown	gnl\|CDD\|197366
NZ_CP016474.1\|WP_065714540.1\|2246045_2246720_+\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|274056
NZ_CP016474.1\|WP_065714545.1\|2250056_2251403_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_CP016474.1\|WP_157094744.1\|2255064_2255322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714544.1\|2249663_2249945_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016474.1\|WP_065714534.1\|2232142_2234392_-\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_CP016474.1\|WP_065714548.1\|2253101_2254397_+\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NZ_CP016474.1\|WP_012307731.1\|2252169_2252457_+\|YggT-family-protein	unknown	unknown	gnl\|CDD\|376765

Protein	Function_ID	Function_description	E-value
NZ_CP016474.1\|WP_065714541.1\|2246922_2247780_-\|urease-accessory-protein-UreD	gnl\|CDD\|223899	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones].	8.20814e-79
NZ_CP016474.1\|WP_065714543.1\|2248049_2249522_+\|glycogen-synthase-GlgA	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
NZ_CP016474.1\|WP_065714539.1\|2242097_2244479_+\|DUF4129-domain-containing-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	8.83391e-25
NZ_CP016474.1\|WP_065714538.1\|2241089_2241689_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|237124	PRK12518, PRK12518, RNA polymerase sigma factor; Provisional.	1.91328e-100
NZ_CP016474.1\|WP_065714549.1\|2254511_2255030_-\|DUF2726-domain-containing-protein	gnl\|CDD\|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	8.20037e-09
NZ_CP016474.1\|WP_065715314.1\|2244857_2246039_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	9.14864e-127
NZ_CP016474.1\|WP_065714535.1\|2237144_2240090_+\|calcium-translocating-P-type-ATPase,-PMCA-type	gnl\|CDD\|319776	cd02081, P-type_ATPase_Ca_PMCA-like, animal plasma membrane Ca2(+)-ATPases (PMCA), similar to human ATP2B1-4/PMCA1-4, and related Ca2(+)-ATPases including Saccharomyces cerevisiae vacuolar PMC1. Animal PMCAs function to export Ca(2+) from cells and play a role in regulating Ca(2+) signals following stimulus induction and in preventing calcium toxicity. Many PMCA pump variants exist due to alternative splicing of transcripts. PMCAs are regulated by the binding of calmodulin or by kinase-mediated phosphorylation. Saccharomyces cerevisiae vacuolar transporter Pmc1p facilitates the accumulation of Ca2+ into vacuoles. Pmc1p is not regulated by direct calmodulin binding but responds to the calmodulin/calcineurin-signaling pathway and is controlled by the transcription factor complex Tcn1p/Crz1p. Similarly, the expression of the gene for Dictyostelium discoideum Ca(2+)-ATPase PAT1, patA, is under the control of a calcineurin-dependent transcription factor. Plant vacuolar Ca(2+)-ATPases, are regulated by direct-calmodulin binding. Plant Ca(2+)-ATPases are present at various cellular locations including the plasma membrane, endoplasmic reticulum, chloroplast and vacuole. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP016474.1\|WP_065715312.1\|2234846_2235920_+\|septal-ring-lytic-transglycosylase-RlpA-family-protein	gnl\|CDD\|223868	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane].	6.46016e-42
NZ_CP016474.1\|WP_065715313.1\|2235957_2236941_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226952	COG4586, COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	2.50093e-158
NZ_CP016474.1\|WP_065714536.1\|2240093_2240588_-\|Spy/CpxP-family-protein-refolding-chaperone	gnl\|CDD\|197366	cd09916, CpxP_like, CpxP component of the bacterial Cpx-two-component system and related proteins. This family summarizes bacterial proteins related to CpxP, a periplasmic protein that forms part of a two-component system which acts as a global modulator of cell-envelope stress in gram-negative bacteria. CpxP aids in combating extracytoplasmic protein-mediated toxicity, and may also be involved in the response to alkaline pH. Functioning as a dimer, it inhibits activation of the kinase CpxA, but also plays a vital role in the quality control system of P pili. It has been suggested that CpxP directly interacts with CpxA via its concave polar surface. Another member of this family, Spy, is also a periplasmic protein that may be involved in the response to stress. The homology between CpxP and Spy suggests similar functions. A characteristic 5-residue sequence motif LTXXQ is found repeated twice in many members of this family.	7.89852e-19
NZ_CP016474.1\|WP_065714540.1\|2246045_2246720_+\|HAD-IA-family-hydrolase	gnl\|CDD\|274056	TIGR02252, Rhythmically_expressed_gene_2_protein, REG-2-like, HAD superfamily (subfamily IA) hydrolase. This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.	2.21695e-75
NZ_CP016474.1\|WP_065714545.1\|2250056_2251403_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP016474.1\|WP_065714534.1\|2232142_2234392_-\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.02102e-64
NZ_CP016474.1\|WP_065714548.1\|2253101_2254397_+\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
NZ_CP016474.1\|WP_012307731.1\|2252169_2252457_+\|YggT-family-protein	gnl\|CDD\|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	2.12389e-11

>NZ_CP016474.1|WP_065714540.1|2246045_2246720_+|HAD-IA-family-hydrolase
METQPKVIFFDAVGTLFGVRDGVGATYAKIAQRHGVSADPDRLEQGFRQSFKHKPAPAFPNIGAELIPKQEFLWWEAIAQETFNTAGVIDQFPDFRAFFTDLYQHFATAEPWFIFAETLASVQAWHAQGIELGLISNFDSRLLQVLDALELASYFQSVTISSLTGVAKPDPKIFQTALAKHDCQPEEALHIGDSRLEDYEAAKRLGMQAHLIERDQPFPYSRQP
>NZ_CP016474.1|WP_065715314.1|2244857_2246039_+|NAD(P)/FAD-dependent-oxidoreductase
MSQPHIVIIGGGFAGLYTALRLLQFPWETSQRPEITLIDRQDHFVFSPLLYELITEEMQPWEVAPTYTELLRHGPVKFVQAQVQTIDPEQKTVVCGDRQITYDYLVIAAGGTTKFVDLPGIKEYALPFKTLNDALCLKEKLRALETSAAEKIRIAIVGGGYSGVELACKLADRLGDRGRLRIIDRGDEILKNAPKFNQQAAKEALEARGIWVDYATEVTEVTADSLSLRYKGEVDTIPADLVLWTGGTAIAPWVKDLALPHADNGKLEANAQLQLQDHPNIFALGDVAQTDETLPMTAQVAIQQADVCAWNLRSLITNKPLLPFKFFNLGEMLTLGENNATLSGLGLELEGNLAHVARRLVYLYRLPTWEHQVQVGLNWLVQPLAKLLAQSAK
>NZ_CP016474.1|WP_065714539.1|2242097_2244479_+|DUF4129-domain-containing-protein
MTSPSPQRLKPKSFADLVAQFRNFPKPQSEDSALLRALVQLLVVVGIIATDVASEGNMIWFGWPISVLAVPLTLLGGVWSWQNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLVLAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVSQTLTFAPWLILFLAIALPVLVLDYRSRLGLAGLETILWPQRSSSRKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIMPRFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGSENTDGATFGNSPGTGEGSSPSEGQGELDKTQYYGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRYTGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNQVEKKRIIQSYTAVLSLPNIVPAMQYPTELYFPTAEIGQDPEGNLRSPLGLLEGLTYTAVSKVPYRNRTQLAAAGTDYPPFITEKYLDVPPALKAEVQAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFAEDEDLVEAFLFKYKGGYADHYATVLTIMLRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEAYFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVAGWVPSPILGFFEGLWFTTLKILGYVVSRLWGFVSSGLVGAVTGAIAVVIASMGGWFVIKQIRSWFQRRRFAQLPMMEQLYQQMLLLLQNKGHQKQRTQTPWEFLRAIQQQYRPETLEILTELTEAYVNWRYGEQPANTDYLKQQLKRLQRSFYRGRS
>NZ_CP016474.1|WP_065714538.1|2241089_2241689_-|sigma-70-family-RNA-polymerase-sigma-factor
MPDQAVDHPTAISDRELVCLCQGKIGSIRGQRDRQSFRILYRRYHHKVRSTLYQLCGVALLDDLVQEVFLKAWQGLPRLKNPDYFATWLYRIAWNVATDQRRRFAKQMTLITGLEAQIGAVADPGPEGLSQIYYQDLVQRGLQSLSLEHRAVLVLHDLKDLPQKEVAEILGIPPGTVKSRLHHARRSLRQFLEAQGVSL
>NZ_CP016474.1|WP_157094742.1|2240670_2241093_-|hypothetical-protein
MNFHDHDNLIRFLKNHEPYGPPPPADHEDRLLARLNHTEPSNLTIPPQGKWWFPAMVAAGLVLVVGHGQLHQEFGALPEVMPQQYWGRSEQPQPKAIAERADKELEAFLEESWSYSFGEHLYQEQELSYEYVDFVVDTYP
>NZ_CP016474.1|WP_065714536.1|2240093_2240588_-|Spy/CpxP-family-protein-refolding-chaperone
MFKKQVLMASAVALSLTGQMAIADSTTTLTNFTASPTPVLVSQGDDREADLIDKLDLSAAQRQQIQGIRANYRSQMGAKRAAVQQAKNAMRTLMRNSTTTRNQLEAQHRTITNLRQDLANLHFRQMLDIREVLTPAQRAELAQHMAQKQQSTRFQRWRSWFGWR
>NZ_CP016474.1|WP_065714535.1|2237144_2240090_+|calcium-translocating-P-type-ATPase,-PMCA-type
MTIASPGDRHLPYAGLTAEQVQANRTEYGANVLTPPQRRPWWQLFLEKFTDPVIRILMIAAAVALAVGVLRGEYAEGLGIIVAILLATVIAFFNEFKANQEFALLNHVYDQVTVKVIREAQYLSLPRQDLVVGDIIYIEQGHEVPADAKILESVSLHIDQAKLTGESEPASKSAQADPFEMEAEQSAYPFNCVYRSTIVTQGHGFCEVIAVGDRTEIGKLAQAVATVEDDPNTPLNQQLETLSKAIGVVGLTVALLTFIALLIRGLLTQELMLTGSQGYVMACLLGAIAVMSAPVWLPVLEDGQELLKRLGALPKVLDFPIPAALKNTPLMLLGGSLWLGSSLGYGVATRWLSPTVGEWLPLEVGLALLNYFMVAVTIIVVAVPEGLAMSVTLSLAYSMRRMTAENNLVRRMHACETIGATTVICSDKTGTLTCNQMHVHETCIPGLVDAEPEQATHIRQVLAEAIAANSTADLEYATQALPTVIGNATEGALLLWLDQQNLDYLDYRYNFDLSSQGAFSAEKKYMTSLGKSPILQEEVLYVKGAPEVVLRHCDYQLSAAGVVPLTEQTSIIKTLQAHQSRGMRTLGFAYRPLGDLKHFKITEIERHLVWLGFLAIIDPLRDDVPAAIKACLRAGIQVKIVTGDSPQTAREIGRQIGLWHQSEEAHFETFHLTGPQFAAMDDDTAREAVKSLKILSRACPLDKLRLVKLLQQTGEVVGVTGDGTNDAAALKQAQVGLAMGSGTAIAKEASDIILLDDSFSSIVNAVLWGRSLYENIQKFLLFQLTINVVALGTALLGPFIGIELPLTVTQMLWVNLIMDTFAALALATEPPNPEVLERSPRQADAFIITEAMAKQIAFLGCGFLVLMVGILKYQLRDGTINTYELSVFFAIFVFLQLWNLFNARCFGLSISAFTGLSKNPAFSAIIATIFIGQVAMVQWGSSAFRTVPLTYRDWLWIIGGTSAVLWLGEIWRKVQGSLQKS
>NZ_CP016474.1|WP_065715313.1|2235957_2236941_+|ATP-binding-cassette-domain-containing-protein
MPIIEVDSLSKIYPVALKQPGFKGTLKHFFQRQYRQIKAVEEISFTIEPGEIVGFLGPNGAGKTTTLKMLTGLIYPSMGVVRVAGAIPFQRQRAFLKQISLVMGQKQQLLWDLPALDSLRINAAVYDIPEPVFEERLEELSTMLSLEGKLTQPVRKLSLGERMKAELLAALLHHPQVLFLDEPTLGLDVNAQVAVRDFLREYNQRYGATILLTSHYMADITALCERVLLIYQGQLIYDGNLERLLDQFAPYREVRVELTETYSREALSFFGEVEHIDGQAVRFLVKRENLTQSIAKILENLPVADLSVNDPPVEEVIGRVFSEGIVA
>NZ_CP016474.1|WP_065715312.1|2234846_2235920_+|septal-ring-lytic-transglycosylase-RlpA-family-protein
MGLGTAAVNLAPFQSKAIATSPDQVKTVSLKAQRETLAENPLCRLASALDKAPEAKLVADTNPEQLTPQVSKWWAFNLFQRFTQSLGLDSLLQLEAPMAAAPLVAVVPAPEAISQTASDSGAQLISYDPDRPATNPQSHQLWLQNKPVATIRSQQQAERLAQRLEQLTAMAEFQPTAITPTLHQDKPAIAFGDDILLVVDETITHEDVLNHEILAIQWANNLRLALGVPALDMVTAQQQMYQLEETGQSLEGLASWYGPYFHGRLTANGETYDQYALTAAHPSMPLNTYLKVTNLNNNRSVIIRLNDRGPYIPPRSLDLSLGAARCLNSVETGVIPYKATIMEPKSPEPEVIAPDMI
>NZ_CP016474.1|WP_065714534.1|2232142_2234392_-|ATP-dependent-helicase
MNHLSVHQQQFLTQLAAGLRPGQEALAQWQSGQMAIAAVPGSGKSHALAVAAVLTLARQSLYHGQQLVIVTFTRAAAEGIKQKILTHLKAAQLPVVGFSVQTIHGLALQIASRHPEVSGVDLDSLSLQDIPANHPILRTAVEQWIQTHGERYERLCQGARSDQEKTEQLRRRFALSTEILPHLAHTVIHESKSSNLSPQAVAQLGETLEDPYQSLAIAAGIYQNYQQLLQQNNVLDYDDLVLGAIRVLQQPELQQYWQGQIYGIFEDEAQDSSPLQEQLIRLLATVPQSGECNLVRVGDPNQAINSTFTPADPFYFNRFCQAVNCAEIHYAGRSSLPIITAANQMLHWASHTLSPPDRFAFRWQEIFPVPNHDPQRNANPDPVGAGVELHYPKDIYATVQQLGDRLETLLTANPDHSAAILVRKQRQAKFVIEQLRERFQPTTIRLYDARSGNDANHLVLELYQILRFLERPHSPDCLKGALDVLGDRQKIPTQDLARLATYPEQFLYPGPLDPALSSDPAQAAQTLCVQLLQARWQLPHYQLLPFLAIALDYSDVELATVQKLAERIAQQTQGQKNLRQTLDVLEMLLRDGFEGIELDTDARYTRPQQITVITMHKAKGLDWDYVFIPFLHNSEIPGTSWVPSGAQFLGDYNLAEVARAQIRHFVHGQDQGRSPTAPATISTLWQEAQQLKIEEEYRLLYVAMTRAKRLLWLSAAKQAPFSWSTFKPHQSSLQSQEPCPIFAVLQKKI
>NZ_CP016474.1|WP_065714541.1|2246922_2247780_-|urease-accessory-protein-UreD
MQDQQQVIHKAQPWHGKVGLIYGQRQGKTEMQRCFTQAPFRIQRPFYPEGDRICHTVLLHTAGGIVGGDRLSLDLELQPESHVFLTTAAANKIYRTNGETARQDGVINQAPGSILEYFPQEMIVFDGAEYHQSFRINLAPRAVWCGWEILRFGRTARGEKFISGNWRGMTEIWQGDELLWGDRQWLPGNPEVFAAWNGLNNQPVVGSLALVGLEVSEAQISELRQTMAVLQKGLGGITQLPKGVLCRYRGHSSTEVKRWFISLWQNWRSLYSPQPPVMSRVWQTY
>NZ_CP016474.1|WP_065714543.1|2248049_2249522_+|glycogen-synthase-GlgA
MYIVQIASECAPVAKVGGLGDVVYGLSRELSLRGHCVEIILPKYDCLRYDHIWGMHEAYRDLWVPWFGGAVHCTVFYGWVHGQQCFFIEPHSGDNFFSRGFFYGALDDHMRFAFFSKAALEFLQKSNKRPDIIHCHDWQTGLVPVMLFEMYKWHGLWNQRVCYTIHNFKHQGIVGADVLWATGLNNEGYYFHYDRLRDNFNPFALNCMKGGIVYANAVTTVSPHHAWEAHYTDIGCGLSHTLHLHQDKFKGILNGIDYSTWNPEVDHNIELQYGWDSLENKAKNKKALRDRLLLEDNDRPIITYIGRLDDQKGVHLVHHAMYYALNRGAQFVLLGSATEGSINSWFWHEKFHLNDNPNCHIELGFNAELSHMIYAGADMLVVPSNYEPCGLTQLIALKYGVVPIVRGVGGLVSTVFDRDHDDKHPPEERNGYVFYQTDNHALESAMERAIGLYTVYPEEFRKLQIQGMKYDYSWNNPGNEYIDLYEFIRA
>NZ_CP016474.1|WP_065714544.1|2249663_2249945_+|hypothetical-protein
MDAFSPYPPEWIKNASHALSFHCPSCEALPHDAKRAWLNRYAPVTDALHRRRWQEFYECQCGTVWWAWSSDRPPSRYQTDDRGENDEFRRGLF
>NZ_CP016474.1|WP_065714545.1|2250056_2251403_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MQFSKILIANRGEVALRIIHTCQELGIATVAVHSTVDRQALHVQLADESICIGPPQSSKSYLNIPNIIAAALSSNADAIHPGYGFLAENAKFAEICADHQITFIGPSPEAMIAMGDKSTAKKTMQAAKVPTVPGSAGLVASEEQALEIAAQIGYPVMIKATAGGGGRGMRLVPSAEELPRLYRAAQGEAEAAFGNGGVYIEKFIERPRHIEFQILADQYGNVIHLGERDCSIQRRHQKLLEEAPSAILTPRLRDKMGKAAVKAAKSIDYVGAGTVEFLVDKNGDFYFMEMNTRIQVEHPVTEMVTGLDLIAEQIKVAQGDRLSLNQNQVHLNGHAIECRINAEDPDHDFRPTPGKISGYLPPGGPGVRMDSHVYTDYEISPYYDSLIGKLIVWGPDRDTAIRRMKRALRECAITGVSTTIGFHQKILNHPAFLAADVDTNFIQQHMLP
>NZ_CP016474.1|WP_157094743.1|2251419_2251905_-|hypothetical-protein
MKKFILPVFFLCALSLGGCGMVQEMIFEKAIEAGSGEKVDIDMSQESVDIKTNEGNLSVSSGDNVKLPDTFPKDIYFDKNAEIRMAMDLPEGVSVTFVSNESVAAVKDKYTAEMAKNGWSQEMTMDVNGQSMFGFQKQDRASQIMIYEDQGQTLVQVTAKK
>NZ_CP016474.1|WP_012307731.1|2252169_2252457_+|YggT-family-protein
MSWLAVTSLGLNLLLGAMTLFFIFRIVLTWYPQAELTKLPFSLVVLPTEPLLAPTRKLVPPLGGIDISPVIWVGIVTLLREVLLGQQGLLVMLLR
>NZ_CP016474.1|WP_083998072.1|2252587_2253025_+|hypothetical-protein
MGLAIAPVMAQPLPKQAIFENLQLRPSFAPNPQLLRGVSGGSEQAADFLGIEDTPTGPCVGFIDSHADHRLSLMTFFNDLKLSVESSGDTVLVVKGPGGVWCNDDAVGQNPAIRGEWQKGQYQVWVGSRTQRQYYPYVLEIHYRK
>NZ_CP016474.1|WP_065714548.1|2253101_2254397_+|homoserine-dehydrogenase
MAIGIGLLGLGTVGTGTAEILLSPQGRHPLLGEVVLKRAGVRSLDKPRNIDLPAGCLTTDLEAIVKDPEIQVVVELLGGLEPARTLILQAIAHGKHVVTANKAVIAKYGEEIYTAANEAGVYVLLEAAVGGGIPIIKPLKQSLGVNRITRVIGIINGTTNYILTQMTQHGADFGEVLAEAQKLGYAEADPSADVDGGDAADKIAILASLAFGGRINREDVYCEGIRSISAVDISFATKLGFVIKLLAIAERPDLEEDALQLRVHPTLVPEDHPIASVNGVFNAILVEGEPLGQVMFYGPGAGAGATASAVVSDIVHVVGLLHSDQVVQKLNPLLGCTHEHYSKILPIDTLKTRFYARFLSRDLPGVIGDLGTCFGQHQVSLESVVQIGLQDDCAEIVVVTHDVHEANFREALREIEGLEAIKEVPSILRVL
>NZ_CP016474.1|WP_065714549.1|2254511_2255030_-|DUF2726-domain-containing-protein
MNVLPNTDAFVTSAHNINFQNGEIINDYEAFILELIEMLLGDRYRCWGQIPLGVICARPDDVPYLPTDLFKFWANSRVDIALLEKRIGVSRKAKLVIECQSHWHDTHEAQIRDRLKSQLLQSAGIPLIYVRRVDTDSRFYRFFTPDQSQEVLYNIITQAGKDELNEFLCQFL
>NZ_CP016474.1|WP_157094744.1|2255064_2255322_-|hypothetical-protein
MTTTQLSLFPEQNTMLSFPHRKTPHLHVIKLQVTTKRAAAMLGVGESTLCQAKRRGQTIYRKDDMEARYVGKGKKSFLWMIVQYR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP016476

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016476_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016476_1

133101-137011

TypeIII

Consensus_repeat	Method
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CRISPRCasFinder
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CRT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	PILER-CR

52 spacers

cas10,cmr3gr5,cmr4gr7,cas2,cas1,csx18,WYL

The CRISPR arrays of NZ_CP016476_1

>merge|NZ_CP016476|1|133101-137011|CRISPRCasFinder,CRT,PILER-CR
TCTTTCAATCTATTAGCTTCTCAAGTAAAGAGAAACACCCCTCCCACCAGGGCGAGATTGGATTGTTCACCATGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTTGAAGCAACCAAGTAAGACCTAATCTGATTCCCGCTTCCTGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTGTTGGCATTCGCTGCTACCGTCAATGTGACGTAAAAGCGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCTCCTGGGTGTCGCTGATCGAGAACCGGAACCTCCTGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAATTTTAACCATGTTTAACTTCAAAAATCTCTTTTCGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAAACCTAGATTAGTCCGTCAATCTGTCGGTGCAGCGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCACTTTACATGGTCCGCCGTGACATTTTTCATCTTTGGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACATGACCGTTTACAAACCAATTGAACTTGGAGGTTCAAAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCTTCAATAACGAAGTTGATGAGATCATCATTGAGGGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACATCGACATTGCTATATTTCCCGCCTACTGACTGGGATGGTGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAGAAAAAGAAATGGAAATGGAGAAAGGGCTGCAAGGGCGTAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGTAACACACTACAAACAAACAAGGAATTAAAACAATGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAACCATGAGGATGTGAACTCTGCCCATTTCGACCACCACGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCTTTTGGAGTCGCTGCGGAACTTTACCAGACATTAGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACATTTAGAAAGTGATCAAATGTTCCAAATGCTGCTCATCAAAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACATTAGCGTCAAGACAGTTGGAGTTTATGTTGTCGTTAGCGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTGATTATCGCTGCTATTTACGACGGCAAGCGTACCGAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAGAGGGGTTAACCTTTAAGACTATCATTGTCAACAGCGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTCTGGTCATAAAATCTCTCTCTATGGGGAGAATCAGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTTGGAGGGCTTATTAATTAACCGTCTCGAAGAGGTACATCAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAAGGTTCACAAGGCTTCATTCCACAAACACTTGTGGAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCACGAAGCTGCTGCTCCTGACGGACAAGGTCAAGGAGGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGAGGTGTCTTATGAAGCCAGTTGGAAAGAAGAAGAGAGCGAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAGATGATGGAGGACATCATGACTAAAGCGGCTGAACAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAGAAGCAGGGTCGTACCATCCGCTCCGAAGCGGCAAAAGCGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTCAAACCAGAGGGGATGTTTGATGTCACGGTGCAATTTGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGTGACCGGAGTATATGTACCCTCCCTTCTCTTCAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCTGATGCTTTCCTGCAGTTACTGCTGGTCTTACGCACTGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGTCGAACTGATCCAACTTCTTCAGCACAATAGAGTGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCCTCTTTCTGTAGCTTCACTAACAAACTGGGTTGAACACCAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTCGCTATGACTGGGCCATGGGAATGCTCAATATTGCCATGGACACCCTGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGCAAGACACCTTGGAGTGCTGGAAGTGGTTGCGTAACAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTAATCGACCTTTAAAGATGTCATACAGCTTAGACCAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTTTGGAGGGGAAACCTCGAGTACGGGATCTCTTCCAATGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTGTAAACAAGATTAGCGGTACTCCTACAAAAAGGGCTGTGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCGTCAACGCCAAAGCTCGCAAGCAATGGCGCAAGGGCGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCAACTTGCCAGATTGAGATTTGAGAGCCTGTGCTTCCTCCAGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGCCTTCACAATATAGGGCGACTTGCCGAAGAAGAGTATGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGAAGGACTTTGACAAAACCCTTCGTACTGATGAAGGGTTGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTCAAGGAGTTAGCCGTTTCCCGGAAACGGGTGCAGGATGCTATGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACATGAGATCTTTAAGCGATAATTGAAGAAGGCTGTGTCAGCGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGAGATGTTAGAAGCAGCAACCGAGGACATGGAGTCTGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTCGGTGAGTGTAGCGTTCAAAAGATTCAGTGTGGGGATGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGGCCGCTAAGAACGCATCTGAGCTTAAAACCTTGGAAAAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACAAGTTGCGCGACAACCCCAACGTCATTGCCTATATCGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGCCTGGGTATTTTGTCATGACTGTTTACCAAGATGCAATGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCTAAGCTGCTTGCTCTGGCAACCAAGTGGGCTAAGTCCCACAAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACGGGGGAATCAGGTTATTTACGACGGCGTTTCTTCATGGTGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTTGTCTACGATGACCCGGAAGACCCTATCGAGGAGGATGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACTTGTTTATAGTGGGTTTAATAATATGTTCGGTTTTAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACCCCTTTTTTTAGGAGCATCGCTAATTTGTATACTTTAAGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAACACCTCATGGAACAGACTGAGGATATGGAGTCCGTCAGGTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC

>NZ_CP016476|1|1|133101-137011|CRISPRCasFinder
TCTTTCAATCTATTAGCTTCTCAAGTAAAGAGAAAC	ACCCCTCCCACCAGGGCGAGATTGGATTGTTCACCAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGAAGCAACCAAGTAAGACCTAATCTGATTCCCGCTTCCT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGTTGGCATTCGCTGCTACCGTCAATGTGACGTAAAAGCG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTCCTGGGTGTCGCTGATCGAGAACCGGAACCTCCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AATTTTAACCATGTTTAACTTCAAAAATCTCTTTTC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAACCTAGATTAGTCCGTCAATCTGTCGGTGCAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CACTTTACATGGTCCGCCGTGACATTTTTCATCTTTGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATGACCGTTTACAAACCAATTGAACTTGGAGGTTCAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTTCAATAACGAAGTTGATGAGATCATCATTGAGGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATCGACATTGCTATATTTCCCGCCTACTGACTGGGATGGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAAAAAGAAATGGAAATGGAGAAAGGGCTGCAAGGGCGTA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTAACACACTACAAACAAACAAGGAATTAAAACAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AACCATGAGGATGTGAACTCTGCCCATTTCGACCACCAC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTTTTGGAGTCGCTGCGGAACTTTACCAGACATTAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATTTAGAAAGTGATCAAATGTTCCAAATGCTGCTCATCAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATTAGCGTCAAGACAGTTGGAGTTTATGTTGTCGTTAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGATTATCGCTGCTATTTACGACGGCAAGCGTACCGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAGGGGTTAACCTTTAAGACTATCATTGTCAACAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCTGGTCATAAAATCTCTCTCTATGGGGAGAATCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGGAGGGCTTATTAATTAACCGTCTCGAAGAGGTACATCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAGGTTCACAAGGCTTCATTCCACAAACACTTGTGGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CACGAAGCTGCTGCTCCTGACGGACAAGGTCAAGGAGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAGGTGTCTTATGAAGCCAGTTGGAAAGAAGAAGAGAGCGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGATGATGGAGGACATCATGACTAAAGCGGCTGAACA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAAGCAGGGTCGTACCATCCGCTCCGAAGCGGCAAAAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCAAACCAGAGGGGATGTTTGATGTCACGGTGCAATTT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTGACCGGAGTATATGTACCCTCCCTTCTCTTCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTGATGCTTTCCTGCAGTTACTGCTGGTCTTACGCACT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTCGAACTGATCCAACTTCTTCAGCACAATAGAGTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CCTCTTTCTGTAGCTTCACTAACAAACTGGGTTGAACACCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCGCTATGACTGGGCCATGGGAATGCTCAATATTGCCATGGACACCCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCAAGACACCTTGGAGTGCTGGAAGTGGTTGCGTAACA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TAATCGACCTTTAAAGATGTCATACAGCTTAGACCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTTGGAGGGGAAACCTCGAGTACGGGATCTCTTCCAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGTAAACAAGATTAGCGGTACTCCTACAAAAAGGGCTGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CGTCAACGCCAAAGCTCGCAAGCAATGGCGCAAGGGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CAACTTGCCAGATTGAGATTTGAGAGCCTGTGCTTCCTCCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCCTTCACAATATAGGGCGACTTGCCGAAGAAGAGTATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAAGGACTTTGACAAAACCCTTCGTACTGATGAAGGGTT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCAAGGAGTTAGCCGTTTCCCGGAAACGGGTGCAGGATGCTATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATGAGATCTTTAAGCGATAATTGAAGAAGGCTGTGTCAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAGATGTTAGAAGCAGCAACCGAGGACATGGAGTCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCGGTGAGTGTAGCGTTCAAAAGATTCAGTGTGGGGAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GGCCGCTAAGAACGCATCTGAGCTTAAAACCTTGGAAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAGTTGCGCGACAACCCCAACGTCATTGCCTATATC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCCTGGGTATTTTGTCATGACTGTTTACCAAGATGCAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTAAGCTGCTTGCTCTGGCAACCAAGTGGGCTAAGTCCCACAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GGGGGAATCAGGTTATTTACGACGGCGTTTCTTCATGGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGTCTACGATGACCCGGAAGACCCTATCGAGGAGGATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGTTTATAGTGGGTTTAATAATATGTTCGGTTTTA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CCCTTTTTTTAGGAGCATCGCTAATTTGTATACTTTAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ACCTCATGGAACAGACTGAGGATATGGAGTCCGTCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC

>NZ_CP016476|1|1|133101-137011|CRT
TCTTTCAATCTATTAGCTTCTCAAGTAAAGAGAAAC	ACCCCTCCCACCAGGGCGAGATTGGATTGTTCACCAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGAAGCAACCAAGTAAGACCTAATCTGATTCCCGCTTCCT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGTTGGCATTCGCTGCTACCGTCAATGTGACGTAAAAGCG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTCCTGGGTGTCGCTGATCGAGAACCGGAACCTCCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AATTTTAACCATGTTTAACTTCAAAAATCTCTTTTC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAACCTAGATTAGTCCGTCAATCTGTCGGTGCAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CACTTTACATGGTCCGCCGTGACATTTTTCATCTTTGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATGACCGTTTACAAACCAATTGAACTTGGAGGTTCAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTTCAATAACGAAGTTGATGAGATCATCATTGAGGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATCGACATTGCTATATTTCCCGCCTACTGACTGGGATGGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAAAAAGAAATGGAAATGGAGAAAGGGCTGCAAGGGCGTA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTAACACACTACAAACAAACAAGGAATTAAAACAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AACCATGAGGATGTGAACTCTGCCCATTTCGACCACCAC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTTTTGGAGTCGCTGCGGAACTTTACCAGACATTAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATTTAGAAAGTGATCAAATGTTCCAAATGCTGCTCATCAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATTAGCGTCAAGACAGTTGGAGTTTATGTTGTCGTTAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGATTATCGCTGCTATTTACGACGGCAAGCGTACCGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAGGGGTTAACCTTTAAGACTATCATTGTCAACAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCTGGTCATAAAATCTCTCTCTATGGGGAGAATCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGGAGGGCTTATTAATTAACCGTCTCGAAGAGGTACATCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAGGTTCACAAGGCTTCATTCCACAAACACTTGTGGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CACGAAGCTGCTGCTCCTGACGGACAAGGTCAAGGAGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAGGTGTCTTATGAAGCCAGTTGGAAAGAAGAAGAGAGCGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGATGATGGAGGACATCATGACTAAAGCGGCTGAACA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAAGCAGGGTCGTACCATCCGCTCCGAAGCGGCAAAAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCAAACCAGAGGGGATGTTTGATGTCACGGTGCAATTT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTGACCGGAGTATATGTACCCTCCCTTCTCTTCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTGATGCTTTCCTGCAGTTACTGCTGGTCTTACGCACT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTCGAACTGATCCAACTTCTTCAGCACAATAGAGTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CCTCTTTCTGTAGCTTCACTAACAAACTGGGTTGAACACCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCGCTATGACTGGGCCATGGGAATGCTCAATATTGCCATGGACACCCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCAAGACACCTTGGAGTGCTGGAAGTGGTTGCGTAACA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TAATCGACCTTTAAAGATGTCATACAGCTTAGACCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTTGGAGGGGAAACCTCGAGTACGGGATCTCTTCCAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGTAAACAAGATTAGCGGTACTCCTACAAAAAGGGCTGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CGTCAACGCCAAAGCTCGCAAGCAATGGCGCAAGGGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CAACTTGCCAGATTGAGATTTGAGAGCCTGTGCTTCCTCCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCCTTCACAATATAGGGCGACTTGCCGAAGAAGAGTATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAAGGACTTTGACAAAACCCTTCGTACTGATGAAGGGTT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCAAGGAGTTAGCCGTTTCCCGGAAACGGGTGCAGGATGCTATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATGAGATCTTTAAGCGATAATTGAAGAAGGCTGTGTCAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAGATGTTAGAAGCAGCAACCGAGGACATGGAGTCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCGGTGAGTGTAGCGTTCAAAAGATTCAGTGTGGGGAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GGCCGCTAAGAACGCATCTGAGCTTAAAACCTTGGAAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAGTTGCGCGACAACCCCAACGTCATTGCCTATATC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCCTGGGTATTTTGTCATGACTGTTTACCAAGATGCAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTAAGCTGCTTGCTCTGGCAACCAAGTGGGCTAAGTCCCACAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GGGGGAATCAGGTTATTTACGACGGCGTTTCTTCATGGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGTCTACGATGACCCGGAAGACCCTATCGAGGAGGATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGTTTATAGTGGGTTTAATAATATGTTCGGTTTTA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CCCTTTTTTTAGGAGCATCGCTAATTTGTATACTTTAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ACCTCATGGAACAGACTGAGGATATGGAGTCCGTCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC

>NZ_CP016476|1|1|133174-137011|PILER-CR
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGAAGCAACCAAGTAAGACCTAATCTGATTCCCGCTTCCT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGTTGGCATTCGCTGCTACCGTCAATGTGACGTAAAAGCG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTCCTGGGTGTCGCTGATCGAGAACCGGAACCTCCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AATTTTAACCATGTTTAACTTCAAAAATCTCTTTTC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAACCTAGATTAGTCCGTCAATCTGTCGGTGCAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CACTTTACATGGTCCGCCGTGACATTTTTCATCTTTGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATGACCGTTTACAAACCAATTGAACTTGGAGGTTCAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTTCAATAACGAAGTTGATGAGATCATCATTGAGGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATCGACATTGCTATATTTCCCGCCTACTGACTGGGATGGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAAAAAGAAATGGAAATGGAGAAAGGGCTGCAAGGGCGTA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTAACACACTACAAACAAACAAGGAATTAAAACAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AACCATGAGGATGTGAACTCTGCCCATTTCGACCACCAC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTTTTGGAGTCGCTGCGGAACTTTACCAGACATTAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATTTAGAAAGTGATCAAATGTTCCAAATGCTGCTCATCAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATTAGCGTCAAGACAGTTGGAGTTTATGTTGTCGTTAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGATTATCGCTGCTATTTACGACGGCAAGCGTACCGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAGGGGTTAACCTTTAAGACTATCATTGTCAACAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCTGGTCATAAAATCTCTCTCTATGGGGAGAATCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGGAGGGCTTATTAATTAACCGTCTCGAAGAGGTACATCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAGGTTCACAAGGCTTCATTCCACAAACACTTGTGGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CACGAAGCTGCTGCTCCTGACGGACAAGGTCAAGGAGG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAGGTGTCTTATGAAGCCAGTTGGAAAGAAGAAGAGAGCGA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGATGATGGAGGACATCATGACTAAAGCGGCTGAACA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AGAAGCAGGGTCGTACCATCCGCTCCGAAGCGGCAAAAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCAAACCAGAGGGGATGTTTGATGTCACGGTGCAATTT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTGACCGGAGTATATGTACCCTCCCTTCTCTTCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTGATGCTTTCCTGCAGTTACTGCTGGTCTTACGCACT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GTCGAACTGATCCAACTTCTTCAGCACAATAGAGTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CCTCTTTCTGTAGCTTCACTAACAAACTGGGTTGAACACCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCGCTATGACTGGGCCATGGGAATGCTCAATATTGCCATGGACACCCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCAAGACACCTTGGAGTGCTGGAAGTGGTTGCGTAACA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TAATCGACCTTTAAAGATGTCATACAGCTTAGACCA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTTGGAGGGGAAACCTCGAGTACGGGATCTCTTCCAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TGTAAACAAGATTAGCGGTACTCCTACAAAAAGGGCTGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CGTCAACGCCAAAGCTCGCAAGCAATGGCGCAAGGGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CAACTTGCCAGATTGAGATTTGAGAGCCTGTGCTTCCTCCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCCTTCACAATATAGGGCGACTTGCCGAAGAAGAGTATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAAGGACTTTGACAAAACCCTTCGTACTGATGAAGGGTT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCAAGGAGTTAGCCGTTTCCCGGAAACGGGTGCAGGATGCTATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ATGAGATCTTTAAGCGATAATTGAAGAAGGCTGTGTCAGC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GAGATGTTAGAAGCAGCAACCGAGGACATGGAGTCTG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TCGGTGAGTGTAGCGTTCAAAAGATTCAGTGTGGGGAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GGCCGCTAAGAACGCATCTGAGCTTAAAACCTTGGAAAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	AAGTTGCGCGACAACCCCAACGTCATTGCCTATATC
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GCCTGGGTATTTTGTCATGACTGTTTACCAAGATGCAAT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CTAAGCTGCTTGCTCTGGCAACCAAGTGGGCTAAGTCCCACAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	GGGGGAATCAGGTTATTTACGACGGCGTTTCTTCATGGT
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGTCTACGATGACCCGGAAGACCCTATCGAGGAGGATG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	TTGTTTATAGTGGGTTTAATAATATGTTCGGTTTTA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	CCCTTTTTTTAGGAGCATCGCTAATTTGTATACTTTAA
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC	ACCTCATGGAACAGACTGAGGATATGGAGTCCGTCAG
GTTTCCAATCTATTTGCTTCTCAGGTAAAGAGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016476.1\|WP_065715549.1\|137188_137470_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP016476.1\|WP_065715542.1\|126934_129919_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_CP016476.1\|WP_065715548.1\|132706_132991_-\|prevent-host-death-protein	unknown	unknown	gnl\|CDD\|171099
NZ_CP016476.1\|WP_065715557.1\|144143_144791_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|223881
NZ_CP016476.1\|WP_065715544.1\|130550_130775_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016476.1\|WP_065715541.1\|126542_126899_-\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|319869
NZ_CP016476.1\|WP_065715539.1\|124423_125290_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|224255
NZ_CP016476.1\|WP_065715547.1\|132402_132717_-\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
NZ_CP016476.1\|WP_065715556.1\|143514_143937_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|223917
NZ_CP016476.1\|WP_065715546.1\|131551_131965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016476.1\|WP_083998095.1\|140591_141833_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016476.1\|WP_065715558.1\|145506_146106_+\|exopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|368723
NZ_CP016476.1\|WP_065715545.1\|130777_131479_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016476.1\|WP_065715550.1\|137466_138453_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP016476.1\|WP_065715540.1\|125399_126506_-\|CRISPR-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP016476.1\|WP_065715555.1\|141959_143480_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
NZ_CP016476.1\|WP_065715552.1\|139069_140254_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP016476.1\|WP_065715543.1\|130215_130554_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016476.1\|WP_065715559.1\|146146_149089_-\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_CP016476.1\|WP_065715551.1\|138449_138746_-\|hypothetical-protein	csx18	cls000006_csx18_CAS-I:CAS-III	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016476.1\|WP_065715549.1\|137188_137470_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.62605e-32
NZ_CP016476.1\|WP_065715542.1\|126934_129919_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	8.75051e-44
NZ_CP016476.1\|WP_065715548.1\|132706_132991_-\|prevent-host-death-protein	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	3.4267e-13
NZ_CP016476.1\|WP_065715541.1\|126542_126899_-\|four-helix-bundle-protein	gnl\|CDD\|319869	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins. A family of functionally uncharacterized bacterial proteins, some of which are encoded by an atypically large intervening sequence present within some 23S rRNA genes. The distantly related bAvd protein, which also forms a homopentamer of four-helix bundles, has been suggested to interact with nucleic acids and a reverse transcriptase.	1.30888e-50
NZ_CP016476.1\|WP_065715539.1\|124423_125290_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	9.92148e-24
NZ_CP016476.1\|WP_065715547.1\|132402_132717_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	6.30059e-29
NZ_CP016476.1\|WP_065715557.1\|144143_144791_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|223881	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion].	1.76447e-50
NZ_CP016476.1\|WP_065715558.1\|145506_146106_+\|exopolysaccharide-biosynthesis-protein	gnl\|CDD\|368723	pfam06055, ExoD, Exopolysaccharide synthesis, ExoD. Among the bacterial genes required for nodule invasion are the exo genes. These genes are involved in the production of an extracellular polysaccharide. Mutations in the exoD result in altered exopolysaccharide production and defects in nodule invasion.	1.78778e-47
NZ_CP016476.1\|WP_065715559.1\|146146_149089_-\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_CP016476.1\|WP_065715550.1\|137466_138453_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	5.93138e-112
NZ_CP016476.1\|WP_065715540.1\|125399_126506_-\|CRISPR-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	2.47298e-67
NZ_CP016476.1\|WP_065715555.1\|141959_143480_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	4.24455e-93
NZ_CP016476.1\|WP_065715552.1\|139069_140254_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	2.87296e-17
NZ_CP016476.1\|WP_065715556.1\|143514_143937_-\|biopolymer-transporter-ExbD	gnl\|CDD\|223917	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion].	2.5883e-31

>NZ_CP016476.1|WP_065715548.1|132706_132991_-|prevent-host-death-protein
MLIHETTYSQARANLASILDQVHDQSQIMVIKRRNQKNIALIAEEELSSLLESVYLLRSPANAQRLFNAMEWAAEDQGEPQSLTELKGELGIES
>NZ_CP016476.1|WP_065715547.1|132402_132717_-|Txe/YoeB-family-addiction-module-toxin
MSPRKKKPKDAIKKVEKRLFQPVFSPEFKDDLAWWYRQDRKKGDKILDLVMDILNDDPFVGLGKPEPLKYIAPDTWSRRIDLEHRLVYQIKQNKIYFLQARYHY
>NZ_CP016476.1|WP_065715546.1|131551_131965_-|hypothetical-protein
MVETQKKPIYLPGYAAVEQPFGIDPPNVHCPICGQATFTITADSHNMTPCDHLALIYVGSVGEYVYQSPTFQERTASLGVPDQPFKEFPQYLNQAGYDNQLLLLEITYGGMACGPIWYTDVYGYDYSMIGKETAETA
>NZ_CP016476.1|WP_065715545.1|130777_131479_-|hypothetical-protein
MYEIEPVARVLSETTLYDTPPVFSRAQGLLTHQLNFPTLNEELVIQRIINNYQEKKAQEQSLWRWGGALVGLCLGLGDGLQIGDMVGSAIGASMGNLVSNELNLADEAKLRELNLEWVNTPESYVYHRRRHRGDALRRLLMILPHPNTGRPCASFGVQFPDGYVAHLGILPNFDQPLFSMAGSGFDTDWVNEKQTLGIIPTDIGMSLPVELWRSQRQDSVIAIPYRVPHHCLY
>NZ_CP016476.1|WP_065715544.1|130550_130775_-|hypothetical-protein
MEHSNPLTHKPTLNTIEDDRWQVFQADARRRRLIALGGTTAAIATGIYFQSIWIFLTGEAGLWLALRTWRMLKK
>NZ_CP016476.1|WP_065715543.1|130215_130554_-|hypothetical-protein
MTWHYDDLPPEEQTYLDQRFTAHGLDPELAYDYLIPDVVKAQGPDAIEAFMRQKDISHIYPQSDYPELADQLNNVFLEDPDLNAARGDRLATPDEVWAAHQDNLADAWELFG
>NZ_CP016476.1|WP_065715542.1|126934_129919_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MAGKAYWQAKIWGLLHDPALKALYGNPGRGKEGLWEKLACMEGWASPKSSEEKQASELSGTWLDHVGLCDLISSASDRGIIHYIRTAVDYGAEGLELSHLLSGEKLPLRLQNHAEILGQSSRKTYLEQTEADLIDQMPAEIRDDPEAAQACFWWLWRCLPQAVADKFGAASFLMPAETRLPDGSIWSHASMTAALAGALAGYDTELDDIPKGAQNTPKSHPYLAVFTFSPVQELIKASRKMKDFWAGSWILHYLSAKVCWRLAHKYGADCFLYPSLYGQPLIDHWLLQKHSEFGDWIQPPDDRQLLTAGFPNVIMLVLPEAQVAAAMQSAKNFLLDAWREIAKEVLAELQGDRRWQRDLQESDPSWQGWLDAQWQTYWSAVAIGAKNSSFKSVGIPAPKEKEQKLEDWIKAQNDAFNGNLFTDAERDFFEKATAQFIEQRNRNYAGSLNAGSWWADIFGQTRLALNTVKNARNWKLPTAFGTRSTISGLGPVVHPQGNGQHRDWLTEGEAQHYWQRDAGLFDGIEQLNATETVKRGLEKVLPKLLDRDPTELKAYYPDLTVGVAGYLKTQSEKNGEALNQYQDACRAIRTKITADHHEIANFVRQEWGIPWIDETHDPLFENLPHPRLLNAGWLVEELENLDKEAQKVYRQDLQNEIQKFYPQNNPASWYAIAAGDGDGMSDWLKGTKMEAYEKYFASELLNKLEDKKGEDKTFYQLFEKFSQVTKRMGPATHNALSRALLDFSNKLAPYLTEERYAGRLIYSGGDDVLAYTNLWEWDKWLWDIRQAFRGAEDDQAEFERTGDYWQYQGNHDNLDRPLFTMGKNATISFGLVIAHHSVPLAIALENLWEAEEGAKDHEYEDFTLEGKESRKKKDAVQLRVIYGNGNILKATCKFETFRAWQQLLEITGLEASTFETAATLLEQHPIPTSVAIAPWVSAFVERRSNLNEDQKTFLRSRLTEFLICLWNTTNSKEREKEAKNWLKAAAFNLRNRRI
>NZ_CP016476.1|WP_065715541.1|126542_126899_-|four-helix-bundle-protein
MASQSFEDLVVWQKFHQFVLGVYQLSQQFPKQENYGLTSQLRRAAVSIPANIAEGYKRRTKPDKARFFNIAQASLEECRYYLILAHDLHYADTTNLKKQLEEASKLLNSYTYKLTQSP
>NZ_CP016476.1|WP_065715540.1|125399_126506_-|CRISPR-associated-protein-Cmr3
MYWYTLTPLDILLLRDAKPFTPGERAWAGSVFPPNGHTLAGAIRSLLPQGQQLSLIGSLFSYKETLYFPRPLGFVGSKPLYPLSWHLERSSLKTQMLWDKSQPAPLSTLEPPPSENEQKETEKQYRSWLPATVIDTYLKTGNITDDAWLRDETIEGEKQPWEVESRPHNSIESGTRQVKDADGYFVENGIRLKKGWSLAIALDAATHNHLQSLTAPLTVRLGGEGHRVILEHSPKLDQQWQTIHNTSEQNLQKQGKAIAYLITPGIFERPHKGQATCRPYPWEWKLSHNDGGHFVSLATEKAIPISPRIQLDKDGKKSSIPAPQVFASPPGTLYYLDQPQTPNHPRTQRNRDLGYSHLLWVNYSESKN
>NZ_CP016476.1|WP_065715539.1|124423_125290_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFDFRLGYLYSLAPIHCGGEGDLGNILDIVREAHTDFPYIPGSSLRGSIRNELAVLDFSAADTLFGKELSGEGQMGVHQVWFGDARLLWVPMRTMSLNGQQDVFTWVSCHSLIRDHAICAQTTYPSFPNHAVGTRSGTFIVADAQINVSSMNDDQKKICNLATKFPERLGKAVQQTWQDNRVVLSDSDFYTLMEHSLWTQIRNKIQDSDDGANREGSAEVFWTDICIPRDTVFYFSWGYNPLQNNSLTQQHHQQLLDIIQGLIQVGGQANVGRGWLQAWVAKDASPVQ
>NZ_CP016476.1|WP_065715549.1|137188_137470_-|CRISPR-associated-endonuclease-Cas2
MMFYLVAYDICDNKRRKKIADLLEGYGVRVQYSVFECHLSPKKYKELKKRLLRHYKEDKGDSLRFYPVSGHTLSQVEVWGSPPLTCPPSSTII
>NZ_CP016476.1|WP_065715550.1|137466_138453_-|CRISPR-associated-endonuclease-Cas1
MRTLYVSEQGCYLRLRQEYLGVWRQQACLTEIQLPHLEQVLIFGQSQLSTQAIRACLWRDIPIIFLSRMGFCYGRIMALERGYRHLSRYQQALSTVDKLTVARAIAGAKLQNSRVLLQRQQRKRPLEPVAFAIESLGYLRQQISVADSVERIMGLEGAAAASYFNGLSYCLRNDQFPFMGRSRRPPLNPVNALLSFGYQVLWNHLFSLIEIRGLDPYQGCLHQGSERHGALVSDLIEEFRAPIVDSLVLYLVNKNIIKPDHFIYRDGGCFLNQGGRKVYLSAFVQQMETTISIEDRQEPRWHLLTRQVRAFQNFVYRPVLGYAPYEIR
>NZ_CP016476.1|WP_065715551.1|138449_138746_-|hypothetical-protein
MYLSSRGIVVRNLAAALINGAITLVILLIAPLGLAAVIMNTILVGLSTFFVCSAMDLVSAWLLGGATPPQSLGATRRGDLTQTSRQKDIYPYGDRQDR
>NZ_CP016476.1|WP_065715552.1|139069_140254_+|WYL-domain-containing-protein
MPKVSTTHPYSDQKSFERLLVLITALVRFPGVGCPDVDGMGHRAGHHNALAAVQEKWQAIARELNIDFKPNYPSLATIRKDFSFLRTYGILENRMYRWGYYLGTGVFSAADLQLALNGMAAIAHDLGDFRYRQALEKIQRYLRGFDFKDLDPTYPIRQNRNHPVNQTDPELMMAQGEYRHTLFHHLPDLEAAIWKGQKIEISRHSSPYTEKYLGLQQVWPLQLIFYHVAWYLLYEDCQTGCLVVGRLNRFAEHFRIIDPQGRGLDKQRERLAIAHQLLEQGWGLRLGTAEEQQAELRGTTELIPIKVRFFDGAAMIALEAEQRHPSQQIRKGPKASRGYQPKYIDYSVTLPRRSLPEFMRWLMRYGENAQILAPDFLIKQHQQIAQQLLQRYTS
>NZ_CP016476.1|WP_083998095.1|140591_141833_+|hypothetical-protein
MTAFAMITADSDYLLNQVSRCAATLYNWLLRKRPAGTTFEADLDIFRHWTGTFRSQPYCFKWIRQAITELADIGLVDIQRQYNSKIYKLAAYRPGNKTSQTENKTSQFGNKTSQKRASNPDAAVPSYIDTKDSTDQACSAVQLKFSFLDSQVTEVLEQENQSSQGENVKNHKAENAVTGETHKLDQEKKKAAGQSVELTRKIDGDDSGLVAEKPLVIGPREQEGRQSTSNSGERVEFSTESTELRQKEKEKDKRSPVREVGNDTTEAIEEKQQTEKAEQVDVVVNSQAKAHLERLDELGIVLNPALVRLVKTTAAEIIEGAIAAYQRYRRDHYVKNPAGFFVYAVRNAVANNHTSEKANFFYWFEAMKKLGRLGYYEEVDGDYLVRDGIHLVSWQVLVERGWTCEYLQKRLRG
>NZ_CP016476.1|WP_065715555.1|141959_143480_+|gamma-glutamyltransferase
MTKVAIAADSKLAANIGAEIIAQGGNAIDAALAATLTSMCCELGVMAPGGSGFITIWPQDREPVVIDAYAAMPGKDFPGDRPYPELQKTLLNYGGGIYTGIGYGAVAVPGMFAGIAKASAEYGQLSWAELITPVAKVVEQGCPLSRVSGMYLEHAHAAIFGWHPESYQLVHPNGKDYLKAGDIVRLPDLAKTLYLIADEGPECLYQGTLAQELVAEMGRSHGAITQADLASYAAIIREPIRISYGDWEIVTNPAPAVGGACLAALLLLQQTRQNLDHDTIAAIQEAVLNYRFEHLNVDQDRWQAVTDLLYFARMNQLDHYRSSPSTIHVSTVDDQGCACSLTASAGYGSGAVIPGRNFWLNNSLGELELHREQSEPIAPGTRLISNMAPTIARHRNGSVLSIGSPGASRITTAIAQSLTNFIVHGDSLREAIRRPRLHVEEFDDQLMIAYEENLRAETLSNLSMPLRGFPPLSMYFGGVQAALWSEEEQQLQAIADPRREGSVAFA
>NZ_CP016476.1|WP_065715556.1|143514_143937_-|biopolymer-transporter-ExbD
MRIPQEEQRSAGINIVPMIDIIFSILAYFIISTLYLTKSKGLPVNLPGANTAQQQPSTEITVTIDAAGDIFLNEALIEIATLRASIRNLMAETPETLIIINADKAVSHGAVVEVMDEVRQIEGARLAIAAQKETTPVSTD
>NZ_CP016476.1|WP_065715557.1|144143_144791_-|MotA/TolQ/ExbB-proton-channel-family-protein
MNITNFFAAGGIVAYPLLIFSLAGVACIIERSVFWWRINRRQRQVVRDALGLYRQDPFNAMKFLKRNADLPIARIFLEALDLENPNSEEFRLALESATQAEIPTLKRFNTVFDTIIAVSPLLGLLGTILGLMQSFSALNIGDVGNTNAAGVTGGISEALVSTVMGLVVAIFTLLFANLFNGLYQRNLAFIQEYGGQLELLYRRFYEKSEAAIMNR
>NZ_CP016476.1|WP_065715558.1|145506_146106_+|exopolysaccharide-biosynthesis-protein
MKKLSEKLHHYFFEEERPERVSLANVFALTEERLFGFPLALIAFLSIFAIPGTSFIFGIAMLSITLQLCLGQSKPWVPQKVLKTSFPLPQIQRFMGYLIPWLKRIEKITKPRLTPICHSLPGRIILGIILSAMALLVILPIPGANTVPAIAIFFSALGLQENDGVLSLLGVAIALVFIGILISLIWTGSNVFQFIHQYF
>NZ_CP016476.1|WP_065715559.1|146146_149089_-|cation-transporting-P-type-ATPase
MEPNHIWTFVPEDVYAVLESQPDGLSAQAAQQRLEKFGPNALPQPPQRPLWLKFLDQVTHFMALLLWVAGILAFVSGTPELGWAIWTVIWVNGIFSFWQEFQAEKSLAALKKVLPAQVKVYRDGALQSIPAVELVPGDVMQLEEGDRLSADARLVSSESLYLDLSVMTGESLPVARNAYPVRVRETASVRGGQPLRQGEQPTQEKTNPAEIANLLLAGSTVSSGRGVAVVYGTGAQTEFGHVAHLTTNVKREPSSLEVQVGKIVRIITAIALTMGVIVFLLTEFLVGMKLRESFVFAIGIIVALVPEGLLPTVTLALAMGVRRMVRKNALVRRLSAVETLSATTVICTDKTGTLTKNEMTVHYLWLPWLTEAELPVQPPLQTPNHGQPGEIQPFLIEVTGAGYDPGSGTVNLAADFTARWKIDLLLTGAALCSNAQLVHLDTPSRWQEIGDPTEAALIVVATKAGLNLQHLQQQYPRLREIPFDSRRRLMTVVLDWQESDIWQSELPCMAFTKGAPLEVLRHCQAVLRNGSIQTLGHEQWEEVVQANDRLAAQGFRVLGVAARRGQRDLVDLRAQELEQDLIFIGLIAMFDPPRPEVKQAIAQCHTAGIKVTMVTGDYGLTAQAIAQQIGIVNQQVRVVTGEGMGHLSDAQLRQILKYRSGLVFARMSPEQKLRLVQAYKDIGEVVAVTGDGVNDAPALRAAHIGIAMGLNGTDVAREAADIVLTDDNFATIISAVEQGRTVYQNIRKFITYILASNVAEVVPFLLMVALKIPPALVIMQILAVDLGTDMIPALALGTEAAEVGIMTQAPRKKSQNLLGRSLLIRAYCFLGLIEATLGMVGFFIVWWSYGYGLADLQAITPDLLHHGADAATTAIYAQATTMTLAVIVACQDGNVFACRSENVSIFRLGFFSNPLIWVGIATEWMLVIAITKSAFFQNIFQTAPLAPWQWLLLIICPPLILGIDELRKGFFAPKDKHFPS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP016476_1	1.1\|133137\|37\|NZ_CP016476\|CRISPRCasFinder,CRT	133137-133173	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133137-133173	1.0
NZ_CP016476_1	1.2\|133210\|41\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133210-133250	41	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133210-133250	1.0
NZ_CP016476_1	1.3\|133287\|40\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133287-133326	40	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133287-133326	1.0
NZ_CP016476_1	1.4\|133363\|37\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133363-133399	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133363-133399	1.0
NZ_CP016476_1	1.5\|133436\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133436-133471	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133436-133471	1.0
NZ_CP016476_1	1.6\|133508\|35\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133508-133542	35	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133508-133542	1.0
NZ_CP016476_1	1.7\|133579\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133579-133616	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133579-133616	1.0
NZ_CP016476_1	1.8\|133653\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133653-133690	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133653-133690	1.0
NZ_CP016476_1	1.9\|133727\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133727-133762	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133727-133762	1.0
NZ_CP016476_1	1.10\|133799\|40\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133799-133838	40	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133799-133838	1.0
NZ_CP016476_1	1.11\|133875\|41\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133875-133915	41	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133875-133915	1.0
NZ_CP016476_1	1.12\|133952\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	133952-133987	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	133952-133987	1.0
NZ_CP016476_1	1.13\|134024\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134024-134062	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134024-134062	1.0
NZ_CP016476_1	1.14\|134099\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134099-134134	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134099-134134	1.0
NZ_CP016476_1	1.15\|134171\|41\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134171-134211	41	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134171-134211	1.0
NZ_CP016476_1	1.16\|134248\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134248-134286	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134248-134286	1.0
NZ_CP016476_1	1.17\|134323\|37\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134323-134359	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134323-134359	1.0
NZ_CP016476_1	1.18\|134396\|37\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134396-134432	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134396-134432	1.0
NZ_CP016476_1	1.19\|134469\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134469-134504	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134469-134504	1.0
NZ_CP016476_1	1.20\|134541\|41\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134541-134581	41	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134541-134581	1.0
NZ_CP016476_1	1.21\|134618\|37\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134618-134654	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134618-134654	1.0
NZ_CP016476_1	1.22\|134691\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134691-134728	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134691-134728	1.0
NZ_CP016476_1	1.23\|134765\|41\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134765-134805	41	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134765-134805	1.0
NZ_CP016476_1	1.24\|134842\|37\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134842-134878	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134842-134878	1.0
NZ_CP016476_1	1.25\|134915\|40\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134915-134954	40	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134915-134954	1.0
NZ_CP016476_1	1.26\|134991\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	134991-135028	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	134991-135028	1.0
NZ_CP016476_1	1.27\|135065\|34\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135065-135098	34	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135065-135098	1.0
NZ_CP016476_1	1.28\|135135\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135135-135172	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135135-135172	1.0
NZ_CP016476_1	1.29\|135209\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135209-135244	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135209-135244	1.0
NZ_CP016476_1	1.30\|135281\|41\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135281-135321	41	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135281-135321	1.0
NZ_CP016476_1	1.31\|135358\|49\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135358-135406	49	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135358-135406	1.0
NZ_CP016476_1	1.32\|135443\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135443-135480	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135443-135480	1.0
NZ_CP016476_1	1.33\|135517\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135517-135552	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135517-135552	1.0
NZ_CP016476_1	1.34\|135589\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135589-135626	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135589-135626	1.0
NZ_CP016476_1	1.35\|135663\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135663-135701	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135663-135701	1.0
NZ_CP016476_1	1.36\|135738\|37\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135738-135774	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135738-135774	1.0
NZ_CP016476_1	1.37\|135811\|42\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135811-135852	42	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135811-135852	1.0
NZ_CP016476_1	1.38\|135889\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135889-135927	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135889-135927	1.0
NZ_CP016476_1	1.39\|135964\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	135964-136002	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	135964-136002	1.0
NZ_CP016476_1	1.40\|136039\|44\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136039-136082	44	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136039-136082	1.0
NZ_CP016476_1	1.41\|136119\|40\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136119-136158	40	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136119-136158	1.0
NZ_CP016476_1	1.42\|136195\|37\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136195-136231	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136195-136231	1.0
NZ_CP016476_1	1.43\|136268\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136268-136305	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136268-136305	1.0
NZ_CP016476_1	1.44\|136342\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136342-136380	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136342-136380	1.0
NZ_CP016476_1	1.45\|136417\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136417-136452	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136417-136452	1.0
NZ_CP016476_1	1.46\|136489\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136489-136527	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136489-136527	1.0
NZ_CP016476_1	1.47\|136564\|43\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136564-136606	43	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136564-136606	1.0
NZ_CP016476_1	1.48\|136643\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136643-136681	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136643-136681	1.0
NZ_CP016476_1	1.49\|136718\|39\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136718-136756	39	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136718-136756	1.0
NZ_CP016476_1	1.50\|136793\|36\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136793-136828	36	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136793-136828	1.0
NZ_CP016476_1	1.51\|136865\|38\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136865-136902	38	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136865-136902	1.0
NZ_CP016476_1	1.52\|136939\|37\|NZ_CP016476\|CRISPRCasFinder,CRT,PILER-CR	136939-136975	37	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	136939-136975	1.0

1. spacer 1.1|133137|37|NZ_CP016476|CRISPRCasFinder,CRT matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

acccctcccaccagggcgagattggattgttcaccat	CRISPR spacer
acccctcccaccagggcgagattggattgttcaccat	Protospacer
*************************************

2. spacer 1.2|133210|41|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcaaccaagtaagacctaatctgattcccgcttcct	CRISPR spacer
ttgaagcaaccaagtaagacctaatctgattcccgcttcct	Protospacer
*****************************************

3. spacer 1.3|133287|40|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgttggcattcgctgctaccgtcaatgtgacgtaaaagcg	CRISPR spacer
tgttggcattcgctgctaccgtcaatgtgacgtaaaagcg	Protospacer
****************************************

4. spacer 1.4|133363|37|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcctgggtgtcgctgatcgagaaccggaacctcctg	CRISPR spacer
ctcctgggtgtcgctgatcgagaaccggaacctcctg	Protospacer
*************************************

5. spacer 1.5|133436|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttaaccatgtttaacttcaaaaatctcttttc	CRISPR spacer
aattttaaccatgtttaacttcaaaaatctcttttc	Protospacer
************************************

6. spacer 1.6|133508|35|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aaacctagattagtccgtcaatctgtcggtgcagc	CRISPR spacer
aaacctagattagtccgtcaatctgtcggtgcagc	Protospacer
***********************************

7. spacer 1.7|133579|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cactttacatggtccgccgtgacatttttcatctttgg	CRISPR spacer
cactttacatggtccgccgtgacatttttcatctttgg	Protospacer
**************************************

8. spacer 1.8|133653|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

atgaccgtttacaaaccaattgaacttggaggttcaaa	CRISPR spacer
atgaccgtttacaaaccaattgaacttggaggttcaaa	Protospacer
**************************************

9. spacer 1.9|133727|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cttcaataacgaagttgatgagatcatcattgaggg	CRISPR spacer
cttcaataacgaagttgatgagatcatcattgaggg	Protospacer
************************************

10. spacer 1.10|133799|40|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

atcgacattgctatatttcccgcctactgactgggatggt	CRISPR spacer
atcgacattgctatatttcccgcctactgactgggatggt	Protospacer
****************************************

11. spacer 1.11|133875|41|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agaaaaagaaatggaaatggagaaagggctgcaagggcgta	CRISPR spacer
agaaaaagaaatggaaatggagaaagggctgcaagggcgta	Protospacer
*****************************************

12. spacer 1.12|133952|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtaacacactacaaacaaacaaggaattaaaacaat	CRISPR spacer
gtaacacactacaaacaaacaaggaattaaaacaat	Protospacer
************************************

13. spacer 1.13|134024|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aaccatgaggatgtgaactctgcccatttcgaccaccac	CRISPR spacer
aaccatgaggatgtgaactctgcccatttcgaccaccac	Protospacer
***************************************

14. spacer 1.14|134099|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cttttggagtcgctgcggaactttaccagacattag	CRISPR spacer
cttttggagtcgctgcggaactttaccagacattag	Protospacer
************************************

15. spacer 1.15|134171|41|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

atttagaaagtgatcaaatgttccaaatgctgctcatcaaa	CRISPR spacer
atttagaaagtgatcaaatgttccaaatgctgctcatcaaa	Protospacer
*****************************************

16. spacer 1.16|134248|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attagcgtcaagacagttggagtttatgttgtcgttagc	CRISPR spacer
attagcgtcaagacagttggagtttatgttgtcgttagc	Protospacer
***************************************

17. spacer 1.17|134323|37|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgattatcgctgctatttacgacggcaagcgtaccga	CRISPR spacer
tgattatcgctgctatttacgacggcaagcgtaccga	Protospacer
*************************************

18. spacer 1.18|134396|37|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agaggggttaacctttaagactatcattgtcaacagc	CRISPR spacer
agaggggttaacctttaagactatcattgtcaacagc	Protospacer
*************************************

19. spacer 1.19|134469|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tctggtcataaaatctctctctatggggagaatcag	CRISPR spacer
tctggtcataaaatctctctctatggggagaatcag	Protospacer
************************************

20. spacer 1.20|134541|41|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttggagggcttattaattaaccgtctcgaagaggtacatca	CRISPR spacer
ttggagggcttattaattaaccgtctcgaagaggtacatca	Protospacer
*****************************************

21. spacer 1.21|134618|37|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aaggttcacaaggcttcattccacaaacacttgtgga	CRISPR spacer
aaggttcacaaggcttcattccacaaacacttgtgga	Protospacer
*************************************

22. spacer 1.22|134691|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cacgaagctgctgctcctgacggacaaggtcaaggagg	CRISPR spacer
cacgaagctgctgctcctgacggacaaggtcaaggagg	Protospacer
**************************************

23. spacer 1.23|134765|41|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gaggtgtcttatgaagccagttggaaagaagaagagagcga	CRISPR spacer
gaggtgtcttatgaagccagttggaaagaagaagagagcga	Protospacer
*****************************************

24. spacer 1.24|134842|37|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agatgatggaggacatcatgactaaagcggctgaaca	CRISPR spacer
agatgatggaggacatcatgactaaagcggctgaaca	Protospacer
*************************************

25. spacer 1.25|134915|40|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agaagcagggtcgtaccatccgctccgaagcggcaaaagc	CRISPR spacer
agaagcagggtcgtaccatccgctccgaagcggcaaaagc	Protospacer
****************************************

26. spacer 1.26|134991|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tcaaaccagaggggatgtttgatgtcacggtgcaattt	CRISPR spacer
tcaaaccagaggggatgtttgatgtcacggtgcaattt	Protospacer
**************************************

27. spacer 1.27|135065|34|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgaccggagtatatgtaccctcccttctcttca	CRISPR spacer
gtgaccggagtatatgtaccctcccttctcttca	Protospacer
**********************************

28. spacer 1.28|135135|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgatgctttcctgcagttactgctggtcttacgcact	CRISPR spacer
ctgatgctttcctgcagttactgctggtcttacgcact	Protospacer
**************************************

29. spacer 1.29|135209|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtcgaactgatccaacttcttcagcacaatagagtg	CRISPR spacer
gtcgaactgatccaacttcttcagcacaatagagtg	Protospacer
************************************

30. spacer 1.30|135281|41|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cctctttctgtagcttcactaacaaactgggttgaacacca	CRISPR spacer
cctctttctgtagcttcactaacaaactgggttgaacacca	Protospacer
*****************************************

31. spacer 1.31|135358|49|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tcgctatgactgggccatgggaatgctcaatattgccatggacaccctg	CRISPR spacer
tcgctatgactgggccatgggaatgctcaatattgccatggacaccctg	Protospacer
*************************************************

32. spacer 1.32|135443|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcaagacaccttggagtgctggaagtggttgcgtaaca	CRISPR spacer
gcaagacaccttggagtgctggaagtggttgcgtaaca	Protospacer
**************************************

33. spacer 1.33|135517|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

taatcgacctttaaagatgtcatacagcttagacca	CRISPR spacer
taatcgacctttaaagatgtcatacagcttagacca	Protospacer
************************************

34. spacer 1.34|135589|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tttggaggggaaacctcgagtacgggatctcttccaat	CRISPR spacer
tttggaggggaaacctcgagtacgggatctcttccaat	Protospacer
**************************************

35. spacer 1.35|135663|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaaacaagattagcggtactcctacaaaaagggctgt	CRISPR spacer
tgtaaacaagattagcggtactcctacaaaaagggctgt	Protospacer
***************************************

36. spacer 1.36|135738|37|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtcaacgccaaagctcgcaagcaatggcgcaagggc	CRISPR spacer
cgtcaacgccaaagctcgcaagcaatggcgcaagggc	Protospacer
*************************************

37. spacer 1.37|135811|42|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

caacttgccagattgagatttgagagcctgtgcttcctccag	CRISPR spacer
caacttgccagattgagatttgagagcctgtgcttcctccag	Protospacer
******************************************

38. spacer 1.38|135889|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gccttcacaatatagggcgacttgccgaagaagagtatg	CRISPR spacer
gccttcacaatatagggcgacttgccgaagaagagtatg	Protospacer
***************************************

39. spacer 1.39|135964|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gaaggactttgacaaaacccttcgtactgatgaagggtt	CRISPR spacer
gaaggactttgacaaaacccttcgtactgatgaagggtt	Protospacer
***************************************

40. spacer 1.40|136039|44|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tcaaggagttagccgtttcccggaaacgggtgcaggatgctatg	CRISPR spacer
tcaaggagttagccgtttcccggaaacgggtgcaggatgctatg	Protospacer
********************************************

41. spacer 1.41|136119|40|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

atgagatctttaagcgataattgaagaaggctgtgtcagc	CRISPR spacer
atgagatctttaagcgataattgaagaaggctgtgtcagc	Protospacer
****************************************

42. spacer 1.42|136195|37|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gagatgttagaagcagcaaccgaggacatggagtctg	CRISPR spacer
gagatgttagaagcagcaaccgaggacatggagtctg	Protospacer
*************************************

43. spacer 1.43|136268|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tcggtgagtgtagcgttcaaaagattcagtgtggggat	CRISPR spacer
tcggtgagtgtagcgttcaaaagattcagtgtggggat	Protospacer
**************************************

44. spacer 1.44|136342|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ggccgctaagaacgcatctgagcttaaaaccttggaaaa	CRISPR spacer
ggccgctaagaacgcatctgagcttaaaaccttggaaaa	Protospacer
***************************************

45. spacer 1.45|136417|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aagttgcgcgacaaccccaacgtcattgcctatatc	CRISPR spacer
aagttgcgcgacaaccccaacgtcattgcctatatc	Protospacer
************************************

46. spacer 1.46|136489|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcctgggtattttgtcatgactgtttaccaagatgcaat	CRISPR spacer
gcctgggtattttgtcatgactgtttaccaagatgcaat	Protospacer
***************************************

47. spacer 1.47|136564|43|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaagctgcttgctctggcaaccaagtgggctaagtcccacaa	CRISPR spacer
ctaagctgcttgctctggcaaccaagtgggctaagtcccacaa	Protospacer
*******************************************

48. spacer 1.48|136643|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gggggaatcaggttatttacgacggcgtttcttcatggt	CRISPR spacer
gggggaatcaggttatttacgacggcgtttcttcatggt	Protospacer
***************************************

49. spacer 1.49|136718|39|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtctacgatgacccggaagaccctatcgaggaggatg	CRISPR spacer
ttgtctacgatgacccggaagaccctatcgaggaggatg	Protospacer
***************************************

50. spacer 1.50|136793|36|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttatagtgggtttaataatatgttcggtttta	CRISPR spacer
ttgtttatagtgggtttaataatatgttcggtttta	Protospacer
************************************

51. spacer 1.51|136865|38|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttttaggagcatcgctaatttgtatactttaa	CRISPR spacer
ccctttttttaggagcatcgctaatttgtatactttaa	Protospacer
**************************************

52. spacer 1.52|136939|37|NZ_CP016476|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

acctcatggaacagactgaggatatggagtccgtcag	CRISPR spacer
acctcatggaacagactgaggatatggagtccgtcag	Protospacer
*************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage