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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP014672 Thermoclostridium stercorarium subsp. thermolacticum DSM 2910 chromosome, complete genome 13 crisprs cas10,csm3gr7,csx10gr5,csm2gr11,csx1,csa3,cas3,DinG,cas2,cas1,cas4,cas5,cas7,cas8b2,cas6 1 21 4 1

Results visualization

1. NZ_CP014672
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_1 205058-206599 Orphan NA
23 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_2 781568-782700 Orphan NA
17 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_3 782844-783003 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_4 785865-786413 Orphan NA
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_5 1522835-1522928 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_6 1526875-1527496 Orphan I-A
9 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_7 1530277-1532206 Orphan I-A
29 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_8 1533576-1535710 Orphan I-A
32 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_9 1841998-1842487 Unclear NA
7 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_10 1846569-1851579 Unclear NA
76 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_11 2130830-2131091 Unclear NA
3 spacers
cas5,cas7,cas6,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_12 2382850-2383012 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014672_13 2383337-2384609 Orphan NA
19 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP014672_1 1.15|206009|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 206009-206043 35 NZ_CP014672.1 245652-245686 1 0.971

1. spacer 1.15|206009|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to position: 245652-245686, mismatch: 1, identity: 0.971

acgggcacgactcgacagagatcatgcagaatttg	CRISPR spacer
acgggcacgactcgacagagatcgtgcagaatttg	Protospacer
***********************.***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP014672_7 7.3|1530437|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530437-1530470 34 NZ_CP021438 Bacillus thuringiensis strain C15 plasmid pBMB172, complete sequence 111161-111194 5 0.853
NZ_CP014672_10 10.59|1850394|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850394-1850428 35 AY766464 Lactococcus phage TP712, complete sequence 20746-20780 6 0.829
NZ_CP014672_10 10.4|1846794|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1846794-1846827 34 MT074464 Salmonella phage bobsandoy, complete genome 36536-36569 7 0.794
NZ_CP014672_10 10.26|1848235|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1848235-1848268 34 MT074464 Salmonella phage bobsandoy, complete genome 36536-36569 7 0.794
NZ_CP014672_13 13.10|2383954|35|NZ_CP014672|CRISPRCasFinder,CRT,PILER-CR 2383954-2383988 35 NZ_CP015231 Epibacterium mobile F1926 plasmid unnamed1, complete sequence 424805-424839 7 0.8
NZ_CP014672_1 1.1|205088|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 205088-205123 36 NZ_CP032156 Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence 28318-28353 8 0.778
NZ_CP014672_7 7.23|1531748|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1531748-1531782 35 MK448511 Streptococcus satellite phage Javan473, complete genome 10757-10791 8 0.771
NZ_CP014672_10 10.42|1849281|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1849281-1849314 34 MN582082 Podoviridae sp. ctrTa16, complete genome 51852-51885 8 0.765
NZ_CP014672_10 10.4|1846794|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1846794-1846827 34 NZ_CP010073 Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj1, complete sequence 47624-47657 9 0.735
NZ_CP014672_10 10.4|1846794|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1846794-1846827 34 CP002030 Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence 13593-13626 9 0.735
NZ_CP014672_10 10.26|1848235|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1848235-1848268 34 NZ_CP010073 Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj1, complete sequence 47624-47657 9 0.735
NZ_CP014672_10 10.26|1848235|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1848235-1848268 34 CP002030 Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence 13593-13626 9 0.735
NZ_CP014672_10 10.40|1849151|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1849151-1849185 35 AP013771 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C37-MedDCM-OCT-S46-C116, *** SEQUENCING IN PROGRESS *** 14008-14042 9 0.743
NZ_CP014672_10 10.53|1850001|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850001-1850034 34 HQ634156 Vibrio phage PWH3a-P1 genomic sequence 53716-53749 9 0.735
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_CP013995 Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence 57442-57477 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_CP027518 Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence 173470-173505 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135334 Enterococcus faecium isolate E7471 plasmid 4 39230-39265 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135340 Enterococcus faecium isolate E7356 plasmid 2 172899-172934 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135279 Enterococcus faecium isolate E6975 plasmid 2 21791-21826 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135783 Enterococcus faecium isolate E4239 plasmid 2 52333-52368 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135294 Enterococcus faecium isolate E7237 plasmid 2 89882-89917 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135198 Enterococcus faecium isolate E6055 plasmid 2 57533-57568 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NC_021995 Enterococcus faecium Aus0085 plasmid p2, complete sequence 52632-52667 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135429 Enterococcus faecium isolate E8927 plasmid 2 50237-50272 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135436 Enterococcus faecium isolate E8691 plasmid 2 54278-54313 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135476 Enterococcus faecium isolate E8423 plasmid 2 174347-174382 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135175 Enterococcus faecium isolate E4402 plasmid 2 49690-49725 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135358 Enterococcus faecium isolate E7948 plasmid 2 192625-192660 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_AP019395 Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence 48133-48168 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_CP040741 Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence 187621-187656 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_CP035655 Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence 54192-54227 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_CP035649 Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence 54193-54228 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135171 Enterococcus faecium isolate E4227 plasmid 2 52333-52368 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LR135193 Enterococcus faecium isolate E4438 plasmid 3 54283-54318 9 0.75
NZ_CP014672_10 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1850065-1850100 36 NZ_LT598666 Enterococcus faecium isolate Ef_aus00233 plasmid 4 52640-52675 9 0.75
NZ_CP014672_6 6.9|1527430|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1527430-1527466 37 NZ_CP006906 Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence 81514-81550 10 0.73
NZ_CP014672_6 6.9|1527430|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1527430-1527466 37 MN694503 Marine virus AFVG_250M970, complete genome 2656-2692 10 0.73
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP030766 Escherichia coli strain 2017C-4109 plasmid pMCR-1, complete sequence 24527-24562 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP039587 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014859 plasmid p11-0225.2, complete sequence 36869-36904 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NC_019115 Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH146_65, complete sequence 12375-12410 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_KY624633 Citrobacter braakii strain CA-26 plasmid pCA-26, complete sequence 55784-55819 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_KU870627 Escherichia coli strain VT55363 plasmid pVT553, complete sequence 56240-56275 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP043182 Escherichia coli O2:H6 strain PG20180057 plasmid pPG20180057.1-IncI2, complete sequence 58525-58560 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP043202 Escherichia coli O16:H48 strain PG20180059 plasmid pPG20180059.1-IncI2, complete sequence 58525-58560 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP043194 Escherichia coli O16:H48 strain PG20180063 plasmid pPG20180063.1-IncI2, complete sequence 58525-58560 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP028601 Escherichia coli strain 147 plasmid pTA147-2, complete sequence 53999-54034 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP016547 Escherichia coli strain O177:H21 plasmid unnamed1, complete sequence 34883-34918 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP043196 Escherichia coli O16:H48 strain PG20180062 plasmid pPG20180062.1-IncI2, complete sequence 24392-24427 10 0.722
NZ_CP014672_7 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1530896-1530931 36 NZ_CP043204 Escherichia coli O16:H48 strain PG20180058 plasmid pPG20180058.1-IncI2, complete sequence 57943-57978 10 0.722
NZ_CP014672_7 7.13|1531094|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1531094-1531127 34 MN657041 Psychrobacter sp. strain ANT_P17 plasmid pA17P4, complete sequence 15377-15410 10 0.706
NZ_CP014672_7 7.13|1531094|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1531094-1531127 34 NZ_CP012534 Psychrobacter sp. P11G5 plasmid pPspP11G5a, complete sequence 14587-14620 10 0.706
NZ_CP014672_8 8.1|1533606|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1533606-1533640 35 MN694632 Marine virus AFVG_250M389, complete genome 51455-51489 10 0.714
NZ_CP014672_10 10.2|1846665|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1846665-1846698 34 KX712238 Mycobacterium phage Zephyr, complete genome 29726-29759 10 0.706
NZ_CP014672_10 10.2|1846665|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1846665-1846698 34 MK359331 Mycobacterium phage Rajelicia, complete genome 29393-29426 10 0.706
NZ_CP014672_10 10.2|1846665|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1846665-1846698 34 MH744414 Mycobacterium phage Arcanine, complete genome 28730-28763 10 0.706
NZ_CP014672_10 10.35|1848823|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1848823-1848859 37 NC_021067 Vibrio phage helene 12B3 genomic sequence 2678-2714 10 0.73
NZ_CP014672_10 10.35|1848823|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1848823-1848859 37 HQ634195 Vibrio phage eugene 12A10 genomic sequence 18362-18398 10 0.73
NZ_CP014672_2 2.16|782571|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 782571-782605 35 NZ_CP035514 Haematobacter massiliensis strain OT1 plasmid pOT1-4, complete sequence 51311-51345 11 0.686
NZ_CP014672_7 7.27|1532009|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1532009-1532045 37 MG592538 Vibrio phage 1.171.O._10N.261.52.F12, partial genome 52272-52308 11 0.703
NZ_CP014672_10 10.37|1848956|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1848956-1848989 34 NZ_CP024895 Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence 260411-260444 11 0.676
NZ_CP014672_10 10.6|1846922|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT 1846922-1846956 35 NZ_CP015253 Bacillus thuringiensis Bt18247 plasmid p113275, complete sequence 31353-31387 12 0.657

1. spacer 7.3|1530437|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021438 (Bacillus thuringiensis strain C15 plasmid pBMB172, complete sequence) position: , mismatch: 5, identity: 0.853

ctgcaaaacctgtacgaatttcttgttcatcgaa	CRISPR spacer
ctatataagctgtatgaatttcttgttcatcgaa	Protospacer
**..* ** *****.*******************

2. spacer 10.59|1850394|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to AY766464 (Lactococcus phage TP712, complete sequence) position: , mismatch: 6, identity: 0.829

gtttatatgatgtctgcattatattttcttcattt	CRISPR spacer
gtttaaatgatgtctgcattatcttttcttttgct	Protospacer
***** **************** *******.  .*

3. spacer 10.4|1846794|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MT074464 (Salmonella phage bobsandoy, complete genome) position: , mismatch: 7, identity: 0.794

ttactgagttaaagcataaaaacataaaaaaaag	CRISPR spacer
ttaatattttaaataataaaaacataaaaaaaaa	Protospacer
*** *.  *****  ******************.

4. spacer 10.26|1848235|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MT074464 (Salmonella phage bobsandoy, complete genome) position: , mismatch: 7, identity: 0.794

ttactgagttaaagcataaaaacataaaaaaaag	CRISPR spacer
ttaatattttaaataataaaaacataaaaaaaaa	Protospacer
*** *.  *****  ******************.

5. spacer 13.10|2383954|35|NZ_CP014672|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.8

tgtcaatacagaagtgctttttaaaccaccacagg-	CRISPR spacer
cgtcaagccagaagtgctttttaaacc-cgacttgt	Protospacer
.*****  ******************* * **  * 

6. spacer 1.1|205088|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 8, identity: 0.778

ttatccccggggacaacctgaccgcccggcccttgc	CRISPR spacer
ctatccccggtgacaacctgaccacccggcagcgac	Protospacer
.********* ************.******  . .*

7. spacer 7.23|1531748|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MK448511 (Streptococcus satellite phage Javan473, complete genome) position: , mismatch: 8, identity: 0.771

cgcaac--gctattgacaatactattaagccaattac	CRISPR spacer
--gaactatctattgaaaatactattaaaccaatgaa	Protospacer
   ***   ******* ***********.***** * 

8. spacer 10.42|1849281|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MN582082 (Podoviridae sp. ctrTa16, complete genome) position: , mismatch: 8, identity: 0.765

tgattttatatggaaaaagatacgacaacctaaa	CRISPR spacer
agcctgtgaatggaagaagatacgacaacgtaaa	Protospacer
 * .* *. ******.************* ****

9. spacer 10.4|1846794|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010073 (Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj1, complete sequence) position: , mismatch: 9, identity: 0.735

ttactgagttaaagcataaaaacataaaaaaaag	CRISPR spacer
ttttataattaaagcataataaaataaaaaaatc	Protospacer
** .  *.*********** ** *********  

10. spacer 10.4|1846794|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to CP002030 (Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence) position: , mismatch: 9, identity: 0.735

ttactgagttaaagcataaaaacataaaaaaaag	CRISPR spacer
ttctgaaattaaagcataataaaataaaaaaata	Protospacer
** . .*.*********** ** ********* .

11. spacer 10.26|1848235|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010073 (Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj1, complete sequence) position: , mismatch: 9, identity: 0.735

ttactgagttaaagcataaaaacataaaaaaaag	CRISPR spacer
ttttataattaaagcataataaaataaaaaaatc	Protospacer
** .  *.*********** ** *********  

12. spacer 10.26|1848235|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to CP002030 (Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence) position: , mismatch: 9, identity: 0.735

ttactgagttaaagcataaaaacataaaaaaaag	CRISPR spacer
ttctgaaattaaagcataataaaataaaaaaata	Protospacer
** . .*.*********** ** ********* .

13. spacer 10.40|1849151|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to AP013771 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C37-MedDCM-OCT-S46-C116, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.743

ttactattgtttctttaagtatgtttgacttcatt	CRISPR spacer
aaactattgtttatttaactatgtttgcagtaatg	Protospacer
  ********** ***** ********   * ** 

14. spacer 10.53|1850001|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to HQ634156 (Vibrio phage PWH3a-P1 genomic sequence) position: , mismatch: 9, identity: 0.735

gattgtaaaacgtatgaggtagtttatcaggttg	CRISPR spacer
gattgtaaaatgtaggaggtagtttggaaaatat	Protospacer
**********.*** **********.  *..*  

15. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

16. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

17. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135334 (Enterococcus faecium isolate E7471 plasmid 4) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

18. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135340 (Enterococcus faecium isolate E7356 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

19. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135279 (Enterococcus faecium isolate E6975 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

20. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135783 (Enterococcus faecium isolate E4239 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

21. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

22. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

23. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NC_021995 (Enterococcus faecium Aus0085 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

24. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135429 (Enterococcus faecium isolate E8927 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

25. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135436 (Enterococcus faecium isolate E8691 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

26. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

27. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135175 (Enterococcus faecium isolate E4402 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

28. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

29. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019395 (Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

30. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040741 (Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

31. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

32. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

33. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135171 (Enterococcus faecium isolate E4227 plasmid 2) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

34. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135193 (Enterococcus faecium isolate E4438 plasmid 3) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

35. spacer 10.54|1850065|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT598666 (Enterococcus faecium isolate Ef_aus00233 plasmid 4) position: , mismatch: 9, identity: 0.75

aattaactcacaaattaacataataaaacctcctta	CRISPR spacer
ttctatgctaccaattaacatcataaaacctcctta	Protospacer
  .**  ..** ********* **************

36. spacer 6.9|1527430|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006906 (Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence) position: , mismatch: 10, identity: 0.73

gctgaatgttatgatgaaagaccatttaaagattttc	CRISPR spacer
agaggttattatgatgaaagaggatttaaagatttag	Protospacer
.  *. *.*************  ************  

37. spacer 6.9|1527430|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MN694503 (Marine virus AFVG_250M970, complete genome) position: , mismatch: 10, identity: 0.73

gctgaatgttatgatgaaagaccatttaaagattttc	CRISPR spacer
ggagatcgttatgatgaaaaaccatttaaaaataaat	Protospacer
*  ** .************.**********.**   .

38. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030766 (Escherichia coli strain 2017C-4109 plasmid pMCR-1, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

39. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039587 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014859 plasmid p11-0225.2, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

40. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NC_019115 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH146_65, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

41. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY624633 (Citrobacter braakii strain CA-26 plasmid pCA-26, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

42. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU870627 (Escherichia coli strain VT55363 plasmid pVT553, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

43. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043182 (Escherichia coli O2:H6 strain PG20180057 plasmid pPG20180057.1-IncI2, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

44. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043202 (Escherichia coli O16:H48 strain PG20180059 plasmid pPG20180059.1-IncI2, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

45. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043194 (Escherichia coli O16:H48 strain PG20180063 plasmid pPG20180063.1-IncI2, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

46. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028601 (Escherichia coli strain 147 plasmid pTA147-2, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

47. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016547 (Escherichia coli strain O177:H21 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

48. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043196 (Escherichia coli O16:H48 strain PG20180062 plasmid pPG20180062.1-IncI2, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

49. spacer 7.10|1530896|36|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043204 (Escherichia coli O16:H48 strain PG20180058 plasmid pPG20180058.1-IncI2, complete sequence) position: , mismatch: 10, identity: 0.722

gattcataaaaacattactgaagtcagtgaaaatgt	CRISPR spacer
cgtcattaaaaccattactgaaatcagtgaaacctt	Protospacer
 .*.  ***** **********.********* . *

50. spacer 7.13|1531094|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MN657041 (Psychrobacter sp. strain ANT_P17 plasmid pA17P4, complete sequence) position: , mismatch: 10, identity: 0.706

gcatttattggtttgttagttatattgcgaatat	CRISPR spacer
ctcttttttggtttggtagttatattgtacatgc	Protospacer
 . *** ******** ***********.. **..

51. spacer 7.13|1531094|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012534 (Psychrobacter sp. P11G5 plasmid pPspP11G5a, complete sequence) position: , mismatch: 10, identity: 0.706

gcatttattggtttgttagttatattgcgaatat	CRISPR spacer
ctcttttttggtttggtagttatattgtacatgc	Protospacer
 . *** ******** ***********.. **..

52. spacer 8.1|1533606|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MN694632 (Marine virus AFVG_250M389, complete genome) position: , mismatch: 10, identity: 0.714

ttgatttcatatgttttatttgttagaatattaag	CRISPR spacer
caatctccccatgttttatttgttagcatataaag	Protospacer
. . .*.* .**************** **** ***

53. spacer 10.2|1846665|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to KX712238 (Mycobacterium phage Zephyr, complete genome) position: , mismatch: 10, identity: 0.706

tattgagggcggcggcagccctcgattttagttc	CRISPR spacer
tggtgagggcggccgcagccctcgacttcgcaat	Protospacer
*. ********** ***********.**..   .

54. spacer 10.2|1846665|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MK359331 (Mycobacterium phage Rajelicia, complete genome) position: , mismatch: 10, identity: 0.706

tattgagggcggcggcagccctcgattttagttc	CRISPR spacer
tggtgagggcggccgcagccctcgacttcgcaat	Protospacer
*. ********** ***********.**..   .

55. spacer 10.2|1846665|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MH744414 (Mycobacterium phage Arcanine, complete genome) position: , mismatch: 10, identity: 0.706

tattgagggcggcggcagccctcgattttagttc	CRISPR spacer
tggtgagggcggccgcagccctcgacttcgcaat	Protospacer
*. ********** ***********.**..   .

56. spacer 10.35|1848823|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NC_021067 (Vibrio phage helene 12B3 genomic sequence) position: , mismatch: 10, identity: 0.73

ttgctgttccctgaatacattgcaagaacgcttgttc	CRISPR spacer
ggactgttccctgaatacattgcactaactcattgcc	Protospacer
  .*********************  *** * *  .*

57. spacer 10.35|1848823|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to HQ634195 (Vibrio phage eugene 12A10 genomic sequence) position: , mismatch: 10, identity: 0.73

ttgctgttccctgaatacattgcaagaacgcttgttc	CRISPR spacer
ggactgttccctgaatacattgcactaactcattgcc	Protospacer
  .*********************  *** * *  .*

58. spacer 2.16|782571|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035514 (Haematobacter massiliensis strain OT1 plasmid pOT1-4, complete sequence) position: , mismatch: 11, identity: 0.686

atgatcgttgtggaaaacgaatacttcgtttccac	CRISPR spacer
gattccgttttggaaaacgaatactacgttaatag	Protospacer
.   .**** *************** ****  .* 

59. spacer 7.27|1532009|37|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to MG592538 (Vibrio phage 1.171.O._10N.261.52.F12, partial genome) position: , mismatch: 11, identity: 0.703

aaagaagtacggtaaaaggtatagattacaattacat	CRISPR spacer
cgtctagtacggtaaaagctagagattacaaggacgc	Protospacer
 .   ************* ** *********  **..

60. spacer 10.37|1848956|34|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024895 (Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

taacgacggtgagtggaatgtccgccttggatgc	CRISPR spacer
ccgcgacggcgagtggattgtccgcctcctgcgg	Protospacer
. .******.******* *********.  ..* 

61. spacer 10.6|1846922|35|NZ_CP014672|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015253 (Bacillus thuringiensis Bt18247 plasmid p113275, complete sequence) position: , mismatch: 12, identity: 0.657

ccggcgatgaagaggaaaaaataaagaatgataat	CRISPR spacer
aataaaatgaaaaggagaaaataaagaatgaattc	Protospacer
   . .*****.****.**************   .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 139699 : 247596 97 Bacillus_phage(11.11%) head,portal,plate,capsid,protease,transposase,integrase,tRNA,terminase attL 218820:218879|attR 251460:251532
DBSCAN-SWA_2 1277659 : 1289078 9 Bacillus_phage(42.86%) NA NA
DBSCAN-SWA_3 1507988 : 1605640 72 uncultured_virus(14.81%) tRNA,protease,transposase,portal NA
DBSCAN-SWA_4 2125118 : 2187824 55 Escherichia_phage(20.0%) protease,transposase,tRNA NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP014672.1|WP_083191793.1|196241_196427_-|hypothetical-protein 196241_196427_- 61 aa aa NA NA NA 139699-247596 yes