CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016441	Bordetella pseudohinzii strain HI4681 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP016440	Bordetella pseudohinzii strain HI4681 chromosome, complete genome	2 crisprs	DEDDh,DinG,csa3,PD-DExK,cas9,cas1,cas2	0	12	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016440_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016440_1

237183-237260

Orphan

Consensus_repeat	Method
GCCCACGGTGGCCTGGCGGCCGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016440_1

>merge|NZ_CP016440|1|237183-237260|CRISPRCasFinder
GCCCACGGTGGCCTGGCGGCCGAATTCCAGCGAACCCCAGGCGTCGTTGGCCAGGCCCACGGTGGCCTGGCGGCCGAA

>NZ_CP016440|1|1|237183-237260|CRISPRCasFinder
GCCCACGGTGGCCTGGCGGCCGAA	TTCCAGCGAACCCCAGGCGTCGTTGGCCAG
GCCCACGGTGGCCTGGCGGCCGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016440.1\|WP_043210392.1\|231814_232279_+\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|367134
NZ_CP016440.1\|WP_043211078.1\|242038_243010_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP016440.1\|WP_043210407.1\|226153_227038_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP016440.1\|WP_043211082.1\|237985_238651_+\|CsgG/HfaB-family-protein	unknown	unknown	gnl\|CDD\|224379
NZ_CP016440.1\|WP_043210400.1\|227519_227882_+\|sulfur-reduction-protein-DsrE	unknown	unknown	gnl\|CDD\|224955
NZ_CP016440.1\|WP_043210403.1\|227238_227478_+\|sulfurtransferase-TusA-family-protein	unknown	unknown	gnl\|CDD\|376492
NZ_CP016440.1\|WP_043210383.1\|239075_239732_+\|DUF799-domain-containing-protein	unknown	unknown	gnl\|CDD\|368539
NZ_CP016440.1\|WP_029577660.1\|244063_244384_-\|DUF4387-domain-containing-protein	unknown	unknown	gnl\|CDD\|379559
NZ_CP016440.1\|WP_043210388.1\|233847_235242_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|181288
NZ_CP016440.1\|WP_048026070.1\|235244_236192_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
NZ_CP016440.1\|WP_043210377.1\|243046_244009_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP016440.1\|WP_043210381.1\|239806_240667_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_CP016440.1\|WP_043210390.1\|232937_233834_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP016440.1\|WP_043210395.1\|231544_231808_+\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl\|CDD\|225795
NZ_CP016440.1\|WP_165590413.1\|245956_247072_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP016440.1\|WP_053073168.1\|232240_232888_-\|DUF1275-family-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP016440.1\|WP_043210372.1\|244395_245751_-\|acyclic-terpene-utilization-AtuA-family-protein	unknown	unknown	gnl\|CDD\|377804
NZ_CP016440.1\|WP_043210398.1\|229992_231489_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase	unknown	unknown	gnl\|CDD\|239427
NZ_CP016440.1\|WP_043210379.1\|240671_241913_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NZ_CP016440.1\|WP_082149556.1\|238629_239070_+\|DUF4810-domain-containing-protein	unknown	unknown	gnl\|CDD\|379760

Protein	Function_ID	Function_description	E-value
NZ_CP016440.1\|WP_043210392.1\|231814_232279_+\|YaiI/YqxD-family-protein	gnl\|CDD\|367134	pfam02639, DUF188, Uncharacterized BCR, YaiI/YqxD family COG1671.	1.17184e-67
NZ_CP016440.1\|WP_043211078.1\|242038_243010_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.35692e-109
NZ_CP016440.1\|WP_043210407.1\|226153_227038_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.50762e-25
NZ_CP016440.1\|WP_043211082.1\|237985_238651_+\|CsgG/HfaB-family-protein	gnl\|CDD\|224379	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane].	2.44912e-67
NZ_CP016440.1\|WP_043210400.1\|227519_227882_+\|sulfur-reduction-protein-DsrE	gnl\|CDD\|224955	COG2044, COG2044, Predicted peroxiredoxins [General function prediction only].	3.21619e-17
NZ_CP016440.1\|WP_043210403.1\|227238_227478_+\|sulfurtransferase-TusA-family-protein	gnl\|CDD\|376492	pfam01206, TusA, Sulfurtransferase TusA. This family includes the TusA sulfurtransferases.	8.94469e-12
NZ_CP016440.1\|WP_043210383.1\|239075_239732_+\|DUF799-domain-containing-protein	gnl\|CDD\|368539	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.	1.10872e-102
NZ_CP016440.1\|WP_029577660.1\|244063_244384_-\|DUF4387-domain-containing-protein	gnl\|CDD\|379559	pfam14330, DUF4387, Domain of unknown function (DUF4387). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are approximately 110 amino acids in length. There is a conserved RSKN sequence motif.	4.13962e-49
NZ_CP016440.1\|WP_043210388.1\|233847_235242_-\|amidohydrolase-family-protein	gnl\|CDD\|181288	PRK08204, PRK08204, hypothetical protein; Provisional.	4.56753e-166
NZ_CP016440.1\|WP_048026070.1\|235244_236192_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	3.12282e-96
NZ_CP016440.1\|WP_043210377.1\|243046_244009_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	1.3983e-111
NZ_CP016440.1\|WP_043210381.1\|239806_240667_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	2.01333e-150
NZ_CP016440.1\|WP_043210390.1\|232937_233834_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.32505e-64
NZ_CP016440.1\|WP_043210395.1\|231544_231808_+\|ribbon-helix-helix-protein,-CopG-family	gnl\|CDD\|225795	COG3256, NorB, Nitric oxide reductase large subunit [Inorganic ion transport and metabolism].	0.00355414
NZ_CP016440.1\|WP_165590413.1\|245956_247072_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.67535e-53
NZ_CP016440.1\|WP_053073168.1\|232240_232888_-\|DUF1275-family-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	2.67905e-09
NZ_CP016440.1\|WP_043210372.1\|244395_245751_-\|acyclic-terpene-utilization-AtuA-family-protein	gnl\|CDD\|377804	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA. This family consists of several bacterial and plant proteins of around 400 residues in length. One member of this family has been characterized in Pseudomonas citronellolis as AtuA, a member of a gene cluster that is essential for the acyclic terpene utilisation (Atu) pathway.	1.62092e-20
NZ_CP016440.1\|WP_043210398.1\|229992_231489_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase	gnl\|CDD\|239427	cd03311, CIMS_C_terminal_like, CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from both barrels contribute to the binding of the folate substrate.	8.38925e-77
NZ_CP016440.1\|WP_043210379.1\|240671_241913_-\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0
NZ_CP016440.1\|WP_082149556.1\|238629_239070_+\|DUF4810-domain-containing-protein	gnl\|CDD\|379760	pfam16068, DUF4810, Domain of unknown function (DUF4810). This family of proteins is found in bacteria. Proteins in this family are typically between 117 and 134 amino acids in length. There is a conserved PES sequence motif. It is a putative lipoprotein.	3.19631e-38

>NZ_CP016440.1|WP_048026070.1|235244_236192_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKIMIAAAGAVLLASAAQAQTYPARPVELTILWAAGTAPDVVGRALGEGMARELGQPVLIMNKPGAGGAVAYRYTANQKPDGYALIMNSNSISTAYHTGTLPFDYQSFTPVAQVSIESPVLVARADAPFDDLAGLIAQARRKPGELRVGNSGVGSHLQIASEAFFEQQKVEVNHIPFASAFSITSLLGGDIDASMTLPGSVAPQVAAGKVKVLGVLASRRDPSFPSVATAREQGYDFSADMWRGVAAPRGLPDAVRARIEQAVRATVQSEDFKKRGLANGFQPAFLPHEAFANVIAQEDQTIAAALQKQGLKKSP
>NZ_CP016440.1|WP_043210388.1|233847_235242_-|amidohydrolase-family-protein
MPQTLITRAHLLSLDPAIGDLPQADILIEADRIARIAPRIDAPHARRIDAAGRLVLPGLINAHIHTWETALRGIGGNWAGLDYFNYFHGRLAPLYTPEDTYLGTLAGAFSQMDAGVTTIFDWCHNNSTPEHTDAAIQALQASGIRAVFGHGTIKPKPRPGERHFSEIPHPVAEIRRLRLGALSDDQARVTLAMAILGPDYATLEVCRQDFRAALDFDLLSSAHAWGRPNRLVPGGYRQLAAEGLLAGRHNVVHANYFEDDEVRLLIDHGASITATPGVEMQFHARRPLSGRVRAAGGLPSIGVDSEVGNKGDMFDLMRTTLLVERMYANQDAFAALAGQASAGAAVGTGGSPIKTTAVRTREVLEWATRGNAAALGMAERIGSLAPGKQADLIMIERSRPHILSTQDPVQAVVSYAQPNDVSLVMIAGEVVKEDGVLRHAGRLDTTALQASAQRLMRESGVPIV
>NZ_CP016440.1|WP_043210390.1|232937_233834_+|LysR-family-transcriptional-regulator
MSFELADLRLIRLLVEAGSLSEAARRVDSSPAVMSRRLSALEARLALRLFHRSSRQFVLTQEGAMLHERALAVLESVAEIEAEIASVGEVPRGLLRVGAPMQIGRQRVAAIVADFTQQYPEVEVQLTLSDAGFNVHDDALDVAIRAGLPDGPDIVVRRLLRSRRLICATPGYLARHGTPRVPEDLLRHNCIRLIRRRGTFDPWLFRHANGEVRTVQVAGALTSASGEVMYDWIMQGRGIGQKALWDVEEDLRAGRLVECLADYACHDIALYATWRARPQLPLRLRRFVDSLALAFGAD
>NZ_CP016440.1|WP_053073168.1|232240_232888_-|DUF1275-family-protein
MPTPDPRPGPSAHFLIALAGATDAMMMLRGAPVFAVYVTGDTARIGVALGHGQLSLALLPIMAVILAFFAATTLAAGIGQAAPRSRGAVLLGLCAALLAGAAAVPGDAHRGFAQVLWVAAAMGVLNQVRGDEAGVTFITGTLVRTGRALASGDIWAAAQGLGRWCSFLAGVAACAWFDSRYTACTLPLIAAVAGLGAARLAWRSGPGLAARLPRQ
>NZ_CP016440.1|WP_043210392.1|231814_232279_+|YaiI/YqxD-family-protein
MHIWVDADASPAVIKDILYRAAQRWRLPLTLVANQMLRTPPSPWIRAVQVPRGFDVADAHIAQHAVAGDLVITGDIPLAADVLAKGAMAINPRGERYSPETIRERLAMRDMMEELRASGVDAGGPSAFSQADRKAFANQLDALLARQARGQPGP
>NZ_CP016440.1|WP_043210395.1|231544_231808_+|ribbon-helix-helix-protein,-CopG-family
MNKYDLEKNKALKLAGQLRQGGTPGRFGAGQAPDRREQRKLDQAAGLVPFALKLPQAQAERLRALAQERGVSTNDIVAELLQKALDA
>NZ_CP016440.1|WP_043210398.1|229992_231489_+|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase
MQALPRHEHSPDVSFDGGDLDCGNGLLLLIRKHIDPLPRGGLLEILSREISVDEDLPAWCRLTGNELVSWTQQDGQRSFLVCKGALAERQAPAAPAKAPRPAEPRQAPRQRIAAPPLPPLAVTGMGSWPRPRWMIEAMHAHVQGRLSEAAFQETADDAVRLAVAAQEQAGVDMITDGEQRRDSYASFVASRLDNCQLIPLTDLLPLVDDPEAFAAELRALDIPAGEVRHPAVFGRLARSRPLVAHEVDFARSVTGKPVKVALPGPYLLTRTMWMECISDRAYDNREALAADIVRVLRQELAELLDAGAALVQLDEPVLSEVVFSGAKNKRSFMCGALSESLAPAQELAFARDLLNAVLDGMPQERTALHVCRGNWTPDESVALSGDYAPLLPTLAQVRVGAYLLEMCTPRAGDVAMLKALPDHARIGIGVVNQKDPAIESEDAVAARIERGIGLFGRDRLLLHPDCGFATFADNPICSAGIAQQKLAVIAQAAGRFAR
>NZ_CP016440.1|WP_043210400.1|227519_227882_+|sulfur-reduction-protein-DsrE
MAGKFVVSLTCSKNDTDKATVAFVVANAAVASDKQTVVFLSIEGTRLSQQGYADDIHEAGFAPLKELMDNFAAAGGEIYVCSPCFKKRALDENKLVAGAKIVGGAKLVEFMSDGAPSISY
>NZ_CP016440.1|WP_043210403.1|227238_227478_+|sulfurtransferase-TusA-family-protein
MSAPREGDDFWDAGNMGCGELILKLRKHLKKMPGQLMRVVAHDAGAIHDIPAFCRMTRNELERYDAQTHTFWIRSRLDW
>NZ_CP016440.1|WP_043210407.1|226153_227038_+|GntR-family-transcriptional-regulator
MPRRSSSRLDLAGRICGYIHEQRLAPGDRVNEKRLAEWLGVSRTPVRAALEELAAHGYVERRSNLGMTLVKPPPLPAPGGARELDELVLRVARDRHKGVLAEFISESDLMQAYGLTRLRVREALERLANLGAVERKLASGWRFLAAPWDSEARRQSYQFRLTVEPAAMQLPGFALAPAWIDDMRRRHQRFLQSPWDEHASIEFFEMNAAFHLGIAAGSGNRHFADVIERQNMLRRLSNYDWRYGQDRVLVSTREHLEILDKLAAGDIELAVLLMRRHLESAMQVRSTPRQNCSL
>NZ_CP016440.1|WP_043211082.1|237985_238651_+|CsgG/HfaB-family-protein
MKAGTLIALAAALAGCATERSQAVAPPQTAAASKPAYQGPRSPISVGKFDNRSNYLRGVFSDGQDRLGGQAKTILVSHLQRTGRFSVMDRENLSEIAQEAAFNKKANQIKGARYVVTGDVTAFGRKVTGDNQLFGILGRGKEQVAYAKVDLNVVDVSSSEVVYSVTGAGEYALSNREVLGFGGAAGYDSTLNGKVLDLAIREAVDRLVDGVEQGAWRPSAN
>NZ_CP016440.1|WP_082149556.1|238629_239070_+|DUF4810-domain-containing-protein
MASVRQLRTAMTIPRLTRAGLACALALGLSACAQQKSLYSWQSYQPSVYAYLKDDGSDPTAQLAAMEKNVETARSAEQALPPGFRAHMALLYLKTGQDDKAVEQFNGEKNAFPESAPFMDFLMSKKDASVAGLAKSATDTNTAKGK
>NZ_CP016440.1|WP_043210383.1|239075_239732_+|DUF799-domain-containing-protein
MIRTLFRAGLLAALAVLTGCVAAPQRNVDYGAFRESKPASILVLPPLNESVEPVASAAVLAQATYPLAESGYYVVPVAVMDETFRQNGMISPEDANQVPPAKLREIFGADAALYLKVKQYGSSYQLLGSVTTVAVDASLVDLRTGAQLWEGTKTVVQAGNGSQGGILGMLVQAVVDQVVNTLTDRAYGVAALTNQQLLMAGTQGGLLYGPRSPHYEFK
>NZ_CP016440.1|WP_043210381.1|239806_240667_+|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MASSTQRNSPAPYGGAGPARKVTPRRLQEMRDAGEKIVMLTAYDAVFAGLAGQAGVDAVLVGDSLGMVCQGRDSTVPVTMDDMVYHTQSVARGLADSPSLLLSDLPFGSYHGGQDDAMRNAVRLMQAGAQMVKLEGGGWTAPLVRFLVERGVPVCAHLGLTPQTVHALSGYRVQGRDDDGAARLERHARELADAGATLLVLEMVPAALSARITAALPACHTIGIGAGAGTAGQVLVMHDMLGASLGKTPRFVKNFLAGSGGVREAFEAYARAVREGSFPDDALHAW
>NZ_CP016440.1|WP_043210379.1|240671_241913_-|Hsp70-family-protein
MTACGIDFGTSNSTVGWMRPGQHALLALEDGKPTLPSAIFFHDEDEEVSYGRAAIADYVAGYDGRLMRSMKSLLGSSLMEGHTEVAGRALPFRVLLTRFIAELKARAERAAGRGFEAAVLGRPVFFVDDDPKADQLAQDTLGEIARAVGLRDIAFQYEPLAAAFDYESQISREELVLVIDIGGGTSDFSLIRLGPQRAGRADRREDILAHGGVHIGGTDFDKQLSLAHVMPLFGLGGQLKTGKDVPSTQYANLACWHTINQAYTRKAAETFAFIQAQAVERDKIGHLMTLIKNREGHWVAIQVEEAKIALSEAPATRIDLARIAPQLAADIDRPAFDISMSGLIDRVEKTVARLLADAGVSAVDTLFFTGGSSRVPCLRERVSALLPGARSVEGDLFGSIGAGLALDARRKFG
>NZ_CP016440.1|WP_043211078.1|242038_243010_+|sigma-54-interacting-transcriptional-regulator
MTPPPPLADTIVGDHPSIVALRDLVLRVARSRASTVLIYGETGTGKGLVARALHDHSARAEKGFTEINCAAIPGNLLESELFGHERGAFTGAVARKEGLLEIAHGGSVFLDEVRELEPMMQAKILTLLDSRRFRRIGAVHELTTDVRFIAATNKILLGEVDAGKFRDDLYYRLQVVSINLPPLRERGDDVFVLADRFLARYNRLHASAFRRIDPAVQEVFRRYRWPGNVRELGNLLERICILDSGETVGLEHLPARIVRDASAPAGAGDYAARTADFQRRMIQAALAAQGGSLAAAAQALGLTRHALRHQMLRLDLEKKPGRA
>NZ_CP016440.1|WP_043210377.1|243046_244009_-|ABC-transporter-substrate-binding-protein
MKTIFRALALCALTAGVQAQQAPTPVPKQIKIVVPFSAGASNDAIARAIAPQLAEQLKTIVIVENRVGAAGVIGSDYVAKSAKDGATLLLTSSTFLTSAATQPRMPYDPVKSFAPVAMVGEGPLVIGVTGAKPYASLADVLEAARAKPDVLNYGTAGIGSLAHLATVMMDDAAKVSMTHVPYKGAANAASDMAGGQIDIMLANYSSLAPLVQSGKIKLVATTARDPHPAFPKLTPAAAILPGYAVDIWVGVFAPAGTPQDLVDRYNQAIGRVARTPESTALLDMDGTVPAAIGSAEFGQRVARDYALWRDVARSHHISVE
>NZ_CP016440.1|WP_029577660.1|244063_244384_-|DUF4387-domain-containing-protein
MPTQKLSELAKTIRSKNAGVNKITFDIIFRDRDTYESVKRSGALTRKSVAALYRIPDARISDFVEYDPGLAIKFTIYRLVPSGSAGDGDIFGAQQYAPLLDLPVQR
>NZ_CP016440.1|WP_043210372.1|244395_245751_-|acyclic-terpene-utilization-AtuA-family-protein
MRSMRIICPNGHLGFAPLRTESFQAGVRARPDYIAADSGSDDVGPVPLGSDTSTSPEAWQRHDLEQMLLAARSQGVPMIIGSAGDTGSNSRVDLYVRIIRELAAKHGLAPFKIGYFYSEVDPEFVRGKMRAGAAIVGLDGYADLTEAELDATARIVAVAGVQPYLKLLEAGADVIIGGRSSDAAVFAAPALHHGFAADQAYYLGKVLECASFCAEPYGGKETVMGEISHEDVRVTAMHPEQRCTIASVAGHAMYERSNPYEEFFAGGKLDMRECHYEQLDEKTTRITGSRFIPSERLTVKLEGSGKVGERYIGLCGVRDPYTIANIDRVIGWARDKVRERFGDNGYELHYKVYGRDGVMGDLEPLRDQPAHELCIMVQGVAPTAEMAEELTLTGLRQMFYARLPDVKGTAGSVSFPLDEVVRASAAYRWTLNHTIPVDDIFELIQTHIIQA
>NZ_CP016440.1|WP_165590413.1|245956_247072_-|diguanylate-cyclase
MPTWRLTRWLAHPGQDVPLDIQRALIGSLFGTLSIFIGGVLNSLMVAAVLAWRVGTPIFYGWVALELFICITRGGILISAHRHARRGGATHTDVYLLLTLGWAGSVGYGITISALSGDWIAIAITCLSAAAMVGGICFRNFGAPRLTAAMVILALGPCIAVPIFNAGWQLWVIGMQLPLYIASMTVAAYKLNAMLVATMRAERENDERARRDFLTGLLNRLGLSLALSEAATLARERGEQHALLYLDLDGFKAVNDTSGHASGDRLLREVAQRLCALAPDGSAIARIGGDEFVLLLRVDRHADPRALGERLIADVSKPYELGEAGEVGISASLGIALIPQHGHDMVDILKAADRALYLAKSAGKGRWAMAA

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Crispr_ID: NZ_CP016440_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016440_2

3641563-3642916

TypeII

Consensus_repeat	Method
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	PILER-CR
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	CRISPRCasFinder
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	CRT

20 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP016440_2

>merge|NZ_CP016440|2|3641563-3642916|PILER-CR,CRISPRCasFinder,CRT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACATGTTTATCGTGATCACGATTTTGTCGTGGATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACGCGGTGGTTCTGCGCCGATTAACATTAATATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACAGTGATCTTCTTCGTAACATAACGCGCTACATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACACTAGCGTTGTAGTTATGTTGCGTGATTGCATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACCGCATCGACGGACCGCAGATCAGATCATCGATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACAAGTCGAAGTACAGCATGTTGAGGGACTAGATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACGTATGCCGTATTCGATGCGCCCCCAGCAGATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTCTTTCACGTCCTTTCCTTGAGAGAGTCCAATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACGGTCGTCACGCCTTCCCGACCGCCGCTGTCATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACAGTGGCGTTTCAGCTGTCATTCCCGTACCTATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACATCAGTCGCATGAAGCTGCCGCCGTACTGAATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACGGGTGAGGGCGTAGAGGGGAATGTTCATGGATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTGGAACAAGAAGTGATCGCACCGCCGGAAGATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTATTTGGATTGGTGCAAGTTCTATCTGGAAATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTTGCCCGTCATGGACGTGACGGCGCCGTCGATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACATCCATCCGAATTCACTACGGGCCAAGCTGATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACATAGCGATGCAGGGACGGCGCGCGTTGACTATTCTAGATCACTGGGAATTGCACTCTAGCCGGAACGGCCGCTCCAGTACCACTCGTGACGAAACTATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACTCAGATGCACTGCTACATCCGCCAGTCCGAATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAACCCTACGCGGGTTCGACTCCCGCAGCCCGCTATTCTAGATCACTGGGAATTGCGCTCTAGCTGAAAA

>NZ_CP016440|2|1|3641563-3642850|PILER-CR
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATGTTTATCGTGATCACGATTTTGTCGTGG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GCGGTGGTTCTGCGCCGATTAACATTAAT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AGTGATCTTCTTCGTAACATAACGCGCTAC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ACTAGCGTTGTAGTTATGTTGCGTGATTGC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	CGCATCGACGGACCGCAGATCAGATCATCG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AAGTCGAAGTACAGCATGTTGAGGGACTAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GTATGCCGTATTCGATGCGCCCCCAGCAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TCTTTCACGTCCTTTCCTTGAGAGAGTCCA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GGTCGTCACGCCTTCCCGACCGCCGCTGTC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AGTGGCGTTTCAGCTGTCATTCCCGTACCT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATCAGTCGCATGAAGCTGCCGCCGTACTGA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GGGTGAGGGCGTAGAGGGGAATGTTCATGG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TGGAACAAGAAGTGATCGCACCGCCGGAAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TATTTGGATTGGTGCAAGTTCTATCTGGAA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TTGCCCGTCATGGACGTGACGGCGCCGTCG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATCCATCCGAATTCACTACGGGCCAAGCTG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATAGCGATGCAGGGACGGCGCGCGTTGACT
ATTCTAGATCACTGGGAATTGCACTCTAGCCGGAAC	GGCCGCTCCAGTACCACTCGTGACGAAACT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TCAGATGCACTGCTACATCCGCCAGTCCGA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC

>NZ_CP016440|2|2|3641563-3642916|CRISPRCasFinder
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATGTTTATCGTGATCACGATTTTGTCGTGG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GCGGTGGTTCTGCGCCGATTAACATTAAT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AGTGATCTTCTTCGTAACATAACGCGCTAC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ACTAGCGTTGTAGTTATGTTGCGTGATTGC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	CGCATCGACGGACCGCAGATCAGATCATCG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AAGTCGAAGTACAGCATGTTGAGGGACTAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GTATGCCGTATTCGATGCGCCCCCAGCAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TCTTTCACGTCCTTTCCTTGAGAGAGTCCA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GGTCGTCACGCCTTCCCGACCGCCGCTGTC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AGTGGCGTTTCAGCTGTCATTCCCGTACCT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATCAGTCGCATGAAGCTGCCGCCGTACTGA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GGGTGAGGGCGTAGAGGGGAATGTTCATGG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TGGAACAAGAAGTGATCGCACCGCCGGAAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TATTTGGATTGGTGCAAGTTCTATCTGGAA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TTGCCCGTCATGGACGTGACGGCGCCGTCG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATCCATCCGAATTCACTACGGGCCAAGCTG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATAGCGATGCAGGGACGGCGCGCGTTGACT
ATTCTAGATCACTGGGAATTGCACTCTAGCCGGAAC	GGCCGCTCCAGTACCACTCGTGACGAAACT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TCAGATGCACTGCTACATCCGCCAGTCCGA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	CCTACGCGGGTTCGACTCCCGCAGCCCGCT
ATTCTAGATCACTGGGAATTGCGCTCTAGCTGAAAA

>NZ_CP016440|2|1|3641563-3642916|CRT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATGTTTATCGTGATCACGATTTTGTCGTGG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GCGGTGGTTCTGCGCCGATTAACATTAAT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AGTGATCTTCTTCGTAACATAACGCGCTAC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ACTAGCGTTGTAGTTATGTTGCGTGATTGC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	CGCATCGACGGACCGCAGATCAGATCATCG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AAGTCGAAGTACAGCATGTTGAGGGACTAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GTATGCCGTATTCGATGCGCCCCCAGCAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TCTTTCACGTCCTTTCCTTGAGAGAGTCCA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GGTCGTCACGCCTTCCCGACCGCCGCTGTC
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	AGTGGCGTTTCAGCTGTCATTCCCGTACCT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATCAGTCGCATGAAGCTGCCGCCGTACTGA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	GGGTGAGGGCGTAGAGGGGAATGTTCATGG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TGGAACAAGAAGTGATCGCACCGCCGGAAG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TATTTGGATTGGTGCAAGTTCTATCTGGAA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TTGCCCGTCATGGACGTGACGGCGCCGTCG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATCCATCCGAATTCACTACGGGCCAAGCTG
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	ATAGCGATGCAGGGACGGCGCGCGTTGACT
ATTCTAGATCACTGGGAATTGCACTCTAGCCGGAAC	GGCCGCTCCAGTACCACTCGTGACGAAACT
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	TCAGATGCACTGCTACATCCGCCAGTCCGA
ATTCTAGATCACTGGGAATTGCGCTCTAGCCGGAAC	CCTACGCGGGTTCGACTCCCGCAGCCCGCT
ATTCTAGATCACTGGGAATTGCGCTCTAGCTGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016440.1\|WP_043213451.1\|3641186_3641492_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP016440.1\|WP_043213759.1\|3635509_3636496_-\|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl\|CDD\|234593
NZ_CP016440.1\|WP_048026271.1\|3643081_3643906_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP016440.1\|WP_043213464.1\|3630804_3631704_+\|NAD-kinase	unknown	unknown	gnl\|CDD\|179379
NZ_CP016440.1\|WP_082149603.1\|3652471_3653224_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|379263
NZ_CP016440.1\|WP_043213438.1\|3650651_3651260_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP016440.1\|WP_043213458.1\|3634083_3634641_+\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|367908
NZ_CP016440.1\|WP_043213457.1\|3634657_3635449_+\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
NZ_CP016440.1\|WP_043213447.1\|3644979_3645921_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP016440.1\|WP_043213449.1\|3643910_3644684_+\|thiol:disulfide-interchange-protein-DsbG	unknown	unknown	gnl\|CDD\|183262
NZ_CP016440.1\|WP_043213440.1\|3649384_3650569_+\|2-methylaconitate-cis-trans-isomerase-PrpF	unknown	unknown	gnl\|CDD\|131387
NZ_CP016440.1\|WP_043213455.1\|3637104_3640221_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187774
NZ_CP016440.1\|WP_043213467.1\|3629690_3630695_-\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_CP016440.1\|WP_043213435.1\|3651382_3652408_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP016440.1\|WP_043213462.1\|3631721_3633377_+\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|223571
NZ_CP016440.1\|WP_043213433.1\|3653220_3653928_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP016440.1\|WP_043213453.1\|3640227_3641157_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP016440.1\|WP_043213460.1\|3633443_3633863_-\|ferric-iron-uptake-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366663
NZ_CP016440.1\|WP_043213443.1\|3646714_3649330_+\|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD	unknown	unknown	gnl\|CDD\|131386
NZ_CP016440.1\|WP_043213445.1\|3646010_3646718_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715

Protein	Function_ID	Function_description	E-value
NZ_CP016440.1\|WP_043213451.1\|3641186_3641492_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	8.41111e-23
NZ_CP016440.1\|WP_043213759.1\|3635509_3636496_-\|UDP-N-acetylmuramate-dehydrogenase	gnl\|CDD\|234593	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase.	0
NZ_CP016440.1\|WP_048026271.1\|3643081_3643906_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.74882e-39
NZ_CP016440.1\|WP_043213464.1\|3630804_3631704_+\|NAD-kinase	gnl\|CDD\|179379	PRK02155, ppnK, NAD kinase.	8.57165e-178
NZ_CP016440.1\|WP_082149603.1\|3652471_3653224_-\|SDR-family-oxidoreductase	gnl\|CDD\|379263	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase.	1.45453e-61
NZ_CP016440.1\|WP_043213438.1\|3650651_3651260_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	1.58075e-37
NZ_CP016440.1\|WP_043213458.1\|3634083_3634641_+\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|367908	pfam04355, SmpA_OmlA, SmpA / OmlA family. Lipoprotein Bacterial outer membrane lipoprotein, possibly involved in in maintaining the structural integrity of the cell envelope. Lipid attachment site is a conserved N terminal cysteine residue. Sometimes found adjacent to the OmpA domain (pfam00691).	4.38056e-32
NZ_CP016440.1\|WP_043213457.1\|3634657_3635449_+\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	2.21775e-132
NZ_CP016440.1\|WP_043213447.1\|3644979_3645921_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	8.0109e-33
NZ_CP016440.1\|WP_043213449.1\|3643910_3644684_+\|thiol:disulfide-interchange-protein-DsbG	gnl\|CDD\|183262	PRK11657, dsbG, disulfide isomerase/thiol-disulfide oxidase; Provisional.	1.22375e-117
NZ_CP016440.1\|WP_043213440.1\|3649384_3650569_+\|2-methylaconitate-cis-trans-isomerase-PrpF	gnl\|CDD\|131387	TIGR02334, conserved_hypothetical_protein, probable AcnD-accessory protein PrpF. The 2-methylcitrate cycle is one of at least five degradation pathways for propionate via propionyl-CoA. Degradation of propionate toward pyruvate consumes oxaloacetate and releases succinate. Oxidation of succinate back into oxaloacetate by the TCA cycle makes the 2-methylcitrate pathway a cycle. This family consists of PrpF, an incompletely characterized protein that appears to be an essential accessory protein for the Fe/S-dependent 2-methylisocitrate dehydratase AcnD (TIGR02333). This protein is related to but distinct from FldA (part of pfam04303), a putative fluorene degradation protein of Sphingomonas sp. LB126. [Energy metabolism, Fermentation].	0
NZ_CP016440.1\|WP_043213455.1\|3637104_3640221_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|187774	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Very large protein containing McrA/HNH-nuclease related domain and a RuvC-like nuclease domain; signature gene for type II.	1.19261e-88
NZ_CP016440.1\|WP_043213467.1\|3629690_3630695_-\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	7.84229e-148
NZ_CP016440.1\|WP_043213435.1\|3651382_3652408_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	2.4507e-138
NZ_CP016440.1\|WP_043213462.1\|3631721_3633377_+\|DNA-repair-protein-RecN	gnl\|CDD\|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0
NZ_CP016440.1\|WP_043213433.1\|3653220_3653928_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.63749e-42
NZ_CP016440.1\|WP_043213453.1\|3640227_3641157_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.33916e-75
NZ_CP016440.1\|WP_043213460.1\|3633443_3633863_-\|ferric-iron-uptake-transcriptional-regulator	gnl\|CDD\|366663	pfam01475, FUR, Ferric uptake regulator family. This family includes metal ion uptake regulator proteins, that bind to the operator DNA and controls transcription of metal ion-responsive genes. This family is also known as the FUR family.	5.60215e-58
NZ_CP016440.1\|WP_043213443.1\|3646714_3649330_+\|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD	gnl\|CDD\|131386	TIGR02333, 2-methyl_citrate_dehydratase_Fe-S_dependent_AcnD, 2-methylisocitrate dehydratase, Fe/S-dependent. Members of this family appear in an operon for the degradation of propionyl-CoA via 2-methylcitrate. This family is homologous to aconitases A and B and appears to act the part as 2-methylisocitrate dehydratase, the enzyme after PrpD and before PrpB. In Escherichia coli, which lacks a member of this family, 2-methylisocitrate dehydratase activity was traced to aconitase B (TIGR00117) ().	0
NZ_CP016440.1\|WP_043213445.1\|3646010_3646718_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.35003e-53

>NZ_CP016440.1|WP_043213451.1|3641186_3641492_+|CRISPR-associated-endonuclease-Cas2
MWMLVMFDLPVLEKAERKAASAFRNTLLDLGFEMSQFSVYLRFCTSQAQLDTLCKSVEQCLPEGGKVHVLQFTDKQYERTITYQGKSRQPSKKAPDQFDLF
>NZ_CP016440.1|WP_043213453.1|3640227_3641157_+|type-II-CRISPR-associated-endonuclease-Cas1
MIGRIVEIADDRRHLYVNRGFLVVKDTEGERKELGQIPLDDIAAVVANAHGLSYTNNLLVALAERGAPFVLCGSNHNVIGMLLSVDSHHIQAKRIEAQIAAALPTHKRLWATVIRAKLAQQAATLIATGAPSAPLLALVRKVKSGDPENIEGQGARRYWTLLFGPDFRRDIDGGSLNGLLNYGYTILRSATARAIIAAGLHPSIGLHHSNDANAMRLVDDLMEPFRPILDLKVWQLRKAGETHVTPETKRSLVHVLHDDMQTKTGVTPVMVCMQRLAVSLAQVYLGERKDLELPLPGLPISLANSLNGD
>NZ_CP016440.1|WP_043213455.1|3637104_3640221_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MAKQVRYRLSLDLGSTSLGWAIFRLDADAHPTAIIKAGVRIFSDGRNAKDGSSLAVTRRAARSMRRRRDRLLRRKTRMLDALLEYGFFPQDAAQRKALERLNPYALRAEGLARPLTPGEFARAIFHLNQRRGFKSNRKTDKNDNDSGALKTATSQLRQDIQASGCRTVGEWLWTQRLQKKPEGVPHQGVRARYRETPHINSEGKKRIEKKYDLYIDRSMIEAEFDALWSAQATFNPVVFHATAHEKLKDILLYQRPLRPVKPGRCTLLPEEERAPLALPSTQRFRIYQELNNLRLLVDQLNEQPLTLAQRDTIATLMEGRAKISFDQIRKALKLGSMTKFNLEDDKRNELKGNATGSQLAKKEFFGPAWHQFDEALQDDIVWHLLSEENESALISWLQDRTGIDAATAQAVSNASLPEGYGSLSRKALEVILPRLRSEVITYDKAVQAAGFSHHSQLGFEYDPDDVEDWIDHATGEVKPIFKRLPYYGKALQRHVAFGSGKPEDSQEKRYGKIANPTVHIGLNQVRVVANALIARYGRPTEIIIELARDLKQSREQRQQDQRRQADNQKRNARIRNSIAQALGIAEARVRREDIQKWILWEELDPGDAMHRCCPYSGVPISASMLLSEQVEIEHILPFSMTLDDSLNNRTVSLRQANRIKRNRSPWDAREDFEAQGWHYDGILQRAGLMPVQKRYRFAADGYQRWLRDDQDFLARALNDTRYLSRIAAEYLRLVCPQGTRVIPGQLTALLRRRFGLNDILGLEGEKNRNDHRHHAVDACVIGITDHGLMQRFARASAQAREQGLTRLAEEMPLPWPTYRDHVDRAVSLIWVSHKPDHGHEGAMMEETAYGLMKDGTIRQRHKADGTKGREVANVIRIAEPAQPTRHGVDDQGRPLPYKGYIGGSNYCIEITRGAQGKWEGTVISTSDAYGIVRARGIAGLRNTSQGQNGHPLVMRLVIGDSLRLRINDALQTMRVTKISGNGQVFMAGVHEANVDARNRDKSQAFALVSKMAGSLQAAQARQATISPIGEIRDPGFPG
>NZ_CP016440.1|WP_043213759.1|3635509_3636496_-|UDP-N-acetylmuramate-dehydrogenase
MRGLNTFGLASRADAFVTLEDEAQLPALSALAAAYPACFVLGGGSNLVLGETVDGLVARVALRGIRLVEARPDAWIVEAAAGERWHDFVAHCVEQGWDGLENLALIPGTVGAAPVQNIGAYGVELADRFDSLTAWDLREARAVRFSAADCRFAYRDSVFKREPGRWLITRVRFALPRPWRAVLEYPDLQRWPALQQGPADARAIFQAVCDIRRAKLPDPAVVGNAGSFFKNPLVDAATRERLQARFPGLVSYPQPDGRYKLAAGWLIDQCGWKGRGLGPAAVHDRQALVLVNRGGARAADILALAAAIQDDVMARYGVRLEPEPIVVR
>NZ_CP016440.1|WP_043213457.1|3634657_3635449_+|4-hydroxy-tetrahydrodipicolinate-reductase
MRIAIAGASGRMGHMLIEAVLNTEGVELAVALDRKGSPSLGQDAGAFLGRDTGVRITDDLDSLSGADCLIDFTRPEGTLEHLQACLRHGTRMVIGTTGFDDAGRAAIEVAAQKIAVVFAPNMSVGVNATLKLLDMAARILNSGYDVEVFEAHHRNKVDAPSGTALAMGEAVASAWNVALPDVATWTRHGDTGPRKPGTIGFSVVRGGDIVGDHTVYFCGTGERIEITHRSSSRATYAEGAVRAAKFLDGKHNGLYDMQAVLGL
>NZ_CP016440.1|WP_043213458.1|3634083_3634641_+|outer-membrane-protein-assembly-factor-BamE
MIARNPSRPIKAVLGTLVLAAALAGCSSGKWGFPYRADMQQGNWITREQVALLQPGMSREQVRFALGSPTLTSVLHADRWDYPYYFKPGYGKAEERHFTVFFENDRLVRWSGDEQPELQPFQINKVDAERAEKAANTEDTAEKREEQAEKAEKAEQARPHIQVNSPVSPTNAYPGLPGNAPEPLK
>NZ_CP016440.1|WP_043213460.1|3633443_3633863_-|ferric-iron-uptake-transcriptional-regulator
MSDQSELKNMGLKATFPRLKILDIFRKSDQRHLSAEDVYRALIGESVEIGLATVYRVLTQFEQAGILSRSQFDTGKAVFELNDGDHHDHLICTNCGKVVEFSDVDIEKRQHKVAKDNGFVLESHAMVLYGICSDCQRAR
>NZ_CP016440.1|WP_043213462.1|3631721_3633377_+|DNA-repair-protein-RecN
MLRTLHIRDFVIVEQTEIHFGAGFTVFTGETGAGKSILIDALALALGERGDASVLREGAARADITAIFDTPAHLSAWLAERELEPAEELSLRRVIDAQGRSRAYINGMPATVTQLRELGDTLVDIHGQHAHQSLMRPDAQRELLDAHGGHGELRQVVAQAWKHWRGLARQLETAEQDAEALAAERERLQWQTEDLDRLNLAEGEWDALQAEHSRLSHAQSLLDGASQILEALDGEQDSALSRLNAASHRLQQMQRHDSGLGGIAEELESARIAMSEAVSDLNNYLSRVDLDPDRLNAAEARLSAVFETARKFKTEPEHLAALHGSLREQLAQLQAAGDVDALRAQAEAARAQYDSAAALLTEARRKVARDLGKQVTQAMQTLSMSGGRFEAALAAGPASAQGNETVEFLVAGHAGTTPRPLAKVASGGELSRISLALSVIASRAARVPTLIFDEVDSGVGGAVAEVVGKLLHELGGRHQVLCVTHLPQVAACGNHQFRVSKTEKGGVTRSRIVELDADERIEEVARMLGGITITSTTRDHAREMLQNTRAA
>NZ_CP016440.1|WP_043213464.1|3630804_3631704_+|NAD-kinase
MHFPIVALIGRYQDTGLDAPLRALADMLTQAGRRVLVDADTARNTGVHEFPEATLQEIGESASLAVVMGGDGTVLGAARHLAPYGVPLVGINHGRLGFITDIPLQDARQALARVLDGNFQIEERMLLQGSVWRGDAQMYSASALNDVVLNRAGRGGMIEMRVELDGVYMYTQRADGLIIATPTGSTAYALSAAGPLLHPGLNAMVLVPVAPQSLSNRPIVIPDTGVLNMTLTAIGRVETGASVHFDMQTWSDLQLGDRITVQRAPHTARLVHPQGYSFFSTLRRKLHWNLMPQATDNIE
>NZ_CP016440.1|WP_043213467.1|3629690_3630695_-|heat-inducible-transcriptional-repressor-HrcA
MDDRARALLKALIERYIADGQPVGSRTLSKVFDLSPATIRNVMADLEELGLIHSPHTSAGRVPTPRGYRMFVDSLLAVHPYQFEPANMGELLPMVEPSRAVNAAAALLSNLTQFAGVVLTPKRAQVFRQIEFVRLTDKRVLLIIVTPDGDVQNRIMQVQRDYAESELVEAANFFNQHFSGKSFDAVRRTLSTELTQLREDISRLMQAAVEAGAEAADEGDSVVISGERKLLDVTDIASDMDRLRKMFALFEKKTDLLQLLDVSSRAQGVQIYIGGDSQLVPMDEVTVVTAPYGVDGQIVGTLGVIGPTRMSYERVIPIVDITARLLSNALSHNQ
>NZ_CP016440.1|WP_048026271.1|3643081_3643906_+|TlpA-family-protein-disulfide-reductase
MHSVGPFSVQVIAVALAAVLAWLAARLLWRKDGTGKRAAAVLLDALLIGLLAARALYVLRWWPDYSAAPRAIVSVGDGGFYWWAGLPAGLAYLAWRTRGLPPLRQAALGSAAIGIAVWTFAQGYIVQARRASLPALALETLDARPVSLDQYAGQPLVINLWASWCPPCRREMPVLAQAQADYPGVRFLLINQGEDAATVRDFLARQGLAFKDVLLDPASRAMPALRTRGLPTTLFFDAQGRLAQAHMGELTAARLRQTLQDPLMSPPDAIRLQE
>NZ_CP016440.1|WP_043213449.1|3643910_3644684_+|thiol:disulfide-interchange-protein-DsbG
MFSTKSLVSALLGIAALGAAANGFAGEPERPAVIRALERQGLSHVQELGKVSGLRGYAGMAGQQPITIYVADDGNAIVGSRISPEGENLDEARVQELVAKPMGEAIWKQLDESTWVADGKARAPRVVYAFSDPNCPYCNRFWEAARPWVDAGKVQLRHIIVGVIRADSSTKAAAILGAPDRSAALLENERHFRQGGIKPAASVPAAIRDSLDNNQILMAELGFRGTPGILYKDEQGRVQRVNGMPRPEALERVLGPR
>NZ_CP016440.1|WP_043213447.1|3644979_3645921_+|LysR-family-transcriptional-regulator
MNTQQLDYLKQAVKAGSFSRAADILGLSQSRLSRQVAALEQEMGCPLLRRHGRGVAATAAGERLLALAETFLQEVARLKSAGAGRGLQGEFKLGVPMFFSQSLAPDLMAAVRSRYPGLSFTVREGPSGDLHDWLLAGELSAAVIHESKRPRQLEGDALFLEPVFVVGTRELARRHGLPLDRGLSLRELARLPILVPTRRHGTRLDFDALMRRHRLTPDIVHEVDALGARMLLARSGAGVTIFESAGLLAERKDPSLFVLPLADPAFFHRLVWVDAREPERGAQWRGLLRFLKRGIVRLRQDLGDGGPAKLLQS
>NZ_CP016440.1|WP_043213445.1|3646010_3646718_+|GntR-family-transcriptional-regulator
MDQPILPSDLPGDSETLSDQLFRKLQSAIIKGEIAPGSKMSEPELARAHGVSRGPLREALHRLEGQRLLVRVPHAGARVVSLSPKELSELYEIRESLEGMACRLAAARMPAAEVQQLRDVLHAHEKDAAFQAGLGYYQQEGDYDFHYRIVKGSGNEMLFRMLCDELYQLARMYRIQYSNTPNRPRQSYAEHHRILDAIAEGDGELAELLMRRHIRASRLNIEQQITQGNQPESEA
>NZ_CP016440.1|WP_043213443.1|3646714_3649330_+|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD
MNHSYRKPLPGTRLDYFDARAAVEAIAPGAYDELPYTSRVLAENLVRRCDPALLNDALKQLIERRRDLDFPWYPARVVCHDILGQTALVDLAGLRDAIADKGGDPAKVNPVVPVQLIVDHSLAVEYGGDDPDAFAKNRAVEDRRNEDRFHFIDWTKQAFRNIDIVPPGNGIMHQINLERMSPVIYTQDGVAYPDTLVGTDSHTPHVDALGVIAIGVGGLEAENVMLGRASWMRLPDIIGVELTGRPQAGITATDIVLTLTEFLRKEKVVGAYLEFHGEGAAALTLGDRATISNMAPEYGATAAMFAIDQQTIAYLRLTGREESQVALVETYAKTAGLWADSLTTARYERVLRFDLGSVVRTLAGPSNPHRRLPVSALAERGIAGKVENTPGQMPDGAVIIAAITSCTNTSNPRNVIAAGLLARNANRAGLKRQPWVKSSLAPGSKTVALYLEEAGLLPELEKLGFGVVAFACTTCNGMSGALDPAIQQEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTIRFDIERDVLGVDAQGREIRLADIWPSDEEIDAVVSSAVKPEQFRKVYAPMFGIQDDRKSAVDPLYPWRPMSTYIRRPPYWEGALAGERTLRGMRPLAVLGDNITTDHLSPSNAIMLDSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKNEDGSVRQGSLARVEPEGKVMRMWEAIETYMERKQPLIIVAGADYGQGSSRDWAAKGVRLAGVETIVAEGFERIHRTNLIGMGVLPLEFKPGVNRKTLGLDGTETYDVVGQRKPRADLTLVIHRRDGRREEVAVTCRLDTAEEVSIYEAGGVLQRFAQDFLEAASAADARQAG
>NZ_CP016440.1|WP_043213440.1|3649384_3650569_+|2-methylaconitate-cis-trans-isomerase-PrpF
MAHAPQIRIPATYMRGGTSKGVFFKLDDLPASARVPGPARDALLMRVIGSPDPYGKQIDGMGAATSSTSKTVILSKSSRPGHDVDYLFGQVAIDQPFVDWSGNCGNLSAAVGPFAITNGLVDADRVPANGIAVVRIWQANIGKTIVAHVPMTDGAVQETGDFELDGVTFPAAEIQLEFMNPAEEGDGGSMFPTGNVVDELDVPGVGRFKATMINSGIPTIFLDAEALGYKGTELQDDINGDPAALARFETIRAHGALRMGLIGKLEEAASRQHTPKVAFVAPPREYLASSGKRIAQSDVDVLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAGGGQRDTVCFGHPSGTLRVGAKAELVDGEWTVTKAIMSRSARILMEGRVHLPRDGF
>NZ_CP016440.1|WP_043213438.1|3650651_3651260_+|LysE-family-translocator
MALHSWLIYLVAVTGLSLTPGPNTLLALTHGALHGHRRALCTIAGGAVGFIALIALSMLGISALLKAWAPALTLLKWAGGAYLVWLGLQLWRAPGVQLQPTPGMPGLRATRMFSQGFLSAISNPKALLFYGAFLPQFIDPARSLLTQFVVMAATFAGIEFVVEYLLARLAHRVRPWLERSGRRFNKLCGGLFAAMGIALPTT
>NZ_CP016440.1|WP_043213435.1|3651382_3652408_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MNTGIFSTAGASLRRSLLKRAALPLLAGVLGMSAMAGAMASDAYPSRPVTIIVPFPAGGATDITARLVAEGLSKKWGQGVVVENRPGAGGNLGSEYVARAAPDGYTLVLGVTGSHSINTSLYKNMRYDPRKDFEPITQATLYPNAIVVNNDVPAKNLTELIALLKKGVVQYSYGSDGNGTASHLGMELLKNRGQFALTHIPYRGSAPMVTDLLGGQIQVGITGLPAVQAYAKSGKLRIIALTTGERFASAPDYPTVAEQGFPGFAAPPWSGFFAPKGTPKALVEKISADMREVMADPAAKQKMIAAGSEFTPSTPEQFGVFVEKEIAKWAEAVKISGASVD
>NZ_CP016440.1|WP_082149603.1|3652471_3653224_-|SDR-family-oxidoreductase
MTTDLSGQVVVITGAAGDLGWGMARACLDAGARVALIDLDADALARLGEAGDERLLRLQCDVADPIQTRGVVDTVLARWDRIDVLVNNAAVVTPGDKIGDLSAANWHQALSINLTGAWLMSKWALAPMRRARRGVVINVASQLGSVAAAGRGAYGASKAGMIALARAIAVDHADEGIRALSLSPGAVLTGRVLRRYGNAEAARQALAPRYPLGRLGEVEEVARTALFLMGKDAAFITGTDVRVDGGYTAI
>NZ_CP016440.1|WP_043213433.1|3653220_3653928_-|SDR-family-oxidoreductase
MSVDRAAVITGSASGIGLALTRHLLDAGWRVHGIDRQPWPAGAHAGYTHHLRDLTDIPGISGLADALPARLRAFVHCAGVMRSGGVGDSRAEDTELLWRLHGAAPLALVGLLGPRLTPALGRIVLLSSRAVLGRAQRAAYAATKAAQIGMARSLAAELIGRGITVNVVAPGAVDTPMLNDPRRGAPPKVDLPLGRLIRPDEVVAAIDFFLAPQAGAVTGQTLYVCGGASLGAMAV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NZ_CP013125	Pseudomonas mendocina S5.2 plasmid pPME5, complete sequence	54525-54554	4	0.867
NZ_CP016440_2	2.2\|3641665\|29\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641665-3641693	29	MH617757	Microviridae sp. isolate ctbb740, complete genome	977-1005	5	0.828
NZ_CP016440_2	2.9\|3642125\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642125-3642154	30	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	583914-583943	6	0.8
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	MK416013	Klebsiella phage ST16-OXA48phi5.1, complete genome	56782-56811	6	0.8
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	NZ_CP027613	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence	94122-94151	6	0.8
NZ_CP016440_2	2.19\|3642785\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642785-3642814	30	NZ_CP028969	Aminobacter sp. MSH1 plasmid pUSP1, complete sequence	191480-191509	6	0.8
NZ_CP016440_2	2.19\|3642785\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642785-3642814	30	NZ_CP026266	Aminobacter sp. MSH1 plasmid pAM01, complete sequence	188774-188803	6	0.8
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	LN997803	Escherichia coli phage phi467	15054-15083	6	0.8
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NZ_CP049914	Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence	519883-519912	6	0.8
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NZ_LN868946	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence	104106-104135	6	0.8
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_016158	Escherichia phage HK639, complete genome	44485-44514	6	0.8
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	KC292023	Halovirus HRTV-4, complete genome	9751-9780	6	0.8
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK867354	Synechococcus phage S-SCSM1, complete genome	100956-100985	6	0.8
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	KY945355	Mycobacterium phage Shandong1, complete genome	25310-25339	6	0.8
NZ_CP016440_2	2.1\|3641599\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641599-3641628	30	NZ_CP013633	Rhizobium sp. N324 plasmid pRspN324c, complete sequence	343818-343847	7	0.767
NZ_CP016440_2	2.1\|3641599\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641599-3641628	30	MN693765	Marine virus AFVG_250M576, complete genome	28602-28631	7	0.767
NZ_CP016440_2	2.6\|3641928\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641928-3641957	30	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	879023-879052	7	0.767
NZ_CP016440_2	2.7\|3641994\|29\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641994-3642022	29	NZ_AP014803	Rhodovulum sulfidophilum plasmid Plasmid3 DNA, complete genome, strain: DSM 2351	43141-43169	7	0.759
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	LR134277	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 2	4735-4764	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	15820-15849	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	MK416022	Klebsiella phage ST846-OXA48phi9.2, complete genome	48416-48445	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	MF695815	Klebsiella phage KPP5665-2, complete genome	15485-15514	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	51724-51753	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	MK416008	Klebsiella phage ST405-OXA48phi1.3, complete genome	29852-29881	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	KY271399	Klebsiella phage 5 LV-2017, complete genome	45105-45134	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	LR134279	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 4	15156-15185	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	NZ_CP046951	Klebsiella pneumoniae strain BD_DM_914 plasmid punnamed2, complete sequence	78332-78361	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	NZ_CP046941	Klebsiella pneumoniae strain BD_DM_697 plasmid punnamed2	78324-78353	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	NZ_CP046383	Klebsiella pneumoniae strain BD_DM_782 plasmid punnamed2, complete sequence	78313-78342	7	0.767
NZ_CP016440_2	2.10\|3642191\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642191-3642220	30	MK448234	Klebsiella phage ST11-VIM1phi8.2, complete genome	215-244	7	0.767
NZ_CP016440_2	2.11\|3642257\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642257-3642286	30	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	176525-176554	7	0.767
NZ_CP016440_2	2.11\|3642257\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642257-3642286	30	NC_010811	Ralstonia phage RSL1, complete genome	95065-95094	7	0.767
NZ_CP016440_2	2.11\|3642257\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642257-3642286	30	AB366653	Ralstonia phage RSL1 DNA, complete genome	95065-95094	7	0.767
NZ_CP016440_2	2.11\|3642257\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642257-3642286	30	NZ_CP016619	Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence	953395-953424	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018851	Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.1, complete sequence	149187-149216	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018468	Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete sequence	20215-20244	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018472	Xanthomonas perforans strain LH3 plasmid pLH3.1, complete sequence	157600-157629	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP023286	Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pCuR, complete sequence	219503-219532	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018859	Xanthomonas citri pv. citri strain LH201 plasmid pLH201.1, complete sequence	201632-201661	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018848	Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.1, complete sequence	30050-30079	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018855	Xanthomonas citri pv. citri strain LH276 plasmid pLH276.1, complete sequence	17035-17064	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018729	Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence	17202-17231	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018726	Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.1, complete sequence	8988-9017	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP018732	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence	116121-116150	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NC_048791	Corynebacterium phage Adelaide, complete genome	24199-24228	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	89975-90004	7	0.767
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	176971-177000	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	447064-447093	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359314	Mycobacterium phage Ewok, complete genome	93149-93178	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359337	Mycobacterium phage Flabslab, complete genome	91391-91420	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MN234193	Mycobacterium phage Kboogie, complete genome	92147-92176	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK450432	Mycobacterium phage ValleyTerrace, complete genome	92083-92112	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MH779502	Mycobacterium phage FudgeTart, complete genome	92206-92235	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359365	Mycobacterium phage Loanshark, complete genome	92953-92982	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359364	Mycobacterium phage ChickenPhender, complete genome	92534-92563	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MH697586	Mycobacterium phage InigoMontoya, complete genome	92747-92776	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK112541	Mycobacterium phage Jessibeth14, complete genome	93323-93352	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359347	Mycobacterium phage Ading, complete genome	93045-93074	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK450425	Mycobacterium phage Shelob, complete genome	94186-94215	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_023714	Mycobacterium phage LinStu, complete genome	92973-93002	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359339	Mycobacterium phage Naija, complete genome	92786-92815	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	KT321476	Mycobacterium phage Zeenon, complete genome	92931-92960	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MN428065	Mycobacterium phage Cactojaque, complete genome	92407-92436	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	JN699625	Mycobacterium phage Wally, complete genome	91655-91684	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	KX721255	Mycobacterium phage Yucca, complete genome	92845-92874	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359366	Mycobacterium phage Basquiat, complete genome	91765-91794	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359346	Mycobacterium phage NoodleTree, complete genome	93157-93186	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359361	Mycobacterium phage Darko, complete genome	92784-92813	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MH779498	Mycobacterium phage Bread, complete genome	92693-92722	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MG812494	Mycobacterium phage Pier, complete genome	95346-95375	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MT818423	Mycobacterium phage Janiyra, complete genome	93764-93793	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359328	Mycobacterium phage EmmaElysia, complete genome	92436-92465	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359335	Mycobacterium phage Patter, complete genome	92100-92129	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MT889395	Mycobacterium phage Shifa, complete genome	92260-92289	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	EU826467	Mycobacterium phage Rizal, complete genome	91160-91189	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MT723944	Mycobacterium phage ChaylaJr, complete genome	92233-92262	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	KR080196	Mycobacterium phage Momo, complete genome	92083-92112	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359318	Mycobacterium phage Specks, complete genome	94696-94725	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK112548	Mycobacterium phage McWolfish, complete genome	92850-92879	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359338	Mycobacterium phage Amataga, complete genome	92083-92112	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MT723945	Mycobacterium phage Quasimodo, complete genome	94204-94233	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK112533	Mycobacterium phage Bonray, complete genome	93415-93444	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK450422	Mycobacterium phage RoMag, complete genome	92974-93003	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359327	Mycobacterium phage EmToTheThree, complete genome	94029-94058	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359336	Mycobacterium phage Chargie21, complete genome	91765-91794	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_023696	Mycobacterium phage Dandelion, complete genome	96533-96562	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MN276192	Mycobacterium phage Trinitium, complete genome	92710-92739	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359349	Mycobacterium phage FoxtrotP1, complete genome	94238-94267	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	JF704096	Mycobacterium phage Ghost, complete sequence	92786-92815	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359344	Mycobacterium phage Napoleon13, complete genome	91462-91491	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MH727558	Mycobacterium phage Salacia, complete genome	93410-93439	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359363	Mycobacterium phage Fludd, complete genome	93342-93371	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359329	Mycobacterium phage Kamryn, complete genome	93782-93811	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MN183280	Mycobacteriophage LolaVinca, complete genome	93740-93769	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359321	Mycobacterium phage Phusco, complete genome	92409-92438	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359362	Mycobacterium phage Atlantean, complete genome	92083-92112	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK310143	Mycobacterium phage Dietrick, complete genome	91535-91564	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MH051266	Mycobacterium phage MikeLiesIn, complete genome	93503-93532	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MH669008	Mycobacterium phage Megamind, complete genome	92779-92808	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK878897	Mycobacterium phage Blackbrain, complete genome	92300-92329	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MT818416	Mycobacterium phage BackyardAgain, complete genome	91561-91590	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_028869	Mycobacterium phage HyRo, complete genome	92291-92320	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	KT365400	Mycobacterium phage ErnieJ, complete genome	91809-91838	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359353	Mycobacterium phage BadAgartude, complete genome	92913-92942	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MH697590	Mycobacterium phage Phlegm, complete genome	92786-92815	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359317	Mycobacterium phage FrayBell, complete genome	93418-93447	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MN428066	Mycobacterium phage JPickles, complete genome	90939-90968	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	DQ398053	Mycobacteriophage Catera, complete genome	91419-91448	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK450424	Mycobacterium phage Melpomini, complete genome	91035-91064	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK450423	Mycobacterium phage Stubby, complete genome	92337-92366	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MF919493	Mycobacterium phage Audrick, complete genome	92765-92794	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_008207	Mycobacterium phage Catera, complete genome	91419-91448	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK359326	Mycobacterium phage Pivoine, complete genome	92786-92815	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	1204-1233	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	104411-104440	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	107079-107108	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	108138-108167	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	108138-108167	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NC_008195	Mycobacterium phage Cooper, complete genome	18923-18952	7	0.767
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	KY979132	Acidovorax phage ACP17, complete genome	319-348	7	0.767
NZ_CP016440_1	1.1\|237207\|30\|NZ_CP016440\|CRISPRCasFinder	237207-237236	30	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	552130-552159	8	0.733
NZ_CP016440_2	2.9\|3642125\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642125-3642154	30	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	287423-287452	8	0.733
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1232726-1232755	8	0.733
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	NZ_CP032328	Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence	101765-101794	8	0.733
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MK620899	Gordonia phage GodonK, complete genome	77720-77749	8	0.733
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MN096369	Gordonia phage Phendrix, complete genome	77439-77468	8	0.733
NZ_CP016440_2	2.5\|3641862\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641862-3641891	30	NZ_CP029986	Sphingomonas sp. FARSPH plasmid p01, complete sequence	80042-80071	9	0.7
NZ_CP016440_2	2.6\|3641928\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641928-3641957	30	NZ_KU356480	Vibrio parahaemolyticus strain VPS92 plasmid pVPS92-VEB, complete sequence	185618-185647	9	0.7
NZ_CP016440_2	2.6\|3641928\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641928-3641957	30	NZ_CP053812	Vibrio cholerae strain W6G plasmid pW6G, complete sequence	29627-29656	9	0.7
NZ_CP016440_2	2.6\|3641928\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3641928-3641957	30	NZ_CP053815	Vibrio cholerae strain W7G plasmid pW7G, complete sequence	291939-291968	9	0.7
NZ_CP016440_2	2.9\|3642125\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642125-3642154	30	KF986246	Mycobacterium phage MichelleMyBell, complete genome	35254-35283	9	0.7
NZ_CP016440_2	2.11\|3642257\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642257-3642286	30	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	284081-284110	9	0.7
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NC_017588	Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence	26776-26805	9	0.7
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	MH697592	Mycobacterium phage Rando14, complete genome	59751-59780	9	0.7
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	KM363596	Mycobacteriophage Omnicron, complete genome	61337-61366	9	0.7
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	198079-198108	9	0.7
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_LR027520	Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence	102229-102258	9	0.7
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	LR743523	Xylella phage Usme genome assembly, chromosome: 1	38539-38568	9	0.7
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	MT708545	Rhizobium phage Pasto, complete genome	8494-8523	9	0.7
NZ_CP016440_2	2.15\|3642521\|30\|NZ_CP016440\|PILER-CR,CRISPRCasFinder,CRT	3642521-3642550	30	NZ_CP012701	Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge plasmid 1, complete sequence	31928-31957	10	0.667
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	LR743529	Xanthomonas phage Sopo genome assembly, chromosome: 1	38448-38477	10	0.667
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	LR743528	Xanthomonas phage Tabio genome assembly, chromosome: 1	38045-38074	10	0.667
NZ_CP016440_2	2.20\|3642851\|30\|NZ_CP016440\|CRISPRCasFinder,CRT	3642851-3642880	30	LR743531	Xanthomonas phage Tenjo genome assembly, chromosome: 1	38404-38433	10	0.667

1. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NZ_CP013125 (Pseudomonas mendocina S5.2 plasmid pPME5, complete sequence) position: , mismatch: 4, identity: 0.867

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
attacgcgggttcgattcccgccgcccgct	Protospacer
 .*************.****** *******

2. spacer 2.2|3641665|29|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MH617757 (Microviridae sp. isolate ctbb740, complete genome) position: , mismatch: 5, identity: 0.828

gcggtggttctgcgccgattaacattaat	CRISPR spacer
gtggtggttcttcgccgattaacgtcact	Protospacer
*.********* ***********.*.* *

3. spacer 2.9|3642125|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 6, identity: 0.8

ggtcgtcacgccttcccgaccgccgctgtc	CRISPR spacer
ggcggcgacgccttcccgaccgccgaggtc	Protospacer
**. *. ******************  ***

4. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MK416013 (Klebsiella phage ST16-OXA48phi5.1, complete genome) position: , mismatch: 6, identity: 0.8

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
aggcgattttcagctgtcagtcccgcacct	Protospacer
**  *  ************ *****.****

5. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
aggcgattttcagctgtcagtcccgcacct	Protospacer
**  *  ************ *****.****

6. spacer 2.19|3642785|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028969 (Aminobacter sp. MSH1 plasmid pUSP1, complete sequence) position: , mismatch: 6, identity: 0.8

tcagatg--cactgctacatccgccagtccga	CRISPR spacer
--agccggccacttctacatcagccagtccga	Protospacer
  ** .*  **** ******* **********

7. spacer 2.19|3642785|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026266 (Aminobacter sp. MSH1 plasmid pAM01, complete sequence) position: , mismatch: 6, identity: 0.8

tcagatg--cactgctacatccgccagtccga	CRISPR spacer
--agccggccacttctacatcagccagtccga	Protospacer
  ** .*  **** ******* **********

8. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to LN997803 (Escherichia coli phage phi467) position: , mismatch: 6, identity: 0.8

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
atgatgcgggttcgattcccgctgcccgct	Protospacer
 . *.**********.****** *******

9. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NZ_CP049914 (Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
atgatgcgggttcgattcccgctgcccgct	Protospacer
 . *.**********.****** *******

10. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NZ_LN868946 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence) position: , mismatch: 6, identity: 0.8

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
atgatgcgggttcgattcccgctgcccgct	Protospacer
 . *.**********.****** *******

11. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 6, identity: 0.8

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
atgatgcgggttcgattcccgctgcccgct	Protospacer
 . *.**********.****** *******

12. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to KC292023 (Halovirus HRTV-4, complete genome) position: , mismatch: 6, identity: 0.8

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
agtacgcgggttcgactcccgcggcgggcg	Protospacer
  ********************.**  **

13. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK867354 (Synechococcus phage S-SCSM1, complete genome) position: , mismatch: 6, identity: 0.8

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
cagtcacgggttcgactcccgttgcccgct	Protospacer
*   *.***************. *******

14. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to KY945355 (Mycobacterium phage Shandong1, complete genome) position: , mismatch: 6, identity: 0.8

cctacgcg-ggttcgactcccgcagcccgct	CRISPR spacer
-cgataagcggttcgtctcccgcagcccgct	Protospacer
 * *.. * ****** ***************

15. spacer 2.1|3641599|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013633 (Rhizobium sp. N324 plasmid pRspN324c, complete sequence) position: , mismatch: 7, identity: 0.767

atgtttatcgtgatcacgattttgtcgtgg	CRISPR spacer
tgttttatcgcgatcacgattttgtggctg	Protospacer
   *******.************** *. *

16. spacer 2.1|3641599|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MN693765 (Marine virus AFVG_250M576, complete genome) position: , mismatch: 7, identity: 0.767

atgtttatcgtgatcacgattttgtcgtgg	CRISPR spacer
acataaacagtgatcacgattttatcgtgg	Protospacer
*..*  *. **************.******

17. spacer 2.6|3641928|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

aagtcgaagtacagcatgttgagggactag	CRISPR spacer
tcgtcgaagtacagcatggtgaaggcgtcg	Protospacer
  **************** ***.**  * *

18. spacer 2.7|3641994|29|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014803 (Rhodovulum sulfidophilum plasmid Plasmid3 DNA, complete genome, strain: DSM 2351) position: , mismatch: 7, identity: 0.759

gtatgccgtattcgatgcgcccccagcag	CRISPR spacer
tcatgccgtcttcgatgcgcccccccgcg	Protospacer
 .******* **************    *

19. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to LR134277 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggcgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

20. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggcgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

21. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MK416022 (Klebsiella phage ST846-OXA48phi9.2, complete genome) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggtgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

22. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MF695815 (Klebsiella phage KPP5665-2, complete genome) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggtgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

23. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggcgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

24. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MK416008 (Klebsiella phage ST405-OXA48phi1.3, complete genome) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggtgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

25. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to KY271399 (Klebsiella phage 5 LV-2017, complete genome) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggtgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

26. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to LR134279 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 4) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggcgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

27. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046951 (Klebsiella pneumoniae strain BD_DM_914 plasmid punnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggtgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

28. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046941 (Klebsiella pneumoniae strain BD_DM_697 plasmid punnamed2) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggtgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

29. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046383 (Klebsiella pneumoniae strain BD_DM_782 plasmid punnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggtgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

30. spacer 2.10|3642191|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MK448234 (Klebsiella phage ST11-VIM1phi8.2, complete genome) position: , mismatch: 7, identity: 0.767

agtggcgtttcagctgtcattcccgtacct	CRISPR spacer
gggtgattttcagctgtcagtcccgcacct	Protospacer
.*  *  ************ *****.****

31. spacer 2.11|3642257|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.767

atcagtcgcatgaagctgccgccgtactga	CRISPR spacer
atcagccgcacgaagctgccgccgatgagt	Protospacer
*****.****.*************    *

32. spacer 2.11|3642257|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NC_010811 (Ralstonia phage RSL1, complete genome) position: , mismatch: 7, identity: 0.767

atcagtcgcatgaagctgccgccgtactga--	CRISPR spacer
gcaagtggcatgaagctgccgccg--ctggct	Protospacer
.. *** *****************  ***.

33. spacer 2.11|3642257|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to AB366653 (Ralstonia phage RSL1 DNA, complete genome) position: , mismatch: 7, identity: 0.767

atcagtcgcatgaagctgccgccgtactga--	CRISPR spacer
gcaagtggcatgaagctgccgccg--ctggct	Protospacer
.. *** *****************  ***.

34. spacer 2.11|3642257|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016619 (Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

atcagtcgcatgaagctgccgccgtactga	CRISPR spacer
aaccagcgcacgaagctggcgccgtactgg	Protospacer
* * . ****.******* **********.

35. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018851 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

36. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018468 (Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

37. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018472 (Xanthomonas perforans strain LH3 plasmid pLH3.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

38. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023286 (Xanthomonas citri pv. citri strain 03-1638-1-1 plasmid pCuR, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

39. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018859 (Xanthomonas citri pv. citri strain LH201 plasmid pLH201.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

40. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018848 (Xanthomonas citri pv. citri strain LL074-4 plasmid pLL074-4.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

41. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018855 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

42. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018729 (Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

43. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018726 (Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

44. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018732 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
actcccgtcattgacgtgccggcgccgcca	Protospacer
 . ******** ****** ********.*.

45. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NC_048791 (Corynebacterium phage Adelaide, complete genome) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
tccgacgccatggacgtgccggcgccgtct	Protospacer
*.   **.********** **********

46. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
cagcccgtcatgggcgtgacgtcgcgcgcg	Protospacer
. ***********.******* ***   **

47. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 7, identity: 0.767

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
atcgccgtcatgggcgtgacggtgccggcc	Protospacer
 *  *********.********.**** *

48. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_022995 (Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gcattgcgggttcgactcccgcagaccgga	Protospacer
 *  .******************* ***

49. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359314 (Mycobacterium phage Ewok, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

50. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359337 (Mycobacterium phage Flabslab, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

51. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MN234193 (Mycobacterium phage Kboogie, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

52. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK450432 (Mycobacterium phage ValleyTerrace, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

53. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MH779502 (Mycobacterium phage FudgeTart, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

54. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359365 (Mycobacterium phage Loanshark, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

55. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359364 (Mycobacterium phage ChickenPhender, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

56. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MH697586 (Mycobacterium phage InigoMontoya, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

57. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK112541 (Mycobacterium phage Jessibeth14, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

58. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359347 (Mycobacterium phage Ading, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

59. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK450425 (Mycobacterium phage Shelob, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

60. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_023714 (Mycobacterium phage LinStu, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

61. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359339 (Mycobacterium phage Naija, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

62. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to KT321476 (Mycobacterium phage Zeenon, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

63. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MN428065 (Mycobacterium phage Cactojaque, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

64. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to JN699625 (Mycobacterium phage Wally, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

65. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to KX721255 (Mycobacterium phage Yucca, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

66. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359366 (Mycobacterium phage Basquiat, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

67. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359346 (Mycobacterium phage NoodleTree, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

68. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359361 (Mycobacterium phage Darko, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

69. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MH779498 (Mycobacterium phage Bread, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

70. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MG812494 (Mycobacterium phage Pier, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

71. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MT818423 (Mycobacterium phage Janiyra, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

72. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359328 (Mycobacterium phage EmmaElysia, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

73. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359335 (Mycobacterium phage Patter, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

74. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MT889395 (Mycobacterium phage Shifa, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

75. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to EU826467 (Mycobacterium phage Rizal, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

76. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MT723944 (Mycobacterium phage ChaylaJr, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

77. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to KR080196 (Mycobacterium phage Momo, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

78. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359318 (Mycobacterium phage Specks, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

79. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK112548 (Mycobacterium phage McWolfish, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

80. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359338 (Mycobacterium phage Amataga, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

81. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MT723945 (Mycobacterium phage Quasimodo, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

82. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK112533 (Mycobacterium phage Bonray, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

83. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK450422 (Mycobacterium phage RoMag, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

84. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359327 (Mycobacterium phage EmToTheThree, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

85. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359336 (Mycobacterium phage Chargie21, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

86. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_023696 (Mycobacterium phage Dandelion, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

87. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MN276192 (Mycobacterium phage Trinitium, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

88. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359349 (Mycobacterium phage FoxtrotP1, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

89. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to JF704096 (Mycobacterium phage Ghost, complete sequence) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

90. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359344 (Mycobacterium phage Napoleon13, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

91. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MH727558 (Mycobacterium phage Salacia, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

92. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359363 (Mycobacterium phage Fludd, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

93. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359329 (Mycobacterium phage Kamryn, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

94. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MN183280 (Mycobacteriophage LolaVinca, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

95. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359321 (Mycobacterium phage Phusco, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

96. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359362 (Mycobacterium phage Atlantean, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

97. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK310143 (Mycobacterium phage Dietrick, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

98. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MH051266 (Mycobacterium phage MikeLiesIn, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

99. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MH669008 (Mycobacterium phage Megamind, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

100. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK878897 (Mycobacterium phage Blackbrain, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

101. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MT818416 (Mycobacterium phage BackyardAgain, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

102. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_028869 (Mycobacterium phage HyRo, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

103. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to KT365400 (Mycobacterium phage ErnieJ, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

104. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359353 (Mycobacterium phage BadAgartude, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

105. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MH697590 (Mycobacterium phage Phlegm, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

106. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359317 (Mycobacterium phage FrayBell, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

107. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MN428066 (Mycobacterium phage JPickles, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

108. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to DQ398053 (Mycobacteriophage Catera, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

109. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK450424 (Mycobacterium phage Melpomini, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

110. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK450423 (Mycobacterium phage Stubby, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

111. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MF919493 (Mycobacterium phage Audrick, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

112. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_008207 (Mycobacterium phage Catera, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

113. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK359326 (Mycobacterium phage Pivoine, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gactcgcgggttcgactcccgcatctcgca	Protospacer
  . ******************* *.***

114. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
cgattgcgggttcgactcccgccgcccaat	Protospacer
*   .***************** ****. *

115. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
cgattgcgggttcgactcccgccgcccatt	Protospacer
*   .***************** ****..*

116. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
cgattgcgggttcgactcccgccgcccaat	Protospacer
*   .***************** ****. *

117. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
cgattgcgggttcgactcccgccgcccatt	Protospacer
*   .***************** ****..*

118. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
cgattgcgggttcgactcccgccgcccatt	Protospacer
*   .***************** ****..*

119. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NC_008195 (Mycobacterium phage Cooper, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
ggcaagcgggttcgactcccgccgctcggt	Protospacer
  .* ***************** **.** *

120. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to KY979132 (Acidovorax phage ACP17, complete genome) position: , mismatch: 7, identity: 0.767

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
ccgacgcgggttcgagtcccgcacgctctt	Protospacer
** ************ *******  *. .*

121. spacer 1.1|237207|30|NZ_CP016440|CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

ttccagcgaaccccaggcgtcgttggccag	CRISPR spacer
cttgcccgagccccaggggtcgttggccat	Protospacer
.*.   ***.******* ***********

122. spacer 2.9|3642125|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 8, identity: 0.733

ggtcgtcacgccttcccgaccgccgctgtc	CRISPR spacer
ttttccgaagccttcccgaccgccgatgtc	Protospacer
  *. . * **************** ****

123. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 8, identity: 0.733

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
ctgaccttcatggacgtgacggcgctcgta	Protospacer
.** ** ******************.  ..

124. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to NZ_CP032328 (Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence) position: , mismatch: 8, identity: 0.733

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
aggtcgcgggttcgactcccgccgccgccc	Protospacer
    ****************** ***  *.

125. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MK620899 (Gordonia phage GodonK, complete genome) position: , mismatch: 8, identity: 0.733

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
tttaggcgggttcgactcccgcaccggcgt	Protospacer
..** ****************** *    *

126. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MN096369 (Gordonia phage Phendrix, complete genome) position: , mismatch: 8, identity: 0.733

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
tttaggcgggttcgactcccgcaccggcgt	Protospacer
..** ****************** *    *

127. spacer 2.5|3641862|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029986 (Sphingomonas sp. FARSPH plasmid p01, complete sequence) position: , mismatch: 9, identity: 0.7

cgcatcgacggaccgcagatcagatcatcg	CRISPR spacer
gtgatcgacgaaccgcagatcaaatcggtc	Protospacer
   *******.***********.***. .

128. spacer 2.6|3641928|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU356480 (Vibrio parahaemolyticus strain VPS92 plasmid pVPS92-VEB, complete sequence) position: , mismatch: 9, identity: 0.7

aagtcgaagtacagcatgttgagggactag	CRISPR spacer
tgctcgaagtacatcacgttgagggatgta	Protospacer
 . ********** **.*********.  .

129. spacer 2.6|3641928|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053812 (Vibrio cholerae strain W6G plasmid pW6G, complete sequence) position: , mismatch: 9, identity: 0.7

aagtcgaagtacagcatgttgagggactag	CRISPR spacer
tgctcgaagtacatcacgttgagggatgta	Protospacer
 . ********** **.*********.  .

130. spacer 2.6|3641928|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053815 (Vibrio cholerae strain W7G plasmid pW7G, complete sequence) position: , mismatch: 9, identity: 0.7

aagtcgaagtacagcatgttgagggactag	CRISPR spacer
tgctcgaagtacatcacgttgagggatgta	Protospacer
 . ********** **.*********.  .

131. spacer 2.9|3642125|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to KF986246 (Mycobacterium phage MichelleMyBell, complete genome) position: , mismatch: 9, identity: 0.7

ggtcgtcacgccttcccgaccgccgctgtc	CRISPR spacer
cactcccacgccttcccgatcgccgctagc	Protospacer
 ... .*************.*******. *

132. spacer 2.11|3642257|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 9, identity: 0.7

atcagtcgcatgaagctgccgccgtactga	CRISPR spacer
cgcagtcgcatgcacctgccgccgtcggag	Protospacer
  ********** * **********   ..

133. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NC_017588 (Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence) position: , mismatch: 9, identity: 0.7

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
gccatggtcctggacgtgacggcgccgggg	Protospacer
 .  . *** *****************  *

134. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to MH697592 (Mycobacterium phage Rando14, complete genome) position: , mismatch: 9, identity: 0.7

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
cgcgccgtgatgaacgtgacggcgccggac	Protospacer
.   **** ***.**************

135. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to KM363596 (Mycobacteriophage Omnicron, complete genome) position: , mismatch: 9, identity: 0.7

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
cgcgccgtgatgaacgtgacggcgccggac	Protospacer
.   **** ***.**************

136. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 9, identity: 0.7

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
gccatggtcctggacgtgacggcgccgggg	Protospacer
 .  . *** *****************  *

137. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 9, identity: 0.7

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
gccatggtcctggacgtgacggcgccgggg	Protospacer
 .  . *** *****************  *

138. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to LR743523 (Xylella phage Usme genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.7

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gggtcgcgggttcgactcccgcagcggttc	Protospacer
    *********************   ..

139. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to MT708545 (Rhizobium phage Pasto, complete genome) position: , mismatch: 9, identity: 0.7

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
agcgtgcgggttcgagtcccgccgcccgta	Protospacer
  ...********** ****** *****.

140. spacer 2.15|3642521|30|NZ_CP016440|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012701 (Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.667

ttgcccgtcatggacgtgacggcgccgtcg	CRISPR spacer
gcaagcgtcatggacgtgatggcgccagta	Protospacer
 ..  **************.******. ..

141. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to LR743529 (Xanthomonas phage Sopo genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.667

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gggtcgcgggttcgactcccgccgcggttc	Protospacer
    ****************** **   ..

142. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to LR743528 (Xanthomonas phage Tabio genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.667

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
gggtcgcgggttcgactcccgccgcggttc	Protospacer
    ****************** **   ..

143. spacer 2.20|3642851|30|NZ_CP016440|CRISPRCasFinder,CRT matches to LR743531 (Xanthomonas phage Tenjo genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.667

cctacgcgggttcgactcccgcagcccgct	CRISPR spacer
tggtcgcgggttcgactcccgccgcggttc	Protospacer
.   ****************** **   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1775473 : 1857379

Pseudomonas_phage(19.51%)

tRNA,tail,integrase,capsid,plate,transposase,holin

attL 1818690:1818711|attR 1863634:1863655

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043207777.1\|1775473_1777891_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_043207778.1\|1777905_1778244_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.6e-13	43.3
WP_043207779.1\|1778301_1778700_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_053073215.1\|1778877_1779996_-	hypothetical protein	NA	NA	NA	NA
WP_109842432.1\|1780576_1780732_+	hypothetical protein	NA	NA	NA	NA
WP_109842433.1\|1780915_1781815_+	DNA/RNA non-specific endonuclease	H6X497	Enterobacteria_phage	2.0e-21	32.6
WP_043207781.1\|1781839_1783801_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	8.9e-27	29.4
WP_043207783.1\|1783929_1784436_+	N-acetyltransferase	NA	NA	NA	NA
WP_043207785.1\|1784442_1784685_-	hypothetical protein	NA	NA	NA	NA
WP_043207787.1\|1784813_1785092_-	hypothetical protein	NA	NA	NA	NA
WP_043207789.1\|1785184_1785637_+	low affinity iron permease family protein	NA	NA	NA	NA
WP_029579565.1\|1785633_1786104_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_043207791.1\|1786358_1786952_+	twin-arginine translocation pathway signal	NA	NA	NA	NA
WP_043207793.1\|1786999_1787284_+	CsbD family protein	NA	NA	NA	NA
WP_029579562.1\|1787341_1787524_-	hypothetical protein	NA	NA	NA	NA
WP_043207794.1\|1788175_1788388_+	hypothetical protein	NA	NA	NA	NA
WP_029579560.1\|1788536_1788749_+	hypothetical protein	NA	NA	NA	NA
WP_043207796.1\|1788875_1789952_+	N-acylglucosamine 2-epimerase	NA	NA	NA	NA
WP_043207798.1\|1790041_1790257_+	hypothetical protein	NA	NA	NA	NA
WP_043207891.1\|1790330_1790636_+	hypothetical protein	NA	NA	NA	NA
WP_043207800.1\|1790643_1791009_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_043207801.1\|1791061_1792864_-	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	6.2e-43	27.4
WP_043207802.1\|1792991_1793816_+	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	7.0e-66	47.8
WP_043207804.1\|1793819_1794806_+	aldo/keto reductase	NA	NA	NA	NA
WP_043207805.1\|1794822_1795017_-	hypothetical protein	NA	NA	NA	NA
WP_043207806.1\|1795013_1796189_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_043207893.1\|1796362_1797019_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.0e-56	49.5
WP_043207807.1\|1797013_1799545_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_043207895.1\|1799704_1801618_-	S9 family peptidase	NA	NA	NA	NA
WP_043207808.1\|1801753_1802200_+	hypothetical protein	NA	NA	NA	NA
WP_043207809.1\|1802215_1802644_-	PaaI family thioesterase	NA	NA	NA	NA
WP_043207810.1\|1802809_1803892_+	DNA polymerase IV	NA	NA	NA	NA
WP_043207813.1\|1803903_1804365_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	8.8e-18	44.9
WP_043207815.1\|1804502_1805729_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_043207818.1\|1805751_1806195_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_043207821.1\|1806291_1807533_+	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_043207824.1\|1807542_1808376_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_043207825.1\|1808372_1809338_-	NAD-binding protein	NA	NA	NA	NA
WP_043207827.1\|1809448_1810363_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_043207830.1\|1810369_1811038_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_043207897.1\|1811034_1812771_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_043207832.1\|1812984_1813977_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_043207834.1\|1814224_1814902_+	hypothetical protein	NA	NA	NA	NA
WP_043207835.1\|1814872_1815769_-	DMT family transporter	NA	NA	NA	NA
WP_048026460.1\|1815836_1817300_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_043207838.1\|1817750_1818536_-	exodeoxyribonuclease III	NA	NA	NA	NA
WP_043207840.1\|1818683_1820957_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	6.7e-127	43.3
1818690:1818711	attL	NA	NA	NA	NA
WP_043207843.1\|1821063_1821498_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_043207845.1\|1821665_1822667_+\|integrase	site-specific integrase	A0A2H4JE37	uncultured_Caudovirales_phage	5.2e-23	31.7
WP_043207900.1\|1822669_1823461_-	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	1.0e-122	76.5
WP_043207847.1\|1823636_1823990_-	hypothetical protein	NA	NA	NA	NA
WP_048026442.1\|1824231_1825041_-	hypothetical protein	NA	NA	NA	NA
WP_043208305.1\|1825037_1825616_-	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	4.8e-29	36.0
WP_043208306.1\|1825612_1826680_-\|plate	baseplate J/gp47 family protein	A0A0M3LQN4	Mannheimia_phage	2.4e-79	46.8
WP_043208308.1\|1826679_1827030_-	phage GP46 family protein	A0A2H4JDR8	uncultured_Caudovirales_phage	6.2e-32	64.3
WP_043208310.1\|1827095_1827737_-\|plate	phage baseplate assembly protein	F6MIL4	Haemophilus_phage	1.9e-39	45.6
WP_043208313.1\|1827726_1828830_-\|tail	tail protein	A0A2H4J9E6	uncultured_Caudovirales_phage	5.7e-71	42.1
WP_043208315.1\|1828813_1830073_-	hypothetical protein	A0A2H4JGT4	uncultured_Caudovirales_phage	1.4e-54	34.6
WP_043208316.1\|1830072_1832277_-	hypothetical protein	A0A0M3LPB6	Mannheimia_phage	2.1e-85	42.3
WP_043208318.1\|1832420_1832813_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_043208320.1\|1832809_1833184_-	hypothetical protein	A0A2H4J9F8	uncultured_Caudovirales_phage	1.9e-18	40.7
WP_043208323.1\|1833199_1834627_-\|tail	tail sheath protein	A0A2H4JFT7	uncultured_Caudovirales_phage	1.6e-73	40.0
WP_010926885.1\|1834632_1834815_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_043208326.1\|1834814_1835510_-	DUF1834 family protein	NA	NA	NA	NA
WP_043208478.1\|1835506_1835935_-	DUF1320 domain-containing protein	A0A2D1GNP0	Pseudomonas_phage	6.7e-12	33.8
WP_043208328.1\|1836035_1836311_-	hypothetical protein	NA	NA	NA	NA
WP_033841489.1\|1836382_1837330_-	hypothetical protein	G8GWE7	Rhodobacter_phage	2.2e-76	48.2
WP_048026448.1\|1837385_1837745_-	DUF2190 family protein	NA	NA	NA	NA
WP_054471552.1\|1837790_1838798_-	cell envelope integrity protein TolA	Q5ZQY0	Pseudomonas_phage	3.5e-35	53.5
WP_010926892.1\|1839032_1839590_-	hypothetical protein	A0A0M3LSP9	Mannheimia_phage	1.1e-09	33.5
WP_053073217.1\|1839728_1841069_-\|capsid	minor capsid protein	A0A0M4UTA3	Ralstonia_phage	1.3e-66	41.8
WP_048026450.1\|1841061_1842597_-	DUF935 family protein	Q5ZQY4	Pseudomonas_phage	3.5e-151	56.8
WP_043208330.1\|1842596_1844279_-	phage protein	A0A219VH72	Ochrobactrum_phage	2.0e-120	46.9
WP_043208332.1\|1844278_1844830_-	DUF3486 family protein	J9SH37	Pseudomonas_phage	1.2e-29	53.6
WP_043208334.1\|1844833_1845133_-	hypothetical protein	J9SNG3	Pseudomonas_phage	2.6e-23	61.2
WP_043208336.1\|1845143_1845440_-	DUF2730 family protein	NA	NA	NA	NA
WP_043208338.1\|1845551_1845959_-	hypothetical protein	NA	NA	NA	NA
WP_082149643.1\|1845955_1846591_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	1.7e-67	61.2
WP_043208339.1\|1846590_1846971_-	membrane protein	Q6QIC8	Burkholderia_phage	4.1e-29	62.8
WP_131726016.1\|1847064_1847403_-	hypothetical protein	NA	NA	NA	NA
WP_053073218.1\|1847485_1848097_-	hypothetical protein	NA	NA	NA	NA
WP_043208341.1\|1848099_1848540_-	helix-turn-helix transcriptional regulator	Q6QID2	Burkholderia_phage	4.8e-21	44.1
WP_033841483.1\|1848641_1848866_+	DNA-binding protein	NA	NA	NA	NA
WP_043208343.1\|1849026_1849500_+	hypothetical protein	Q6QID6	Burkholderia_phage	3.9e-45	53.5
WP_043208345.1\|1849496_1849802_+	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	4.3e-21	52.5
WP_043208347.1\|1849820_1850714_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	6.6e-70	54.7
WP_054471551.1\|1850716_1852492_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	2.7e-176	53.0
WP_043208352.1\|1852502_1853687_+	AAA family ATPase	Q6QIE1	Burkholderia_phage	1.1e-99	51.2
WP_053073219.1\|1853677_1853998_+	hypothetical protein	NA	NA	NA	NA
WP_043208355.1\|1853991_1854207_+	hypothetical protein	NA	NA	NA	NA
WP_043208358.1\|1854206_1854809_+	hypothetical protein	A0A0M5MXL4	Ralstonia_phage	8.2e-48	54.3
WP_043208360.1\|1854805_1855426_+	DUF3164 family protein	Q6QIE4	Burkholderia_phage	3.0e-61	57.2
WP_043208362.1\|1855545_1855827_+	HU family DNA-binding protein	G8GWC6	Rhodobacter_phage	2.4e-10	39.1
WP_053073220.1\|1855922_1856288_+	hypothetical protein	A0A218KCM7	Bacillus_phage	9.4e-07	46.7
WP_131726015.1\|1856367_1856784_+	hypothetical protein	NA	NA	NA	NA
WP_068945275.1\|1856788_1857379_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	4.0e-31	55.6
1863634:1863655	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2752111 : 2760234

Lake_Baikal_phage(28.57%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043208542.1\|2752111_2754547_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.2e-222	52.4
WP_043208545.1\|2754713_2756012_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.8e-130	54.5
WP_043208546.1\|2756116_2756770_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.2e-55	56.9
WP_043208547.1\|2756772_2758083_-	trigger factor	NA	NA	NA	NA
WP_043208548.1\|2758287_2758827_+	TIGR00645 family protein	K4K6D8	Caulobacter_phage	3.1e-22	33.5
WP_029580519.1\|2758880_2759087_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	7.4e-17	62.1
WP_043208550.1\|2759350_2759902_-	DUF924 family protein	A0A1V0SIY0	Klosneuvirus	7.1e-14	30.6
WP_005014599.1\|2760030_2760234_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.6e-18	66.7

DBSCAN-SWA_3

3468444 : 3480569

Burkholderia_phage(41.67%)

integrase

attL 3462833:3462846|attR 3487283:3487296

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3462833:3462846	attL	NA	NA	NA	NA
WP_043214226.1\|3468444_3468864_-	M15 family metallopeptidase	A0A2I6PFM8	Proteus_phage	5.9e-29	50.0
WP_043214224.1\|3468972_3469995_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JE37	uncultured_Caudovirales_phage	2.2e-24	32.4
WP_043214222.1\|3469997_3470354_-	hypothetical protein	NA	NA	NA	NA
WP_146027869.1\|3470698_3470914_+	hypothetical protein	NA	NA	NA	NA
WP_083218090.1\|3470904_3471861_-	hypothetical protein	A0A0A8J8U5	Ralstonia_phage	7.2e-30	39.4
WP_043207544.1\|3471861_3472509_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	3.2e-42	44.9
WP_043207542.1\|3472505_3473696_-	hypothetical protein	Q6IWQ3	Burkholderia_phage	7.7e-66	41.0
WP_043207540.1\|3473688_3474033_-	hypothetical protein	NA	NA	NA	NA
WP_043207539.1\|3474029_3474716_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	6.5e-33	37.2
WP_043207535.1\|3474700_3475525_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	2.3e-40	39.3
WP_043207532.1\|3475517_3475826_-	hypothetical protein	Q6IWP9	Burkholderia_phage	5.0e-09	34.3
WP_048026478.1\|3475822_3476383_-	hypothetical protein	NA	NA	NA	NA
WP_043207531.1\|3476382_3477999_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	2.4e-22	31.4
WP_043207529.1\|3478089_3478545_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.8e-23	50.0
WP_043207528.1\|3478554_3479004_-	hypothetical protein	I7ATP4	Escherichia_phage	5.2e-31	45.9
WP_043207526.1\|3479060_3480569_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.2e-71	35.6
3487283:3487296	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016440

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection