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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010884 Vibrio parahaemolyticus strain CHN25 chromosome 2, complete sequence 1 crisprs DEDDh,RT,WYL,csa3,cas3 0 0 1 0
NZ_CP010886 Vibrio parahaemolyticus strain CHN25 plasmid P2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP010885 Vibrio parahaemolyticus strain CHN25 plasmid P1, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP010883 Vibrio parahaemolyticus strain CHN25 chromosome 1, complete sequence 0 crisprs cas3,DinG,csa3,csx1,DEDDh,WYL 0 0 5 0
NZ_CP010887 Vibrio parahaemolyticus strain CHN25 plasmid P3, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP010884
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010884_1 68769-68866 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 935059 : 943260 14 Vibrio_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP010885
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 76708 : 82627 7 Vibrio_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP010883
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 740638 : 747340 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 804961 : 846755 59 Vibrio_phage(91.11%) plate,tRNA,tail,head NA
DBSCAN-SWA_3 1130783 : 1214557 83 Vibrio_phage(70.45%) head,terminase,integrase,capsid,protease,tRNA,portal,tail attL 1130628:1130650|attR 1166509:1166531
DBSCAN-SWA_4 1731651 : 1816821 90 Vibrio_phage(33.33%) head,terminase,integrase,capsid,portal,tRNA,protease,tail attL 1743570:1743586|attR 1760305:1760321
DBSCAN-SWA_5 2837028 : 2854202 15 uncultured_Mediterranean_phage(18.18%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage