CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP012375	Microcystis aeruginosa NIES-2481 chromosome, complete genome	25 crisprs	cas14j,c2c9_V-U4,Cas14c_CAS-V-F,cas14k,csa3,RT,2OG_CAS,DinG,csm3gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cas2,cas1,cas4,cas6,cas3,cas5,cas7,cas8b5,WYL	1	33	6	0
NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	6 crisprs	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL,cas1,cas2,RT,cas14j,c2c8_V-U2,c2c9_V-U4,Cas14c_CAS-V-F,cas3	0	123	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP012375_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_1

455423-455536

TypeV

Consensus_repeat	Method
AATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTT	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of NZ_CP012375_1

>merge|NZ_CP012375|1|455423-455536|CRISPRCasFinder
AATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTTGATTCATGAATCAACCCTACAAAGTATTAATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTT

>NZ_CP012375|1|1|455423-455536|CRISPRCasFinder
AATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTT	GATTCATGAATCAACCCTACAAAGTATT
AATCTCTAATAGGGGTTAAGATTAATGGGAACGCTGTAGGGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046660793.1\|458929_460144_-\|transposase	cas14j	-	gnl\|CDD\|223747
NZ_CP012375.1\|WP_066030226.1\|468593_469781_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|279444
NZ_CP012375.1\|WP_046660796.1\|465044_466283_+\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|272970
NZ_CP012375.1\|WP_046660785.1\|448398_450711_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|226581
NZ_CP012375.1\|WP_002744497.1\|463773_464853_+\|fructose-bisphosphate-aldolase-class-II	unknown	unknown	gnl\|CDD\|181691
NZ_CP012375.1\|WP_046660789.1\|453532_454906_-\|TIGR03279-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|132322
NZ_CP012375.1\|WP_045359780.1\|447917_448190_+\|BrnT-family-toxin	unknown	unknown	gnl\|CDD\|367913
NZ_CP012375.1\|WP_046660798.1\|469852_470797_-\|isoaspartyl-peptidase	unknown	unknown	gnl\|CDD\|271340
NZ_CP012375.1\|WP_016515715.1\|448170_448395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046660790.1\|455011_455344_-\|DUF4164-family-protein	unknown	unknown	gnl\|CDD\|372702
NZ_CP012375.1\|WP_046660786.1\|450792_451203_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319925
NZ_CP012375.1\|WP_046660794.1\|460583_462059_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP012375.1\|WP_046660787.1\|451169_452354_-\|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_CP012375.1\|WP_046660792.1\|457609_458794_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012375.1\|WP_046660788.1\|452540_453335_+\|MlaE-family-lipid-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|215575
NZ_CP012375.1\|WP_046660795.1\|462513_463641_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|224370
NZ_CP012375.1\|WP_046660797.1\|466715_468020_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380569
NZ_CP012375.1\|WP_046660783.1\|446037_447003_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP012375.1\|WP_046660791.1\|455654_457532_-\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl\|CDD\|273520
NZ_CP012375.1\|WP_046660784.1\|447237_447471_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046660793.1\|458929_460144_-\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.51424e-29
NZ_CP012375.1\|WP_066030226.1\|468593_469781_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|279444	pfam01098, FTSW_RODA_SPOVE, Cell cycle protein. This entry includes the following members; FtsW, RodA, SpoVE.	2.08473e-102
NZ_CP012375.1\|WP_046660796.1\|465044_466283_+\|PDZ-domain-containing-protein	gnl\|CDD\|272970	TIGR00225, Tail-specific_protease, C-terminal peptidase (prc). A C-terminal peptidase with different substrates in different species including processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein in E.coli E.coli and H influenza have the most distal branch of the tree and their proteins have an N-terminal 200 amino acids that show no homology to other proteins in the database. [Protein fate, Degradation of proteins, peptides, and glycopeptides, Protein fate, Protein modification and repair].	9.16946e-140
NZ_CP012375.1\|WP_046660785.1\|448398_450711_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|226581	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	2.70562e-106
NZ_CP012375.1\|WP_046660789.1\|453532_454906_-\|TIGR03279-family-radical-SAM-protein	gnl\|CDD\|132322	TIGR03279, cyano_FeS_chp, putative radical SAM enzyme, TIGR03279 family. Members of this protein family are predicted radical SAM enzymes of unknown function, apparently restricted to and universal across the Cyanobacteria. The high trusted cutoff score for this model, 700 bits, excludes homologs from other lineages. This exclusion seems justified because a significant number of sequence positions are simultaneously unique to and invariant across the Cyanobacteria, suggesting a specialized, conserved function, perhaps related to photosynthesis. A distantly related protein family, TIGR03278, in universal in and restricted to archaeal methanogens, and may be linked to methanogenesis.	0
NZ_CP012375.1\|WP_045359780.1\|447917_448190_+\|BrnT-family-toxin	gnl\|CDD\|367913	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system. BrnT is a ribonuclease toxin of a type II toxin-antitoxin system that exhibits a RelE-like fold. The antitoxin that neutralizes this toxin is pfam14384. BrnT is found in bacteria, archaea, bacteriophage, and plasmids. BrnT-BrnA forms a 2:2 tetrameric complex and autoregulates its own expression, which is induced by a number of different environmental stresses. Expression of BrnT alone results in cessation of bacterial growth which can be rescued after subsequent expression of BrnA.	7.52161e-27
NZ_CP012375.1\|WP_046660798.1\|469852_470797_-\|isoaspartyl-peptidase	gnl\|CDD\|271340	cd14949, Asparaginase_2_like_3, Uncharacterized bacterial subfamily of the L-Asparaginase type 2-like enzymes, an Ntn-hydrolase family. The wider family of Asparaginase 2-like enzymes includes Glycosylasparaginase, Taspase 1, and L-Asparaginase type 2. Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoprotein. Taspase1 catalyzes the cleavage of the Mix Lineage Leukemia (MLL) nuclear protein and transcription factor TFIIA. L-Asparaginase type 2 hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzymes of this family undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.	1.37619e-154
NZ_CP012375.1\|WP_002744497.1\|463773_464853_+\|fructose-bisphosphate-aldolase-class-II	gnl\|CDD\|181691	PRK09196, PRK09196, fructose-bisphosphate aldolase class II.	0
NZ_CP012375.1\|WP_046660790.1\|455011_455344_-\|DUF4164-family-protein	gnl\|CDD\|372702	pfam13747, DUF4164, Domain of unknown function (DUF4164). This is a family of short, approx 100 residue-long, bacterial proteins of unknown function. There is several conserved LE/LD sequence pairs.	1.09249e-07
NZ_CP012375.1\|WP_046660786.1\|450792_451203_+\|VOC-family-protein	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.43517e-37
NZ_CP012375.1\|WP_046660794.1\|460583_462059_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP012375.1\|WP_046660787.1\|451169_452354_-\|class-I-SAM-dependent-rRNA-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	4.87197e-118
NZ_CP012375.1\|WP_046660792.1\|457609_458794_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.93267e-22
NZ_CP012375.1\|WP_046660788.1\|452540_453335_+\|MlaE-family-lipid-ABC-transporter-permease-subunit	gnl\|CDD\|215575	PLN03100, PLN03100, Permease subunit of ER-derived-lipid transporter; Provisional.	5.39794e-107
NZ_CP012375.1\|WP_046660795.1\|462513_463641_+\|aldo/keto-reductase	gnl\|CDD\|224370	COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only].	4.88108e-142
NZ_CP012375.1\|WP_046660797.1\|466715_468020_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380569	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	7.99502e-112
NZ_CP012375.1\|WP_046660783.1\|446037_447003_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.3091e-41
NZ_CP012375.1\|WP_046660791.1\|455654_457532_-\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0

>NZ_CP012375.1|WP_046660790.1|455011_455344_-|DUF4164-family-protein
MANETVTYSLEAVLTRIEGKIDSLEKRIDERFDKVDERFDKIEERLTKVEIGQVELKGEIKALDQRLTTEIKGLTARVAYQEFTNRGILIALVVAILGGAAKLFGFFPNP
>NZ_CP012375.1|WP_046660789.1|453532_454906_-|TIGR03279-family-radical-SAM-protein
MSELTIRPAKISGVIPDSIAAEVGFEIGDSLVSINGNRPRDLIDYQFLCADEFLTLEVLDSQGKTHQVKIEKDYHEDLGLEFETALFDGLIQCNNKCPFCFIDQQPEGKRETLYYKDDDYRLSFLYGSYLTLTNLTSKEWQRIEKMRISPLFVSVHATEPDLRIRLLKNPRAGQILDHLKWLQARQLQIHAQVVVCPNINDGIHLERTLLDLVSFHRGDIPCVESIAVVPVGLTRFRPQEDELIPVSQEKAREVIEQVQTLQKKFRQEFGSNVVWLADEWFLIARVDLPPQSHYEDYPQIGNGVGSIRQFIRDFQKTAKKLLPAQISPSRRLIWVVGNAVEQAFQPLVKQLNKVQGLTVELVALNSDYWGQEITVTGLLTGQDILKGLQGKNLGDGVLLPSLMLKHGEAVFLDDLTLETVINQLGVPIYPVLGVEELIKTCLALNPFSDFLSHIGEQ
>NZ_CP012375.1|WP_046660788.1|452540_453335_+|MlaE-family-lipid-ABC-transporter-permease-subunit
MPRKSDAASGLSLWFQRLGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFIFFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDPIDYLVIPRVIACSLMLPLLTIISLVTGLLGGLFISDSLYGISYSLFLQSAQNFMETWDLISSMLKSLIFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQGTGNAEIG
>NZ_CP012375.1|WP_046660787.1|451169_452354_-|class-I-SAM-dependent-rRNA-methyltransferase
MPDLAKIILKNHKIDAVKRFHPWIFSGAIKEMEGEVKEGAIVEVYSDRGEYLATGLYNPSNIAVKILSFQKVSDIAQLFLEKFQNAYRLRQQIGLVDNPKTNCYRLINAEGDGLPSLIVDWYNGTAVIQAYSLALYQRLDLIVDCLKTIYADNLRAVYDKSAAVLAKSAHISENKYLFGQKTSDEVLESGHRFIIDWEKGQKTGFFLDQRENRALLSQYSHNKRVLNTFSYSGGFSVYAMQAGAALVDSVDSSHGAIDLTEKNIALNNLSQVPHQSYSADVFNFLRDCQEDYDLIVLDPPAFAKSIQSRHQAVMAYKRLNYQAFQKIRPQGIIFTFSCSQVVNEEHFQGAVMAAAIESARPVRILARLSQPADHPTSIYHSEGSYLKGLVLAVD
>NZ_CP012375.1|WP_046660786.1|450792_451203_+|VOC-family-protein
MNNPPDSPFNYTEAFIALGTSNFDRSVQFYRQLLQQEPSPYLAAVYAEFRLINLKLGLFCPKESHREEFGDSRGSGMSICFEVESLEKAIEHWSEIGYGARGEISQASHGSEIYIYDPDGNRLIFHQSTAKTNPFR
>NZ_CP012375.1|WP_046660785.1|448398_450711_+|DEAD/DEAH-box-helicase-family-protein
MNEAETRAELIDPALKAAGWGVIPDSKIRREVIAPGRLVGSGQRSSSKTCDYVLVYRGHKLATLEAKKRDAHPTEGLGQAKDYAERLQTPFALCTNGLRIYRVDTRAGKEGYIDRYPTQEELWAATYPDSNHWRDRFATVPPDNKSGMRESRYYQHNAIQAVLEAIAAGQKRMLLTMATGTGKTTIALQIAWKLFHSSWNLSGEPTHRPCILFLTDRNILANQALTEFTAFPEDALVRIEPKNIQKTKKVPKNGSVFFSIFQTFMTQNGEELAPNFLEYAPDFFDLVIVDECHRGGANDESTWRKILEYFAPAVQLGLTATPKRDLNGDTYKYFGEPLYTYSLKEGINEGYLTPFKVVEFTTSLDEYQYDPDDELIEGDIDENKVYTESDFNRIIEIEERERQRVKIFMEAIDQNEKTLVFCANQDHALAIRDLINQMAISSDPNYCARVTANDGSLGETHLKKFQDNEKRLPTILTTSRKLSTGVDARNLRNIVLLRPVKSMIEFKQIIGRGTRLFDNKDYFTIYDFVKAHENFNDPEWDGEPQEPVVIDPRPRPEPPDAIEDPLDEPDPLPIRQKIKIKLADGKERELEHTQRTTFWNADGKPISAEEFIQQLFGDIPDLFQDEAELRHLWGRPDTRKSLLTGLAEKGYGEEQLQAIARITNTENSDIYDVLTYIAYAARPLTREERVIKHKDLIFSKYTRKQREFLDFILDQYIRSGVGELDREKLPKLIEIKYHTINEAISQLGEIQEISGVFMSFHAYLYWSDAA
>NZ_CP012375.1|WP_016515715.1|448170_448395_+|hypothetical-protein
MKAEEFDAKFDAGEDMSEFLDFSTARRPNREKQKIELDLPFWIIRKLEAEAQKEGVSTQTFLENYLARHIASAP
>NZ_CP012375.1|WP_045359780.1|447917_448190_+|BrnT-family-toxin
MPSFEYDENKSKTNQQKHGIDFIEAQKLWEDDNLLEITGKSETEPRYLIIGQVQDKHWTAVITYRSEMIRIISVRRSRTNEVTWYESRRI
>NZ_CP012375.1|WP_046660784.1|447237_447471_+|hypothetical-protein
MIIQKIIDELHEIPEDHLSQIYEIVRSFRLELERERSHNPDDTPDEEIVANLKQGMQEALGGNTIPLDRMWEGIDVD
>NZ_CP012375.1|WP_046660783.1|446037_447003_+|IS630-family-transposase
MKPYSLDLRQKIIETYEENNLSQRELAKRFRVALSFIQKLIKQWRETGNLNPRPHGGGQKLKLKSDEIILLGDLVQEKKDATLDELRKQIEEKTQTVVSNSTISRILKRLNLTQKKSLHARERDTERVQKLREEYWEKIRDVRAEDLVFVDESGSNLGMTRLYGRAEKGQRVYDSVPLNRGKNVTIIGAIALKGLLAFINVFGAANGLIFEAFIATLLVPNLWKGACVLMDNASIHQKETLEPILQEVGARLEFLPPYSPDFSPIENCWSKVKILIRSMSPRTYADLEKAIVQAFSQITLRDIHHWFTHCCYCDTPFKEPT
>NZ_CP012375.1|WP_046660791.1|455654_457532_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MSIKSKPPSQSRLIGNVLLAVGGLFLIVNLLFPQLFGPSVPKVPYSLFIDQVEDGNVARVSVGQNEIRYQLKNDQEGNYGRIFSTTPIFDLELPKRLEAKGVEFAAAPPPKNGWIGSVLSWVIPPLIFVGIWQFFLARSGGGGPAGALSITKSRAKVYVEGDTTKTTFEDVAGVEEAKTELAEIVEFLKYPQRYIQIGARIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVELFVGAGAARVRDLFEQAKKKAPCIIFIDELDAIGKSRANGNFMGGNDEREQTLNQLLTEMDGFNAGDATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAGKVKLGSDVDLKQIATRTPGFAGADLANLVNEAALLAARNQRSTVAQEDFNEAIERVVAGLEKKSRVLSEKEKKIVAYHEVGHALVGAVMPGGGKVAKISIVPRGMAALGYTLQMPTEDRFLMDDTELRDQIATLLGGRAAEEIIFGSITTGAANDLQRATDLAERMVTTYGMSKTLGPLAYEKGQQNSFLGDGMMNPRRLVSDDTAKAIDNEVKEIVENGHQQALDILAQNRDLLEEIAQEILSKEVIEGEQLQALLERVKPLDREPVTV
>NZ_CP012375.1|WP_046660792.1|457609_458794_-|tetratricopeptide-repeat-protein
MQGLLRKLWRAIENFFTRLLGGQEGKGKVQAIESVPLTDTDYEFLYMQLLDGVSHGWHEGRILRFFEKLGDRGRQKDWVEWLERFGTRLQSSASLNQLLASRMIRLGELARAFPGIERIGEASYEIGYQLYTKETATLIWEYAGEDEAPGSYSLPQPPENLLYSGETSDFNGNDPENPQLETLTLDELFNRLQNDPTLAGQMAEQLGIENKDAESIIDSLIAQFSPQEAKTPETAEDWFNQGLEQANLGNWSNAIADWEQALTIDPQLASAWHNRGGALAMIGNYEEALNSYDRALEITPNDHQVINARGSALYGLQRWQEALECWQQVLEADDNFYQAWYNRGSTLENLGETQAAIACYQKALGIAPDFELAQTRLEALLGQKPPEDDGNPPA
>NZ_CP012375.1|WP_046660793.1|458929_460144_-|transposase
MITLTYQYKLKVNKKQEREIVHILDVCKSVYNYALSERKDWLNSRKCLADRCSLVSEYIIPADQPYPNYFVQAKNLTEAKKVDPILKTVNAQVLQQVLKTVDKAFDHIKSKGFGFPRFKKKMRSFVFPALSKNFLGDEYLNFPQLGKIRIRKSREYPSGFEPKQARIIQKASGFYVLVSFQSTELVPDMTVGKTCLGIDAGIESFVATSRGDLIKAPRFLLKVQSKLKLLQRRLKHQVKGSKNWLKLQDKIARLHEKVSNTRRDWHFKLAHYLCDLADNIFVEDINFVSWSRGIVRKQSLDSGIGSFINEILPFVAWKRGKYYLKVDKNGTSQECPNCGAITGKKALSERVHRCDSCGHIEPRDTASAKVIENRGKNAVGLTVLENARGGDLTGIDWVKLGRSS
>NZ_CP012375.1|WP_046660794.1|460583_462059_-|leucyl-aminopeptidase
MDIRSTDTSLLTWTGDTLALGLPEGAVEIAGELAELNNKLGGTLEELISETEFEGKLGSSAATRLGGGGPIRKLILVGLGKTADFDLQTLRLAAAAIARLAKQQKSQALAISLPVVGDQSATAGAITEGLLLANHQDTRFKSTKEEKGAKLATVELLGLGEQSSAIAKAEQICSGVILARELVNAPANTVTPLTMAETAEQIAAEYGLSLNILEQEECESLGMGAFLGVAKASDIPPKFIHLIYKPQGNPKRKLAIVGKSLTFDSGGLNIKGAGSGIETMKMDMGGGAATLGAAKAIAQLRPEVEVHFICPATENMISGRAMHPGDILTASNGKTIEVNNTDAEGRLTLADGLVFAEKLEVDAIVDLATLTGACVVALGEDIAGLWSSDESLGDQLQEAAKLAGEKFWPMPLEEKYFEGMKSQIADMKNTGPRPGGSITAALFLKQFIDNTPWLHLDIAGPVWSDKENGVNNSGATGFPVRTLVNWVMANN
>NZ_CP012375.1|WP_046660795.1|462513_463641_+|aldo/keto-reductase
MRYRRFGRTNWQFSLFSLGTMRCLSSESVFAATLDRALELGINHLETARGYGNSEVFLGRYLQRQGVRERVYLTTKLVPTPDRQTMEKAIAESLERLQLNHLDCLAIHGINTREHLNWIKDPQGCMKAVFLAQEAGKIGHIGFSTHAPLEIILETINTDFFAFVNIHYYFFWQRQQPAIALAQAKDMGVFIISPADKGGGLHRPPKKLEELCAPFSPLELNYRFLLSDPRITTLSVGAAIPEELESIINVCERDQPLDAAEIAVFKRLEAHLTDKLATDLCSQCYQCLPCPENINIPEVLRLRNLAVAYEMTDFGQYRYQMLENAGHWFPGRKANNCTECGDCLPRCPEKLPIPRLLFDTHELLNGPPQRRLWSS
>NZ_CP012375.1|WP_002744497.1|463773_464853_+|fructose-bisphosphate-aldolase-class-II
MALVPMRLLLDHAAENGYGIPAFNVNNMEQIQAIMQAAAATDSPVILQASRGARKYAGENFLRHLITAAVETYPHIPIVMHQDHGNEPATCYSAIRNGFTSVMMDGSLEADAKTPATYEYNVNVTAEVVKVAHSIGASVEGELGCLGSLETGKGEAEDGHGFEGELDHSMLLTDPDEAVDFVERTQVDALAVAIGTSHGAYKFTRKPTGEILAISRIEEIHNRLPNTHLVMHGSSSVPEDLLELINQFGGAIPETYGVPVEEIQKGIKSGVRKINIDTDCRLAITAAVREALFSNPKEFDPRFFLKPSITYMQKVCADRYQQFGTAGNASKIKQMSLDDYAAKYAKGQLTQVSKKVVAV
>NZ_CP012375.1|WP_046660796.1|465044_466283_+|PDZ-domain-containing-protein
MRKKSLWAGLLVGFWFCLTWMAWTPTAAAFSEEQKLLLQSWRLVNQSYYDDTFNHQNWWQVREQFIKKPLNDRTAAYNAIEQMLATLDEPFTRLLRPDQYHNLQISTTGELSGVGLQININPDNGYLEVVAPLAGSPAEAAGLTSHDRILFIDGIDTTTLTLDAAAAKMRGTAGTEVSLVILPYQKSQPKTLSLTRQRISLSPVVAVLDKNSSSLPIGYVRLNQFSANAAKEVSEAVTNLQKQGAKGYILDLRNNPGGLLQAGIEIARMWINQGTIVYTVNREGIADSFAAAGNALTDAPLVVLVNQGTASASEILAGALQDNQRGVLVGEKTFGKGLIQSLFELPDGAGLAITVAKYETPAHHDIHKLGIMPDQVVAQEPITYQEIGTEKDSQYQTAIQFLNQNTVLAKAS
>NZ_CP012375.1|WP_046660797.1|466715_468020_+|ABC-transporter-substrate-binding-protein
MQRYIRSPLALTLSISLLANFLTACNNAQTPDNTASSPTTTTPGDQGLKLGALLPITGDLAAIGQNMPEASALAVETINACGGVNGKPVTLVKEDDQTDPAAGASAMTKLAEVDKVAGVIGSFASSVSGAAVDVAVRKKVMLVSPGSTSPVFTDRAKKGDFKGFWARTAPPDTYQAQALAVLAKKKGFQNVATVVINNDYGVGFEREFVSAFDKLGGTITNKQNPVRYDPKAATLDSEAAAAFANQPDAVAAVLYAETGSLLLQAAYKQGLTKGVTVLLTDGVYSEDFTKQVGKGTDGKSIIAGALGTVPGADGQALRAFTSLWKEKTGKDVTAFVPHTWDAAILLMLAAEAAKSNTGEGIQSKIREVANGPGTEVTDACQAMEMIRKGEDINYQGASGNVDIDENGDVVGSYDVWTVKDDGTLKVIDKVTPNQ
>NZ_CP012375.1|WP_066030226.1|468593_469781_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MWQYIIPIFDPDVKNWSAEARLLRWMTFLWLSVGLVVLFSASYALADSRFDNGLYYFIRQLIWLWIGLIGFNFLVRLPIEKLLKIAPWMILLVLGLILITLIPGLGANINGATRWIKIGPILLQPSEFMKPFLVLQGAAVFGGWPRLNVNQRLTWIAIFGLILAGILLQPNLSTTALCGITLWLIALASGLPLSYMTSSALLGLTMAVVSVTFREYQRKRILSFLDPWQDPRGDGYQLVQSLLAIGSGGTTGSGYGLSQQKLFYLPFPDTDFIFAVFGEEFGFIGGILLLIMLFLYATLALIVAVKCRHRIKKLVAIGAMVILIGQSLLNMGVATGSLPTTGLPFPLFSYGGSSSLASLFLAALLIRVAREENDPDPVPTSKKSPQKTVSVFSHQ
>NZ_CP012375.1|WP_046660798.1|469852_470797_-|isoaspartyl-peptidase
MTRVNPKLIIHGGASSLEDKGGLESVRDSLRGIVKNIYNLLDNGASAVEAVTKGCMLLEDEPRFNAGTGSVVQSDGQVRMSAALMDGRHQRLSGVINVSRVQNPISLAQFLQSQEDRILSEIGAADLARELQIPLYDPLTDYRIQEWMEERKTNFNRKMARLFADSSARRGTIGVVALDQQGDIAAGTSTGGKGLERIGRVSDSAMPAGNYANPWAGVSCTGVGEDIIDECLAAKVVIRVTDGFSLAAAVEKSMHESQTNGRDLGMISLDRQGNIVWGKTAEILLAAYHDGQAIGDTLEWHGENAGLIGHVAVG

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Crispr_ID: NZ_CP012375_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_2

666681-666771

Orphan

Consensus_repeat	Method
GCTAAAAAGTGCTTCAACGCAAATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_2

>merge|NZ_CP012375|2|666681-666771|CRISPRCasFinder
GCTAAAAAGTGCTTCAACGCAAATCCATTTTAGGGATGTCAAATCGGCGAAACCCTTATACAGCGAGCAAAAAAGTGCTTCAACGCAAATC

>NZ_CP012375|2|2|666681-666771|CRISPRCasFinder
GCTAAAAAGTGCTTCAACGCAAATC	CATTTTAGGGATGTCAAATCGGCGAAACCCTTATACAGCGA
GCAAAAAAGTGCTTCAACGCAAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_002738938.1\|673830_674013_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP012375.1\|WP_103672689.1\|666850_667958_-\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP012375.1\|WP_046660932.1\|659004_659670_+\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|368753
NZ_CP012375.1\|WP_046660942.1\|675725_676988_-\|SufS-family-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|215460
NZ_CP012375.1\|WP_066029530.1\|665213_666632_+\|MloB	unknown	unknown	gnl\|CDD\|225420
NZ_CP012375.1\|WP_046660943.1\|678612_679383_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|214372
NZ_CP012375.1\|WP_046660938.1\|669520_670870_+\|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	unknown	unknown	gnl\|CDD\|235059
NZ_CP012375.1\|WP_046663591.1\|677043_678369_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|273908
NZ_CP012375.1\|WP_046663590.1\|657654_658446_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378929
NZ_CP012375.1\|WP_002801237.1\|659710_660706_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|177082
NZ_CP012375.1\|WP_046660939.1\|671034_673662_+\|family-10-glycosylhydrolase	unknown	unknown	gnl\|CDD\|224563
NZ_CP012375.1\|WP_002747783.1\|662143_662698_-\|YqeG-family-HAD-IIIA-type-phosphatase	unknown	unknown	gnl\|CDD\|225090
NZ_CP012375.1\|WP_046660937.1\|668223_669360_-\|DUF3747-domain-containing-protein	unknown	unknown	gnl\|CDD\|372192
NZ_CP012375.1\|WP_046660941.1\|674185_675691_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP012375.1\|WP_046660930.1\|655407_657651_-\|stem-cell-self-renewal-protein-Piwi	unknown	unknown	gnl\|CDD\|240017
NZ_CP012375.1\|WP_002739055.1\|664811_665063_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029529.1\|663557_664721_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|178068
NZ_CP012375.1\|WP_046660931.1\|658642_658999_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP012375.1\|WP_066029528.1\|662814_663438_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP012375.1\|WP_046660944.1\|679580_681023_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|236990

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_002738938.1\|673830_674013_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	2.78795e-12
NZ_CP012375.1\|WP_103672689.1\|666850_667958_-\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP012375.1\|WP_046660932.1\|659004_659670_+\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	1.05196e-07
NZ_CP012375.1\|WP_046660942.1\|675725_676988_-\|SufS-family-cysteine-desulfurase	gnl\|CDD\|215460	PLN02855, PLN02855, Bifunctional selenocysteine lyase/cysteine desulfurase.	0
NZ_CP012375.1\|WP_066029530.1\|665213_666632_+\|MloB	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	2.11227e-69
NZ_CP012375.1\|WP_046660943.1\|678612_679383_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|214372	CHL00131, ycf16, sulfate ABC transporter protein; Validated.	5.67081e-147
NZ_CP012375.1\|WP_046660938.1\|669520_670870_+\|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	gnl\|CDD\|235059	PRK02705, murD, UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase.	0
NZ_CP012375.1\|WP_046663590.1\|657654_658446_-\|hypothetical-protein	gnl\|CDD\|378929	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	1.66857e-08
NZ_CP012375.1\|WP_002801237.1\|659710_660706_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|177082	CHL00180, rbcR, LysR transcriptional regulator; Provisional.	0
NZ_CP012375.1\|WP_046660939.1\|671034_673662_+\|family-10-glycosylhydrolase	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	2.74349e-60
NZ_CP012375.1\|WP_002747783.1\|662143_662698_-\|YqeG-family-HAD-IIIA-type-phosphatase	gnl\|CDD\|225090	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only].	3.01395e-58
NZ_CP012375.1\|WP_066029528.1\|662814_663438_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.61556e-24
NZ_CP012375.1\|WP_046660941.1\|674185_675691_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.63942e-65
NZ_CP012375.1\|WP_046660930.1\|655407_657651_-\|stem-cell-self-renewal-protein-Piwi	gnl\|CDD\|240017	cd04659, Piwi_piwi-like_ProArk, Piwi_piwi-like_ProArk: PIWI domain, Piwi-like subfamily found in Archaea and Bacteria. RNA silencing refers to a group of related gene-silencing mechanisms mediated by short RNA molecules, including siRNAs, miRNAs, and heterochromatin-related guide RNAs. The central component of the RNA-induced silencing complex (RISC) and related complexes is Argonaute. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the 5' anchoring of the guide RNA and the other, the catalytic site for slicing. This domain is also found in closely related proteins, including the Piwi subfamily, where it is believed to perform a crucial role in germline cells, via a similar mechanism.	2.34766e-36
NZ_CP012375.1\|WP_046660931.1\|658642_658999_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.87473e-09
NZ_CP012375.1\|WP_066029529.1\|663557_664721_+\|ferrochelatase	gnl\|CDD\|178068	PLN02449, PLN02449, ferrochelatase.	0
NZ_CP012375.1\|WP_046663591.1\|677043_678369_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|273908	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD. This protein, SufD, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. SufB and SufD are homologous. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	3.16571e-98
NZ_CP012375.1\|WP_046660937.1\|668223_669360_-\|DUF3747-domain-containing-protein	gnl\|CDD\|372192	pfam12565, DUF3747, Protein of unknown function (DUF3747). This family of proteins is found in bacteria. Proteins in this family are typically between 215 and 413 amino acids in length. There is a conserved DSNGYS sequence motif.	6.47394e-93
NZ_CP012375.1\|WP_046660944.1\|679580_681023_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|236990	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional.	0

>NZ_CP012375.1|WP_066029530.1|665213_666632_+|MloB
MINLETLEGWLNAPVENERLEFKQAKNQFDTIKLLKYCVALANEGGGHFILGVTDKRPRKIVGSQAFPTPEEINSIKSLIVQKLRLRVEITELAHPDGRVLVFEVPTRPTGQPIAFEGAYLMRAGEDLVPMTPDRLKRIFAEDQQDWFCQSARSHASPDEVIDLLDTQTYFELLKLPYPSHRDAVLERLQSDQLLDKTSKGWTIPNLSAILLARQLESFSPTLARKAPRVIIYEGTGKIKTRLEQTVTKGYAVGFDGLVNFVHDLAPQNRVIEEVLREEVKMFPRQALRELIANALIHQDFLATGASVMIEMYDDRVEISNPGIPFIKVERFIDEYRSRNEQLADIMRRFGICEEKGSGIDKVISAAEKFQLPAPDFRVGEIRTTSILFAHQDFGKMSQSDRIRACYQHCCLLYVDNQRMSNQTLRNRFCLNESKNNTVSQVIGATKEAGLIKLDESESKSTRYARYLPFWA
>NZ_CP012375.1|WP_002739055.1|664811_665063_-|hypothetical-protein
MVIIEITNVEEILSAKIGSFAAKIVQALADDEGKVEEVLIKELQANFQERGIKANLFSVTGLDMLGNGRLEVNVNVRSANMMS
>NZ_CP012375.1|WP_066029529.1|663557_664721_+|ferrochelatase
MGRVGVLLLNLGGPERLEDVRPFLFNLFSDPEIIRLPIKGLQKPLAWLISTLRASKSQENYRQIGGGSPLLKITEAQATALQQRLAEMGREVSVYIGMRYWNPFTEEAIERIKRDHIKKLVILPLYPQFSISTSGSSFRVLEEMWQQDPYLRLTEYTLIPSWYDHPTYLSAMADLIARELEQCPNPDQVHIFFSAHGVPQSYVEEAGDPYQREIEECTRAIMRTLNRPNQYTLAYQSRVGPVEWLKPYTEDALKGLGEQGIKHLLVVPISFVSEHIETLQEIDIEYREVAEEAGIEHFQRVPALNTHPMFIESLSQLVVKSLEENPTTFEQITHPKANMKMYPQERWEWGMTTAAEVWNGRLAMIGFLAIIIELITGQGPLHFVGLL
>NZ_CP012375.1|WP_066029528.1|662814_663438_-|class-I-SAM-dependent-methyltransferase
MATILRPLSYQYQWLYDGISRLAALAVGGENRFRQLALEGLKIAKNDPILDLCCGAGQTTRYLVPLSDHCTGLDVSPRALERASLAVPQAHYVEGLAEKMPFSAGEFALVHTSAALHEMEPEQLEEILKEVYRVLRPGGIFALVDFHRPTNPLFWPSLALFLQLFETDTAWQFIDRDLIRSLQAIGFRDCQQKLYAGGSLQVIQAAK
>NZ_CP012375.1|WP_002747783.1|662143_662698_-|YqeG-family-HAD-IIIA-type-phosphatase
MTRAKILQPDLILGDTILGLTLEILSQHQIKGLILDVDDTLVPLQETTVSDDLQRWVDSLRLYLPIWLVSNNLSENRIGAIADNLQLPYLLGAVKPSRRKLRQAMAAMSLPPQQIAMVGDRLFTDVLAGNRLGMFTILVKPMVNPLTGGAAYPIHDFEVWISQILGVSLHPQHYFIKPDQSSQK
>NZ_CP012375.1|WP_002801237.1|659710_660706_-|LysR-family-transcriptional-regulator
MTDIPFTLDQLRILKAIAAEGSFKRAADTLYVSQPAVSLQVQNLEKQLNVPLFDRGGRKAQLTEAGHLLLSYGEKIITLCQETCRAIEDLQNLQGGTLIVGASQTTGTYLLPRMIGLFRQKYPEVSVQLQVHSTRRTSWSVANGQVDLAIIGGEVPAELQETLRIIPYAEDELALVLPIFHPLSKVEMIQKEDLYRLKFITLDSQSTIRKVIDKVLTRCEIDTKRLKVEMELNSIEAIKNAVQSGLGAAFVSVTAIEKELQMGVIHATRIKDVEIRRTLSVIINPNRYRSKAAEAFTLEILPQFSTYPEYLADDHNFEPIPNSQTAEIISK
>NZ_CP012375.1|WP_046660932.1|659004_659670_+|ImmA/IrrE-family-metallo-endopeptidase
MDIIKPYSFIPKTEIEAQADNILKKVKAHRRRPLKNCDIAEAAADHFDLAIEWTDIKPDKEGEIAAMIIPIEKKIILNEDVKFLKDSQNSSLAKEGFKNSSLAHEIGHFVLHINQTAVSNFFERINQGDSLGTIQPFLCRTVDSSQRIEWQAQYFASCLLMPMSELEKAIKGRDLTKWGLLYAIADELGVTITNLRSRLESLHWIKVDKKVIYRGSNFPKR
>NZ_CP012375.1|WP_046660931.1|658642_658999_+|helix-turn-helix-transcriptional-regulator
MSETFGQVIRKARREEEYSQRELAKLIGVDYTYLSKLENDHAGYPPSQQVIESLATHLKLNAQTLGELAGRISSDDQKVFKELVQKYQQMPILLRRMKDNPNFAKKVISEATKLEPEE
>NZ_CP012375.1|WP_046663590.1|657654_658446_-|hypothetical-protein
MSYSLWRSLKPAIGYENWHCQTKRGFEKARNKEPEVQRLLSQDNQSQKIGKLAQRGVFEFHQEPARLSGSDGVEQVAEILQLNQESPEIQARVLVILNNYYQQPILLNKEIINLSRGDEGYPEPIVIEQGNYRFNLSAAFDCIFREADDTIHILDLKTGQSNFDRRQAHVYLLAASYLYPQEKIVASFYNLETQTSSENISLSSEAIEAVKIELAFLSKKHQQQLKKYKNHPEDFYHIFPPQSGYACRYCPFTSICDYANKEV
>NZ_CP012375.1|WP_046660930.1|655407_657651_-|stem-cell-self-renewal-protein-Piwi
MNYTVANTANSPIFLSEISSLTLNNSCLNCFKFNHQVTKKIGNRFSWQFSHKFPAVVVIFEDNCFWVLAKDEKSIPSLQQWKEALSDIQEVLREDIGDHYYSIHWLKDFQITALVTAQLAVRILKIFGKFSYPIVFPKDSEISENQVQVRREVDFWAEIINDTDPAICLTVDSSIVYSGDLEQFYENHPYRQDAAKLLVGLKVKTIETNGTAKIIRIAGTIGEKREYLLTKATGSISRRKLEEAHRDQPVVAVQFGKNPQDYIYPLAALKPCMTDKDESFFQVNYGDLLKKTKIFYAERQKLLKLYKQEAQKTLNNFGFQLRERSINSQEYPEVFWTPSISLEQTPILFGKGERGEKRETLKGLSKGGVYKRHREYEDPARKIRLAILKPDSFKVGDFREQLEKRLELYKFETILPPENQINFSVEGVGSEKRARLEEAVDQLIRGEIPVDIALVFLPQSDRNADNTEEGSLYSWIKKKFLDRGVITQMIYEKTLNNKSNYNNILHQVVPGILAKLGNLPYVLAEPLEIADYFIGLDVGRMPKKNLPGSLNVCASVRLYGKQGEFVRCRVEDSLTEGEEIPQRILENCLPQAELKNQTVLIYRDGKFQGKEVENLLARARAINAKFILVECYKTGIPRLYNLQQKQINAPSKGLALALSNREVILITSQVSEKIGVPRPLRLKVHELGEQVNLKQLVDTTLKLTLLHYGSLKDPRLPIPLYGADIIAYRRLQGIYPSLLEDDCQFWL
>NZ_CP012375.1|WP_103672689.1|666850_667958_-|peptide-chain-release-factor-2
MEISELKKGIEIVGLRLGKTQDYLDLPTLRAKIKDLEQVAAVPTFWDNPDTAQKTLQELNECKSSLETYQGWCEQLEDTKAIIELLELESDRTLLEEATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRSNVETTDVTRVMNGDLDSFIEAYLRLGGAV
>NZ_CP012375.1|WP_046660937.1|668223_669360_-|DUF3747-domain-containing-protein
MNLKSSLKFTLLFSLLGGCLLTTPSQATLFEQREVNQEDFIAIARPYGNGKYDLLILQQIQGKRQCWAVNGTEPTIVQPLLLDFDFTGSCERATDSNGYSLRIQGKDYGLEYLLRIVQRNGELVLVGTPRNPRQSEVIIGRTKGLGTGLIQIYLIDGWRFTKRSLAGQNLSHIYLTADSPNFNPPPELLAGNSYSLPRESVKAETPVNPPGDPEVREYTFTAAETAVQSNPEPVVTNPVPEQNSTPAPPVTSNLPPLTPPLRLGSGQANAQNNNAIVPPPPPRNLGNQRSLSDVITFNRPAANPSSGNTSNSGRKGFKVVIEAKNESDRSKVRSLYPDAFPTSHQGRRVWQIGAFSSRDKAENALQSLAPLRGSIVPF
>NZ_CP012375.1|WP_046660938.1|669520_670870_+|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase
MAKAAIIGLGRSGIAAARCLKRDGWQVTLSDRSDSPSLQATKTNLESEGIIVNLGQNLSLGASDLPDLIVVSPGVPWDAPILITAREKGIDTIGELELAWRYLQSSPWLGVTGTNGKTTTTALCAAIFQKAGLNAPSCGNIGYAACELALKADKYDWIIAEISSYQIESSRDLSPKIGIWTTFTPDHLSRHQTLENYYQIKASLLQRSDRQILNGDDPYLRQIGVSQWQQAYWTSVQGKEALLGDPSRGVYLQDNWIVAFGELIAPVNLLKMVGSHNQQNLLMAVAAARLAGIEKKAITEAIATFPGVAHRLEYVCTYKGLDFINDSKATNYDAAAVGLKSVPSPAILIAGGEAKAGDDRAWIAEIKAKVATVLLIGDAAADFARRLQSAGYQDYECVETMDRAVQRAAELGLAKAAKVVLLSPACASFDQYQSFEHRGDHFRQLSLQL
>NZ_CP012375.1|WP_046660939.1|671034_673662_+|family-10-glycosylhydrolase
MLGSSFRLDHLFKKRLITCLFSCVAVLLPIPVLATPVAVLKSQENANQWTAITDRLQNVGVNYCILQSNQWQSDADLNKIKVLIIPNVETISGLQASVLSRWLNRGGKIIVTGPAGNLSEPAVRDQLRSLFGAYWAYPHSQAYTLRPTNLGEVKNQKPLASSLLGGVVIPTGVNSQTVAVWGARNNPPAVVLNNNSIFLGWRWGSDAVANLALDSAWLETALQRYGINRSSSLNTIAPYCQGNSTIVNNINNTPTATAPRPPLPQISENPPSETARLSPNTEAIPPRASLTPQQISQMTAELQGLIGRYGATLLALEASNSNISNTDKSLAQAFHNRAKNSPTTDTARRFRLALENAQGALNNFQNLIAQGDYTQAREFWLQARRNLWDHYPTNRQFAQPEIRAMWLDRGTIVEAKNEEDLAKVFDRMAAAGINVVFFETVNASYTIYPSQVAPEQNPLTRGWDPLKVAVKLAHERNMEIHAWVWVFAAANQAHNKVLEQPLDYLGPVLSRNPDWGATNKSGGSFDYSQGTKKAFFDPANPDVQNYLLSLYEEIVKNYDVDGLQLDYIRYPFQNQNSNQTYGYGKSSRWLFKQMTGVDPITLNHRGALWEQWTSFKIRHVDTFVSQVSTRLKQIRPHLKISAAVFPIEQKERLYRIQQNWEEWGQNQWIDLIFLMTYALDTGTLEEKTQSLFDRKIAGNALIVPGIRLLKVPDQVTIDQLQFIRNLPTSGFALFATENLNPNLQTILNRIQGSIITKKAEPLPHRQPFKTAAARFNSLRQEWSFLIVNNLWAMEERTLKAWGQEVDEMANLLEQLATNPSPRNLTLTQNALKRFSYQFKSVMSRQKDLSAYQIQVWENRLATLQSLLSYGQRVEF
>NZ_CP012375.1|WP_002738938.1|673830_674013_-|30S-ribosomal-protein-S21
MTQVVVGQNEAIESALRRFKRQVAKAGIYADIKKHQFFETPQEKRKRKAVARRRQRTRRR
>NZ_CP012375.1|WP_046660941.1|674185_675691_-|RluA-family-pseudouridine-synthase
MKEVTYYYQGICPETGELLRLPRTLLAEKIAQDLMTTITNPQGKMYGILLGENAAGEIEILKAFSGQGEAAGWVPSLVGREKIMLEEKRVLQLLETIKQEIITLQSIPEHNLYRLNQANFECKIQALQQQHQNHKQERNRLRNLGNLKPEELEKLNNISRQEKRARKQLKQEQKQVLDPLIDKINVANQRIIELKQQRRKLSKQLQELLYQSYCLNNFSGQSLSLAKLMGSNLLPTGTGECCAPKLLNYAAMKGLKPVAMAEFWWGESNRDRKQGEFYGACQERCQPLMGFLLSGLRSSLEIIYEDEGIIAINKPAGLLSVAGRYQDSQDAVVNRFRRQGKNVIPVHRLDRETSGILLLAKSLDIYRCLSQQFQRREVEKIYEAILSEVVERESGIIDLPLWGNPQNRPYQTVDWQRGKASQTYFKVIGKEGNYSRLEFIPYTGRTHQIRVHSQAGLGIGILGDLLYNGKQSDRLYLHAKQLSFRHPQTETKLDLIIPTPF
>NZ_CP012375.1|WP_046660942.1|675725_676988_-|SufS-family-cysteine-desulfurase
MTIIQEKTLAQKVRADFPILHQTVHDKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSEESFDLEQYKSLLSDKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAYLFKKLGEIEGLRIYGPPPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFANCFS
>NZ_CP012375.1|WP_046663591.1|677043_678369_-|Fe-S-cluster-assembly-protein-SufD
MTAIITKPEQSGELLLKLSRETVPTIDNGKILELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNSHLVFVNGIYQPELSDISALPPGVSVGNLANAQKDVLVNYLGKEKTPEFFTALNQAGLSDGAVIHVTANTVVTTPIHLLFITVVEEIPRFYQPHSLIVAETGASVNIIENYGALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQAHDSRYTLNEINLGAKLCRHNLDVLQKGEQTETNLHGLAMITGQQTADTHSAIYLNHPHGITKQLHKCIVDGSAHAIFNGKVFVPKPAQLTNASQLNRNLLISNKARVNTKPELQITADNVKCSHGATVSQLEADDLFYLQSRGLSADTARSLLIDAFSAEILAKIPLESLRQRLGQCVACRSVE
>NZ_CP012375.1|WP_046660943.1|678612_679383_-|Fe-S-cluster-assembly-ATPase-SufC
MSEVILSVKNLTASIDGNQILKGVNLEIKAGETHAIMGRNGSGKSTFSKVIAGHPDYEVTGGEIIYKGENLLEKEPDERALMGIFLAFQYPLEIPGVSNLDFLRVAYNARQKHLGSEELDSFDFEELVEKKLEVVQMNPSFLGRSLNEGFSGGEKKRNEILQMALLEPTLGILDEIDSGLDIDALRIVAQGVNHLATPDNAFLLITHYQRLLNYIEPDVIHVMYDGRIVTSGGKELALELERTGYDFLDEQVLAVK
>NZ_CP012375.1|WP_046660944.1|679580_681023_-|Fe-S-cluster-assembly-protein-SufB
MSATTVKNLVNQPYKYGFITDIESETIPRGLNEEIIRLISAKKKEPEFMLDFRLRAYHQWQKMTEPSWPHVSYPAIDYQNIIYYSAPKQKKAKLNSLEEVDPTLIETFEKLGIPLSEQKRLSNVAVDAIFDSVSIATTFKEKLAEQGVIFCSISEALQEHPELVQKYLGTVVPVGDNYFAALNSAVFSDGSFVFIPKGVACPMELSTYFRINNGETGQFERTLIVAEEGASVSYLEGCTAPMYDSNQLHAAVVELVALDNADIKYSTVQNWYAGDANGKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIGRNTKSTIISKGISAGNSQNSYRGLVKMGPKAKGARNYSQCDSMLIGDNAEANTFPYIQVDNNSAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDVLSKLPMEFAAEADKLLSLKLEGTVG

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Crispr_ID: NZ_CP012375_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_3

747159-747249

TypeV

Consensus_repeat	Method
GTTCAGCTTTAAGACGCTCTTGTTCTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_3

>merge|NZ_CP012375|3|747159-747249|CRISPRCasFinder
GTTCAGCTTTAAGACGCTCTTGTTCTAATTGTAAACTTGCTTGTTCTAACTGTAAACTTGCTTGTTCAGCTTTAAGACGCTCTTGTTCTAA

>NZ_CP012375|3|3|747159-747249|CRISPRCasFinder
GTTCAGCTTTAAGACGCTCTTGTTCTAA	TTGTAAACTTGCTTGTTCTAACTGTAAACTTGCTT
GTTCAGCTTTAAGACGCTCTTGTTCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046660986.1\|737992_738994_+\|beta-ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|215185
NZ_CP012375.1\|WP_046660990.1\|742496_744218_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP012375.1\|WP_046660988.1\|740373_741594_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP012375.1\|WP_046660999.1\|753153_753534_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_103672690.1\|748099_748570_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP012375.1\|WP_046660991.1\|744214_745648_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226196
NZ_CP012375.1\|WP_046660992.1\|745761_746394_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_046660987.1\|739216_740143_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|272922
NZ_CP012375.1\|WP_046661002.1\|763820_765047_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP012375.1\|WP_066029538.1\|735174_736467_-\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224938
NZ_CP012375.1\|WP_046660985.1\|736616_737672_+\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP012375.1\|WP_046660997.1\|749406_750621_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP012375.1\|WP_046660998.1\|750914_752351_+\|TM0106-family-RecB-like-putative-nuclease	unknown	unknown	gnl\|CDD\|274603
NZ_CP012375.1\|WP_046661003.1\|765467_766478_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046660989.1\|741605_742493_+\|glutaminase	unknown	unknown	gnl\|CDD\|234880
NZ_CP012375.1\|WP_046661000.1\|753762_754380_+\|methylthioribulose-1-phosphate-dehydratase	unknown	unknown	gnl\|CDD\|274521
NZ_CP012375.1\|WP_046660993.1\|746415_747087_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_046663594.1\|754632_754968_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_158524791.1\|755160_762921_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380205
NZ_CP012375.1\|WP_103672738.1\|752911_753136_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046660986.1\|737992_738994_+\|beta-ketoacyl-ACP-synthase-III	gnl\|CDD\|215185	PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III.	0
NZ_CP012375.1\|WP_046660990.1\|742496_744218_+\|hypothetical-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	9.68562e-07
NZ_CP012375.1\|WP_046660988.1\|740373_741594_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	1.15889e-161
NZ_CP012375.1\|WP_103672690.1\|748099_748570_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	1.4063e-52
NZ_CP012375.1\|WP_046660991.1\|744214_745648_-\|membrane-protein	gnl\|CDD\|226196	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	2.57846e-163
NZ_CP012375.1\|WP_046660992.1\|745761_746394_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.04482e-18
NZ_CP012375.1\|WP_046660987.1\|739216_740143_+\|ACP-S-malonyltransferase	gnl\|CDD\|272922	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase. This enzyme of fatty acid biosynthesis transfers the malonyl moeity from coenzyme A to acyl-carrier protein. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.23185e-102
NZ_CP012375.1\|WP_066029538.1\|735174_736467_-\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224938	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].	1.24448e-49
NZ_CP012375.1\|WP_046660985.1\|736616_737672_+\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	2.37277e-179
NZ_CP012375.1\|WP_046660997.1\|749406_750621_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	2.34572e-94
NZ_CP012375.1\|WP_046660998.1\|750914_752351_+\|TM0106-family-RecB-like-putative-nuclease	gnl\|CDD\|274603	TIGR03491, TIGR03491, RecB family nuclease, putative, TM0106 family. Members of this uncharacterized protein family are found broadly but sporadically among bacteria. The N-terminal region is homologous to the Cas4 protein of CRISPR systems, although this protein family shows no signs of association with CRISPR repeats.	0
NZ_CP012375.1\|WP_046660989.1\|741605_742493_+\|glutaminase	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	1.27079e-129
NZ_CP012375.1\|WP_046661000.1\|753762_754380_+\|methylthioribulose-1-phosphate-dehydratase	gnl\|CDD\|274521	TIGR03328, dehydratase-enolase-phosphatase_complex_1, methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine. [Amino acid biosynthesis, Aspartate family].	5.136e-65
NZ_CP012375.1\|WP_046660993.1\|746415_747087_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.20651e-17
NZ_CP012375.1\|WP_158524791.1\|755160_762921_-\|hypothetical-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	1.03628e-13
NZ_CP012375.1\|WP_046661002.1\|763820_765047_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80

>NZ_CP012375.1|WP_046660993.1|746415_747087_-|Uma2-family-endonuclease
MTFTPAIDPDIEYPDSDGKPMADNTEQYEWIVKIKENLEILFANSPNVFIAGDLLWYPVQDKKITGPVAPDVMVVFGRPKGRRGSYKQWQEDNIAPQVVFEILSPSNSLEEMERKLLFYQRYGVEEYYLYDPDSHNFQGWWRREGLLSSIPEINGWVSPRLNIRFELRGDELEIYSLDGQKFLTSIELSQKAEEASLQLEQERLKAERLAEYIRSLGIDPDTL
>NZ_CP012375.1|WP_046660992.1|745761_746394_-|Uma2-family-endonuclease
MTFTPAIDPDIEYPDSDGKPMADNTEQYEWIVKIKENLEILFANSPNVFIAGDLLWYPVQDKKITGPVAPDVMVVFGRPKGRRGSYKQWQEDNIAPQVVFEILSPSNSLEEMERKLLFYQRYGVEEYYLYDPDSHNFQGWLRREGLLSSIPEINGWVSPRLKIRFELRGDELEIYSLDGQKFLTSIELSQKAQRLAEYIRSLGINPDTLS
>NZ_CP012375.1|WP_046660991.1|744214_745648_-|membrane-protein
MKAWAKSLEKPAVEFSETQLTLLSGKIPDGLRGSLYRNGPGRLERGKQKVGHWFDGDGAVLAVHFHDKGASATYRYVQTAGYQQESVANQYLFPNYGMNAPGFFWNNWGKEVKNAANTSVLALPDKLLALWEGGFPHKLDLQSLETLGLDNLSSLQAKETFSAHPKVDVFRGEIFNFGVTISAKVSLNLYKSDSTGEIIQKNTFDLDRLSLLHDFVLAGQYLVFFVPPIKADKLSILLGFKTFSDAMQWQPELGTRILIFERDSLQLVSESVTDSWFQWHFANGCVNDQGNLEIVFVRYDDFKTNQFLKEVVTGETETLAIGKLANITINPLSAKVINQEILSDLSCDFPVVSPQLVGQKWQNTFLAVHRPDSDISREIIGLPACYNHSTGKLTIAYLENNCYGTEPIFVCDGLSPETGWLIVVVYDGNNHSSQVRIYDSQQLEKEPLCCLQLPSVIPPGFHGTWQEKSEKALINSF
>NZ_CP012375.1|WP_046660990.1|742496_744218_+|hypothetical-protein
MKISLNSSKKHRFYLVIILLIFMALCVTSLFFPLPESLNYDEGYHYESGLEILRGRAAQRGDEDIYHRNIMPASALPPLVDQTIQNLFPISKYLNLENKFFGRFATIIISVFLAIYVFIWSKQLYGLSAGFLALIIYILDPNIIGHSRIITQDLFGAASIFIASYYFWSFLRFGGRKNLVLSILTFGIAQICRLTAVYLVPIYVILSVGFYHREIIQSIQQKNILVIQQGIKRSIFYILALILSTMLIINIGYSFEGSGRQLGDYQFLSQSFQRLQTNPIFKSLPIPIPAAYLQALDFGKYKQETGFGSGMPYLLGQLGFIVDPVQGFKIKGFPQYFLIAFLYKVPIATQIFIWLGFISLFLWRKQLNFWQNEAFLIIPTVLYFILMSSNTAQIGIRYILMIFPFLFVFASRIVTSWPAYKRPYRILIIVLTLYLLISNLSYFPHYISYFNELVIDRKMSYQVLADSNLDWGQNKNYLQDYLQKHPNALFIRYDGDNKLNLVIENQKVATPQVSLDNPINLLVIEANQLIGITTDSNHFYWLRSSRKPIDHLAYSYLIFKISSQDATNIFGKN
>NZ_CP012375.1|WP_046660989.1|741605_742493_+|glutaminase
MNRLARLRVEDIQAWLGEVHLSDRKGQTPYYIPVLNQVNPEVFALQIHCLEGEILSWGDATVTFPLMSVIKPFLLLYILTHLGEDAVFRRVGKQASSYPFNSLTQLQEDCGFPRNPMINSGAIALADLLAGSTPESRCENLLLWLNEMGNCQLFLDRSVLESVHSYPNTHNQALSLELEKNGYISHRYLALETYNQICCLSGKIADLANLGKLILAAPFGEIILEIMTNCGLYEASQQFALEVGFPTKSGVSGALLSIVPEQGAIACYSPLLNEQGNSILGLNLLTKISHFVKEN
>NZ_CP012375.1|WP_046660988.1|740373_741594_-|molybdopterin-molybdotransferase-MoeA
MYSVKEAESIILTQIQPRQETEKVSLEAAFGRILAEDISSDLDFPYWDNSAMDGYAVRYEDVKDINPENPVTLKIIAEIPAGQAPEIIIQPGETARIFTGAMLPAGSDTIIMQENTQKQGERVAILIPPEKIGLFVRQRGTFYRAGNTLLKAGIAINSPEMAVLATAQATELTVFSRPQVAIFSTGDELINPDETLQKGQIIDSNRYALTAFVASLGAIPRPLGIIKDNPDLLRETIRKAINSSAIVLSTGGVSVGDYDYIEGILGELGGKILIGSVAIQPGKPLTFATFPNGCIYFGIPGNPVSALVSCWRFVQMAIKKLSGLTDYQNKFLRVITRDTLKSQGQREVYLWGKIEIIEGVYQFQLASGQHNSANLINLAGTNALAIIPQGKTTIQAGETVEVMIVS
>NZ_CP012375.1|WP_046660987.1|739216_740143_+|ACP-S-malonyltransferase
MKTAWIFPGQGSQALGMIGDLAESALGQERLEIAAKILGWSVLEKCQGDEETLSRTLYTQPCLFVVESILADLLQEKGHFPDLVAGHSLGEYSALYAARVFNFETGLNLVQNRSRLMDAAEGGKMAALMKFDRTILETVVNQTENVVIANDNSAEQVVISGTPEAVDLVLGQVKVKRVMPLKVSGAFHSPLMENAAIQFQQILELVNFRSAKVPVISNVNPSQPITDAEELKSYLIQQMTSSVRWREIMLKLLDVGVEKAIEVGPGKVLTGLIKRTVPAIELENISQLADISNGSEDVKLQGSLIGVG
>NZ_CP012375.1|WP_046660986.1|737992_738994_+|beta-ketoacyl-ACP-synthase-III
MSGFGPAVVITGCGSATPAQFLSNEELSQIVETSDEWIKSRTGIGKRHLADQSVSLSQLAAQAAIKALEMAQVSPRDIDLILLATSTPDDLFGSAAQVQSQIGANRAIAFDLTAACSGFLVGLVTATQFIRTGTYRNVLVIGADVLSRWVDWNDRATCVLFGDGAGAVVCQANDTKDNILGFELHSDGSQNGSLNLAYEGEELPLKQGVRVQKGTYKPLTMNGREVYRFAVAKVPEVIEKALYRANLTTSDIDWLVLHQANQRIMDAVSERLKLPPEKVISNLSEYGNTSAASIPLALDEAVRSGKVKKGDIIASSGFGAGLTWGGIIFRWGD
>NZ_CP012375.1|WP_046660985.1|736616_737672_+|phosphate-acyltransferase-PlsX
MAETALNRARIAVDAMGGDHAPNEIIAGSMRASEELDVEVLLVGDSERIEAYFQHHPRPKNLTIVHAEEVVAMDEEPITAIRRKPAASINVAMDLVKQNRADAVVSAGHSGAAMAAALLRLGRLKGIDRPAIGAVLPTMLAGKSVIILDVGANVDCKPKYLEQFALMGTIYSKYVMGVEEPQVGLLNIGEEASKGNDLALKTYELLENNQQIPFIGNAEGRDVLSGQFDVIVCDGFVGNVLLKFAEAVGGVILQILKEELPRGIQGKVGTALIKPNLKQIKQRMDHAEHGGALLFGVDGVCVISHGSSQAPSIFNAIRQAKNAVDNRVSERIQAYNDHHHQLKKLSVNGED
>NZ_CP012375.1|WP_066029538.1|735174_736467_-|D-alanyl-D-alanine-carboxypeptidase
MFSVFNLAVFGFLFGWLGGQSQPIANIPLISWQNQPIFDLPTAPDPRVAAIVADYLQDLAKKGLNSSQQRVLIETEWADLADHQGNLPASGASLTKIATTLAAVETWPLDHRFATRFYTTGELKNGVLEGDLIIEGSGDPLFVWEEAIAVGNGLDQLGIRQVKGDLIITGKFAMNFQTDPLKAGELLKIGLNQSKWSKETQKAFKSLPSGTQAPQVKILGMVRASQIRPENARLLLRHQSLTLTELLRQMNIYSNNVMSEMLAELLGGPAAVDAINTKITGVGAEEIQLINGSGLGVENRLSPRAVIEILKALDRKLANQPIKVADLFPVGGRDTKGTMQWRAIPKGVVIKTGTLAQVSALAGEIPTQERGKVWFVIMNAGSGNIEGFRNQQDRVLQALDQHWQILPEATKGSIPERSFLGDPSRISQGF
>NZ_CP012375.1|WP_103672690.1|748099_748570_+|DUF29-domain-containing-protein
MMTALYEEDFVLWTEKTAELLKRKEFDLVDWENLIEEVECMGKSERQAITSLLTVLIEHLLKLSYWESEKERNARHWIVEIAAFRAQLEQKIDSATLANHARDSWEKAYLTARKSLINARVVDKNAIPLESIFTLEQVLDGDWFPIDIEPFLETRP
>NZ_CP012375.1|WP_046660997.1|749406_750621_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MQNLDENSLDFAVSKPDLAEQRQEFRGLSNKVYFNFGGQGTLPKAGLEAIIDAHNFLQQQGPFSGRVNDWITRKTELLRQEMAQELGISPSTLSITEDVTVGCNIALWGVDWQAGEHILLTDCEHPGIMATVREIARRYHLEISTCPIRETLNGGNPIEVISAHLRPKTRVLVVSHVLWNTGQVLPLKEISQLCHHNSVTEKPVLVVVDAAQSVGCLPLDLSATGADCYAFTGHKWWCGPAGVGGLYIRPEIFPSLQPTFIGWRGIETDNRGQPIGWKPDARRFEVATSAYPQFEGLRATIAVHNAWGDGGQRYEKICQLAAYLWGELNTIKGVKCLKNSPPESGLVSFQIDSTISPQNLVQQLEKQGFLLRTLLDPLSVRACVHYFTLPSEIEQLVAAIKKLV
>NZ_CP012375.1|WP_046660998.1|750914_752351_+|TM0106-family-RecB-like-putative-nuclease
MLLTDDLLLDYQRCQRRAFLNLYGNSQEKDPERDFLLKLRQESQSHVKKVLQDSYPDYCSLTTPTSDILAAARETEALMRQGVSCIYHGVLLQSAYPVSLTGSPHLLIKQAGKSKFGDWIYYPLNIQLGRRPKPEYKLLATFYAYLLASMQGVFPGYAEIVLRRHNRYRVELNLWLTKLQEIIKKFGEMVINSQEPEVFISRQRCSLCHWYSHCYGIAQASQHLSLVPGVTPSRYQFLQSLGISTMESLALTCPTRMGEGMGVEVANQLQLQAQAIIENRAFRKSNGKTAYLSPLPRAEIEFYFDIEAEPEQNLDYLLGILRVDYRVNTQQFYPFLAEKPEDEGRIWQEFLTLVMQDYQAPIFHFSEYEVETIKRLGYLYKTPSSLINQLVSRCFDLHYYVVNSVTFPVESYSLKSLANWIGFQWRDRGVSGDQCVWWYDQWLKTGDRTLLAAILRYNEDDCRATFILKDWLLTYPTP
>NZ_CP012375.1|WP_103672738.1|752911_753136_+|hypothetical-protein
MFSPLFPLLLLLLSFLSLLWYQKTDNDIFKALAVSSLIFAIIWGLILVHWSIHLLGLLLLLKFRSPRFQFGARA
>NZ_CP012375.1|WP_046660999.1|753153_753534_-|hypothetical-protein
MNNNFFRSYSVNDSGLGCFLSLILVGLLLGSIGLGWLVNGFLILVAFLIISPVIAWGIFRWWLRRNLVEDSCPVCRYEFTGFNRTECQCPNCGEPLKVAGGKFIILTPPGTIDVQAIEVPTRQLED
>NZ_CP012375.1|WP_046661000.1|753762_754380_+|methylthioribulose-1-phosphate-dehydratase
MSDPRLSLVAAARRFYQLGWMLGTAGNLSAKVDDHSFWITASGKSKGKLTEQDFVRVDLTGKVRELAHQDNRPSAETSIHQVIYCLFPQAQACYHVHSVEANLVSRFAREDKLSLPPLEMLKGLGIWIENPQVFMPVFANYLDVPKIAAEIESRLSTFPPEIPALLISYHGVTVWGESLETTENYLEIVEYIFRYLVAAYQVKPW
>NZ_CP012375.1|WP_046663594.1|754632_754968_+|hypothetical-protein
MIINTRYLLTFIGLLALCLPVQANNTVYLSQSSNTATTFDSYRQECLQRARGEGLAADVAKDLCDCTIKKFQARYNLQQFRTLVQKSKTDKAAARTLASVGEACFDEILYE
>NZ_CP012375.1|WP_158524791.1|755160_762921_-|hypothetical-protein
MAVDAFYMLTGNPKGQVSTKLNGLGFTGTSSLLITYAENNPALLLGTIEHDLTDYLQDAGVTNLNTSLWGIADKAASALVMFAETLVSGYIPSEEEIFNVMGTRQLPTREMELRQTVTRLGNVSSTLATKLAMHYGNEDFGSQLIAATATKTLGGWLGDNLAYQLASVGSSIPARALYTRLYGNFTNTLLGFGSSAISQAFSEKFDIEDPLAQIAIDQVTASLTNHIFSGLTEAAFGKSFAVNYLGVDPYINLSLTKASIIGEVVNTGFGALQSFASTQLFNYVDKVWTGADLNNFGASIGGVIGGFIAPGIGNFLGSVIGGWAWDLIFDKDPRAYYSVYYNVAAGKFVSQFSFSADGGKTEVAQQMAQSASDTLQLIAGMIGGTPLSITATEYGHYEKEFVFNVGGSGRNSFSSIQAALDNGIIRQLKTLNIQAGDPYMKRLIALPSYNSDLKGLFTDLGVAKEYSVHKVDPILYGQAILNVDNADARKYLLDDWRRVQTRAKELTLDALPGDDGSEFIVGSDGSDDINAGVGNDLIYSDRGIDIINGGDGNDLLIIDYSSNQYAGSNVHPAGISYYDGFSQSYTCYYDDKDYSYDKVLFYSIEQFQITGTNGSDYIGTRDGNDTINGGGGNDTIEGGLGNDIINGGDGNDAIAAGGGSDVINAGTGDDTVANVSGDDIIDGGTGLDTISDLNYDSSNSAIILNELGGAATLLGTNIKNIERFGSVILGSGNDKIEFSSRFNNQEINSGQGNDTINGGLGIDIINGGDGNDLLIIDYSSNQYAGSNVHPAGISYYDGFSQSYTCYYDDKDYSYDKVLFYSIEQFQITGTNGSDYIGTRDGNDTINGGGGNDTIEGGLGNDIINGGDGNDAIAAGGGSDVINAGTGDDTVANVSGDDIIDGGTGLDTISDLNYDSSNSAIILNELGGAATLLGTNIKNIERFGSVILGSGNDKIEFSSRFNNQEINSGQGNDTINGGLGIDIINGGDGNDLLIIDYSSNQYAGSNVHPAGISYYDGFSQSYTCYYDDKDYSYDKVLFYSIEQFQITGTNGSDYIGTRDGNDTINGGGGNDTIEGGLGNDIINGGDGNDAIAAGGGSDVINAGTGDDTVANVSGDDIIDGGTGLDTISDLNYDSSNSAIILNELGGAATLLGTNIKNIERFGSVILGSGNDKIEFSSRFNNQEINSGQGNDTINGGLGIDIINGGDGNDLLIIDYSSNQYAGSNVHPAGISYYDGFSQSYTCYYDDKDYSYDKVLFYSIEQFQITGTNGSDYIGTRDGNDTINGGGGNDTIEGGLGNDIINGGDGNDAIAAGGGSDVINAGTGDDTVANVSGDDIIDGGTGLDTISDLNYASSNSAIILNELGGAATLLGTNIKNIERFGSVILGSGNDKIEFSSRFNNQEINSGQGNDTINAGLGIDIINGGDGNDLLIIDYSSNLFAGSTNYQGGIFYEFGGYYERYTCSYSNENFDQIRFSDIEQFQITGTNGSDHIVTRDGNDTINGGGGNDTIEGGLGNDVISGGDGNDAIAAGGGSDVIIGVKTGSTEPGKNEVDTLTGGEGRDTFILGDATSIFYDDGNTTNAGTSDYAIIADFNPTDDIIQIRRSSSDYLLTVSGSNTNLYINKPGSEPDELIAVINNQTALSLTASYFSYVSSPTLPSITLAVSPSSVTEDGTTNLVYTFTRTGSTTSALTANYTVGGTATLNTDYTRTGTNNTVTFAANSSTATITVDPTADTTVEPDETVTLTLASGTGYTVGTTTAVTGTIKNDDVTLPSITLAVSPSSVNEDGTTNLVYTFTRSGSTTNALTVNYTLGGTATLNTDYTRTGTTNTVTFAAGSSTATVTVDPTADTTVESDETVILTLASGTGYTIGTTTPVTGTIKNDDVTLPSITLAVSPSSVTEDGTTNLVYTFTRTGSTTSALTANYTVGGTATLNTDYTRTGTNNTVTFAANSSTATITVDPTADTTVEPDETVTLTLASGTGYTVGTTTAVTGTIKNDDVTLPSITLAVSPSSVTEDGTTNLVYTFTRTGSTTSALTANYTVGGTATLNTDYTRTGTNNTVTFAANSSTATITVDPTADTTVEPDETVTLTLASGTGYTVGTTTAVTGTIKNDDVTLPSITLAVSPSSVNEDGTTNLVYTFTRSGSTTNALTVNYTLGGTATLNTDYTRTGTTNTVTFAAGSSTATVTVDPTADTTVESDETVILTLASGTGYTVGTTTAVTGTITNDDFSQLSINNITVVEGQDSNAILTVTVNNPNPQPISVNYTTAPVNATANVDYTSKTGTLTIAANTSTATISIPILNDNLNEANETFAINLSNPVNATLTNNKGIVTISDTLTANVTTTLPANVENLTLTGTTNINGTGNTLNNIITGNSGNNILNGATGIDTLIGGLGNDTYQVDTTTDTITENANQGTDTVQSSVTYTLGNNLENLTLTGTANINGTGNTLNNVITGNSGNNILNGSDGNDTLIGGTGNDTLTGGAGGDQFTFNNRNEGIDTITDFLSSQGDKIAVSAAGFGGGLAAGVSITAAQFVLGTTALNASNRLIYNTITGGLFFDGDGTGTLAAIQIATLSSKPTLTASDILVLV
>NZ_CP012375.1|WP_046661002.1|763820_765047_-|ISL3-family-transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>NZ_CP012375.1|WP_046661003.1|765467_766478_-|hypothetical-protein
MKQTTANYDEPWKEALTEYFEAFLHFFFPEVHQLIDWTKIPESLEKELKRITASAKTKKRFADKLYKVWLLRGEEIWILIHIEIQSQYEENFPQRMYIYNYRAFDLYQKPVISLAILGDERVNWRPDSYNYTIAGCEVSLKFPTVKLLDYEENWSELETSSNPFAIIVMAHLKTKATTGKLPEREQWKWRLIRGLYEKEFEREQIIKLFEIIDNMMTLSPELQSSLESKIKQFEEERTMPLISNMELRGRKIGEEIGELRGIERGKEIGKEIGALENARDFVKKVLENRLGDIPGDIGQCLNDASVISVLEEMLKAALIVNSFEECRKSFSIIINK

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Crispr_ID: NZ_CP012375_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_4

1038172-1038271

TypeV-U4

Consensus_repeat	Method
TTGTCAAAAGACAAGCTGTCAAACTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_4

>merge|NZ_CP012375|4|1038172-1038271|CRISPRCasFinder
TTGTCAAAAGACAAGCTGTCAAACTTGGTGTAGAATGAATCAATGGGACAGTTAAAAGCAAACTTTTACTTTTTTGTCAAAAGACAGGCTGTCAAACTTG

>NZ_CP012375|4|4|1038172-1038271|CRISPRCasFinder
TTGTCAAAAGACAAGCTGTCAAACTTG	GTGTAGAATGAATCAATGGGACAGTTAAAAGCAAACTTTTACTTTT
TTGTCAAAAGACAGGCTGTCAAACTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_002732229.1\|1045945_1046149_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375932
NZ_CP012375.1\|WP_066029599.1\|1046145_1046415_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	unknown	unknown	gnl\|CDD\|224937
NZ_CP012375.1\|WP_002732729.1\|1037789_1038110_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|184253
NZ_CP012375.1\|WP_052275388.1\|1046921_1047179_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP012375.1\|WP_002731626.1\|1032465_1033548_+\|photosystem-II-q(b)-protein	unknown	unknown	gnl\|CDD\|130221
NZ_CP012375.1\|WP_046661236.1\|1035993_1037673_-\|DUF3352-domain-containing-protein	unknown	unknown	gnl\|CDD\|371750
NZ_CP012375.1\|WP_045358542.1\|1039122_1040850_+\|succinate-dehydrogenase/fumarate-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|180319
NZ_CP012375.1\|WP_071890162.1\|1040966_1041647_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367137
NZ_CP012375.1\|WP_046661235.1\|1035227_1035521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029598.1\|1041813_1045581_+\|NACHT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227922
NZ_CP012375.1\|WP_046661230.1\|1031397_1032288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_002733470.1\|1034974_1035238_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP012375.1\|WP_066029600.1\|1047165_1047390_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_002732833.1\|1047833_1048172_+\|XisI-protein	unknown	unknown	gnl\|CDD\|341357
NZ_CP012375.1\|WP_046661231.1\|1033816_1034329_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379256
NZ_CP012375.1\|WP_158524792.1\|1031051_1031240_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661226.1\|1029883_1030600_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340868
NZ_CP012375.1\|WP_071846420.1\|1034397_1034886_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP012375.1\|WP_046661237.1\|1038302_1038680_+\|plastocyanin	unknown	unknown	gnl\|CDD\|235060
NZ_CP012375.1\|WP_002800859.1\|1046681_1046915_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_002732229.1\|1045945_1046149_+\|hypothetical-protein	gnl\|CDD\|375932	pfam18506, RelB_N, RelB Antitoxin alpha helical domain. This is an alpha helix domain found in the N-terminal region of antitoxin RelB. RelE-RelB (RelBE) is a toxin-antitoxin (TA) protein complex. It is suggested that the toxic action of RelE is counteracted by antitoxin RelB, which wraps around RelE, blocks its active site and prevents sterically the binding to the ribosomal A-site.The long N-terminal alpha-helix of the tightly bound antitoxin RelB covers the presumed active site of the toxin RelE that is formed by a central beta-sheet.	1.82243e-11
NZ_CP012375.1\|WP_066029599.1\|1046145_1046415_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	3.04834e-08
NZ_CP012375.1\|WP_002732729.1\|1037789_1038110_-\|c-type-cytochrome	gnl\|CDD\|184253	PRK13697, PRK13697, cytochrome c6; Provisional.	2.05842e-46
NZ_CP012375.1\|WP_002731626.1\|1032465_1033548_+\|photosystem-II-q(b)-protein	gnl\|CDD\|130221	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B)). This model describes the Photosystem II, DI subunit (also called Q(B)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no structural data is presently available, a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0
NZ_CP012375.1\|WP_046661236.1\|1035993_1037673_-\|DUF3352-domain-containing-protein	gnl\|CDD\|371750	pfam11832, DUF3352, Protein of unknown function (DUF3352). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.	1.41702e-176
NZ_CP012375.1\|WP_045358542.1\|1039122_1040850_+\|succinate-dehydrogenase/fumarate-reductase-flavoprotein-subunit	gnl\|CDD\|180319	PRK05945, sdhA, succinate dehydrogenase/fumarate reductase flavoprotein subunit.	0
NZ_CP012375.1\|WP_071890162.1\|1040966_1041647_-\|hypothetical-protein	gnl\|CDD\|367137	pfam02668, TauD, Taurine catabolism dioxygenase TauD, TfdA family. This family consists of taurine catabolism dioxygenases of the TauD, TfdA family. TauD from E. coli is a alpha-ketoglutarate-dependent taurine dioxygenase. This enzyme catalyzes the oxygenolytic release of sulfite from taurine. TfdA from Burkholderia sp. is a 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase. TfdA from Alcaligenes eutrophus JMP134 is a 2,4-dichlorophenoxyacetate monooxygenase. Also included are gamma-Butyrobetaine hydroxylase enzymes EC:1.14.11.1.	0.00159586
NZ_CP012375.1\|WP_066029598.1\|1041813_1045581_+\|NACHT-domain-containing-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	8.79134e-39
NZ_CP012375.1\|WP_002733470.1\|1034974_1035238_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	1.46248e-14
NZ_CP012375.1\|WP_002732833.1\|1047833_1048172_+\|XisI-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	3.33036e-54
NZ_CP012375.1\|WP_046661231.1\|1033816_1034329_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	1.23677e-05
NZ_CP012375.1\|WP_046661226.1\|1029883_1030600_-\|hypothetical-protein	gnl\|CDD\|340868	cd06179, MFS_TRI12_like, Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters. This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.00856315
NZ_CP012375.1\|WP_071846420.1\|1034397_1034886_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.41711e-16
NZ_CP012375.1\|WP_046661237.1\|1038302_1038680_+\|plastocyanin	gnl\|CDD\|235060	PRK02710, PRK02710, plastocyanin; Provisional.	1.1168e-69
NZ_CP012375.1\|WP_052275388.1\|1046921_1047179_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	5.74279e-16

>NZ_CP012375.1|WP_002732729.1|1037789_1038110_-|c-type-cytochrome
MKRLLISLCLLLAVVTFGMARPALADGASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMPAFGGRLSAEDIEAVANYVLAQAEKGW
>NZ_CP012375.1|WP_046661236.1|1035993_1037673_-|DUF3352-domain-containing-protein
MKLRSFFYILGATVIILLVVATASFAWILADSPLSLLKGGVLREPMAAIFVPKQAPVMVSLLVNPERLESFGQLIATPANRRRSHQQIKDLEKSLLGKTGLNYQKEIKPWLGEEITLAVTSLDFDRDTDNGIQPGYLLAIQSKDGERAKEFLQASYSKQAVSGKFDLVFELYKGVNLIYQRPLTAGDNNRFLASAVVGDTVLFANNIKVLREALNNVQVPDLNLKNSPDYREALKNITEPRIAIVYGNLPPLSAWIANQPVPESPEAKQRLATAFTLKSGGIVAQTALIGVLGQDDQAPILSSPVGALSFIGENSLLVAASRDLNRFWTQVEEGLEADSPLQELITQVLNRFQSPLGLNLPEDVFSWVRGEYSLALVPSSKGMEPDSVFLGERVMGVEVDSAIEHLDELARSRGYNVVNLPLLDRTVTAWTKLTTAVPGGKAQLETLVTGVHTRVDNYEIIASSVEAMGLALSAQKNPILSSGKFRQAITALPAENDGYFYVDWRQLQPVIEAKFPIVRVLELSIKPLFNNLRSLTISSQGSENSVRRGTIFFNLGVKS
>NZ_CP012375.1|WP_046661235.1|1035227_1035521_-|hypothetical-protein
MNITDVQVNLSTSEDFLDSETLAQIDLMQQKIQQYLQTLSLENLKTILEFAAYLSDKESEQATQEIREIPNIIEKLKEAEMDLQSGHLIDWKNSDDL
>NZ_CP012375.1|WP_002733470.1|1034974_1035238_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MIYKVCLTAKANKVYSEADSVLRKKIAKCLKILQETPKNHPQIKALKGEFAGKYRFRVGDYRVIYIVDDSQSQVIVLLIEHRSQAYR
>NZ_CP012375.1|WP_071846420.1|1034397_1034886_+|IS630-family-transposase
MGLKPIIRKVWAPIGERPSALVHPRYEWLYVYGFVEPKTGKTLWYLIPRVNHQWLSLVYQSLAKDVVLSAEKIVLLVQDNAGWHRSQKLEVPDGIMLDFLPAYSPELQPAERLWSLVDEPLVNQYFETIEEIEEILITRCQYLETMTNEIKNLTNYHWLTYD
>NZ_CP012375.1|WP_046661231.1|1033816_1034329_+|helix-turn-helix-domain-containing-protein
MPKKAYLAEHLSSEELKDRYRASQDSVETRRWHLLWKISLGWTIKNAAVAVGLDYQYSFKILKRYNELGEEGVKNLKKKSHEHRRGKEPLLKEEQWQKLKEELKKRPADGGIWTGPKVARWIEKETGREKVWNQRGWDYLKKFRYSCQEPRPKHKNSNQLNQKNLSRISQ
>NZ_CP012375.1|WP_002731626.1|1032465_1033548_+|photosystem-II-q(b)-protein
MTTTLQQRESASLWEQFCQWITSTNNRLYVGWFGVIMIPTLLTATTCFIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLLGVFCYLGRQWELSFRLGMRPWICVAYSAPVSAATAVFLIYPIGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEIESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGFNFNQSILDSQGRVIGTWADVLNRAGIGMEVMHERNAHNFPLDLASGEQAPVALTAPAING
>NZ_CP012375.1|WP_046661230.1|1031397_1032288_-|hypothetical-protein
MTRQPHDQFAKQYLEELLSPLGKVEVSKEVADETRQVDIFFSPHPNMRGNAQFLGLLGQMVTTSTLLEPFRNAPNRTEIRNCILKLFSIFAELQRKGKREKTELNEDDLPRLWILATSISFQILESFDAKLELENWTEGIYFLSPSHRTAIIAINQLPITPDTLLLRLLGRGKTQSQAVRELLELPSGDSFRQNVMELLISWRVSVEINNLLESEDREVFMALSQSYLEWKEATKREGLQQGQRQIIENLMQVRFGELDESLIKVIDELLKLSPMESSRLLLESSREDLIRRFLSE
>NZ_CP012375.1|WP_158524792.1|1031051_1031240_-|hypothetical-protein
MPPDRTIPSNEEPIVARETDKATRFHFNKVAIASLLSITAKTFSGDNSSNIWTTEISKEQSP
>NZ_CP012375.1|WP_046661226.1|1029883_1030600_-|hypothetical-protein
MSSVFRLPPYFSPSVQRRVMKTLAAKKTRQFLTWAAACASFLILWAWNWQLVLATLTGVGAMIGVYHLQGQNWPSLWLWGRAFFSADSGKLTLAVVCGGLGSLATYLAVAIWTYAENRWLALASILQGFGTVLTLILLGWHFLDHRGQNESKNFDRWLEKLTVNDPLMRLMAVRRLSEMELSPSRREQCQEYFRYLLSRETDAQVRSALLDNFSGQETIKPQPLQIPLQVKKSLFKYD
>NZ_CP012375.1|WP_046661237.1|1038302_1038680_+|plastocyanin
MKKLGLLVATVVLVVSSFFFNTASAAAETFTVKMGGDAGTLQFDPPTLTIKAGDTVKWVNNKLSPHNIVFDSTKVPEAQASKLSHKGLAFSAGESFESTFSEPGTYTYYCEPHRGAGMVGTITVQ
>NZ_CP012375.1|WP_045358542.1|1039122_1040850_+|succinate-dehydrogenase/fumarate-reductase-flavoprotein-subunit
MKEHDVVIVGGGLAGCRAALEIKRLNPTIDVAVVAKTHPIRSHSVAAQGGIAAALQNVDPKDNPKAHAYDTVKGSDFLADQDAVDILTQEAPEVIIELEHLGVLFSRLEDGRIAQRAFGGHSHNRACYAADKTGHAMLHELVSNLHRNQVKIYDEWYVLRLILEEGTAKGVVMYQIATGQLEILRAKAIMFGTGGYGRVYNTTSNDFACTGDGLALSAKAGIPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEGRRFMEDYAPSRMELAPRDITSRAITLEIRAGRGVNLDGSAGGPFVYLDLRHLGREKIMSRIPFCWEEAHRLVGVDAVEEPMPVRPTVHYCMGGIPVNTDGRVRLSADTLTEGFFSAGECSCVSVHGANRLGSNSLLECVVYGRRTGKSIAKYVEKRAFPVFNPDIYLQDAKEEITALLTKKGTIRIGQLRQQFQDCMTQHCGVFRTEATMREGIKQIGELKRKYEQIYLDDRGDCWNTELIEAWELQSLMVVGEIILTSALNRQESRGAHSREDFPQRDDQNFLQHTLAYYSPSGIDIDYMPVVIQDFTPVERKY
>NZ_CP012375.1|WP_071890162.1|1040966_1041647_-|hypothetical-protein
MSSILTLSPFTQSTATLKNHLKKNGFFVFDNPCGDRWLQGLEDITQATPVIQTNGEIIYPIKANPDAMGKSDAQSPGIGLLPHTEWSYKAIPPKYLCLRCKTPDRWGGGATTLVKFDDLMRHFTLEEQHFMAAQPQYFMSKDGKESCFAPIWQRDAEIIRFSYNVLVYGEFSPDLSKPIASGLDFRLMAVCDKFLAMFEAYHVPLYLKLALLVMAGSGFEPLTFGL
>NZ_CP012375.1|WP_066029598.1|1041813_1045581_+|NACHT-domain-containing-protein
MSKERKQRGILATPTGKQKLQEAKANGRNELGKKLTYDNIAEKAVVDKKTVERFMRRLQLIDRDNALAICQALGLEITDVVDSDEWNYDESSNTEINWTEICQQALINKPLRRFATDEPCELEIFVPLGLVERKKQQRRPLNQEMERNQVYEVEEKEEITRRFEHEEFLNYIGLGTTQGESDKNIAIIGEPGAGKTTLLQNLALIISDQQKGLPICVSLGALSKERSLIGYLEETWLRDGLAVGEVKESDKADFRQLFDKKQVWLLLDGLDEYSADSPVEALTWIENEVRSGYLQKARVVVSCRVNVWDANINPLRAFVTYKTLDFADFQRDQFIRQWFGKKGNIALGEQLIACLQETGRERIWELVKNPLRLVLLCQIWSLGEGSLPETKAQFYQRYLPYFYEWKREIRDLTDNDELQELLHQALGKLAIASLGGESRYRMPRKLAKAIMGNDLFKLAVDFGWLNIVDRDQATDEAVYAFFHPTFQEFFAACGVEDWDFFLPRNHVDRPVEGKVYRIFEAKWKEVILLWLGRSDVKDEEKEAFIKALVEFKDGCGEWNLPEVDRGFYEYRAYFMAANGIKEFNTCSFADKIVHQIIKWNIVNDKPLYMTTGYKLDFGNHLKTHVNKVSSVSVYADHISVYYASLQETDTKRVISKLIDLSLENNSILENNSIIEFLEIIGQDNKNAIIALINMIESLSYNDEIRSHAIKSLGKIGKGNTEAISELINIIKSTSYNYEIRSHAIKSLGEVGKGNIEAISELINIIKSNESTFYFYNDKNGTLNHAVESLGKIGKGNIEAISELINMIKSTSYNDAIRSQAIKSLCEIGKGNTEAISELINIINSTSYNDKIRSRAAYSLGRIESGNSEAISALIRLMQSPDSKIVNFALKSLIEIGKNNSDIISILVDIMQSHSPDSKIGDFAIKSLVEIGKENSDMIPILVDIIQSHSIKATIVSTALENLAKIGQGNLQAINTLISILESLQSQDMSLQSEDMMSESCRSRDLILASAAESLGEIGQSDPRTIAVLIHALRPLYKNYFLMQKLATRSLIKIGINNSNVINQLVNSLQSLNDQESSYWWEIIILEDIGKRDKNVIKILKKLLLVASNNNHSYSHRIKLASALGKVEPGNSEAYETLIEIFISTQNLDAIKTLTEILEDKPISLVVAQKIGDYFVNNISKKMSISKKYYETIYAFFYKFTQIYSYGKFYEIWNNSFYAFQAVQINAVQINDEIDEVSAKLLQILEKYRKKPRKKQ
>NZ_CP012375.1|WP_002732229.1|1045945_1046149_+|hypothetical-protein
MNIKDYPFAQDLITDNQGQIQQVIINFEDYQQIIETYEDTGLYRAMIDVKDETPLTLEEALIELEKE
>NZ_CP012375.1|WP_066029599.1|1046145_1046415_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family
MKINYLPTFIKDLKDLKSTSSYSVIKNLVFTDILAVKQLSEINNLKKLKGEYNAYRIRIGDYRIGFFVEEDTITFARVLHRREFYRYFA
>NZ_CP012375.1|WP_002800859.1|1046681_1046915_+|hypothetical-protein
MSTTINLKITFESLTEAIKSLDLTQKQQLLEILEQQIFQAEETSYQDDEETLAELQQVRDEYQSGDYVTLEQYLSKD
>NZ_CP012375.1|WP_052275388.1|1046921_1047179_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MDYSIKISKSVQKQIDDLPNPIKSRILEKIKDLSIEPRPSGVVKLKNSDYEYRLRVGDYRVRYEIDDPKQAILILQCKHRRDVYR
>NZ_CP012375.1|WP_066029600.1|1047165_1047390_+|hypothetical-protein
MSIANNLETLRYFKSKLVFLAEIAHKTNRPELALSYCQQALELCQELGITLVKDCEELSGQIQGNLGDSDNNLK
>NZ_CP012375.1|WP_002732833.1|1047833_1048172_+|XisI-protein
MASLIAQYRQIIEKTFQDYADFLDTDHQIQIELVLDQTRDRYLLVETGWQNGYRIYGTLLHIDIIDQKIWIQHDGTEDGIADELVAAGIPQNQIILAFKSPEIRPYTGFAVA

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Crispr_ID: NZ_CP012375_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_5

1231116-1231531

Orphan

Consensus_repeat	Method
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	PILER-CR
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CRISPRCasFinder
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CRT

5 spacers

The CRISPR arrays of NZ_CP012375_5

>merge|NZ_CP012375|5|1231116-1231531|PILER-CR,CRISPRCasFinder,CRT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGAGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGTTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGTGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGTCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGGCAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACTGTTTCCAACTAATCCGATTTGACCTAATAGGTAAGGTTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAAGTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG

>NZ_CP012375|5|1|1231116-1231531|PILER-CR
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACT
GTTTCCAACTAATCCGATTTGACCTAATAGGTAAGG	TTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG

>NZ_CP012375|5|5|1231116-1231531|CRISPRCasFinder
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACT
GTTTCCAACTAATCCGATTTGACCTAATAGGTAAGG	TTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG

>NZ_CP012375|5|1|1231116-1231531|CRT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGT
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	TCCTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG	CAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACT
GTTTCCAACTAATCCGATTTGACCTAATAGGTAAGG	TTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAA
GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046661371.1\|1222452_1223283_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238817
NZ_CP012375.1\|WP_046661386.1\|1238440_1239244_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974
NZ_CP012375.1\|WP_046661387.1\|1240908_1242099_+\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|273938
NZ_CP012375.1\|WP_046661377.1\|1227766_1228378_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661384.1\|1236613_1237357_+\|anti-sigma-factor	unknown	unknown	gnl\|CDD\|315619
NZ_CP012375.1\|WP_066029660.1\|1237443_1238364_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_071846423.1\|1232276_1232501_+\|DDE-transposase-family-protein	unknown	unknown	gnl\|CDD\|379382
NZ_CP012375.1\|WP_002737442.1\|1234990_1235179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_002776995.1\|1239407_1240745_-\|Mur-ligase-family-protein	unknown	unknown	gnl\|CDD\|223840
NZ_CP012375.1\|WP_046661378.1\|1228512_1229178_+\|urease-accessory-protein-UreF	unknown	unknown	gnl\|CDD\|223900
NZ_CP012375.1\|WP_066029657.1\|1229405_1230356_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP012375.1\|WP_066029658.1\|1230361_1230952_+\|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl\|CDD\|236703
NZ_CP012375.1\|WP_046661373.1\|1224303_1225521_+\|ATP-phosphoribosyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|237043
NZ_CP012375.1\|WP_046661369.1\|1222069_1222438_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|177056
NZ_CP012375.1\|WP_081310256.1\|1234709_1235006_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368240
NZ_CP012375.1\|WP_046661376.1\|1227261_1227765_+\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	unknown	unknown	gnl\|CDD\|238451
NZ_CP012375.1\|WP_066029656.1\|1225606_1226119_+\|dihem-cytochrome-c-family-protein	unknown	unknown	gnl\|CDD\|378226
NZ_CP012375.1\|WP_066029659.1\|1233132_1234569_+\|DUF697-domain-containing-protein	unknown	unknown	gnl\|CDD\|206646
NZ_CP012375.1\|WP_046661372.1\|1223326_1224265_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|197617
NZ_CP012375.1\|WP_046663617.1\|1235533_1236226_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046661371.1\|1222452_1223283_+\|inositol-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	4.98823e-112
NZ_CP012375.1\|WP_046661386.1\|1238440_1239244_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	1.6359e-121
NZ_CP012375.1\|WP_046661387.1\|1240908_1242099_+\|trypsin-like-serine-protease	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.88636e-112
NZ_CP012375.1\|WP_046661384.1\|1236613_1237357_+\|anti-sigma-factor	gnl\|CDD\|315619	pfam12973, Cupin_7, ChrR Cupin-like domain. Members of this family are part of the cupin superfamily. This family includes the transcriptional activator ChrR.	9.4839e-39
NZ_CP012375.1\|WP_071846423.1\|1232276_1232501_+\|DDE-transposase-family-protein	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	1.1915e-15
NZ_CP012375.1\|WP_002776995.1\|1239407_1240745_-\|Mur-ligase-family-protein	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	2.22533e-90
NZ_CP012375.1\|WP_046661378.1\|1228512_1229178_+\|urease-accessory-protein-UreF	gnl\|CDD\|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	4.31806e-71
NZ_CP012375.1\|WP_066029657.1\|1229405_1230356_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	2.38914e-79
NZ_CP012375.1\|WP_066029658.1\|1230361_1230952_+\|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl\|CDD\|236703	PRK10502, PRK10502, putative acyl transferase; Provisional.	7.01182e-113
NZ_CP012375.1\|WP_046661373.1\|1224303_1225521_+\|ATP-phosphoribosyltransferase-regulatory-subunit	gnl\|CDD\|237043	PRK12292, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional.	5.61736e-145
NZ_CP012375.1\|WP_046661369.1\|1222069_1222438_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|177056	CHL00134, petF, ferredoxin; Validated.	7.55857e-23
NZ_CP012375.1\|WP_081310256.1\|1234709_1235006_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	2.15415e-07
NZ_CP012375.1\|WP_046661376.1\|1227261_1227765_+\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	gnl\|CDD\|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	3.79351e-63
NZ_CP012375.1\|WP_066029656.1\|1225606_1226119_+\|dihem-cytochrome-c-family-protein	gnl\|CDD\|378226	pfam09626, DHC, Dihaem cytochrome c. Dihaem cytochrome c (DHC) is a soluble c-type cytochrome that folds into two distinct domains, each binding a single haem group and connected by a small linker region. Despite little sequence similarity, the N-terminal domain (residues 12-75) is a class I type cytochrome c, that binds one of the haems, but the domain surrounding the other haem is structurally unique. DHC binds electrostatically to an oxygen-binding protein, sphaeroides haem protein (SHP), as a component of a conserved electron transfer pathway. DHC acts as the physiological electron donor for SHP during phototrophic growth. In certain species DHC is found upstream of pfam01292.	9.64707e-28
NZ_CP012375.1\|WP_066029659.1\|1233132_1234569_+\|DUF697-domain-containing-protein	gnl\|CDD\|206646	cd00880, Era_like, E. coli Ras-like protein (Era)-like GTPase. The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngB), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes, but is absent from archaea. The yeast member of TrmE family, MSS1, is involved in mitochondrial translation; bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA, which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and, since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family.	1.59e-39
NZ_CP012375.1\|WP_046661372.1\|1223326_1224265_+\|DnaJ-domain-containing-protein	gnl\|CDD\|197617	smart00271, DnaJ, DnaJ molecular chaperone homology domain.	4.92987e-10
NZ_CP012375.1\|WP_046663617.1\|1235533_1236226_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.00268e-25

>NZ_CP012375.1|WP_066029658.1|1230361_1230952_+|colanic-acid-biosynthesis-acetyltransferase-WcaF
MSPEIRTDEEAWLDLRTYDQSWFDRGRSHPIILLWWLVQGILFPLSLHQMDSFRCAILRLFGAKIGLGVKIRPTVRVTYPWKVAIGDYSWIGDDVVIYSLDNVTIGSHCVISQKCYLCTGSHDPGDRSFGLKTTPILIGNGTWIAADCFLAPGVKIGSNVVIGARSSVFADIPAQKVAWGSPCRPQYDRKMNSYSS
>NZ_CP012375.1|WP_066029657.1|1229405_1230356_+|glycosyltransferase-family-2-protein
MFSQSEKIPVSVLIPAKNEESNLPACLESVARADEVFVVDSQSSDRSIEISTNYGANVVQFHFNGRWPKKKNWSLDNLPFRNEWVLIVDCDERITPELWDEIATVIQDPNYNGYYLNRRVFFLGQWIRYGGKYPDWNLRLFKHKSGRYENLNTEDIPNTGDNEVHEHVILDGKVGYLKNDMLHIDFRDIYHWLERHNRYSNWEARVYYNILTGNDESGTIGANLFGDAVQRKRFLKKIWVKLPFKPLLRFILFYVIRFGFLDGKAGYIYGRLLSQYEYQIGVKLYELRQFGGKLNVNTHVNPSVKPSEPQPVEMIK
>NZ_CP012375.1|WP_046661378.1|1228512_1229178_+|urease-accessory-protein-UreF
MLDQKELLCLLQLASPILPVGAYSYSEGLETLVEKGIISNSASLNDWLERSLCQGSIRLETAVLLRVYRCFCQEDFTKLNYWDNWLSATRETAELRQQSWQMGRSLLNLLRELAPVRDNLPEQANYATAFAIGASHWQIGEELAVLGYLHSWASNLINAGLRLIPLGQTLGQSLLIGLQPSLLTATADIISLADENLSSWSWGLSFASMNHETQYSRLFRS
>NZ_CP012375.1|WP_046661377.1|1227766_1228378_-|hypothetical-protein
MSSREQHFLKINLVVLLLVLALIAGVDRAELPSSLLFYPPATPPTPIAGLLTHSFQFLCCLPPIVCLFSYALLSQEASFSNSRHFLLFSGIITGLFAINEIFRIHIILLYFNIPKFLTISVYGLAILIYGLVFWRHIRQTSYQILIIALALLTFAITIDLLQIKNRGFASLSEGIPKLLSAVNLASYFWDVCFQEISAKIKSQ
>NZ_CP012375.1|WP_046661376.1|1227261_1227765_+|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein
MTFIPHPDTAPLHLSCAVVTVSDTRTPETDRSGQIIQELLTRSGHDIGLYLIIPDEPLQIQAILSEISNQNRIKVLILNGGTGIAPRDTTYDALVPLLRITLPGFGELFRYLSYQEIGSRAMASRAIAGVYQNLLVFSLPGSTNAVKLALEKLILPEISHLVKQMNG
>NZ_CP012375.1|WP_066029656.1|1225606_1226119_+|dihem-cytochrome-c-family-protein
MPSIGQVKSIFFMLLFLLSILGGILLASLLQQPAIAQSPASDIVLNRYQIGQQTYLENCASCHIAIPPSILPSQTWKKILENPDSHYGIRLKPIVGITQRLIWDYLSYSSRPLRETTFVPLLIEQSSYVKVLHPRVNLPTPLGHTTCVSCHPNASRYDYQTLTPIWDNAA
>NZ_CP012375.1|WP_046661373.1|1224303_1225521_+|ATP-phosphoribosyltransferase-regulatory-subunit
MIHQPPAGTRDLLPLEVTQKGWINDRLQSVFQRWGYQRIVTSTIEWLDTLTAGGTIDPSTVIQLHGDSQGLSGLRPELTASIARSAVTRMSGESYPQRLCYRANVFRRPSASYHGRQVEFYQAGVELLFSGGLLADAEILLLLADCFDSLAVPNWQIILGEAGLTRSLLSPFPDPLREQVKRCLALLDYVSLENLPYPNETLRQQARQLFHLRGNPEDVLARVAVLAQEESAQKAVNNLKSLVELLNADRSEPFPLILDLSLIQTFDYYTGIVFKAVSDHQQNLSILGQGGRYDQLLGVFHPQGQSAPGIGFSLNIEELHESLLSGQTLPSQAPPLDWLLIPLGNNAQIATFSKARSLRNADPNLRVAIDLGGRSEAQIRTYARDRMIKNLAWVQEDGSVIEESL
>NZ_CP012375.1|WP_046661372.1|1223326_1224265_+|DnaJ-domain-containing-protein
MTFPISQGLFQYDLIDHFAILGVSIDAEQEEIRERYLKIAYKLHPDTCRTHTPDEKKLANQLLSKLVNPAYEHLGHDLSREEFRLVLGQMGKAMGKDLSKITISSEPARKLAQSSANYELAYQKILQSLAIDQYTALENTYQKIGQLSELNLVYLILTEGRGNKKTSPKVFISQSNTNQSELVRPAFTTAVQTKSKESPLEAYIRRAQASLDQNNPAQALRELRDALRQEPDNGICHALLGLAYLRQNQLSMARVHINRAWKASPQDATVIRCKRELDKAVNSNIEMQDQKEQKDEGERKGGFWSRFGGKKK
>NZ_CP012375.1|WP_046661371.1|1222452_1223283_+|inositol-monophosphatase
MPDTSSQLEKYLDIASEAALAAGTLILDNWGKIEKIEEKGRSGDLVTEIDRRAETEILKIIGRHFPEHGILAEESGKRPGTDSDYLWAIDPLDGTTNYAHGYPVSVVSIGLLIAGKAAVGVIYNPFRKELFRAAQGLGATLNRRPIHVSRTSELEKSLLVTGFAYDRCQTPDNNYAEFCYLTHLTQGVRRSGSAAKDLSDVACGRLDGYWERGINPWDLAAGVILIEEAGGKITAYDESPFLIETGRILATNGQIHTSLSQALQKAASWRVQFESF
>NZ_CP012375.1|WP_046661369.1|1222069_1222438_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MTKYYQITVHNRQTGEKITTTVPGDNYILHSLEKQGYQLPFSCRNGACTSCAVRVLSGDIYQPEAIGLSPELKARGYALLCVSYARGDMEVATQDEDEVYELQFGRFFARGKVRFGLPLDEE
>NZ_CP012375.1|WP_071846423.1|1232276_1232501_+|DDE-transposase-family-protein
MPKNLIYYLEKIPDFREPRGCRHRLSVVLLITILAIMSGELGYQAMSRFLERHRRNLSFVTRSAHIPYPLYISD
>NZ_CP012375.1|WP_066029659.1|1233132_1234569_+|DUF697-domain-containing-protein
MTSDPSLDRAWNTEDLEQALRGVGTIQEELNYNQARNSLSKLVERLDLTSIEKIGLEAEIDRLVALLEKLDRSLIQIAAFGLVGRGKSSILNALVGQEIFTTGPLHGVTRTIEGVNWQLSSDDTFPNLARLTLNGQGNAQVQLLDTPGIDEVDGQTREILACQVAQQVDLILFIISGDMTKVEFSALAKLREAGKPMILVFNKIDQYPEVDRLAIYEKIASERVKELLSPDEIVMVAASPLLTETVKAQDGRLKTQRFRGKPQIEALKLKILEILEREGKSLVALNSMLYADEVNEQIVARKMAIRDRGANQLIQKAVMIKASAIALNPVTVLDLFTGAVIDLAMILALSRLYGIDLTRQGAIALLQKIALNMGGISASEFLAVLGLSSLKGLLGLSIPATGGISLLPYTSIALTQAGVAGVSCYAIGQVTKTYLANGATWGPDGPKAVVASILDSLDETSILNRIKRELGSKLGGGG
>NZ_CP012375.1|WP_081310256.1|1234709_1235006_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MADRVNYRLVWSPKAIEDVDAIASYISRDSPSYAAAVVRRILDISYSLENCPLEAKKCAEFSDDTIREKSAYAYRLIYQIQGSVVIIAAIVHSKHFLD
>NZ_CP012375.1|WP_002737442.1|1234990_1235179_-|hypothetical-protein
MNSIRQKVESLLNQLPDDCSIEDIQYHLYVLEKVRQSLNAASLENTIPQEEVEGLLNKWLIE
>NZ_CP012375.1|WP_046663617.1|1235533_1236226_+|Crp/Fnr-family-transcriptional-regulator
MSSSVPSSDFIPLIGQETEIFNWAKSHYRNHTFAKDERVATRPGLLYFVESGAIRILGKAQVNVIDQKSCRQLPMADSEEVFLGFVGAGQPFEIVSQFPFQLQAQAHLDGTELVWLYWEDLEQWPQLRSAVMETFRHQYQRKLFWLSILGQKRSLDRLMGFLVLLLEEYGQPCLEGYYLPYTLTHAQIASAIGTTRVTVTRLIGKLRQQNSIFFKQDNLIGLPSLFLSQN
>NZ_CP012375.1|WP_046661384.1|1236613_1237357_+|anti-sigma-factor
MTAQSLWKPQKVHVNLLSRVSVLPTSLTWFQTNFTGIWFGCFESDHEIQDHPVTMLTRFYPGGFFPLHGHPGGEEILVLEGNFADETGVHPPGTYMLNPEGFIHRPYSEEGCLTFVKLRQHGGKTRQQVRTNIFNGSWQAGIVPEIKVQHLYEQADFSEKVWIERWLPNTQLVNVVETEIKEIFVIEGTWRDELGSYPVGSWLRYPPNCPYSPSSTTGCLIYVKTYPVTDTTARFVVGDDFQHPQAI
>NZ_CP012375.1|WP_066029660.1|1237443_1238364_-|hypothetical-protein
MTGKIIDRQTAGFLVLIIPLAVLIILVFTAWPLILLVFFLTLAVKVWQDYRWSKLSTVINPYFNQLLQDNQGCLTPIDLSAKANLTAKLARQFLDKKAEEFGAQKKAVGDKGMAYYFITASTLGSIFDESDPSLEEIEEKQVPAITASRSPLTNLEQSQEAKSPLIVAEKSENSVPEVAVISSSQPLTNLGKLFEEKEEENTAAISVQETVIQEPEEIINPSLNSSASSLFQSEAEVREESLTTVSETISSMSLADLAKRLGVTPAVLGRNKKNKSEAEFADWSRIRDPDGIAWKFDAKNSLFVAN
>NZ_CP012375.1|WP_046661386.1|1238440_1239244_-|type-1-glutamine-amidotransferase
MQELELKIGWLYPTLMSTYGDRGNVITIQRRCQWRDIPVTIIPLDAQTEADTFYQVDIIVGGGAQDRQQEIVMRDLQGKKAAAMKEQLSAGIPGVFTCGSPQLLGHYYEPAFGQRIEGLGLLDLVSKHPGPNAKRCIGNVVFEITASPLAEEIKAMTGEKPLVIGFENHGGRTYLQTVSPLGKVITGYGNNGEDGYEGAFYHNAIATYAHGPLLPKNPFLADWLIQKALEQKYQKPIFLTKLDDSLALKARFAMFERLELTSVTNKA
>NZ_CP012375.1|WP_002776995.1|1239407_1240745_-|Mur-ligase-family-protein
MQLFDRIRLGIAVAVAKTVTAVVKGLRLGAASVLPGEIARRLHPRLLPLLCGQVRRGVILVVGTNGKTTTSLLLRTILERQGAKVTHNTTGANLINGLITALLADANLFGTLKADYAILEVDENILPLVLKDCRPRAILALNLFRDQLDRYGEVDTISRRWQGAISPLPTDTLVILNADDPTLSHLGQQLPQRVVYFGLSEPELYLEEIPHAVDSIYCPKCGASLDYRGVYLSHLGDFSCPSCGFKKSNPAFHSHDWPQILIGVYNKYNTLAAGLVAQELGIKDREIFETVQGFKAAFGRAEELEIEGKKVRILLSKNPVGMNETIRAVADILQKEKSSTTLLVLNDRIPDGTDVSWIWDVDTEKLTRLGTTLVVTGDRLYDMALRLQYSQDSLAYPVNLIVESDLKKAIQIALNNTKNEETLHILPTYSAMLEVREILTGRKIL
>NZ_CP012375.1|WP_046661387.1|1240908_1242099_+|trypsin-like-serine-protease
MGLLTRLGISLGLLALGGAVGVLGNQYLSRKAPLEVNTPPAIVPASLSLPVIPQNDDNVNFIAQAVQKVGPAVVRIDSAREVADQIPEEFKQPFFRRFFGDQVPIPKEHWERGTGSGFIISTEGLLLTNAHVVDGTTQVKVTLKNGQTYQGKVLGVDNMTDVALVKIEAKNLPTVTFGKAETLTPGEWAIAIGNPLGLDNTVTVGIISALGRTSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIRADAQGLGFAIPIETAQKVAGQLSSKGKAEHPYIGIQMVTLTPELRQQLNETKELNFNIDQNEGVIVLRVVENSPAQKAGMQAGDIIETVAGNPVKTASDVQQGVETSAIGGNLEIEINRRGKQQTLTVQPGVFPSKTSE

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Crispr_ID: NZ_CP012375_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_6

1498096-1498215

Orphan

Consensus_repeat	Method
CTGATTCGGAGCATCTTTCAATTTGACAACGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_6

>merge|NZ_CP012375|6|1498096-1498215|CRISPRCasFinder
CTGATTCGGAGCATCTTTCAATTTGACAACGCCTATTGTAGGGCTAATTCATGAATTAGCCCTACACCTAGTAATTTCAGTTCCCATCTGATTAGGAGCATCTTTCAATTTGACAACGCC

>NZ_CP012375|6|6|1498096-1498215|CRISPRCasFinder
CTGATTCGGAGCATCTTTCAATTTGACAACGCC	TATTGTAGGGCTAATTCATGAATTAGCCCTACACCTAGTAATTTCAGTTCCCAT
CTGATTAGGAGCATCTTTCAATTTGACAACGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046661571.1\|1493233_1493737_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661577.1\|1501921_1502467_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|374761
NZ_CP012375.1\|WP_046661568.1\|1490742_1491423_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP012375.1\|WP_046661583.1\|1508446_1510276_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|315987
NZ_CP012375.1\|WP_046661572.1\|1493993_1495991_-\|magnesium-chelatase-ATPase-subunit-D	unknown	unknown	gnl\|CDD\|274135
NZ_CP012375.1\|WP_046661574.1\|1498221_1499505_-\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_CP012375.1\|WP_046661570.1\|1492332_1493223_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661580.1\|1505672_1505885_-\|DUF2839-domain-containing-protein	unknown	unknown	gnl\|CDD\|371332
NZ_CP012375.1\|WP_066029709.1\|1507365_1508196_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277331
NZ_CP012375.1\|WP_046661569.1\|1491569_1491968_-\|DUF1824-family-protein	unknown	unknown	gnl\|CDD\|370157
NZ_CP012375.1\|WP_066029708.1\|1506038_1507274_+\|LL-diaminopimelate-aminotransferase	unknown	unknown	gnl\|CDD\|181053
NZ_CP012375.1\|WP_046661575.1\|1499776_1500310_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|130771
NZ_CP012375.1\|WP_002743375.1\|1487779_1488613_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	unknown	unknown	gnl\|CDD\|180958
NZ_CP012375.1\|WP_046661573.1\|1496181_1497864_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029707.1\|1504441_1505377_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|215029
NZ_CP012375.1\|WP_046661578.1\|1502594_1503383_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661576.1\|1501085_1501619_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|130771
NZ_CP012375.1\|WP_066029706.1\|1489075_1490026_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|274884
NZ_CP012375.1\|WP_071890087.1\|1488797_1488971_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP012375.1\|WP_046661567.1\|1490130_1490748_+\|serine-acetyltransferase	unknown	unknown	gnl\|CDD\|223975

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046661576.1\|1501085_1501619_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|130771	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	8.06764e-15
NZ_CP012375.1\|WP_046661577.1\|1501921_1502467_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|374761	pfam16734, Pilin_GH, Type IV pilin-like G and H, putative. Pilin_GH is a family from Cyanobacteria. All the proteins are putatively annotated as being general secretion pathway proteins G and H, and are likely to be pilins of the type IV secretory pathway.	1.77852e-14
NZ_CP012375.1\|WP_046661568.1\|1490742_1491423_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.94277e-118
NZ_CP012375.1\|WP_046661583.1\|1508446_1510276_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|315987	pfam13424, TPR_12, Tetratricopeptide repeat.	1.25649e-05
NZ_CP012375.1\|WP_046661572.1\|1493993_1495991_-\|magnesium-chelatase-ATPase-subunit-D	gnl\|CDD\|274135	TIGR02442, Uncharacterized_protein_Rv2850c/MT2916, cobaltochelatase subunit. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (pfam06180). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis (TIGR02257/TIGR01650/TIGR01651). A number of genomes (actinobacteria, cyanobacteria, betaproteobacteria and pseudomonads) which apparently biosynthesize B12, encode a cobN gene but are demonstrably lacking cobS and cobT. These genomes do, however contain a homolog (modelled here) of the magnesium chelatase subunits BchI/BchD family. Aside from the cyanobacteria (which have a separate magnesium chelatase trimer), these species do not make chlorins, so do not have any use for a magnesium chelatase. Furthermore, in nearly all cases the members of this family are proximal to either CobN itself or other genes involved in cobalt transport or B12 biosynthesis.	0
NZ_CP012375.1\|WP_046661574.1\|1498221_1499505_-\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	2.36795e-91
NZ_CP012375.1\|WP_046661580.1\|1505672_1505885_-\|DUF2839-domain-containing-protein	gnl\|CDD\|371332	pfam10999, DUF2839, Protein of unknown function (DUF2839). This bacterial family of unknown function appear to be restricted to Cyanobacteria.	3.29987e-35
NZ_CP012375.1\|WP_066029709.1\|1507365_1508196_+\|metallophosphoesterase	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	6.81479e-57
NZ_CP012375.1\|WP_046661569.1\|1491569_1491968_-\|DUF1824-family-protein	gnl\|CDD\|370157	pfam08854, DUF1824, Domain of unknown function (DUF1824). This uncharacterized family of proteins are principally found in cyanobacteria.	2.84731e-63
NZ_CP012375.1\|WP_066029708.1\|1506038_1507274_+\|LL-diaminopimelate-aminotransferase	gnl\|CDD\|181053	PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated.	0
NZ_CP012375.1\|WP_002743375.1\|1487779_1488613_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	gnl\|CDD\|180958	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.	0
NZ_CP012375.1\|WP_046661575.1\|1499776_1500310_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|130771	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.23577e-14
NZ_CP012375.1\|WP_066029707.1\|1504441_1505377_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|215029	PLN00016, PLN00016, RNA-binding protein; Provisional.	2.8854e-151
NZ_CP012375.1\|WP_066029706.1\|1489075_1490026_-\|glycosyltransferase	gnl\|CDD\|274884	TIGR03965, glycosyltransferase_Rv0696_family, mycofactocin system glycosyltransferase. Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin.	1.47247e-36
NZ_CP012375.1\|WP_071890087.1\|1488797_1488971_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.82951e-06
NZ_CP012375.1\|WP_046661567.1\|1490130_1490748_+\|serine-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	9.82855e-46

>NZ_CP012375.1|WP_046661573.1|1496181_1497864_+|hypothetical-protein
MITTIIDRLTETNPQIMREWQGRLTPKNISIASVISLVGQLLVYLYYQNLLPVGAGFNRYCTANPPHNNDYDPYSGLKYCIQDLNGQWMIISRLWWLDVFTFLSITGIFALLVVGTYQLIADLSGEECRGTLNFIRLSPQPAKTIFIGKIFGVPILLYLVCLLALPFHLGAGLLAGIPLSLILAFYAVLIASCAFFYHAALSFALATPWLGGFQPWLGSAAVLIFVFYSSIITLSGYGGFRTPFDWLILFNPSFFLPYLVKSTFLPPDAVRYLGISQIFDLRWYGQSLWQSVIMGISLILLNFALCTYGLTRIIQRRFHNPLATLVSKPQSYWMMGCFSAISLGFVFQTLEPSYIFDNFAILSVFVAIFGLLILFALTPPRQTLQDWTRYRHLQGKKSISLGKALIFGEKSPSTLAMAVNLAIAILFILPAIFIAPLHQYKLATAAGFLLAMNMILVYAAIAQLLMLAGTNKRALLAATSIGILIIFPFLCFAVLRVDPSQSPLLWFFTFLPIAATKYATLPSFALAIFGQWLGLTLVGWQINRQLNRLGASATKALMPS
>NZ_CP012375.1|WP_046661572.1|1493993_1495991_-|magnesium-chelatase-ATPase-subunit-D
MPTVTLNFPLTAVVGQEAIKLALLLAAVDPALGGVVIAGRRGTAKSVMARAIHSLLPPIEIIAGNVFNCDPNHPDEWDDRTKEEYSSGEVATEVIRAPFVQIPLGVTEDRLLGSVDVEESVKQGEPVFQPGLLASAHRGILYVDEINLLDDQIANQLLTVLSEGRNQIEREGISFQHPCKPILIATYNPEEGDLRTHLLDRIAIALSADGVLSLDQRVTAVNQAIEYAVSPTAFIAQYAQEIDDLKTEIILAREWLKEVKIKPEQISYLVEEAVRGKVEGHRAEIFAVRVAKAAAALEGRDLVSADDLKRAVELVIVPRSLITPPPPEQEQQPPPPPPPPEPPQDENQQEQEEKEEEKEEEKEPEQPDNLPEEFVFDPEGVLLDPSVLYFAQMAQRQGKSGARNLIFSEDRGRYIKPMLPRGKVKRVAVDATLRAAAPYQKARRLRNPERHVIIEEGDLRSKRLARKAGSLIVFVVDASGSMALNRMQSAKGAVMRLLTEAYENRDQIALIPFRGERADVLLPPTKSITLAKKRLETLPCGGGSPLAHGLTQAVHVGMNARLSGDIGQVVIVAITDGRSNIPLAKSLGEPIPEGEKPDIKAELLDIAAKIRSLGIKLLVIDTEKKFVSTGFAKELALKAGGKYYHLPRATEQAIASMARGAIAGL
>NZ_CP012375.1|WP_046661571.1|1493233_1493737_-|hypothetical-protein
MSFRFDKILMSGVLAALLLVTSCAKAPSQFDQAQQESTARGAAAVVKESTSGGSFNQFFPPSGGGYERVYTQEKKGFAEAKLKQDGKVVAMLAISDISNNPAAANKFQDSQTTIKGFPSVKQGTTATAVLVNNRYQVKVLSREPDFTASDRQAWLAKFDLDGLAKLK
>NZ_CP012375.1|WP_046661570.1|1492332_1493223_-|hypothetical-protein
MSKPIFELVDELPTNNLTVKVLKTLDYVVPGQWDNLVGFKNTIIKVTGETDESMIQQIGDRAVWLFNDKSQGYQRALWLYQTIDSADNALAAASLANAVGGKIPLMGGLIERLTPAPEKAQTIDLTLKLVTELVAFCQINGIPGDSIRDFVASLGDYSGESLMRMAALVCLDGLIPLGGSFIRKVESSLSILRPEELESNSTFASIKELIPGGNTARKLDFIGQSFDSTKGWMSGFVSERSLSQQGLLSKIQGFIDFSADKLVYVGAFLDMTTNYYEHTGIQTLARRLIERAVAEI
>NZ_CP012375.1|WP_046661569.1|1491569_1491968_-|DUF1824-family-protein
MSMEEALKLLKEYGCIQLKIAQSPEEEEALRQAILLVNQGSESINLGICADNNEEGFKALKSYLQALGYPLPNILPEDHPEQRAVYIKYNTQRQASYLDSYTGTYRGVLISCQSENDQLVGTYGHFPLDLFS
>NZ_CP012375.1|WP_046661568.1|1490742_1491423_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MYLLIPAAGMGKRMGSDRNKLLLTLHGKPLLAWTLLAAMESRAIIWIGIMAQPEDFEEIREIITAINALKPVQIIQGGETRQKSVYNGLQALPEGAETVLIHDGARCLATPELFDRCAAALATCQGFIAAVPVKDTIKIVDSKGWIEDTPDRSRLWAAQTPQGFQVKLLKECHEQGRKLAWEVTDDAALLEKCGFPVKIVVGEETNLKITTPGDLAIAEYILSQRL
>NZ_CP012375.1|WP_046661567.1|1490130_1490748_+|serine-acetyltransferase
MKSFFRKLFFYVGILWLSPLIIAFQVANNRELILGDVRRWVELLGWEKRSDWLQLLALCLEAKEFRNLYYCRLFQGGSFSRFLMYILRFFYRESSYLFLDSSCSIGKGLFIQHGFSTIVMADLGDNCWINQQVTIGYKDKSGRPKIGNNVRITAGAKVLGNITIGDNVTVGANSVVVKDVPPNCVVVGIPARIIKRDGVKVDEKL
>NZ_CP012375.1|WP_066029706.1|1489075_1490026_-|glycosyltransferase
MSNTLQFLPEVSVIVPIYNGEKDIPSLIDCLAKQTYPRQLVEYILVDNNSGDRTGELLGKAAEEHRGLNLIILSENHIQSSYAARNKGIKSARYPFLAFTDADCRPAAQWLTELVQPFKYTRIGLVAGEIAALTGSTWLEKYAERRHFMSPKFLLEHSFCPYGQTANLAIRREAFEKVGLFRPYLTTGGDADICWRIQQQTDWQLTYAPEAIIYHRHRSTLEDLRSQLKRYGRSNRYLHELYGVELMRPLTNQELFFTLGRWLLKELPKNTLKLLFGKADIVDLLATPLDLIGFQCRSQGQATAKLPEKAKEIEWL
>NZ_CP012375.1|WP_071890087.1|1488797_1488971_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MSTINKTKLELLEFYLGLKYPITIYPDDEGGYVSEIKDITRCFTQGKNLEETLISKQ
>NZ_CP012375.1|WP_002743375.1|1487779_1488613_-|1,4-dihydroxy-2-naphthoyl-CoA-synthase
MSVEWQSVKTYEDILYHKWGGIAKITINRPHKRNAFRPKTVFELYDAFCDAREDARIGVVLLTGAGPHSDGKYAFCSGGDQTVRGQAGYIGDDGVPRLNVLDLQKLIRSIPKVVIALVAGYAVGGGHVLHLVCDLTLAADNAIFGQTGPKVGSFDGGFGSSYLARVVGQKKAREIWFLCRQYNAQQALEMGLVNHVVPVEELEQEGVKWSLEILEKSPLAIRCLKSAFNADCDGQAGLQELAGNATLLYYMTAEGAEGKQAFLEKRPPDFSQYPWLP
>NZ_CP012375.1|WP_046661574.1|1498221_1499505_-|TldD/PmbA-family-protein
MTIDPQQLIELALKSGAVAAEVYQSSSLSHPVFFEANRLKQLESSESVGTALRLWREGCPGLAVGYGDVEPEILVETALNLSYLNAPEEIEFSAPRRAVYDPIGQDVAVESLIAMGNQMIGHIRQVYPEVICSGEWECEREITRLVNSEGLYCQYTDTALSYYLGIEWVRGEDFLAVYDGEYTRSTPHPETVIKQLLQRLQWAANNVDSPTGKLPILLTSNAVTLLWGTVEMALNGKQILEQSSPWSDKIGQLVMSEKLTLSQQPDREPYSCPFDDEGTPTKFLSLIEGGRVKEFYSDRTTARLLKTTPTGNGFRPGLGVYPMPDLVNLIVAPGEGTLEDLISQIDEGLVIDQILGHGADISGDFSVNIDLGYRIEKGKITGRVKDTMVTGNVYTALQNLIALGADNQWNGSCYTPSLIVDSLSVVR
>NZ_CP012375.1|WP_046661575.1|1499776_1500310_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MNSAFKFKLIQALNKKNGNKGFTLIELLVVVIIIGVLAAIALPNLLGQVAKGRQAEARTNLGVVNRAQQVYRLENTTFGTVSQLPVQFTLTYYTSVSNVSNDANGAEAHMAPAANYVNDILEYGSAVSQTTAGVFTAVICEQATPATSTALTAGVLTTAGTASTDAACDATTARPVQ
>NZ_CP012375.1|WP_046661576.1|1501085_1501619_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MNSAFKFKLIQALNKKNGNKGFTLIELLVVVIIIGVLAAIALPNLLGQVAKGRQAEARTNLGVVNRAQQVYRLENTTFGTVSQLPVQFTLTYYTSVSNVSNDANGAEAHMAPAANYVNDILEYGSAVSQTTAGVFTAVICEQATPATSAALTAGVLTTAGTASTDAACDATTARRVN
>NZ_CP012375.1|WP_046661577.1|1501921_1502467_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MKYLLFLAIKSQGKKATGFTLVELLVVVIVLGVLTAVGLPNLLQQVAKGRQAEAQAILGQINRAQVAYRLENPTFANLTQLPISGINNARYYSFSDYDVVPTNATRSSYRAQALDPFRNDIKNYAGGVRLINGRFFTLICEAITPLQDSVFVDGSGACSSDSIGFNNDSQGTNQPSQGGPM
>NZ_CP012375.1|WP_046661578.1|1502594_1503383_+|hypothetical-protein
MLGAKKSLNLSLLKTLGLVAVIGGLIMAIVEMQQEKVKTLTKEKLLERNYSQESRLENAQVELLKNMPAFGFDNMLANWSMLQFIQYYGDGDARRETGYGLSPDFMEIVTKNDPKFVRAYLMMSVPSSLNAGKPERTVEIMNKGLSKLTPDVTDAYFIWLYKGVDELLFLGDIPAAKKSHQMAADWAKIAGNKFIEKSARGTVKFLETNPDSRAPRVGAWMLVWLNSQNEETRKLARENIEKLGGKLLVFGDNQVMAIPPKD
>NZ_CP012375.1|WP_066029707.1|1504441_1505377_+|NAD-dependent-epimerase/dehydratase-family-protein
MKILIMGGTRFIGVSLTKVLVEQGHEVVLFNRGNKPAPVAGVRQIHGDRTDSAQLKEKLKNESFEAIFDNNGRELSDTQPLVEIFRDRIGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQVYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLASGRDRQEIDLAIDDQILANQ
>NZ_CP012375.1|WP_046661580.1|1505672_1505885_-|DUF2839-domain-containing-protein
MGESKRRQSALGDKYGQEENILPWLPITKSQASQAYKLTTRGAWIGIGVLAGVWLVIRFVGPAFGWWNVQ
>NZ_CP012375.1|WP_066029708.1|1506038_1507274_+|LL-diaminopimelate-aminotransferase
MATINSNYLKLKAGYLFPEIARRVQAFAAANPDANIIRLGIGDVTEPLPLACREAMIKAVQEMGDRSSFKGYGPEQGYAWLREKIAVHDFQARGCDISADEIFISDGSKCDTGNILDIFGDNNSIAVTDPVYPVYVDTNVMAGHTGEVNDRGEYEGLIYLPITAENNFTAQIPAEKVDLIYLCFPNNPTGATATKEHLTAWVNYARANGSIIFFDAAYEAFITDASLPHSIYEIEGARQCAIEFRSFSKNAGFTGTRCALTVVPQSLMAKAADGTDVQLWKLWNRRQSTKFNGVSYIVQRGAEAVYSPEGQAQVEELVKFYLQNATIIREKLTAAGLEVHGGVNAPYVWVKTPQGLSSWDFFDKLLHTCNVVGTPGSGFGAAGEGYFRLSAFNSRANVEAAMERIIDKFQG
>NZ_CP012375.1|WP_066029709.1|1507365_1508196_+|metallophosphoesterase
MRPFWLESLQVERLTIAIASLPAALQGIKLVQWSDLHCDEQHLPVAVLQEAIAITNQEKPDLIFLTGDFITYSPSPIFALVESIKALKSQGGIYACLGNHDSYLPQARETVISALTSVGIRVLWNEIATPYGENFPIVGLADYWSGEFLPQILEQISPDIPRLVLSHNPDTAMVLRDLRVDLQLSGHTHGGQVTIPGMGSLPIVLEELRRSLPEPYRPWVPFHRQFSRVVRYWQWSEGFHRVGENQLYVNRGLGTYFPGRLFCPPEVTVITLINGS
>NZ_CP012375.1|WP_046661583.1|1508446_1510276_+|tetratricopeptide-repeat-protein
MTENRDNFNETYKALIERIVNLTLEGKIRAKSQVYNLLSEGVKNGTGEIFERCLTEKIIFTRSQLETKIKATRVLRALETIESEWEKYQKTNQQNSLTAAAINNLVKIDREDRLLTLVNLIDPNQNNALTLEQLQQLAKHLQTVAQQRGEADLWQIATGINLGLNTWLNLSNDLTSWLYEQNRNLGFTNDNERVTPWQIWASKVNPSWLKRVLESLANQQAFDSLTQDLTLADWVETAIVFQYIQRGLINFFDQRIYSEKLGAKLSISTFLTFALIWSLLTNSFEQVSKNSLYSRGCFQMALQILRTFAQRDYFPLYGGIFASFSGSYLKEALDYLSIPLRYVEGTGEKARILTLIAYSNRIRGDYPQARECHQQALEIARQQQDSACEIANLNHLSRLNAIQKNYTEAINLSQRALILSRQQGNSLGQANALANLGYSQVQEAQQLERYDPEIFPSSIEYLQQGLKLAESLQDWQSKSLCCSSLGLAYIILERPQDAINILLQGLESAKYYGDLYLQGLLLTYLGEAYYQDKNFEQAIYMGSLGMYWLHEIGAAEWRQAASLLTVIRGKNIAAFEQTFSHERSSLIKSIGLEGYQYISEILSKYQQGN

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Crispr_ID: NZ_CP012375_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_7

1690347-1690463

Orphan

Consensus_repeat	Method
ATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_7

>merge|NZ_CP012375|7|1690347-1690463|CRISPRCasFinder
ATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTCACGGTTGCTGGTTCTCCTATTGATAATAGCGATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTC

>NZ_CP012375|7|7|1690347-1690463|CRISPRCasFinder
ATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTC	ACGGTTGCTGGTTCTCCTATTGATAATAGCG
ATCGATCTTTGTGTCCTCTGTGTCTCTGTGGTTCTTTCCACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_066029743.1\|1690549_1693522_+\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NZ_CP012375.1\|WP_004268201.1\|1688335_1688575_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661737.1\|1696198_1696870_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293813
NZ_CP012375.1\|WP_066029742.1\|1688571_1688979_+\|putative-toxin-antitoxin-system-toxin-component,-PIN-family	unknown	unknown	gnl\|CDD\|129405
NZ_CP012375.1\|WP_046661740.1\|1700366_1701044_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP012375.1\|WP_004268212.1\|1693630_1695067_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP012375.1\|WP_080949727.1\|1696974_1698459_+\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100081
NZ_CP012375.1\|WP_046661728.1\|1684993_1685368_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661736.1\|1695070_1696039_-\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|235583
NZ_CP012375.1\|WP_046661738.1\|1698615_1699248_+\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP012375.1\|WP_046661741.1\|1702257_1703172_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP012375.1\|WP_046661739.1\|1699275_1700364_+\|calcium/proton-exchanger	unknown	unknown	gnl\|CDD\|273043
NZ_CP012375.1\|WP_004268200.1\|1687998_1688244_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029744.1\|1701524_1702172_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP012375.1\|WP_046661727.1\|1684063_1684951_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012375.1\|WP_149039021.1\|1688240_1688336_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350221
NZ_CP012375.1\|WP_046661726.1\|1681956_1682904_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|316753
NZ_CP012375.1\|WP_052734170.1\|1687756_1687978_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP012375.1\|WP_004268195.1\|1683238_1683946_+\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225516
NZ_CP012375.1\|WP_046661729.1\|1685717_1687754_+\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046661739.1\|1699275_1700364_+\|calcium/proton-exchanger	gnl\|CDD\|273043	TIGR00378, cax, calcium/proton exchanger (cax). [Transport and binding proteins, Cations and iron carrying compounds].	6.26926e-142
NZ_CP012375.1\|WP_066029744.1\|1701524_1702172_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	8.01075e-66
NZ_CP012375.1\|WP_066029742.1\|1688571_1688979_+\|putative-toxin-antitoxin-system-toxin-component,-PIN-family	gnl\|CDD\|129405	TIGR00305, TIGR00305, putative toxin-antitoxin system toxin component, PIN family. This uncharacterized protein family, part of the PIN domain superfamily, is restricted to bacteria and archaea. A comprehensive in silico study of toxin-antitoxin systems by Makarova, et al. (2009) finds evidence this family represents the toxin-like component of one class of type 2 toxin-antitoxin systems. [Cellular processes, Other, Transcription, Degradation of RNA].	2.3737e-20
NZ_CP012375.1\|WP_004268212.1\|1693630_1695067_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP012375.1\|WP_080949727.1\|1696974_1698459_+\|site-2-protease-family-protein	gnl\|CDD\|100081	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains.	9.25694e-61
NZ_CP012375.1\|WP_046661737.1\|1696198_1696870_-\|hypothetical-protein	gnl\|CDD\|293813	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YmaE and Nostoc all1228 proteins.Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. .	5.28374e-19
NZ_CP012375.1\|WP_046661736.1\|1695070_1696039_-\|thiamine-phosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	8.74679e-132
NZ_CP012375.1\|WP_046661738.1\|1698615_1699248_+\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	7.65105e-26
NZ_CP012375.1\|WP_046661741.1\|1702257_1703172_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.26767e-07
NZ_CP012375.1\|WP_046661740.1\|1700366_1701044_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	9.88571e-69
NZ_CP012375.1\|WP_066029743.1\|1690549_1693522_+\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	1.25413e-89
NZ_CP012375.1\|WP_046661727.1\|1684063_1684951_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.48905e-31
NZ_CP012375.1\|WP_046661729.1\|1685717_1687754_+\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	2.86209e-74
NZ_CP012375.1\|WP_149039021.1\|1688240_1688336_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350221	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Pyrobaculum aerophilum proteins, Pae0151 and Pae2754, and homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	0.000495375
NZ_CP012375.1\|WP_046661726.1\|1681956_1682904_-\|hypothetical-protein	gnl\|CDD\|316753	pfam14261, DUF4351, Domain of unknown function (DUF4351). This domain is found in bacteria, and is approximately 60 amino acids in length.	0.00809085
NZ_CP012375.1\|WP_052734170.1\|1687756_1687978_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	9.84483e-13
NZ_CP012375.1\|WP_004268195.1\|1683238_1683946_+\|SIMPL-domain-containing-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	7.61341e-45

>NZ_CP012375.1|WP_066029742.1|1688571_1688979_+|putative-toxin-antitoxin-system-toxin-component,-PIN-family
MKVVIDTNVVISAAIADRNPEKIILFVVSNPDFYWIVSPDILAEYREVLSRKRLKLTNEQKQYWLTLASAVTFVIDINLEIDFPRDRKDAKFLACAIVNNADYFITGDKDFDEVKNLGHTKIISVSLFQTKYQIK
>NZ_CP012375.1|WP_004268201.1|1688335_1688575_+|hypothetical-protein
MNIYQKTLVIQDPNQLVLSDLPFQKGQQVEVMIIAKNYDREALANKLRDFFKEVQALHADNPLTEEEIEAEIEDYRRGK
>NZ_CP012375.1|WP_149039021.1|1688240_1688336_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MTSFVVDANVAIKWVLTEIYTDNGSRLLSPQ
>NZ_CP012375.1|WP_004268200.1|1687998_1688244_+|hypothetical-protein
MPVIKLRSHIGEDGMLHLDIPPEFKGQEVDVTVTVEPITEEKTKTKETLSQARERFAKVREHFQGRNFLDSTELLREDRQR
>NZ_CP012375.1|WP_052734170.1|1687756_1687978_+|Uma2-family-endonuclease
MTLREKMREYLENGLQLGWLIDTKSKTVEIYRANQEVEVLHNPTHLSGENILTDFVLDLDDPPHPPSKGGRSK
>NZ_CP012375.1|WP_046661729.1|1685717_1687754_+|SAM-dependent-DNA-methyltransferase
MNNFGDKVSFIWSIADLIRDTFKRGKYQDVILPFTVLRRLDCVLEPTKEEVLAAYHQYKDKLDNLDPLLCKKSGFAFYNSCPYDFEKLLDDPKQLAANLKLYINSFSGNMREVLEKFDFANTIDKLEQSDLLFLVTERFQNIDLHPDKVSNLEMGYIFEELIRKFNEALDENPGEHFTPREVIQLMVNLIFSPDKTQLSQEYITRSVYDPCCGSGGMLTIAKDRILELNPKAQVFLFGQEVNPETFAVCKSDLYMKSVDGKDAENIKFGSTLSQDQHSDKTFDYLLANPPYGKDWKRDKEAVETEAQKAGSRFSAGTPRISDGQLLFLQHMIARMKPETQGGSRVAIVMNGSPLFTGDAGSGESEIRRWILENDWLEAIIALPNDLFYNTGIATYIWVLTNHKAAERRGKVQLINASEFWLPMRKSLGSKRREISSQHIREITEIFQSFQPSEVSKIFDREDFGYRKITVERPLRLNFQASPERIERLKEQSAFASLAVSKKKSDEMKGIEEQAGKEQQRLILDILNSFPDTLYQDRGEFEKVLKKGMKTKGITLAPAVYKAILSALSERDESANICLDKQGNPEPDTDLRDTENVPLKQDINDYFDREVLPHVTDAWISDTVRDIRDGALGKVGYEINFNRYFYKYQPPRTLEAIEADIKEVEGEILAMLTSLEERI
>NZ_CP012375.1|WP_046661728.1|1684993_1685368_+|hypothetical-protein
MKFLPIALATFSLLSLSVNIPPTVATQQLFCRGRMNNGWSYSAEFINGRFERIRWTRSGQPPQVSSLSFKNTNNKGQPIYRGSLFAAVSVTLIDLSKGDVRPGSQISVGVEEWGWSRGNCGFNS
>NZ_CP012375.1|WP_046661727.1|1684063_1684951_+|alpha/beta-hydrolase
MNYPNFLPTVREGLSEDTSLALLENIQQIAIDSPIYPRSILTTYSQQGQGQPPFVLLHGFDSSLLEFRRLLPLLAQNRETWAIDLLGFGFTERYPDLQVSPKTIKSHLYHFWQTAIAEPIILVGASMGGAVALDFALSHPEIVAKLVLIDSAGLANPPVLGKLMFSPLDKWATNFLANPRVRQNISRTAYFDATLATVDACTCANLHLNCPHWSEALISFTKSGGYGAFLPKLSQINRETLIIWGENDQILGTKDAKIFQQALPNNQLVWIPRCGHVPHLEKPELTAAAIVKFAN
>NZ_CP012375.1|WP_004268195.1|1683238_1683946_+|SIMPL-domain-containing-protein
MNYRKFCLAFLLSLILINTGLVMPSYANERELRTITVTGEGIENIATSQAIVRLGVEIQGKEAGKVQRETANRSDAVVKFLRSRQVEKLETTGISLQPNYDFSNNQRRLIGYIGANLISFQVDIAQAGILIDEAVKVGATRIDGVSFTAGESAIAAAQRTALIKATEQAREQATIVLQALGLVPKETVSIQVGNTSNPVPIARSEAVFRSADAASSPVIGGEQTLRAAVTLEISY
>NZ_CP012375.1|WP_046661726.1|1681956_1682904_-|hypothetical-protein
MTRQIHDQFAKEYLEELLASLGTIKKSKKVKSEVQEIDVWFEPASSASRTELPLGILAKMAATCCLFEPFRNPPSEVEIRSCISKLYAVHGEVLRKAKRTNKTLTEAELPVLWILTPTFSARMIEEVVGIPPSFLPEEGMKEEWGKGVYFSPSLFKTGIVAIHQLPVNEETLWLRVLGKGGTQKRAVEELVQLPEGNPCQENLLEILANWRKSLELRDNLSAEEQEDIMNLSPAYLQQREEWKQEGIQEGIQRGSLEGQLSLITSLLEGRFGSLDAELSGLVEQIAQLPISERTGLLLSLANLSRSELLERFREN
>NZ_CP012375.1|WP_066029743.1|1690549_1693522_+|type-I-restriction-endonuclease-subunit-R
MIDTSEKNFEATIEASLLNSGYQRRSSKDYERSLCLIPEDVLNFIQTSQPQEWQKFQTQYGDDANTQLLKQLAEVIKNRGTLEVLRKGIKANSCRFQLAYFQPPSSLNPETQRLYQTNCFSVLRQLYYSQKNPLNSIDIVLFLNGLPIFTAELKNPFTGQNFQQAIKQYQEDRDPREPLLKFGVCLSHFAVDPDQVHVTTHLQGHETGFLPFNPGKTGVAANPDPTKFRSAYLWEQIWRQDSFLDLIQNFITLQEKKDDKDRKTGVKSLIFPRYHQLDAVRRLLADAKAEGTGKSYLIQHSAGSGKSNSIAWLAHGLVSLYDDHNSRVFDSIIVITDRRILDQQLQATIRQFEQTSGVVENIDKTSRQLKEALESGKNIIVTTLQKFSVIVDQIQSLSGQRFAVIVDEAHSSQTGESTKKLKSVLTATSLEAAAAEEGGEEEDLEDRIVSEAKKRGKIANLSYFAFTATPKPKTLEVFGTRQPDGSFAPFSLYSMAQAIEESFILDVLENYTTYKTYFNLLKTIEDDPHYDRARTASLLRHFVDLHEHTIKQKVAIIVEHFHEQVAHQVQGKAKAMIITRSRLHAVRYKLALDRYLKEKDYPYQSLVAFTGTVRDGEDFTETKMNSASSGTHIPDKATADTFQQAPYRFLVVANKFQTGFDQPLLGAMYIDKKLAGVNAVQTLSRLNRIHPHKTGTLVLDFANEADEIEAAFKDYYDCTILTEATDPNRLYKIQAQLDDYHFYQDSDIDSFAQIFFHPQGTQAKLHGSLDPVLDRYLEASEEEKVGFRGKLQEFIRLYGFVSQLLPIPAADLEKFYEFCRHLICKLPTSPEALPLPIQQSIELNSYRIQETHRGKIELKRGVRETSRVYSLGTGQPPTKKIEPLSKIIEEINRRFGTDFSEDERVFIEHLETKLDDSAPLKASLKINTPENVKLAFDILASDIMQDMVEINFSFYKKFTDDLEFKALLLGFLFNRFLQRSNTSEAKTDSV
>NZ_CP012375.1|WP_004268212.1|1693630_1695067_+|signal-recognition-particle-protein
MFDALADRLEDAWKKLRGQDKISSANIQETLKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITLGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKIVKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFNDFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDLLAKSPNRRRRIAKGSGHPETEVNKLITNFTRMRSMMQQMGRGQMPAMPGMPGMGGGMFGGGNQPGFRGQGGSPKKPKKIKKKKGFGDL
>NZ_CP012375.1|WP_046661736.1|1695070_1696039_-|thiamine-phosphate-kinase
MNLTVKDLGEQGLLPILQKYCPAEIIGDDGAILSLKEGYSLVVTTDVLVNNVHFSDLTTSPEDVGWRAAAANLSDLAAMGAEPLGITVGLALTPNLAIDWLEGLYRGLSSCLQVYQTAIVGGDVCRATEINISITALGQVAKNEEIRRFNAKVGDSIVITGYHGLSRAGLELLLHPETGRNLNSAQKKRLIQAHQRPRPRLDCIPHLQKIVKQFPIAGMDSSDGLADAIMQICRCSGVGAEIERIPLHPTLKEYVGAEKALEWALYGGEDFELVLCLPPDSARELLEKVGEEGAIIGQIVPGKEIKLADGRNLSLSSGFQHF
>NZ_CP012375.1|WP_046661737.1|1696198_1696870_-|hypothetical-protein
MRSETESSPLEVSKTTKPPRLILEGLYAFSPNRETLGGTSYLIVENTGNILVDCPSCEESERDFLREKGVRYLFFTHRGGQGKQSDSLQSLLNCEIILQEQEAYLLPHRQITVFQQQIQLSPTCSGFWTPGHSPGSSCLYWNRHGGVLFTGRHLLPDTKGQPRPLQTAKTFHWLRQLRSQRAILDRFSPETLSYLCPGANTGFLRGRGIIDSAYEKISANLLN
>NZ_CP012375.1|WP_080949727.1|1696974_1698459_+|site-2-protease-family-protein
MEMWLLLGILGGFTYFIVKRSVAKITTTPIWLIWLVLMTPALIWTGWTLIYGEDTPMPAFLLIGPFVICPFLYWWLVQKGRVTPQESPPSPLETANLVLENIDNPAPKNDLKPITAAEEKSLRDCFPWGIYYLQNIDYRPQAILCRGKLRAVPEEAYQVIKNNVEKVFGDRFLLLFQESFQGQPFFALVANPWQQKTETIETEKVTRPLIFLGLLLLTLLTTTVIGAGLSGITTQQLENNSSVLLQGLPYSLGLIAILGLHEFSHYFTAVKYKIKTTLPYFIPFPFFLGTFGAFIQMRSPVPTRKALFDVAVAGPLGGIIIAIPLLFWGLSLSEIVPLTNQSSLLNFQALNPQFSFLLSIVAKLALGSDLIAGKAIHLHPLAVAGYVGIIVTALNLMPVGQLDGGHIVHAMYGQKTAIIIGQLTRLFMFILALVQPDFLLWAIILLLMPVSDQPALNDVTELDNKRDLLGLFSLALLLSILLPLPEAVARWWGM
>NZ_CP012375.1|WP_046661738.1|1698615_1699248_+|YdcF-family-protein
MVLKANSRRKKRVSPQGKLGKSRLKLLAIPLILASLGWLYYDLRQQWLKPEAIFVLGGHADRERFAAKLAKEYPDLPIWVSSGSPRRYVRKIFKKAGISPERLHLDYNARDTVTNFTSLADQLKAQGIDSVYLVTSDNHMRRARLVGEIVFGSRGIVIKPVTVPSQSPPEPLEKSLRDGFRAILWIITGSTGEFWLESDSSPPQFPTQSK
>NZ_CP012375.1|WP_046661739.1|1699275_1700364_+|calcium/proton-exchanger
MLSKNTIFAILLIFVPLSIAGSLLHWGGTVVFITACLAIIPLAAYMGEATEAIAVVVGPNIGGLMNATFGNATELILAYVALREGFIDVVKATITGSIIGNLLLVMGLSMFLGGLRFKEQEFQPITARLNASAMNLAVVALLLPTAVEFTSTGVGEPVLQRLSVAVAAVLIFVYGLSLLFSMKTHTYLYDVGIAGIEEESTGENPEKPKIWFWSLILLIVTIAVAVESELLVASLEEATEQLGLTALFTGVILLPIIGNAAEHATAVTVALKNKMDLSVSVAVGSSMQIALFVAPVLVIMGYIIGQPMDLNFNPFELVAVAVAVWLANSISSDGRSNWLEGMLLLATYTILALAFFFHPLTA
>NZ_CP012375.1|WP_046661740.1|1700366_1701044_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MILPELFDLWQETLEWQPDGAQQARFQQLYELILEGNQRFNLTRITQPEEFWEKHLWDSLSGLAWLQKSQPDLLTKSLSVIDLGTGAGFPGVPIAIAYTHWSVTLLDSTQKKINFLEEVIDKLELNNTKTRLGRAEIVGKNLKHNCAYDIVCLRAVGNVDICVNYALPFLKKTGIAILYRGQWSEQDSLSLEENLGKAGGKILEIASFTTPLSQSIRHCLYISKK
>NZ_CP012375.1|WP_066029744.1|1701524_1702172_-|ABC-transporter-ATP-binding-protein
MLYLKDVVYHPPAALNPILQGINLELAPQELGLIVGPSGSGKTTLLEILAGFADKTAGTIHWRDQELTVLHLQQLGGIVFQFPERHFCGKTILEELRLGHPEIKSDRLTAALKEVGLENIPLDNSPHNLSGGQQRRLSLAVQLIRQPNLLLLDEPTAGLDWSMRRQLAKLLASLKQHWTLLVVSHDAGELLPIADRHWKIEQGHLRELKSEKTDS
>NZ_CP012375.1|WP_046661741.1|1702257_1703172_+|tetratricopeptide-repeat-protein
MVLRLGLTKKMAIGASLAVMVVVNWIGPGLAGDPFRKTNPRPIGDKTEAAFNAIFKQGNYLEAKKLIVEATEKEPQEPLAHAMRASLAFTDQDWNTLKTYSEKTKAAAKQMQDSDPLRGNLYLAVGSFLEGTYVFQTEGAVSAIPRLQQVFQYLETAEKANPTDPELNLLKGYMDLILAVNLPFSSPQEAIERLETYGSPDYLVDRGIALAYRDLKQYDQALRFIDNALKATPDNPELMYLKGQILRIQGNTDKNTGSLKLALDYFNNALKKQEQLPESVKKQLNREHRKVQEEIKSLENTASR

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Crispr_ID: NZ_CP012375_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_8

1794100-1794199

Orphan

Consensus_repeat	Method
TTATGAGAGAATTGTTAATCAAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_8

>merge|NZ_CP012375|8|1794100-1794199|CRISPRCasFinder
TTATGAGAGAATTGTTAATCAAGGGAAGGCGGATATTGAGCAAGCGGAGTTACGATTAATCGAACAAAAGAGGATTTATCAGAGAATTGTTAATCAAGGG

>NZ_CP012375|8|8|1794100-1794199|CRISPRCasFinder
TTATGAGAGAATTGTTAATCAAGGG	AAGGCGGATATTGAGCAAGCGGAGTTACGATTAATCGAACAAAAGAGGAT
TTATCAGAGAATTGTTAATCAAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_002738203.1\|1796409_1796772_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046663665.1\|1802889_1804173_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP012375.1\|WP_046661806.1\|1794938_1795676_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|275293
NZ_CP012375.1\|WP_046661802.1\|1786805_1787663_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012375.1\|WP_046661811.1\|1801367_1802099_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223750
NZ_CP012375.1\|WP_002737941.1\|1796731_1797022_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661804.1\|1789878_1790073_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029759.1\|1781499_1782537_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845
NZ_CP012375.1\|WP_103672700.1\|1787678_1787903_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223831
NZ_CP012375.1\|WP_046661810.1\|1800144_1801095_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_CP012375.1\|WP_046663662.1\|1790416_1793131_+\|peptidase-domain-containing-ABC-transporter	unknown	unknown	gnl\|CDD\|225183
NZ_CP012375.1\|WP_046661812.1\|1802312_1802846_+\|DNA-starvation/stationary-phase-protection-protein-Dps	unknown	unknown	gnl\|CDD\|236521
NZ_CP012375.1\|WP_002797385.1\|1784550_1785252_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_CP012375.1\|WP_046661801.1\|1785262_1786597_+\|ATP-dependent-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
NZ_CP012375.1\|WP_046661807.1\|1795779_1795965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_004160464.1\|1786618_1786828_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_071846438.1\|1788842_1789619_-\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP012375.1\|WP_046661809.1\|1798303_1799473_-\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
NZ_CP012375.1\|WP_046661798.1\|1782861_1784259_+\|trigger-factor	unknown	unknown	gnl\|CDD\|234956
NZ_CP012375.1\|WP_046661808.1\|1797175_1798279_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375425

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046663665.1\|1802889_1804173_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.42806e-17
NZ_CP012375.1\|WP_046661806.1\|1794938_1795676_+\|peptidylprolyl-isomerase	gnl\|CDD\|275293	TIGR04500, PpiC_rel_mature, putative peptide maturation system protein. Members of this protein family have a novel N-terminal sequence region. Close homologs to the C-terminal region of this protein score well to PpiC-type peptidyl-prolyl cis-trans isomerase models (see pfam00639), yet no sequence within the family scores well to such models, suggesting origin within a branch of the PpiC family but subsequent neofunctionalization with a rapid change of sequence. The genome context for members always includes an ATP-grasp enzyme associated with peptide modification and a short polypeptide likely to be the modification target.	7.06007e-13
NZ_CP012375.1\|WP_046661802.1\|1786805_1787663_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.26451e-37
NZ_CP012375.1\|WP_046661811.1\|1801367_1802099_+\|glutathione-peroxidase	gnl\|CDD\|223750	COG0678, AHP1, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	9.89812e-93
NZ_CP012375.1\|WP_046661809.1\|1798303_1799473_-\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	5.68446e-09
NZ_CP012375.1\|WP_066029759.1\|1781499_1782537_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	0
NZ_CP012375.1\|WP_103672700.1\|1787678_1787903_+\|peptidylprolyl-isomerase	gnl\|CDD\|223831	COG0760, SurA, Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones].	3.94717e-05
NZ_CP012375.1\|WP_046661810.1\|1800144_1801095_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	1.03321e-93
NZ_CP012375.1\|WP_046663662.1\|1790416_1793131_+\|peptidase-domain-containing-ABC-transporter	gnl\|CDD\|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	0
NZ_CP012375.1\|WP_046661812.1\|1802312_1802846_+\|DNA-starvation/stationary-phase-protection-protein-Dps	gnl\|CDD\|236521	PRK09448, PRK09448, DNA starvation/stationary phase protection protein Dps; Provisional.	9.3039e-90
NZ_CP012375.1\|WP_002797385.1\|1784550_1785252_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	5.87965e-140
NZ_CP012375.1\|WP_046661801.1\|1785262_1786597_+\|ATP-dependent-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
NZ_CP012375.1\|WP_071846438.1\|1788842_1789619_-\|IS5/IS1182-family-transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.25487e-33
NZ_CP012375.1\|WP_046661798.1\|1782861_1784259_+\|trigger-factor	gnl\|CDD\|234956	PRK01490, tig, trigger factor; Provisional.	3.6234e-117
NZ_CP012375.1\|WP_046661808.1\|1797175_1798279_-\|hypothetical-protein	gnl\|CDD\|375425	pfam17914, HopA1, HopA1 effector protein family. This family includes the HopA1 effector protein from Pseudomonas syringae. Structurally this protein has an alpha + beta fold. The effector protein HopA1 was shown to affect the EDS1 complex by binding EDS1 directly and activating the immune response signaling pathway.	9.51935e-75

>NZ_CP012375.1|WP_046663662.1|1790416_1793131_+|peptidase-domain-containing-ABC-transporter
MTTKEYLSGLIGQFLSEEDLASLVESAEFSKPNPGLLLESISASDGLYILVAGKVRLVNSSLDLISTLHPAQLFGECTLFPEAGFLDYAVRVSPQAELCYIPGKVLRSIIHKNSRFKEYLYNLATAKDNEQKRKFSINTQLDLSVNDDQELIAGISTIKDEIYLKTHKQKVNKAYFPSPTQRVTHLWQHITRRYPFFEQQSGSDCGAACLVMVARYWGKKFSVNRIRDIANVDANGASLRGLSAAAESIGFSTRPVKASIDQLAKQKLPAIAHWEGKHYIVVYEITRNQVIVADPAIGQRSLTYPEFKTGWQGYTLLLQPTALIKELKNHTTPFWQFFNLASPHGQVLLEVFIASLVIQIFGLVTPLFTQLLLDRVVVQGSTLTLTAVGLGLVIFGLFRVALTGLRQYLLDHTANKVNLAMIVGFITHTFRLPLRFFEFRYVGDIMARVQENRKIERFLTGEALSIVLDLLTVFIYVGLMFWYSWKMALLALVIVPPFFLLAIIATPFLQKISREIFAALAEESGYLIQSLTGVRTVKSLAIEQVVRWRWEEFLNKSIRKNFSGQIISNRLQVFSLTIESLVTTGLLWFGAWLVIQGELTIGQLVAFNMLIGNVINPFQRLTVLWNELQEVIIAVERINDVIDTEPEEDLQSQARYYLTDLRGDIIFDKVTFRYHPESETNVLENLSFEIKAGQTVALVGRSGSGKTTISKLVLGLYTPTDGKIFIDGHDITSISLSSLRQRVGVVDQDTFLFGGTIRDNLTLARPSATQAEIIEAAQLAGADEFIQKLPMSYETQIGEGGGLLSGGQRQRLAIARALLGNPRLLIFDEATSHLDVESERIIQTNLNRILKGRTTLIIAHRLSTVRNAHIILVLDRGVLIEQGNHEQLMAKKGHYYYLNHQQLN
>NZ_CP012375.1|WP_046661804.1|1789878_1790073_-|hypothetical-protein
MKNYTWEYIQKYPKQTKRLLGIDYQQLEQLMALGKLIHRKNQSEIEKTKIRINQPGSGTPPKLS
>NZ_CP012375.1|WP_071846438.1|1788842_1789619_-|IS5/IS1182-family-transposase
MLVYLRHHLSFQILGLIFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRDYELIVDSAEQPVERPTDYQEQKIYYSGKQKRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRQTLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEGEQSGEVIDVIISHSFPSKLDFVSSNPD
>NZ_CP012375.1|WP_103672700.1|1787678_1787903_+|peptidylprolyl-isomerase
MSFYDVTDKYIEDKELRRQGGYLGVQRRQDLRPEISAAVFATKPPQLLKPIVKAKGISLILVEEIIQRNWMIST
>NZ_CP012375.1|WP_046661802.1|1786805_1787663_+|alpha/beta-hydrolase
MKTQIIDKTVTVRGVPHYYEWIRQSESAQKKPVMVFIHGWGGSGRYWRSTAAAICDRFDCLLYDMRGFGRSKLPEKSPDLSYDLEEYALDLALFLDSLEIEKIYLNSHSMGASVATFFITMYPERVVKAVLTCNGIFEYNKAAFAAFHKFGKYVVQFRYDWFLKVPFADQLFMARFLHRSIPKSERIAFLEDFLAADYEAALGTIYTSVSEKAVEIMPGKFAEIKVPTLLVSGEKDIIIPAKMGKMAADLNNNIQYVEMANTAHFPMLEDAPTYLQKLQDFLEIN
>NZ_CP012375.1|WP_004160464.1|1786618_1786828_+|hypothetical-protein
MLNTVPAIIKEGRIELLESVPIPEGTRVLVTLIPEETNSDFWQKVSETALAKIWDNLEDDIYHENSNNR
>NZ_CP012375.1|WP_046661801.1|1785262_1786597_+|ATP-dependent-protease-ATP-binding-subunit-ClpX
MSKYDSHLKCSFCGKSQEQVRKLIAGPGVYICDECVELCNEILDEELMEPPSPVAPVEERPNKRRSGQNKTTWEQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSPEDSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQASKDKVAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLLKMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRKDVKRCLITREMVEKRSTAELLVHPSSLPSQESA
>NZ_CP012375.1|WP_002797385.1|1784550_1785252_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MLESRSPDYPITSNCRPAIYANTGRNSLANVLPVVIEQSGMGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDQVISRPELPDPTVPVTSL
>NZ_CP012375.1|WP_046661798.1|1782861_1784259_+|trigger-factor
MKVIQEKLPASQIGLEIEIPAETTKNTHEKVVNNLAKSANIPGFRPGKVPRQILLQRLGSKAVKAAVIEELIENCLESALKQEGIESLGTPQLLSQFEDLIAAYEPGKALTFSVSVDVAPTIILGDYENLSVTAEETVYDPESVENWFKERQEQLATLVPVEDRGAQLGDVAIVDYRGKSAETGEDIPDIDGEDLRVDMEPGRFIEGMVEGIVGMKPEEVKEMTLTFPEDYPKEDVAAKAVIFTITMKELKAKELPELDDDFAQEVSDQETIAELRASLEKRFQEQAEKETKDSIYDALTQELVKGATLDLPETLIEKEVTHILTQSFMQFQQMGLDVNQLFTKDNIPKMRESARPDALESLKQTLVVQELAKVAGIEVSPEAVTEKIAKIMAQLSDRDIDRQRLEQVITEEILAENTLEWLKGKATITLVPKGSLEEEASEEEETEETFAFTEVEVLAAEAEEE
>NZ_CP012375.1|WP_066029759.1|1781499_1782537_-|aspartate-semialdehyde-dehydrogenase
MSQKVRVAILGATGAVGTELLELLASRQFPLASLKLLASERSAGKTLDFQGESLLIEAVNERSFQDVDIVLASAGGSTSKAWAKTIVESGATIIDNSSAFRMNPEVPLVVPEINPDSVDNHRGIIANPNCTTILLGVAIWPLHQVQAIERVVVSTYQSASGAGARAMEEVKEQAQAILEHRLPPTNSFPYPLAFNLFPHNTPINGQGYCEEEMKMVNETRKIFACPGLRVSATCVRVPVLRAHSESVNLEFSRPFSVVKAREILETAPGVRLVEDWDANYFPMPIDATGRDEVLVGRIRQDISHPNGLELWLCGDQIRKGAALNAVQIAELLVKKNLVGSRLAAV
>NZ_CP012375.1|WP_046661806.1|1794938_1795676_+|peptidylprolyl-isomerase
MSQSVAITAEDILKQVKLSLQIPDIIESIISRQIITDAATEAGITVDNEELQQAADTLRLLQKLRGVQETFAWLEKHHLSVDDLEEIAYITVISEKLMTHLFAEKVEPYFYENQLDYTGVVMYEVVLDDEDLAMELFYSIQEEEMSFYDVAHQYIQDVELRRQGGYRGILSRKDLKPEISAAVFATTPPEVLKPIVTSKGVHLILVEEILQSELDNKLRCQIVSELFGEWVINQIESVSVVTNLG
>NZ_CP012375.1|WP_046661807.1|1795779_1795965_-|hypothetical-protein
MANITISDLRPAGADLFSDSESYLTDLTDSEMLDTLGGGGSITICWQNKTTRWRSISICWD
>NZ_CP012375.1|WP_002738203.1|1796409_1796772_+|hypothetical-protein
MSGINREIYLENRTSLIDKHLPETEKSQRELEIEGIVYLFNNRQTMERVAEEIKQRGERTGAADSEDKYERYGLFFAEPIGYILKLDGTRIPLHYGEIKIKKSTGKYHVIPRTRPRTTKS
>NZ_CP012375.1|WP_002737941.1|1796731_1797022_+|hypothetical-protein
MSYLVPDRAPQNPENAKTQITPTEKTQWEFAEIWVDPWLSPPYILMLVKEQSGKFSIQNPAQNYQSIFTSDTYEESLMWLLEDEYERVTGRFCQPE
>NZ_CP012375.1|WP_046661808.1|1797175_1798279_-|hypothetical-protein
MSLLNSQFHHLAPEVRGRLKEVLLDIVENVEISANFSIRHPDYQPWELPAEMLSRIQALPKEIQDKYMSLQLRSFLYGIYYNGSMQASQALGSENKGQQLDLENNSFAGVAMDFYLQLEAANKGEGYFDSGWSILREETDGSLAVTKGGLRLHIQRDKHLQESEKAAAVGDVVSILMPKNLVQNGFYMAVGNAGLQREEAMVRLYFNVTPEGAVAVMAGLTERLNERGIPFSFKALYNPVDYQRYDAGVLYFGKTDYELVRQVVANVYQQNQSVFKPEIPLFTLELAPGLGLAEEPDKKFGSEESFGMNRCQIIANGLLMAWQQEDNSAAGRIAAISEQFSGLGIDWQRPYLNADSEDVYQGLELAS
>NZ_CP012375.1|WP_046661809.1|1798303_1799473_-|aminoglycoside-phosphotransferase-family-protein
MKFVLSSQNVYDYLIDQKICDRSQENPGVEQIQAKNFNLLVTLPEGRKLLVKQEQFINLEKETVGEFFGEWRIPKFLENFPEIDHWRSFLPELLLHDADNSILVSTYLDNYQDLAEFYSKENLFPAQVATQIGSCLATIHRDTWNQSIYREFFVKEEFAGKPKVSPLLLESLERIGPEIFGMAPMDGLKFFALYQRYDSLGEAVHRASETISPICLTHNDIKLNNILLNRNWEDINGNAIRLIDWERSDWGDPAFDLGMAIASYLQIWLGSLVISNSLSIEESLRLATTPLELLQPSIGGLTLAYLETFPEILEYRPDFLKQVVQLAGFSLIIGILAMIQYQKTFNNTGIAMLQVAKALLSRPESSMPTIFGATATQLNQINSSVVGKV
>NZ_CP012375.1|WP_046661810.1|1800144_1801095_-|undecaprenyl-diphosphate-phosphatase
MMFPLLKKSYKWLGLAIITVILAITPAAIAQSTTSAIPLAKINWLQAIFLGFVQGVTEFLPISSTAHLKAIPVFLGWGDPGVTYTAVIQLGSIAAVLSYFWQDLRQISTGMVKAVASSDYRSQDFRLALGIILGTIPIVFFGLLMKLFIPDLDNSPLRSMTAIACASIVMSLLLGTAEKIGKHKRSFETLRQKDGVLMGLAQALALIPGVSRSGSTLTAGLFMGLERAVAARFSFLLGIPAITLAGLVEFKGVLDQINTSELIPLAIGVISSALFSYLSIAWLLDYLKKQSTWVFVWYRLFFGVTILIGVALGRFS
>NZ_CP012375.1|WP_046661811.1|1801367_1802099_+|glutathione-peroxidase
MLPNREGQRVPDVTFPVRQNNQWVNITSEELFKGKTVVLFALPGAFTPTCSTSHLPGYNELAPVFRENGVDTIVCLSVNDTFVMNEWAKDQECDNVVLIPDGNGEFSAGMGMLVDKADLGFGKRSWRYSMLVKDGVIEKMFIEPEEPGDPFKVSDAETMLHYINPEAKKPPLVSLFSKVGCPYCLRAKKMLEEKGLQYEEIILGRDATSRSLRAMSGNTTTPQVFIDGQLIGGSEELAAYLGA
>NZ_CP012375.1|WP_046661812.1|1802312_1802846_+|DNA-starvation/stationary-phase-protection-protein-Dps
MVATPVKTKTTGQYYSTRIDLALDIRKAIVEILSQTLAASLDLKTQVKQAHWNVKGLNFYQLHSLFDEMATELEGYGDMVAERITALGGTALGTARIAAANSILPEYPADIVDGSEHLVALAERYALYASHLRSAIDSTGNQGDADTADLYTEISRDIDKRLWFLEAHLIKSEDVIG
>NZ_CP012375.1|WP_046663665.1|1802889_1804173_-|protein-kinase
MLDQVLHSRYQVQQLLGKKTILARDRHTTQLVIIKLISVPRGQGNQFIGEITSKIALLRQLSHPSLPKYLDSFEIDSSQEQIIAIVRPYLSAQPLENYLNSSYLLAEQDLKQIAKYLLEILSYLHQQDFPINHGNIKLSNILLDTQSHRFYLVDFAFDSDSPTTDLQDIGKTLISLATGIKHRYIPENFEQKTNLSAFFIYWLKRLSNSHPDSHFRSVTEALASLYSCQLILVSIGNLTKPYGSEVTVYKTDNLLEIKIASKTKQKFFNNLKTQLRQFLPSLFFTIILLTIVGIYDLKLVAFLIPIILIFLLNLISSSLSWQLWKSFWQGELELKITPKKVSLYQKLWGLKFKLTADAASWEIYSLIRRNVTVTMQGENVNIIPPSLVLVANHREYIITASEDVSEAELDWLAQQLSDWLRLPITRI

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Crispr_ID: NZ_CP012375_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_9

1863206-1863304

TypeV

Consensus_repeat	Method
TCTTTACTAGGGGATAAGTTTGTACTTGTTAAG	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of NZ_CP012375_9

>merge|NZ_CP012375|9|1863206-1863304|CRISPRCasFinder
TCTTTACTAGGGGATAAGTTTGTACTTGTTAAGAATACATCTGTATCCCCTAGTAAATCTTCCCGTTCTTTACTAGGGGATAAGTTTGTACTGGTTAAG

>NZ_CP012375|9|9|1863206-1863304|CRISPRCasFinder
TCTTTACTAGGGGATAAGTTTGTACTTGTTAAG	AATACATCTGTATCCCCTAGTAAATCTTCCCGT
TCTTTACTAGGGGATAAGTTTGTACTGGTTAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046661852.1\|1859542_1859755_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661857.1\|1866254_1869275_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227265
NZ_CP012375.1\|WP_066029777.1\|1857216_1857681_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP012375.1\|WP_046661859.1\|1871740_1872064_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661854.1\|1860965_1861349_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375906
NZ_CP012375.1\|WP_046663670.1\|1860603_1860987_+\|DUF433-domain-containing-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_103672714.1\|1861364_1862059_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|224576
NZ_CP012375.1\|WP_046661850.1\|1858110_1858374_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661856.1\|1864237_1865200_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271195
NZ_CP012375.1\|WP_046661858.1\|1869434_1871669_-\|M6-family-metalloprotease-domain-containing-protein	unknown	unknown	gnl\|CDD\|274507
NZ_CP012375.1\|WP_066029778.1\|1858372_1858882_+\|ricin-type-beta-trefoil-lectin-domain-protein	unknown	unknown	gnl\|CDD\|366226
NZ_CP012375.1\|WP_071846442.1\|1876026_1876398_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176472
NZ_CP012375.1\|WP_046661851.1\|1859109_1859556_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350222
NZ_CP012375.1\|WP_052734173.1\|1875143_1875416_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182082
NZ_CP012375.1\|WP_046661853.1\|1860277_1860520_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|377269
NZ_CP012375.1\|WP_080949805.1\|1862588_1862897_-\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|119346
NZ_CP012375.1\|WP_066029779.1\|1872444_1874289_-\|alpha-amylase	unknown	unknown	gnl\|CDD\|200489
NZ_CP012375.1\|WP_046661862.1\|1876793_1877906_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP012375.1\|WP_080694069.1\|1875420_1875858_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350248
NZ_CP012375.1\|WP_046661863.1\|1881558_1881936_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046661857.1\|1866254_1869275_-\|hypothetical-protein	gnl\|CDD\|227265	COG4928, COG4928, Predicted P-loop ATPase [General function prediction only].	1.84379e-19
NZ_CP012375.1\|WP_066029777.1\|1857216_1857681_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	5.9e-63
NZ_CP012375.1\|WP_046661854.1\|1860965_1861349_+\|hypothetical-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	1.95771e-05
NZ_CP012375.1\|WP_066029778.1\|1858372_1858882_+\|ricin-type-beta-trefoil-lectin-domain-protein	gnl\|CDD\|366226	pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil lectin domain.	8.55677e-12
NZ_CP012375.1\|WP_103672714.1\|1861364_1862059_+\|IS1-family-transposase	gnl\|CDD\|224576	COG1662, InsB, Transposase and inactivated derivatives, IS1 family [DNA replication, recombination, and repair].	3.29419e-31
NZ_CP012375.1\|WP_046661856.1\|1864237_1865200_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271195	cd01195, INT_C_like_5, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.1981e-56
NZ_CP012375.1\|WP_046661858.1\|1869434_1871669_-\|M6-family-metalloprotease-domain-containing-protein	gnl\|CDD\|274507	TIGR03296, hypothetical_protein, M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.	2.73019e-48
NZ_CP012375.1\|WP_080694069.1\|1875420_1875858_+\|PIN-domain-containing-protein	gnl\|CDD\|350248	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins. This subfamily includes Mycobacterium tuberculosis VapC27 and VapC40. It belongs to the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.81306e-16
NZ_CP012375.1\|WP_071846442.1\|1876026_1876398_+\|hypothetical-protein	gnl\|CDD\|176472	cd05468, pVHL, von Hippel-Landau (pVHL) tumor suppressor protein. von Hippel-Landau (pVHL) protein, the gene product of VHL, is a critical regulator of the ubiquitous oxygen-sensing pathway. It is conserved throughout evolution, as its homologs are found in organisms ranging from mammals to the Drosophila melanogaster, Anopheles gambiae insects and the Caenorhabditis elegans nematode. pVHL acts as the substrate recognition component of an E3 ubiquitin ligase complex. Several proteins have been identified as pVHL-binding proteins that are subject to ubiquitin-mediated proteolysis; the best characterized putative substrates are the alpha subunits of the hypoxia-inducible factor (HIF1alpha, HIF2alpha, and HIF3alpha). In addition to HIF degradation, pVHL has been implicated to be involved in HIF independent cellular processes. Germline VHL mutations cause renal cell carcinomas, hemangioblastomas and pheochromocytomas in humans. pVHL can bind to and direct the proper deposition of fibronectin and collagen IV within the extracellular matrix. It works to stabilize microtubules and foster the maintenance of primary cilium. It also has been reported to promote the stabilization and activation of p53 in a HIF-independent manner and, in neuronal cells, promote apoptosis by down-regulation of Jun-B.	1.06475e-21
NZ_CP012375.1\|WP_046661851.1\|1859109_1859556_+\|PIN-domain-containing-protein	gnl\|CDD\|350222	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis CDC1551, hypothetical protein MT3492, and similar bacterial and archaeal proteins are included in this subfamily. They are PIN domain homologs of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.7634e-08
NZ_CP012375.1\|WP_052734173.1\|1875143_1875416_+\|hypothetical-protein	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	9.82488e-05
NZ_CP012375.1\|WP_046661853.1\|1860277_1860520_+\|DUF433-domain-containing-protein	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	1.0878e-15
NZ_CP012375.1\|WP_080949805.1\|1862588_1862897_-\|ASCH-domain-containing-protein	gnl\|CDD\|119346	cd06554, ASCH_ASC-1_like, ASC-1 homology domain, ASC-1-like subfamily. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation. The domain has been named after the ASC-1 protein, the activating signal cointegrator 1 or thyroid hormone receptor interactor protein 4 (TRIP4). ASC-1 is conserved in many eukaryotes and has been suggested to participate in a protein complex that interacts with RNA. It has been shown that ASC-1 mediates the interaction between various transciption factors and the basal transcriptional machinery.	2.33547e-22
NZ_CP012375.1\|WP_066029779.1\|1872444_1874289_-\|alpha-amylase	gnl\|CDD\|200489	cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP012375.1\|WP_046661862.1\|1876793_1877906_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.32174e-71

>NZ_CP012375.1|WP_080949805.1|1862588_1862897_-|ASCH-domain-containing-protein
MKAISLWQPWASLVANGLKLYETRGWPTKYRGVLAIHAAKRPLCKQGKSLISHLNRAFNLSIDGDKLPLGAIVALTDLTDCLEMVSEANATDVPNSIIENLG
>NZ_CP012375.1|WP_103672714.1|1861364_1862059_+|IS1-family-transposase
MQCPECKSTHIRKNGINKQGKQNHICVTCGRQFINNYEKQKGYDEKTKRECLTAYVNGMGFRGIERLKGVHHTTVINWVKSVGELLPVAYDPETIPEVGELDELETFVGSKKTKFWVWTAVDHFKKGILGWVIGDHSSETFRPLWELVKSWGCYFYVSDGWSVYPCFIAEGDHIISKTYMTRVEGENTRLRHYLARLHRKTLCYSKSTEMLGYSIRLLIHYLKFQEVPIPY
>NZ_CP012375.1|WP_046661854.1|1860965_1861349_+|hypothetical-protein
MTGRNFLVDHNLRGHSLVLAGVLAASGWLDLISIRFILFEEVGLAVTSDDRVVWRYAQANQMILITANRSMKGKDSLEQVMREENTPTSLPVVTIGNIERLLAEPDYRDRCVNRLVDIVVRRCIIEI
>NZ_CP012375.1|WP_046663670.1|1860603_1860987_+|DUF433-domain-containing-protein
MAPASNGKTAIIRTERGLTIAGTRITLYDVMDYITEHYPPKFIRAMLALNDEQLNAALSYIETYRAEVEAEYQLVLKEAEELRQYYEEQNRERVARIAAKPPKPGTEAIRAKLQAEKAKLASRAGIF
>NZ_CP012375.1|WP_046661853.1|1860277_1860520_+|DUF433-domain-containing-protein
MKLDRITSHPNRMNGQPCIRNLRLTVRRVIELLATYPDRAELHQEFPELEDEDIRQALIFASSYLDDRIIELPNRYEAVT
>NZ_CP012375.1|WP_046661852.1|1859542_1859755_+|hypothetical-protein
MIKVKNEQQVLQEGLCVLFMNMEPSKVTRFWAACNSGSGDYLKLKEELFGQESVASLYDKILKFQESKPN
>NZ_CP012375.1|WP_046661851.1|1859109_1859556_+|PIN-domain-containing-protein
MTKVYLDTSAYNRPFDDQTQPKIFLESQAVVIILQMVETRMVDLVSSSVLEYENSRNPYPLKQEAMNRYLQMAEARQMVDEAIRQRAEELGHNGLKAVDALHVACAEALRSDYFITCDKRLINRCARLMLKVVNPVDFVLEVNGDDQS
>NZ_CP012375.1|WP_066029778.1|1858372_1858882_+|ricin-type-beta-trefoil-lectin-domain-protein
MGAKECRKPSRCVEAIERVENIVNTNGSSESVRQLESWIGSASQNENCAISLSRHLTVNVNIVGLTRSAVAELDRLRNPTITSLTSGNALVNAGGKCLDIHAPDMRNNGSRVQVWDCNGQPQQQWSFSGNALVNAGGKCLDIHAPDMRNNGSRVQVWDCNGQPQQQWRF
>NZ_CP012375.1|WP_046661850.1|1858110_1858374_-|hypothetical-protein
MCRPEKQTPLAKPDAETALTKATTAATVPNVTGSELAGRKAGKKCTCKATKIEMKSMLILRNRKALENLILHCSKILRLIDEEIISV
>NZ_CP012375.1|WP_066029777.1|1857216_1857681_+|DUF29-domain-containing-protein
MDNKTLYEQDFYLWIRTTINQLQARQFERVDLENLLEELASMGRSEKRTIKSLLTRLLEHLLKLKYWAAERERNEGHCKGEIRTFRLDILDELKDSPSLKPYLLEIFDECYLSVRKNASDRSQLPLDTFPAIPLGSLEQILDEDWFPAGDNLEI
>NZ_CP012375.1|WP_046661856.1|1864237_1865200_+|tyrosine-type-recombinase/integrase
MSATDLTKREDIAPLDNPDVLAQLLAAKRSPRTRHAYAGDLKDFFVFAFGCEEPTPGVTQEFLSLDRFAALSLVLRYKAHLRDERGLAEATRNRRLSAIKSLVRLANQLGQCDFNLSELSGDKVVRYRDTTGVSKEVYRDLLAVPDRSTLKGKRDYAILRLLWDNALRRGEIESADIKDLDTEGRTLAIFGKGRGQQKETVSLSRPTLDALVDWLRERRELDIRQPLFIALDRCSRGHRLTGSAIHKLVAKIAAAAGVNKKMSPHRVRHSGITAALDATGGDVRRVQKLSRHADLNTLMIYDDNRKNVQGEISDLLAGLV
>NZ_CP012375.1|WP_046661857.1|1866254_1869275_-|hypothetical-protein
MKRKALVIGVNQYKEGIPCPQHSLKDAEDIAELLRTIGQFDQVQILLNQFEQQDKDHKNPYEPDQLKFLIEQLFNPQDGDTETALFYFSGNGAEIYEAEGKETQKGELLLTDFPNPLNESSSEHTSELRSRSISLKWLHDQLEKSPVKQQIVWLDSDFSNLFIDLFSQTSSEVKYDRCFIAASYDYAGENSTHGVLTDALLSCLNPVIKILITNYTLEDALINTFNWQKNLIKNIGNRILLTGRNVRPQKLWNDLAEGKDLLNLKSEADALADMLLLRDLEPPLAVGILGGWGSGKSFIMNLMQQRMNEIRSASLTKKQTWGKEEEAFPYVGHIYQIKFDAWTYAKADLWYSLTQTIFYEFNRQYTLEQQIEQSLKKVNRSQLEGGKFWKALNAMSEFDRTASLRELANFSEQTYNELEKSKSDQEFSSSLWEKIGDIRKNEKSELQNLKERLRKENRKLRGLILRKMPSYFLQKNWLSLVAFLAGLSIVAFPLLPDQLRDQLPKKLSDVLSTYTTLIQTGGFITALGTGISLLQKTQEEQEKILTGLKQIAGEAKEKFEVGKDVWVTLQQEILQSDRDIEQQVNKIKRHELQIEQLQQQIGLVSNYPTLNTFLEDISKNELYEKKLGYLHQLQRNLAELTNCLHYNPKMKDNDEQFSKLEKTFPRGPARIVLFIDDLDRCPPDRVVEVLEAVQLLVKTPLFIAVVAIDERYVTRALEKYYAGVLFHQGRPSGTDYLEKIIQIPYRIRPVAHSALANYLHQQMEVEESDEETSNVAVSTENISTISVDNSQSNKTDFTENKVGGKLLDSDRDKSVTILTPEKIKFKSEEFKILLECCRHTDLPPRMIKRLVNIYKIFKIIEFLSNKVWLKSNEQTKAILSVLSLSAYYPDLIREVFDDLDIQFEELESQLEGLKQEEKQQQMQKLKLLDSLLKTLESLLNTSEEKDAPHLQREYRRLHHDATILLSGITLAQFDLETFNLVRSFCFFGDVGYSPEDSQRTVRSHQG
>NZ_CP012375.1|WP_046661858.1|1869434_1871669_-|M6-family-metalloprotease-domain-containing-protein
MSAIFGETVIFQQDNGLDVELVVFGDEFYARYETKDGYTAVYDPERGLYCYAVLLNGRFASSGVPISKHPPSDIRRGLKEAETIRNEKFERRYADLRPPQPGAAANVARTLGPNNGLLEGRRVSEGHIRGLTVLVEFADLTSAVTAADVEAMLNAPNYRENGNFCSVREYYHLMSNGKLDYSNVVVGPIKLSQNQRYYVQNLLCREALDKVVNQLRINLSQFDSCGESIVDALSFMYAGRTVYEGNLWPHNSELNLIYNGIKVRYYTIQSLGRERVDLSIGTFCHESGHLLCRLPDLYDYGSRDGDFEKSAGMGYYCLMSAGNHLNNGHTPAPICGYLRDLVGWCDRQVRLNSPGVYESKQGDYGTLMKYETDRANEYFIIENRTQRGLDAYLPDSGLAVYHCDTLGSNEWQGGTRERHYQCGLLQADGHLDIESNRNQGDSTDLFKRVDGVALSYATTPSTRDWDSSDSGLALADISEPGEVIRLKVGSLVPSNVVTGKVTADLLIPDNKREGISCAIAISQAGKVKSLSVSIDITHTYIGDLQVELQSPSGKKVLLHDRAGGSRRDWQQTYSSSSTPALSVLNGELIAGDWLLNVRDLASRDIGRLNRWNIEIEYESAGQVARGEVSPNLSIPDNTPTGISSAIAIAQSGTLKDISVGVVIPHTYIGDLLVEIVAPSGQSVTLHNISGGSKDNLRMTYDRTSTPALEALIGQPIQGNWSLRVKDLQRLDTGKLEKWSLQLMY
>NZ_CP012375.1|WP_046661859.1|1871740_1872064_-|hypothetical-protein
MSAIFGETLTFPQENGPEVELVVFGDEFYSRRETKDGYTVIYDDKLGQYGYAILCEGEFASSGIPISAPPSPGLQPHLEETEPIRREKFARRYTQLRPSDPDLPSQT
>NZ_CP012375.1|WP_066029779.1|1872444_1874289_-|alpha-amylase
MTTTVQGLSQLNFASLSPAGGLFPSPIAWEDQAFYFLMLDRFSNGRENGYKDNEGNFVQSGTTLPYSPADAGNAVKTEADAARWREAGTKYVGGTLKGLESKIGYLKRLGVTALWISPIFKQVRFRETYHGYGIQNFLEVEPHFGSREDLQKVVQTAHANGIYVILDIILNHAGNVFSYLGEQDHPWTGEMYPVEGFNDKNGSPTIPFTKPDPQNPPDYDGALFPVELQAPDTFTRKGYIKNWDYDPEFREGDFFDLKDIDHGYGSADDYLVSPALRHLCEAYKYWIAYADIDGFRIDTVKHMDMGATRYFVSVIREFAQGIGKENFFLLGEITGGRKRAYETLELTGLSAALGIDDIPDKLEYLVKGYRNPNEYFSLFRNSELVNKSSHIWFRNKMVTSFDDHDQVRKGNQKARFCADADASKVVLNVLALNALTLGIPCIYYGSEQCFDGRGGSDRYIRESMFGGEFGAFRTRGLHFFNEDHLVYRELAKILEIRRQNILLRRGRQYLRPISAPDDGVRFNLPEMVNGQIRSVVPWSRIFDGKEMLLAINTDYDQPKTAWVTIDNDLHCAGDGLTCLYSTDATQIGQSVTVAARNGKAVLVTVPAAAFVIFE
>NZ_CP012375.1|WP_052734173.1|1875143_1875416_+|hypothetical-protein
MKIKEFKIIAMELVTLDRSRCIQIPETLLEQLGIEYDSQFQVEVQDGKLVLNPIKEEPKVYYENDVLVVDSQLLVNTEAFIEELRQERMS
>NZ_CP012375.1|WP_080694069.1|1875420_1875858_+|PIN-domain-containing-protein
MIKVLFDTSVLVASILVNHEQHSACISWLTRVKRGEIQGYIGTHTLAELYAILSAFPAKPRLSPQLVQQLIKENLDSFEIISLTSDDYKAVINLMVTLNLRGGAIYDALIAYGSLKAEVDHLLTLNLKHFIRFGGRIEKISMEPR
>NZ_CP012375.1|WP_071846442.1|1876026_1876398_+|hypothetical-protein
MLLKWLKITGLSLIIWNLCYSAESQTSAEILRPRSCRVESELRSLNSNVSTYIQVINRSSSSVKVYWIDFNGKRQHYFDLDPLQSRDQQTYVTHPWLIAQSGANQPCIHIFLPIPQKGIIIID
>NZ_CP012375.1|WP_046661862.1|1876793_1877906_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MEKAYSFRFYPTPEQESLLRRTLGCVRLVYNKALHERTQAWYERQERVGYAQTSSMLTDWKKQEELDFLNEVSCVPLQQGLRHLQTAFTNFFAGRTKYPNFKKKHQGGSAEFTKSAFKFKDRQIYLAKCTEPLPIRWSRQIPESCEPSTVTVRLHPSGRWHISIRFDDPTIQPLPPTDKAIGIDLGISSLVITSDGDKVSNPKHFKKHYQRLRKAQKSLSRKQKGSKNREKARIKVAKIHAKITDNRKDHLHKLTTQLVRENQTIVVENLAVKNMVKNPKLSQAISDVSWGEITRQLAYKCRWYGRNYIEIDRWFPSSKRCSNCGYIAEKMPLNIREWDCPDCGTHHDRDVNASKNILAAGLAVSVCRAT
>NZ_CP012375.1|WP_046661863.1|1881558_1881936_-|hypothetical-protein
MTEDIATPSKIWIITGDSDLQKTPTGARSSRDTGGRLEGKEKSPEVAATERSQVDVSKLKLEMQGFLKAMREMLDEADPPSAKIRLDEVELSVEINGEGQVSLFGIGGKAGGKGAMTFKFKRKDG

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Crispr_ID: NZ_CP012375_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_10

1876472-1876638

TypeV

Consensus_repeat	Method
CTCTCTACTCGCCCTTAGAAATC	CRISPRCasFinder

2 spacers

cas14j

The CRISPR arrays of NZ_CP012375_10

>merge|NZ_CP012375|10|1876472-1876638|CRISPRCasFinder
CTCTCTACTCGCCCTTAGAAATCCGTGAAATCGAAACATCATATTTCGCTGTACGCGTCTGGGTTGAACGGCTCTCTACTCGCCCTTAGAAATCCGTTGAATGGAAACTAACCAGTAAGATTCGTCAGCCGATGGATTCATAGTCTCTCTACTCGCGCTTAGAAATC

>NZ_CP012375|10|10|1876472-1876638|CRISPRCasFinder
CTCTCTACTCGCCCTTAGAAATC	CGTGAAATCGAAACATCATATTTCGCTGTACGCGTCTGGGTTGAACGG
CTCTCTACTCGCCCTTAGAAATC	CGTTGAATGGAAACTAACCAGTAAGATTCGTCAGCCGATGGATTCATAGT
CTCTCTACTCGCGCTTAGAAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046661857.1\|1866254_1869275_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227265
NZ_CP012375.1\|WP_046661859.1\|1871740_1872064_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661867.1\|1884251_1884854_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP012375.1\|WP_046661862.1\|1876793_1877906_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP012375.1\|WP_103672714.1\|1861364_1862059_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|224576
NZ_CP012375.1\|WP_046661856.1\|1864237_1865200_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271195
NZ_CP012375.1\|WP_071846442.1\|1876026_1876398_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176472
NZ_CP012375.1\|WP_080694069.1\|1875420_1875858_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350248
NZ_CP012375.1\|WP_046661866.1\|1883985_1884255_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661865.1\|1883282_1883837_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_052734173.1\|1875143_1875416_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182082
NZ_CP012375.1\|WP_046661858.1\|1869434_1871669_-\|M6-family-metalloprotease-domain-containing-protein	unknown	unknown	gnl\|CDD\|274507
NZ_CP012375.1\|WP_080949805.1\|1862588_1862897_-\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|119346
NZ_CP012375.1\|WP_066029779.1\|1872444_1874289_-\|alpha-amylase	unknown	unknown	gnl\|CDD\|200489
NZ_CP012375.1\|WP_002746549.1\|1882461_1882695_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_103672714.1\|1885918_1886613_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|224576
NZ_CP012375.1\|WP_046661864.1\|1881950_1882175_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_103672703.1\|1886761_1887654_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP012375.1\|WP_046661863.1\|1881558_1881936_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046661871.1\|1887817_1888816_-\|adenosine-kinase	unknown	unknown	gnl\|CDD\|238573

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046661857.1\|1866254_1869275_-\|hypothetical-protein	gnl\|CDD\|227265	COG4928, COG4928, Predicted P-loop ATPase [General function prediction only].	1.84379e-19
NZ_CP012375.1\|WP_046661867.1\|1884251_1884854_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	5.32639e-23
NZ_CP012375.1\|WP_046661862.1\|1876793_1877906_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.32174e-71
NZ_CP012375.1\|WP_103672714.1\|1861364_1862059_+\|IS1-family-transposase	gnl\|CDD\|224576	COG1662, InsB, Transposase and inactivated derivatives, IS1 family [DNA replication, recombination, and repair].	3.29419e-31
NZ_CP012375.1\|WP_046661856.1\|1864237_1865200_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271195	cd01195, INT_C_like_5, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.1981e-56
NZ_CP012375.1\|WP_071846442.1\|1876026_1876398_+\|hypothetical-protein	gnl\|CDD\|176472	cd05468, pVHL, von Hippel-Landau (pVHL) tumor suppressor protein. von Hippel-Landau (pVHL) protein, the gene product of VHL, is a critical regulator of the ubiquitous oxygen-sensing pathway. It is conserved throughout evolution, as its homologs are found in organisms ranging from mammals to the Drosophila melanogaster, Anopheles gambiae insects and the Caenorhabditis elegans nematode. pVHL acts as the substrate recognition component of an E3 ubiquitin ligase complex. Several proteins have been identified as pVHL-binding proteins that are subject to ubiquitin-mediated proteolysis; the best characterized putative substrates are the alpha subunits of the hypoxia-inducible factor (HIF1alpha, HIF2alpha, and HIF3alpha). In addition to HIF degradation, pVHL has been implicated to be involved in HIF independent cellular processes. Germline VHL mutations cause renal cell carcinomas, hemangioblastomas and pheochromocytomas in humans. pVHL can bind to and direct the proper deposition of fibronectin and collagen IV within the extracellular matrix. It works to stabilize microtubules and foster the maintenance of primary cilium. It also has been reported to promote the stabilization and activation of p53 in a HIF-independent manner and, in neuronal cells, promote apoptosis by down-regulation of Jun-B.	1.06475e-21
NZ_CP012375.1\|WP_080694069.1\|1875420_1875858_+\|PIN-domain-containing-protein	gnl\|CDD\|350248	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins. This subfamily includes Mycobacterium tuberculosis VapC27 and VapC40. It belongs to the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.81306e-16
NZ_CP012375.1\|WP_046661871.1\|1887817_1888816_-\|adenosine-kinase	gnl\|CDD\|238573	cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. .	1.57029e-109
NZ_CP012375.1\|WP_052734173.1\|1875143_1875416_+\|hypothetical-protein	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	9.82488e-05
NZ_CP012375.1\|WP_046661858.1\|1869434_1871669_-\|M6-family-metalloprotease-domain-containing-protein	gnl\|CDD\|274507	TIGR03296, hypothetical_protein, M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.	2.73019e-48
NZ_CP012375.1\|WP_080949805.1\|1862588_1862897_-\|ASCH-domain-containing-protein	gnl\|CDD\|119346	cd06554, ASCH_ASC-1_like, ASC-1 homology domain, ASC-1-like subfamily. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation. The domain has been named after the ASC-1 protein, the activating signal cointegrator 1 or thyroid hormone receptor interactor protein 4 (TRIP4). ASC-1 is conserved in many eukaryotes and has been suggested to participate in a protein complex that interacts with RNA. It has been shown that ASC-1 mediates the interaction between various transciption factors and the basal transcriptional machinery.	2.33547e-22
NZ_CP012375.1\|WP_066029779.1\|1872444_1874289_-\|alpha-amylase	gnl\|CDD\|200489	cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP012375.1\|WP_103672714.1\|1885918_1886613_+\|IS1-family-transposase	gnl\|CDD\|224576	COG1662, InsB, Transposase and inactivated derivatives, IS1 family [DNA replication, recombination, and repair].	3.29419e-31
NZ_CP012375.1\|WP_103672703.1\|1886761_1887654_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	9.9981e-41

>NZ_CP012375.1|WP_071846442.1|1876026_1876398_+|hypothetical-protein
MLLKWLKITGLSLIIWNLCYSAESQTSAEILRPRSCRVESELRSLNSNVSTYIQVINRSSSSVKVYWIDFNGKRQHYFDLDPLQSRDQQTYVTHPWLIAQSGANQPCIHIFLPIPQKGIIIID
>NZ_CP012375.1|WP_080694069.1|1875420_1875858_+|PIN-domain-containing-protein
MIKVLFDTSVLVASILVNHEQHSACISWLTRVKRGEIQGYIGTHTLAELYAILSAFPAKPRLSPQLVQQLIKENLDSFEIISLTSDDYKAVINLMVTLNLRGGAIYDALIAYGSLKAEVDHLLTLNLKHFIRFGGRIEKISMEPR
>NZ_CP012375.1|WP_052734173.1|1875143_1875416_+|hypothetical-protein
MKIKEFKIIAMELVTLDRSRCIQIPETLLEQLGIEYDSQFQVEVQDGKLVLNPIKEEPKVYYENDVLVVDSQLLVNTEAFIEELRQERMS
>NZ_CP012375.1|WP_066029779.1|1872444_1874289_-|alpha-amylase
MTTTVQGLSQLNFASLSPAGGLFPSPIAWEDQAFYFLMLDRFSNGRENGYKDNEGNFVQSGTTLPYSPADAGNAVKTEADAARWREAGTKYVGGTLKGLESKIGYLKRLGVTALWISPIFKQVRFRETYHGYGIQNFLEVEPHFGSREDLQKVVQTAHANGIYVILDIILNHAGNVFSYLGEQDHPWTGEMYPVEGFNDKNGSPTIPFTKPDPQNPPDYDGALFPVELQAPDTFTRKGYIKNWDYDPEFREGDFFDLKDIDHGYGSADDYLVSPALRHLCEAYKYWIAYADIDGFRIDTVKHMDMGATRYFVSVIREFAQGIGKENFFLLGEITGGRKRAYETLELTGLSAALGIDDIPDKLEYLVKGYRNPNEYFSLFRNSELVNKSSHIWFRNKMVTSFDDHDQVRKGNQKARFCADADASKVVLNVLALNALTLGIPCIYYGSEQCFDGRGGSDRYIRESMFGGEFGAFRTRGLHFFNEDHLVYRELAKILEIRRQNILLRRGRQYLRPISAPDDGVRFNLPEMVNGQIRSVVPWSRIFDGKEMLLAINTDYDQPKTAWVTIDNDLHCAGDGLTCLYSTDATQIGQSVTVAARNGKAVLVTVPAAAFVIFE
>NZ_CP012375.1|WP_046661859.1|1871740_1872064_-|hypothetical-protein
MSAIFGETLTFPQENGPEVELVVFGDEFYSRRETKDGYTVIYDDKLGQYGYAILCEGEFASSGIPISAPPSPGLQPHLEETEPIRREKFARRYTQLRPSDPDLPSQT
>NZ_CP012375.1|WP_046661858.1|1869434_1871669_-|M6-family-metalloprotease-domain-containing-protein
MSAIFGETVIFQQDNGLDVELVVFGDEFYARYETKDGYTAVYDPERGLYCYAVLLNGRFASSGVPISKHPPSDIRRGLKEAETIRNEKFERRYADLRPPQPGAAANVARTLGPNNGLLEGRRVSEGHIRGLTVLVEFADLTSAVTAADVEAMLNAPNYRENGNFCSVREYYHLMSNGKLDYSNVVVGPIKLSQNQRYYVQNLLCREALDKVVNQLRINLSQFDSCGESIVDALSFMYAGRTVYEGNLWPHNSELNLIYNGIKVRYYTIQSLGRERVDLSIGTFCHESGHLLCRLPDLYDYGSRDGDFEKSAGMGYYCLMSAGNHLNNGHTPAPICGYLRDLVGWCDRQVRLNSPGVYESKQGDYGTLMKYETDRANEYFIIENRTQRGLDAYLPDSGLAVYHCDTLGSNEWQGGTRERHYQCGLLQADGHLDIESNRNQGDSTDLFKRVDGVALSYATTPSTRDWDSSDSGLALADISEPGEVIRLKVGSLVPSNVVTGKVTADLLIPDNKREGISCAIAISQAGKVKSLSVSIDITHTYIGDLQVELQSPSGKKVLLHDRAGGSRRDWQQTYSSSSTPALSVLNGELIAGDWLLNVRDLASRDIGRLNRWNIEIEYESAGQVARGEVSPNLSIPDNTPTGISSAIAIAQSGTLKDISVGVVIPHTYIGDLLVEIVAPSGQSVTLHNISGGSKDNLRMTYDRTSTPALEALIGQPIQGNWSLRVKDLQRLDTGKLEKWSLQLMY
>NZ_CP012375.1|WP_046661857.1|1866254_1869275_-|hypothetical-protein
MKRKALVIGVNQYKEGIPCPQHSLKDAEDIAELLRTIGQFDQVQILLNQFEQQDKDHKNPYEPDQLKFLIEQLFNPQDGDTETALFYFSGNGAEIYEAEGKETQKGELLLTDFPNPLNESSSEHTSELRSRSISLKWLHDQLEKSPVKQQIVWLDSDFSNLFIDLFSQTSSEVKYDRCFIAASYDYAGENSTHGVLTDALLSCLNPVIKILITNYTLEDALINTFNWQKNLIKNIGNRILLTGRNVRPQKLWNDLAEGKDLLNLKSEADALADMLLLRDLEPPLAVGILGGWGSGKSFIMNLMQQRMNEIRSASLTKKQTWGKEEEAFPYVGHIYQIKFDAWTYAKADLWYSLTQTIFYEFNRQYTLEQQIEQSLKKVNRSQLEGGKFWKALNAMSEFDRTASLRELANFSEQTYNELEKSKSDQEFSSSLWEKIGDIRKNEKSELQNLKERLRKENRKLRGLILRKMPSYFLQKNWLSLVAFLAGLSIVAFPLLPDQLRDQLPKKLSDVLSTYTTLIQTGGFITALGTGISLLQKTQEEQEKILTGLKQIAGEAKEKFEVGKDVWVTLQQEILQSDRDIEQQVNKIKRHELQIEQLQQQIGLVSNYPTLNTFLEDISKNELYEKKLGYLHQLQRNLAELTNCLHYNPKMKDNDEQFSKLEKTFPRGPARIVLFIDDLDRCPPDRVVEVLEAVQLLVKTPLFIAVVAIDERYVTRALEKYYAGVLFHQGRPSGTDYLEKIIQIPYRIRPVAHSALANYLHQQMEVEESDEETSNVAVSTENISTISVDNSQSNKTDFTENKVGGKLLDSDRDKSVTILTPEKIKFKSEEFKILLECCRHTDLPPRMIKRLVNIYKIFKIIEFLSNKVWLKSNEQTKAILSVLSLSAYYPDLIREVFDDLDIQFEELESQLEGLKQEEKQQQMQKLKLLDSLLKTLESLLNTSEEKDAPHLQREYRRLHHDATILLSGITLAQFDLETFNLVRSFCFFGDVGYSPEDSQRTVRSHQG
>NZ_CP012375.1|WP_046661856.1|1864237_1865200_+|tyrosine-type-recombinase/integrase
MSATDLTKREDIAPLDNPDVLAQLLAAKRSPRTRHAYAGDLKDFFVFAFGCEEPTPGVTQEFLSLDRFAALSLVLRYKAHLRDERGLAEATRNRRLSAIKSLVRLANQLGQCDFNLSELSGDKVVRYRDTTGVSKEVYRDLLAVPDRSTLKGKRDYAILRLLWDNALRRGEIESADIKDLDTEGRTLAIFGKGRGQQKETVSLSRPTLDALVDWLRERRELDIRQPLFIALDRCSRGHRLTGSAIHKLVAKIAAAAGVNKKMSPHRVRHSGITAALDATGGDVRRVQKLSRHADLNTLMIYDDNRKNVQGEISDLLAGLV
>NZ_CP012375.1|WP_080949805.1|1862588_1862897_-|ASCH-domain-containing-protein
MKAISLWQPWASLVANGLKLYETRGWPTKYRGVLAIHAAKRPLCKQGKSLISHLNRAFNLSIDGDKLPLGAIVALTDLTDCLEMVSEANATDVPNSIIENLG
>NZ_CP012375.1|WP_103672714.1|1861364_1862059_+|IS1-family-transposase
MQCPECKSTHIRKNGINKQGKQNHICVTCGRQFINNYEKQKGYDEKTKRECLTAYVNGMGFRGIERLKGVHHTTVINWVKSVGELLPVAYDPETIPEVGELDELETFVGSKKTKFWVWTAVDHFKKGILGWVIGDHSSETFRPLWELVKSWGCYFYVSDGWSVYPCFIAEGDHIISKTYMTRVEGENTRLRHYLARLHRKTLCYSKSTEMLGYSIRLLIHYLKFQEVPIPY
>NZ_CP012375.1|WP_046661862.1|1876793_1877906_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MEKAYSFRFYPTPEQESLLRRTLGCVRLVYNKALHERTQAWYERQERVGYAQTSSMLTDWKKQEELDFLNEVSCVPLQQGLRHLQTAFTNFFAGRTKYPNFKKKHQGGSAEFTKSAFKFKDRQIYLAKCTEPLPIRWSRQIPESCEPSTVTVRLHPSGRWHISIRFDDPTIQPLPPTDKAIGIDLGISSLVITSDGDKVSNPKHFKKHYQRLRKAQKSLSRKQKGSKNREKARIKVAKIHAKITDNRKDHLHKLTTQLVRENQTIVVENLAVKNMVKNPKLSQAISDVSWGEITRQLAYKCRWYGRNYIEIDRWFPSSKRCSNCGYIAEKMPLNIREWDCPDCGTHHDRDVNASKNILAAGLAVSVCRAT
>NZ_CP012375.1|WP_046661863.1|1881558_1881936_-|hypothetical-protein
MTEDIATPSKIWIITGDSDLQKTPTGARSSRDTGGRLEGKEKSPEVAATERSQVDVSKLKLEMQGFLKAMREMLDEADPPSAKIRLDEVELSVEINGEGQVSLFGIGGKAGGKGAMTFKFKRKDG
>NZ_CP012375.1|WP_046661864.1|1881950_1882175_-|hypothetical-protein
MGKPQIAVRIPPSLLAELNQYVERVGTSKTDVIVSAIATYLGCAETVPLSQRIAEVERKIMELESLVKGKRDNI
>NZ_CP012375.1|WP_002746549.1|1882461_1882695_-|hypothetical-protein
MKLSTNIPDVLYQQIETLANKQNIPVEQLVTMALSAQISSWMTKDYLEEKAQQGSWEKFQQALAKVSDGEPEDYDKM
>NZ_CP012375.1|WP_046661865.1|1883282_1883837_-|hypothetical-protein
MPANAQNQTDYEALCRNRQSYGFSQEECDRWIREQNQRSPTNPSSNGRSAVNSAFIGEKVYKLRLRDAPTGNIGQQSIFSPGDLDREEWVVVTLINNQRVKVRHATNVMNKFWGTRKWYDHPATAIRLCAINGFDTTDCVTAQGDTIDLPEGKTIHDVQIDFKYVEGGSVYTRTVQIAPGTLPD
>NZ_CP012375.1|WP_046661866.1|1883985_1884255_-|hypothetical-protein
MTTGRYGDLIKKAREPENQNTGLSETQNTGLPESQTFGNQENQNEPEVNLCVKVPKSLRQHWAAEAKRQGTTMTAVIMAALSDRFGKPD
>NZ_CP012375.1|WP_046661867.1|1884251_1884854_-|ParA-family-protein
MKIITVTGYKGGVGKSTTAVHIATYFSDRGRTVLVDGDPNRTALGWAERGNLPFTVADERQAMKIIGGADFVIIDTPARPHSDDLKELAKGCELLILPTAPDVLSLQPMLETAKDLGDANYRALITIVPPPPNKEGEILRQELIEGSIPVFKSMIRRTVGYQKAALAGVPIRNLDDARLRAAWKDYKALGEEILAILEVL
>NZ_CP012375.1|WP_103672714.1|1885918_1886613_+|IS1-family-transposase
MQCPECKSTHIRKNGINKQGKQNHICVTCGRQFINNYEKQKGYDEKTKRECLTAYVNGMGFRGIERLKGVHHTTVINWVKSVGELLPVAYDPETIPEVGELDELETFVGSKKTKFWVWTAVDHFKKGILGWVIGDHSSETFRPLWELVKSWGCYFYVSDGWSVYPCFIAEGDHIISKTYMTRVEGENTRLRHYLARLHRKTLCYSKSTEMLGYSIRLLIHYLKFQEVPIPY
>NZ_CP012375.1|WP_103672703.1|1886761_1887654_+|IS630-family-transposase
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKTLHAAEKESDRVQQKRVEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRARGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>NZ_CP012375.1|WP_046661871.1|1887817_1888816_-|adenosine-kinase
MGKQYNVYGIGNALVDMEFQVSPELLQELGIDKGVMTLVDENRQTQLMEKLALDCKRSGGGSAANTLVAIAQLGGRGFYSCKVGNDELGKFYLQDLRACGLHTNEHGGEKEVGITGKCLVFVTPDADRTMNTFLGITGEISERELVPSAIANADYLYLEGYLVTSPTAKAAAIKGREIAQAAGVKTALSLSDPNMAIFFREGLLEMIGTGLDFVFANESEALTISGSEEIESAIAYFKTIAKGFAITRGANGSLIYDGENLLEIDSHPVEAIDTVGAGDMYAGAFLYGITHGMGYKGAGNLASLAAARVVSTFGARLQTEEIQSLRDSIVLG

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Crispr_ID: NZ_CP012375_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_11

2091610-2091731

Orphan

Consensus_repeat	Method
AGTATTGGCAGTGTTGGCAGTAT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP012375_11

>merge|NZ_CP012375|11|2091610-2091731|CRISPRCasFinder
AGTTTAGGCAGTGCTGGCAGTATTTTAAGTCTCGCTAGTGCCAGCAGCATTTTAAGTCTGGTTAGTATCGGCAGTATGCTCAGTATTGGCAGTGTTGGCAGTATTCTTAGTATTGGCAGTGT

>NZ_CP012375|11|11|2091610-2091731|CRISPRCasFinder
AGTTTAGGCAGTGCTGGCAGTAT	TTTAAGTCTCGCTAGTGCCAGCAGCATTTTA
AGTCTGGTTAGTATCGGCAGTAT	GCTCAGTATTGGCAGTGTTGGC
AGTATTCTTAGTATTGGCAGTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_002740011.1\|2092772_2092979_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_002802932.1\|2083235_2084534_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP012375.1\|WP_046662032.1\|2098376_2099411_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NZ_CP012375.1\|WP_046662022.1\|2084580_2085342_-\|DUF3887-domain-containing-protein	unknown	unknown	gnl\|CDD\|379023
NZ_CP012375.1\|WP_046662024.1\|2087814_2088684_-\|DUF4351-domain-containing-protein	unknown	unknown	gnl\|CDD\|316753
NZ_CP012375.1\|WP_002783777.1\|2080080_2080524_-\|RrF2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|273242
NZ_CP012375.1\|WP_046662031.1\|2096716_2097730_-\|folate-binding-protein-YgfZ	unknown	unknown	gnl\|CDD\|223431
NZ_CP012375.1\|WP_080949737.1\|2079659_2080133_-\|GFA-family-protein	unknown	unknown	gnl\|CDD\|226314
NZ_CP012375.1\|WP_046662026.1\|2089855_2091562_+\|potassium-channel-protein	unknown	unknown	gnl\|CDD\|224147
NZ_CP012375.1\|WP_046662029.1\|2093940_2094669_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|223979
NZ_CP012375.1\|WP_002757316.1\|2093377_2093944_+\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP012375.1\|WP_046662020.1\|2080824_2081214_+\|AbrB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372980
NZ_CP012375.1\|WP_046662030.1\|2094681_2096340_+\|NAD+-synthase	unknown	unknown	gnl\|CDD\|237577
NZ_CP012375.1\|WP_046662027.1\|2091930_2092542_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_046662033.1\|2100135_2102889_-\|class-I-SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223934
NZ_CP012375.1\|WP_046662028.1\|2093060_2093270_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_080949740.1\|2081886_2082636_-\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225414
NZ_CP012375.1\|WP_002802888.1\|2097726_2098095_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662025.1\|2088766_2089705_-\|DUF4351-domain-containing-protein	unknown	unknown	gnl\|CDD\|316753
NZ_CP012375.1\|WP_046662023.1\|2085457_2087536_-\|glycogen-debranching-protein-GlgX	unknown	unknown	gnl\|CDD\|224440

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046662029.1\|2093940_2094669_+\|NUDIX-hydrolase	gnl\|CDD\|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	4.10687e-24
NZ_CP012375.1\|WP_002802932.1\|2083235_2084534_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP012375.1\|WP_046662032.1\|2098376_2099411_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	0
NZ_CP012375.1\|WP_046662022.1\|2084580_2085342_-\|DUF3887-domain-containing-protein	gnl\|CDD\|379023	pfam13026, DUF3887, Protein of unknown function (DUF3887). This domain family is found in bacteria and archaea, and is approximately 90 amino acids in length.	4.17862e-10
NZ_CP012375.1\|WP_046662024.1\|2087814_2088684_-\|DUF4351-domain-containing-protein	gnl\|CDD\|316753	pfam14261, DUF4351, Domain of unknown function (DUF4351). This domain is found in bacteria, and is approximately 60 amino acids in length.	2.26081e-22
NZ_CP012375.1\|WP_002783777.1\|2080080_2080524_-\|RrF2-family-transcriptional-regulator	gnl\|CDD\|273242	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein. This model represents a superfamily of probable transcriptional regulators. One member, RRF2 of Desulfovibrio vulgaris is an apparent regulatory protein experimentally (MEDLINE:97293189). The N-terminal region appears related to the DNA-binding biotin repressor region of the BirA bifunctional according to results after three rounds of PSI-BLAST with a fairly high stringency. [Unknown function, General].	6.18556e-46
NZ_CP012375.1\|WP_046662031.1\|2096716_2097730_-\|folate-binding-protein-YgfZ	gnl\|CDD\|223431	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only].	7.8577e-57
NZ_CP012375.1\|WP_080949737.1\|2079659_2080133_-\|GFA-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	8.37358e-27
NZ_CP012375.1\|WP_046662026.1\|2089855_2091562_+\|potassium-channel-protein	gnl\|CDD\|224147	COG1226, Kch, Kef-type K+ transport systems, predicted NAD-binding component [Inorganic ion transport and metabolism].	2.45711e-22
NZ_CP012375.1\|WP_046662033.1\|2100135_2102889_-\|class-I-SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223934	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms].	1.15601e-18
NZ_CP012375.1\|WP_002757316.1\|2093377_2093944_+\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	3.61705e-60
NZ_CP012375.1\|WP_046662020.1\|2080824_2081214_+\|AbrB-family-transcriptional-regulator	gnl\|CDD\|372980	pfam14250, AbrB-like, AbrB-like transcriptional regulator. This family of DNA-binding proteins is likely to act as a transcriptional regulator. This family does not include E.coli AbrB, which belongs to pfam05145.	1.82818e-42
NZ_CP012375.1\|WP_046662030.1\|2094681_2096340_+\|NAD+-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	0
NZ_CP012375.1\|WP_046662027.1\|2091930_2092542_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	6.41268e-33
NZ_CP012375.1\|WP_080949740.1\|2081886_2082636_-\|SIMPL-domain-containing-protein	gnl\|CDD\|225414	COG2859, COG2859, Uncharacterized protein conserved in bacteria [Function unknown].	8.19467e-57
NZ_CP012375.1\|WP_046662025.1\|2088766_2089705_-\|DUF4351-domain-containing-protein	gnl\|CDD\|316753	pfam14261, DUF4351, Domain of unknown function (DUF4351). This domain is found in bacteria, and is approximately 60 amino acids in length.	9.09023e-23
NZ_CP012375.1\|WP_046662023.1\|2085457_2087536_-\|glycogen-debranching-protein-GlgX	gnl\|CDD\|224440	COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism].	0

>NZ_CP012375.1|WP_046662026.1|2089855_2091562_+|potassium-channel-protein
MKPQIIVCGLGRTGYKIFCLLKQQSAAVAAISDRQMVCEYQSDIIIGDPCSPQTLLQAGLPDAETLVLAIDNDALNLEILTRARIINPKIRIVNRLFNETLGERLDQTLPAHVSMSVASLAAPIFSFAALGNKAIGQLQLFDRLWPIQEIIIEENHPWWGLPLYELWDDPARMLIYYLPAHDEIDLVSAVLLGKKLQTGDHLIIGNKPTIKAKQRFKLQKWLRNLLNLRPYQHYVQPVILVTLSLLGMISLATITYLSVNQKISLVDSLYFSVGMITGAGGNEKVAESTPDSIKIFTVVMMIVGAGVIGICYALLNDFILGSRFKQFWDATRIPVRNHHIICGLGGIGTRIVRQLHEQGCEVVVIESDPNNRFLHSVRSWGIPVIIEDARLVATLETANINNAESLIVVTYEDMINVEIALTAKAIAPKINLVLRCSQEQFGRSIQEVFDFDTVLCPRDLATYSFAAAALGGRILGNGMTDDLLWVALATLITPNHPFMGQIIKEAAMNADFVPLYLEKQGQTIHGWQLLEITLDQGDILYLTMPAMRLQQVWQNTSLTIPQSFPDLK
>NZ_CP012375.1|WP_046662025.1|2088766_2089705_-|DUF4351-domain-containing-protein
MTRFLWDKFSKDYLETFLASSGDVKTSLDVTAETQEIDVYFRPTSPEIPPELGLLGKLAQTPCLLEPYRNPVTIEGILACLSKLLTVREQLQREAHRHQQPLLAENIPRLWILTPTASQRIITAFSALNHPDWGEGIYFLPPALTTAIIVLHQLPETPETLWLRLLGRGGTRSRAIDELEALSSNHPFKSASLKLLYNLSRNLQALPKRTQEERKFIMRLAPLYEQDREKAIQQGEAIGLQKGRIEGIQQGEAIGLQKGEANLVLRLLNRRFGELPPHITETIQKLSVEKLEDLGEALLDFETQADLINWLN
>NZ_CP012375.1|WP_046662024.1|2087814_2088684_-|DUF4351-domain-containing-protein
MKDYLETFLSSSGDVKTSLDVTAETQEINVYFRPTSPKIPPELGLLGRLAQTPCLLEPYRNPVTIEGILACLSKLLTVREQLQREAHRHQQPLLAENIPRLWILTPTASQRIITAFSALNHPDWGEGIYFLAPALTTAIIVLHQLPETPETLWLRLLGRGGTRSRAIDELEALSSNHPFKSASLKLLYNLSRNLQALPKRTQEERKFIMRLAPLYEQDREKAIQLGEAIGLQKEASKLVLRQLKRRFGELPPHITETIQKLSVEKLEDLGEALLDFESQADLINWLNQA
>NZ_CP012375.1|WP_046662023.1|2085457_2087536_-|glycogen-debranching-protein-GlgX
MTLKTDHGKSHPVGATVLADGVNFSLFSKYATAIELLLFDDANSPVPSRTILLTPQTNRTFFYWHIFVHGIGVGQVYAYRVYGPDNPAQGHRFDPDKVVLDPYAKAIVGAEIYDRQAASEKGDNCHRALRGLVVDTGCYDWEDDEPLRTPYSASFIYEMHVGGFTRNPNSGVSEEKRGTFAGLIEKIPYLKNLGITAVELLPIHYFDPAAAMPGLTNYWGYSTIGFFAPHAGYSSDRSPLGPLNEFRDLVKALHKAGIEVILDVVFNHTAEGDEIGPTLSLKGIDNRTYYILDAVDKSLYSNYTGCGNTLKGSHPIVGKMILDCLRYWVSEMHVDGFRFDLAAVLSRNVDGEPILQKGYNMIWAIESDPVLAGTKLIAEAWDAAGLYSVGQFVEFADWFSEWNGPFRDDVRAFVRGDTGIVRKLAARILGSPDIYHRPDNDVNRSINFVTCHDGFTLNDLVSYDEKHNEANGEKNRDGCNDNFSWNCGIEGETNNEAIKTLRLQQIKNLLTILFISQGTPMLLMGDEVRRTQKGNNNAYCQDNQLSWFDWSAVEQEFDLWCFVRRLIDFNKKLALFRQEKLLEVTYTSLEPHLSWHGVQLSKPDWSEDSRSLAFSLRYPKANEYLHIMLNAYWESLNFQLPPLFPEEKWHRVIDTAGQLSEAACDLDAAAAIESETYRVQARSAVVLIVKPV
>NZ_CP012375.1|WP_046662022.1|2084580_2085342_-|DUF3887-domain-containing-protein
MMQLSLAKRVSILSLCLIGFTLPLTTFNVSPVQANLEPTAIAIGDPVREEKQARQLVQWLGTKQYDKVIAALSPQLKPLWTAEKLQKVWESQVIDHTGPFKRIVKSKLLDAINANLVIVTVEFEKITEDVVITFNRSGQVIAADFPEFRSISEIGAAFVKALVNKDYGLARGFLHPLLKAEVFPTRVQGAWENLLKRTGPVRRVVGTQVRKGADTDGVDLVLVTIQFEKLTDTLILVFDDQKQIVNVDFPLGN
>NZ_CP012375.1|WP_002802932.1|2083235_2084534_-|phosphopyruvate-hydratase
MLDKIEVPIEAIAAREILDSRGRPTIEAEVLLESGAMGLAQVPSGASTGSFEAHELRDDDPQRYGGKGVLKAVRNVHEKIVPVLEGMNAFDQASIDLAMIDRDGTANKRELGANAILAVSLATAKAAAADLGLPLYRYLGGPMANVLPVPMMNVINGGSHADNNVDFQEFMIFPIGADSFKEGLRWGAEVFAALGKALHERKLLTGVGDEGGYAPNLGSNQEALDILIESIERAGYKPGSQVALAMDVAASEFYKDGQYIYDGSSHSPAEMVDFLASLVDRYPIISIEDGLHEEDWDNWKLLTDKLGARIQLVGDDLMVTNPIRLQRAIDLGIANSILIKLNQIGSLTETLQTIALATRHGYRSVISHRSGETEDTTIADLAVATNAGQIKTGSLSRSERVAKYNRLLRIEEELGDRAVYAPKVGLGPKFLA
>NZ_CP012375.1|WP_080949740.1|2081886_2082636_-|SIMPL-domain-containing-protein
MKDSSIFQRFPQVFAGLSMLSIALVLSSWIAARSFLEVKRAGDVFVVTGSAKRAITSDYLLWRLSVSSQQPSAQDAYRDLIRQTERIRAYLKEKQVPEDAITTNAIETMPIPEVTANGQETGQILAYRLTQRFEIRASDVARYTELSRQVTELIEEGISLVSEPPQYLYTQLDQLRVEMVAAATKDARARAEAIASSTGSRVGRVRDAKTGVFQITSRNSTDVSDSGIYDTSSIDKDITAVVSITFGID
>NZ_CP012375.1|WP_046662020.1|2080824_2081214_+|AbrB-family-transcriptional-regulator
MNKTTNPEPLTGLELIEKVKQLGNLSKEEKARECGYYTMTKNGIERVNMMKFLNALIDAEGIDLDSSANGQGRGGRSASYRISVQSNNNLLIGSAYTKKMGLKPGDEFEITLGRKHIHLKQVGASDDDE
>NZ_CP012375.1|WP_002783777.1|2080080_2080524_-|RrF2-family-transcriptional-regulator
MKLTTRGHYSVKALLDLSLQPRGTPVSVKSIALRQDIPAAYLEKLLIEMRRAGLVRSFRGAQGGYQLARPANRISLGQILEAVGETIEPLSGYHPRDEQAEDWVTFTIWKHLHEKLKEALGKITLADLYYDARSWIAARGEETSFIV
>NZ_CP012375.1|WP_080949737.1|2079659_2080133_-|GFA-family-protein
MRVAGSPLGERKPALLFSSLEVMTATTQAKIYGGGCHCGAIRFQVAIEHNQGLDCNCSICQKKGFLHLIVPSAQFTLLSGEDFLSTYTFNTHTAQHYFCRVCGIHPFYRPRSHPDAIDINLRCLDGNVLGDFQIQFFDGANWEDNIEKIRDIDGKRE
>NZ_CP012375.1|WP_046662027.1|2091930_2092542_-|Uma2-family-endonuclease
MIIAQEKPTIATVTKTPVTLEAYRAIAENSQERYEYCHGEMILMPGGTATHSAIAINISVFLGFLLRDRDFRLYNSDLRLWIPEYNCGTYTDLMVVNHEPEFNGDRKDEILNPLFIVEVLSPATEADDRGDKFRKYRSLPSFCEYLLVSQTEPYIEQYFRLAQSDRWQLQTYDQLSQIIPLESLNVELPLLEIYRRVSFAAAS
>NZ_CP012375.1|WP_002740011.1|2092772_2092979_+|hypothetical-protein
MKSEYDLANMKSRPNPFAQQLKRQVTLPLRIDVIDFFEKKAKEKGISYQELIDLYLQDCVTNDREISF
>NZ_CP012375.1|WP_046662028.1|2093060_2093270_+|hypothetical-protein
MSQASIQCLSDENGETIAAVVPIDLWREIESERETAYLLSSEVMKERLLTAKSRQGGMKLEEVCEKLGI
>NZ_CP012375.1|WP_002757316.1|2093377_2093944_+|nicotinate-nucleotide-adenylyltransferase
MLKIALFGTSADPPTAGHQAILKWLSEQYDIVAVWAADNPFKNHQTSLEHRLRMLNLLIRDIQPPRDNIQLRRELSDRRSLISVEKAQTIWGEQEEYTLVIGSDLAGQIRHWYRSQELLEKVKILVIPRPGYPINQDDIEQLQTLGGDCLIADVFAPAVSSTDYREKGDKQAVPAPIKDYIEGQKLYA
>NZ_CP012375.1|WP_046662029.1|2093940_2094669_+|NUDIX-hydrolase
MKPPKTLANKSLADFKVGVDNVIFSVDTQLNRLLVLLIKRREEPFSNYWSLPGTLVRNGESLETAAYRILAEKISVNNLYLEQLYTFGSPEGDSPAASESFGKRYLSVSYFALVRFEEAKLITERDHNITWYMIDKVPDLAFNHGQILEYGWRRLRNKVEYSPVAFEVLPELFTLNDLYQFYETILGKNFSDYSNFRNRLLKLGFLKDMGLKVSRGAGRPASLYRFDEKAFAPFKDQPLVFV
>NZ_CP012375.1|WP_046662030.1|2094681_2096340_+|NAD+-synthase
MRIAIAQLNPIVGDIEGNAQRILEAAQTAFNQGAELLLTPELSLCGYPPRDLLLNLGFVEKMSRQLQLLSQQLPEKLAVLVGFVEKNPSATVRGEKPLFNSIALLKSQEIKQIFTKRLLPTYDVFDEDRYFASGKESQYFQLTENNVKIGVTICEDVWNDEQFWGQRQYAVNPIADLANLGVDLIVNLSASPYSVGKQKLRESLLSHSATRYNLPIVYVNQVGGNDDLIFDGDSVAFNRQGEVIYRAQAFTSSLELIEFNQDLLPAVIHPLPVDEDEEIYRALVLGVRDYVQKCGFKRVIFGLSGGIDSSLVAAIASDALGKENVLAVMMPSPYSSDHSISDAVALVNNLGIKSEKLAIQEIMTAYDQLLDGLFAGTDFGIAEENLQSRIRGNLLMALSNKFGHLLLSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCRWLNRHGEIIPLNVINKAPSAELKPNQKDQDSLPPYEILDAILALLIDRHQSAEQIIAAGFEAEIVQKVIKLVKNAEFKRKQAPPVLKISDRAFGTGWRMPIASRWG
>NZ_CP012375.1|WP_046662031.1|2096716_2097730_-|folate-binding-protein-YgfZ
MKADLETIKAEYAANFLKDYHNDPQSLASQTILIDRSDWGLLELKGQDRLRFLHNQTSNAIDRLKPGQGCETIFLNSTGRTLDFVTVYAGDDSLLILVSPQRRQFLLELIDRYIFPFDKVEISDLTDNFGIVTLIGTESGQYLQKIAIPEQILTGVQHSHYLLSQPALRVAVGTGLDLPGYTLIVAATEAGPLWENLIKNGVTPADEQVWEYLRIHQGRPAVDRELTEDYNPLEAGLWRAIVFDKGCYIGQETIARLNTYKGVKQRLWGIKLSQPVPSNTPIILEAQKVGLLTSVLEDFGLGYVKTKAGGEGLKVQIGEATGELIPLPFLSHEYPFQ
>NZ_CP012375.1|WP_002802888.1|2097726_2098095_-|hypothetical-protein
MNPKFKDITAWEQAQLLMQPAFIRVLDNLRKQLENSLWKGTYTEIQDPYPSYLLCLTYLDRSVTVNIWELCFQVCFLDYPTDEGESVTIDTSLLDPTGELDWQSLETKTERIIKQLFANLPP
>NZ_CP012375.1|WP_046662032.1|2098376_2099411_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MTKVRVAINGFGRIGRLVFRAGIQNPDFEFVGINDLVPSDNIAYLLKYDSTHGRFQGTVEAKEDGIVVDGKFIPCYSIKDPAQLPWGATGADYVVESTGLFTTAEGAGKHLEAGAKRVVISAPTKDPDKIRTIVLGVNDNEYDPAKDMIVSNASCTTNCLAPITKVINDNFGLAEGLMTTVHSMTATQPTVDGPSKKDWRGGRGAGQNIIPSSTGAAKAVTLVIPSLKGKLTGMAFRVPTPNVSAVDLTFKTEKATSYEEICAAMKAASEGPMKGILGYTDEEVVSSDFITDPRSSIFDAKAGIQLNANFFKVVSWYDNEWGYSCRMLDLMKMMAAKEATLVTA
>NZ_CP012375.1|WP_046662033.1|2100135_2102889_-|class-I-SAM-dependent-DNA-methyltransferase
MPLSWNEIKNRAIAFQKEWQGETSEKAESQSFWNEFFHVFGISRRRVASFEQPIKKADNKQGFIDLLWKGTILVEHKSKGKDLEKAPQQAKDYFPNLKEHELPRYILVSDFQRFKLYDLDSGNQWEFELSNFVDNVHLFDFIAGYEKRVYKDEDSVNIQAAELMGKLHDCLKEIGYMGHDLEVYLVRLLFCLFADDTGIFNQGIFWEYIDIHTKEDGSDLAMHIASIFQVLNTPEEKRLKNIDENLTQFPYINGKLFEESLPLAAFDSKMRVMLLEACAFDWGKISPAIFGSMFQAVMNPKERRNLGAHYTSEKNIQKVIKPLFLDDLHREFEKIKGHRNKLLEFHKKIANLYFLDPACGCGNFLIITYRELRDLEILVLQELDKTGQLVTDISAIIQVDVNQFAGIEYDEFAVRVAEVAMGLIDHQMNIKVSNTFGQYFVRLPLKKAAKIVNGNALRIDWEEVISKEKLNFILGNPPFVGKQLQNADQKADMNHVLGDIKGAGVLDYVTAWYIKAAEFIQNSLIRCALVSTNSISQGEQVGIIWQELYQKYKIKIHFAHRTFSWSNEAKGNAAVHCVIIGFGLEDIDNKRIFDYADIKGEPTERKVKNINPYLVEGNDLVILSRRKTISSVPEINFGSMPNDGGHLILLQSEKEELVKNEPDADKWIRRYTGAQEFINGYSRYCLWLADIQPQELKKSKEIYRRVEEVRKVRSESNRKTTQELSKFPTLFGENRQPDTNYLLVPRVSSERRKYIPIGFFSPDYIASDSCLFVANADLSLFGILTSEMHMAWVKYVCGRLKSDYRYSNTIVYNNFPFPENITDKQKQTVETCAQAVLDTRAKYPDSSLADLYDHLTMPPDLLKAHQKLDKAVDLCYRPQLFTSELNRIEYLFELYEKLTAPLLPTSKQKATRRKNYQ

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Crispr_ID: NZ_CP012375_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_12

2268337-2268433

TypeV

Consensus_repeat	Method
TCAGTAAACAGTAAACAGTAATCAG	CRISPRCasFinder

1 spacers

cas14k

The CRISPR arrays of NZ_CP012375_12

>merge|NZ_CP012375|12|2268337-2268433|CRISPRCasFinder
TCAGTAAACAGTAAACAGTAATCAGTAAACAGTAAACAGTAATCAGTGAGACACTGTTGATGGGAGTTTTTTTCAGTGGTCAGTAAACAGTAAACAG

>NZ_CP012375|12|12|2268337-2268433|CRISPRCasFinder
TCAGTAAACAGTAAACAGTAATCAG	TAAACAGTAAACAGTAATCAGTGAGACACTGTTGATGGGAGTTTTTT
TCAGTGGTCAGTAAACAGTAAACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046662138.1\|2260265_2262452_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|365904
NZ_CP012375.1\|WP_046662143.1\|2270861_2271338_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|283241
NZ_CP012375.1\|WP_103672709.1\|2270661_2270811_-\|lmo0937-family-membrane-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662131.1\|2244825_2246961_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_066029841.1\|2272762_2275072_-\|NACHT-domain-containing-NTPase	unknown	unknown	gnl\|CDD\|227922
NZ_CP012375.1\|WP_046662141.1\|2269038_2269455_-\|YggT-family-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029839.1\|2262521_2267126_-\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968
NZ_CP012375.1\|WP_066029842.1\|2275095_2276670_-\|B12-binding-domain-containing-radical-SAM-protein	unknown	unknown	gnl\|CDD\|379101
NZ_CP012375.1\|WP_046662140.1\|2267426_2268314_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|223152
NZ_CP012375.1\|WP_002752242.1\|2271630_2271813_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_CP012375.1\|WP_046662137.1\|2256559_2260024_-\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|227226
NZ_CP012375.1\|WP_066029840.1\|2271984_2272761_-\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
NZ_CP012375.1\|WP_046662136.1\|2254096_2255923_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_CP012375.1\|WP_046663713.1\|2279666_2280260_-\|IS607-family-transposase	unknown	unknown	gnl\|CDD\|239738
NZ_CP012375.1\|WP_066029835.1\|2248767_2250690_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP012375.1\|WP_046662142.1\|2269638_2270502_-\|cyanophycinase	unknown	unknown	gnl\|CDD\|131124
NZ_CP012375.1\|WP_066029836.1\|2250987_2252193_-\|FAD-dependent-hydroxylase	unknown	unknown	gnl\|CDD\|236001
NZ_CP012375.1\|WP_046662148.1\|2278456_2279695_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14k	-	gnl\|CDD\|223747
NZ_CP012375.1\|WP_066029837.1\|2252400_2253243_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|215135
NZ_CP012375.1\|WP_149039028.1\|2247632_2248412_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046662138.1\|2260265_2262452_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|365904	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase.	3.24182e-95
NZ_CP012375.1\|WP_046662143.1\|2270861_2271338_-\|CsbD-family-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	4.1615e-09
NZ_CP012375.1\|WP_046663713.1\|2279666_2280260_-\|IS607-family-transposase	gnl\|CDD\|239738	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subfamily is composed of proteins that catalyze the transposition of insertion sequence (IS) elements such as IS607 from Helicobacter and IS1535 from Mycobacterium, and similar proteins from other bacteria and several archaeal species. IS elements are DNA segments that move to new sites in prokaryotic and eukaryotic genomes causing insertion mutations and gene rearrangements.	1.627e-42
NZ_CP012375.1\|WP_046662131.1\|2244825_2246961_+\|hypothetical-protein	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	1.83445e-141
NZ_CP012375.1\|WP_066029841.1\|2272762_2275072_-\|NACHT-domain-containing-NTPase	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	1.3486e-176
NZ_CP012375.1\|WP_066029839.1\|2262521_2267126_-\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NZ_CP012375.1\|WP_066029842.1\|2275095_2276670_-\|B12-binding-domain-containing-radical-SAM-protein	gnl\|CDD\|379101	pfam13282, DUF4070, Domain of unknown function (DUF4070). This is a bacterial domain often found at the C-terminus of Radical_SAM methylases.	6.19947e-63
NZ_CP012375.1\|WP_046662140.1\|2267426_2268314_-\|CoA-binding-protein	gnl\|CDD\|223152	COG0074, SucD, Succinyl-CoA synthetase, alpha subunit [Energy production and conversion].	3.69623e-78
NZ_CP012375.1\|WP_002752242.1\|2271630_2271813_-\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	4.92518e-08
NZ_CP012375.1\|WP_046662137.1\|2256559_2260024_-\|N-6-DNA-methylase	gnl\|CDD\|227226	COG4889, COG4889, Predicted helicase [General function prediction only].	2.67676e-25
NZ_CP012375.1\|WP_066029840.1\|2271984_2272761_-\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	4.58931e-35
NZ_CP012375.1\|WP_046662136.1\|2254096_2255923_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.18468e-49
NZ_CP012375.1\|WP_066029835.1\|2248767_2250690_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.33229e-76
NZ_CP012375.1\|WP_046662142.1\|2269638_2270502_-\|cyanophycinase	gnl\|CDD\|131124	TIGR02069, cyanophycinase, cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. [Energy metabolism, Other].	8.78936e-112
NZ_CP012375.1\|WP_066029836.1\|2250987_2252193_-\|FAD-dependent-hydroxylase	gnl\|CDD\|236001	PRK07364, PRK07364, FAD-dependent hydroxylase.	0
NZ_CP012375.1\|WP_046662148.1\|2278456_2279695_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.70413e-24
NZ_CP012375.1\|WP_066029837.1\|2252400_2253243_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|215135	PLN02244, PLN02244, tocopherol O-methyltransferase.	3.28671e-126

>NZ_CP012375.1|WP_046662140.1|2267426_2268314_-|CoA-binding-protein
MKWTDKDQIIMQGIDRPLGKYYAARLKAQGTCLVAGVASGHGGEIIAEIPVFDLVAEAVAEAGEIKTSLILVPPNQVLDAALEAIAAAITQLIIVTPGVPPLDLVELLKIASTTGTLILGPGSQGVIIPNYLWLGICEPSFYQSGTIGLITRGDRIGDEVAKTLTAAGYGESMAVNLGTDGIIGSNLSQWLQVFEEDENTEAILLVSQVGGKSEIEAAKYIASAIEKPVIAYLVGLNTAIETNFGDTETIISNQLSYSVAAKNTRKDSLRHFQEAGVTVVEKLADLPTSLAKVLS
>NZ_CP012375.1|WP_066029839.1|2262521_2267126_-|glutamate-synthase-large-subunit
MAQQNNLKTDNIHQIDPYWGPRWLVEERDACGVGFIADVRGSGSHQLIEQALLALGCLEHRGGCSADQDSGDGSGMMTAIPRDVLAPWFAENGLNMPESERLGVGMVFLPQADRERAEAKAHIEEIVNKYNIKILGWRAVPVHPQVLGRQARENQPYVEQILVTSPDLAGSQFDRLLYIARSEVGKQLADDFYFCSFSCRTIVYKGMVRGEILREFYLDLQNPAYSSQFAIYHRRFSTNTQPKWPLAQPMRLLGHNGEINTLLGNINWMSAREPALETQGWTHEELQSLTPIVNPANSDSYNLDSALELLVRTGRSPLEAAMILVPEAYNNQPDLQDYPEIIDFYEYYSGLQEPWDGPALLVFSDGGIVGACLDRNGLRPARYSITNNGYIVVSSEAGTIPLDETTIMEKGRLGPGQMLAVDLEKGEIKRNWQIKQEIARANPYGEWVKSQRTLIDKETAIDIPAPSHLLPLQTAFGYTAEDVDMIIVPMAEQGKEPTFCMGDDTPLAVLSSKPHLLYDYFKQRFAQVTNPPIDPLRESLVMSLTMYLGRRGNILKLGVDDAHLLKLDSPLLNNAELAKVKTSSYKTAELSTLYDLTTGPGGLEYAIANLCAEAAKKVASGAEILILSDRTASIDEKTSYIPPLLAVGAVHHHLIRSHLRLKASIVIDTAQCWSTHHFACLIGYGASAVCPYLSLETIAQWWIEPKTQKLMENGKLEAISLEKALINYRKSVEAGLLKILSKMGISLLSSYHGAQIFEAIGLSADLVKLAFNGTTSRVGGLSIAEVAQEAIAFHSKAFPNLTAKKLENYGFVNYRPGGEYHMNSPEMAKALHKAVAAHSQGEGYDHYETYRQILQERPVTALRDLLEFNSDRASIPLEAVESIESILQRFCTGGMSLGALGREAHETLAIAMNRIGGKSNSGEGGEDPIRYTSLSDVDAEGHSVTMPHLNGLKNGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKVSPYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPRAKVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRMLMENQLRHRVILRADGGLKTGWDILMAAVMGAEEFGFGSISMIAEGCIMARVCHTNNCPVGVATQQERLRARFPGIPAHVVNFFTLVAEETRQLLAKLGYHSLNEVIGRADLLKVRSDARLTKTESLNLDCLLNLPDGRGDRSWLQHEEVHSNGAVLDDDILADSEIKQAIEQQGTVSKTYRIVNTDRSVGARIAGVIAQKYGNDGFEGEIKLNFQGAAGQSFGAFNLPGVNLHLEGEANDYVGKGIYGGEIVILPPQNANYQPEDNAIIGNTCLYGATGGVLYANGRAGERFAVRNSTAKAVIEGAGDHLCEYMTGGVIVVLGSVGRNVGAGMTGGLAYILDPSLPEKLNPEIVKIQRVATAAGAEQLKSLIEAHVERTNSPKGKLILANWDSYLGQFWQVVPPSEADSPEAQISAEKTLTSV
>NZ_CP012375.1|WP_046662138.1|2260265_2262452_-|DNA-cytosine-methyltransferase
MTNEKLRFIDLFAGIGGFRLAFESVGYDCVYSCEIDENCRKVYFNNFQEIPDQDIRKIAIHDLPDFEVLTAGFPCQPFSISGKRAGFRDTRGTLFFHICEIVELKKPKIILLENVKHLIHLDKGKNLDIILHSLEELGYLVDYKLLNAKDFGVPQNRERIIIIATQNKKFNFNSLKYTSPIPKLRDFLSPQGNFEYLDKKEYTLIDNPTLQPSGLIFVGYRNKTIWKKGIRPNTEHLSRVHHQPNRIYSIDGVHPTIPSQETSGRFFIYIPEQDQVRKLTIQECYRLMKFPDSFQIHPNLAESYKQVGNSVCIPMIQELAIAIKKHIFENNSRVSLKEFSFSRQNIQLEIIGLDFMNHKEKLLDIYDQSLNLDDRQPLLPQPYQNYIQQIATNCSKKKGVYTVLITLLVHKILYPNQDIRYHQTNLPGGFSGRTIDTQYITPTLKQLGLPAMAESGWLTRSLEQPFPYTLDYQGKISNQKTKDAFLGLIDFIETNPQQAEVILTLLLHQVNQIIQTQKIKILKIDNPEPFDINTLSSCLENHFSFNYQTRGASKLPVLALYAIYQRLIIEVERYKSCTLKPLGSHTASDLTSGSAGDIEIFDKNKQLVEVIEIKHGKYIDLQILRIAKDKIIKFNPRRYYILSSFDVKPTEVELIMSEIQTIKNNHGCQIITNGIIPTIKYYLRLISSPEEFVNSYSHLIEIDSELQTIHKLKWNEILSNLISPIEQI
>NZ_CP012375.1|WP_046662137.1|2256559_2260024_-|N-6-DNA-methylase
MNPLVNYFRNLQEIHSSQAAVKETSYYGTLETLLNEIGKTLKPRVRCIINLRNQGAGLPDGGLFNVDQFPKNQELEPFTAIFPERGAIEIKGTKEDIKKIAASEQVQKYWQKYGQVLVSNYRDFLLIGRNSQGQPVELEAYSLAPSEAEFWLKTSNPSKFAAEHGDSLLEYLKRVLLQAAPITSPADVAWFLASYARDAKARLEHHSDLPALANIRQALENALGIKFEREQGNKFFRSTLVQTLFYGLFSAWVLWHKQNLNREDKEDKFDWKSAAHHLHVPMLAILFEQIAAPSKLKSLGLVEVLNWTGAALNRVRREEFFRQFDEGQAVQYFYEPFLQAFDPDLRKELGVWYTPPEIVRYMVARVDRVLREELNIEDGLANPDVYILDPCCGTGAYLVEVLRYITDTLQENGAGALAMALVKKAAIERIFGFEILTAPFVVAHLQLGLFLQSLGVPLIEDSERVGIYLTNALTGWQPPDEESKQKIQQLQLSFPELNKEREAADEVKRGKPILVILGNPPYNAFAGTSPAEEAGLVELYKQGLISDWGIKKFNLDELYVRFFRLAERCISENTGKGVVCYISNFSYLGDPSFVVMRQRFLQEFDRLWFDCLNGDSRETGKLTPEGNPDPSVFSTQYNKEGIRVGTTIGLMVRKEVRNKNVDVYFRHFWGVAKREQLLDSLNNQDFDSLYQVSNPEQSNRYSFRPSDVSSHYLAWPKLTDLSDEAPITGYKENRGYSFIDSDKTILSERISKYFDQNVSWEELASLNTGLTKDAARFDAKKARDKVLKLREKFNPQMLLPYLLRPYEVKWCYYTQIRPLWNESRPSLFIHQFQGNSFLVSRPAGVASPEGIPFYFTNCLGDFDFIRGHAYHFPIRLRQNSEKVKTEDNTQGKLFDSSNLNIPSIKANLSEKSRQYLNELGINNLDENIENASLIWLHSLAIGYSPLYLGENADGIRQDFPRIPLPNSQELLIKSAELGQVIASLLDTEKPVIGVTKKPTPALQKIALISCTDGGNLNPDKGDLIINVGWGHGGKNGVTMPGKGKAIARQYTTAEMSVISPEMRKLLGTTTYDIYLNDRAYWQNIPVRVWEYTIGGYQVIKKWLSYREEKLLGRGLTIAEVQEVSEMTRRITAIILLESDLDDNYQNIKTAVYSF
>NZ_CP012375.1|WP_046662136.1|2254096_2255923_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MTSATPEQNYTAESNRVRYSVALLGLALSLGVPSILNSTSESAQAANSVPLEWELIDLSPKAKDGGKELKEPQIIPSQALATVKFIATSVVEHQVKPGESLWSLADTYQTTPTAIATRNNLSPHSDLIIGQTLKIPTPEQLPPAAPAATPEQLDSSSASLRQTRQRLQESLAALRTEETPHQSHSGETVIVTETTALVPDNSPTSVEIPVIAPEESPQPTSQVIPIPVPTPESDRPIATIPLNPPLTSRPEIPSVALRNPAPVTEIPAVPNPRVIVPPENQVYRVRPGDTLNTIARALGITPAELARENGIDNPNRIKVNQTLVVPDRSANARVNQNLTPLVGERPRLSFNPSNRQNPPAETVTTETEEFPENITGSYRERLRQEVANLRETNLSETQKSIAIPVDNPPETVEDRQITANPQWTALRSRSNQSNPPQIIGSAPTNVEEYNDRLRIPVGETVEPSLPPLANPDEHLPNPAPIFTGFIWPTRGVLTSGFGWRWGRPHRGIDIAGPVGTPVVAAAAGEVISSGWNSGGYGNLVKLRHPDGSVTLYAHNSRLLVRRGQTVEQGEPIAQMGSTGFSTGPHLHFEVHPSGQGAVNPMAFLPGRR
>NZ_CP012375.1|WP_066029837.1|2252400_2253243_+|methyltransferase-domain-containing-protein
MELYQRIADFYDSSSGLWERIWGEHMHHGYYGRSGKIKLDRRQAQIDLIEELLTWGAVTGANQILDVGCGIGGSSLYLAEKFHSQAVGITLSPVQAARASQRAQEFNLEEQVSFCVADALKTPFPDDNFDLVWSLESGEHMPDKRQFLRECYRVLQPGGTFLMATWCHRPTTSLAGNLTEGEIKLLNEIYQVYCLPYVISLPEYADIARDIGFRDLKTDDWSLSVAAFWDVVIDSALSTDAIAGLLASGYTTIQGALSLGLMRRGYESGLIRFGLLQGKK
>NZ_CP012375.1|WP_066029836.1|2250987_2252193_-|FAD-dependent-hydroxylase
MLGRDSYDLIIVGGGIVGTTLAVALKNTGLNIAMIEERPLEVAASRRQAYALSLMSSRIFTGLGIWDKISSSIGKFRHIRLSDADFPIFVPFVVDELKTDYLGYVGEHQVILTALHKASQDCDRIDWLSPAKVLEVEYGAETATVTLEEAGQTRKITTKLVIGADGARSAIRQGAQIKTKGWKYWQSCVAFTIKHQLDRNDTAFERFWPTGPMGILPLQGNRCQIVWTNPHGEAKKLQEMPEGEFLDKLEAYTGGLLGKLELVSSRALFPVQLMQSDTYVKPRLALIGDAAHCCHPVGGQGLNLGIRDAAALAQVLKEAVEKQEDIGALSTLKSYEKWRRSENLAILGFTDFLDRLFSNNWPPIVVIRRLGLAMMRGFPPLKLFALQLMTGLKGRIPQLAR
>NZ_CP012375.1|WP_066029835.1|2248767_2250690_-|S9-family-peptidase
MSHQISAYGSWKSPITSDLIVAASISLGGVTLDGEDIYWLEGRPQEKGRNVLVKLNPDGTTTEITPAPFNVRTRVHEYGGGSYLIVAGIIYFCNFADQRIYRQTAESLPQPLTPENSCRYADLILDEFRNRLICVCEDHSQKDREPVNSIVSIDVDTGEIKTLVSGDDFYTSPRLTADGSRLAWISWNHPNMPWDSSFLWVADINNLYLSNIRVIAGGENESVCEPRWSADQQLYFTSDRNDFWNFYCFNHDEQIEQVLEPIEAEFAYPHWVFGLSNYGFAGESQIICSYTKDGRCYLGSIDTVNREFREIIIADTNISSLQVSDNKIVFIGGSFREVTAVISMDLATGTREVLKSSSNLTISSDYFSIPEMLAFPTSQGLTAFAWYYPPKNPDYTAPNGELPPLLVKSHGGPTAAATSSLSLRVQYWTSRGFGYLDVNYGGSTGYGRQYRQRLLGNWGIVDVEDCINGAKYLVNQGLVDGERLAISGGSAGGYTTLAALTFHDTFKAGASYYGVSDLEVLATDTHKFESRYLDKLVGRYPEEKEIYYQRSPIHFTAQLSCPVIFFQGLEDRVVPPNQAEMMVEALKAKGLPVAYVPFAGEQHGFRQAESIKRALDAEFYFYSRLFGFTPADNLEPVEIK
>NZ_CP012375.1|WP_149039028.1|2247632_2248412_+|hypothetical-protein
MQDTQILFLLTAIVLILGVPFLILKRVSLSQNQEKYQTFCFVYYSLFIWAASSYSIIRPGNGFTHYLLFLIIPSGFLIGVFIGELAQVLQVSKLTRSNLNFSLLTGVIFITVASSFLQFATTITSDNVYLNNRRRFARNYLSPIAKTILKYASPGESMAVWGWASELYVDTGLVPAIRDSVSLWQIKPGSLQEYFLQRYAEDFINSNAKLFVDAVAPRMFFFTDRQTQGHEVFPEIARVINENYRLVDEVQGVRIYLKK
>NZ_CP012375.1|WP_046662131.1|2244825_2246961_+|hypothetical-protein
MWHPDAYQALIAENYPQVAAIYEELIDNNPENISDYWYLGVAYLLQNLEAEAQVMWQNVLRGGNPEEVKQWQAELEAVLDAEARRQQRKGDLAAVEYFRYHLQEIVPKSINNLLALFDLALDLEIFAPGELLNYPIQENLRYNPDRELLLNVVLKSLLYPHELTLDLAQASLPYLGELADSFIPQAFQISARVTNEQQSPAFGVEIIKLCLQLRPNDLSLLEQLVNLYILAEDFDNSLITAYQLREICLTPTLKLYSNYLILLILLRWGVWQEIDHIYQEYQNLLQELTRQKNITLEPIIKTSFLNISSPLPYLGDRALANRQLTNRIAEIFLDNNSLKTPLVTSKKASGKLTIGYLASTLKHHSVGWLSRWLIRHHDREKLQIAIYTINQEEDEITRQWFRDSRDIIRHFPHAQNPLEVAQQIQQDQIDILVDLDSLTHNLTNQIMALKPAAKQVTWLGWDASGLATIDYYIADPYVLPQQAEEYYREKIYRLPETYLAVDGFEIGTPNLRREDLEIPPDATIYFSVQSGMKRHPDTIKLQMKILAQVPNSYFLIKGVGKTEKIQELFTEIAIREGVNPQRLRFLPRDIDEYTHRANLQIADVVLDTYPYNGATTTLEVLWQGIPLVTLVGEQFSARNSYTFMINAGIEAGIGWNEVEYIHWGVKLGLDRSLRQDISHQLLGNRDTAPLWQGKKFAQNMENAYLKIWQGN
>NZ_CP012375.1|WP_046662141.1|2269038_2269455_-|YggT-family-protein
MNHDRDDETNLERRQELLHDEEAFRLDQEEKRLRSARRSNTLNWIINSIFVLAGIVQIPLVMRFLLRLFGANPQNQFAQLINHLSAPFIEPFSTLFISPASSGGANIFDVNIVIAIIAYALLSYTLHGYNLHFFLKSL
>NZ_CP012375.1|WP_046662142.1|2269638_2270502_-|cyanophycinase
MESTKERGQLIIIGGAEDKEGDCQILREFVRCAGGTKAKIAVLTAATSEPRSAGEAYTRVFERLGVEDVRVLDTIHREDADDPENLKIIEEATGAFFTGGDQALIIEHIKGTQLDTLLHQRNREGMVVGGTSAGAAIMPDLMIIEGDSETNPRMDAIDMGPGMGFLHSVVIDQHFAQRGRLGRLISALLQQPANLGFGIDEDTAVIVDGDEFKVVGRGAITVVDESEATYDNLDELLKDEAMAVCGVRLHILPQGFRFNLKTRKPVFSRSIELKDSNPKKEAEVERE
>NZ_CP012375.1|WP_103672709.1|2270661_2270811_-|lmo0937-family-membrane-protein
MFDLVWTAVVILFILWLLGFSVNIGGGLIHLLLVLVLIGVVYNLFMRRR
>NZ_CP012375.1|WP_046662143.1|2270861_2271338_-|CsbD-family-protein
MSLQQIRRFFVTIILTIMLAITIAFDFGTTNSWAATLPTQPQTQIASMNRAKAVTKNIEGKAQEAIGNMTGDPKDQMMGKAKQVESQARNAAEDIKDQMKLKGRAKAVTKNIEGKAQEAIGKATGNRQDQVAGKAKQVESQVRNAVEDVKDQVQDILN
>NZ_CP012375.1|WP_002752242.1|2271630_2271813_-|CsbD-family-protein
MSLKDRTEATAKNIEGKVQEAVGDLTGDPKAQAEGKEKQAEAKVRHTIEDVKDEVKKIID
>NZ_CP012375.1|WP_066029840.1|2271984_2272761_-|sterol-desaturase-family-protein
MIDHSFGFYGFAFFGIILARYFLVAGGTYLFFYSPLSQSFVNHNLRHWSPSWRSIQQDITLSVFSAGVFALAAAFIMTGYSWGITRLYSHPQQYGLCYLGVSYGAVLVLQDAYFYFTHRLFHHPSLFRWLHQGHHRSRYPTPWTSFAFDPLEAIVQSLFLVGIVFVLPLHFITLIAALTTMTIWAVLNHLGIDRLPSSFPHHWLGRWFIGPAHHSIHHRKYTVHYGLYFTFWDKLLGTQDPDYEQKFDERLTGKVDGV
>NZ_CP012375.1|WP_066029841.1|2272762_2275072_-|NACHT-domain-containing-NTPase
MVKRSLQASPSGIKQAKRAFALTGWTQENLAGEVNLKTRQPIWRFFTGKPVDRQVFLEICSILDLDWREIALAPPAEFPEPGELAKTNIDALVQEVRAQRLDTIQNQCGILQLLDISHPVNIDDIYVDVNILAEIASQQWVEIADWQNLGPAEFDRVGLGEVEQKQIPGMQAVETYSKLRVLGRPGVGKTTFLQHLAIQCNQGEFAANQVPIFILLREFAEESRPSGEFSLFNYIRQALLTSGISNPSVLETLLQAGRVLLLLDGMDEVLNQDITAVLREIRQFSEKYHRNRFVVTCRTAAQKLQIRGFTDVEIAPFTQAQISTFAQKWFVALSKTTAQAGQEQSAQFMEKLDLPENWQFRQLVVTPLFLHLACWVFQGQGKFPSKRAEFYKQGLDLLLGKWDEARGVERDQVYRGFLLPQKLRLLSQLAAVTFEQGQYFFEQRTIEQYIGDYLRNLPGATLEAEELQLESEAMLKAIEAQHGILTERARGIFSFSYLAFQEYFTARKIVASHNLQALEQALGGLVSHITDSHWREVFLLTAAMLRSADALVLLMKQQIDALVAQDSYLQEFLSWASQKSQQLPDETKVATARAFYLALAQSPHTADRFALASTLDQGMLLDAALENLLVEFAIDHSQDFAYVNACSEALNNILVMVLDAGFYKSLQQLRDQLPPPSQNLERLQHWWQKNYSAWVEQLRVAIANYRNIHHPWQFTTEQQQLLQRYYEANQLLIDCLNSNCEITAAIRQDIEATLLLPQKDLEDREWQGD
>NZ_CP012375.1|WP_066029842.1|2275095_2276670_-|B12-binding-domain-containing-radical-SAM-protein
MKALLLYPEFPQSFWSYDRFMEIAGLKATIPPLGIITVAALLPQNWEIRFYDRNVNPETEADWEWCELVILSAMLVQKPDFQALIQKAVQLGKKVAVGGPYPTSVPQDALDSGANYLILDEGELTVPLFLEAIAQGQSRGIFRSGDKPDVTLSPIPRFDLLQRDDYLMMAVQFSRGCPFNCEFCDIISLYGRKSRTKEPSQTLAELQTLYDLGWRGSLFIVDDNFIGNQRNVKRFLRDLIPWMKQHDYPFTFITEASVNLAEDDELLSLMAEAGFYSVFLGIETPDQDSLQVTRKLQNTRNPLVEACRKINAAGLLIYAGFILGFDGERSGAGERIQAFVEETSIPQPMLGILQAPPNTALWNRLQQEQRLVEGDSIHPTGDQNSLMNFIPTRPIAEIAKEYVEGFWTLYEPSHYLRRCFQQCLGLGLQSKHKQTMQFPVGKGLRLITQLIWHQGIRRGDIRGQFWRQLWTIWQKKPQVLNLYLGLCAAGEHFWEYRALARERITQQLGYDPLEVSGRPNQNSF
>NZ_CP012375.1|WP_046662148.1|2278456_2279695_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MKLVQKHLIKFNHKNYSVIDKLGFLSKNLYNCAVYLNRQVFFSHQPFLTMTELHHALKMSPDYQALPAKVSQLVLKQVEKTFKSYQKAKEQYKKSPDKFTGEPKLPRYKDKEKGRNVLTYNYQAISKKALKQGLIKLSGTNLEFKTNLKEVLEVRIIPKLGAYCLEIVYEQPSSSSQEGERYAFIDLGLNNLAAVTSNIPEFQPTLVCGKALKSCNQKYNKTLAKLKSELPSLQKTSKRIQGLTLKRNCKVDYYLHTASKYIIDKLLAHQINLLVIGHNQGWKQNINIGDRNNQSFVNIPHSRLIEQLTYKANLVGIEVKTTNESYTSKCSFLDLESIQKQKSYLGKRIKRGLFRSSSGYFYGADINGSLNIGRKVVGEAAFSGNPIERFVVNPVRVKAYKANSRCNICVQN
>NZ_CP012375.1|WP_046663713.1|2279666_2280260_-|IS607-family-transposase
MKLSDYAKKKGISYDTAWRMWNRGQLQGERLPTGTIIIFEDDRSCGENKVAIYARVSSSENQSNLETQAKRLEAYCIAKGYQIVRVVKEVGSGVNDHRKLLLKLLEQTDYNLIVVEHKDRLSRVGFNYLKVLLNQTNRDIEVVNLAEERKDDLMEDFVSIITSFCARLYSLRRRNRKTECLIKCLEENDEISSKTSN

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Crispr_ID: NZ_CP012375_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_13

2455384-2455498

Orphan

Consensus_repeat	Method
GGGAGAGGGAGTTTGAGCATTTGTACTAAAATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_13

>merge|NZ_CP012375|13|2455384-2455498|CRISPRCasFinder
GGGAGAGGGAGTTTGAGCATTTGTACTAAAATTCCCAATAGCCAGTTTAAAGACAGTACAGCTTGAGATGAATTATGAAGTGGGGAGAGGGAGTTTGAGCATTTGTACTAAAATT

>NZ_CP012375|13|13|2455384-2455498|CRISPRCasFinder
GGGAGAGGGAGTTTGAGCATTTGTACTAAAATT	CCCAATAGCCAGTTTAAAGACAGTACAGCTTGAGATGAATTATGAAGTG
GGGAGAGGGAGTTTGAGCATTTGTACTAAAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046662276.1\|2454318_2455344_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP012375.1\|WP_046662269.1\|2437906_2439310_-\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_CP012375.1\|WP_046662284.1\|2461560_2462454_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP012375.1\|WP_046662283.1\|2461016_2461373_-\|DUF1823-family-protein	unknown	unknown	gnl\|CDD\|370156
NZ_CP012375.1\|WP_046662280.1\|2458982_2459234_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029870.1\|2459237_2459801_-\|GUN4-domain-containing-protein	unknown	unknown	gnl\|CDD\|319862
NZ_CP012375.1\|WP_066029869.1\|2455644_2456562_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP012375.1\|WP_046663736.1\|2446373_2446598_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|224069
NZ_CP012375.1\|WP_046662285.1\|2462851_2463565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662279.1\|2457827_2458427_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239313
NZ_CP012375.1\|WP_046662274.1\|2446807_2447545_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP012375.1\|WP_046662278.1\|2456826_2457621_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP012375.1\|WP_046662273.1\|2444592_2446278_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_CP012375.1\|WP_046662286.1\|2463542_2464163_+\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP012375.1\|WP_046662271.1\|2442925_2443162_+\|ferredoxin--nitrite-reductase	unknown	unknown	gnl\|CDD\|367263
NZ_CP012375.1\|WP_046662272.1\|2443178_2444396_-\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_CP012375.1\|WP_046662270.1\|2439457_2442703_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP012375.1\|WP_002791490.1\|2437322_2437499_+\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|224739
NZ_CP012375.1\|WP_046662268.1\|2437538_2437730_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662282.1\|2459854_2460985_-\|CO2-hydration-protein	unknown	unknown	gnl\|CDD\|370890

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046662276.1\|2454318_2455344_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.13642e-108
NZ_CP012375.1\|WP_046662269.1\|2437906_2439310_-\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	1.52336e-139
NZ_CP012375.1\|WP_046662284.1\|2461560_2462454_+\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.89319e-11
NZ_CP012375.1\|WP_046662283.1\|2461016_2461373_-\|DUF1823-family-protein	gnl\|CDD\|370156	pfam08853, DUF1823, Domain of unknown function (DUF1823). This presumed domain is functionally uncharacterized.	1.02417e-74
NZ_CP012375.1\|WP_066029869.1\|2455644_2456562_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	2.16824e-71
NZ_CP012375.1\|WP_046663736.1\|2446373_2446598_+\|ferredoxin-family-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	5.21122e-09
NZ_CP012375.1\|WP_046662279.1\|2457827_2458427_+\|peroxiredoxin	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	6.62113e-112
NZ_CP012375.1\|WP_046662274.1\|2446807_2447545_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	2.87538e-117
NZ_CP012375.1\|WP_046662278.1\|2456826_2457621_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	1.01769e-131
NZ_CP012375.1\|WP_046662273.1\|2444592_2446278_+\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	8.01863e-29
NZ_CP012375.1\|WP_046662286.1\|2463542_2464163_+\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	4.95952e-11
NZ_CP012375.1\|WP_046662271.1\|2442925_2443162_+\|ferredoxin--nitrite-reductase	gnl\|CDD\|367263	pfam02941, FeThRed_A, Ferredoxin thioredoxin reductase variable alpha chain.	1.07453e-35
NZ_CP012375.1\|WP_046662272.1\|2443178_2444396_-\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP012375.1\|WP_046662270.1\|2439457_2442703_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP012375.1\|WP_002791490.1\|2437322_2437499_+\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|224739	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion].	2.43573e-17
NZ_CP012375.1\|WP_066029870.1\|2459237_2459801_-\|GUN4-domain-containing-protein	gnl\|CDD\|319862	cd16383, GUN4, porphyrin-binding protein domain GUN4. GUN4 is a porphyrin-binding protein involved in chlorophyll biosynthesis regulation and intracellular signaling, found in aerobic photosynthetic organisms. It has been implicated in retrograde signalling between the chloroplast and nucleus. GUN4 can bind protoporphyrin IX (PIX) and magnesium protoporphyrin IX (MgPIX), substrate and product of the Mg-chelatase, as well as heme and cobalt protoporphyrin IX (CoPIX). It may play a role in protecting plants from reactive oxygen species (ROS)-mediated damage.	1.5247e-50
NZ_CP012375.1\|WP_046662282.1\|2459854_2460985_-\|CO2-hydration-protein	gnl\|CDD\|370890	pfam10216, ChpXY, CO2 hydration protein (ChpXY). This small family of proteins includes paralogues ChpX and ChpY in Synechococcus sp. PCC7942 and other cyanobacteria, associated with distinct NAD(P)H dehydrogenase complexes. These proteins collectively enable light-dependent CO2 hydration and CO2 uptake; loss of both blocks growth at low CO2 concentrations.	0

>NZ_CP012375.1|WP_046662276.1|2454318_2455344_+|ABC-transporter-permease
MSRRAALQSYLLVRLLLAPLMLWTIVTVVFLLMRVAPGDPTDAILGNRAPESAKNALREQLGLNKPLFFQYLDYIFHLMRLNLGDSLTSKGVTVWEIIAKHFPATVELTFYGMLIAVIVGVGLGIITASRPNTPLDAGGRLFGLITYSLPIFWVGMLLQLIFAVQLRWFPLGTRFPLSETPPQTITGLYTLDSLMTLQLDKLPTALYYLALPSFTLGILLSGIFERMVRVNLKQTLQADYVDAAKARGIPEKTIMIAHALKNALIPVITVLGLTFAALLGGAVLTEVTFSWPGLGNQLYRAISLRDYPTVQGLMAFFATIVVFASILIDLINAYIDPRIRY
>NZ_CP012375.1|WP_046662274.1|2446807_2447545_+|ABC-transporter-ATP-binding-protein
MDYLLEVEQVYAGYVQDLYILQGVNFRIAPGELVTVIGPNGAGKSTLAKTIFGLLKPSAGTITFKGKNIAGWKSNQIVPLGMGYVPQIANVFPSLSIEENLEMGAFTSKKAIKPLKERIYAMFPRLDERRRQKAGTLSGGERQMLAMGRALMLQPDLLILDEPSAALSPILVTSVFEQIKAINQTGTAIILVEQNAKKALMMSDRGYVLESGQDRFQGSGQDLLNNPKVGELYLGAAHHGAHGKD
>NZ_CP012375.1|WP_046663736.1|2446373_2446598_+|ferredoxin-family-protein
MPHSIVTGTCEGVADCVSACPVACIHPGPGKNVKGTDWYWIDFATCIDCGICLQVCPVEGAIVPEERPDLQKTP
>NZ_CP012375.1|WP_046662273.1|2444592_2446278_+|glycosyltransferase
MNPSYNNSIPVQRIKVSVIVSTYKSAQFIRGCLEDLVTQTLYEKGEVEIIIIDSASPENEGEIIQEFQENYPNIIYQRTRERETLYQAWNRAIKLARGSYLTNGNTDDRRCFNALEIMANYLDNNREISLVYADQLITTIKNDTFATTPALKHWNWPNYSYQQMRQGCCVGSQPMWRKMLHDKYGYFQENFRCAGDYEFWLRIGSQGEKMALIPEILGLYYLNLQGLEHGSNGQALQEHYQVCKIYEIPHPDIKDIEIKPNPVKMEDLGIILQEEEREKLQTIQAISQRRWPIIVIDGVIFQINQGKLAGVWSSILEYWRQLEFSQYIVILDRNNSAPRWEEFKYWPAESYDYNCTGKDAIKIQAICDRLQANLFISTFYTSPLTTPSLLFLASESPEENGKLPVDLEKHYAILSASIIIAFSSDIAQDLRKLYPQISPEQIDIIEFFEVNQKIAEEITNFLWYALSETKESSQNQVWLELRKLQEAQQIMYLKQQQDYRTMQGMEISLKELENNHNYLQKNNRELREEINYLSSRKGIVKTLAKTSILLLAKIKKKLPIF
>NZ_CP012375.1|WP_046662272.1|2443178_2444396_-|tyrosine--tRNA-ligase
MTVSSSLDWLTRGTSDLFPHQPDSQEPRENLTQLLQTTDRPLRIKLGIDPTGSDIHLGHSIPFRKLRAFQDAGHIAVVIIGDFTARIGDPTGKSEVRKQLTSEEVRANAENYLAQLRPILDFNTPNRLEIRYNSEWLGKLDLSQILELLSTMTVGQMLAKEGFSERYDKENPIFLHEFLYPLMQGYDSVAVEADVELGGTDQKFNIAVGRDLQKYFGKKPQFGLLLPILIGTDGSQKMSKSLNNYVGLRESSLSMYSKLEKTPDALLKDYYELLTNLPLDAMPSNPREAQKQLAIEVVAQFHGEEEALKAQKTAQEIVLQGNTAAAASVPEFSLAAVTFPLKLFYLLSATGLCKSSGEGRRQIQGGAVRIDSEKITDVDKSFETAEALTGKVLQVGKNKFIRFVA
>NZ_CP012375.1|WP_046662271.1|2442925_2443162_+|ferredoxin--nitrite-reductase
MKVGDRVRIIDSVVVYHHPEHKSEPFDVKGLEGQVKAFVTEWRGRPVSANLPVLVEFSKKFKAHFRDFELEIVEKAAE
>NZ_CP012375.1|WP_046662270.1|2439457_2442703_-|carbamoyl-phosphate-synthase-large-subunit
MPRRDDLQKILILGAGPIVIGQACEFDYSGTQACKALREEGYEVILVNSNPASIMTDPEMADRTYIEPILPEIVEKIIAKERPDAILPTMGGQTALNTAVALAKSGVLEKYNVELIGAKLPAIEKAEDRELFKQAMEKIGVPVCPSGIANNLEEAKAIAHQIGSYPLIIRPAFTLGGTGGGIAYNQEEFEPMAQYGLDCSPTSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENFDAMGVHTGDSITVAPAQTLTDKEYQRLRDYSKAIIREIGVETGGSNIQFSVNPTNGDVIVIEMNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEIPNDITKKTPASFEPTIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDKVETLPPLSEVRASLRTPNPERVYSIYHAFKLGMNGEEIHELTGIDPWFLDKLADLMETEKFLKRTPLKSLRQEDLFAIKQQGFSDRQIAFATNSSEDEVRSYRKGLGIIPVYKMVDTCAAEFEALTPYYYSTYERVESEVLPSDKRKVMILGGGPNRIGQGIEFDYCCCHAAFSLSNAGFETIMVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEAEQPEGLIIQFGGQTPLKLAVPLQKYLESPNCPVNTKIWGTSPDSIDAAEDRERFEKILRELDIRQPPNGIARSFQESQAVAKRIGYPVVVRPSYVLGGRAMEIVYSDSELERYMKYAVQIEPDHPILIDKFLENAIEVDVDALSDTTGTVVIGGLMEHIEQAGVHSGDSACSIPHTSLSAPVLTTIRQWTVELAKALKVIGLMNIQYAVQGETVYILEANPRASRTVPYVSKATGVPLAKVASLVMSGKTLAELGIISEAIPRHIAVKEAVLPFQKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAEMAAGVILATSGTVFVSMNDRDKTPMVPVVKDLQSLGFRVVATSGTREVLLENGCENIDLVLKIHEGRPHVIDWIKNDWIQFIVNTPSGEESQNDGRQIRRTALDYKLPIITTIAGAKATVAALKSLQSQPLEVKALQDYLA
>NZ_CP012375.1|WP_046662269.1|2437906_2439310_-|TldD/PmbA-family-protein
MTDTLNDYKNLISELINRYKNRVDFLTIRLEEARGTNILLRSERVETLSEGIAIGGQVRACYKGGWGFASFNQLSSLQERLEDAIAAARLIGEEETLIAPVEPVIISCELPLTGTDPRLVPLADKKALCDRYNNLLRQHHASIATTSVRYSDSSQHILLGTSDGTLIEQKWSDLEMRFSATARDGDSVQTGRETTGSRKAFEDLVNLEEQVQGAAKRALQALVLPPVKGDTYTVVIDPILTGLFVHEAFGHLSEADMLYENPDLLEVMSMGKRFGPDNLQIFDGASPEGHRGSYFYDDEGTPATTTQLIKDGVLVGRLHSRETAGKLGEKPTGNARCLNYHYPPIVRMTNTWIERGTTPVKELFSGIKTGVYAQNWQGGMTNGEMFTFSAGEAWMIRDGEIAEPVKDVTLSGNVFKTLANIEAIGDDFYWDESGGCGKGGQSGLPVGCGGPSLRIRDVVVGGEADIQ
>NZ_CP012375.1|WP_046662268.1|2437538_2437730_+|hypothetical-protein
MGFLRGNFLLKLGVTFGFITQSKLLGGSTPQTPRWGRGAAPKPPRIRLTVRCLHAIVHIFVLI
>NZ_CP012375.1|WP_002791490.1|2437322_2437499_+|twin-arginine-translocase-TatA/TatE-family-subunit
MFGLGWPEIVIIAVVIVLIFGPKKIPEFGAALGKTLRGFKEEINQDEQEIEDSDEKMR
>NZ_CP012375.1|WP_066029869.1|2455644_2456562_-|glycosyltransferase-family-2-protein
MFSIYILTHNEEIDIAACVESALLSDDVIVVDSYSSDRTVEIASRYPVRVIQHQFESHGKQRTWMLENIETKYDWVYILEADERMTPQLYAECLRATQQTEFTGFYVAERVMFMGTWIRRSTQYPRYQMRLFRKDQVWFSDYGHTEREECRGKTSFLQETYPHYTCSKGLSRWIEKHNRYSSDEAAETLHQLANGDVSWKNLFFGETEVDRRRALKDLSLRLPFRPLLRWFYMYFILAGILDGKAGFAWCTLQAFYEYLILLKVAEMKQGLPTPPEVRNPFHPPQNGNNSNSHISDFVSLKGKVD
>NZ_CP012375.1|WP_046662278.1|2456826_2457621_+|tryptophan-synthase-subunit-alpha
MTAVSECFRSLRSQGNCALIPFITAGDPDLSTTAQALRILDRAGADLIELGVPYSDPLADGPVIQAAATRALNRGVKLEDVLEIVKNAQGEVKAPIILFTYYNPIYHRGIDVFLDQIKAAGVSGLVVPDLPLEEAASLLQPAAAKGIEVILLVAPTSPPERIQAIALQSQGFIYLVSVTGVTGMRNQVATRVEELLDSIRSVTDKPVGVGFGISDPTQALQVKNWGADAVIVGSAMVKRLADNSPGDGLKSLEEFCRSLKQAIA
>NZ_CP012375.1|WP_046662279.1|2457827_2458427_+|peroxiredoxin
MTAEGCLRVGQAAPDFTATAVFDQEFKTIKLSDYRGKYVVLFFYPLDFTFVCPTEITAFSDRVSEFASINTEILGVSVDSEFAHLAWIQTERKSGGVGDVAYPLVSDLKKEISTAYNVLDPDAGVSLRGLFIIDKEGVIQHATINNLSFGRSVDETLRTLKAIQYVQSHPDEVCPAGWKEGDATMVPDPVKSKVYFAAV
>NZ_CP012375.1|WP_046662280.1|2458982_2459234_-|hypothetical-protein
MKGIIGYFRALLSPQFAPTGIKVAVVVGTILLTINHGYAIISGRMTSDRWMAASLTYLVPYLVNIHGQYSSYRRQQWPKKSQQ
>NZ_CP012375.1|WP_066029870.1|2459237_2459801_-|GUN4-domain-containing-protein
MSDINAQLQDILAQLQSLSERVALIEARQMLVPDIERYGKLQQFLAEGNFREADAETLRVILEAAGRTRDTLTPEDMMRFPVNVIRVLDRLWKNYSGDHFGFSNQVKLYFAAGGDINTLRTQDAETIRKFGELVGWRDKEQWRIDDYDHWDFSLAAPEGCFPALWWKSPYGLKMVTFCFTRLIECDL
>NZ_CP012375.1|WP_046662282.1|2459854_2460985_-|CO2-hydration-protein
MVTIPVKSSSHPLASYIDRLTAGEALLKDTPQNLIEVVGILKSYGVVLDAYSKNLIYIAENQFLVFFPFFKYFNGQVSWQKLLQHWWHNRINFEYAEYCMKAMFWHGGGGLDSYVDGAAFREVTAKVIQAKFRNNPLVLILNKAFPEFLPEQMRMMAYYSGLGQFWRIMADTFLSLSDLYDARKITNIPEVVAHIKKNLVDNASQAIVYQVKIKGQTYDLIPKSAGLTFLADTAIPYVEAVFFRGTPFPGTISYNAQAYQIPYDQGMFAYGALYADPLPIGGAGIPPTLLMQDMRHFLPDYLHDIYKKSFRQEEDLLVQICETFQKSMFCVTTAAIQGLAPYPLTTTDLKEQKANRIYLEAWMNRFVKSRLEAVNQ
>NZ_CP012375.1|WP_046662283.1|2461016_2461373_-|DUF1823-family-protein
MELPELNIEIIWAIINDEIDDETVNKLVWQSLGYRYDESQGKWDNSQVEEDWRCEYPEPPDFIANRPPTVKLTRSILPENKQLLKDKLGFTGYKIGEFNPRMTRRATAANWLCFYALK
>NZ_CP012375.1|WP_046662284.1|2461560_2462454_+|DMT-family-transporter
MPPSNAKIIFILIIGVVSVSASAIFIRLAIEAVGNATIAFSLFLATSRLILASVVLIPNWLTLSRQKVPVQAYYYAVGAGFCLALHFATWITSLSYTSIAASTTLVTTNPLWVSLLGWWWFREKPSKLTFIGIFVALTGGLLIVLADRDLSSSYPNPLLGNSLALIGAILVSGYILLGREAQRKGLNIKNYITVAYTTAGLALLPAIFLFGQGYESYPLSVYVYVLMMAIFPQLIGHTSFNWALRWVAPTIVTMVILLEPIAASLLGMFIFGEIPAQEVIYGGLILLIGVGIAILGG
>NZ_CP012375.1|WP_046662285.1|2462851_2463565_+|hypothetical-protein
MLEVMIAILTITAFSTGTLQLMAFTALYKVRAERQAKANFWIQEDFEDVKFLASTLDVNDNDDSVNADNHDPDRFSEIYPNVCSDINQGYARELRRRLPSQDPNFRDPEPPPDPDDYAIPASDFDLPQLPLSRESRPLPPLAETLVATREIVGKNYSLYRTFPDDFEEDNHPDPSIISTAQIDNPHRLRIEYKVKLADGEIANDYQTQERDERNEEEGKFLAKSSVEVIPNASFKCP
>NZ_CP012375.1|WP_046662286.1|2463542_2464163_+|type-II-secretion-system-protein
MRRLNVHKNQGFTLLEILVALAITGILAALTGPNLSAWLNSNKVKEATDSIQLALEDAQRQAIRLGRNCTINFTGGTGNNPTVYSQITASEPGCLVATNTNAGSLSLPQEIFMVVRNFPTLGSSPGVQFSFRGHVPGLTFTPPQNQAIIVLYPAADATADPYPNQEKKCLVIASMLGIVKQGTYTGTSLTNLDARQCEIRLDGTQP

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Crispr_ID: NZ_CP012375_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_14

2769744-2769982

TypeIII

Consensus_repeat	Method
AGAAATTAATTGACTGGAAACA	PILER-CR

3 spacers

cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,cas14j

The CRISPR arrays of NZ_CP012375_14

>merge|NZ_CP012375|14|2769744-2769982|PILER-CR
AGAAATTAATTGACTGGAAACAAAAGGGTTCTCCCTCTTTCAAGTTTTCAACTGCCCGACTCTCTACTCAGTGGAGAAATTAATTGACTGGAAACAAAAGGGTTCTCCCTCTTTCAAGTTTTCAACTGCCTGACTCTCTACTCGCGCTTAGAAATTAATTGACTGGAAACATTTGTAGGGTTAATTCATGAATTAACCCTACTCTCCACTCGCGCTTAGAAATTAATTGACTGGAAACC

>NZ_CP012375|14|2|2769744-2769982|PILER-CR
AGAAATTAATTGACTGGAAACA	AAAGGGTTCTCCCTCTTTCAAGTTTTCAACTGCCCGACTCTCTACTCAGTGG
AGAAATTAATTGACTGGAAACA	AAAGGGTTCTCCCTCTTTCAAGTTTTCAACTGCCTGACTCTCTACTCGCGCTT
AGAAATTAATTGACTGGAAACA	TTTGTAGGGTTAATTCATGAATTAACCCTACTCTCCACTCGCGCTT
AGAAATTAATTGACTGGAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046662499.1\|2776944_2777289_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662484.1\|2757553_2758015_-\|biphenyl-2,3-dioxygenase	unknown	unknown	gnl\|CDD\|259872
NZ_CP012375.1\|WP_066029912.1\|2771662_2772922_+\|transposase	cas14j	-	gnl\|CDD\|223747
NZ_CP012375.1\|WP_046662500.1\|2777662_2778496_+\|photosystem-II-manganese-stabilizing-polypeptide	unknown	unknown	gnl\|CDD\|366770
NZ_CP012375.1\|WP_046662496.1\|2773784_2774210_-\|lysozyme-inhibitor-LprI-family-protein	unknown	unknown	gnl\|CDD\|226278
NZ_CP012375.1\|WP_046662493.1\|2770016_2770634_-\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|131644
NZ_CP012375.1\|WP_066029910.1\|2761060_2763004_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187792
NZ_CP012375.1\|WP_066029911.1\|2766103_2769118_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_CP012375.1\|WP_002757875.1\|2758177_2758486_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029908.1\|2758970_2759813_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP012375.1\|WP_071890111.1\|2771180_2771612_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP012375.1\|WP_046662489.1\|2763067_2763457_-\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
NZ_CP012375.1\|WP_046662491.1\|2765003_2766131_-\|CRISPR-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP012375.1\|WP_066029909.1\|2760045_2760498_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662487.1\|2760690_2760963_+\|LapA-family-protein	unknown	unknown	gnl\|CDD\|377648
NZ_CP012375.1\|WP_046662497.1\|2774380_2775400_+\|methyltransferase	unknown	unknown	gnl\|CDD\|366359
NZ_CP012375.1\|WP_066029913.1\|2775442_2776876_-\|phosphoglucomutase/phosphomannomutase-family-protein	unknown	unknown	gnl\|CDD\|100093
NZ_CP012375.1\|WP_149039034.1\|2773258_2773612_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662490.1\|2763789_2764569_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_CP012375.1\|WP_066029914.1\|2778853_2779987_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|227091

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046662484.1\|2757553_2758015_-\|biphenyl-2,3-dioxygenase	gnl\|CDD\|259872	cd04210, Cupredoxin_like_1, Uncharacterized Cupredoxin-like subfamily. Cupredoxins contain type I copper centers and are involved in inter-molecular electron transfer reactions. Cupredoxins are blue copper proteins because they have an intense blue color due to the presence of a mononuclear type 1 (T1) copper site. Structurally, the cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Some of these proteins have lost the ability to bind copper. Majority of family members contain multiple cupredoxin domain repeats; ceruloplasmin and coagulation factors V/VIII have six repeats; Laccase, ascorbate oxidase, and spore coat protein A, and multicopper oxidase CueO contain three repeats; and nitrite reductase has two repeats. Others are mono-domain cupredoxins, such as plastocyanin, pseudoazurin, plantacyanin, azurin, rusticyanin, stellacyanin, quinol oxidase and the periplasmic domain of cytochrome c oxidase subunit II.	2.0232e-66
NZ_CP012375.1\|WP_066029912.1\|2771662_2772922_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.41113e-30
NZ_CP012375.1\|WP_046662500.1\|2777662_2778496_+\|photosystem-II-manganese-stabilizing-polypeptide	gnl\|CDD\|366770	pfam01716, MSP, Manganese-stabilizing protein / photosystem II polypeptide. This family consists of the 33 KDa photosystem II polypeptide from the oxygen evolving complex (OEC) of plants and cyanobacteria. The protein is also known as the manganese-stabilizing protein as it is associated with the manganese complex of the OEC and may provide the ligands for the complex.	5.67742e-155
NZ_CP012375.1\|WP_046662493.1\|2770016_2770634_-\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|131644	TIGR02595, conserved_hypothetical_protein, PEP-CTERM protein-sorting domain. This model describes a 25-residue domain that includes a near-invariant Pro-Glu-Pro (PEP) motif, a thirteen residue strongly hydrophobic sequence likely to span the membrane, and a five-residue strongly basic motif that often contains four Arg residues. In nearly every case, this motif is found within nine residues, and usually within five residues, of the extreme C-terminus of the protein. Proteins with this motif typically have signal sequences at the N-terminus. This region appears many times per genome or not at all, and co-occurs in genomes with a proposed protein-sorting integral membrane protein we designate exosortase (see TIGR02602). PEP-CTERM proteins frequently are poorly conserved, Ser/Thr-rich proteins and may become extensively modified proteinaceous constituents of extracellular material in bacterial biofilms. [Cell envelope, Surface structures].	0.00477831
NZ_CP012375.1\|WP_066029910.1\|2761060_2763004_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	4.59827e-20
NZ_CP012375.1\|WP_066029911.1\|2766103_2769118_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	1.44272e-43
NZ_CP012375.1\|WP_066029908.1\|2758970_2759813_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.33692e-32
NZ_CP012375.1\|WP_046662487.1\|2760690_2760963_+\|LapA-family-protein	gnl\|CDD\|377648	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain. This family includes a domain found in lipopolysaccharide assembly protein A (LapA). LapA functions along with LapB in the assembly of lipopolysaccharide (LPS). Domains in this family are also found in some uncharacterized bacterial proteins.	0.000895653
NZ_CP012375.1\|WP_046662491.1\|2765003_2766131_-\|CRISPR-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	7.39137e-63
NZ_CP012375.1\|WP_071890111.1\|2771180_2771612_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	3.15708e-45
NZ_CP012375.1\|WP_046662497.1\|2774380_2775400_+\|methyltransferase	gnl\|CDD\|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	1.30406e-51
NZ_CP012375.1\|WP_066029913.1\|2775442_2776876_-\|phosphoglucomutase/phosphomannomutase-family-protein	gnl\|CDD\|100093	cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.	0
NZ_CP012375.1\|WP_046662496.1\|2773784_2774210_-\|lysozyme-inhibitor-LprI-family-protein	gnl\|CDD\|226278	COG3755, COG3755, Uncharacterized protein conserved in bacteria [Function unknown].	1.72055e-30
NZ_CP012375.1\|WP_046662490.1\|2763789_2764569_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	5.34183e-32
NZ_CP012375.1\|WP_066029914.1\|2778853_2779987_-\|restriction-endonuclease	gnl\|CDD\|227091	COG4748, COG4748, Uncharacterized conserved protein [Function unknown].	5.52869e-119

>NZ_CP012375.1|WP_066029911.1|2766103_2769118_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MALGYWQAKIWGLLQAPVLKALHSNSGRSGDSFWRDLEVMKLWGKHNSEESTKKILKRIKLADYITSASDRAAISSLTQFVNYDQQTGLELRHLLSGEPLALKLANTTHKKIASNRTDYLKKQETRLFNQIPARLRTGISENEAKELFWWLWRCLPQAATKLLDDENLLLMPAETRIPDGSIWSHASVTAAIAGSLAGYDLTPEDVVNKWPTGKQLSHPYLVSFSFSPVQELIKASRKMGDFWAGSWILHYLSAKVCWQLAQQYGPDSLIYPSLYAQPLIDQWLLEKYSDFSSWIDPPGDQQLLTAGFPNVIILILPKDKVAAAMQTAKSRLLKEWKEISRQVFEKLQLKENSRTWDSWLNAQWQTYYVGVPIGREDQTLTSGEIYQENENIAENQAEDPEKAQSWRDKQNELYNLYDKKALFLEKEREFLQKAGELAHQKWKRPPFSSNVGSWWSSAFEQNLSALAAVKNARDWQIPTAFGPRSTISGLGPVVHPDGNNDWISEKASKEYWQRNTGLFNGIEQLNATETVKRGLHLILPKLLKNSDQKRLDAAYPDLTVGVAGYLKTGGDLDYFHRVCRTISRRLREDGKKIPTALTQPWGIPYIDNHIEPEYKRYHPRFLNAGWLVEELEIPDEEMANYRHQLSQLIDQNYPHNNPADWYVIAAGDGDGMGEWLKGQKMKPYRDYIPKSLHQYADHPPTETDTLEKEVQKAFGDFVTLDKRIGPSTHHALSRALLDFSNQLVPYLTEQRYAGRLIYGGGDDVLAYTNLWEWDKWLWDIRQCFKGEKDPHGEFNNAGDYWQWKGEKPAENLAKRPLFTMGKRATISFGMVIAHHSVPLAIALENLWEAEKKAKEHTYKGFDGKKVKKDAVQVRVLYGNGNGLESTAKFDVFPLWQKLLASNSDASLFEAVAGLWQQHPAPMIEAIEVWVKAFSSRQENLTTDNREFPEDLSNFLKHLWLTTENDANNLKEAVDSWMKLAAFMTRKREIKIGGSLLCIGTQSLP
>NZ_CP012375.1|WP_046662491.1|2765003_2766131_-|CRISPR-associated-protein-Cmr3
MYWYTITPLDVLLLRDAKPFSSKETAWAGSTFPPNSYTIAGALSSLLNRSKNSYFKITGPFLSFAGDTLYLPRPLGFANSDPLIPISWSDNLAISENHIFWDPLKPAPLAKANPRKNCQNRENEGQEENESKYRQYLPFEVILDYLKTGAIDPSQWLVKHEGEDKPWREEIRYHNAMQPGSKRLKDADGYFVEKAIRMLPGWSIAIGIDVNIPTPTTLRLGGEGHRVMLEKCDDLGQQWEQLKQQSRKNFQAEGKAIAYLATPGIFERRHDNNQAICRSWPWEWKLAHTVNSNQKAGHLVSVATDRAIPISCRIQSKENTSIPAPQVFAAPPGSQYYLNQPDRLFQDQPDSPEYHQRWRKLGYSELLWINYKENS
>NZ_CP012375.1|WP_046662490.1|2763789_2764569_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNLIHFYLLSPLHTGGTTQEGNLVGIARESHTTLPYIPSSTIRGKIRSLATEETLKFKLFGNEIDQGAENLVQGDIWIGDGSILWLPVSSLSHGVVWITSPLLLRRWTRLTNTRLTIPPEYSCSFTKPNTNIYLKDAILKDNDLKDWSTWTSFIPQNSVSSGINKVLVLPDQHCTTLIQMSLWRQVKIKLDEHKSVDGGFRYEEAIPPDTLMYFPWGITSQANGTGQQSQADFKRLLADNEIIQIGGQESLGRGFVQQL
>NZ_CP012375.1|WP_046662489.1|2763067_2763457_-|hypothetical-protein
MTFDPRTISKPVFNALQELYLNTGDDSRRKEQKKQALELYTYLSTWGMMRLKAEETALNQEGKKEVVAKYFQCLEELSQRNHLSNSQGLTTLKDLSTDDYLGLTGLGLEIAQEFSFWANAIYSDVESGD
>NZ_CP012375.1|WP_066029910.1|2761060_2763004_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MSHSPLPRPNRPQKPILKNPAIQQQNNHQPPKKPPSGGGGNNNPPQPSPWLNAEKEPQPDQSASFVEYLRWMRAADHDYKDATKVQILQTAQENANYTQRLDQLNQRTQLLAKDGITFQVKSTWRIRVSGHRGPESILLPAFDALGMPYIPSSTLRGVARNQAIREIMAENNLEWKEAVEKTTLYFGDINAKEKKNKTGKVIFFDAYPLPTKNGGLEVDMANNIWSWKDDSTQYSPNPNPFLSLKEPTFLIGLRLASNCGDEKILEQVKQWLKKGLQLGIGSQVNSGYGQLKQIDDTSHSDNNKNSHDSGFYRLDFELEGQLIHGYQRFTQWQWNERRNEWQMRSAPVAEVRPTAFKSMLRYWFRVLASGVLPINEVQNIESELFGGINPKKYGYLQVNILDGKVSQKEPRTNAQGKNDPCGEQQGTLVLSLSSETPKDKEEAVKKLAKHLTWFLADMGGIGQGARRPSYSRKSREHAPWFRGSTLYIDSEEDFWAIPNDLQGFKQQFQQRLRDFYGILDNISETNINTNNLRTVDQVSQNQWIDAADSNCQIFVCAGNEQRGKPHALAILHSDTLKITSKNGQREYDGNLCGKVSGGAKPSPVWIADLGDYQIVTVFGATAAPRKNFVSELKAKTISENFAQIFPL
>NZ_CP012375.1|WP_046662487.1|2760690_2760963_+|LapA-family-protein
MNTITNFLASAIVGGWIMTMAVFAIQNIQPVSLKFLQFESIKLPIGILLAFSLAMGFFIAAVIPAFLRKSKKSPRSRFSPPESGLDEFDF
>NZ_CP012375.1|WP_066029909.1|2760045_2760498_+|hypothetical-protein
MKCDRFLTFSLVLSLGLVFPPSLPAQTPPATTFHPGPWQPVARVNMSRPVEIKIINQTDIDLNYDLSANIDSSPQLLSPGTETTLRGLVIPAYILINRANAAADRYSSSLIYAVEVNQDNLVTITVTKVPGSAPGYTTFNINQQGAIYIY
>NZ_CP012375.1|WP_066029908.1|2758970_2759813_-|alpha/beta-hydrolase
MPTIDISGVSHSYELFSPRADKPVLVFIHGWLLSRHYWQPLVDILSPDYPCLVYDLRGFGDSQKITSNSPPSSYNLESYSQDVITLLNRLNLDAAWLVGHSLGGSVALWAADICPERIKGVICMNAGGGIYLKEEFERFREAGRQILQRRPPWLPRVPLIDVLFSRMMVKQTLSKKWGKQRVIDFVRADYQAALGSLLETTTISEVHLLPQIVSRLPQPVYFLAGKEDTIMEVKYVNHLASFHPLFETGGNVIELSGCGHFAMLEQTAAVAEKMMAILSR
>NZ_CP012375.1|WP_002757875.1|2758177_2758486_-|hypothetical-protein
MLHRKIYQFCMDGQEVCIFLRDQQRWIDNARIVDLESDLVTIRYETEEEDEISSWEEMVRLESIGAVSRKLASVSRTNPDINVSEDCPEAEQLYPHSPDSLD
>NZ_CP012375.1|WP_046662484.1|2757553_2758015_-|biphenyl-2,3-dioxygenase
MNSSPYFHAKDIYQKFVAVVIVLISCWLVTFPAFAGSAPLEVKISLGSGQGELKFFPSQLDFIAGQKYKLILDNPSPTKHYFTAKDFADASWTQKVEAGKVEIKGAIHELELKPNAQAEWVIVPLKTGKYKLICTIPGHAEAGMVGEIAINNP
>NZ_CP012375.1|WP_046662493.1|2770016_2770634_-|PEP-CTERM-sorting-domain-containing-protein
MNILNIAKLATFGLGVTLVPLALTINNSAQAAVFTFNGGDNALSSITKTVDGITLTISNNQPRGSFFADGDGVAVLGGPSSPGQVTTSFNLTFSSAVQLTSYNIGFIEGLEGDESFTLSNGSSSSVETSPFSTGSRNFNNQFTVAAGQTVSFSVIFGTGDINDLIQWSELKVTPASNPTTTPEPSTILGLLAVGSLGALSRKLQG
>NZ_CP012375.1|WP_071890111.1|2771180_2771612_-|IS200/IS605-family-transposase
MSTDYNHRFCSVYKLTAHVVFVIKYRRKAINNEILVRLKEIFVSTLTKWESVLLDFNGESDHVHRIIDYKPDIALSKLIANLKTVSSRLIRKEFPDLAAKYFYNKPYFWTGAYFVASCGDITIEQLKKYVENQNSPKVETLPR
>NZ_CP012375.1|WP_066029912.1|2771662_2772922_+|transposase
MITLTYQYKLKVNRQQEREIIHILDVCKSVYNYALSERKDWLNSRKCLADHCSLVSEYIIPADQPYPNYFVQAKNLTEAKKIYPILKTVNAQVLQQVLKTLDKAFNQMKSKSFGFPRFKKKMRSFVFPALSKNFLGDEYLNFPQLGKIRIRKSREYPSGFEPKQARIIQKASGFYVSVSFQSTELVPDMTEGKTCLGIDAGIESFIATSRGDLIKDPRFLLKVQSKLKLLQGRLKRKTKGSSNWLKLQEKIARLHEKVSNTRRDWHFKLSHYLCDLADNIFVEDINFVSWSRGIVRKQSLDSAIGSFINEILPFVIWKRGKYYLKVDKNGTSQDCPNCGAITGKKALSERVHRCDSCGHIEPRDTASAKVIENRGKNAVGLTVLENARGGDLTGIDRLNQVDLVKSLRTENPPLHRASG
>NZ_CP012375.1|WP_149039034.1|2773258_2773612_+|hypothetical-protein
MQLRAFFMGLTVAGLVIPSVLGSTSKVLAEDITFTLENKTRVNMTEFYASPSGVKSWENDILGDDVLGSGEQVEININDERTTCNYDFQAKFADGDVVEKYNINICELAGGSYEFYD
>NZ_CP012375.1|WP_046662496.1|2773784_2774210_-|lysozyme-inhibitor-LprI-family-protein
MGKFLLTVLSIASLFTVGMATRSIAGPTSGARDRQLAQRPNCNNPQTQSEMNICASIAYQNADRKLNQVYQQLLPKLSAAHKQKLISAQQAWIKFRDSSCEFERSAFEGGSMAPMVYGFCLADVTEQRTKDLQRYLEDSDR
>NZ_CP012375.1|WP_046662497.1|2774380_2775400_+|methyltransferase
MSLPELPLHLQLTQMVSGYWLSQAIYAAAKLSLAEHLSKGAKSCQELASLTETNPAALYRLMRALASVGIFQETESQQFILTPLAEHLSSDHPRSVKATAIMLGEAPHYQAWGNVLHSIKTGQPSFDDVFGMGVFEYFQTHPLDAEIFEQSMNSFSLSEEKAILAVYDFSEFQTLVDVGGGYGEMLGTILEQYPQLKGILFDEEYVISHCQPTLEKHGIVDRCQTVGGSFFESVPSGGDGYLLKHIIHDWDDRRAIAILKNCCQVLDSNGKVLVLEMVVPAGNNPSAAKMLDLNMLVMCPGGKERTAEEFEELLSQAGLKLNRIIPTQEDICIIECVKK
>NZ_CP012375.1|WP_066029913.1|2775442_2776876_-|phosphoglucomutase/phosphomannomutase-family-protein
MTTVNPIKFGTDGWRGIIAADFTFDRVALLAPLAARVLADNYGQITGSRTIIVGYDRRFMAEDFAQTAAESLQKAGFDVLLSQSYAPTPAFSWAARSENALGAIVLTASHNPAKYLGLKVKGYFGGSVSPEITQQIEALLSNPPQFNAAAGKLSTFEPWSGYCQGLRQKVNIAAIAEAIESGQLKVYSDVMHGAAATGLERLLGVGITELRGNRDPLFGGGSPEPLPRNLTEIIDKLAHSANLAPLRVGLVFDGDSDRVAAIDGRGNFLSTQNLIPILIEHLAGKKGMRGEIVKTVSGSDLIPKLASLYGLSVFETPIGYKYIADRMLTTPVLIGGEESGGVGYGSHIPERDALLSALYVLEAVVESGQDLSDLYAQLQDKTGFHSQYDRIDLPLANMEARDQLITALDQEPLREIAGKQVTDCNPIDGYKFRLEDGSWLLIRFSGTEPVLRLYCESSTLDRVHEILAWAKSWATYI
>NZ_CP012375.1|WP_046662499.1|2776944_2777289_-|hypothetical-protein
MNSALPGDNSQLDGQLHSLVTTVTAIAEEHQQDCNGLLMLLRTLENLHRQIREQMFEPSLPNTRKDLYGLLRDIEETGGWPYIERMKLQMLMEKLLASEVGALDPAAKTDDREK
>NZ_CP012375.1|WP_046662500.1|2777662_2778496_+|photosystem-II-manganese-stabilizing-polypeptide
MRFRALLVAFLALCLGVLTACSDAPSAVLNRNELTYDEILNTGLANKCPQISEFTRGTLPLEPGESYVVTDLCLEPQEYFVKGEPVNKREAATFIPGKLLTRDTTSLEQMTASLTVGEDGVLTLKEEDGIDFQPITVQLPGGERVPLFFTIKGFTGKTEAGFSSINSSTDFVGDFKVPSYRGAGFLDPKGRGVVTGYDNAVALPASADSQDFQRANVKATELGKGTMSLQVTKVDASTGEFAGVFESEQPSDTDLGAKDAEEVKIRGIFYGRLEARA
>NZ_CP012375.1|WP_066029914.1|2778853_2779987_-|restriction-endonuclease
MEIDKLKEIAQKVETSRSQIQNEQATKTAFIMPFLQAWGYDVFNPMEVHPEYSADLTGLKGEKVDYAICLDNQPIILMECKSCHQNLEHPKHSSQLHRYFNATGANFGVLTNGIIYRFYTDTVKDNIMDDKPFFEFNILDFDESSVNELKRFSKSSTSTSDFNSGKIKEAARNLLYTKEVKKVIAQQLNDPSPDFVKFFVSHVYSGVRTASVVEKFTEIIKRSLKEYINDIIKEKFEEVFRKEPEPNPADAAADTPPEETGGDGINTTLEELEGFYIIKSILREEINTARIQFKDTRSYFGINLDGKVTKTVCRLRFNERTGKKSISIPDNVETGKEATTNINSLDEIYGVAEFLKSRIRYLTQDTYKSKSEKTESI

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Crispr_ID: NZ_CP012375_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_15

2928983-2929083

Orphan

Consensus_repeat	Method
TATCTATAGAACTAGAAAAGTTTACCAAACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_15

>merge|NZ_CP012375|15|2928983-2929083|CRISPRCasFinder
TATCTATAGAACTAGAAAAGTTTACCAAACAGCGGGCGTTGGGTTTCCTTGCGTCAACCCAACCTACCTTATCTATAGAACTAGAAAAGTTTACCAAACAG

>NZ_CP012375|15|14|2928983-2929083|CRISPRCasFinder
TATCTATAGAACTAGAAAAGTTTACCAAACAG	CGGGCGTTGGGTTTCCTTGCGTCAACCCAACCTACCT
TATCTATAGAACTAGAAAAGTTTACCAAACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_066029972.1\|2926205_2926805_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029973.1\|2926826_2928032_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP012375.1\|WP_066029971.1\|2924930_2926157_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662608.1\|2931385_2931622_-\|NifU-family-protein	unknown	unknown	gnl\|CDD\|376458
NZ_CP012375.1\|WP_066029969.1\|2920828_2921761_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP012375.1\|WP_081310286.1\|2935998_2936490_-\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP012375.1\|WP_066029970.1\|2922657_2923053_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP012375.1\|WP_039900206.1\|2931695_2932343_-\|DUF3386-domain-containing-protein	unknown	unknown	gnl\|CDD\|371771
NZ_CP012375.1\|WP_158524801.1\|2922028_2922193_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662605.1\|2928060_2928966_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP012375.1\|WP_066029981.1\|2940724_2942440_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|275313
NZ_CP012375.1\|WP_066029979.1\|2939046_2940510_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235998
NZ_CP012375.1\|WP_066029976.1\|2933188_2934985_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|224182
NZ_CP012375.1\|WP_002753114.1\|2932683_2932920_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP012375.1\|WP_066029978.1\|2936638_2938909_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_CP012375.1\|WP_002735260.1\|2923940_2924444_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_002758945.1\|2923335_2923650_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066029975.1\|2929856_2930945_-\|isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|333905
NZ_CP012375.1\|WP_066029968.1\|2920406_2920832_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP012375.1\|WP_066029982.1\|2942635_2943976_-\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_066029970.1\|2922657_2923053_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000105936
NZ_CP012375.1\|WP_066029973.1\|2926826_2928032_-\|hypothetical-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	7.41713e-20
NZ_CP012375.1\|WP_066029968.1\|2920406_2920832_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	8.81575e-08
NZ_CP012375.1\|WP_046662608.1\|2931385_2931622_-\|NifU-family-protein	gnl\|CDD\|376458	pfam01106, NifU, NifU-like domain. This is an alignment of the carboxy-terminal domain. This is the only common region between the NifU protein from nitrogen-fixing bacteria and rhodobacterial species. The biochemical function of NifU is unknown.	6.54207e-35
NZ_CP012375.1\|WP_066029969.1\|2920828_2921761_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	8.57069e-73
NZ_CP012375.1\|WP_066029982.1\|2942635_2943976_-\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
NZ_CP012375.1\|WP_039900206.1\|2931695_2932343_-\|DUF3386-domain-containing-protein	gnl\|CDD\|371771	pfam11866, DUF3386, Protein of unknown function (DUF3386). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are about 220 amino acids in length.	1.89831e-123
NZ_CP012375.1\|WP_046662605.1\|2928060_2928966_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	1.30377e-21
NZ_CP012375.1\|WP_066029981.1\|2940724_2942440_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	1.04181e-87
NZ_CP012375.1\|WP_066029976.1\|2933188_2934985_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	2.45575e-73
NZ_CP012375.1\|WP_002753114.1\|2932683_2932920_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.83945e-06
NZ_CP012375.1\|WP_066029978.1\|2936638_2938909_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_CP012375.1\|WP_066029979.1\|2939046_2940510_+\|amidophosphoribosyltransferase	gnl\|CDD\|235998	PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional.	0
NZ_CP012375.1\|WP_066029975.1\|2929856_2930945_-\|isocitrate-dehydrogenase	gnl\|CDD\|333905	pfam00180, Iso_dh, Isocitrate/isopropylmalate dehydrogenase.	2.71167e-45
NZ_CP012375.1\|WP_081310286.1\|2935998_2936490_-\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	4.08029e-50

>NZ_CP012375.1|WP_046662605.1|2928060_2928966_-|trypsin-like-peptidase-domain-containing-protein
MSRAIKRILAGVGGLLLGLSTPLLAVPSYAPALEPNRANAYSSQQLSEQQLLQLARAITVKVLSGQGWGSGILVEKQGSSYKVLTNDHVLGRYRSRVWQIQTPDGKIHRGELVRTVRLNNYDLGLVSFRSSQVYSIADLANVDDLTIGDEVFAAGYPFDFTFTVGKVSLLSDKSFSGGYQIGYTNKIKNGMSGGPLLNRQGKVIGINGIHAYPLWGKSYVFADGTVTSPALWEQMSRLSWAIPIGTFLKSGSSSPSASSRQRPAVSPPSLPTHREPTFSEDFPSPSSSTPREKNPAPTPLW
>NZ_CP012375.1|WP_066029973.1|2926826_2928032_-|hypothetical-protein
MSNNFLKISAALVSIAVFVVSPQIAKASTTEQIEKIAEKITVLIPSEEEGANGKITANGSGSIIAKEGRVYTVLTASHVICKDARDACKFYYDQLKIITWDGKQYPLDYNSIKKLPGVDLALVQFQSDQNYQLATLANYQVADEQFIFASGWPDPKFIGKRKRLFNVGKVLPKDITPLLKIFPPELGYEIVYTSVTYGGMSGGPVLDINGRVIAVHGQNEAEKIEKVPVPIGFSLAIPITTFLKLAPQSGIQGQINVESSPPNALSLREIGDELYKAFEVPNKNDTNPLNWLNQGNKMWRLGQLALAYAAYEKALQLDAQLYQAWYGKGLLLTYWKRHQEALAAYEQALKINPDSDTAKKLRDKLQESLGGGNTPSLTPSQPTTAPTVEPSPQPSNPRRLW
>NZ_CP012375.1|WP_066029972.1|2926205_2926805_+|hypothetical-protein
MLMKWLTNWQVSLVAAVLLTNSLVSPVMAQTGNQSDITGPILSTSDFAGQTISTPTVTGLGFQGGEPAQISVNQTAASVNTQLADNNLTSPTGTPISPTVQQPILSILTADAQAGNNITAVTAALTTVPGAPPLSVIQNLLDGLNGLTSGGAVNPANLLAAVQTYNAMILASNEAFLASPPAELRAIQASLAALVESAR
>NZ_CP012375.1|WP_066029971.1|2924930_2926157_+|hypothetical-protein
MLLKKAKRNSQMRHIFSGGIFITSCVGTAVLCDGVKAIPSPLDIDAASIRVSQEKIIINSPVELERTDRILTTNSFSTTEGLADSNLPSSLENKLEKSSLDTLATEKTGTISTLEEWKANLGTTRASQLLPAGDNNSPEVEKWQAQASTPVDTNVSPELQRLRQDFLIEEPQLRQQTLSAKLAEFVVTPSGSISTPSAFGATFGQIFGGFGFQSRTRFTNEADGGLALGGGLGDPQKIVGLDVTLAILSLFDDNAGRGSFSFKIHRSLPESFAVALGFENAINWGGTDGGSSIYGVVSKFFQLTKTTKEPFSQLTLSLGVGGGRFRSEGAIEDGVNSVGVFASAGLRIVEPVSAIVEWSGQDLNAGISLIPFPKIPLTVNLAGADLTGNAGDGARFVMSIGYNYFFPR
>NZ_CP012375.1|WP_002735260.1|2923940_2924444_+|hypothetical-protein
MKTFVERYRSWFNWTTLAMVVLGFWLSASFVIDLIIIPSLSVAGMMTQNGFASAGYLLFGIFNHLELVCAAIVLCSFVVFHRYHTLIHLPEHRSLLFAGVLLVITLIYTYFLTPNLSAMGLLAPVTASGMSGEMMSLQIGYWFLEVVKGLIAFTLLRWCWRDAFKLA
>NZ_CP012375.1|WP_002758945.1|2923335_2923650_-|hypothetical-protein
MDKDFRNYRMVCTLTFGDIYGQIIVWLIVIFLTLASTLALWSSTRQIFALATVGLVVVLSLPFLLFAFVTTLLNHIEFVPIETETNIRRGPVPGVSGSRVPAAG
>NZ_CP012375.1|WP_066029970.1|2922657_2923053_-|hypothetical-protein
MLKNLFGGKKSDFYLELKETDGEQQATATTAAAAPVVEAPAAAVESAAAPVAEKKAQKTSIKKEKQAKETPAAPVSAPAPVAPTNGKVEPQEVEFATKYLITPSLSRRRPGPSLNGFKDMARKAKLPANRG
>NZ_CP012375.1|WP_158524801.1|2922028_2922193_-|hypothetical-protein
MMLILKGISIGSSFGSSQVKQIGFLVRIASAMWNSGNLPQVFRHCWAYLNGSLF
>NZ_CP012375.1|WP_066029969.1|2920828_2921761_+|glycosyltransferase-family-2-protein
MKKITVMTPCYNEEGNIEDLYLRVKEVFNQLPNYEYEHLFIDNASQDKTVDELKKIAQKDPGVKVIVNARNFGPVRSGYYGILQCYGDAVIPIVADLQDTPELILEFVKKWEEGYKVVKAVKTPMKEGAFFYFARQIFYSLMDNLSDIKITRNFTGFGLYDRKVIDVLREVNDPYPYFRGLIEELGFESFSFEYQQQRRKRGISSYNFYRYYSEAMLGITSHSQVPLRLATMLGFALSLLSLLVALGYLIAKLLFWDYFPLGTAPIMIGLFLLASVQLFFIGIIGEYIGLMHMRILKRPLVVERERINFE
>NZ_CP012375.1|WP_066029968.1|2920406_2920832_+|GtrA-family-protein
MYILKKAKLVNLIKKHKFARFLVVGAINTLFGYFLYGSLILIGLNYKYAVLLATILGVLFNFQTTGKLVFGSKNNKLIFRFVLVYVVTFLLNVEALRIVDAIDIGIEQKTKMLIAGAILVLPMAVISFILMKLFVFREGSQ
>NZ_CP012375.1|WP_066029975.1|2929856_2930945_-|isocitrate-dehydrogenase
MTENIPTIVVMHGDQTGEELLLEALRVLQPSIIRQPLNFADFDLSLAQRRQSNNQVVHEAAEATLKTGLALKAATITPEIKGDVGSPNAILREAMNSQVILRIGRRIPGIRPIGGVNSPIAIVRMAVDDAYGAKEWRETTATGDEIAYRTSRISRATSRAVAEFTFQQAKKTGARVFGGPKFTVSATYEGMFKEELDAAARRHPEVRYQPLLIDATFALLLQTDGEALVIPALNRDGDLLSDFVLQLYGSIAGAESLVLGFDEETLAVKTIMAEAPHGTAPALEGKNIANPMAMILASAALLGYIETNEARKASRAIYESVFETIHEGKKTPDLGGQMTMSEFTDEVIRRVVSKLEVWSALG
>NZ_CP012375.1|WP_046662608.1|2931385_2931622_-|NifU-family-protein
MSLTLTPDNVEKVLDEMRPYLMSDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERRLREEIPEIAEVEQAL
>NZ_CP012375.1|WP_039900206.1|2931695_2932343_-|DUF3386-domain-containing-protein
MTVATTNARDIFRSAYENRYTWDEGFPGYTADIILTQGEEVHTGKIQVNADYSVEVTGIDDEKVQESIYNQMRDIVTHRKRGNFEASHGKNQFNFGQDDPTGAVEILVTGDAMGSNYKVRGQEICQVSRVMGPMAFTINTEESLDTGEGYISIRYNAIFRNAKTDELKGKRDFKETYEKIGNYYLPSCQVINAIDVGGEKSTTEFTFINLQLLES
>NZ_CP012375.1|WP_002753114.1|2932683_2932920_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTKLSPKVTAIIRSGEQQGYVGECVEISIVTQGNTLDEVVNNLQEAILLHLEGEDPREFGLVAKPSLQIIFELQPEYA
>NZ_CP012375.1|WP_066029976.1|2933188_2934985_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MAEETAKIKLYRKTYQLPQLNRPDLLVLQDQIQERQQLIKTGKRVRHTWLGLRKKEEPLNFEETFQELERLVGDYNQLIGFLADHKDEYRRFFQSLTEEIKEAVAVKCEKLAEKERKRQSLENSIGSADLRDTLRLQKQQIFRTVILVGRASLLMLKKIDLISESIQKLAEDQDTQKQVFSKMIGELNGYKQVYQLQLELDSLEKEAIEMAKVAINLEQYLKPIIGQFQGLIDRVVTIDGELSRSVSEVESLVQNILSSESAGSFRKNENLSASLLNFLVTSEEKRGRLAIALERAEQEGWQWTDVEIPDEEIELETAIQRINNHVIERVGNFITSVVGDSPIPPPPQQKTLLDNKTPFTENLPNGVTLKMVNLPAGEFLMGSPDSDPDARSYEKPPHQVNVNSFAIGKYPVTQAQYQAVMGTNPCHFSNNPQNPVKNVSWDDAQAFCKKLSRITGKTYRLPTEAEWEYACRGGTTTRYYFGDDANQLGDYAWYGGNSQQTIHPVGQKKPNAWGLHDMIGNVWEWCEDDWHSTYENAPKDGSAWITNYQRANPFKIVRGGSWETSSRYCRSANRHDDYTRIIGHFGYGFRVACVSPGL
>NZ_CP012375.1|WP_081310286.1|2935998_2936490_-|DUF29-domain-containing-protein
MAVETALSMKALYDQDFVLWASKTAELLKLKKFDEVDWENLIEEVECMGKSDRRAVESLLTRLIEHLFKLAYHKSERERERNVCHWVGEIAGFRTQLGEWLETTTLTNHARDYFQKAYSNARKTLIQAKAVTRDAIPLEPPFSLEQVLDGEWFPIDIDHYFDI
>NZ_CP012375.1|WP_066029978.1|2936638_2938909_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MTTPFTAAEIASEGIKPEEYEEIVKRLGRHPNKAELGMFGVMWSEHCCYKNSRPLLKQFPTTGEKILVGPGENAGVVDLGDGLRLAFKIESHNHPSAVEPFQGAATGVGGILRDIFTMGARPIAILNSLRFGNLQDARNRRIFAGVVEGISHYGNSVGVPTVGGEIYFDNAYNGNPLVNAMALGLMETEEIVKSGAKGLGNPVLYVGSTTGRDGMGGASFASAELTDKSMDDRPAVQVGDPFLEKSLIEACLEAFKTGAVVAAQDMGAAGITCSTSEMAAKGGVGIELDLDKIPVRETGMVPYEYLLSESQERMLFVAASGREGELIEIFHRWGLQAVVAGQVIAEPIVRILFKGEIAAEIPATALADNTPIYHRELLTEPPEYAQKAQLWEDATIPIPESHNEILLKLLDSPSIASKRWIYRQYDHQVQNNTVILPGGADAAVIRVRPLGANPANSRRGVAATTDCNPRYVYLDPYNGAKLAVAEAARNLSCVGADPIAVTDNLNFGSPENSIGYWQLATACQGIAEACREMNTPVTGGNVSLYNETVDAAGSPQSIYPTPVIGMVGLVPDIGQICGQGWQKAGDLIYILGFSLPTIGASEYLAVIHGLVTGKPPVIDFELERKVQAACRRGIRAGWVKSAHDCAEGGLATALAECSISGQLGAEIDLSWQHQGRFDAVLFGELASCIIVSVSPENRQDWEEYLKTQLGDYWQITGKVSEKSDNLLIFDRDKQPAIDVSLETIQQVWSKAIERRL
>NZ_CP012375.1|WP_066029979.1|2939046_2940510_+|amidophosphoribosyltransferase
MSSHLDSYLSLNRIDKPEEACGVFGLYAPEEEVAKLTYFGLYALQHRGQESAGIATYDGETVHCYKEMGLVSQVFSETVLKTLPGTHAVGHTRYSTTGSSRRANAQPAVIETRLGKLSLAHNGNLVNTFELRNVLEKRGCDFVTTTDSEMIAVAIGQEVDSGKDWIQAAIDAFSYCSGAYSLVIGTPTGIIGARDPNGVRPLVIGVLQEEGNPSRYVLASETCGLDIIGADYLRDVQPGELVWISEDGLSSVDWAMKPEKKLCVFEMIYFARPDSIVHEESLYTYRVRLGEQLAKESPVEADMVMGVPDSGIPAAIGFSRISDIPYAEGLIKNRYVGRTFIQPTQHMRESGIKMKLNPLKDVLQGKRVIIVDDSIVRGTTSRKLVKALRDAGAREVHMRISSPPVTHPCFYGIDTDNQEQLIAATKSVAQIQAQIGVDSLAYLSQDGMLTATKEDPKTFCTACFNGDYPIPVPDNVKRSKLILEKVK
>NZ_CP012375.1|WP_066029981.1|2940724_2942440_-|ATP-binding-cassette-domain-containing-protein
MEIIAQLEKVSYIYPESSNLVLKNISLAIHRGEFLGIIGPTGAGKTTLCLTLNGIVPQFYGGRFFGYATVAGLDTLTHPVSTLARYVGAVFEDPETQLLATSIENEIAFTLENLRLPREEIKARIPKVLAAVRLEGMEKKSPGELSGGQKQRLAIAAALAVQPALLILDEPTSQLDPVGSQEVFATIKELNRHLGVTIVMVSHAAEEMAEYADRLVLLREGAIEAMGTPAEIYSQVQRLQENALRPPQVATTFALINQKIGAIESIPVTLDRSFARLNELKSFYHHLTPHPPLSSVSDPLNPILRVKNLCHTYPDGTTALRDVSLDIAEGEYLLIIGQNGAGKSTLVKHFLNLLSATTGQVMIDGRSINSFSVSDLARSIGYVAQNPDNQIFNTTVEKEVSFALTNLGYSPEIVTQRTEASLEAMGLLEYRSYHPLSLPKGDRARVVIAAILAMEPRIVVFDEPTTGQDYQGAKAILEVSRQLHQMGKTVIVITHHLYLMPEYAERVIIMGQGTILLDAPIRQAYHQTDLLAKTYLTPPQAVLLAQKLGQLSGYPNSLLTPQEIADCFQRI
>NZ_CP012375.1|WP_066029982.1|2942635_2943976_-|3-phosphoshikimate-1-carboxyvinyltransferase
MSIVTLNPLQSHQDLVIDPAKITGLRGKITIPGDKSISHRSLMLGAIAEGETVIHGLLLGEDPRSTASCFRAMGVEISQLNSEKVIVKGRGLGNLEEPLEILDAGNSGTTIRLMLGLLAGHQDRFFVVTGDASLRSRPMSRVVKPLKEMGAQIWGRKANSLAPLAVSGESLQPIHYYSPVASAQVKSCLLLAGLLTEGKTTITEPALSRDHSERMLRAFGANIEVDGETNSVTVTGYPTLTGQTVIVPGDISSAAFWLVAGSIVPNSELLIENVGINPTRTGVLQVLQAMGADITLENQRVVTGEPVADLRVKSSQLQATTIAGEIIPRLIDEIPILAVAAVFAQGTTIIKDAEELRVKESDRLTVMATQLDRLGAKVRELPDGLEITGGTGLVGTEVDSFTDHRIAMSLAIAALNSRQPTTIHRAEAAGISYPDFFSTLQQICQE

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Crispr_ID: NZ_CP012375_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_16

3304608-3304703

TypeV

Consensus_repeat	Method
ATCAAGGGGGGATCAAGGGGGGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_16

>merge|NZ_CP012375|16|3304608-3304703|CRISPRCasFinder
ATCAAGGGGGGATCAAGGGGGGATCGGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGACACCTCTCTTATCAAGGGGGGATCAAGGGGGGATC

>NZ_CP012375|16|15|3304608-3304703|CRISPRCasFinder
ATCAAGGGGGGATCAAGGGGGGATC	GGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGACACCTCTCTT
ATCAAGGGGGGATCAAGGGGGGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046662860.1\|3304762_3306442_-\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP012375.1\|WP_066030044.1\|3314924_3316394_+\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_CP012375.1\|WP_066030043.1\|3314275_3314740_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046662856.1\|3299638_3300184_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|223813
NZ_CP012375.1\|WP_046662862.1\|3309497_3311009_+\|threonine-ammonia-lyase,-biosynthetic	unknown	unknown	gnl\|CDD\|236417
NZ_CP012375.1\|WP_046662868.1\|3318653_3319091_-\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP012375.1\|WP_066030042.1\|3312052_3313219_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235654
NZ_CP012375.1\|WP_081310289.1\|3313218_3313587_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
NZ_CP012375.1\|WP_066030037.1\|3293564_3296327_-\|class-I-SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223934
NZ_CP012375.1\|WP_002783420.1\|3297557_3298862_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236065
NZ_CP012375.1\|WP_066030040.1\|3307227_3309201_+\|protein-kinase	unknown	unknown	gnl\|CDD\|319862
NZ_CP012375.1\|WP_046662854.1\|3296537_3297005_+\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP012375.1\|WP_066030036.1\|3292121_3293285_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP012375.1\|WP_066030045.1\|3317099_3318443_+\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_CP012375.1\|WP_066030038.1\|3301008_3301965_-\|GTPase-Era	unknown	unknown	gnl\|CDD\|234624
NZ_CP012375.1\|WP_046662859.1\|3303138_3304419_+\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|273938
NZ_CP012375.1\|WP_002742805.1\|3297175_3297451_-\|MoaD/ThiS-family-protein	unknown	unknown	gnl\|CDD\|340594
NZ_CP012375.1\|WP_066030039.1\|3302000_3302768_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_045362346.1\|3300187_3300865_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|224489
NZ_CP012375.1\|WP_066030041.1\|3311039_3311912_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	unknown	unknown	gnl\|CDD\|234597

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046662860.1\|3304762_3306442_-\|DnaJ-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	4.09906e-81
NZ_CP012375.1\|WP_066030044.1\|3314924_3316394_+\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	1.70568e-128
NZ_CP012375.1\|WP_046662856.1\|3299638_3300184_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|223813	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair].	5.57493e-67
NZ_CP012375.1\|WP_046662862.1\|3309497_3311009_+\|threonine-ammonia-lyase,-biosynthetic	gnl\|CDD\|236417	PRK09224, PRK09224, threonine ammonia-lyase IlvA.	0
NZ_CP012375.1\|WP_046662868.1\|3318653_3319091_-\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	8.33259e-55
NZ_CP012375.1\|WP_066030042.1\|3312052_3313219_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235654	PRK05957, PRK05957, pyridoxal phosphate-dependent aminotransferase.	0
NZ_CP012375.1\|WP_081310289.1\|3313218_3313587_-\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	3.25081e-15
NZ_CP012375.1\|WP_066030037.1\|3293564_3296327_-\|class-I-SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223934	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms].	3.68416e-20
NZ_CP012375.1\|WP_002783420.1\|3297557_3298862_-\|threonine-synthase	gnl\|CDD\|236065	PRK07591, PRK07591, threonine synthase; Validated.	0
NZ_CP012375.1\|WP_066030040.1\|3307227_3309201_+\|protein-kinase	gnl\|CDD\|319862	cd16383, GUN4, porphyrin-binding protein domain GUN4. GUN4 is a porphyrin-binding protein involved in chlorophyll biosynthesis regulation and intracellular signaling, found in aerobic photosynthetic organisms. It has been implicated in retrograde signalling between the chloroplast and nucleus. GUN4 can bind protoporphyrin IX (PIX) and magnesium protoporphyrin IX (MgPIX), substrate and product of the Mg-chelatase, as well as heme and cobalt protoporphyrin IX (CoPIX). It may play a role in protecting plants from reactive oxygen species (ROS)-mediated damage.	2.83997e-74
NZ_CP012375.1\|WP_046662854.1\|3296537_3297005_+\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	2.5474e-58
NZ_CP012375.1\|WP_066030036.1\|3292121_3293285_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP012375.1\|WP_066030045.1\|3317099_3318443_+\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	1.86938e-78
NZ_CP012375.1\|WP_066030038.1\|3301008_3301965_-\|GTPase-Era	gnl\|CDD\|234624	PRK00089, era, GTPase Era; Reviewed.	1.46845e-158
NZ_CP012375.1\|WP_046662859.1\|3303138_3304419_+\|trypsin-like-serine-protease	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.4099e-119
NZ_CP012375.1\|WP_002742805.1\|3297175_3297451_-\|MoaD/ThiS-family-protein	gnl\|CDD\|340594	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins. CysO, also termed 9.5 kDa culture filtrate antigen cfp10A, together with CysM (Cysteine synthase M), forms a protein complex CysM-CysO that represents a new cysteine biosynthetic pathway in Mycobacterium tuberculosis. The replacement of the acetyl group of O-acetylserine by CysO thiocarboxylate to generate a protein-bound cysteine is catalyzed by CysM in a pyridoxal 5?-phosphate (PLP)-dependent manner. The family also includes QbsE that functions as the sulfide donor for the biosynthesis of thioquinolobactin in Pseudomonas fluorescens. A JAMM motif protein QbsD catalyzes removal of the carboxy-terminal dipeptide from QbsE. Both CysO and QbsE are similar to prokaryotic sulfur carrier proteins such as ThiS and MoaD, containing the beta-grasp ubiquitin-like fold.	1.99102e-49
NZ_CP012375.1\|WP_045362346.1\|3300187_3300865_-\|uracil-DNA-glycosylase	gnl\|CDD\|224489	COG1573, COG1573, Uracil-DNA glycosylase [DNA replication, recombination, and repair].	2.93184e-18
NZ_CP012375.1\|WP_066030041.1\|3311039_3311912_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	gnl\|CDD\|234597	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH.	9.01056e-159

>NZ_CP012375.1|WP_046662859.1|3303138_3304419_+|trypsin-like-serine-protease
MTHNIFNDNISPSNEGNPKRSKSSAMKKLFAYSSLLVLGAGLGIGATYAYSQNPLELAQNIATAATNPRPSTAAAAAPSTLVIPTNFVASVVQEVGPAVVRINASREVNGGGDFSEFANDPVFRRFFGSQIPERGERQVQRGTGSGFIISNDGKIITNAHVVEGADKVTVTLKDGRTIDGKVLGSDPLTDVAVVQVETGNLPTVKLGNSDSLQVGEWAIAIGNPLGLDNTVTTGIISAKERNGSQIGASDKRVDFLQTDAAINPGNSGGPLLNARGEVIGVNTAIIQNAQGLGFAIPIKTAQRIAEQLIATGKVEHPYLGVQMVQLTPEVKEQLADSPMADNWTIPDDSGVLLVRVMRDSPAAAAGLRSGDVLKSVGGKNVTDPDAVQEIVANTQIGDNLPVEISREGQKINLNIQVGSLNTANKS
>NZ_CP012375.1|WP_066030039.1|3302000_3302768_+|hypothetical-protein
MQRIILFLLVLILGCSNHLELSMAGNLSDRLTNYPRWMTKPVVSFASGDLVYPDWMVGNWTVTSTLIDLTAPLAPQIITPGFESNRRYLEQSIEFPVRFIEKAMARPINAAFLSTIISKPSIVADRSFNGLAISRAYLGNQSVLSVKTDPNNPNRQITFLRGAHQLISTVIARNSETPSRNQFIATEISQQIFRGETNTYLNEVETTTAYQLLSPNKILGDQVTAIYLSPQSPDYFQAPNRPVALYRYRLELRKD
>NZ_CP012375.1|WP_066030038.1|3301008_3301965_-|GTPase-Era
MNDFINSQAVNLDSAVIPIAPTGFKSGFIGIIGRPNVGKSTLMNQLVGQKIAITSPIAQTTRNRLRGIVTGERSQMIFVDTPGIHKAHHELGKVLVKNAENAINSVDLVLFVVDSSNFLGSGDRYIADLLTKNQTPTILGLNKADQQPEDREPLDDSYRTLAAENNWPLLKFSALEGMGIAELQNLLIDSLEVGPYYYPPDLVTDQPERFIMAELIREQILLQTRQEIPHSVAVVIERVEETPALTRVFAAINVERDSQKGIVIGKNGSMLKALGTSARSAIQKLIAGEVYLKLFVKVEPKWRQSRSLLAEFGYRTEE
>NZ_CP012375.1|WP_045362346.1|3300187_3300865_-|uracil-DNA-glycosylase
MTDIKTLIKQVHQEAKKEDFPIDTLIYQEAKKDPFEPVLYAGNLASQLCFFGRDLGRDEVYAGQPLIGAAGRMVREGFFQAWQGRKSHDRQELLSVCDQIFLTNTVPYKPPGNKAYSGEVKDRFRPFIEKLLVFYWQGDHIITLGTEAFKWFEPYGKPKEVDKFYLDKERFTKKLLVTLTATDEDGLKQQKKVTLLPLPHPSPLNQRYYALFPDLLQKRLTEFAF
>NZ_CP012375.1|WP_046662856.1|3299638_3300184_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRIYGNRPIKTLAGQLTRPTTARVREALFNIWQHKLSGCRWLDLCAGNGSMGAEALCRGASLVIGIEQSGRAGEIIKENWRNLATSPQQFQVIRGDVLTKLATLAGESFDLIYFDPPYESGLYLPVLTAISQYNLLDSLGEIAVEHNPKSWPAINLEGLTICRQKRYGNTTLTFYQKTDEL
>NZ_CP012375.1|WP_002783420.1|3297557_3298862_-|threonine-synthase
MTLATNIETSKFIPTFTRLVSKEGGTSYPLKALNICEETFAPLEVDYDYDLIRRTVTRESIQAGPNSIWRYRSFLPVESENPIDVGTGMTPLVKSHRLARRLGLKNLYIKNDAVNMPTLSFKDRVVSVALTRAKELGFTTVSCASTGNLANSTAAIAAHAGLDCCVFIPSDLEAGKILGTLIYNPTVMAVKGNYDQVNRLCSEVGNTYGWGFVNINLRPYYSEGSKTLGFEVAEQLGWKLPDHIVAPLASGSLFTKIYKGFQEFVKVGLVADKAVRFSGAQAEGCSPIAQAFKEGRDFVAPVKPNTIAKSIAIGNPADGVYALDIARKTGGNIESVTDAEIIEGIKLLAETEGIFTETAGGTTIAVLKKLVEAGKIDPEETTVVYITGNGLKTQEAVQGYIGEPLLIEPKLESFERALERSRTLERLEWQQVLV
>NZ_CP012375.1|WP_002742805.1|3297175_3297451_-|MoaD/ThiS-family-protein
MAVKVLVPTPLQQFTKNKATVECSASNVGDLIESLEASFPGIKARLCDEEGAPRRFLNFYVNSEDIRFLDGTKTPLKDGDEVSIVPAVAGG
>NZ_CP012375.1|WP_046662854.1|3296537_3297005_+|DUF29-domain-containing-protein
MSKTLYEQDFQVWLATTISHLQKREFAALDTDNLIEELTELGKSEKRTLESNLMILLAHLLKLKVQQDAPPSMKDSWYCSIIEHRQRIEKNLRNTPSLKSYLETAIEEAYPDARQVAIKEGKLAQFGVRIPPENDYPQICPFLPEQILDENFYGN
>NZ_CP012375.1|WP_066030037.1|3293564_3296327_-|class-I-SAM-dependent-DNA-methyltransferase
MPLSWNEIKNRAIAFQKEWEGETSEKAESQSFWNDFFNVFGISRRRVASFEQPIKKADNKQGFIDLLWKGTILVEHKSKGKDLEKATQQAKDYFPNLKEHELPRYILVSDFQRFKLYDLDSGNQWEFELSNFVDNVHLFDFIAGYEKRVYKDEDPVNIQAAELMGKLHDCLKEIGYMGHNLEVYLVRLLFCLFADDTGIFNKGIFWEYIDIHTKEDGSDLAMHIAYIFQVLNTPEDKRLKNLDENLTQFPYINGKLFEESLPLAAFDSKMRVMLLEACAFDWGKISPAIFGSMFQAVMNPKERRNLGAHYTSEKNIQKVIKPLFLDDLHREFEKIKGNRNKLLEFQKKIANLYFLDPACGCGNFLIITYRELRDLEILVLQELDKLDKTGQLVTDISAIIQVDVNQFAGIEYDEFAVRVAEVAMWLIDHQMNIKVSNTFGQYFVRLPLKKAAKIVHGNALRIDWEEVISKEKLNFILGNPPFVGKQLQNADQKADMNRVLGDIKGAGVLDYVTAWYIKAAEFIQNSLIRCALVSTNSISQGEQVGIIWQELYQKYKIKIHFAHRTFSWSNEAKGNAAVHCVIIGFGLEDIDNKRIFDYADIKGEPTERKVKNINPYLVEGSDLVILSRRKTISSVPEINFGSMPNDGGHLILSQSEKEELVKNEPDSDKWIRRYTGAQEFINGYSRYCLWLVNIQPQELKKSKEIYRRVEEVRKVRSESNRKTTQELSKFPTLFGENRQPDTNYLLIPGVSSENRKYIPTGFLSPDIITSNSCLIIPYATLYHFGILTSEMHMAWVKYVCGRLKSDYRYSNTIVYNNYPFPENITDKQKQTVETCAQTVLDTRVKYPDSSLADLYDPLTMPPDLLKAHQKLDKAVDLCYRPQPFTSELNRIEYLFELYEKLTAPLLPTSKQKPPKRKNPQ
>NZ_CP012375.1|WP_066030036.1|3292121_3293285_-|pyridoxal-phosphate-dependent-aminotransferase
MKLASRVNQVTPSLTLAIDSLAKEMKKNGEDVCSFSAGEPDFDTPIHIKAAAKKALDEGKTRYGPAAGEPGLRKAIAEKLLRDNQLAYNADNVIVTNGGKQSLYNLIMALIEAGDEVIIPAPYWLSYPEMVTLAGGTSVIVNTSLENQYKITPEQLEAAITPKTKLFVLNSPSNPTGIVYTPEEIAALAKIVVEKDILVVSDEIYEKILYDGAIHRSIASFGPEIFQRSIISNGFAKAFSMTGWRVGYIAGPVEIVEAMTNIQGHSTSNVCTFAQYGAIAALESPQDCIEEMVKAFSERRQYILERVRSLPGLNCPTPNGAFYVFIDISQTGLKSRDFCQKLLETQKVAAIPGIAFGADDCIRLSYATDLKTIEKGFDRIDKFIGTL
>NZ_CP012375.1|WP_046662860.1|3304762_3306442_-|DnaJ-domain-containing-protein
MAKKLDFVIPAVGGVTGANLSACLGNIGLVGGFGGISVGLVGMTGIGILTSSAIYASLQGLETNDHNVGLALGIGSLGGIGIYSTFGGVGVAVKGTAFGVGVGSMAIAGGIVGLGVYGVMKMLSPTYSDNNFYSNLEFFDRITREYEEALFWQEVTGKYENLEAELQQLLEEVSIQENQQLDSTEITIPERLSWQCFQTLKGHQENIGAIDVSPDGKIIASAGEDQTIKLWQRETGKLIYSFVGVNEPIQTLAISPNGKSIIAGGLDGRISQWQLDTKQYKSSFFARVNAPHSHDGVILQLAFAANERFIVSASNDKTLRIWGYHTGELKRTLIGHEEAVNTCAISPDSQIIASGSDDKTIKLWRFDHSYAYQTFIGDRAAVNSLAFSNDGQYLISGGSDKAIKIWDIKTGEMIKSWQAHEQAIISIAINPHRHLIASASRTEIKIWQGQTGELIKILRGTAPLKFSPDGQFLITGSYGDKVKIWSEMLGELEILPPDSEDWWEVLEVSKNASFSEVKQRYYQLARQYHPDHNSSAMAIKIMQKINRAYERFLFSISQQ
>NZ_CP012375.1|WP_066030040.1|3307227_3309201_+|protein-kinase
MSLCLNPDCSHQNTPTDKFCHKCGSQLLLRERYRALKLIGQGGFGKTFQAIDEDKPSKPYCVIKQFFPSAQGTETLQKAAELFKEEAIRLDSLGRYPQIPELYAYFTGNGGRQYLVQEYIEGQNLEQELKQEGVFNEAKIKHLLSEILPILEFIHSKQVIHRDIKPENIIRRKSDNKLILVDFGAAKFVSPLNRSMTGTIIGSAEYIAPEQGNGKAVNASDLYSLGVTCLYLLTGISPFDLFDGGEHQWVWRQWLVNNPVSNDVVNILDKLIEFGTKKRYQSASEVLQALQIKTSVSIPQTNIQKPVNPVISVTQTPPSIQLKSAKGIDYRNLEDLLKQKRWKEADEETANLVRKVTNRVKDWLRDEDIQKFPCEDLRTIDQLWVYYSNGKFGFSVQGQIYREIGGMEEYNERNWDIFGSLVGWQKNNSWNWQDINYSLQAPQGHLPLIRYGYKGQGSYIIYHLTSRIFVCQTSSHQIINQKQPVATIIQPPIISVPQTPPSIQLKSAKGIDYRNLEDLLKQKRWKEADQETERVMLQAAKRTKERWLRKEDIDKFPCEDLRTIDQLWLKYSNGKFGFSVQAKIYHDLGGTQEYNDKIWNAFGDKIGWRVRVGFMKNSWIYYKDVTFDLKAPQGHLPFEKWKNNWRSLFSRVETCKM
>NZ_CP012375.1|WP_046662862.1|3309497_3311009_+|threonine-ammonia-lyase,-biosynthetic
MYCDYLVQILTARVYDVAQETPLEFAPNLSQRLHNQLLLKREDMQSVFSFKLRGAYNKMAYLSRDLLQKGVIAASAGNHAQGVALGARQLGTQAIIVMPVTTPQVKIDAVKARGGIVVLHGDTYDDSYTYARQLEAEKGLTFIHPFDDPEVIAGQGTIGMEILRQYQQPIEAIFVAIGGGGLISGIAAYVKRLRPEIKIIGVEPVDSDAMNQSLKAGYRVRLSQVGLFADGVAVREVGEETFRLCQQYVDEIILVDTDDICAAIKDVFQDTRSILEPAGALAVAGAKAYVEREGIEDKTLVAVACGANMNFDRLRFVAERAELGERREALYAVTIPEQPGSLRRFCECVGKRNLTEFSYRIADEKEAHIFVGAQIENRSDAKKLAESFEACGFKTLDISDDELTKLHLRHMVGGRSHLADYELFYRFEFPERPGALMKFVASMSPHWNISVFHYRNNGADYGRIVVGIQVPPDEMNQWQAFLDTLGYRYWDESQNPAYQLFLG
>NZ_CP012375.1|WP_066030041.1|3311039_3311912_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH
MNQDFPHISVLSQELIAGLNIQPGGHYLDLTLGGGGHSRLLLEAHPETTVTAIDRDQSALEAAKISLAPYLDSRLTLWWGNFADYKGQNSSFDGIIADLGVSSPQFDQSERGFSFRHTAALDMRMDRCQSLTAADIINHWQEKELADLFYQYGEERLSRPIARSIVQKRPFTTTTELAAVIASSVPASYRYGRIHPATRVFQSLRIAVNQELDSLQKLLDQAPHWLKSGGIIAMISFHSLEDRLIKYGFREDNSLKIITKKPIIPSREEQAKNPRSRSAKLRIAQKISCS
>NZ_CP012375.1|WP_066030042.1|3312052_3313219_-|pyridoxal-phosphate-dependent-aminotransferase
MKNLLSRMDGVQTPIIPVVGQLIKANPGTISLGQGVVSYYPPQEALESLSLFLANPKNHQYQSVAGIPPLLAVIRQKLAEDNRIEISDKQAIFVTAGSNMAFMNAILAITSPGDEIILNTPFYFNHEMAIKMADCQVILVATDKNYQLRPAAIEEAITEKTKAVVTISPNNPTGVVYPENTLREVNRICQKKGIYHIHDEAYEYFTYNHARHFSPGAIVGSESWTISLFSLSKAYGFASWRIGYMVVPEHLSEAINKIQDTILICPPVVSQYAALGALQVGKSYPLEQLKTISQVREICLNALESIGDICDVATAEGAFYFFLKITTDKNDFQLVKSLIERQRVAVLPGSTFGITEGCYLRLAYGALSPETALTAVERLVKGLRYFSQ
>NZ_CP012375.1|WP_081310289.1|3313218_3313587_-|FHA-domain-containing-protein
MSKAFLLHEETGTLLEISGRKNRFYLGKVNPKVTVDLDLSHLPDAKIVSRVHAIIYVEKEGFYLEDAGSLNGTYLNGENLQSGRKKLKSGDRITLGYYRAINLLFEIESAHPPQYTFKSLAN
>NZ_CP012375.1|WP_066030043.1|3314275_3314740_-|hypothetical-protein
MATATQFLNISDLTKDDYCVFGLAICFLKQEGELEKVAVLEPIPSAALEAIVKGIPTSYEFARAMALGEVFQDDNPQIPSNFPDNTQLCENFVERAIAATRTYKNQPHLQGLIPLGGQKDGLNFSLEKKRILNAVHVVRTEDNVKQHSHTHKVL
>NZ_CP012375.1|WP_066030044.1|3314924_3316394_+|TldD/PmbA-family-protein
MSPTLLISKELPTLKYNPSLERFDSSWAAPLSTLLGLGRAAGATFIEFFLERVNYISCLAEDDSITSLSPKLSTGAGIRLFRGKADCYVSTNDLSFQGLKNALEKGLSILGLNLPSPNAYIPEINLEMFRDYATVKNKDIWLNNCSSLGEMGDILLNANVQLNQKASHVQSRRAAYFRDWQEILVAASDGTFARDIRLTQSVGYNLLCADGTNRSSIGKRVGNTSNPDFLRTWNAEESAAEVAESAGKMLYADYVESGSYPIVMANEFGGVIFHEACGHLLETTQIEQKTTPFLDKKGEKIAHENLTAWDEGLSDKAFGTIDMDDEGMPAQRTLLIENGILKNFIADRTGSIKTGHPRTGSGRRQNYTYAAASRMRNTYIAPGEYTLDNLFNSIDKGIYCKKMGGGSVGATGEFNFAVEEAYLIENGNLTKPLKGATLIGSAKEIMNKISMCSQDLGLAAGFCGSVSGSVYVTVGQPHLKVDSITVGGR
>NZ_CP012375.1|WP_066030045.1|3317099_3318443_+|TldD/PmbA-family-protein
MPKVEDIAQIANSSAQALGIAKYDIYGSSVDETDVDVFQGEPKQVQASNRSSVIVRVWNQDNQVGVTSTTDVDPVGLQLALKTAQEASVFGVKENVPDFSPAATAPTTEVASEMSNQAPVSTLIDKLLAAEKSLLAAHPAIASVPYNGLGQQQVRRFYLNSDGAMRQEARSYASVYLYTKTEQEGKKPRSAGAFRVSPGLEKLDIDGCIEEAISKTVSHLDYQPITTGKYLVVFAPRAFLSLMGAFSNLFNAQNVLDKQSLSTPESLGTQIAATALNLCDDSLHPANVAAETFDSEGTPTRRVELIKEGILSNFLHSTITAKRMNTEPTGNGNIGSKVTVSPHFYHVFASANQPKSYSLETAENVVLIDSLQALHAGVNSLQGSFSLPFDGWLVNKNERISIDSATVAGDILTLLKSIVYLEPEAVITPSGVCPYVWVEGLSITGEA
>NZ_CP012375.1|WP_046662868.1|3318653_3319091_-|DUF29-domain-containing-protein
MSSTAYETDYNQWLKETVKQLQERNFEQVDWDNLIEEIESMGKSDRRALMSLLTRLIEHLLKLAYWQEEKKRSGNHWAAAIVNFRAQIQHRLEDSPSLRSELAAMYDKVYPVAIKSVSQLFSLNSDAHISLEQTLDDNWFPPAEK

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Crispr_ID: NZ_CP012375_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_17

3436798-3436901

Orphan

Consensus_repeat	Method
CCCCTTCGACGTAGCTCAGGGCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_17

>merge|NZ_CP012375|17|3436798-3436901|CRISPRCasFinder
CCCCTTCGACGTAGCTCAGGGCAAGCGAGTAACGATTGGGAAAGAGATAGCGGTGATGATTGGAATTTTGATCCACCCCCCCTTCGACGTAGCTCAGGGCAAGC

>NZ_CP012375|17|16|3436798-3436901|CRISPRCasFinder
CCCCTTCGACGTAGCTCAGGGCAAGC	GAGTAACGATTGGGAAAGAGATAGCGGTGATGATTGGAATTTTGATCCACCC
CCCCTTCGACGTAGCTCAGGGCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046662948.1\|3443419_3444574_+\|urea-ABC-transporter-permease-subunit-UrtC	unknown	unknown	gnl\|CDD\|132449
NZ_CP012375.1\|WP_046662944.1\|3438869_3439490_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238734
NZ_CP012375.1\|WP_002734613.1\|3425831_3426143_-\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|132897
NZ_CP012375.1\|WP_046662942.1\|3434766_3435510_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_CP012375.1\|WP_002777291.1\|3444737_3445484_+\|urea-ABC-transporter-ATP-binding-protein-UrtD	unknown	unknown	gnl\|CDD\|274568
NZ_CP012375.1\|WP_002782757.1\|3439684_3440017_+\|TMEM165/GDT1-family-protein	unknown	unknown	gnl\|CDD\|225030
NZ_CP012375.1\|WP_002741693.1\|3426908_3427193_-\|Nif11-like-leader-peptide-family-natural-product-precursor	unknown	unknown	gnl\|CDD\|369562
NZ_CP012375.1\|WP_002734724.1\|3430887_3431082_+\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|177033
NZ_CP012375.1\|WP_066030062.1\|3428902_3429289_+\|DUF2358-domain-containing-protein	unknown	unknown	gnl\|CDD\|370865
NZ_CP012375.1\|WP_002800735.1\|3437392_3438820_+\|glycogen-synthase-GlgA	unknown	unknown	gnl\|CDD\|234809
NZ_CP012375.1\|WP_046662946.1\|3440844_3442161_+\|urea-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|372603
NZ_CP012375.1\|WP_002732425.1\|3440110_3440386_+\|TMEM165/GDT1-family-protein	unknown	unknown	gnl\|CDD\|225030
NZ_CP012375.1\|WP_002770735.1\|3431122_3431338_+\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_CP012375.1\|WP_066030063.1\|3429298_3430711_-\|DUF697-domain-containing-protein	unknown	unknown	gnl\|CDD\|368297
NZ_CP012375.1\|WP_046662947.1\|3442255_3443416_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|200272
NZ_CP012375.1\|WP_066030064.1\|3431957_3434186_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP012375.1\|WP_008202451.1\|3435493_3436111_+\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|180312
NZ_CP012375.1\|WP_066030061.1\|3427497_3428838_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|237677
NZ_CP012375.1\|WP_046662950.1\|3446242_3447466_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|272992
NZ_CP012375.1\|WP_046662949.1\|3445522_3446221_+\|urea-ABC-transporter-ATP-binding-subunit-UrtE	unknown	unknown	gnl\|CDD\|274567

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046662948.1\|3443419_3444574_+\|urea-ABC-transporter-permease-subunit-UrtC	gnl\|CDD\|132449	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC. Members of this protein family are ABC transporter permease proteins associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.13269e-150
NZ_CP012375.1\|WP_046662944.1\|3438869_3439490_-\|VWA-domain-containing-protein	gnl\|CDD\|238734	cd01457, vWA_ORF176_type, VWA ORF176 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. The members of this subgroup are Eubacterial in origin and have a conserved MIDAS motif. Not much is known about the biochemistry of these.	3.68167e-97
NZ_CP012375.1\|WP_002734613.1\|3425831_3426143_-\|BMC-domain-containing-protein	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	1.26093e-45
NZ_CP012375.1\|WP_046662942.1\|3434766_3435510_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	2.53149e-23
NZ_CP012375.1\|WP_002777291.1\|3444737_3445484_+\|urea-ABC-transporter-ATP-binding-protein-UrtD	gnl\|CDD\|274568	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.76283e-152
NZ_CP012375.1\|WP_002782757.1\|3439684_3440017_+\|TMEM165/GDT1-family-protein	gnl\|CDD\|225030	COG2119, COG2119, Predicted membrane protein [Function unknown].	1.64983e-24
NZ_CP012375.1\|WP_002741693.1\|3426908_3427193_-\|Nif11-like-leader-peptide-family-natural-product-precursor	gnl\|CDD\|369562	pfam07862, Nif11, Nif11 domain. This domain is found mainly in the Cyanobacteria and in Proteobacteria such as the nitrogen-fixing bacterium Azotobacter vinelandii. It is found in Nif11, a protein described in Azotobacter as linked to nitrogen fixation. It also constitutes a leader peptide in Nif11-derived peptides (N11P), which are thought to be post-translationally modified microcins derived from a putative nitrogen-fixing protein. N11P sequences have a classic leader peptide cleavage motif, usually Gly-Gly, which marks the end of family-wide similarity area and the beginning of a low-complexity region rich in Cys, Gly and Ser.	8.57795e-08
NZ_CP012375.1\|WP_002734724.1\|3430887_3431082_+\|50S-ribosomal-protein-L33	gnl\|CDD\|177033	CHL00104, rpl33, ribosomal protein L33.	2.51159e-28
NZ_CP012375.1\|WP_066030062.1\|3428902_3429289_+\|DUF2358-domain-containing-protein	gnl\|CDD\|370865	pfam10184, DUF2358, Uncharacterized conserved protein (DUF2358). DUF2358 is a family of conserved proteins found from plants to humans. The function is unknown.	3.81341e-42
NZ_CP012375.1\|WP_002800735.1\|3437392_3438820_+\|glycogen-synthase-GlgA	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
NZ_CP012375.1\|WP_046662946.1\|3440844_3442161_+\|urea-ABC-transporter-substrate-binding-protein	gnl\|CDD\|372603	pfam13433, Peripla_BP_5, Periplasmic binding protein domain. This domain is found in a variety of bacterial periplasmic binding proteins.	0
NZ_CP012375.1\|WP_002732425.1\|3440110_3440386_+\|TMEM165/GDT1-family-protein	gnl\|CDD\|225030	COG2119, COG2119, Predicted membrane protein [Function unknown].	1.90018e-23
NZ_CP012375.1\|WP_002770735.1\|3431122_3431338_+\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	1.87588e-32
NZ_CP012375.1\|WP_066030063.1\|3429298_3430711_-\|DUF697-domain-containing-protein	gnl\|CDD\|368297	pfam05128, DUF697, Domain of unknown function (DUF697). Family of bacterial hypothetical proteins that is sometimes associated with GTPase domains.	7.1535e-43
NZ_CP012375.1\|WP_046662947.1\|3442255_3443416_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|200272	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB. Members of this protein family are ABC transporter permease proteins associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	6.21225e-68
NZ_CP012375.1\|WP_066030064.1\|3431957_3434186_+\|GAF-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.46895e-39
NZ_CP012375.1\|WP_008202451.1\|3435493_3436111_+\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|180312	PRK05920, PRK05920, aromatic acid decarboxylase; Validated.	1.04827e-128
NZ_CP012375.1\|WP_066030061.1\|3427497_3428838_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|237677	PRK14333, PRK14333, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_CP012375.1\|WP_046662950.1\|3446242_3447466_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	1.07172e-170
NZ_CP012375.1\|WP_046662949.1\|3445522_3446221_+\|urea-ABC-transporter-ATP-binding-subunit-UrtE	gnl\|CDD\|274567	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	2.20756e-129

>NZ_CP012375.1|WP_008202451.1|3435493_3436111_+|UbiX-family-flavin-prenyltransferase
MKELSKPLILGVTGASGLIYAVRTLKYLLLADYTIDLVASKSAYTVWQAEDQTRMPPEPELQEQFWRSQCGVMEGGKLRCHRWGDVGATIASGSYRTLGMVIIPCSMSTVAKLAGGLSSDLLERAADVQIKEGRKLVLVPRETPFSLIHLRNLTTLAEAGVRIVPAIPAWYHHPQSIEDLVDFVIARTLDQLDIDCVAINRWQGH
>NZ_CP012375.1|WP_046662942.1|3434766_3435510_+|HEAT-repeat-domain-containing-protein
MYDNEILDSSNSSNNPLDGSDPDQAAEIPPDPEEMLSLLTSAHVSERMIAARAFCELRDERAIAPLLEMLNDVCPLVRVSVAYALGRNPSLSAVEPLIDLLARDWNGYVRKGVVWALGNCGDHRAIEPLVHALKTDISAVRLWAASSLAQIAKVNYEDIITVLPPLIEGLRRDLIAAVRSNCAWSIGQLCRELPFNVIYATAIDALIEALVEDEDLGVKEDARGALLKVGDPRGLQLIEELELEGII
>NZ_CP012375.1|WP_066030064.1|3431957_3434186_+|GAF-domain-containing-protein
MEKQPSAIDTELDAQLKEEDSEQFLRSIFNSVQASIFVVDVLENRDFRYVGANPVHECWTGLRSSDIKGKTPEQILPPDDARSVRQHYSDCVRYGTTISYEQYLPFQNIPYWWLTTLTPLRDNNGCIYRLVGTSTNITERKQAEEALRLQAEREQLLGVMQERIRQSLDLDRILQRTVKEVRQFLNCDRVLIYRLFPDHSGMIVVESHAARINSVLGNRIQDPCFNLSSERLENYRRGRIQVIENVHNSGLDPCYRSLLTSLQVQANLVVPIICDNQLWGLLIAQNCQKTRSWQSQEIDLLKQLAIQVGIAIQQAELHQRVKCLNTALESEVQQRTAELQMTLKYEALIGRITEKIRDSLDENHILQTTTRELVQVLPVERAQIELYDPSRSKATIVHEYTTQELICQGITRQISDFPEIYQPLLHKQILQFVDRLPLGNPQIGRVNRCACAIFDDQGFLGNLWLIRPANHIFNSLETNLIQHIATECAIAIRQARLYESSQAQVRELEKLERLKSEFLKTLSHELRTPITSIRLAVETLESLLEYRGIEIDPEDSIGQLLQILNIESQRQSKLVNDLLTLTYLDAESEPPAIEAIDLLSWLPLLVEPFRTLTRERQQQLILDIDGDIPEINTSLCHIERIIAELLTNASKYTPEQGIIRVNVKRADEQILISVSNSGVEIAPEELLRIFAPFYRIPHQDPWRYSGTGLGLALVCKLIKPLNATIDVTSANAVTTFTLTLPI
>NZ_CP012375.1|WP_002770735.1|3431122_3431338_+|30S-ribosomal-protein-S18
MSYYRKRLSPISPSQPIDYKDTELLRKFITERGKILPRRITGLTSKQQRDLTEAVKRARLMALLPFVNQEA
>NZ_CP012375.1|WP_002734724.1|3430887_3431082_+|50S-ribosomal-protein-L33
MASKKGVRLIITVECTECRSNPDKRTPGVSRYTTSKNRRNTTGRLEIKKYCPHCNKHTVHKEIK
>NZ_CP012375.1|WP_066030063.1|3429298_3430711_-|DUF697-domain-containing-protein
MTVRLGKPILVTGIGITIAFTLGETLNSTLSEIGSWGVLGAIALGAGIWFWQKPNAKIDFSPPTPLSLEKVKQAISKAEKIINYLAKEDPDQDLTPLKTTLTQLNQEFSRQDLKIAITGARKTGKTALKKLLESGNFGESIAFLETEPLLTLDSTANQQKSLAADLVLYLINGDLTDSEWQILQQFDRMHQRVILLLNKQDRLPAETREEILLSLKQRLKETIPAHHILAIAAAPEPLKVRQHQSNGEIKEWTEPQTVVIAPLDNHLRQIIEQEKQELVLGTIWRQALELAKETKQLLNQSRRKKALPVIEQYQWIAATATFANPLAALDLVLAAATNAQMLVDLGAIYQQKMSLEQAKTAMTTLGKMMVQLGMVEVTTQALGTILKGNAITYIAGGTVQGIGAAYLTRLAGLSLIEYFQEQEINEQLNNDWNWTSLQNKVKQVWEQNQRLAFLQDFVKQTSARWSAFSG
>NZ_CP012375.1|WP_066030062.1|3428902_3429289_+|DUF2358-domain-containing-protein
MDIIAILQQDYQRFPLDQTYDIYADNVYFQDPLNQFRGIKRYREMIGFMSQWFQAIKMDVHAIEQQGNIINTRWTLHWITPLPWRPRIAISGRSQLTLDDNNLIISHIDYWDCSRWDVLRQHLPFPSS
>NZ_CP012375.1|WP_066030061.1|3427497_3428838_+|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MNKSPRRYHITTFGCQMNKADSERMAGILEDLGFQWSEDANEADLILYNTCTIRDNAEQKVYSYLGRQAKRKQTQPDLTLVVAGCVAQQEGEQLLRRVPEVDLIIGPQHANRLGDLLQQVFDGSQVVATEPIHIMEDITKPRRDSNITAWVNVIYGCNERCTYCVVPGVRGVEQSRTPAAIRAEMEQLGQQGYKEITLLGQNIDAYGRDLPGVTASGRHLHNFTDLLYYIHDVAGIERLRFATSHPRYFTERLIKACQELPKVCEHFHIPFQSGDNDILKAMKRGYTQEKYRQIIANIRDLMPDAAISADAIVGFPGETEAQFENTLKLVDEIGFDQLNTAAYSPRPGTPAAIWDNQLSEQVKSDRLQRLNHLVATKAAERSQRYLGRIEEILVEEVNPKDASQVMGRTRGNRLTFFTGNLEELRGTFVKVKITEVRPFSLTGVIF
>NZ_CP012375.1|WP_002741693.1|3426908_3427193_-|Nif11-like-leader-peptide-family-natural-product-precursor
MSKNQVFDFFALAAKNEELGQKMRSTQDPQQLLEIARSQGFDFSRPELEAALKSLHESPDFFQKLAHAVLEVFSPNHDNYPSIGVQPYEGEIDR
>NZ_CP012375.1|WP_002734613.1|3425831_3426143_-|BMC-domain-containing-protein
MPIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGVENANRVNGGQVLSTHIIARPHENLEYVLPIRYTEEVEQFRSY
>NZ_CP012375.1|WP_002800735.1|3437392_3438820_+|glycogen-synthase-GlgA
MRILFVGAEAAPIAKVGGMGDVIGALPKVLRQLGHDVRIFLPYYGFLAEKMDIPSEPIWSGFAMFQDFSVYETVLPDTDIPLYLFGHLAFSGRSIYGGEDEAWRFTLFANGAAEFAWNYWKPQVIHCHDWHTGMIPVWMHQDPDISTVFTIHNLAYQGPWREALEKMTWCPWYMQGDNTMAAAVQFANRVTTVSPTYARQIQTPIYGENLEGLLSYISGNLVGIVNGIDTEVYNPAKDVYLKQNFTPETIEKRLANKIALQEEVGLQVSRNAFVMGMVTRLVEQKGIDLVMQILDRFLTYTDAQLIILGTGDRYYETQLWEMTSRFRGRMSLHLLYSDALSRRIYGGADALLMPSRFEPCGISQLMAMRYGCIPMVRRTGGLVDTVSFHDPIQERGTGFSFDRYEPLDLFTCMIRTWESFRYKQDWQKLQQRAMTQDFSWYKSALEYLKIYKQITGQSDQLSDEEKDKFVALTSS
>NZ_CP012375.1|WP_046662944.1|3438869_3439490_-|VWA-domain-containing-protein
MASESVVQDRDYTLIIDKSGSMSTADKPSEKTRWQIAQESTLALARKCEEIDPDGITIYLFSGRFRRYDNVTSDKVTQIYQENEPMGRTDLAAVLQDALNNYFQRKTAGKTKPNGETILVITDGEPDDRKAVMRQIIEASRKLDSDQELAISLIQVGHDRQATEFLKALDDQLESAGAKFDIVDTITIDDMEDMTLAEVLLNAITD
>NZ_CP012375.1|WP_002782757.1|3439684_3440017_+|TMEM165/GDT1-family-protein
MTDSKSIASTEKKPDQPPSWSFWTVFSSTFLTIFFAEIGDKTQLATLLISAESQSPWVVFAGAASALIATSLLGVLIGYWIARRLSPKTLDIGVAILLLLITGLLIGDIL
>NZ_CP012375.1|WP_002732425.1|3440110_3440386_+|TMEM165/GDT1-family-protein
MNWQLFGLTFITVFLAEIGDKSQLVAIALGGSSKSPKAVFFGSITALICTSFLGVLAGGSMAQLFPAKILKAIAAIGFALLAVRLLWPDSD
>NZ_CP012375.1|WP_046662946.1|3440844_3442161_+|urea-ABC-transporter-substrate-binding-protein
MSNLGRRKFLLYGSAALGTSILLKACGGNQSQTPTASPSPAASPAPASGETIKVGILHSLSGTMAISETSVVDAEKLAIEEINAAGGVLGKQIEAVVEDGASDWPTFAEKATKLIDQDKVATVFGCWTSASRKAVLPVFEAKNHMLWYPVQYEGQECSRNIFYTGAAPNQQIEPAVTWLLENKGKKFFLVGSDYVFPRTANTIIKEQLKAKGGETVGEDYLPLGNTEVTPIITKIKQALPDGGVIFNTLNGDSNVAFFKQLQAAGLTPDKYPVMSVSVAEEEVKQIGKEYLLGQYASWNYFQTVDTPANKKFVEAFRAKFGQERVTNDPMEAAYIMVYLWKQAVEQAGTADDLDKVRAAAVGQKFDAPEGPVQMFPNHHISKTVRIGQVRDDGLFDIVWSTPGVVDPQPWNQFVPETKGFACDWTDPAKGGKFKMEKS
>NZ_CP012375.1|WP_046662947.1|3442255_3443416_+|branched-chain-amino-acid-ABC-transporter-permease
MSALLEGLFNGISIGSVLLLAALGLAIVFGLMGVINLAHGELMMLGAYSTFVVQNIFKGFGSPLFDTYVLFALPIAFLVSGLAGLLLERGVIRFLYGRPLETLLATWGVSLILQQFVRSVNGLLVISLIVFCLLFFGAMTLLSRRLDWERIRNLAIGVTLPLSLAIAGLLGYLLSFNPVLAKPWFSARNVDVTAPAWLRGGLPLPGFQMPYTRLFIIILTAICLLGTYWFLNKSSWGLRIRAVTQNRQMSACLGIPTNQVDALTFALGSGLAGVAGCAISFLGSVGPNVGQNYIVDTFMVVVVGGVGNLLGTIIAAMAIGVANYLIGSGTFALIFGSVEALKPLTDFFTFFSTTSMAKVMIFALIIAFLQFKPAGIFPPKGRTAEL
>NZ_CP012375.1|WP_046662948.1|3443419_3444574_+|urea-ABC-transporter-permease-subunit-UrtC
MITETITRNESRQREKKKLITEVAVIVGLVVIFALLLPLTLSAFRLRLLGRFLSLAIVALGIDLIWGYTGLLSLGHGIFFALGGYALAMYLNLQLPPGQLPEFFTLYGVTELPFVWQPFYSLPLTILALIIVPAIMAGLLGYLIFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDTQTIFGLLVGSDAVQVAFYLLTIVCLLAIYLLCRWLTTGRFGRLLVAIRDDEVRVRFSGYDPTWFKVLVFAISGAIAGVAGALYTVQTGIITPNSMDVAFSIEMVIWVAVGGRATLVGAVVGTLLVRMAQTFLSEQFPEVWVFFQGALFLIVVTVLPDGLLGGIKRLLTHFGFRKTLITYPSIEEAPEVQLEKEELEHK
>NZ_CP012375.1|WP_002777291.1|3444737_3445484_+|urea-ABC-transporter-ATP-binding-protein-UrtD
MTGKILEIENLTVSFGGFKALNNLNFSMDTGELRVIIGPNGAGKTTFLDVITGKVQPTIGRVLFKGRDLRKIPEFAIARLGIGRKFQTPRVYLNLTVRENLDLVSNRNKNVFSTLFGRPPLEDSRKVIGLLETIGLTAKADLPASLLSHGEKQRLEIGQLVAQSPDLLLVDEPVAGLTDEETENVGNLLLNLAESHSIIVIEHDMEFVRQIARKVTVLHQGTVLCEGNMEQIQNDPKVIEVYLGSSEE
>NZ_CP012375.1|WP_046662949.1|3445522_3446221_+|urea-ABC-transporter-ATP-binding-subunit-UrtE
MLHISDLNVYYGESHILRDVDLNINAGEMVCLIGRNGVGKTTLLKTLMGILKPRAGAINYEQQNLINKTSDQRARLGLGYVPQGRDIIPRLTVKENLILGLEALPTRRKNATIPEEIFDLFPVLKPMLSRMGGDLSGGQQQQLAIARALVGEPKLLILDEPTEGIQPSIILEIEAAVRRIVASKGIAVLLVEQHLHFVRQADRYYAMQKGGIVASGFTSELSQEVIQRFLAV
>NZ_CP012375.1|WP_046662950.1|3446242_3447466_+|NAD(P)/FAD-dependent-oxidoreductase
MTQIVVIGGGAAGFFGAIKAAESNPKAGVTILEAAKEPLGKVRISGGGRCNVTHHCFDVSQLVNYYPRGGKALRGAFSRFQPQDTIKWFELRGVKLKTEADGRMFPSTDNSETIVNCLRESATFAGVNLRLNSPVKSVKKQEESFLIELKREEQIRADKLLIATGSSPFGYRTAQDLGHSLVSPVPSLFTFQIADPRLQDLLGVTVDKVRVRLGGSKLEQIGPLLITHWGVSGPAILKLSAWGARVLHEHHYRMPLIINWLGDYHPEKLREIILQTKSEYPKRKLFNYCPFEQLPKRLWQSLLSYLTVNAETPWAELSKNTLNRLMTELQQGEYQIKGKGVFKEEFVTSGGVNLQEVDFKTMESKICPGLYFAGEVLDIDAVTGGFNFQSAWTTGYLAGQAMGNRRV

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Crispr_ID: NZ_CP012375_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_18

3543027-3543128

Orphan

Consensus_repeat	Method
AGAAGCCGATACTTCCCCCATTGTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_18

>merge|NZ_CP012375|18|3543027-3543128|CRISPRCasFinder
AGAAGCCGATACTTCCCCCATTGTCCCCAGAATCGAGAAACACATCGAGAAAACAAGCGAGAGTGTTGCCCTGAGAGAAGCCGATATTTCCCCCATTGTCCC

>NZ_CP012375|18|17|3543027-3543128|CRISPRCasFinder
AGAAGCCGATACTTCCCCCATTGTCCC	CAGAATCGAGAAACACATCGAGAAAACAAGCGAGAGTGTTGCCCTGAG
AGAAGCCGATATTTCCCCCATTGTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_080949779.1\|3536257_3537208_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP012375.1\|WP_046663012.1\|3531977_3533369_-\|NAD-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|223358
NZ_CP012375.1\|WP_066030094.1\|3541634_3542729_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NZ_CP012375.1\|WP_103672744.1\|3545725_3546049_+\|type-II-toxin-antitoxin-system-PrlF-family-antitoxin	unknown	unknown	gnl\|CDD\|236638
NZ_CP012375.1\|WP_046663011.1\|3531211_3531946_-\|D-alanyl-D-alanine-carboxypeptidase-family-protein	unknown	unknown	gnl\|CDD\|367124
NZ_CP012375.1\|WP_066030097.1\|3555592_3560938_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350681
NZ_CP012375.1\|WP_046663013.1\|3533567_3534518_+\|prolyl-aminopeptidase	unknown	unknown	gnl\|CDD\|130316
NZ_CP012375.1\|WP_066030093.1\|3540589_3541642_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NZ_CP012375.1\|WP_046663016.1\|3539428_3540361_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379165
NZ_CP012375.1\|WP_103672714.1\|3544967_3545662_+\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|224576
NZ_CP012375.1\|WP_046663023.1\|3561840_3563490_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_066030096.1\|3548313_3551202_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350769
NZ_CP012375.1\|WP_046663827.1\|3544524_3544845_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|367035
NZ_CP012375.1\|WP_158657263.1\|3543830_3544247_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_002754005.1\|3530675_3531020_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_081310291.1\|3551290_3555235_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380293
NZ_CP012375.1\|WP_046663015.1\|3538165_3539179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_071846486.1\|3527759_3528308_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_CP012375.1\|WP_004269039.1\|3563708_3564251_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046660474.1\|3546463_3547960_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_080949779.1\|3536257_3537208_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	5.35977e-40
NZ_CP012375.1\|WP_046663012.1\|3531977_3533369_-\|NAD-dependent-malic-enzyme	gnl\|CDD\|223358	COG0281, SfcA, Malic enzyme [Energy production and conversion].	0
NZ_CP012375.1\|WP_066030094.1\|3541634_3542729_+\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	3.34957e-09
NZ_CP012375.1\|WP_103672744.1\|3545725_3546049_+\|type-II-toxin-antitoxin-system-PrlF-family-antitoxin	gnl\|CDD\|236638	PRK09974, PRK09974, type II toxin-antitoxin system PrlF family antitoxin.	5.31394e-55
NZ_CP012375.1\|WP_046663011.1\|3531211_3531946_-\|D-alanyl-D-alanine-carboxypeptidase-family-protein	gnl\|CDD\|367124	pfam02557, VanY, D-alanyl-D-alanine carboxypeptidase.	2.74612e-58
NZ_CP012375.1\|WP_066030097.1\|3555592_3560938_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|350681	cd17923, DEXHc_Hrq1-like, DEAH-box helicase domain of Hrq1 and similar proteins. Yeast Hrq1, similar to RecQ4, plays a role in DNA inter-strand crosslink (ICL) repair and in telomere maintenance. Hrq1 lacks the Sld2-like domain found in RecQ4. Hrq1 belongs to the type II DEAD box helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.75022e-64
NZ_CP012375.1\|WP_046663013.1\|3533567_3534518_+\|prolyl-aminopeptidase	gnl\|CDD\|130316	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.	9.59131e-156
NZ_CP012375.1\|WP_066030093.1\|3540589_3541642_+\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	1.17127e-21
NZ_CP012375.1\|WP_046663016.1\|3539428_3540361_+\|ATP-binding-protein	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	3.34274e-07
NZ_CP012375.1\|WP_103672714.1\|3544967_3545662_+\|IS1-family-transposase	gnl\|CDD\|224576	COG1662, InsB, Transposase and inactivated derivatives, IS1 family [DNA replication, recombination, and repair].	3.29419e-31
NZ_CP012375.1\|WP_066030096.1\|3548313_3551202_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.4215e-61
NZ_CP012375.1\|WP_046663827.1\|3544524_3544845_+\|TolC-family-protein	gnl\|CDD\|367035	pfam02321, OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.	0.00193739
NZ_CP012375.1\|WP_081310291.1\|3551290_3555235_+\|N-6-DNA-methylase	gnl\|CDD\|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	1.08918e-08
NZ_CP012375.1\|WP_071846486.1\|3527759_3528308_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	2.79444e-05
NZ_CP012375.1\|WP_046660474.1\|3546463_3547960_+\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>NZ_CP012375.1|WP_066030094.1|3541634_3542729_+|ATP-binding-protein
MFNKQQKPLPTAVLQATNSPSDESSPPSGILLGDNCYWNPGHLPNGHIVAIGASGSGKTQTLKAIAYSLRQTYPDIQLFIIDFHGDQEIIGETCYPLHMASSHGINPLIVNLDAEGGGPHLQAIAVTTTLKRSLQLGPNQEGLLLEILQFCYNRRGISQEQPTSWTREAPNFTDLQQEIESRVESGCKESQKLKLKLIATFTYGVFCRPQPNFTEKHIRIDLSKLPPEIGAIAAESLAWQLMNRHRLLGEIEGKLPRTYLFIDEAKELRKSRACDRIIADGRKYGLGLVLASQSERHLSDDVIGNSSTKIVLPVDQSEVKRVAAKFRFAEKKVAELVPLTALCRFGKQAEVTSIFPYHRRVKDG
>NZ_CP012375.1|WP_066030093.1|3540589_3541642_+|metal-dependent-hydrolase
MMSVTHIAFSVALTSITLGTANPEILGIAAVAALLPDVDTGKSSIGRLLFPVSGWLEKRTVHRGITHSFFASGVVTLAAYPLALLGYSQLWYGLILGYFFGWFADVFTKSGVQAFYPGRGRMIIPRNPRLRLATGSNAEWFLLFVLVVVSVMSISINSGGGLIRGFNQVLGLPSGAIETVNEDASRYLLRVRVQGRNAITEQPIDATYEVIEPLTVSDLLVKDEGGTVYRLGSSQESQIIASRIRVERVAPVQVKIENIVLEDEYLDRLANLTEPFGVAQGNRVYLTGTLTIADGSGLSLPSHADRFDTITLQPGHVAYARLTAASPQYVIDKLGEYSVSGHLIARIINV
>NZ_CP012375.1|WP_046663016.1|3539428_3540361_+|ATP-binding-protein
MIERHRRRLANGEERVYTYGVGADGERQSLSIRSVDGSVSISCYRGAEKERVVAALLANASLLVVGEDGAGKTFLAERVIEDLWGRGFPVAAPAIGTVKQMLLEIAGDLGVDTETLEGKPMTAQQLQETIAEWLEGNVAFLVMDNAHRFPVSLRCWLEKLHLQGQPILLLATYPPARDIFLKLPRIELEALPERAIREIMEGEAVSLGLQVTPGKLADWQQRAIGNPMLAKRVVKEEYLGLEGNNYDHTQWIDGTPLLIAVLMCFMILRFLGLGFNNTSLYLIGGILTVAVGMVRLMIYSLPRQSNRLGR
>NZ_CP012375.1|WP_046663015.1|3538165_3539179_-|hypothetical-protein
MPERLLRLDDLKTLTSPDGVAALFHRLGYDAEAQPLNLEDLQLTSRSAEAVYDAYLIADQGNGGLQVLLFQLQPEEWSSPSVASSRMKAIASQVGRRDTEFLLLATKDYNQLMLVNPRKSFDDKMNLKASIRKLLIDRTNPTAYDLDRLEAIAVRDKSPQELYKVQCEAFDVEKLTKSFYRGYKQLFDQVQQAVKLHNDHPYFEDSDRLHQFSQRLLGRIMFLYFLQKKEFLAGDRRFLTTQYKHLRPDPDDTEYYTSVLEPLFFQTLNQQRPNLDSKWGKIPYLNGGLFDRIIIKIKFKPGKRLYLAIDRTQWKDKNLFMVAGIIERRAIDISKNL
>NZ_CP012375.1|WP_080949779.1|3536257_3537208_+|IS630-family-transposase
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKTLHAAEKESDRVQQKRVEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAMLEVTQKDIRNWFTHCCYCTS
>NZ_CP012375.1|WP_046663013.1|3533567_3534518_+|prolyl-aminopeptidase
MTRELYPAINPYCTGYLKVSALHTIYYEEVGNPQGKPVVFLHGGPGGGIEGIYRQYFDPQKWRIVLFDQRGCGKSTPHAELRENNTWLLVADIEKLRELLKIERWVVFGGSWGSTLSLAYSQTHPERCLGLILRGIFLLREKELKWFYQEGTSYIFPDIWQNYLAPIPPEERGDLLAAYYRRLTSDNPQIRLEAAKAWSIWEGSTSKLIPADNLIERFGQDNFAEAFARIECHYFVNKGFLETDNQLIENVDKIRHIPAVIVQGRYDIVCPMISAWELHQAWTEAEFIIVPDAGHSMTEVGIRSALIEATDKFVNL
>NZ_CP012375.1|WP_046663012.1|3531977_3533369_-|NAD-dependent-malic-enzyme
MVHLTPNPSYSLSLKIEIPNQAGTFASVLNAIADVGGNLGQISLIERNLKISTREVMVDAASTDQAEQIIAAVKALPDVKLLKVSDRTFDLHRRGKISIESRIPLTSQDDLAMAYTPGVGRICTAIAHQPELVYSLTIKGNTVAVVTDGSAVLGLGNLGPEAALPVMEGKAMLFKEFAGIDAFPICLATQDPEEIIATVKRIAPVFGGINLEDIGAPRCFEIEKRLRAELNIPVFHDDQHGTAIVSLAALINALKFVKKSLDTVKIVINGAGAAGIAIATLFKTAGATDIILCDSHGILSQQRDDLTPEKQAWAVAASGKLGDALKGADVFLGVSAPGVLTPEMVKGMAKNAIVFAMANPIPEIQPELINDLVAVVATGRSDYPNQINNVLAFPGLFRGALDCRARAITDNMYLEAAKAIASLITPANLDRENIIPSVFDGRVVTAVAAAVQQAARQDGVAGE
>NZ_CP012375.1|WP_046663011.1|3531211_3531946_-|D-alanyl-D-alanine-carboxypeptidase-family-protein
MKPIDDIPEALRDNQYRKTTNPNGLIAIASGLLALVGTGLIAIAVLNRPPASVKKPVINPSPLIKATPSPIENILGHLPYQEAPETELAPITGDGAMRLRKAAAKAFIQMQSDARRSGVILMPISAFRSKATQEKLFFEVKKQRNQQTRKRAEVSAPPGYSEHHTGYAIDIGDGRAPATNLSSSFANTAAFRWLQNNAAQYSFELSFPENNPQGINYEPWHWRFVGDSHSLETFYKAQQLGKQK
>NZ_CP012375.1|WP_002754005.1|3530675_3531020_-|hypothetical-protein
MSKPVEYLTNEQGERVGVLLDWNTYSRFANSLGLDEDCLIGLSVDELKALASCQLSLVEQTRLDDLVTRNAESLLCADEVAELDELLAKTDQLTILKTRARYTLKCLEQGTTAA
>NZ_CP012375.1|WP_071846486.1|3527759_3528308_-|HEAT-repeat-domain-containing-protein
MKLSTESLDLIIRTLAKRLFTDKNPSIRIKAAQSLAKLATEKAIPTLCQALEIEADLNVSFAIMDAIIVISNLQSFNPMSETPKYDLRGANIANFADTVQGDQKAVQHNYATPQNLAEAAQEIQQFISQLTQTYPTNTEIEKQTFVAQVDAKIKKNSQLRNILITGGIELIKILCPPLGIPI
>NZ_CP012375.1|WP_158657263.1|3543830_3544247_+|hypothetical-protein
METEREKAKIQLEIARAALSTAKEKRLQEEYQLALEENRRAITLQNQQLEVEKQRAVRAAQLQEREYNQAVIRTRIQEIDNALVQLATVKAPYPGTVKRLKWQGQDDRLLNVELTVDVDPERSRRVDSPTGRSPSLSR
>NZ_CP012375.1|WP_046663827.1|3544524_3544845_+|TolC-family-protein
MERQRAAKRSQLGEQVLTLVIAYETAGDRERAILAQLSNHDLLTRITEIDYRLGGSSTETYLTRIAQREQLEIQWNRYRLERETAKRQLLSLTGFSTPETTGETTG
>NZ_CP012375.1|WP_103672714.1|3544967_3545662_+|IS1-family-transposase
MQCPECKSTHIRKNGINKQGKQNHICVTCGRQFINNYEKQKGYDEKTKRECLTAYVNGMGFRGIERLKGVHHTTVINWVKSVGELLPVAYDPETIPEVGELDELETFVGSKKTKFWVWTAVDHFKKGILGWVIGDHSSETFRPLWELVKSWGCYFYVSDGWSVYPCFIAEGDHIISKTYMTRVEGENTRLRHYLARLHRKTLCYSKSTEMLGYSIRLLIHYLKFQEVPIPY
>NZ_CP012375.1|WP_103672744.1|3545725_3546049_+|type-II-toxin-antitoxin-system-PrlF-family-antitoxin
MALWPESTLTDRYQTTIPDSVRKALGLNKRDKICYNIQPDGKVWISRADGTEENDPVLGKFLNFLAQDMEQNPQHIQPISSNLVNHVQYLVSGVALDLDAPLLDEDE
>NZ_CP012375.1|WP_046660474.1|3546463_3547960_+|IS5-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>NZ_CP012375.1|WP_066030096.1|3548313_3551202_+|DEAD/DEAH-box-helicase
MLASSRLQASRSNPTGLTSPPTVGSIVRCRNRQWVVLPSEREEVIILRPLSGSEEQICGIYTVLGEKIESATFSPPEPQTLRDHEAGRLLLDAARLSLRSGAGPFRCLGRLSVRPRPYQIVPLLMALRQETVRLLIADDVGIGKTVETALIARELLDRGDIQRIGVLCPPQLCDQWQRELKQKFNIDAVVIRSGTVAKLERELPSGNSHIFSYYRHIIVSLDYAKSDRRRASFLAHRPDLVIVDEAHTATQSKEGANQQRHQLVSKLAENPDQHLILLTATPHNGIETSFLSLLGFLKPEFSTFQLDALSEKQRAELAKHFIQRRRADVQDWMAENTPFSIRKSIEYPYQLSNEYRELFDRVFDFVRGLVRSVDESLSHAQKRGRYWAALAIIRCVMSSPAAAIATLSRQADKNANLDDLAEKTRDESVEDIDRVASPYVYDVTEEELSVDSTPTALVEQSIRTYPDSARKRLRDFARAAEQLTSKKDQKLQYTLKIVKELLTEGYNPILWCRYIATANYYAQALKAEFVGKRGVQPRVIAITGELSEDEREIRLDELKSCPQRVLVATDCLSEGINLQEHFNACCHIDLPFNPNRLEQREGRIDRYGQTTPQLKCILLYGPDNPVDGVVLDVLLRKAVTIHRNLGITVPIPMDSATVQEAIFQSLFERSTTVRQLSLFDSNPALASLHQDWEKAKEKEIQNRTRFAQRSIKPEEVQQELNESDEILGNEADVERFVRNALDRWEISLVKKKVGWQLSRIPDCLEIENRPRTIAFTTPVAEGVEYVGRNHPLVEGLARYLFEEALESSHSIAESSSPPLASRCGVTVTNAIAKPTFILLLRSRLLLTGRNTRPLLAEECLARGFTGTPERPCWLSGTETLALFDTVVPTTDISQEEKREWIEMVIDRLEDLTPSLTEIATERAETLLASHRRVRRFTGEGMLQKVEPQLPMDILGVYILLPP
>NZ_CP012375.1|WP_081310291.1|3551290_3555235_+|N-6-DNA-methylase
MTTEIASGEKDGQSNIHFGLERSIKLEDEIAFVWGEAKDQWQIFQRRLKRLGESDTGTSTTREFWVIPLLKLLGYQPVLQERAETVDGQTFAISHRAGFGDGTGDLSPLESPPVHIVSCKQSLEQRPPSGRPRLSAHALVQEYLNRTEHLWGVVTNGLRWRLLRDCSLMTRLTFIEFDLEQIVQNENYAEFCLFYRLFHRTRLPWGVEDVDSCFLEVYHQDALEQGGRVRERLRDGVEQALLLLGTGFLQHRQNQRLREAINSRELSERDYYRSLLLLIYRLLFLMVAESRNLLLAGEDEGKARIYSEYYSVFRLRALAERKSYLREGFQDNWQGLRVTFSLFDESWRGELLGLSPLNGDLFGSNSLKLLEDLAIDNHDLLLAIRHLSLYENRGQLRRVNYAALDVEELGSVYESLLDFTPRIVNESVSYRFLLVIGSDRKTTGSYYTPPALVGQLIKSALEPVIADKLKGKESPEDKEKALLSLTVCDPACGSGHFLLAAARRIGKELARVRSGEDQPSPEEIGKATRDVIQNCIYGVDLNPLAVDLCKVALWIEGFCKGFPLNFLDHRIKCGNSLVGVMDLDVLKEGIPDEAYKAVTGDDKSLATKLKKSNKEQCKVPKGQLSLFQDIDFEVRQGNYAEGSRDLNRITDSTPSEYHRKQERYEELRADSQWWQDFSACNLWTAAFFMPLTEANLQLIPTTEALRRLLREAEQRQQRNPLQGSLFADGETSSSTPFSVTRIVEAANNLAREQRFFHWCLEFPEVFAEGGFSCVLGNPPWELLQIAEKEFFASKDESIANEKDSSKRKKIIQQLVKTNPRLLQVFEDTKHNADAQNKFIRESGRFLLTTRGKINTYSVFTELAKNLMSSQGKSAVIIKSGIATDESNKDFIQNVVNNCLVTSFFDFTNKEFIFKDVKDTVSFSILTLSNTPCSHVYFASQLRNLNQLKNPLKLYGLSSDEIRLFNPNTLNLPIFQSIEDLKLVRKIYQKVPVLSNLKKKENHWKAFFRQGLFNMTSEREIFWIESELITNNFNLKRNVYFKENIIYLPLYESKNTDQYNHRFAGFEGIKEEERYRNRPPINEANQQQLANVTWQITPRYWVQNQSVDLKIPEQWKYNWLIGFRNAINAFADSRSVRFTLIPKCGVGNSMPLIFSEEKPKMLCCLVANFNSLILDYVAKQKASGGNLNFYVVKQLPIIPPNWYTSEDIEYISDRVLELVYTAYDIRPFAEDMGYYGEPFIWDEDRRAKLRAELDAKYAKLYGLTRDELRYILDPADVYGEDFPSETFRVLKNNEMKKYGEYRTRRLVLEAWDSMK
>NZ_CP012375.1|WP_066030097.1|3555592_3560938_+|DEAD/DEAH-box-helicase
MILKDLLAGGIPAITATSTFIGMGMLPQKLNANGVDTLTEEQIEALFSNIPADWSFSDLAERVFDESTVSESLADRLIAYIDQKHGGEPLTPEPRESSQPEEDRPQKFDIFTLRDEIVEDYRGYIESFLSIKDKRIKEFVNRELDRGQLWKDPLVQLNPPYKRGATVGQLIGRGILHQDCDRYFPNFTFFEHQETAFQLARQNLPYVVTTGTGSGKSLTYVVPIINDILENPTLQGVRAILVYPMNALINSQEEEFKKFLENIPDSPIKVAKYTGQESLTEKAEIQNNPPHILLTNYVMLELMLTRVHEDKLVASPDLKFLVLDELHTYRGRQGADVALVIRKLKRRCGKSLVCIGTSATMSTEGDRADRKRTVAEVASKLFGVEIPPNRVIDETLERAISRPDPTVAELQQSLQQEVSPEEEQTDEAFQQHPLVAWIEMNLGLEEEDGYLKRRTPISLKEAADQLAKLTKIDTGVCLDRLREMLLWSGRLNASKTKNSREVRGLPFRLHQFISQGGSVYATIEPHERRELTLEGQYRTTRDRLLFPIVFCRECGHDYYVVRYDSEKYQITPLIPTAIDEENDKDITEGYLTLDEPDLWDINDEERLPDTWFNLNKSGRKVKKDFAKFIPRELYVYPDGRIVTGAFSTDDPIQPVRCWFIPKPFLTCLNCGVVYDRKTTEYRKLSRLSSEGRSTATTLLCLSTVNRLKLNLNIQETAAKILSFTDNRQDASLQAGHFNDFVQTSFLRGSLNRALQNHGYLTHAELAAKVVNAMGLTQEQYAEQPVTFGTGKTRNEKAFEDLIQYRLYDDLKRGWRIVQPNLEQSGLLAIEYPDLENNCQNLAPWQKYPHPVLVSATPEQRLKAASFLLDHLRKNLALDADLLQSNRLNELQRRVNQALNQAWKFDDHEYLPPATKASHLNNPRSGATVKLTAKSKVGKYLRSEQLWGHKVTEAEYESLIVSLINALADSGYLKREGTEIQLRVDSMVWKAQKVDRVKLDPTVRKLRDSLLEEREVNAYFQNFYDRQATTIRKMEGREHTGQVANDKRQEREEKFRKGELAALFCSPTMELGIDISDLSIVHLRNVPPSPANYAQRSGRAGRGGQEALVITYAAYGNGHDQYFYNRQAQMVSGVVVPPKLELANPDLVKSHLYSLWLSYTGVDLGNSMNQILDLEKDGYPIKDGIWQQLKLSSNKLNLCWDDARTILGDVYCQGDLAQTNWYSADWLKQTLENASDEFHNTCNRWRRLYREATEQLQKARETIDRAVRGGVTDEEKKKANVSEEDAKRQRDLLVGSDRKGRSQSEFEFYPYRYFASEGFLPGFNFPRLPVRGFIPAGNKGEFISRPRAVAIRELAPRNIIYYEGSKFQIARTRISPQGEQQFRRISACSRCGYFHADTEANRDTCENCGARLQDRLYHVLVLDTMITRRRERITCDEEDRLKYGYILTTHFRYDSHKRRKALVTAADSTELLKISYGETASIRRINRGLRFNQERGFRLDTAKGEWLDAKQDNPSSNSQAGISLMVEDTRNILVVEPCWGKADLAPEFLITFQHALARAIQAHYKLEAEELASEKLGEGGYILFWESAEGGAGVLAQILDNPTSFQNLAQQALDICHFKQDKPDCAQACYECLLSYQNQFDHPYLNRHLIKDFLEQLAGSRLSFSQEGDREQSYQILLQQSDPNSEYEKVVLKAIYEQGLPLPDRAGVYIPDADCKPDFIYENLKIAIFCDGSVHDHRDQQEQDRVKRENLKWHARYKVFSFNYQSDLQEQIDKLQAMLSPT
>NZ_CP012375.1|WP_046663023.1|3561840_3563490_+|hypothetical-protein
MSNVKIRLNFTTNLFTGILITFGIAISGIISQNSAVMATNIDNRITPNLSKTTKKTVAICIFGFCVDTPSLPTQIQNTIEQGASSIILQQFRSFLSNEIPISGTEHKLYPVTYSLFGEAFLPSKLYLNHFKDSHFIQSGDYQIPAHFYCTHVYTFNGSGNRYRLAKINGKMSQALSALYKRASLSEVPVQDIQKLSWSIQTGVSYHKLPESSQILVDQLIPEYRQNMNDSFMTNTINFYDNLSRQFSLPSLDKFLSNLGEIGTLVKALLRAREQVINTRLDYSTLANSFVIQQNLNLMGGIESTPWSQVNEQLYLRLIAPQGAMNDGIIQVRILRTNKQSKKVTSHRLFAMNTDINSFKLLTVNDNSVSSLPTAGELRNIISQLIGIPEANGHQAITASILSPPEIMSRTDRLGALQATKEFKPGTVGYGVYKAIEALYYGNEFLGGYGAFANKYSAEIGAFFQRSDIQELMKQPINSQANLLVAKAEFDYWTFVQNNPRSTAEDKEGARIALKFSPEVRAKLQVYYANGDYTRANLLIIKNYPGIIFH
>NZ_CP012375.1|WP_004269039.1|3563708_3564251_+|hypothetical-protein
MTSLKKIVNLLNCFLCLNLLNLIAYKPMLGQLFIASPILKNSDDKQILEEPKLVLTRNKKYAEYEGQLVAPGHGNQNYKIIRIDTTNFITGGTLRIDIQVGSGQSQASFDLFAEDAVIPIAGRPQQSLAGAYDISPDSGTSLTYKFDKGEVFQFGATGNWFSPKGSRNSYRIKAYVIPKI

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Crispr_ID: NZ_CP012375_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_19

3600592-3600774

Unclear

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRISPRCasFinder

2 spacers

cas2,cas1,cas4,cas6,cas3,cas5

The CRISPR arrays of NZ_CP012375_19

>merge|NZ_CP012375|19|3600592-3600774|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGAATATTGGATTGTTGAGGGGTAATTATGGCTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACGTCTCCGGGTCAACCCCGGAAGTGTCACGGTACGCTGTTTCAATCCCTAATAGGGTTTAAGATTAATGGTTCT

>NZ_CP012375|19|18|3600592-3600774|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGAATATTGGATTGTTGAGGGGTAATTATGGCTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGTCTCCGGGTCAACCCCGGAAGTGTCACGGTACGCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATGGTTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046663835.1\|3586570_3588274_-\|solute-carrier-26-family-protein	unknown	unknown	gnl\|CDD\|273284
NZ_CP012375.1\|WP_046663046.1\|3594657_3596811_+\|O-linked-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_080949780.1\|3593835_3594318_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|379187
NZ_CP012375.1\|WP_046663053.1\|3615618_3616452_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_CP012375.1\|WP_046663042.1\|3590683_3590926_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224246
NZ_CP012375.1\|WP_046663045.1\|3592745_3593807_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP012375.1\|WP_046663041.1\|3588573_3590538_-\|flavin-dependent-dehydrogenase	unknown	unknown	gnl\|CDD\|223717
NZ_CP012375.1\|WP_046663047.1\|3596828_3598994_+\|O-linked-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_103672725.1\|3599578_3600471_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP012375.1\|WP_046663050.1\|3613727_3614000_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP012375.1\|WP_046663043.1\|3590933_3591749_+\|DUF2993-domain-containing-protein	unknown	unknown	gnl\|CDD\|378597
NZ_CP012375.1\|WP_046661002.1\|3600794_3602021_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP012375.1\|WP_046663055.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012375.1\|WP_046663054.1\|3616451_3617018_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_066030107.1\|3615022_3615616_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_CP012375.1\|WP_066030106.1\|3614012_3615017_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_CP012375.1\|WP_046663056.1\|3619786_3620611_-\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663040.1\|3584736_3586131_-\|DUF2252-domain-containing-protein	unknown	unknown	gnl\|CDD\|313268
NZ_CP012375.1\|WP_046660474.1\|3610024_3611521_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319
NZ_CP012375.1\|WP_046660896.1\|3607916_3609065_-\|IS4-family-transposase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046663835.1\|3586570_3588274_-\|solute-carrier-26-family-protein	gnl\|CDD\|273284	TIGR00815, Sulfate_transporter, high affinity sulphate transporter 1. The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions].	7.97668e-158
NZ_CP012375.1\|WP_046663046.1\|3594657_3596811_+\|O-linked-N-acetylglucosamine-transferase	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.2671e-152
NZ_CP012375.1\|WP_080949780.1\|3593835_3594318_+\|cytochrome-c	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	3.50185e-08
NZ_CP012375.1\|WP_046663053.1\|3615618_3616452_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.28864e-45
NZ_CP012375.1\|WP_046663042.1\|3590683_3590926_+\|hypothetical-protein	gnl\|CDD\|224246	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription].	0.00107048
NZ_CP012375.1\|WP_046663045.1\|3592745_3593807_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	4.78128e-37
NZ_CP012375.1\|WP_046663041.1\|3588573_3590538_-\|flavin-dependent-dehydrogenase	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	3.48037e-13
NZ_CP012375.1\|WP_046663047.1\|3596828_3598994_+\|O-linked-N-acetylglucosamine-transferase	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.38343e-162
NZ_CP012375.1\|WP_103672725.1\|3599578_3600471_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.69658e-40
NZ_CP012375.1\|WP_046663050.1\|3613727_3614000_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.25525e-37
NZ_CP012375.1\|WP_046663043.1\|3590933_3591749_+\|DUF2993-domain-containing-protein	gnl\|CDD\|378597	pfam11209, DUF2993, Protein of unknown function (DUF2993). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.67573e-22
NZ_CP012375.1\|WP_046661002.1\|3600794_3602021_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80
NZ_CP012375.1\|WP_046663055.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.32697e-43
NZ_CP012375.1\|WP_046663054.1\|3616451_3617018_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.55985e-27
NZ_CP012375.1\|WP_066030107.1\|3615022_3615616_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.46773e-53
NZ_CP012375.1\|WP_066030106.1\|3614012_3615017_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	9.27882e-142
NZ_CP012375.1\|WP_046663040.1\|3584736_3586131_-\|DUF2252-domain-containing-protein	gnl\|CDD\|313268	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.	0
NZ_CP012375.1\|WP_046660474.1\|3610024_3611521_+\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>NZ_CP012375.1|WP_103672725.1|3599578_3600471_+|IS630-family-transposase
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKTLHAAEKESDRVQQKRVEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>NZ_CP012375.1|WP_046663047.1|3596828_3598994_+|O-linked-N-acetylglucosamine-transferase
MSWQNEVKTALENNQYDIVSQFYEELIERETTEISHYWYLGLAYLLEDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLRVTEKVLIYPCTDTIHFLELAALHINNPEIIATKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTIDYKKSLEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRTRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDLDSLTNNTTCLVIALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNSKQFTRNLETAYQQMWNIYCQS
>NZ_CP012375.1|WP_046663046.1|3594657_3596811_+|O-linked-N-acetylglucosamine-transferase
MSWHSQVEPAIIQGDFWQVSQFYEELIEREPLEISHYWYLGLAYLLEAREEEAQTTWLFVLSQGDEQEMNSWTVDLVNILDGEARRQVEVKNWQLSWVIRQHIYQINPDNLENLLYLVLLEIKLEYFYPQKLKDWQIVDLINSDKLENFDINLLLHTIYKLLDWPAQEVLDIIITLLKIDSQQSAILEIIEQHIEKIYYTDKTNAVILTLSCLDIIPDHLVLLHKIHQYYIDTGNFELALETANKIKNLSNDKAAKLYGIYLLLYTEILAGNWLNIDNKTQEYYQAIQNNLERGQCPMSNQAEVISITSPLAYLKDDLVGNRWLTNQLAKLFQEAVRKRFNQVTIESQKPKDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKVDKYNNLPANPQIIAEKINQDNIDILVDLDSITKDNTCRVMALKPAPIQITWLGLDATGIPAIDYFLVDNLVLEKNAQEFYQEKLWRLPNCYLAVDGFEIGIPTLTRQDLNIPADAITYLTLQVGLKRNPATIRLQMQIIKAVPNSYLLIKGAGSEKLINDLFISIAKEEGIDENRLRFLSGVANEEIHRANLQIADVVLDTYPYSGATTTLETLWMGIPVVTKVGQQWSSRNSYTFMTHGGISEGIAWSDEEYVQWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKDVENAYRQMWQIYCES
>NZ_CP012375.1|WP_080949780.1|3593835_3594318_+|cytochrome-c
MSYIILHLPISSSGGGILGQKVAKCKEKLIFPSAACVNSQLVKPKFGLYRFLMVIIVVLFLISTFLITFHLAKMSDPYIKEVLSRQGNVSRGYEIFQINCAACHGQFADGIVGPSLEDVSRRKSRISLIEQVISGKTPPMPKFQPDTQAMADLLVYLENL
>NZ_CP012375.1|WP_046663045.1|3592745_3593807_-|mechanosensitive-ion-channel-family-protein
MNLLTRLEDWPYIILPITIVLSFLLLGWLVEQRVVSQLLSIAREKNLRFSEGVLRSLRGLSILWFGLLGLNIALSLPNLPLFPSLILLSQKFLLVAFLASATWAIAQLSVEILRVYTTGDDGISSLTSLFEFLAKVLIFSCGFLLILSSVGISITPLLTAFGIGGVSLGLALQNTLANLMSGINIITSKKVRPGDYIELRTGEAGYVRDVDLRCTVVEEITNNLLVIPNAQIISSSFRNYSLPDHSLLVPVEVGISYDSDLEKVEKITREVIQEITQLLQPNLGDYQPLIRYGKFDYYSILLTVYLKVVEEEFFQHLTIKHEFIKLLHRRYQQEGIKIPYPIFFPYPPTNPPS
>NZ_CP012375.1|WP_046663043.1|3590933_3591749_+|DUF2993-domain-containing-protein
MEWLTITLASVLTLLTPAGAIIDRVLADILRSQVQKVEQLAVRVDNTPNYQALQGKIDRVRISARGIYPLADVRIEKIELETEPISLDLRRLQQKNGNLAASLRRPAAGALHLVLTETNVNQALQSAAVKGPIQTLINNLIPSREEFGITKYQFSQANFNFLNNNRVALRLQLETQRLDEPAASLDLSLEVGFKLVQGRKIELIDPTATLNGRRLSSRLLKGFAEGISTQLDLKNFEKQGIIARLLQLQIDDDKLSIAAFGRIEPRSGNPN
>NZ_CP012375.1|WP_046663042.1|3590683_3590926_+|hypothetical-protein
MNYPIPTTPEEIAALRQRPVDEEMIAAVIAGIIRMARAQGQSLNDLTEEILAEDQVLDQVQRRWLSQLLTNAWQNLAEWV
>NZ_CP012375.1|WP_046663041.1|3588573_3590538_-|flavin-dependent-dehydrogenase
MREILYREIPTPDSSAVCQWLQSDWQPASGVKTNTPNGVRLRLSEALELSIFVWTLQRTTYLKVFRWGERSHYLETSLTRQLDRALQKRFPPQYTTIPNIDQKNQSIFTALEADYPLTVHYFRKMPQGEADLERLYWWEKRWRDSAKNPQQPQPVIFSSSEENDHPIAYDLIYIGGALGAIHAAQMAKLGYRVLLVERLPFGRMNREWNISRSEFQSLINLGLFTAEEFEELIFQEYLDGFNKFFDGNNPPHLKAKILHTPTVLNIAINSDKLLQSCGKKLQDHGGKILDQTEFIKANITANSVTVTLNHSGEIQQIKGRLLIDAMGSASPIAWQLNGVRAFDSVCPTVGAVVEGFEPVVWDSHYGDVLNSHGDISKGRQLIWELFPGEGKELTFYLFHYHQVHPDNPGSLLEMYEDFFTILPEYRQCDPEKLTWKKPTFGYIPGHFSTGKKDRIVSFDRILAIGDAASLQSPLIFTGFGSLVRNLERLTDLLDMALKHNLLTAKDLENVRAYQSNVAVTWLFSKGMMVPTGKTLPPQRINAMLNTFFGLLADEPPEVSETFIKDKTDWLTFSRLAIKAARKNPALLLWIAEMAGSQDLIRWLGSYLDFSLDGVKNLFFGSWFPQWLKNSQSWLEKDNPRLWLKLLSFNYGLRN
>NZ_CP012375.1|WP_046663835.1|3586570_3588274_-|solute-carrier-26-family-protein
MVTRLNFSSEQFSLPGLKRLRSYRSAWLRGDIIAGITVAAYLVPQCLAYAELAGVQPIAGLWAILPPMLIYALLGSSPQLSVGPESTTAVMTAAAIMPLVAGDSSNYASLCSLLALLVGSVCCLAAFAQLGFLADLLSKPILVGYMAGVAVIMIVGQLGKISGMSLKAESLFGQIGEFSRHLSEIHPPTLILAAGVLIFLLLVQRRFPNAPGPLLAVLLATSAVYLFHLNERGIAVIGEIPAGLPSLKVPRGFSPQQFVYLLSSAIGIALVGYSDNVLTARAFGAKNDYRIDGNQELLALGALNIGNGIMQGFPVSSSGSRTAIGDSLGSRSQLFSLVAFLIVILVLLFLRPLLSLFPKAALGAIVIYAALRLIEISEFNRLRCFKTSEFRLALVTMFGVLATDILVGVGVAVGLSVVDLFTRLMRPHDAVLGEVPNLAGLHDIEDWQGATTIPGLVLYRYDAPLCFANAENFRKRAIAAIEAEQVPVEWFVLNAEAILDIDITAVDMLKELHRELIGRGITFAMARVKQDLYQQLKKGDLSETISTERIYPTLEEAIEAFHRKFWV
>NZ_CP012375.1|WP_046663040.1|3584736_3586131_-|DUF2252-domain-containing-protein
MNHQIETPIRSTSQARFRSREERIQMGKSLRERLPRSSHAIWQPPAAGREPIEIIEASNRGRLQELIPIRYGRMLRSPFTFLRGSAALMAYDLATTPKTDIIVQACGDCHLLNFGFFATPERNLVFDINDFDETLPAPWEWDLKRLVVSFVIAGRDSDLSDRESKAAAIDCARSYREHLREYSRLSPLEVWYTRIGVEQVLEMAPDEKTRKIREQMMTKARERIIEHLYPKIVTQSGGRNRFVDQPPILYHVNEPDWETLVREGLEDYRQSLPEERRVLFDRYQLEDFALKVVGIGSVGTRCYIALLFSEDNHPLILQVKEACPSVLEPYTAKSQYENQGQRVVTGQRLMQSSSDIFLGWTRGRGGNNFYLRQLRDMKFSLPIEGVSAVQLQRYAEFCGWTLARAHAKSGDAATISGYLGKGDQFDLALGEFAIAYAEQTEQDHAALVEAVKTGRVEALVEENL
>NZ_CP012375.1|WP_046661002.1|3600794_3602021_-|ISL3-family-transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>NZ_CP012375.1|WP_046660896.1|3607916_3609065_-|IS4-family-transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>NZ_CP012375.1|WP_046660474.1|3610024_3611521_+|IS5-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>NZ_CP012375.1|WP_046663050.1|3613727_3614000_-|CRISPR-associated-endonuclease-Cas2
MYFVISYDISDDKRRTKIHNTLKSYGQRVQYSVFECDLTDTQYAKLRGRLSKLIKPDTDSIRFYFLCACCRGKVERIGGELPRDNTIFFV
>NZ_CP012375.1|WP_066030106.1|3614012_3615017_-|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTVYVTREDAFLGKNDERLTVKASKETILDVPLLNVEGVVLFGRGSLSPALVIELLERHIPLSFVTVTGKYLGRLEPEMTKNIFVRRAQWQAAGDSPKAIHLVRGFVRGKLKNYRNILLRRQRDRKELDLQTAIACLEAAIGSIETTSAIDSLRGLEGAGSAAYFSCFDSLILGDTFTFASRNRRPPRDPVNSLLSLGYALLRHDVQSAINLVGFDPYLGYLHYQRYGRPSLALDLMEEFRAIVVDAVVLNGVNHPYLTPEHFTTEPLSGAVSLTREGLQIFLRLYEQKKQSKFKHPVMSKQCTYQEAFEIQARLMAKYLMDETDKYPPLILK
>NZ_CP012375.1|WP_066030107.1|3615022_3615616_-|CRISPR-associated-protein-Cas4
MDESDYIPIAALNHYAYCPHRCWRMFVAGEFLNNSYTIEGTNLHERVHTVGAGNREEIWQIRAIWLKSDNYRLIGKADLIESHDGEFIPVEYKRGSKGEWDNDELQVCAQAICLEEMTGKKLDTGYIYYASSHQRQPVAIDLALRQRAIATIRAIETLIQTGKMPLAVYSPRCKGCSLFDRCLPRLTEKVQRYQEED
>NZ_CP012375.1|WP_046663053.1|3615618_3616452_-|CRISPR-associated-endoribonuclease-Cas6
MPYSLVLNLTPRSPIYPNFLTGRHLHALFLTLVSSVDQELGNILHASDADKAFTLSPLQMQSRRKTINFPRWRHEREIAPETPCWWRISLLDDRLFGKLTPLWLNLNPKQPWHLGSADLVITSVLATPQSVQPWANSCTYQYLYENASETNREFDFLFATPVTFRQGKFDSALPTRELVFNSLLSRWNRYSGISFDSIALESIFPSFFDIQTKLTDEAYKNQSIGCVGEIHYRLLGEVEPAKIKAINALADFALYAGVGRKTTMGMGMTRRISKDKR
>NZ_CP012375.1|WP_046663054.1|3616451_3617018_-|Uma2-family-endonuclease
MTLISSKSLTLPEFLSLTPPDGDITYELVDGEAIPKMSPKFFHSRLTGALFLLLDRWNQGRGEVGIEWAIVLSKNDRDWCPVPDLLYISPERLGDITLTDEACPVPPELVIEIISPEQSFSSLSEKAVDYLKAGVSRVWIVDPQAKQITIFYPDAPPAIKKGDDEMSDILLPDLTLTPGQIFAKARLS
>NZ_CP012375.1|WP_046663055.1|3617058_3619794_-|CRISPR-associated-helicase-Cas3'
MSKSNPQPFFKFGRVFFPGEPTIAPDKILFQPLGNHVGNVRQLARKWQDGNFSLERVIEGINLHDKAKPQTFKIRVETNKQGEFTKYTYSFKGHRFKVDNPQNLWVQALARGHHDYSTKEIIKDTYQLKKDTEYQKIFSKDPLQYAKELYILEMCDQIEAELACRVIGDDEQAKSRTFMDFTITKGTSEDSNHRVFYLDPYPFKEPTITLNFRSWTYNLSDEDKNQLQQLHENRKDKELGSKLNTLVKEWWKKNEHTISEDRAITAIIKPDNSNTYSPSEKSENAIFWWYEELANFQPNPMQEEVFQTMVKNQHPAFILKAPTGAGKFEAIIIPFLAMLSTKEDRPRLIIPLPARSLLEDQKQRCDKYLKQFSLLHKGREVSLVIDTGTEMNRYVYLDGEVKSSNNSRRHLYKGDIILTTIDKFIYRYFGYGDKQKSFIFPYRIYHGNTLICFDEAHTYDDISFTNFCSLVKALYEAGCSLVLMTATLSQNHLERFDYLADNMIDYIDVQDNLEKLNNFYQQILKQDYSNLKQFEFYEEPTNLQQKLTSIALEEWNSNPSHRIIVSVETVKDAIAIYEKIKQTLNIKFSEKKEFLFLYHGRLSDIPKTSHYSRTNLYQRLKERDENDQAYILVTTSAIEVGCDLNSTRLITQLCNPESLIQRAGRCNRKGNVEDAKIIVIGNNIPEFVNTLSEAELENYKTILKGLHDQNFDPKAIMNCVSTKQTIDDYRVVELFSLLQDYVYNADLTCQSAHEKGLVITRSWTPSVTLVYDDGKQGDSLEKIVKESPQIQVSIDRLILKKNNEGNYTNQYANVSVYEWIYDKEETRYKLEPLKYWGCAYSKELVIKVCAVQEGAISDSFEPYSYDHELGFKDLPGVFIKWRSNGYQERLQYNPTKDRSVVINYTSALTQD
>NZ_CP012375.1|WP_046663056.1|3619786_3620611_-|hypothetical-protein
MYCLTFKIIPTAAMTFRILPGSILNIATYPFVPPTTFSGFLRRIVMLSEGLDIPETSINKENPPYFTLPRQYIALGAYPVLDKWSGVHRTHRKGTRSFNHDVFSRLYIDGDRENFQLHTWEYFIAEELIGYVVSESKSSLEAFSNLQGVGCKIGKEGFAVIDEVSESIRLQRKILSAHPSTVVPMEALIQRNPCINRCDIYNLYRHEWSADQTQDEDKGLFDTERSPINGFIPFVAAYYPEKAHPLPTLDFYTDGNLQIPVALVELLQRESINV

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Crispr_ID: NZ_CP012375_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_20

3602218-3607858

Unclear

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRT

78 spacers

cas2,cas1,cas4,cas6,cas3,cas5,cas7

The CRISPR arrays of NZ_CP012375_20

>merge|NZ_CP012375|20|3602218-3607858|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAATTCAGGGTATTTTGGCTTAAATCCCCAAAATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAGGGTGTAAAGAGTCGATACATAGCACATATCCCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACGGTTCAACCGACCTAAAACAACTATTAGCAGGGGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTTTTCGGCTATTTTTAGCCCAATTCTGTAGGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGTGGAATTAATGCTTAAAAATACTGCTGAATTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGGTAACTGACTAGGGACGGTATCAGGCGAATTAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGGAACACTCAAGGATGCCCTAATCTCGTTGTTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTATTTCTAGAGATTTTAGGGTAATTTCTAGGATCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACCCCGCAGCACTCGGATCGATTTACGATTACCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTGTATCGTGCCGTCGATTTCATCCCCATAGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCCGTTGCCAGTCAGGTCTGTCGCGCCTGAAACTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAATCAGCAAAGTGTTAAGGCTAGAATGGCGCGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTTGTTTTATTTGGTATCCACTCGATAATATCGTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTTCTTTTTCTTTCGATTGGGGCCGGGAGTGTCTAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCGGGACGGACGGTTATCTACTCAAGCTATCTATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGATCGCCGCGTCGATCTTTTCCTCGAAGTTGGGCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGGATCCGAGTCGGTACGACTGCCAGAAAACTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGTGAGGGTCATCCCTACTACGCGCCCGTTAAGGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTGGGAAAATACCATTATGTTTGGTGATGAAGTCGATGGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTTGATACTGCAATTATACCTATTTGTGATTATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTATAGACGTTCCGCGAATACTACTTTAGCCCGTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAAGTCCATCAACACATATATGTGTTGATTTTCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAAAGGCCAGGATTTTACCCTATCTGTACTCGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACTTTATACAAGATACTTATACATACTTTATACAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGAGGGTCGCTGGTAATATAAAATAAATCCGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATAATTTAGAAGACTCGATCGATATCCAATCGCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATCTAACTGTGACACTTTGAGAATTGGCACTCGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGAATGATGATGCTTCTTTTCTGTTTTTAGCCTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCAGGTCTAATAATTCAAGCCCTGTCTCGTTAAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGAAAAAGGGGTGAACCCGAAGGTAACTCGTGGGATTTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAACCTACTCTTTCCATATTTCTTCTCAAGCTGGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGAATTTTTTCGAGATTGGGAGAAATAGGAAGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTTCCTCTGATGAGGAAGCGGTGGTTTTTTATGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCAGGATCAAAAGAATTGGGATTAAGATGTAAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATCAATCAAGAAACTCAAGAAAGCAATCAAGAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAGGTGAGATGCTGAAAAATAAACCCGTCTCTATCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATTGTTCCCGTTGCCGGTCAAGTCTTTTGCCCCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTGCTAATTTAGCGACTCCTTTAAATGGTATCGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCGGTAGCAATTAGAACTTTACTAGAATCCTCTTTAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCAGTACACCGGCGATTATATCATTTACAGAATTGTCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGTACAAATAAAAGATTATGTAACTTTTATTAGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCGTTTTTAACGGTTTTGGGTTTCGTATCCTGATCGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAAAAAACCATTATTTAGAAGCAAGAAAAAATGCCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTTTACCAGACCGGCATAATTCAAGGAATTGGCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATTGGGTGCGATACCCGTATCCTTGATAAATCGGTAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTACCCTGGAATCATCGGGATTTGAAATCAAAGGCGGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGGTTCAACCGACCTAAAACAACTATTAGCAGGGGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGGATAGTTTACATCGCTTTTATCTATCAGAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATGGTGTTTTTTGTAGTCCATATTTTGATATTTCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGAAAAAGAATTTGAGAGAAATAAGAGAAGATTTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTATCAGAAAAACTGTTTTATCTGTTGCCACTAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTGTATAGTGTCAAGAGTTTTATTCTAAGTAGTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATTAATACTATCTTCTCTATTTCTTTTTGAATTTTGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTGTTTTTTGCTTGCCAGACCTTAATGCAACTGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTCATGGCACGTCAAACTATTTATTAAGCAATGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTTATTAGATTTTTTTTGTGCTATCATAGTAGAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTCGCTGGTTTCCTTTAGTTTTTTGATGTTTTCCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCCCCCTTCCCCCTCCGGCCCGACCGGCGATCGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGCATTAAAGGGGGATAAGGTTATCCCCCCAGCGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATGGCGCGGCCGATGATGCTTTTTCCTTCCCCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAACATAAAATTCCCATCGGTTCCATCTTCTACTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTATTCCCGTCGCTATGTGATTAAGAACAGTCCCTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAATCAGGAAACTGTAGAGACTGACTCAATAGATGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCGAAAAAGAATTTGAGAGAAATAAAAGAAGATTTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGCATTGACTCGATTTGTTCATACTTAAAATCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTTTGATATTGAAAATAAGGATAATAATTGTTATCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTCTGAAAGTCTTGCTAGAAGCAAGTTTCAAAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACGCTACCTACTGCATAACCCAGATACCCTAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCTCTTTATGAAGGGGAATCGGGCATCTTAATCAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTCCGTCCTCTACTGACTGTTTAAAAGTGTCACTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTGGAACGACCGATTACCTCTCTCTCATGAAACCTTACGGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCCACTGATAACGATAGAATTAATATCATCTAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGCAATGGCTTTAATATGTGGGCATTCAAGCCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGCGATCGCATGGCTGATCGTCTAAATCGGACTATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGCCCATCAAACATTGTTTGCTGGCGGTTTTATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTCTCAGAATAATGTGGCGGGTGCGGTCAATCTTCTTCAACGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTGATAGTCTGATCCTGGTACAATATCATTAGTCACGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTGACTAACGTGATTGCGTTAGGCAATGTCCCTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACT

>NZ_CP012375|20|3|3602218-3607857|PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTCAGGGTATTTTGGCTTAAATCCCCAAAATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGGTGTAAAGAGTCGATACATAGCACATATCCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTTCGGCTATTTTTAGCCCAATTCTGTAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGGAATTAATGCTTAAAAATACTGCTGAATTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGGTAACTGACTAGGGACGGTATCAGGCGAATTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGAACACTCAAGGATGCCCTAATCTCGTTGTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTTCTAGAGATTTTAGGGTAATTTCTAGGATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACCCCGCAGCACTCGGATCGATTTACGATTACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTATCGTGCCGTCGATTTCATCCCCATAGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCGTTGCCAGTCAGGTCTGTCGCGCCTGAAACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGCAAAGTGTTAAGGCTAGAATGGCGCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTGTTTTATTTGGTATCCACTCGATAATATCGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCTTTTTCTTTCGATTGGGGCCGGGAGTGTCTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCGGGACGGACGGTTATCTACTCAAGCTATCTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGATCGCCGCGTCGATCTTTTCCTCGAAGTTGGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGATCCGAGTCGGTACGACTGCCAGAAAACTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTGAGGGTCATCCCTACTACGCGCCCGTTAAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGGAAAATACCATTATGTTTGGTGATGAAGTCGATGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTGATACTGCAATTATACCTATTTGTGATTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATAGACGTTCCGCGAATACTACTTTAGCCCGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAGTCCATCAACACATATATGTGTTGATTTTCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGGCCAGGATTTTACCCTATCTGTACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTTTATACAAGATACTTATACATACTTTATACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAGGGTCGCTGGTAATATAAAATAAATCCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATAATTTAGAAGACTCGATCGATATCCAATCGCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCTAACTGTGACACTTTGAGAATTGGCACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATGATGATGCTTCTTTTCTGTTTTTAGCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGGTCTAATAATTCAAGCCCTGTCTCGTTAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGGGGTGAACCCGAAGGTAACTCGTGGGATTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACCTACTCTTTCCATATTTCTTCTCAAGCTGGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATTTTTTCGAGATTGGGAGAAATAGGAAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTCCTCTGATGAGGAAGCGGTGGTTTTTTATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCAGGATCAAAAGAATTGGGATTAAGATGTAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCAATCAAGAAACTCAAGAAAGCAATCAAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGTGAGATGCTGAAAAATAAACCCGTCTCTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGTTCCCGTTGCCGGTCAAGTCTTTTGCCCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGCTAATTTAGCGACTCCTTTAAATGGTATCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGGTAGCAATTAGAACTTTACTAGAATCCTCTTTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGTACACCGGCGATTATATCATTTACAGAATTGTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTACAAATAAAAGATTATGTAACTTTTATTAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTTTTAACGGTTTTGGGTTTCGTATCCTGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAAAAAACCATTATTTAGAAGCAAGAAAAAATGCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTTACCAGACCGGCATAATTCAAGGAATTGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGGGTGCGATACCCGTATCCTTGATAAATCGGTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TACCCTGGAATCATCGGGATTTGAAATCAAAGGCGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGGATAGTTTACATCGCTTTTATCTATCAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGTGTTTTTTGTAGTCCATATTTTGATATTTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGAATTTGAGAGAAATAAGAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTATCAGAAAAACTGTTTTATCTGTTGCCACTAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGTATAGTGTCAAGAGTTTTATTCTAAGTAGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTAATACTATCTTCTCTATTTCTTTTTGAATTTTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTTTTTTGCTTGCCAGACCTTAATGCAACTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTCATGGCACGTCAAACTATTTATTAAGCAATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTATTAGATTTTTTTTGTGCTATCATAGTAGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCGCTGGTTTCCTTTAGTTTTTTGATGTTTTCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCCCCTTCCCCCTCCGGCCCGACCGGCGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCATTAAAGGGGGATAAGGTTATCCCCCCAGCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGCGCGGCCGATGATGCTTTTTCCTTCCCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACATAAAATTCCCATCGGTTCCATCTTCTACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTCCCGTCGCTATGTGATTAAGAACAGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGGAAACTGTAGAGACTGACTCAATAGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAAAAAGAATTTGAGAGAAATAAAAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCATTGACTCGATTTGTTCATACTTAAAATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTGATATTGAAAATAAGGATAATAATTGTTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTCTGAAAGTCTTGCTAGAAGCAAGTTTCAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGCTACCTACTGCATAACCCAGATACCCTAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCTTTATGAAGGGGAATCGGGCATCTTAATCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTCCGTCCTCTACTGACTGTTTAAAAGTGTCACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGAACGACCGATTACCTCTCTCTCATGAAACCTTACGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCCACTGATAACGATAGAATTAATATCATCTAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCAATGGCTTTAATATGTGGGCATTCAAGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCGATCGCATGGCTGATCGTCTAAATCGGACTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCCATCAAACATTGTTTGCTGGCGGTTTTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCAGAATAATGTGGCGGGTGCGGTCAATCTTCTTCAAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGATAGTCTGATCCTGGTACAATATCATTAGTCAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGACTAACGTGATTGCGTTAGGCAATGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>NZ_CP012375|20|19|3602218-3607858|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTCAGGGTATTTTGGCTTAAATCCCCAAAATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGGTGTAAAGAGTCGATACATAGCACATATCCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTTCGGCTATTTTTAGCCCAATTCTGTAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGGAATTAATGCTTAAAAATACTGCTGAATTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGGTAACTGACTAGGGACGGTATCAGGCGAATTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGAACACTCAAGGATGCCCTAATCTCGTTGTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTTCTAGAGATTTTAGGGTAATTTCTAGGATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACCCCGCAGCACTCGGATCGATTTACGATTACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTATCGTGCCGTCGATTTCATCCCCATAGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCGTTGCCAGTCAGGTCTGTCGCGCCTGAAACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGCAAAGTGTTAAGGCTAGAATGGCGCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTGTTTTATTTGGTATCCACTCGATAATATCGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCTTTTTCTTTCGATTGGGGCCGGGAGTGTCTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCGGGACGGACGGTTATCTACTCAAGCTATCTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGATCGCCGCGTCGATCTTTTCCTCGAAGTTGGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGATCCGAGTCGGTACGACTGCCAGAAAACTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTGAGGGTCATCCCTACTACGCGCCCGTTAAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGGAAAATACCATTATGTTTGGTGATGAAGTCGATGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTGATACTGCAATTATACCTATTTGTGATTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATAGACGTTCCGCGAATACTACTTTAGCCCGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAGTCCATCAACACATATATGTGTTGATTTTCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGGCCAGGATTTTACCCTATCTGTACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTTTATACAAGATACTTATACATACTTTATACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAGGGTCGCTGGTAATATAAAATAAATCCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATAATTTAGAAGACTCGATCGATATCCAATCGCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCTAACTGTGACACTTTGAGAATTGGCACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATGATGATGCTTCTTTTCTGTTTTTAGCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGGTCTAATAATTCAAGCCCTGTCTCGTTAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGGGGTGAACCCGAAGGTAACTCGTGGGATTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACCTACTCTTTCCATATTTCTTCTCAAGCTGGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATTTTTTCGAGATTGGGAGAAATAGGAAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTCCTCTGATGAGGAAGCGGTGGTTTTTTATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCAGGATCAAAAGAATTGGGATTAAGATGTAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCAATCAAGAAACTCAAGAAAGCAATCAAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGTGAGATGCTGAAAAATAAACCCGTCTCTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGTTCCCGTTGCCGGTCAAGTCTTTTGCCCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGCTAATTTAGCGACTCCTTTAAATGGTATCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGGTAGCAATTAGAACTTTACTAGAATCCTCTTTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGTACACCGGCGATTATATCATTTACAGAATTGTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTACAAATAAAAGATTATGTAACTTTTATTAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTTTTAACGGTTTTGGGTTTCGTATCCTGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAAAAAACCATTATTTAGAAGCAAGAAAAAATGCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTTACCAGACCGGCATAATTCAAGGAATTGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGGGTGCGATACCCGTATCCTTGATAAATCGGTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TACCCTGGAATCATCGGGATTTGAAATCAAAGGCGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGGATAGTTTACATCGCTTTTATCTATCAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGTGTTTTTTGTAGTCCATATTTTGATATTTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGAATTTGAGAGAAATAAGAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTATCAGAAAAACTGTTTTATCTGTTGCCACTAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGTATAGTGTCAAGAGTTTTATTCTAAGTAGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTAATACTATCTTCTCTATTTCTTTTTGAATTTTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTTTTTTGCTTGCCAGACCTTAATGCAACTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTCATGGCACGTCAAACTATTTATTAAGCAATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTATTAGATTTTTTTTGTGCTATCATAGTAGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCGCTGGTTTCCTTTAGTTTTTTGATGTTTTCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCCCCTTCCCCCTCCGGCCCGACCGGCGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCATTAAAGGGGGATAAGGTTATCCCCCCAGCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGCGCGGCCGATGATGCTTTTTCCTTCCCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACATAAAATTCCCATCGGTTCCATCTTCTACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTCCCGTCGCTATGTGATTAAGAACAGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGGAAACTGTAGAGACTGACTCAATAGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAAAAAGAATTTGAGAGAAATAAAAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCATTGACTCGATTTGTTCATACTTAAAATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTGATATTGAAAATAAGGATAATAATTGTTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTCTGAAAGTCTTGCTAGAAGCAAGTTTCAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGCTACCTACTGCATAACCCAGATACCCTAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCTTTATGAAGGGGAATCGGGCATCTTAATCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTCCGTCCTCTACTGACTGTTTAAAAGTGTCACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGAACGACCGATTACCTCTCTCTCATGAAACCTTACGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCCACTGATAACGATAGAATTAATATCATCTAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCAATGGCTTTAATATGTGGGCATTCAAGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCGATCGCATGGCTGATCGTCTAAATCGGACTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCCATCAAACATTGTTTGCTGGCGGTTTTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCAGAATAATGTGGCGGGTGCGGTCAATCTTCTTCAAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGATAGTCTGATCCTGGTACAATATCATTAGTCAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGACTAACGTGATTGCGTTAGGCAATGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACT

>NZ_CP012375|20|2|3602218-3607857|CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTCAGGGTATTTTGGCTTAAATCCCCAAAATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGGTGTAAAGAGTCGATACATAGCACATATCCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTTCGGCTATTTTTAGCCCAATTCTGTAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGGAATTAATGCTTAAAAATACTGCTGAATTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGGTAACTGACTAGGGACGGTATCAGGCGAATTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGAACACTCAAGGATGCCCTAATCTCGTTGTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTTCTAGAGATTTTAGGGTAATTTCTAGGATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACCCCGCAGCACTCGGATCGATTTACGATTACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTATCGTGCCGTCGATTTCATCCCCATAGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCGTTGCCAGTCAGGTCTGTCGCGCCTGAAACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGCAAAGTGTTAAGGCTAGAATGGCGCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTGTTTTATTTGGTATCCACTCGATAATATCGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCTTTTTCTTTCGATTGGGGCCGGGAGTGTCTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCGGGACGGACGGTTATCTACTCAAGCTATCTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGATCGCCGCGTCGATCTTTTCCTCGAAGTTGGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGGATCCGAGTCGGTACGACTGCCAGAAAACTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTGAGGGTCATCCCTACTACGCGCCCGTTAAGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGGAAAATACCATTATGTTTGGTGATGAAGTCGATGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTGATACTGCAATTATACCTATTTGTGATTAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATAGACGTTCCGCGAATACTACTTTAGCCCGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAGTCCATCAACACATATATGTGTTGATTTTCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGGCCAGGATTTTACCCTATCTGTACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTTTATACAAGATACTTATACATACTTTATACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAGGGTCGCTGGTAATATAAAATAAATCCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATAATTTAGAAGACTCGATCGATATCCAATCGCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCTAACTGTGACACTTTGAGAATTGGCACTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATGATGATGCTTCTTTTCTGTTTTTAGCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGGTCTAATAATTCAAGCCCTGTCTCGTTAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGGGGTGAACCCGAAGGTAACTCGTGGGATTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACCTACTCTTTCCATATTTCTTCTCAAGCTGGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGAATTTTTTCGAGATTGGGAGAAATAGGAAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTCCTCTGATGAGGAAGCGGTGGTTTTTTATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCAGGATCAAAAGAATTGGGATTAAGATGTAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATCAATCAAGAAACTCAAGAAAGCAATCAAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGGTGAGATGCTGAAAAATAAACCCGTCTCTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGTTCCCGTTGCCGGTCAAGTCTTTTGCCCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGCTAATTTAGCGACTCCTTTAAATGGTATCGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGGTAGCAATTAGAACTTTACTAGAATCCTCTTTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CAGTACACCGGCGATTATATCATTTACAGAATTGTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTACAAATAAAAGATTATGTAACTTTTATTAGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTTTTAACGGTTTTGGGTTTCGTATCCTGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAAAAAACCATTATTTAGAAGCAAGAAAAAATGCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTTACCAGACCGGCATAATTCAAGGAATTGGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTGGGTGCGATACCCGTATCCTTGATAAATCGGTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TACCCTGGAATCATCGGGATTTGAAATCAAAGGCGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGTTCAACCGACCTAAAACAACTATTAGCAGGGG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGGATAGTTTACATCGCTTTTATCTATCAGAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGTGTTTTTTGTAGTCCATATTTTGATATTTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAAAAGAATTTGAGAGAAATAAGAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTATCAGAAAAACTGTTTTATCTGTTGCCACTAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGTATAGTGTCAAGAGTTTTATTCTAAGTAGTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTAATACTATCTTCTCTATTTCTTTTTGAATTTTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTGTTTTTTGCTTGCCAGACCTTAATGCAACTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTCATGGCACGTCAAACTATTTATTAAGCAATGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTATTAGATTTTTTTTGTGCTATCATAGTAGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCGCTGGTTTCCTTTAGTTTTTTGATGTTTTCC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCCCCCTTCCCCCTCCGGCCCGACCGGCGATCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCATTAAAGGGGGATAAGGTTATCCCCCCAGCGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGCGCGGCCGATGATGCTTTTTCCTTCCCCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAACATAAAATTCCCATCGGTTCCATCTTCTACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TATTCCCGTCGCTATGTGATTAAGAACAGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AATCAGGAAACTGTAGAGACTGACTCAATAGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCGAAAAAGAATTTGAGAGAAATAAAAGAAGATTTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCATTGACTCGATTTGTTCATACTTAAAATCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTTTGATATTGAAAATAAGGATAATAATTGTTATCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTCTGAAAGTCTTGCTAGAAGCAAGTTTCAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACGCTACCTACTGCATAACCCAGATACCCTAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCTTTATGAAGGGGAATCGGGCATCTTAATCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTCCGTCCTCTACTGACTGTTTAAAAGTGTCACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGGAACGACCGATTACCTCTCTCTCATGAAACCTTACGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCCACTGATAACGATAGAATTAATATCATCTAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGCAATGGCTTTAATATGTGGGCATTCAAGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCGATCGCATGGCTGATCGTCTAAATCGGACTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCCATCAAACATTGTTTGCTGGCGGTTTTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TCTCAGAATAATGTGGCGGGTGCGGTCAATCTTCTTCAAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTGATAGTCTGATCCTGGTACAATATCATTAGTCAC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGACTAACGTGATTGCGTTAGGCAATGTCCCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046663835.1\|3586570_3588274_-\|solute-carrier-26-family-protein	unknown	unknown	gnl\|CDD\|273284
NZ_CP012375.1\|WP_046663046.1\|3594657_3596811_+\|O-linked-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_080949780.1\|3593835_3594318_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|379187
NZ_CP012375.1\|WP_046663053.1\|3615618_3616452_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_CP012375.1\|WP_046663042.1\|3590683_3590926_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224246
NZ_CP012375.1\|WP_046663045.1\|3592745_3593807_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP012375.1\|WP_046663041.1\|3588573_3590538_-\|flavin-dependent-dehydrogenase	unknown	unknown	gnl\|CDD\|223717
NZ_CP012375.1\|WP_046663047.1\|3596828_3598994_+\|O-linked-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_103672725.1\|3599578_3600471_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP012375.1\|WP_046663050.1\|3613727_3614000_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP012375.1\|WP_046663043.1\|3590933_3591749_+\|DUF2993-domain-containing-protein	unknown	unknown	gnl\|CDD\|378597
NZ_CP012375.1\|WP_046661002.1\|3600794_3602021_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP012375.1\|WP_012266052.1\|3620614_3621508_-\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663054.1\|3616451_3617018_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_066030107.1\|3615022_3615616_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_CP012375.1\|WP_066030106.1\|3614012_3615017_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_CP012375.1\|WP_046663056.1\|3619786_3620611_-\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663055.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012375.1\|WP_046660474.1\|3610024_3611521_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319
NZ_CP012375.1\|WP_046660896.1\|3607916_3609065_-\|IS4-family-transposase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046663835.1\|3586570_3588274_-\|solute-carrier-26-family-protein	gnl\|CDD\|273284	TIGR00815, Sulfate_transporter, high affinity sulphate transporter 1. The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions].	7.97668e-158
NZ_CP012375.1\|WP_046663046.1\|3594657_3596811_+\|O-linked-N-acetylglucosamine-transferase	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.2671e-152
NZ_CP012375.1\|WP_080949780.1\|3593835_3594318_+\|cytochrome-c	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	3.50185e-08
NZ_CP012375.1\|WP_046663053.1\|3615618_3616452_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.28864e-45
NZ_CP012375.1\|WP_046663042.1\|3590683_3590926_+\|hypothetical-protein	gnl\|CDD\|224246	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription].	0.00107048
NZ_CP012375.1\|WP_046663045.1\|3592745_3593807_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	4.78128e-37
NZ_CP012375.1\|WP_046663041.1\|3588573_3590538_-\|flavin-dependent-dehydrogenase	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	3.48037e-13
NZ_CP012375.1\|WP_046663047.1\|3596828_3598994_+\|O-linked-N-acetylglucosamine-transferase	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.38343e-162
NZ_CP012375.1\|WP_103672725.1\|3599578_3600471_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.69658e-40
NZ_CP012375.1\|WP_046663050.1\|3613727_3614000_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.25525e-37
NZ_CP012375.1\|WP_046663043.1\|3590933_3591749_+\|DUF2993-domain-containing-protein	gnl\|CDD\|378597	pfam11209, DUF2993, Protein of unknown function (DUF2993). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.67573e-22
NZ_CP012375.1\|WP_046661002.1\|3600794_3602021_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80
NZ_CP012375.1\|WP_046663054.1\|3616451_3617018_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.55985e-27
NZ_CP012375.1\|WP_066030107.1\|3615022_3615616_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.46773e-53
NZ_CP012375.1\|WP_066030106.1\|3614012_3615017_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	9.27882e-142
NZ_CP012375.1\|WP_046663055.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.32697e-43
NZ_CP012375.1\|WP_046660474.1\|3610024_3611521_+\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>NZ_CP012375.1|WP_046661002.1|3600794_3602021_-|ISL3-family-transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>NZ_CP012375.1|WP_103672725.1|3599578_3600471_+|IS630-family-transposase
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKTLHAAEKESDRVQQKRVEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>NZ_CP012375.1|WP_046663047.1|3596828_3598994_+|O-linked-N-acetylglucosamine-transferase
MSWQNEVKTALENNQYDIVSQFYEELIERETTEISHYWYLGLAYLLEDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLRVTEKVLIYPCTDTIHFLELAALHINNPEIIATKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTIDYKKSLEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRTRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDLDSLTNNTTCLVIALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNSKQFTRNLETAYQQMWNIYCQS
>NZ_CP012375.1|WP_046663046.1|3594657_3596811_+|O-linked-N-acetylglucosamine-transferase
MSWHSQVEPAIIQGDFWQVSQFYEELIEREPLEISHYWYLGLAYLLEAREEEAQTTWLFVLSQGDEQEMNSWTVDLVNILDGEARRQVEVKNWQLSWVIRQHIYQINPDNLENLLYLVLLEIKLEYFYPQKLKDWQIVDLINSDKLENFDINLLLHTIYKLLDWPAQEVLDIIITLLKIDSQQSAILEIIEQHIEKIYYTDKTNAVILTLSCLDIIPDHLVLLHKIHQYYIDTGNFELALETANKIKNLSNDKAAKLYGIYLLLYTEILAGNWLNIDNKTQEYYQAIQNNLERGQCPMSNQAEVISITSPLAYLKDDLVGNRWLTNQLAKLFQEAVRKRFNQVTIESQKPKDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKVDKYNNLPANPQIIAEKINQDNIDILVDLDSITKDNTCRVMALKPAPIQITWLGLDATGIPAIDYFLVDNLVLEKNAQEFYQEKLWRLPNCYLAVDGFEIGIPTLTRQDLNIPADAITYLTLQVGLKRNPATIRLQMQIIKAVPNSYLLIKGAGSEKLINDLFISIAKEEGIDENRLRFLSGVANEEIHRANLQIADVVLDTYPYSGATTTLETLWMGIPVVTKVGQQWSSRNSYTFMTHGGISEGIAWSDEEYVQWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKDVENAYRQMWQIYCES
>NZ_CP012375.1|WP_080949780.1|3593835_3594318_+|cytochrome-c
MSYIILHLPISSSGGGILGQKVAKCKEKLIFPSAACVNSQLVKPKFGLYRFLMVIIVVLFLISTFLITFHLAKMSDPYIKEVLSRQGNVSRGYEIFQINCAACHGQFADGIVGPSLEDVSRRKSRISLIEQVISGKTPPMPKFQPDTQAMADLLVYLENL
>NZ_CP012375.1|WP_046663045.1|3592745_3593807_-|mechanosensitive-ion-channel-family-protein
MNLLTRLEDWPYIILPITIVLSFLLLGWLVEQRVVSQLLSIAREKNLRFSEGVLRSLRGLSILWFGLLGLNIALSLPNLPLFPSLILLSQKFLLVAFLASATWAIAQLSVEILRVYTTGDDGISSLTSLFEFLAKVLIFSCGFLLILSSVGISITPLLTAFGIGGVSLGLALQNTLANLMSGINIITSKKVRPGDYIELRTGEAGYVRDVDLRCTVVEEITNNLLVIPNAQIISSSFRNYSLPDHSLLVPVEVGISYDSDLEKVEKITREVIQEITQLLQPNLGDYQPLIRYGKFDYYSILLTVYLKVVEEEFFQHLTIKHEFIKLLHRRYQQEGIKIPYPIFFPYPPTNPPS
>NZ_CP012375.1|WP_046663043.1|3590933_3591749_+|DUF2993-domain-containing-protein
MEWLTITLASVLTLLTPAGAIIDRVLADILRSQVQKVEQLAVRVDNTPNYQALQGKIDRVRISARGIYPLADVRIEKIELETEPISLDLRRLQQKNGNLAASLRRPAAGALHLVLTETNVNQALQSAAVKGPIQTLINNLIPSREEFGITKYQFSQANFNFLNNNRVALRLQLETQRLDEPAASLDLSLEVGFKLVQGRKIELIDPTATLNGRRLSSRLLKGFAEGISTQLDLKNFEKQGIIARLLQLQIDDDKLSIAAFGRIEPRSGNPN
>NZ_CP012375.1|WP_046663042.1|3590683_3590926_+|hypothetical-protein
MNYPIPTTPEEIAALRQRPVDEEMIAAVIAGIIRMARAQGQSLNDLTEEILAEDQVLDQVQRRWLSQLLTNAWQNLAEWV
>NZ_CP012375.1|WP_046663041.1|3588573_3590538_-|flavin-dependent-dehydrogenase
MREILYREIPTPDSSAVCQWLQSDWQPASGVKTNTPNGVRLRLSEALELSIFVWTLQRTTYLKVFRWGERSHYLETSLTRQLDRALQKRFPPQYTTIPNIDQKNQSIFTALEADYPLTVHYFRKMPQGEADLERLYWWEKRWRDSAKNPQQPQPVIFSSSEENDHPIAYDLIYIGGALGAIHAAQMAKLGYRVLLVERLPFGRMNREWNISRSEFQSLINLGLFTAEEFEELIFQEYLDGFNKFFDGNNPPHLKAKILHTPTVLNIAINSDKLLQSCGKKLQDHGGKILDQTEFIKANITANSVTVTLNHSGEIQQIKGRLLIDAMGSASPIAWQLNGVRAFDSVCPTVGAVVEGFEPVVWDSHYGDVLNSHGDISKGRQLIWELFPGEGKELTFYLFHYHQVHPDNPGSLLEMYEDFFTILPEYRQCDPEKLTWKKPTFGYIPGHFSTGKKDRIVSFDRILAIGDAASLQSPLIFTGFGSLVRNLERLTDLLDMALKHNLLTAKDLENVRAYQSNVAVTWLFSKGMMVPTGKTLPPQRINAMLNTFFGLLADEPPEVSETFIKDKTDWLTFSRLAIKAARKNPALLLWIAEMAGSQDLIRWLGSYLDFSLDGVKNLFFGSWFPQWLKNSQSWLEKDNPRLWLKLLSFNYGLRN
>NZ_CP012375.1|WP_046663835.1|3586570_3588274_-|solute-carrier-26-family-protein
MVTRLNFSSEQFSLPGLKRLRSYRSAWLRGDIIAGITVAAYLVPQCLAYAELAGVQPIAGLWAILPPMLIYALLGSSPQLSVGPESTTAVMTAAAIMPLVAGDSSNYASLCSLLALLVGSVCCLAAFAQLGFLADLLSKPILVGYMAGVAVIMIVGQLGKISGMSLKAESLFGQIGEFSRHLSEIHPPTLILAAGVLIFLLLVQRRFPNAPGPLLAVLLATSAVYLFHLNERGIAVIGEIPAGLPSLKVPRGFSPQQFVYLLSSAIGIALVGYSDNVLTARAFGAKNDYRIDGNQELLALGALNIGNGIMQGFPVSSSGSRTAIGDSLGSRSQLFSLVAFLIVILVLLFLRPLLSLFPKAALGAIVIYAALRLIEISEFNRLRCFKTSEFRLALVTMFGVLATDILVGVGVAVGLSVVDLFTRLMRPHDAVLGEVPNLAGLHDIEDWQGATTIPGLVLYRYDAPLCFANAENFRKRAIAAIEAEQVPVEWFVLNAEAILDIDITAVDMLKELHRELIGRGITFAMARVKQDLYQQLKKGDLSETISTERIYPTLEEAIEAFHRKFWV
>NZ_CP012375.1|WP_046660896.1|3607916_3609065_-|IS4-family-transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>NZ_CP012375.1|WP_046660474.1|3610024_3611521_+|IS5-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>NZ_CP012375.1|WP_046663050.1|3613727_3614000_-|CRISPR-associated-endonuclease-Cas2
MYFVISYDISDDKRRTKIHNTLKSYGQRVQYSVFECDLTDTQYAKLRGRLSKLIKPDTDSIRFYFLCACCRGKVERIGGELPRDNTIFFV
>NZ_CP012375.1|WP_066030106.1|3614012_3615017_-|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTVYVTREDAFLGKNDERLTVKASKETILDVPLLNVEGVVLFGRGSLSPALVIELLERHIPLSFVTVTGKYLGRLEPEMTKNIFVRRAQWQAAGDSPKAIHLVRGFVRGKLKNYRNILLRRQRDRKELDLQTAIACLEAAIGSIETTSAIDSLRGLEGAGSAAYFSCFDSLILGDTFTFASRNRRPPRDPVNSLLSLGYALLRHDVQSAINLVGFDPYLGYLHYQRYGRPSLALDLMEEFRAIVVDAVVLNGVNHPYLTPEHFTTEPLSGAVSLTREGLQIFLRLYEQKKQSKFKHPVMSKQCTYQEAFEIQARLMAKYLMDETDKYPPLILK
>NZ_CP012375.1|WP_066030107.1|3615022_3615616_-|CRISPR-associated-protein-Cas4
MDESDYIPIAALNHYAYCPHRCWRMFVAGEFLNNSYTIEGTNLHERVHTVGAGNREEIWQIRAIWLKSDNYRLIGKADLIESHDGEFIPVEYKRGSKGEWDNDELQVCAQAICLEEMTGKKLDTGYIYYASSHQRQPVAIDLALRQRAIATIRAIETLIQTGKMPLAVYSPRCKGCSLFDRCLPRLTEKVQRYQEED
>NZ_CP012375.1|WP_046663053.1|3615618_3616452_-|CRISPR-associated-endoribonuclease-Cas6
MPYSLVLNLTPRSPIYPNFLTGRHLHALFLTLVSSVDQELGNILHASDADKAFTLSPLQMQSRRKTINFPRWRHEREIAPETPCWWRISLLDDRLFGKLTPLWLNLNPKQPWHLGSADLVITSVLATPQSVQPWANSCTYQYLYENASETNREFDFLFATPVTFRQGKFDSALPTRELVFNSLLSRWNRYSGISFDSIALESIFPSFFDIQTKLTDEAYKNQSIGCVGEIHYRLLGEVEPAKIKAINALADFALYAGVGRKTTMGMGMTRRISKDKR
>NZ_CP012375.1|WP_046663054.1|3616451_3617018_-|Uma2-family-endonuclease
MTLISSKSLTLPEFLSLTPPDGDITYELVDGEAIPKMSPKFFHSRLTGALFLLLDRWNQGRGEVGIEWAIVLSKNDRDWCPVPDLLYISPERLGDITLTDEACPVPPELVIEIISPEQSFSSLSEKAVDYLKAGVSRVWIVDPQAKQITIFYPDAPPAIKKGDDEMSDILLPDLTLTPGQIFAKARLS
>NZ_CP012375.1|WP_046663055.1|3617058_3619794_-|CRISPR-associated-helicase-Cas3'
MSKSNPQPFFKFGRVFFPGEPTIAPDKILFQPLGNHVGNVRQLARKWQDGNFSLERVIEGINLHDKAKPQTFKIRVETNKQGEFTKYTYSFKGHRFKVDNPQNLWVQALARGHHDYSTKEIIKDTYQLKKDTEYQKIFSKDPLQYAKELYILEMCDQIEAELACRVIGDDEQAKSRTFMDFTITKGTSEDSNHRVFYLDPYPFKEPTITLNFRSWTYNLSDEDKNQLQQLHENRKDKELGSKLNTLVKEWWKKNEHTISEDRAITAIIKPDNSNTYSPSEKSENAIFWWYEELANFQPNPMQEEVFQTMVKNQHPAFILKAPTGAGKFEAIIIPFLAMLSTKEDRPRLIIPLPARSLLEDQKQRCDKYLKQFSLLHKGREVSLVIDTGTEMNRYVYLDGEVKSSNNSRRHLYKGDIILTTIDKFIYRYFGYGDKQKSFIFPYRIYHGNTLICFDEAHTYDDISFTNFCSLVKALYEAGCSLVLMTATLSQNHLERFDYLADNMIDYIDVQDNLEKLNNFYQQILKQDYSNLKQFEFYEEPTNLQQKLTSIALEEWNSNPSHRIIVSVETVKDAIAIYEKIKQTLNIKFSEKKEFLFLYHGRLSDIPKTSHYSRTNLYQRLKERDENDQAYILVTTSAIEVGCDLNSTRLITQLCNPESLIQRAGRCNRKGNVEDAKIIVIGNNIPEFVNTLSEAELENYKTILKGLHDQNFDPKAIMNCVSTKQTIDDYRVVELFSLLQDYVYNADLTCQSAHEKGLVITRSWTPSVTLVYDDGKQGDSLEKIVKESPQIQVSIDRLILKKNNEGNYTNQYANVSVYEWIYDKEETRYKLEPLKYWGCAYSKELVIKVCAVQEGAISDSFEPYSYDHELGFKDLPGVFIKWRSNGYQERLQYNPTKDRSVVINYTSALTQD
>NZ_CP012375.1|WP_046663056.1|3619786_3620611_-|hypothetical-protein
MYCLTFKIIPTAAMTFRILPGSILNIATYPFVPPTTFSGFLRRIVMLSEGLDIPETSINKENPPYFTLPRQYIALGAYPVLDKWSGVHRTHRKGTRSFNHDVFSRLYIDGDRENFQLHTWEYFIAEELIGYVVSESKSSLEAFSNLQGVGCKIGKEGFAVIDEVSESIRLQRKILSAHPSTVVPMEALIQRNPCINRCDIYNLYRHEWSADQTQDEDKGLFDTERSPINGFIPFVAAYYPEKAHPLPTLDFYTDGNLQIPVALVELLQRESINV
>NZ_CP012375.1|WP_012266052.1|3620614_3621508_-|hypothetical-protein
MATESKVTTGLPKTDANKPRLHFDIYAILEGSQELYLGHEVQVNVNLVEIVKLSTKDGKEIEKCYISPTKRRGVERRCLLWSPVKSGELLGDKQNCGIPKTCAEPTCPICATFGALDPGKRTLIGRVTHGGGVAIQEIYPVEKQRAMHPALLVNRNDETPTPFRREYNQPGILYPVYNHALSITDQDFSAVAYAFLDSLPRIGSGNPKGIAIAETDDRTPLLVLDRYLSPRGKRPIVSPSETDPQKAINDFLYLALYPETNFTNHIQEAHFDRWIGNEALAKLQEYSAIFVDTVLQA

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Crispr_ID: NZ_CP012375_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_21

3609178-3609866

Unclear

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRT

9 spacers

cas2,cas1,cas4,cas6,cas3,cas5,cas7,cas8b5

The CRISPR arrays of NZ_CP012375_21

>merge|NZ_CP012375|21|3609178-3609866|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTTGCCCACTGACGCACAAAAGCAATTAAACAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTTCGCTTGATTGGTACTCCAGACAAGGAAAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTTGGTGTTGCAAGAGTGTCCAGATTTGGTACGCCGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTGGTATGTGAGCATTACCCATGATCAGGATTCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGAACAAAATATTGTCTATTCTATTACGAGAATAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGTGCGATTGTGGTGGTCGGTGTTGCTGCAGTGTGGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAATGTCAATATCTCTGGAAGTTGGCAAAATAAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTTTTTCGCCATTGTCACGTCTTACACAGTCGATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGTTATCAGTAATTAACCCATTTAGGAGTACCAAAAAATGACTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>NZ_CP012375|21|4|3609178-3609866|PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTGCCCACTGACGCACAAAAGCAATTAAACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCGCTTGATTGGTACTCCAGACAAGGAAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTGGTGTTGCAAGAGTGTCCAGATTTGGTACGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGGTATGTGAGCATTACCCATGATCAGGATTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGAACAAAATATTGTCTATTCTATTACGAGAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGCGATTGTGGTGGTCGGTGTTGCTGCAGTGTGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAATGTCAATATCTCTGGAAGTTGGCAAAATAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTTTTCGCCATTGTCACGTCTTACACAGTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTATCAGTAATTAACCCATTTAGGAGTACCAAAAAATGACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>NZ_CP012375|21|20|3609178-3609866|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTGCCCACTGACGCACAAAAGCAATTAAACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCGCTTGATTGGTACTCCAGACAAGGAAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTGGTGTTGCAAGAGTGTCCAGATTTGGTACGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGGTATGTGAGCATTACCCATGATCAGGATTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGAACAAAATATTGTCTATTCTATTACGAGAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGCGATTGTGGTGGTCGGTGTTGCTGCAGTGTGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAATGTCAATATCTCTGGAAGTTGGCAAAATAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTTTTCGCCATTGTCACGTCTTACACAGTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTATCAGTAATTAACCCATTTAGGAGTACCAAAAAATGACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>NZ_CP012375|21|3|3609178-3609866|CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTGCCCACTGACGCACAAAAGCAATTAAACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTCGCTTGATTGGTACTCCAGACAAGGAAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTTGGTGTTGCAAGAGTGTCCAGATTTGGTACGCCG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTGGTATGTGAGCATTACCCATGATCAGGATTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGAACAAAATATTGTCTATTCTATTACGAGAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGTGCGATTGTGGTGGTCGGTGTTGCTGCAGTGTGGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAATGTCAATATCTCTGGAAGTTGGCAAAATAAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTTTTCGCCATTGTCACGTCTTACACAGTCGAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GTTATCAGTAATTAACCCATTTAGGAGTACCAAAAAATGACT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046663046.1\|3594657_3596811_+\|O-linked-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_080949780.1\|3593835_3594318_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|379187
NZ_CP012375.1\|WP_046663053.1\|3615618_3616452_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_CP012375.1\|WP_046663042.1\|3590683_3590926_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224246
NZ_CP012375.1\|WP_046663045.1\|3592745_3593807_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP012375.1\|WP_046663041.1\|3588573_3590538_-\|flavin-dependent-dehydrogenase	unknown	unknown	gnl\|CDD\|223717
NZ_CP012375.1\|WP_046663047.1\|3596828_3598994_+\|O-linked-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_103672725.1\|3599578_3600471_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP012375.1\|WP_046663050.1\|3613727_3614000_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP012375.1\|WP_066030108.1\|3621510_3624042_-\|hypothetical-protein	cas8b5	mkCas0131_cas8b5_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663043.1\|3590933_3591749_+\|DUF2993-domain-containing-protein	unknown	unknown	gnl\|CDD\|378597
NZ_CP012375.1\|WP_046661002.1\|3600794_3602021_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP012375.1\|WP_012266052.1\|3620614_3621508_-\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663054.1\|3616451_3617018_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_066030107.1\|3615022_3615616_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_CP012375.1\|WP_066030106.1\|3614012_3615017_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_CP012375.1\|WP_046663056.1\|3619786_3620611_-\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663055.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012375.1\|WP_046660474.1\|3610024_3611521_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319
NZ_CP012375.1\|WP_046660896.1\|3607916_3609065_-\|IS4-family-transposase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046663046.1\|3594657_3596811_+\|O-linked-N-acetylglucosamine-transferase	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.2671e-152
NZ_CP012375.1\|WP_080949780.1\|3593835_3594318_+\|cytochrome-c	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	3.50185e-08
NZ_CP012375.1\|WP_046663053.1\|3615618_3616452_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.28864e-45
NZ_CP012375.1\|WP_046663042.1\|3590683_3590926_+\|hypothetical-protein	gnl\|CDD\|224246	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription].	0.00107048
NZ_CP012375.1\|WP_046663045.1\|3592745_3593807_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	4.78128e-37
NZ_CP012375.1\|WP_046663041.1\|3588573_3590538_-\|flavin-dependent-dehydrogenase	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	3.48037e-13
NZ_CP012375.1\|WP_046663047.1\|3596828_3598994_+\|O-linked-N-acetylglucosamine-transferase	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.38343e-162
NZ_CP012375.1\|WP_103672725.1\|3599578_3600471_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.69658e-40
NZ_CP012375.1\|WP_046663050.1\|3613727_3614000_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.25525e-37
NZ_CP012375.1\|WP_046663043.1\|3590933_3591749_+\|DUF2993-domain-containing-protein	gnl\|CDD\|378597	pfam11209, DUF2993, Protein of unknown function (DUF2993). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.67573e-22
NZ_CP012375.1\|WP_046661002.1\|3600794_3602021_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80
NZ_CP012375.1\|WP_046663054.1\|3616451_3617018_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.55985e-27
NZ_CP012375.1\|WP_066030107.1\|3615022_3615616_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.46773e-53
NZ_CP012375.1\|WP_066030106.1\|3614012_3615017_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	9.27882e-142
NZ_CP012375.1\|WP_046663055.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.32697e-43
NZ_CP012375.1\|WP_046660474.1\|3610024_3611521_+\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>NZ_CP012375.1|WP_046660896.1|3607916_3609065_-|IS4-family-transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>NZ_CP012375.1|WP_046661002.1|3600794_3602021_-|ISL3-family-transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>NZ_CP012375.1|WP_103672725.1|3599578_3600471_+|IS630-family-transposase
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKTLHAAEKESDRVQQKRVEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>NZ_CP012375.1|WP_046663047.1|3596828_3598994_+|O-linked-N-acetylglucosamine-transferase
MSWQNEVKTALENNQYDIVSQFYEELIERETTEISHYWYLGLAYLLEDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLRVTEKVLIYPCTDTIHFLELAALHINNPEIIATKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTIDYKKSLEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRTRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDLDSLTNNTTCLVIALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNSKQFTRNLETAYQQMWNIYCQS
>NZ_CP012375.1|WP_046663046.1|3594657_3596811_+|O-linked-N-acetylglucosamine-transferase
MSWHSQVEPAIIQGDFWQVSQFYEELIEREPLEISHYWYLGLAYLLEAREEEAQTTWLFVLSQGDEQEMNSWTVDLVNILDGEARRQVEVKNWQLSWVIRQHIYQINPDNLENLLYLVLLEIKLEYFYPQKLKDWQIVDLINSDKLENFDINLLLHTIYKLLDWPAQEVLDIIITLLKIDSQQSAILEIIEQHIEKIYYTDKTNAVILTLSCLDIIPDHLVLLHKIHQYYIDTGNFELALETANKIKNLSNDKAAKLYGIYLLLYTEILAGNWLNIDNKTQEYYQAIQNNLERGQCPMSNQAEVISITSPLAYLKDDLVGNRWLTNQLAKLFQEAVRKRFNQVTIESQKPKDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKVDKYNNLPANPQIIAEKINQDNIDILVDLDSITKDNTCRVMALKPAPIQITWLGLDATGIPAIDYFLVDNLVLEKNAQEFYQEKLWRLPNCYLAVDGFEIGIPTLTRQDLNIPADAITYLTLQVGLKRNPATIRLQMQIIKAVPNSYLLIKGAGSEKLINDLFISIAKEEGIDENRLRFLSGVANEEIHRANLQIADVVLDTYPYSGATTTLETLWMGIPVVTKVGQQWSSRNSYTFMTHGGISEGIAWSDEEYVQWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKDVENAYRQMWQIYCES
>NZ_CP012375.1|WP_080949780.1|3593835_3594318_+|cytochrome-c
MSYIILHLPISSSGGGILGQKVAKCKEKLIFPSAACVNSQLVKPKFGLYRFLMVIIVVLFLISTFLITFHLAKMSDPYIKEVLSRQGNVSRGYEIFQINCAACHGQFADGIVGPSLEDVSRRKSRISLIEQVISGKTPPMPKFQPDTQAMADLLVYLENL
>NZ_CP012375.1|WP_046663045.1|3592745_3593807_-|mechanosensitive-ion-channel-family-protein
MNLLTRLEDWPYIILPITIVLSFLLLGWLVEQRVVSQLLSIAREKNLRFSEGVLRSLRGLSILWFGLLGLNIALSLPNLPLFPSLILLSQKFLLVAFLASATWAIAQLSVEILRVYTTGDDGISSLTSLFEFLAKVLIFSCGFLLILSSVGISITPLLTAFGIGGVSLGLALQNTLANLMSGINIITSKKVRPGDYIELRTGEAGYVRDVDLRCTVVEEITNNLLVIPNAQIISSSFRNYSLPDHSLLVPVEVGISYDSDLEKVEKITREVIQEITQLLQPNLGDYQPLIRYGKFDYYSILLTVYLKVVEEEFFQHLTIKHEFIKLLHRRYQQEGIKIPYPIFFPYPPTNPPS
>NZ_CP012375.1|WP_046663043.1|3590933_3591749_+|DUF2993-domain-containing-protein
MEWLTITLASVLTLLTPAGAIIDRVLADILRSQVQKVEQLAVRVDNTPNYQALQGKIDRVRISARGIYPLADVRIEKIELETEPISLDLRRLQQKNGNLAASLRRPAAGALHLVLTETNVNQALQSAAVKGPIQTLINNLIPSREEFGITKYQFSQANFNFLNNNRVALRLQLETQRLDEPAASLDLSLEVGFKLVQGRKIELIDPTATLNGRRLSSRLLKGFAEGISTQLDLKNFEKQGIIARLLQLQIDDDKLSIAAFGRIEPRSGNPN
>NZ_CP012375.1|WP_046663042.1|3590683_3590926_+|hypothetical-protein
MNYPIPTTPEEIAALRQRPVDEEMIAAVIAGIIRMARAQGQSLNDLTEEILAEDQVLDQVQRRWLSQLLTNAWQNLAEWV
>NZ_CP012375.1|WP_046663041.1|3588573_3590538_-|flavin-dependent-dehydrogenase
MREILYREIPTPDSSAVCQWLQSDWQPASGVKTNTPNGVRLRLSEALELSIFVWTLQRTTYLKVFRWGERSHYLETSLTRQLDRALQKRFPPQYTTIPNIDQKNQSIFTALEADYPLTVHYFRKMPQGEADLERLYWWEKRWRDSAKNPQQPQPVIFSSSEENDHPIAYDLIYIGGALGAIHAAQMAKLGYRVLLVERLPFGRMNREWNISRSEFQSLINLGLFTAEEFEELIFQEYLDGFNKFFDGNNPPHLKAKILHTPTVLNIAINSDKLLQSCGKKLQDHGGKILDQTEFIKANITANSVTVTLNHSGEIQQIKGRLLIDAMGSASPIAWQLNGVRAFDSVCPTVGAVVEGFEPVVWDSHYGDVLNSHGDISKGRQLIWELFPGEGKELTFYLFHYHQVHPDNPGSLLEMYEDFFTILPEYRQCDPEKLTWKKPTFGYIPGHFSTGKKDRIVSFDRILAIGDAASLQSPLIFTGFGSLVRNLERLTDLLDMALKHNLLTAKDLENVRAYQSNVAVTWLFSKGMMVPTGKTLPPQRINAMLNTFFGLLADEPPEVSETFIKDKTDWLTFSRLAIKAARKNPALLLWIAEMAGSQDLIRWLGSYLDFSLDGVKNLFFGSWFPQWLKNSQSWLEKDNPRLWLKLLSFNYGLRN
>NZ_CP012375.1|WP_046660474.1|3610024_3611521_+|IS5-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>NZ_CP012375.1|WP_046663050.1|3613727_3614000_-|CRISPR-associated-endonuclease-Cas2
MYFVISYDISDDKRRTKIHNTLKSYGQRVQYSVFECDLTDTQYAKLRGRLSKLIKPDTDSIRFYFLCACCRGKVERIGGELPRDNTIFFV
>NZ_CP012375.1|WP_066030106.1|3614012_3615017_-|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTVYVTREDAFLGKNDERLTVKASKETILDVPLLNVEGVVLFGRGSLSPALVIELLERHIPLSFVTVTGKYLGRLEPEMTKNIFVRRAQWQAAGDSPKAIHLVRGFVRGKLKNYRNILLRRQRDRKELDLQTAIACLEAAIGSIETTSAIDSLRGLEGAGSAAYFSCFDSLILGDTFTFASRNRRPPRDPVNSLLSLGYALLRHDVQSAINLVGFDPYLGYLHYQRYGRPSLALDLMEEFRAIVVDAVVLNGVNHPYLTPEHFTTEPLSGAVSLTREGLQIFLRLYEQKKQSKFKHPVMSKQCTYQEAFEIQARLMAKYLMDETDKYPPLILK
>NZ_CP012375.1|WP_066030107.1|3615022_3615616_-|CRISPR-associated-protein-Cas4
MDESDYIPIAALNHYAYCPHRCWRMFVAGEFLNNSYTIEGTNLHERVHTVGAGNREEIWQIRAIWLKSDNYRLIGKADLIESHDGEFIPVEYKRGSKGEWDNDELQVCAQAICLEEMTGKKLDTGYIYYASSHQRQPVAIDLALRQRAIATIRAIETLIQTGKMPLAVYSPRCKGCSLFDRCLPRLTEKVQRYQEED
>NZ_CP012375.1|WP_046663053.1|3615618_3616452_-|CRISPR-associated-endoribonuclease-Cas6
MPYSLVLNLTPRSPIYPNFLTGRHLHALFLTLVSSVDQELGNILHASDADKAFTLSPLQMQSRRKTINFPRWRHEREIAPETPCWWRISLLDDRLFGKLTPLWLNLNPKQPWHLGSADLVITSVLATPQSVQPWANSCTYQYLYENASETNREFDFLFATPVTFRQGKFDSALPTRELVFNSLLSRWNRYSGISFDSIALESIFPSFFDIQTKLTDEAYKNQSIGCVGEIHYRLLGEVEPAKIKAINALADFALYAGVGRKTTMGMGMTRRISKDKR
>NZ_CP012375.1|WP_046663054.1|3616451_3617018_-|Uma2-family-endonuclease
MTLISSKSLTLPEFLSLTPPDGDITYELVDGEAIPKMSPKFFHSRLTGALFLLLDRWNQGRGEVGIEWAIVLSKNDRDWCPVPDLLYISPERLGDITLTDEACPVPPELVIEIISPEQSFSSLSEKAVDYLKAGVSRVWIVDPQAKQITIFYPDAPPAIKKGDDEMSDILLPDLTLTPGQIFAKARLS
>NZ_CP012375.1|WP_046663055.1|3617058_3619794_-|CRISPR-associated-helicase-Cas3'
MSKSNPQPFFKFGRVFFPGEPTIAPDKILFQPLGNHVGNVRQLARKWQDGNFSLERVIEGINLHDKAKPQTFKIRVETNKQGEFTKYTYSFKGHRFKVDNPQNLWVQALARGHHDYSTKEIIKDTYQLKKDTEYQKIFSKDPLQYAKELYILEMCDQIEAELACRVIGDDEQAKSRTFMDFTITKGTSEDSNHRVFYLDPYPFKEPTITLNFRSWTYNLSDEDKNQLQQLHENRKDKELGSKLNTLVKEWWKKNEHTISEDRAITAIIKPDNSNTYSPSEKSENAIFWWYEELANFQPNPMQEEVFQTMVKNQHPAFILKAPTGAGKFEAIIIPFLAMLSTKEDRPRLIIPLPARSLLEDQKQRCDKYLKQFSLLHKGREVSLVIDTGTEMNRYVYLDGEVKSSNNSRRHLYKGDIILTTIDKFIYRYFGYGDKQKSFIFPYRIYHGNTLICFDEAHTYDDISFTNFCSLVKALYEAGCSLVLMTATLSQNHLERFDYLADNMIDYIDVQDNLEKLNNFYQQILKQDYSNLKQFEFYEEPTNLQQKLTSIALEEWNSNPSHRIIVSVETVKDAIAIYEKIKQTLNIKFSEKKEFLFLYHGRLSDIPKTSHYSRTNLYQRLKERDENDQAYILVTTSAIEVGCDLNSTRLITQLCNPESLIQRAGRCNRKGNVEDAKIIVIGNNIPEFVNTLSEAELENYKTILKGLHDQNFDPKAIMNCVSTKQTIDDYRVVELFSLLQDYVYNADLTCQSAHEKGLVITRSWTPSVTLVYDDGKQGDSLEKIVKESPQIQVSIDRLILKKNNEGNYTNQYANVSVYEWIYDKEETRYKLEPLKYWGCAYSKELVIKVCAVQEGAISDSFEPYSYDHELGFKDLPGVFIKWRSNGYQERLQYNPTKDRSVVINYTSALTQD
>NZ_CP012375.1|WP_046663056.1|3619786_3620611_-|hypothetical-protein
MYCLTFKIIPTAAMTFRILPGSILNIATYPFVPPTTFSGFLRRIVMLSEGLDIPETSINKENPPYFTLPRQYIALGAYPVLDKWSGVHRTHRKGTRSFNHDVFSRLYIDGDRENFQLHTWEYFIAEELIGYVVSESKSSLEAFSNLQGVGCKIGKEGFAVIDEVSESIRLQRKILSAHPSTVVPMEALIQRNPCINRCDIYNLYRHEWSADQTQDEDKGLFDTERSPINGFIPFVAAYYPEKAHPLPTLDFYTDGNLQIPVALVELLQRESINV
>NZ_CP012375.1|WP_012266052.1|3620614_3621508_-|hypothetical-protein
MATESKVTTGLPKTDANKPRLHFDIYAILEGSQELYLGHEVQVNVNLVEIVKLSTKDGKEIEKCYISPTKRRGVERRCLLWSPVKSGELLGDKQNCGIPKTCAEPTCPICATFGALDPGKRTLIGRVTHGGGVAIQEIYPVEKQRAMHPALLVNRNDETPTPFRREYNQPGILYPVYNHALSITDQDFSAVAYAFLDSLPRIGSGNPKGIAIAETDDRTPLLVLDRYLSPRGKRPIVSPSETDPQKAINDFLYLALYPETNFTNHIQEAHFDRWIGNEALAKLQEYSAIFVDTVLQA
>NZ_CP012375.1|WP_066030108.1|3621510_3624042_-|hypothetical-protein
MSIKQLSLFENVSPEQDTKAVTTSEEISELEITILLSALTANAIAQTDSTLISALADDPRAIAIAKTFDCPKLVRQLRLSQPQKESEFIKPTFQGNQVFYREREIGEIQLVYKSPSPGELQAKLTHESTIDRFLEFLQKKYQIVSLHESNYHVQIFIPQTQQSHNIEELWIEFITKVIFSIYGDFQYQLSGLMQTFITMLKSVTLAGRGFSTLEIPIITRDQAKVLAAFYLAIFEQVKDRQEKRETEIVQLIEKIKSEELNSKDLESTEKKLKSKQEMQAKEFNKYRDYFQKVLSKLLDEQRAIYHERRNLDEQLGKTGLSKAQVSKLQKQKDKIESQIIFQEDSIEEKQRFLEESDGNPFKFIEKQKQTDLLKPIQAIAKSFNKTATEQINSTRGDIFTQCILEMYRLLENPKLETIPEPLLTINPKILAARTAGDDGKDFCYSCGVTLDAKTVRWRVARFMFERPSQRRQSSSSEDRPFICSSCSVLSFASPLKVTDDSIILRLESQDDRGVTKVKIKDYLRMLTNKEVHLSSGCYIALTSEKTITGDTASKKLGQFQYALAKVASIFPLEVIKDFKFVLQLQRTEKVLVSRQLIFIKGLIEGYDQSIIVSGKDINLKLGDAIRYVQQDSPYLADYTLLKASSISDRLLLERVREQYLQTIIQDIQGETMTIDSLWKRAKLYEDVAALTGLTYAFAQSLESTAKKLMKPEDAEREVSKLIEKVDDPVAFSYYATLGDEKKISVQARLYHNPDNYFIYEQAKKMLENKLEITNREEVDNSGKKWLVFYADDITKSYAYFANPDQVGNYAQEKEWKNLTYNLKLSLYTRFPELVRKLSSKGDK

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Crispr_ID: NZ_CP012375_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_22

3611590-3613494

TypeV

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CRT

26 spacers

cas2,cas1,cas4,cas6,cas3,cas5,cas7,cas8b5

The CRISPR arrays of NZ_CP012375_22

>merge|NZ_CP012375|22|3611590-3613494|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAGAGCGTCTAGGAGGGCTGCTTATGGCGTAATCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACTCGCTAAAGTCTTTGGGGGGAGATGTAGAAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATGGGTTAGTCTGTGGGGATAGTATAGAGAAAACTGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACACAGACTCAACCTTATCAGCAATCTCAACGGTATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGATCGATCTGATCGAGCGATCATCTTCTTTCTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACATTTAGTGGAATTGGCTAATCAAGCTGGTGATGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGCGCTTTTGATCTCAATAACTCAGGATTTAATAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGAAACCGAAGATTAATTTTATCAGACTCAAACCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTGCCGAAAGGCAAATTCGCAACTTTTGCGGATTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAGCTTTCTTTCAGTACCCGGCTCACAAGCCTGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTTATTTGATTCCGATAAGCTATTAGAGCAGTTACAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTTCTTGTCTGAGGATACTAAATAATCTAGGTTTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAACGGACGCGATCGGAACCGTACCGGGTGAGGGAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAAAGACAAGCTTTTGGGGACTTGGCAAAAAGCCAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGACTTAAGGCCGTCATGGCAGACCGGGATGTAAATGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGCATTAGATGATTTACTGCAATCCCTTGAGGGATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGCCGTCAAGGCTCAACCCTGCTAACTGGTAAACTCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACTAGATGGTTTTTTAGGGTGTCTAGAATACTGTTTAGGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTTCCTTGCTTTAAGCTTGGCAGCGTACTTGTCTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCTTAATAGCGAGTCACCCTTGTCGGGGTTAGTCATTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGGAAATTTCCCCACTGAGAAAGCAGTCCATTAGCGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCGTTGACGGCTGCCGTCCGGGAACCGGCGATGAGAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAGTCTTCTGGCAATTAGGCCGCGCCCTAAAATTGTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACCCTCACTTTTATACGATTTTATTAATCAATGCCTAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACAAATTACGGTTTTTTCTGGATCGGCGCGAAGGTTGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAACGAGATCACTTTTACTAATATCCTACTCCAAAAAAGTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>NZ_CP012375|22|5|3611590-3613494|PILER-CR
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGAGCGTCTAGGAGGGCTGCTTATGGCGTAATC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTCGCTAAAGTCTTTGGGGGGAGATGTAGAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGGTTAGTCTGTGGGGATAGTATAGAGAAAACTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACAGACTCAACCTTATCAGCAATCTCAACGGTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGATCGATCTGATCGAGCGATCATCTTCTTTCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTTAGTGGAATTGGCTAATCAAGCTGGTGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCGCTTTTGATCTCAATAACTCAGGATTTAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAACCGAAGATTAATTTTATCAGACTCAAACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCGAAAGGCAAATTCGCAACTTTTGCGGATTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCTTTCTTTCAGTACCCGGCTCACAAGCCTGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATTTGATTCCGATAAGCTATTAGAGCAGTTACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTCTTGTCTGAGGATACTAAATAATCTAGGTTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AACGGACGCGATCGGAACCGTACCGGGTGAGGGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGACAAGCTTTTGGGGACTTGGCAAAAAGCCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GACTTAAGGCCGTCATGGCAGACCGGGATGTAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCATTAGATGATTTACTGCAATCCCTTGAGGGATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCCGTCAAGGCTCAACCCTGCTAACTGGTAAACTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGATGGTTTTTTAGGGTGTCTAGAATACTGTTTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTCCTTGCTTTAAGCTTGGCAGCGTACTTGTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTAATAGCGAGTCACCCTTGTCGGGGTTAGTCATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGAAATTTCCCCACTGAGAAAGCAGTCCATTAGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTGACGGCTGCCGTCCGGGAACCGGCGATGAGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTCTTCTGGCAATTAGGCCGCGCCCTAAAATTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCACTTTTATACGATTTTATTAATCAATGCCTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTACGGTTTTTTCTGGATCGGCGCGAAGGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAGATCACTTTTACTAATATCCTACTCCAAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>NZ_CP012375|22|21|3611590-3613494|CRISPRCasFinder
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGAGCGTCTAGGAGGGCTGCTTATGGCGTAATC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTCGCTAAAGTCTTTGGGGGGAGATGTAGAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGGTTAGTCTGTGGGGATAGTATAGAGAAAACTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACAGACTCAACCTTATCAGCAATCTCAACGGTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGATCGATCTGATCGAGCGATCATCTTCTTTCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTTAGTGGAATTGGCTAATCAAGCTGGTGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCGCTTTTGATCTCAATAACTCAGGATTTAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAACCGAAGATTAATTTTATCAGACTCAAACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCGAAAGGCAAATTCGCAACTTTTGCGGATTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCTTTCTTTCAGTACCCGGCTCACAAGCCTGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATTTGATTCCGATAAGCTATTAGAGCAGTTACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTCTTGTCTGAGGATACTAAATAATCTAGGTTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AACGGACGCGATCGGAACCGTACCGGGTGAGGGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGACAAGCTTTTGGGGACTTGGCAAAAAGCCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GACTTAAGGCCGTCATGGCAGACCGGGATGTAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCATTAGATGATTTACTGCAATCCCTTGAGGGATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCCGTCAAGGCTCAACCCTGCTAACTGGTAAACTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGATGGTTTTTTAGGGTGTCTAGAATACTGTTTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTCCTTGCTTTAAGCTTGGCAGCGTACTTGTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTAATAGCGAGTCACCCTTGTCGGGGTTAGTCATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGAAATTTCCCCACTGAGAAAGCAGTCCATTAGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTGACGGCTGCCGTCCGGGAACCGGCGATGAGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTCTTCTGGCAATTAGGCCGCGCCCTAAAATTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCACTTTTATACGATTTTATTAATCAATGCCTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTACGGTTTTTTCTGGATCGGCGCGAAGGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAGATCACTTTTACTAATATCCTACTCCAAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

>NZ_CP012375|22|4|3611590-3613494|CRT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGAGCGTCTAGGAGGGCTGCTTATGGCGTAATC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACTCGCTAAAGTCTTTGGGGGGAGATGTAGAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATGGGTTAGTCTGTGGGGATAGTATAGAGAAAACTG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ACAGACTCAACCTTATCAGCAATCTCAACGGTATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGATCGATCTGATCGAGCGATCATCTTCTTTCTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	ATTTAGTGGAATTGGCTAATCAAGCTGGTGATG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCGCTTTTGATCTCAATAACTCAGGATTTAATAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAAACCGAAGATTAATTTTATCAGACTCAAACCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TGCCGAAAGGCAAATTCGCAACTTTTGCGGATTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAGCTTTCTTTCAGTACCCGGCTCACAAGCCTGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TTATTTGATTCCGATAAGCTATTAGAGCAGTTACAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTCTTGTCTGAGGATACTAAATAATCTAGGTTTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AACGGACGCGATCGGAACCGTACCGGGTGAGGGAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAAAGACAAGCTTTTGGGGACTTGGCAAAAAGCCAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GACTTAAGGCCGTCATGGCAGACCGGGATGTAAAT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCATTAGATGATTTACTGCAATCCCTTGAGGGATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GCCGTCAAGGCTCAACCCTGCTAACTGGTAAACTC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	TAGATGGTTTTTTAGGGTGTCTAGAATACTGTTTAG
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTTCCTTGCTTTAAGCTTGGCAGCGTACTTGTCT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CTTAATAGCGAGTCACCCTTGTCGGGGTTAGTCATT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GGAAATTTCCCCACTGAGAAAGCAGTCCATTAGC
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CGTTGACGGCTGCCGTCCGGGAACCGGCGATGAGA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AGTCTTCTGGCAATTAGGCCGCGCCCTAAAATTGT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	CCTCACTTTTATACGATTTTATTAATCAATGCCTA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	AAATTACGGTTTTTTCTGGATCGGCGCGAAGGTT
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC	GAGATCACTTTTACTAATATCCTACTCCAAAAAA
GTTTCAATCCCTAATAGGGTTTAAGATTAATTGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046663046.1\|3594657_3596811_+\|O-linked-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_080949780.1\|3593835_3594318_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|379187
NZ_CP012375.1\|WP_046663053.1\|3615618_3616452_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_CP012375.1\|WP_046663042.1\|3590683_3590926_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224246
NZ_CP012375.1\|WP_046663045.1\|3592745_3593807_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP012375.1\|WP_046663047.1\|3596828_3598994_+\|O-linked-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|226428
NZ_CP012375.1\|WP_103672725.1\|3599578_3600471_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP012375.1\|WP_046663050.1\|3613727_3614000_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP012375.1\|WP_066030108.1\|3621510_3624042_-\|hypothetical-protein	cas8b5	mkCas0131_cas8b5_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663043.1\|3590933_3591749_+\|DUF2993-domain-containing-protein	unknown	unknown	gnl\|CDD\|378597
NZ_CP012375.1\|WP_046661002.1\|3600794_3602021_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP012375.1\|WP_158657265.1\|3624129_3624294_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_012266052.1\|3620614_3621508_-\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663054.1\|3616451_3617018_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_066030107.1\|3615022_3615616_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_CP012375.1\|WP_066030106.1\|3614012_3615017_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_CP012375.1\|WP_046663056.1\|3619786_3620611_-\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
NZ_CP012375.1\|WP_046663055.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012375.1\|WP_046660474.1\|3610024_3611521_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319
NZ_CP012375.1\|WP_046660896.1\|3607916_3609065_-\|IS4-family-transposase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046663046.1\|3594657_3596811_+\|O-linked-N-acetylglucosamine-transferase	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.2671e-152
NZ_CP012375.1\|WP_080949780.1\|3593835_3594318_+\|cytochrome-c	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	3.50185e-08
NZ_CP012375.1\|WP_046663053.1\|3615618_3616452_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.28864e-45
NZ_CP012375.1\|WP_046663042.1\|3590683_3590926_+\|hypothetical-protein	gnl\|CDD\|224246	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription].	0.00107048
NZ_CP012375.1\|WP_046663045.1\|3592745_3593807_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	4.78128e-37
NZ_CP012375.1\|WP_046663047.1\|3596828_3598994_+\|O-linked-N-acetylglucosamine-transferase	gnl\|CDD\|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	3.38343e-162
NZ_CP012375.1\|WP_103672725.1\|3599578_3600471_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.69658e-40
NZ_CP012375.1\|WP_046663050.1\|3613727_3614000_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.25525e-37
NZ_CP012375.1\|WP_046663043.1\|3590933_3591749_+\|DUF2993-domain-containing-protein	gnl\|CDD\|378597	pfam11209, DUF2993, Protein of unknown function (DUF2993). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.67573e-22
NZ_CP012375.1\|WP_046661002.1\|3600794_3602021_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	4.17478e-80
NZ_CP012375.1\|WP_046663054.1\|3616451_3617018_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.55985e-27
NZ_CP012375.1\|WP_066030107.1\|3615022_3615616_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	3.46773e-53
NZ_CP012375.1\|WP_066030106.1\|3614012_3615017_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	9.27882e-142
NZ_CP012375.1\|WP_046663055.1\|3617058_3619794_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.32697e-43
NZ_CP012375.1\|WP_046660474.1\|3610024_3611521_+\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>NZ_CP012375.1|WP_046660474.1|3610024_3611521_+|IS5-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>NZ_CP012375.1|WP_046660896.1|3607916_3609065_-|IS4-family-transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>NZ_CP012375.1|WP_046661002.1|3600794_3602021_-|ISL3-family-transposase
MPSNPQLKLMTELLHLEGVVVTNYQIITDIGIVLHLENMSRESQCIHCGSKTEKVHQNNELTIRDLPFGEQALYLRINRRQMRCEKCGKKFTEELNYLPKKRTYTDRFRKKIVAEVLNSDLKNTAERNGVSEQEIETMLKDLGEELITAKPQGLKKLGIDEIAMIKGKGNYYAVLVNIDTGKIIGLGEKRTEEALTEYLKHWGEEVLSQIEEVSIDLWIGYKNVAEKLMPQAQIVGDRFHVMKQVNNELDEARKEVKREAAKIKNKKNKENILAGIAKSKYALLKNEGDLVEKERKKLEEIYKVSPKLGEMHKLKEEFREVFEKNTEGNEGLFALSDWLKKAMAYFPKSCQTIRRWIDEITAYFDNRTTQGTVEGINNKLKVIKRRGYGFRNFKNFSLRCLLNWHFAS
>NZ_CP012375.1|WP_103672725.1|3599578_3600471_+|IS630-family-transposase
MRPYSVDFRQKIIDVWKKEKISIRGLAQRFDVAKSFIQKLLKQHKETGDIRPRPQGGSPPTKLNSEQLIILIEIIESNNDATLEELSDLLYEKTQVKVSRATLGRLTQKLNYSFKKKTLHAAEKESDRVQQKRVEYWSQVREIEASKLIFIDESGVNLALLRLYARALIGRRDRGRKPQKRGRNISIISAISLEKVVASVNIYGAVDAVTFEGFILKEVLPKIKEGDCLLMDNAKIHLGEMVREIIEQEKARLIYLPPYSPEFSPIENFWSKVKAILRKLKARTYKDLIEGIELAML
>NZ_CP012375.1|WP_046663047.1|3596828_3598994_+|O-linked-N-acetylglucosamine-transferase
MSWQNEVKTALENNQYDIVSQFYEELIERETTEISHYWYLGLAYLLEDREEDAQATWLLVLSQAAESELSGWIKTLTQILDAEATRQENSQRLETSYLIRLHLQNLNPSFLNNLLHLMELEIQFQIFAMEKCHDWCVFELLENTATAAINLDLLLRVTEKVLIYPCTDTIHFLELAALHINNPEIIATKVISAIVNYAYQQKQSVFAINLVELCLRFLPEDLYLQNSLFNLYKTTTIDYKKSLEIADNFYKSCQTTTEKLLGISLVIAISQAKGDWGNLPKFIDELIQLIERQINAKQFNARPFIIDSILGVTICLPYYQDNPKINRYLQSKLAEIFQADVRTRYNYIAPVSSPKSPARKIKIGYIAYTLRRHSVGWLSRWLFHYHNRDKFEIYTYFVNQAADEITEKWFINNSDYSYNLPAKIEQITAQIRQDNLDILVDLDSLTNNTTCLVIALKPAPIQVTWLGLDASGIPAIDYFIADNYVLPENAEEIYSEKIIRLPNSYLSVDGFEVGVPTRRRTDLNIPDDAIIYLTVQSGLKRTLNMIYLQLQILQQVPNSYLLIKGFADKETIRELFLKSADELGISQDRLRFLPNDFNEETHRANLGIADIVLDTYPYSGATTTLETLWMGIPLVTRVGEQFAARNSYTFMKNAGISQGIAWSDEEYVQWGIKLGLDKNLREEVRWKLRKSRHTSPLWNSKQFTRNLETAYQQMWNIYCQS
>NZ_CP012375.1|WP_046663046.1|3594657_3596811_+|O-linked-N-acetylglucosamine-transferase
MSWHSQVEPAIIQGDFWQVSQFYEELIEREPLEISHYWYLGLAYLLEAREEEAQTTWLFVLSQGDEQEMNSWTVDLVNILDGEARRQVEVKNWQLSWVIRQHIYQINPDNLENLLYLVLLEIKLEYFYPQKLKDWQIVDLINSDKLENFDINLLLHTIYKLLDWPAQEVLDIIITLLKIDSQQSAILEIIEQHIEKIYYTDKTNAVILTLSCLDIIPDHLVLLHKIHQYYIDTGNFELALETANKIKNLSNDKAAKLYGIYLLLYTEILAGNWLNIDNKTQEYYQAIQNNLERGQCPMSNQAEVISITSPLAYLKDDLVGNRWLTNQLAKLFQEAVRKRFNQVTIESQKPKDVNKKLNIGYIAHTLRRHSVGFLSRWLIHYHQRDNFNIHLYLVNQVEDDITEQWFKNKVDKYNNLPANPQIIAEKINQDNIDILVDLDSITKDNTCRVMALKPAPIQITWLGLDATGIPAIDYFLVDNLVLEKNAQEFYQEKLWRLPNCYLAVDGFEIGIPTLTRQDLNIPADAITYLTLQVGLKRNPATIRLQMQIIKAVPNSYLLIKGAGSEKLINDLFISIAKEEGIDENRLRFLSGVANEEIHRANLQIADVVLDTYPYSGATTTLETLWMGIPVVTKVGQQWSSRNSYTFMTHGGISEGIAWSDEEYVQWGIKLGKDEQLRRKVIAKLDESRQTSPIWNARQFTKDVENAYRQMWQIYCES
>NZ_CP012375.1|WP_080949780.1|3593835_3594318_+|cytochrome-c
MSYIILHLPISSSGGGILGQKVAKCKEKLIFPSAACVNSQLVKPKFGLYRFLMVIIVVLFLISTFLITFHLAKMSDPYIKEVLSRQGNVSRGYEIFQINCAACHGQFADGIVGPSLEDVSRRKSRISLIEQVISGKTPPMPKFQPDTQAMADLLVYLENL
>NZ_CP012375.1|WP_046663045.1|3592745_3593807_-|mechanosensitive-ion-channel-family-protein
MNLLTRLEDWPYIILPITIVLSFLLLGWLVEQRVVSQLLSIAREKNLRFSEGVLRSLRGLSILWFGLLGLNIALSLPNLPLFPSLILLSQKFLLVAFLASATWAIAQLSVEILRVYTTGDDGISSLTSLFEFLAKVLIFSCGFLLILSSVGISITPLLTAFGIGGVSLGLALQNTLANLMSGINIITSKKVRPGDYIELRTGEAGYVRDVDLRCTVVEEITNNLLVIPNAQIISSSFRNYSLPDHSLLVPVEVGISYDSDLEKVEKITREVIQEITQLLQPNLGDYQPLIRYGKFDYYSILLTVYLKVVEEEFFQHLTIKHEFIKLLHRRYQQEGIKIPYPIFFPYPPTNPPS
>NZ_CP012375.1|WP_046663043.1|3590933_3591749_+|DUF2993-domain-containing-protein
MEWLTITLASVLTLLTPAGAIIDRVLADILRSQVQKVEQLAVRVDNTPNYQALQGKIDRVRISARGIYPLADVRIEKIELETEPISLDLRRLQQKNGNLAASLRRPAAGALHLVLTETNVNQALQSAAVKGPIQTLINNLIPSREEFGITKYQFSQANFNFLNNNRVALRLQLETQRLDEPAASLDLSLEVGFKLVQGRKIELIDPTATLNGRRLSSRLLKGFAEGISTQLDLKNFEKQGIIARLLQLQIDDDKLSIAAFGRIEPRSGNPN
>NZ_CP012375.1|WP_046663042.1|3590683_3590926_+|hypothetical-protein
MNYPIPTTPEEIAALRQRPVDEEMIAAVIAGIIRMARAQGQSLNDLTEEILAEDQVLDQVQRRWLSQLLTNAWQNLAEWV
>NZ_CP012375.1|WP_046663050.1|3613727_3614000_-|CRISPR-associated-endonuclease-Cas2
MYFVISYDISDDKRRTKIHNTLKSYGQRVQYSVFECDLTDTQYAKLRGRLSKLIKPDTDSIRFYFLCACCRGKVERIGGELPRDNTIFFV
>NZ_CP012375.1|WP_066030106.1|3614012_3615017_-|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTVYVTREDAFLGKNDERLTVKASKETILDVPLLNVEGVVLFGRGSLSPALVIELLERHIPLSFVTVTGKYLGRLEPEMTKNIFVRRAQWQAAGDSPKAIHLVRGFVRGKLKNYRNILLRRQRDRKELDLQTAIACLEAAIGSIETTSAIDSLRGLEGAGSAAYFSCFDSLILGDTFTFASRNRRPPRDPVNSLLSLGYALLRHDVQSAINLVGFDPYLGYLHYQRYGRPSLALDLMEEFRAIVVDAVVLNGVNHPYLTPEHFTTEPLSGAVSLTREGLQIFLRLYEQKKQSKFKHPVMSKQCTYQEAFEIQARLMAKYLMDETDKYPPLILK
>NZ_CP012375.1|WP_066030107.1|3615022_3615616_-|CRISPR-associated-protein-Cas4
MDESDYIPIAALNHYAYCPHRCWRMFVAGEFLNNSYTIEGTNLHERVHTVGAGNREEIWQIRAIWLKSDNYRLIGKADLIESHDGEFIPVEYKRGSKGEWDNDELQVCAQAICLEEMTGKKLDTGYIYYASSHQRQPVAIDLALRQRAIATIRAIETLIQTGKMPLAVYSPRCKGCSLFDRCLPRLTEKVQRYQEED
>NZ_CP012375.1|WP_046663053.1|3615618_3616452_-|CRISPR-associated-endoribonuclease-Cas6
MPYSLVLNLTPRSPIYPNFLTGRHLHALFLTLVSSVDQELGNILHASDADKAFTLSPLQMQSRRKTINFPRWRHEREIAPETPCWWRISLLDDRLFGKLTPLWLNLNPKQPWHLGSADLVITSVLATPQSVQPWANSCTYQYLYENASETNREFDFLFATPVTFRQGKFDSALPTRELVFNSLLSRWNRYSGISFDSIALESIFPSFFDIQTKLTDEAYKNQSIGCVGEIHYRLLGEVEPAKIKAINALADFALYAGVGRKTTMGMGMTRRISKDKR
>NZ_CP012375.1|WP_046663054.1|3616451_3617018_-|Uma2-family-endonuclease
MTLISSKSLTLPEFLSLTPPDGDITYELVDGEAIPKMSPKFFHSRLTGALFLLLDRWNQGRGEVGIEWAIVLSKNDRDWCPVPDLLYISPERLGDITLTDEACPVPPELVIEIISPEQSFSSLSEKAVDYLKAGVSRVWIVDPQAKQITIFYPDAPPAIKKGDDEMSDILLPDLTLTPGQIFAKARLS
>NZ_CP012375.1|WP_046663055.1|3617058_3619794_-|CRISPR-associated-helicase-Cas3'
MSKSNPQPFFKFGRVFFPGEPTIAPDKILFQPLGNHVGNVRQLARKWQDGNFSLERVIEGINLHDKAKPQTFKIRVETNKQGEFTKYTYSFKGHRFKVDNPQNLWVQALARGHHDYSTKEIIKDTYQLKKDTEYQKIFSKDPLQYAKELYILEMCDQIEAELACRVIGDDEQAKSRTFMDFTITKGTSEDSNHRVFYLDPYPFKEPTITLNFRSWTYNLSDEDKNQLQQLHENRKDKELGSKLNTLVKEWWKKNEHTISEDRAITAIIKPDNSNTYSPSEKSENAIFWWYEELANFQPNPMQEEVFQTMVKNQHPAFILKAPTGAGKFEAIIIPFLAMLSTKEDRPRLIIPLPARSLLEDQKQRCDKYLKQFSLLHKGREVSLVIDTGTEMNRYVYLDGEVKSSNNSRRHLYKGDIILTTIDKFIYRYFGYGDKQKSFIFPYRIYHGNTLICFDEAHTYDDISFTNFCSLVKALYEAGCSLVLMTATLSQNHLERFDYLADNMIDYIDVQDNLEKLNNFYQQILKQDYSNLKQFEFYEEPTNLQQKLTSIALEEWNSNPSHRIIVSVETVKDAIAIYEKIKQTLNIKFSEKKEFLFLYHGRLSDIPKTSHYSRTNLYQRLKERDENDQAYILVTTSAIEVGCDLNSTRLITQLCNPESLIQRAGRCNRKGNVEDAKIIVIGNNIPEFVNTLSEAELENYKTILKGLHDQNFDPKAIMNCVSTKQTIDDYRVVELFSLLQDYVYNADLTCQSAHEKGLVITRSWTPSVTLVYDDGKQGDSLEKIVKESPQIQVSIDRLILKKNNEGNYTNQYANVSVYEWIYDKEETRYKLEPLKYWGCAYSKELVIKVCAVQEGAISDSFEPYSYDHELGFKDLPGVFIKWRSNGYQERLQYNPTKDRSVVINYTSALTQD
>NZ_CP012375.1|WP_046663056.1|3619786_3620611_-|hypothetical-protein
MYCLTFKIIPTAAMTFRILPGSILNIATYPFVPPTTFSGFLRRIVMLSEGLDIPETSINKENPPYFTLPRQYIALGAYPVLDKWSGVHRTHRKGTRSFNHDVFSRLYIDGDRENFQLHTWEYFIAEELIGYVVSESKSSLEAFSNLQGVGCKIGKEGFAVIDEVSESIRLQRKILSAHPSTVVPMEALIQRNPCINRCDIYNLYRHEWSADQTQDEDKGLFDTERSPINGFIPFVAAYYPEKAHPLPTLDFYTDGNLQIPVALVELLQRESINV
>NZ_CP012375.1|WP_012266052.1|3620614_3621508_-|hypothetical-protein
MATESKVTTGLPKTDANKPRLHFDIYAILEGSQELYLGHEVQVNVNLVEIVKLSTKDGKEIEKCYISPTKRRGVERRCLLWSPVKSGELLGDKQNCGIPKTCAEPTCPICATFGALDPGKRTLIGRVTHGGGVAIQEIYPVEKQRAMHPALLVNRNDETPTPFRREYNQPGILYPVYNHALSITDQDFSAVAYAFLDSLPRIGSGNPKGIAIAETDDRTPLLVLDRYLSPRGKRPIVSPSETDPQKAINDFLYLALYPETNFTNHIQEAHFDRWIGNEALAKLQEYSAIFVDTVLQA
>NZ_CP012375.1|WP_066030108.1|3621510_3624042_-|hypothetical-protein
MSIKQLSLFENVSPEQDTKAVTTSEEISELEITILLSALTANAIAQTDSTLISALADDPRAIAIAKTFDCPKLVRQLRLSQPQKESEFIKPTFQGNQVFYREREIGEIQLVYKSPSPGELQAKLTHESTIDRFLEFLQKKYQIVSLHESNYHVQIFIPQTQQSHNIEELWIEFITKVIFSIYGDFQYQLSGLMQTFITMLKSVTLAGRGFSTLEIPIITRDQAKVLAAFYLAIFEQVKDRQEKRETEIVQLIEKIKSEELNSKDLESTEKKLKSKQEMQAKEFNKYRDYFQKVLSKLLDEQRAIYHERRNLDEQLGKTGLSKAQVSKLQKQKDKIESQIIFQEDSIEEKQRFLEESDGNPFKFIEKQKQTDLLKPIQAIAKSFNKTATEQINSTRGDIFTQCILEMYRLLENPKLETIPEPLLTINPKILAARTAGDDGKDFCYSCGVTLDAKTVRWRVARFMFERPSQRRQSSSSEDRPFICSSCSVLSFASPLKVTDDSIILRLESQDDRGVTKVKIKDYLRMLTNKEVHLSSGCYIALTSEKTITGDTASKKLGQFQYALAKVASIFPLEVIKDFKFVLQLQRTEKVLVSRQLIFIKGLIEGYDQSIIVSGKDINLKLGDAIRYVQQDSPYLADYTLLKASSISDRLLLERVREQYLQTIIQDIQGETMTIDSLWKRAKLYEDVAALTGLTYAFAQSLESTAKKLMKPEDAEREVSKLIEKVDDPVAFSYYATLGDEKKISVQARLYHNPDNYFIYEQAKKMLENKLEITNREEVDNSGKKWLVFYADDITKSYAYFANPDQVGNYAQEKEWKNLTYNLKLSLYTRFPELVRKLSSKGDK
>NZ_CP012375.1|WP_158657265.1|3624129_3624294_-|hypothetical-protein
MPNLDDIYQQIERFQDQIERFQDQSELLQCQIKELRQSPVLDSEGEVRIFADLT

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Crispr_ID: NZ_CP012375_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_23

4253732-4253861

TypeV

Consensus_repeat	Method
TCTGGTGGGTTACGGCGAATACTCAATTTTTAGTGAGAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_23

>merge|NZ_CP012375|23|4253732-4253861|CRISPRCasFinder
TCTGGTGGGTTACGGCGAATACTCAATTTTTAGTGAGAGTATAACTTATTTTCGCCGCACCCACCCTACAGATGATTGCCTATGTGCTGATCTGGTGGGTTACGGCGAATACTCAATTTTTAGTCAGAGT

>NZ_CP012375|23|22|4253732-4253861|CRISPRCasFinder
TCTGGTGGGTTACGGCGAATACTCAATTTTTAGTGAGAGT	ATAACTTATTTTCGCCGCACCCACCCTACAGATGATTGCCTATGTGCTGA
TCTGGTGGGTTACGGCGAATACTCAATTTTTAGTCAGAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_002760450.1\|4246105_4246429_+\|30S-ribosomal-protein-PSRP-3	unknown	unknown	gnl\|CDD\|235062
NZ_CP012375.1\|WP_066030220.1\|4258925_4259909_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP012375.1\|WP_158657269.1\|4249151_4249310_-\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|377877
NZ_CP012375.1\|WP_002737272.1\|4251802_4252114_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP012375.1\|WP_066030214.1\|4247140_4248589_-\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|214349
NZ_CP012375.1\|WP_046663512.1\|4246649_4247066_-\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|214351
NZ_CP012375.1\|WP_002804204.1\|4252970_4253399_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372936
NZ_CP012375.1\|WP_046663523.1\|4264778_4265321_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_CP012375.1\|WP_046663522.1\|4264435_4264792_+\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|376737
NZ_CP012375.1\|WP_081310282.1\|4259939_4261157_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|274425
NZ_CP012375.1\|WP_066030218.1\|4256547_4257798_+\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NZ_CP012375.1\|WP_046663511.1\|4245579_4246002_-\|8-oxo-dGTP-diphosphatase-MutT	unknown	unknown	gnl\|CDD\|239517
NZ_CP012375.1\|WP_046663519.1\|4261159_4262119_-\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
NZ_CP012375.1\|WP_066030213.1\|4244206_4245274_-\|phospho-N-acetylmuramoyl-pentapeptide--transferase	unknown	unknown	gnl\|CDD\|234638
NZ_CP012375.1\|WP_002735746.1\|4245319_4245583_-\|DUF3134-domain-containing-protein	unknown	unknown	gnl\|CDD\|371474
NZ_CP012375.1\|WP_066030219.1\|4258343_4258898_-\|phycobiliprotein-lyase	unknown	unknown	gnl\|CDD\|312763
NZ_CP012375.1\|WP_046663515.1\|4250130_4251756_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP012375.1\|WP_066030217.1\|4253900_4256222_-\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_CP012375.1\|WP_046663520.1\|4262133_4263054_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP012375.1\|WP_046663521.1\|4263319_4264303_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_002760450.1\|4246105_4246429_+\|30S-ribosomal-protein-PSRP-3	gnl\|CDD\|235062	PRK02724, PRK02724, 30S ribosomal protein PSRP-3.	3.91121e-66
NZ_CP012375.1\|WP_066030220.1\|4258925_4259909_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	5.97542e-92
NZ_CP012375.1\|WP_158657269.1\|4249151_4249310_-\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|377877	pfam07589, VPEP, PEP-CTERM motif. This motif has been identified in a wide range of bacteria at their C-terminus. It has been suggested that this is a protein sorting signal. Based on phylogenetic profiling it has been suggested that the EpsH family of proteins mediate this function.	0.00320858
NZ_CP012375.1\|WP_002737272.1\|4251802_4252114_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.78596e-48
NZ_CP012375.1\|WP_066030214.1\|4247140_4248589_-\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|214349	CHL00060, atpB, ATP synthase CF1 beta subunit.	0
NZ_CP012375.1\|WP_046663512.1\|4246649_4247066_-\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|214351	CHL00063, atpE, ATP synthase CF1 epsilon subunit.	1.26357e-60
NZ_CP012375.1\|WP_002804204.1\|4252970_4253399_-\|hypothetical-protein	gnl\|CDD\|372936	pfam14159, CAAD, CAAD domains of cyanobacterial aminoacyl-tRNA synthetase. This domain is present in aminoacyl-tRNA synthetases (aaRSs), enzymes that couple tRNAs to their cognate amino acids. aaRSs from cyanobacteria containing the CAAD (for cyanobacterial aminoacyl-tRNA synthetases appended domain) protein domains are localized in the thylakoid membrane. The domain bears two putative transmembrane helices and is present in glutamyl-, isoleucyl-, leucyl-, and valyl-tRNA synthetases, the latter of which has probably recruited the domain more than once during evolution.	1.43466e-40
NZ_CP012375.1\|WP_046663523.1\|4264778_4265321_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	3.88413e-45
NZ_CP012375.1\|WP_046663522.1\|4264435_4264792_+\|dihydroneopterin-aldolase	gnl\|CDD\|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	6.10559e-38
NZ_CP012375.1\|WP_081310282.1\|4259939_4261157_-\|glycosyltransferase	gnl\|CDD\|274425	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.	1.47678e-56
NZ_CP012375.1\|WP_066030218.1\|4256547_4257798_+\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP012375.1\|WP_046663511.1\|4245579_4246002_-\|8-oxo-dGTP-diphosphatase-MutT	gnl\|CDD\|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	6.94662e-56
NZ_CP012375.1\|WP_046663519.1\|4261159_4262119_-\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	5.86429e-162
NZ_CP012375.1\|WP_066030213.1\|4244206_4245274_-\|phospho-N-acetylmuramoyl-pentapeptide--transferase	gnl\|CDD\|234638	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional.	5.69097e-130
NZ_CP012375.1\|WP_002735746.1\|4245319_4245583_-\|DUF3134-domain-containing-protein	gnl\|CDD\|371474	pfam11332, DUF3134, Protein of unknown function (DUF3134). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	4.66368e-24
NZ_CP012375.1\|WP_066030219.1\|4258343_4258898_-\|phycobiliprotein-lyase	gnl\|CDD\|312763	pfam09367, CpeS, CpeS-like protein. This family, that includes CpeS proteins, is functionally uncharacterized.	2.48545e-52
NZ_CP012375.1\|WP_046663515.1\|4250130_4251756_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP012375.1\|WP_066030217.1\|4253900_4256222_-\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP012375.1\|WP_046663520.1\|4262133_4263054_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	3.98326e-31
NZ_CP012375.1\|WP_046663521.1\|4263319_4264303_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	9.92131e-34

>NZ_CP012375.1|WP_002804204.1|4252970_4253399_-|hypothetical-protein
MESMQPTETKNPIRTDLPGSLSKPSSSTEQIWSEYVEPVWDSVMSYLANVPDYIGSFFSGYKKPLIVLGAILASFVTVKVTLAVLDAIDDIPLLAPILQLVGIVYTGWFVWRYLLKDENRRELLAEIDALKAQVFGSHNNTL
>NZ_CP012375.1|WP_002737272.1|4251802_4252114_-|co-chaperone-GroES
MAAVSINVTTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIKLGGEEFVLLSEKDILAAVS
>NZ_CP012375.1|WP_046663515.1|4250130_4251756_-|chaperonin-GroEL
MAKSIIYNEDARRALEKGMDLLAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGITIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAHAIVKEGLRNVAAGANPISLKKGIDKAADFLVSQIAKHSKPVEDSKAIAQVGAISAGNDDEVGQMIASAMDKVGKEGVISLEEGKSMTTELEITEGMRFDKGYISPYFVTDTERMECVFEDPAILITDKKIGLVQDLVPILEQVARQGKPLVIIAEDIEKEALATLVVNRLRGVLNVTAVKAPGFGDRRKAMLEDIAVLTGGQVISEDAGLKLETTKIDSLGTARRITMNKDTTTIVAEGNDVAVKTRCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLETWAKETLHHEELTGALIVSRAIAAPLKRIAENAGQNGAVIAERVKEKPFNVGYNAATGEFSDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKSAPPAGGGDFDY
>NZ_CP012375.1|WP_158657269.1|4249151_4249310_-|PEP-CTERM-sorting-domain-containing-protein
MSFNNSTTSNSFQINATEITGPVASTPEPSVIAALSLFGLGLLGVKGRRNEG
>NZ_CP012375.1|WP_066030214.1|4247140_4248589_-|F0F1-ATP-synthase-subunit-beta
MVATTETNVGKIVQIIGPVIDAEFPSGNLPRIYNALTVKGTNSAGQNLSVTCEVQQLLGDNQVRAVAMSTTDGLVRGMDIVDTGAAISVPVGKCTLGRIFNVLGEPVDEKGPVNVTETSPIHRPAPKLVDLEVTPTVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESKVINADNPEESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQADIVGDEHYGTARAVQSTLQRYKELQDIIAILGLDELSEEDRLTVDRARKIERFLSQPFFVAEVFTGSPGKYVTLADTIKGFQMILKGELDSLPEQAFYMVGNIDEAIAKGEKLKKG
>NZ_CP012375.1|WP_046663512.1|4246649_4247066_-|F0F1-ATP-synthase-subunit-epsilon
MSITVRVITPDRIVWDNVAEEVILPSSTGQLGILSGHAPLLTALNIGVMRIRPGKDWENIAVLGGFAEVENNEIKVLVNGAELGSKIDKEKARAEYEKAQTRLDEVSKGDDRRKTIQAQQSWRKARARYQAAGGLVSV
>NZ_CP012375.1|WP_002760450.1|4246105_4246429_+|30S-ribosomal-protein-PSRP-3
MTVSSESKFILKVLWLDQNVAIAVDQVVGKGTSPLTAYFFWPRNDAWQQLQEELEAKHWIDESDRVDVLNKATEVINFWQELRNQGRQIPMADAQLKFPEVVFSGSN
>NZ_CP012375.1|WP_046663511.1|4245579_4246002_-|8-oxo-dGTP-diphosphatase-MutT
MIPETDSLASKQIGVAVIRDDRDLILIDRRLAKGLLGGFWEFPGGKIEGNETVQECIKREILEEIGIEIAVDSHLITIDHTYSHFRVNLQVYNCRYLSGEARAIECEEIRWVTIEELDHFTFPAANQEIIRALKDMVNSK
>NZ_CP012375.1|WP_002735746.1|4245319_4245583_-|DUF3134-domain-containing-protein
MIAVNRRVIMLNPSIRQEPRYEPAAVIPLKKDASIVEWLEKNNRMIPRDKIAEPDLTLEEDVELSELMDVDDIGYDDDEDELVLDED
>NZ_CP012375.1|WP_066030213.1|4244206_4245274_-|phospho-N-acetylmuramoyl-pentapeptide--transferase
MNANIFSAPIFKKPTGTHLLILLTGLLFLLVVFFQSTNSLLLPLMATTLISAGLGCQVVPMLRRLKMGQIMREDGPQAHLKKAGTPTMGGSFFVPVALIFALIWSKFTPNVVAVALLTFAYMGIGWLDDWQILRYKSNKGLSPQMKLILQITGALLFCLWMSFNQVSTNIGLWGRLVIPLGFFFWILAGFVLVAESNATNLTDGVDGLAGGTGAIAFLGLGIIIAPSHPDLAIFCTCFAGACLGFIFHNRNPAKVFMGDTGSLALGGALAAVGLITGHLWGLFLISGLFFLESLSVIAQVIYYKATKGPDGKGKRLLKMAPFHHHLELSGWTETKIVGAFYLVNALLVVLAIWTS
>NZ_CP012375.1|WP_066030217.1|4253900_4256222_-|DNA-helicase-PcrA
MTVTADYLEQLNPSQRLAVEHFCGPLLVVAGAGSGKTSALTYRIAHLIRHHGVDPENILAVTFTNKAAREMKTRIEKTFAQQKAQEKYGQRLELLEEYEQKKLFSQVYRNYTKKLWIGTFHSLCGRILRYDINKYQDEYGHSWQRNFSIMDESDAQSLVKNIVTKQMNLDDKKFDARNLRYAISNAKNLGLTPRDYARENPHFRGKVISEVYQAYQMQLAQNNALDFDDLILVPVRLFQQNESILGYWHTQFKHILVDEYQDTNQIQYELIRLLSTNGETKKSEWNWTDRSIFVVGDADQSIYSFRMADFTILLNFQADFGDGLPDDDTRTMVKLQENYRSRENILQAANKLIENNSQRIDKVLVPTREGGESIYVFKARDEQEEASFVIDKIREFTQENPELNWGSFAILYRINAQSRPFEDTLIRNNIPYNIVGGFKFYDRQEIKDAIAYLRVIANPADTVSLLRIINTPRRGIGKTTIDNLLKAAQELGVPLWEIISDETSVNTLAGRATKSINKLAKIIQNLQEKITDLSASEILDKIMEDSGYIDELKQQGTEEADTRIENIQELYSAVVQFQEENEETNLQEFLANASLASDLDNLQEGQEKVSLMTLHSAKGLEFPIVFLVGLEQGIFPHNRSLNDPIALEEERRLCYVGVTRAKEQLFLTYAKERYVWGNKETKVASQFLQELPPELLTSNLKPKKTPKVVPIQTTASNQRKWQVGDRVLHSTFGEGEVTHILGTGKKMNLAVKFSGLGQKIIDPRTAPMQLIHE
>NZ_CP012375.1|WP_066030218.1|4256547_4257798_+|methionine-adenosyltransferase
MSKRYLFTSESVTEGHPDKICDQISDTILDALLSQDDHSRVAAEVVVNTGLVLITGEITSKAQVHFVNLVRSKIAEIGYINADNGFSSNSCTVLVALDEQSPDISQGVTAAQENRELLSNDELDKIGAGDQGIVFGFACNETPEFMPLPISLAHRIARRLAAVRKTGELSYLRPDGKTQVSVIYEDGRPVGIDTILVSTQHDATIGDITDNDLVQQKIKSDLWEAVVQPVFSDLEIKPDANTRYLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLADKCEIQVGYAIGVARPVSVFVETFGTGKVADDVILDLINKYFELRPAGIIQTFNLRGLPSERGDRFYQDVAAYGHFGRNDLDLPWEKTDKAAILKEALTSAVV
>NZ_CP012375.1|WP_066030219.1|4258343_4258898_-|phycobiliprotein-lyase
MNTEIFQQFFAYCVGSWQTERTYHYLAAQEVERSRTEFLIQPLTREIKQKVLTDNNYPDIADLESIPGFNLGFYTISEKGEEVRQNLNLLFVVKAENNGYLEGDYLRDRAYEEARPIISAFRFDSTTRELLMTTNYTRSVSVDSITLINPDLRIRKIINYQRPQQGEPLEKVLLVGFGVECKVS
>NZ_CP012375.1|WP_066030220.1|4258925_4259909_-|glycosyltransferase-family-2-protein
MLSNQIPVKISVVVPLYNEEENIDVLFRRLLAVLETINTSYEVVCVNDGSRDNTLKNLVEYHQRYPQIKVVNLSRNLGKDIAMSAGIDYSQGMAVIPIDTDLQDPPELIAEMIEKWQQGYDVVYASRRVRIGESWLKRFTAEGFYQVINKLSRVPIPPNTVDFRLIDRRVVESIKKMPERQRFMKGIFAWVGYKQTSILFDREPRYQGQTKWNYWKLWNFAIDGITSFSFLPLKVWTYVGFIIALVSLVYASFLMLRTIILGIDVPGYASLMVTVLFLGGIQLLTLGIIGEYIGRVYEEVKGRPLYLVRDCYGFENREQVTDKITQN
>NZ_CP012375.1|WP_081310282.1|4259939_4261157_-|glycosyltransferase
MNILMISSTFPYPPSKGGTQGRTFNLLKYLSKNHDITLIVQRTADVSDEEVEKLGKFVSELVVFPRPRDAKTGIISKLHRLAQFLQTGTPPNVLFGYSQEMQNWIDRAVKSQKFPVITSEHSVNEIYIRPQWKQQIRTVIDVHSSLYQTGKSQLEIGVSSQELRDSLYLPLLRRYEQKTVQKFSKIVVTTDDDQKQMEEFAPNGEIYLIPNAVDLDLFPYRTEDPSGHNLVFIGGLDYWVNIDAACFLAREILPRIQITYPDTTLTLVGANPSLEVQELTKLKGVIVTGRVPSMTTYLHQATVAVIPLRTGFGMKFKTLESMAAGVPVVASDRGLEGLTVEGNNVPLAALRANSIEEYCTAISSLFESAELREKLSRNARKLIEDNYTWQQAATKYEQVLVADIC
>NZ_CP012375.1|WP_046663519.1|4261159_4262119_-|GDP-mannose-4,6-dehydratase
MSKKALICGISGQDGAYLAELLLKAGYTVCGTSRDAQMSSFSNLKRLGIKEQVKLESMALNDFRSVLQVLIKIQPDEVYNLAGQSSVGLSFEQPVETLESIATGTLNLLEAIRFTGAKIKLYNAGSSECFGDIGDNSADENTPFRPRSPYAVAKSAAFWEVANYREAYGIFACSGILFNHESPLRPERFVTQKIIAAVAKIARGSPDTLHLGNMDIQRDWGWAPEYVEAMYLMLQQEQPDDYVIATGESSKLEDFVATAFATVGLNWQDHVISDRSLLRPTDLAISRGNPHKAKEKLGWQARYKMTDIVRMMVENRLEE
>NZ_CP012375.1|WP_046663520.1|4262133_4263054_-|glycosyltransferase-family-2-protein
MAPKIAGIICTYNRDHYLAAAIDSLLAQTCPDCEILVVDNASTDKTRQVVESRLGDGRLKYVYEPILGLSTARNRGAKETRAPILAYLDDDAIASPQWLQILLNAYENNQKLAVAGGKVTLIWPQGYSQPNWLSDQLAGGLGAFDLGDNVVYISQADLTPRGVNYSIRRDFWEKIGGFDPNLGRIGKKLLSNEELYTTELALAQGWQVGYFPAALVEHNVAPERINRQWFMRRSWWQGISEHYREEVAGKTGLAQFGRGGERLVRGLVKSVKFINDPAKSFDNLLYAYGQIGYLSEAAKAMLNPQK
>NZ_CP012375.1|WP_046663521.1|4263319_4264303_+|glycosyltransferase-family-2-protein
MPKVTVCIPTYNRADYLSYSINSVLGQTYEDFELIVCDDGSSDRTPEVVTAFQDSRIIYLRHPQNLGRSLNMRSGFTAARGEYFIKFDDDDGLTPEFLAKTVPILDQEKNVDFVCTDHWIIDKFGQKVTAATQENSAKWGKDRLQKGIIPDLERQTFSYQSLQVGSTLFRYQSLADVDYMRPQADGCEDFDLLVRLALVGKQAYFLPELLMEYRFHGGQTSLKQAVHFLQAKLFCTESYQFNDLKLEEERVKKAAFLQESLGIKLIEKGETEAGRFLIEKASKLSGKSRRARLGLLLSYLPLNLRQLAFQGFRQLRPKDYAEQVRAV
>NZ_CP012375.1|WP_046663522.1|4264435_4264792_+|dihydroneopterin-aldolase
MDTIHVTGIRAYGYTGYLAEEQVLGQWFEVDLSLEVDISIAGKSDAIEDTLDYRQAIEIVKHQIETSKFALVEKLATVIAEDILKLEGVRQVRVQLSKPAAPIPNFTGKITIDITRSR
>NZ_CP012375.1|WP_046663523.1|4264778_4265321_-|NAD(P)H-dependent-oxidoreductase
MIKIVGINGSLRSGSYSAMALEVAISRLGALGVETEIIDLRKLSLPFCNGGDDYSDYPDVAKMQQTVKSAAGLILATPEYHGSVSGVMKNALDLMSFEELSGKVAGLISVLGGQSNSNALNDLRIILRWVHAWVIPEQISLGQAWKVFNEEGKILDEKLSQRFDAFAQSLVDNTRKLNEI

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Crispr_ID: NZ_CP012375_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_24

4278915-4278996

TypeV

Consensus_repeat	Method
TTCTCAAAGAACAATCTTTAAAAACCGA	CRISPRCasFinder

1 spacers

cas14j,RT

The CRISPR arrays of NZ_CP012375_24

>merge|NZ_CP012375|24|4278915-4278996|CRISPRCasFinder
TTCTCAAAGAACAATCTTTAAAAACCGAGCGACGCTTTCAAGAAACCGAGCGCATTCTCAAAGAACAATCTTTAAAAACCGA

>NZ_CP012375|24|23|4278915-4278996|CRISPRCasFinder
TTCTCAAAGAACAATCTTTAAAAACCGA	GCGACGCTTTCAAGAAACCGAGCGCA
TTCTCAAAGAACAATCTTTAAAAACCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046660511.1\|4285579_4286569_-\|transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP012375.1\|WP_046663526.1\|4268944_4270036_-\|RIP-metalloprotease-RseP	unknown	unknown	gnl\|CDD\|308008
NZ_CP012375.1\|WP_046663533.1\|4280324_4281740_+\|precorrin-3B-synthase	unknown	unknown	gnl\|CDD\|236573
NZ_CP012375.1\|WP_046663535.1\|4282372_4283077_+\|precorrin-2-C(20)-methyltransferase	unknown	unknown	gnl\|CDD\|180341
NZ_CP012375.1\|WP_046663525.1\|4268288_4268945_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP012375.1\|WP_066030221.1\|4272296_4272944_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046663542.1\|4291772_4292429_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236608
NZ_CP012375.1\|WP_046663530.1\|4276781_4277216_+\|endonuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|238509
NZ_CP012375.1\|WP_046663524.1\|4266429_4267689_-\|transposase	cas14j	-	gnl\|CDD\|223747
NZ_CP012375.1\|WP_046663527.1\|4270185_4270749_+\|phycobilisome-protein	unknown	unknown	gnl\|CDD\|381268
NZ_CP012375.1\|WP_046663534.1\|4281749_4282376_+\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|181352
NZ_CP012375.1\|WP_046663536.1\|4283388_4284537_+\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NZ_CP012375.1\|WP_052734211.1\|4287300_4289061_+\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP012375.1\|WP_002737239.1\|4271973_4272225_-\|BolA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223349
NZ_CP012375.1\|WP_080949794.1\|4277467_4278736_-\|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	unknown	unknown	gnl\|CDD\|225151
NZ_CP012375.1\|WP_046663538.1\|4284603_4284960_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP012375.1\|WP_002747500.1\|4270928_4271519_+\|fibrillin	unknown	unknown	gnl\|CDD\|309752
NZ_CP012375.1\|WP_046663541.1\|4291107_4291659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046663529.1\|4273174_4273756_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_046663532.1\|4279504_4280140_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_046660511.1\|4285579_4286569_-\|transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.7635e-33
NZ_CP012375.1\|WP_046663526.1\|4268944_4270036_-\|RIP-metalloprotease-RseP	gnl\|CDD\|308008	pfam02163, Peptidase_M50, Peptidase family M50.	3.93183e-62
NZ_CP012375.1\|WP_046663533.1\|4280324_4281740_+\|precorrin-3B-synthase	gnl\|CDD\|236573	PRK09567, nirA, NirA family protein.	7.01329e-108
NZ_CP012375.1\|WP_046663535.1\|4282372_4283077_+\|precorrin-2-C(20)-methyltransferase	gnl\|CDD\|180341	PRK05990, PRK05990, precorrin-2 C(20)-methyltransferase; Reviewed.	2.51971e-94
NZ_CP012375.1\|WP_046663525.1\|4268288_4268945_-\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	8.76857e-105
NZ_CP012375.1\|WP_046663530.1\|4276781_4277216_+\|endonuclease-domain-containing-protein	gnl\|CDD\|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	3.54072e-43
NZ_CP012375.1\|WP_046663524.1\|4266429_4267689_-\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.64945e-28
NZ_CP012375.1\|WP_046663527.1\|4270185_4270749_+\|phycobilisome-protein	gnl\|CDD\|381268	cd12130, Apl, Allophycocyanin-like globins. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC). This subfamily contains allophycocyanin-like proteins (Apls), which have conserved the residues critical for chromophore interactions, but may not maintain the proper alpha-beta subunit interactions and tertiary structure of phycobiliproteins. Indeed AplA isolated from Fremyella diplosiphon was not detected in phycobilisomes. As the genes encoding Apls cluster with light-responsive regulatory components, Apls may have photoresponsive regulatory role(s).	1.29098e-83
NZ_CP012375.1\|WP_046663534.1\|4281749_4282376_+\|precorrin-8X-methylmutase	gnl\|CDD\|181352	PRK08285, cobH, precorrin-8X methylmutase; Reviewed.	3.66558e-128
NZ_CP012375.1\|WP_046663536.1\|4283388_4284537_+\|DNA-protecting-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	2.48968e-117
NZ_CP012375.1\|WP_046663542.1\|4291772_4292429_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	1.33194e-83
NZ_CP012375.1\|WP_002737239.1\|4271973_4272225_-\|BolA-family-transcriptional-regulator	gnl\|CDD\|223349	COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms].	1.90423e-23
NZ_CP012375.1\|WP_080949794.1\|4277467_4278736_-\|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	gnl\|CDD\|225151	COG2242, CobL, Precorrin-6B methylase 2 [Coenzyme metabolism].	1.80645e-73
NZ_CP012375.1\|WP_046663538.1\|4284603_4284960_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	2.79984e-52
NZ_CP012375.1\|WP_002747500.1\|4270928_4271519_+\|fibrillin	gnl\|CDD\|309752	pfam04755, PAP_fibrillin, PAP_fibrillin. This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins.	2.26735e-67
NZ_CP012375.1\|WP_046663529.1\|4273174_4273756_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.70848e-34
NZ_CP012375.1\|WP_052734211.1\|4287300_4289061_+\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.59644e-123

>NZ_CP012375.1|WP_080949794.1|4277467_4278736_-|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE
MADNEIVAIFFNMADRNCKSKWLSIIGIGEDGLEGLSSVGRSLLSLASVIVGGERHLAMLPPEDQRQKLLWTSPIQDSVNEIIRRRGQSVCVLASGDPMCYGIGVTLTRQIPLEEMTIIPSPSAFSLACSRLGWSLSEVETLSLCGRPPACLNGVLYPGAKLLVLSADAQTPALAARLLREGGFGESSITVLEHLGGTRERHIQGIANDWQFTDLADLNVIAISCISSHPPTLAPRLPGLPDSAYHHDGQLTKREVRAITLSRLAPLPGQLLWDVGAGCGSIAIEWLRSDRRCQGIAIEHHPTRLQYIADNAAALGTLHLQIVAGIAPSALEDLPQPDAIFIGGGITTPHLLETCWLALRPGGRLVANTVTIESELVLLQWHSKLGGELLRIGIEKAEPVGKFLGWKAMAPVTQWTVLKPRL
>NZ_CP012375.1|WP_046663530.1|4276781_4277216_+|endonuclease-domain-containing-protein
MQLTNHHHLPYNPKLVERAKELRKNMTKAERKLWYEYLKNFQYRVHRQRPIDQFIVDFYCPELKLVIEIDGDIHNREDAQNYDLERTQILSGYGLTVIRFTNQEVLSNFEGVCGVIGSLIPPTPLDKGGFDPSLLRGFDPPNPP
>NZ_CP012375.1|WP_046663529.1|4273174_4273756_+|Uma2-family-endonuclease
MSLSLITRKFTVEEYEKMTTEGIIKPDEKVELIRGEIIKMSPMGTRHAACIARLTQLFYRKFGDLILLGVQNPIRLNNNSQPEPDLSLLIPRSDFYVAAYPCPQDIYLIIEVSDSTLDYDRYTKIPLYAEANIQEVWIVNLKEECLEVYRHPLHGSYQAIQKYYRGEIIFIESFPAIELTLIEILGNKSEIKG
>NZ_CP012375.1|WP_066030221.1|4272296_4272944_-|hypothetical-protein
MLKKIAVPMGNIKSRNFMVKRKQPYSLIYLLTLVIGLVIAIAPDGQAQTPDSNTPASDPNELKPLNQADSVLSLQGGQRLVEEANAAINAAKYSVAVDKLNQARRIFNQLSNYHLQLANSFSGIDPKVFDSQRQSALNTGQMRDEATYKLALVHRAQNQPELAVPLLIQVIQSQNPTSELGQKSYQQLYEMGFVSTPISAPTPTSATPNNSPPRQ
>NZ_CP012375.1|WP_002737239.1|4271973_4272225_-|BolA-family-transcriptional-regulator
MVDFRQVEAMIQEQIPDAQVMIRDLTGGGDHLEAVVISGEFAGKTRVKQHQMVYGALQSALATEAIHALALKTYTPDSWAAEK
>NZ_CP012375.1|WP_002747500.1|4270928_4271519_+|fibrillin
MDAKAKLLELIAGRNRGLLATESDRVRILAAIEQLEDHNPHPHPLEVKQLLGGNWRLLFTSSRDILGLDRLPFFQLGQIYQYLDLNKAKLYNIAEITGVPWLEGAVIVAATFEPTSERRVMVKFERSILGLQRFLNYHSPQEFIDAIESGKKFPPLDFSFNNREQKGWLDITYLDEDLRIGRGSEGSVFILAKEKT
>NZ_CP012375.1|WP_046663527.1|4270185_4270749_+|phycobilisome-protein
MPLSERAQQLIPKARIISFANWPYQQAAIAVWQQADDLNRYLSDSDLDTIVNLEPDLLVSSQQARKLRYNANSIVDNARQALLSQFPTILQPGGDLHPPHRAEACWRDFWNFLRCITYGVAGQQIPYTSAEGLENMRLLYQELQVPLGAMISGLEALKQYSLDYFSDSEKTAIAPYFDHLITVMKKF
>NZ_CP012375.1|WP_046663526.1|4268944_4270036_-|RIP-metalloprotease-RseP
MSVLIAIGVLALLIVVHELGHFAAARWQSIHVNRFSIGFGPALAKYQGKETEYALRAIPLGGYVGFPDDDPDSQIPNNDPDLLRNRPVFDRAIVISAGVIANLIFAYFLLVTQVATVGFPQINYQEGVIIPEVFTAENSVAKQAGMKAGDIVLAINDQPLGASQNAVIDFRDIIQSSPDQPLKLTIKRPTETLDLIVTPELGSDGQGKIGVRLAPNGEETHLKADNFGQAFSLGAGEFQRLILLTIQGFGQLFSNFKENVQQVAGPVKIVEYGAAIARNDAGNLFQFAALISINLAVINILPLPALDGGQLVFLLIEALVGKPLPTKLQDNIMQTGLVLLLGLGVFLIVRDTANLAVFQDLFQ
>NZ_CP012375.1|WP_046663525.1|4268288_4268945_-|endonuclease-III
MAPRKKTQLQLHVLEILSNLKRLYPEATCSLNYQTPVQLLVAVILSAQCTDERVNKVTPALFARFPDAKSLAFAEREELETLIRSTGFYRNKAKNIQGACQKILKDFQGEVPKTMEELLTLPGVARKTANVVLAHAYAIIEGVTVDTHVKRLSNRLGLTTNNDPVKIERDLMALLPQPDWETFSISIIYHGRAVCKARNPACFSCQLASLCPAANSKQ
>NZ_CP012375.1|WP_046663524.1|4266429_4267689_-|transposase
MITLTYQYKLKVNRQQEREIVHILDVGKSVYNYALSERKDWLNSRKCLADRCSLVSEYIIPADEPYPNYFVQAKNLTEAKKVYPILKTVNAQVLQQVLKTLDKAFDRMKSKGFGFPRFKKKMRSFVFPALSKNFLGDEYLNFPQLGKIRIRKSREYPSGFEPKQAQIIRKASGFYVSVSFKSQESVPDITAGKTCLGIDAGIESFVATSQGYLIKAPRFLLKVQSKLKLLQRRLKHQVKGSSNWLKIQEKIARLHEKVSNTRRDWHFKLSHYLCDLADNIFVEDINFVSWSRGIVRKQSLDSGIGSFINEILPFVVWKRGKYYLKVDKNGTSQECPNCGAITGKKALSERVHRCNFCGHIEPRDTASAKVIENRGKNAVGLTVLENARGGDLTGIDRLNQVDLVKSLRTENPPLHRASG
>NZ_CP012375.1|WP_046663532.1|4279504_4280140_+|hypothetical-protein
MTTTADDVWKLLAELVEAQKETERCFQETERRFQETERILKEQSLETERILKEQSLKTDRQITRLSKEIGNLGGKWGRFVENMVAPACETLFLNRQIPVHQVSQRVRKRLDGKTLEIDVLVTNENHVLVVEVKSSLSVDDVKELIKNLTEFRQFFPEYNQKQLYGAVAGIEIEEGADKYAYRQGLFVLAQRGENVAILNDTEFQPKTWYDP
>NZ_CP012375.1|WP_046663533.1|4280324_4281740_+|precorrin-3B-synthase
MNWLVEANACPGLFYGTAAQDGFLIRLRTPGGWLNSPQGKAIATWLEQWQTTIQVTNRANLQIRGLQKSPSLEEFQTLQKLGLAAHNPSIDHLRNIMSSPTAGIDCQESIDTRPLVQELDNFIQNYPSIAQLSPKFSIGIDGGGAVGIGTGSTMAWQHRYNEIQLSAIVLNNPKNLTSILCFRLALGGDKQLYDTDLLIEPENCLAVVKALVTVYIDYVQQNPNIKGKKPRMKHLLKDWGLTKYLEQVNYQLHRTSTGIIQGQEYQQAAHSTQPYFHLGIHPQKQPGLSYIGLSLRLGQLTANQLWGLAALSETFGSGQLRLTPWQTVILPDIPDEKVSELLPKLASLGLSASPGWDAGIVACSGKPGCAAAATATQIHASLLADYLKEHLTCNSPVNIHLTGCAKSCAQPGPAEITLLGTTIEENGQILEAYQVYMGDSQKFLETPIFEGEFTKIPPLIAQILSSQKSKI
>NZ_CP012375.1|WP_046663534.1|4281749_4282376_+|precorrin-8X-methylmutase
MEYIKNGEEIYRKSFAIIRAETNWENLPDDLAHVAVRLIHSCGMTDITEDLEASPDAVKIGRNALAGGAAILCDSQMVANGITKARLPKNNPIICTLNHPEVTELARQINNTRSAAALELWRRHLAGAVVAIGNAPTALFRLLELLDQNVDKPALILGFPVGFVGAAESKIELATNSRGVPFITLHGRRGGSAIAAAAVNALAKENEL
>NZ_CP012375.1|WP_046663535.1|4282372_4283077_+|precorrin-2-C(20)-methyltransferase
MNKLGKLYGLGIGPGDPELLTLKAHRILTTVPVIAYPTLESGKVLARAIVSDFIRPEQIEIPMPLPFSVERSSQPHYDIAAENIAEHLNLGRDVAVLCVGDPMLYGTFMYIFNRLCDRFSIEVVPGISSVMASAAMLGVPITYRNDVFSIMPATLKAEILRDRLAFIDAAAIIKLGRHFAKVRDILEELGLLERALYIERATLPNQQIIPITEVDPEAATYWSLILIPSKTKPQ
>NZ_CP012375.1|WP_046663536.1|4283388_4284537_+|DNA-protecting-protein-DprA
MTDDRVYWLAWSSIAGVGPISLKRLYQHFGSVAVAWNASDSAIAEGAGFGKKLMVAVREGRSQIDPEALFAEHIQKNPLFWTPSDPEYPRFLREIPSPPPLLYYQGKVNLEENQGNIPTVAIVGTRNPTDHGRRWARRLSTLLAQQGFTIVSGMAEGIDGEAHQSCLKAGGRTIAVLGTGVDVVYPSRHRQLHADIQKQGLVISEHPAATQPNKAHFPSRNRIIAGLSRATIVIEAPERSGSLITASYANEFGGDIYALPNSPDIAAARGCLQLIHQGAEIIVSEEKLLEMLGAIPTTNQSAPLNLSPSLPLETSPAVNAAPPVNLEPRLAQVYQLFDRDALLFDIIVQKMQIPTSEVAGILLELELIGLVTQLPGMRYQKT
>NZ_CP012375.1|WP_046663538.1|4284603_4284960_-|thioredoxin
MSEVPAVTDANFKVEVLDSTDLVLVDFWAPWCGPCRMVAPVVAEIAEMFIGKVKVVKLNTDENPNIASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLANTIDKHLKPDDPQKGSKS
>NZ_CP012375.1|WP_046660511.1|4285579_4286569_-|transposase
MKNYTWEYIQKYPKQTKRLLGIDYQQLEQLMALGKLIHRKNQSEIEKTKIRINQPGSGTPPKLSEEEQIVLMLVYLRHHLSFQILGLIFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRDYELIVDSAEQPVERPTDYQEQKIYYSGKQKRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRQTLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEGEQSGEVIDVIISHSFPSKLDFVSSNPD
>NZ_CP012375.1|WP_052734211.1|4287300_4289061_+|group-II-intron-reverse-transcriptase/maturase
MVLSSNEKVMNTATKPMYEWKDINWRKAERCVFKLSKRIFKASQRGDVKLVHKLQRLLLKSWYAKLIAVRRVSQDNQGKKTAGVDGIKSLTPKQRMALVNNLKPGNKSKPTRRVWIPKPNTDEKRPLGIPTMYERALQALVKLALEPEWEAKFEPNSYGFRPARSAHDAIGAIYISINKKPKYVLDADISKCFDKINHQKLLTKLQTYPKLRQQIKAWLKSGVMDGKNLFPTNEGTPQGGVISPLLANIALHGMEERVKQYAKTLKGNKSKNEQALTLIRYADDFVILHEDLKVIKECQEIIKQWLAEMGLELKPSKTRISHTLETYDDYVGFDFLGFNIRQYQVGKHHGAKSSKGVKLGFKTLIKPSAEKVKSHLKKLGEVVNSQKSSPQDALIKRLNPIIRGWSNYYSSVVSSKTFTDCDYYFFEKLKRWAYRRHPMKNKTWIMRKYWHTEGKDNWVFSTRGGKNPFKLARHLDTKIVRYVKVKGDKSPYDGDLIYWSSRMGKHPEMPPEKAILLKRQQGRCAYCGLYFQDGDILETDHIIPKSKGGKNNRDNKQLLHRHCHDSKTALDKTGTHDKEPLERGAV
>NZ_CP012375.1|WP_046663541.1|4291107_4291659_-|hypothetical-protein
MNNYQPEDVQWIKSLLRHDEGDSNPATEDILFLDEDNEEAHRFDLISAYIDNEVTVEERKLVQHWLDHDAAAKKLYRQLLGLQTNLKQIPVPVAMAGDRLAEQVFRKVDGQRRRQYYVYGGAIFTAMAIAVSSYFISGRNDPLSQMASGPGSISQEGDHLMIALNHPIMEIPTTEQPKENGQR
>NZ_CP012375.1|WP_046663542.1|4291772_4292429_-|sigma-70-family-RNA-polymerase-sigma-factor
MSQSIPASWSLEAKKSQNPLSPDKLSNYDLIARCQEGCQPDRAAFAELLRRYQAHVDKLLYHLAPDWQDRADLAQEVWIRVYRNINRLHEPLKFRGWLSRIATNLFYDELRKRKRVNHPISLDAPRRVEDGEIDWDIESDYPSPDEHLTTHEFYDQLQAAIADLPEAFRTTIILREIEGMAYEEIAEITGVSLGTVKSRIARARAKLQSVLQPYFTEG

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Crispr_ID: NZ_CP012375_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012375_25

4284558-4284693

TypeV

Consensus_repeat	Method
TATGGTATTAGCTAAAGTGGTTTTCGGTGCAGCCCCGACCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012375_25

>merge|NZ_CP012375|25|4284558-4284693|CRISPRCasFinder
TATGGTATTAGCTAAAGTGGTTTTCGGTGCAGCCCCGACCACTAGATCAACTTTTTGACCCCTTTTGAGGATCATCAGGTTTCAGGTGTTTATCTATGGTATTAGCTAAAGTGGTTTTCGGTACAGCCCCGACCAC

>NZ_CP012375|25|24|4284558-4284693|CRISPRCasFinder
TATGGTATTAGCTAAAGTGGTTTTCGGTGCAGCCCCGACCAC	TAGATCAACTTTTTGACCCCTTTTGAGGATCATCAGGTTTCAGGTGTTTATC
TATGGTATTAGCTAAAGTGGTTTTCGGTACAGCCCCGACCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012375.1\|WP_046660511.1\|4285579_4286569_-\|transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP012375.1\|WP_046663533.1\|4280324_4281740_+\|precorrin-3B-synthase	unknown	unknown	gnl\|CDD\|236573
NZ_CP012375.1\|WP_046663535.1\|4282372_4283077_+\|precorrin-2-C(20)-methyltransferase	unknown	unknown	gnl\|CDD\|180341
NZ_CP012375.1\|WP_046663529.1\|4273174_4273756_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP012375.1\|WP_046663542.1\|4291772_4292429_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236608
NZ_CP012375.1\|WP_046663530.1\|4276781_4277216_+\|endonuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|238509
NZ_CP012375.1\|WP_080949794.1\|4277467_4278736_-\|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	unknown	unknown	gnl\|CDD\|225151
NZ_CP012375.1\|WP_046663534.1\|4281749_4282376_+\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|181352
NZ_CP012375.1\|WP_046663536.1\|4283388_4284537_+\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NZ_CP012375.1\|WP_052734211.1\|4287300_4289061_+\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP012375.1\|WP_066030221.1\|4272296_4272944_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046663531.1\|4278799_4279447_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046663541.1\|4291107_4291659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012375.1\|WP_046663532.1\|4279504_4280140_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP012375.1\|WP_080949794.1\|4277467_4278736_-\|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	gnl\|CDD\|225151	COG2242, CobL, Precorrin-6B methylase 2 [Coenzyme metabolism].	1.80645e-73
NZ_CP012375.1\|WP_046663534.1\|4281749_4282376_+\|precorrin-8X-methylmutase	gnl\|CDD\|181352	PRK08285, cobH, precorrin-8X methylmutase; Reviewed.	3.66558e-128
NZ_CP012375.1\|WP_046663536.1\|4283388_4284537_+\|DNA-protecting-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	2.48968e-117
NZ_CP012375.1\|WP_046663542.1\|4291772_4292429_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	1.33194e-83
NZ_CP012375.1\|WP_046660511.1\|4285579_4286569_-\|transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.7635e-33
NZ_CP012375.1\|WP_046663533.1\|4280324_4281740_+\|precorrin-3B-synthase	gnl\|CDD\|236573	PRK09567, nirA, NirA family protein.	7.01329e-108
NZ_CP012375.1\|WP_046663535.1\|4282372_4283077_+\|precorrin-2-C(20)-methyltransferase	gnl\|CDD\|180341	PRK05990, PRK05990, precorrin-2 C(20)-methyltransferase; Reviewed.	2.51971e-94
NZ_CP012375.1\|WP_046663529.1\|4273174_4273756_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.70848e-34
NZ_CP012375.1\|WP_046663530.1\|4276781_4277216_+\|endonuclease-domain-containing-protein	gnl\|CDD\|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	3.54072e-43
NZ_CP012375.1\|WP_052734211.1\|4287300_4289061_+\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.59644e-123

>NZ_CP012375.1|WP_046663536.1|4283388_4284537_+|DNA-protecting-protein-DprA
MTDDRVYWLAWSSIAGVGPISLKRLYQHFGSVAVAWNASDSAIAEGAGFGKKLMVAVREGRSQIDPEALFAEHIQKNPLFWTPSDPEYPRFLREIPSPPPLLYYQGKVNLEENQGNIPTVAIVGTRNPTDHGRRWARRLSTLLAQQGFTIVSGMAEGIDGEAHQSCLKAGGRTIAVLGTGVDVVYPSRHRQLHADIQKQGLVISEHPAATQPNKAHFPSRNRIIAGLSRATIVIEAPERSGSLITASYANEFGGDIYALPNSPDIAAARGCLQLIHQGAEIIVSEEKLLEMLGAIPTTNQSAPLNLSPSLPLETSPAVNAAPPVNLEPRLAQVYQLFDRDALLFDIIVQKMQIPTSEVAGILLELELIGLVTQLPGMRYQKT
>NZ_CP012375.1|WP_046663535.1|4282372_4283077_+|precorrin-2-C(20)-methyltransferase
MNKLGKLYGLGIGPGDPELLTLKAHRILTTVPVIAYPTLESGKVLARAIVSDFIRPEQIEIPMPLPFSVERSSQPHYDIAAENIAEHLNLGRDVAVLCVGDPMLYGTFMYIFNRLCDRFSIEVVPGISSVMASAAMLGVPITYRNDVFSIMPATLKAEILRDRLAFIDAAAIIKLGRHFAKVRDILEELGLLERALYIERATLPNQQIIPITEVDPEAATYWSLILIPSKTKPQ
>NZ_CP012375.1|WP_046663534.1|4281749_4282376_+|precorrin-8X-methylmutase
MEYIKNGEEIYRKSFAIIRAETNWENLPDDLAHVAVRLIHSCGMTDITEDLEASPDAVKIGRNALAGGAAILCDSQMVANGITKARLPKNNPIICTLNHPEVTELARQINNTRSAAALELWRRHLAGAVVAIGNAPTALFRLLELLDQNVDKPALILGFPVGFVGAAESKIELATNSRGVPFITLHGRRGGSAIAAAAVNALAKENEL
>NZ_CP012375.1|WP_046663533.1|4280324_4281740_+|precorrin-3B-synthase
MNWLVEANACPGLFYGTAAQDGFLIRLRTPGGWLNSPQGKAIATWLEQWQTTIQVTNRANLQIRGLQKSPSLEEFQTLQKLGLAAHNPSIDHLRNIMSSPTAGIDCQESIDTRPLVQELDNFIQNYPSIAQLSPKFSIGIDGGGAVGIGTGSTMAWQHRYNEIQLSAIVLNNPKNLTSILCFRLALGGDKQLYDTDLLIEPENCLAVVKALVTVYIDYVQQNPNIKGKKPRMKHLLKDWGLTKYLEQVNYQLHRTSTGIIQGQEYQQAAHSTQPYFHLGIHPQKQPGLSYIGLSLRLGQLTANQLWGLAALSETFGSGQLRLTPWQTVILPDIPDEKVSELLPKLASLGLSASPGWDAGIVACSGKPGCAAAATATQIHASLLADYLKEHLTCNSPVNIHLTGCAKSCAQPGPAEITLLGTTIEENGQILEAYQVYMGDSQKFLETPIFEGEFTKIPPLIAQILSSQKSKI
>NZ_CP012375.1|WP_046663532.1|4279504_4280140_+|hypothetical-protein
MTTTADDVWKLLAELVEAQKETERCFQETERRFQETERILKEQSLETERILKEQSLKTDRQITRLSKEIGNLGGKWGRFVENMVAPACETLFLNRQIPVHQVSQRVRKRLDGKTLEIDVLVTNENHVLVVEVKSSLSVDDVKELIKNLTEFRQFFPEYNQKQLYGAVAGIEIEEGADKYAYRQGLFVLAQRGENVAILNDTEFQPKTWYDP
>NZ_CP012375.1|WP_046663531.1|4278799_4279447_+|hypothetical-protein
MTTTADDVWKLLAELVEAQKETERCFQETERRFQETERVLKEQSLKTERRFQETERILKEQSLKTDRQITRVSQEIGNLGGKWGRFVENMVAPACETLFLNRDIPVHQVSQRVRKRLDGKTLEIDVLVTNENHVLVVEVKSSLSVDDVKELIKNLTEFRQFFPEYNQKQLYGAVAGIEIEEGADKYAYRQGLFVLAQRGENVAILNDTEFQPKTW
>NZ_CP012375.1|WP_080949794.1|4277467_4278736_-|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE
MADNEIVAIFFNMADRNCKSKWLSIIGIGEDGLEGLSSVGRSLLSLASVIVGGERHLAMLPPEDQRQKLLWTSPIQDSVNEIIRRRGQSVCVLASGDPMCYGIGVTLTRQIPLEEMTIIPSPSAFSLACSRLGWSLSEVETLSLCGRPPACLNGVLYPGAKLLVLSADAQTPALAARLLREGGFGESSITVLEHLGGTRERHIQGIANDWQFTDLADLNVIAISCISSHPPTLAPRLPGLPDSAYHHDGQLTKREVRAITLSRLAPLPGQLLWDVGAGCGSIAIEWLRSDRRCQGIAIEHHPTRLQYIADNAAALGTLHLQIVAGIAPSALEDLPQPDAIFIGGGITTPHLLETCWLALRPGGRLVANTVTIESELVLLQWHSKLGGELLRIGIEKAEPVGKFLGWKAMAPVTQWTVLKPRL
>NZ_CP012375.1|WP_046663530.1|4276781_4277216_+|endonuclease-domain-containing-protein
MQLTNHHHLPYNPKLVERAKELRKNMTKAERKLWYEYLKNFQYRVHRQRPIDQFIVDFYCPELKLVIEIDGDIHNREDAQNYDLERTQILSGYGLTVIRFTNQEVLSNFEGVCGVIGSLIPPTPLDKGGFDPSLLRGFDPPNPP
>NZ_CP012375.1|WP_046663529.1|4273174_4273756_+|Uma2-family-endonuclease
MSLSLITRKFTVEEYEKMTTEGIIKPDEKVELIRGEIIKMSPMGTRHAACIARLTQLFYRKFGDLILLGVQNPIRLNNNSQPEPDLSLLIPRSDFYVAAYPCPQDIYLIIEVSDSTLDYDRYTKIPLYAEANIQEVWIVNLKEECLEVYRHPLHGSYQAIQKYYRGEIIFIESFPAIELTLIEILGNKSEIKG
>NZ_CP012375.1|WP_066030221.1|4272296_4272944_-|hypothetical-protein
MLKKIAVPMGNIKSRNFMVKRKQPYSLIYLLTLVIGLVIAIAPDGQAQTPDSNTPASDPNELKPLNQADSVLSLQGGQRLVEEANAAINAAKYSVAVDKLNQARRIFNQLSNYHLQLANSFSGIDPKVFDSQRQSALNTGQMRDEATYKLALVHRAQNQPELAVPLLIQVIQSQNPTSELGQKSYQQLYEMGFVSTPISAPTPTSATPNNSPPRQ
>NZ_CP012375.1|WP_046660511.1|4285579_4286569_-|transposase
MKNYTWEYIQKYPKQTKRLLGIDYQQLEQLMALGKLIHRKNQSEIEKTKIRINQPGSGTPPKLSEEEQIVLMLVYLRHHLSFQILGLIFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRDYELIVDSAEQPVERPTDYQEQKIYYSGKQKRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRQTLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEGEQSGEVIDVIISHSFPSKLDFVSSNPD
>NZ_CP012375.1|WP_052734211.1|4287300_4289061_+|group-II-intron-reverse-transcriptase/maturase
MVLSSNEKVMNTATKPMYEWKDINWRKAERCVFKLSKRIFKASQRGDVKLVHKLQRLLLKSWYAKLIAVRRVSQDNQGKKTAGVDGIKSLTPKQRMALVNNLKPGNKSKPTRRVWIPKPNTDEKRPLGIPTMYERALQALVKLALEPEWEAKFEPNSYGFRPARSAHDAIGAIYISINKKPKYVLDADISKCFDKINHQKLLTKLQTYPKLRQQIKAWLKSGVMDGKNLFPTNEGTPQGGVISPLLANIALHGMEERVKQYAKTLKGNKSKNEQALTLIRYADDFVILHEDLKVIKECQEIIKQWLAEMGLELKPSKTRISHTLETYDDYVGFDFLGFNIRQYQVGKHHGAKSSKGVKLGFKTLIKPSAEKVKSHLKKLGEVVNSQKSSPQDALIKRLNPIIRGWSNYYSSVVSSKTFTDCDYYFFEKLKRWAYRRHPMKNKTWIMRKYWHTEGKDNWVFSTRGGKNPFKLARHLDTKIVRYVKVKGDKSPYDGDLIYWSSRMGKHPEMPPEKAILLKRQQGRCAYCGLYFQDGDILETDHIIPKSKGGKNNRDNKQLLHRHCHDSKTALDKTGTHDKEPLERGAV
>NZ_CP012375.1|WP_046663541.1|4291107_4291659_-|hypothetical-protein
MNNYQPEDVQWIKSLLRHDEGDSNPATEDILFLDEDNEEAHRFDLISAYIDNEVTVEERKLVQHWLDHDAAAKKLYRQLLGLQTNLKQIPVPVAMAGDRLAEQVFRKVDGQRRRQYYVYGGAIFTAMAIAVSSYFISGRNDPLSQMASGPGSISQEGDHLMIALNHPIMEIPTTEQPKENGQR
>NZ_CP012375.1|WP_046663542.1|4291772_4292429_-|sigma-70-family-RNA-polymerase-sigma-factor
MSQSIPASWSLEAKKSQNPLSPDKLSNYDLIARCQEGCQPDRAAFAELLRRYQAHVDKLLYHLAPDWQDRADLAQEVWIRVYRNINRLHEPLKFRGWLSRIATNLFYDELRKRKRVNHPISLDAPRRVEDGEIDWDIESDYPSPDEHLTTHEFYDQLQAAIADLPEAFRTTIILREIEGMAYEEIAEITGVSLGTVKSRIARARAKLQSVLQPYFTEG

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP012375_12	12.1\|2268362\|47\|NZ_CP012375\|CRISPRCasFinder	2268362-2268408	47	NZ_CP012375.1	310966-311012	1	0.979

1. spacer 12.1|2268362|47|NZ_CP012375|CRISPRCasFinder matches to position: 310966-311012, mismatch: 1, identity: 0.979

taaacagtaaacagtaatcagtgagacactgttgatgggagtttttt	CRISPR spacer
taaacagtaaacagtaatcagtgagacactgttgatggaagtttttt	Protospacer
**************************************.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP012375_18	18.1\|3543054\|48\|NZ_CP012375\|CRISPRCasFinder	3543054-3543101	48	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	60561-60608	1	0.979
NZ_CP012375_20	20.3\|3602399\|36\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602399-3602434	36	NC_001597	Microcystis aeruginosa plasmid pMA2 DNA, complete sequence	612-647	1	0.972
NZ_CP012375_20	20.27\|3604119\|35\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604119-3604153	35	NZ_CP026286	Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence	5231-5265	1	0.971
NZ_CP012375_20	20.47\|3605559\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605559-3605592	34	NC_001597	Microcystis aeruginosa plasmid pMA2 DNA, complete sequence	614-647	1	0.971
NZ_CP012375_22	22.10\|3612270\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3612270-3612303	34	LC425515	Uncultured phage DNA, contig: NODE375	16260-16293	1	0.971
NZ_CP012375_22	22.23\|3613209\|35\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3613209-3613243	35	LC425515	Uncultured phage DNA, contig: NODE375	17435-17469	1	0.971
NZ_CP012375_11	11.2\|2091687\|22\|NZ_CP012375\|CRISPRCasFinder	2091687-2091708	22	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	575151-575172	2	0.909
NZ_CP012375_22	22.8\|3612128\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3612128-3612161	34	LC425515	Uncultured phage DNA, contig: NODE375	16292-16325	2	0.941
NZ_CP012375_20	20.4\|3602472\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602472-3602505	34	NC_001597	Microcystis aeruginosa plasmid pMA2 DNA, complete sequence	3851-3884	3	0.912
NZ_CP012375_20	20.5\|3602543\|35\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602543-3602577	35	LC425518	Uncultured phage DNA, contig: NODE577	10228-10262	3	0.914
NZ_CP012375_20	20.32\|3604480\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604480-3604513	34	NZ_CP026286	Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence	4896-4929	3	0.912
NZ_CP012375_20	20.60\|3606488\|33\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606488-3606520	33	NZ_CP026286	Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence	1301-1333	3	0.909
NZ_CP012375_1	1.1\|455466\|28\|NZ_CP012375\|CRISPRCasFinder	455466-455493	28	MG592600	Vibrio phage 1.236.O._10N.261.52.C4, partial genome	19899-19926	6	0.786
NZ_CP012375_15	15.1\|2929015\|37\|NZ_CP012375\|CRISPRCasFinder	2929015-2929051	37	NZ_CP043057	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence	11932-11968	6	0.838
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	KM359505	Prochlorococcus phage P-TIM68, complete genome	142848-142881	6	0.824
NZ_CP012375_20	20.58\|3606345\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NZ_AP019802	Thermus thermophilus strain HC11 plasmid pHC11, complete sequence	66570-66603	6	0.824
NZ_CP012375_20	20.58\|3606345\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NZ_LR027520	Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence	338425-338458	6	0.824
NZ_CP012375_20	20.58\|3606345\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NC_005838	Thermus thermophilus HB27 plasmid pTT27, complete sequence	168234-168267	6	0.824
NZ_CP012375_24	24.1\|4278943\|26\|NZ_CP012375\|CRISPRCasFinder	4278943-4278968	26	NZ_CP049700	Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2a, complete sequence	172136-172161	6	0.769
NZ_CP012375_20	20.10\|3602901\|33\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602901-3602933	33	NC_002679	Mesorhizobium japonicum MAFF 303099 plasmid pMLa, complete sequence	151254-151286	7	0.788
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	HQ633071	Synechococcus phage S-SKS1 genomic sequence	23104-23137	7	0.794
NZ_CP012375_22	22.9\|3612199\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3612199-3612232	34	LC425515	Uncultured phage DNA, contig: NODE375	18824-18857	7	0.794
NZ_CP012375_11	11.1\|2091633\|31\|NZ_CP012375\|CRISPRCasFinder	2091633-2091663	31	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	729906-729936	8	0.742
NZ_CP012375_11	11.1\|2091633\|31\|NZ_CP012375\|CRISPRCasFinder	2091633-2091663	31	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	730376-730406	8	0.742
NZ_CP012375_20	20.20\|3603621\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3603621-3603654	34	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	159295-159328	8	0.765
NZ_CP012375_20	20.35\|3604694\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	MK016664	Synechococcus phage S-B68, complete genome	7447-7480	8	0.765
NZ_CP012375_20	20.41\|3605125\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605125-3605158	34	NC_004959	Lactococcus lactis W-37 plasmid pSRQ900, complete sequence	4719-4752	8	0.765
NZ_CP012375_20	20.41\|3605125\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605125-3605158	34	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	398391-398424	8	0.765
NZ_CP012375_20	20.41\|3605125\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605125-3605158	34	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	194212-194245	8	0.765
NZ_CP012375_20	20.51\|3605843\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	CP003352	Enterococcus faecium Aus0004 plasmid AUS0004_p1, complete sequence	49423-49456	8	0.765
NZ_CP012375_20	20.51\|3605843\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	97964-97997	8	0.765
NZ_CP012375_20	20.51\|3605843\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NC_021995	Enterococcus faecium Aus0085 plasmid p2, complete sequence	58959-58992	8	0.765
NZ_CP012375_20	20.51\|3605843\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_LR135193	Enterococcus faecium isolate E4438 plasmid 3	58722-58755	8	0.765
NZ_CP012375_20	20.51\|3605843\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_LT598666	Enterococcus faecium isolate Ef_aus00233 plasmid 4	64296-64329	8	0.765
NZ_CP012375_20	20.51\|3605843\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	205040-205073	8	0.765
NZ_CP012375_20	20.51\|3605843\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605843-3605876	34	NZ_CP040851	Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence	17719-17752	8	0.765
NZ_CP012375_20	20.58\|3606345\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	463088-463121	8	0.765
NZ_CP012375_20	20.58\|3606345\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	226357-226390	8	0.765
NZ_CP012375_20	20.60\|3606488\|33\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606488-3606520	33	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	163922-163954	8	0.758
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP007616	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence	70039-70072	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	276184-276217	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	579232-579265	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	167659-167692	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP004877	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence	295955-295988	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP004877	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence	297112-297145	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NC_020394	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-233, complete sequence	93242-93275	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	242169-242202	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	366658-366691	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	375882-375915	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	415758-415791	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP004860	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence	308382-308415	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP053952	Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence	210421-210454	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	270698-270731	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	330704-330737	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP010090	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence	299056-299089	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	546188-546221	9	0.735
NZ_CP012375_20	20.9\|3602830\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3602830-3602863	34	NZ_CP053949	Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence	340571-340604	9	0.735
NZ_CP012375_20	20.35\|3604694\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	JX173487	Pseudomonas phage Phi-S1, complete genome	19330-19363	9	0.735
NZ_CP012375_20	20.35\|3604694\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	MT094431	Pseudomonas phage BIM BV-46, complete genome	18730-18763	9	0.735
NZ_CP012375_20	20.35\|3604694\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	KP025626	Pseudomonas phage Pf-10, complete genome	19066-19099	9	0.735
NZ_CP012375_20	20.35\|3604694\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604694-3604727	34	NC_015264	Pseudomonas phage phiIBB-PF7A, complete genome	18428-18461	9	0.735
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	NZ_CP007648	Lactobacillus salivarius strain JCM1046 plasmid pMP1046B, complete sequence	57503-57536	9	0.735
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	NC_011258	Borrelia recurrentis A1 plasmid pl37, complete sequence	13925-13958	9	0.735
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	NC_011260	Borrelia recurrentis A1 plasmid pl53, complete sequence	29542-29575	9	0.735
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	NC_018686	Bacillus thuringiensis MC28 plasmid pMC183, complete sequence	177173-177206	9	0.735
NZ_CP012375_20	20.53\|3605985\|37\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605985-3606021	37	MN694138	Marine virus AFVG_250M1080, complete genome	31429-31465	9	0.757
NZ_CP012375_20	20.53\|3605985\|37\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605985-3606021	37	MN693684	Marine virus AFVG_250M122, complete genome	11469-11505	9	0.757
NZ_CP012375_20	20.57\|3606273\|35\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606273-3606307	35	NZ_LN554848	Aliivibrio wodanis genome assembly AWOD1, plasmid : pAWOD920	24799-24833	9	0.743
NZ_CP012375_20	20.58\|3606345\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	KX815338	Streptomyces phage Joe, complete genome	33035-33068	9	0.735
NZ_CP012375_22	22.15\|3612632\|35\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3612632-3612666	35	NC_014842	Pantoea sp. At-9b plasmid pPAT9B05, complete sequence	90645-90679	9	0.743
NZ_CP012375_19	19.1\|3600629\|34\|NZ_CP012375\|CRISPRCasFinder	3600629-3600662	34	MN693599	Marine virus AFVG_25M122, complete genome	5114-5147	10	0.706
NZ_CP012375_19	19.1\|3600629\|34\|NZ_CP012375\|CRISPRCasFinder	3600629-3600662	34	MN693251	Marine virus AFVG_25M125, complete genome	29270-29303	10	0.706
NZ_CP012375_19	19.1\|3600629\|34\|NZ_CP012375\|CRISPRCasFinder	3600629-3600662	34	MN693438	Marine virus AFVG_25M124, complete genome	4483-4516	10	0.706
NZ_CP012375_20	20.34\|3604623\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	KX190834	Bacillus phage BMBtpLA3, complete genome	20505-20538	10	0.706
NZ_CP012375_20	20.34\|3604623\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	NC_011645	Bacillus phage TP21-L, complete genome	3442-3475	10	0.706
NZ_CP012375_20	20.34\|3604623\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	KF296717	Bacillus phage proCM3, complete genome	21675-21708	10	0.706
NZ_CP012375_20	20.34\|3604623\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	JX887877	Bacillus phage vB_BtS_BMBtp2, complete genome	27129-27162	10	0.706
NZ_CP012375_20	20.34\|3604623\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3604623-3604656	34	MT136606	Bacillus phage vB_BceS_KLEB30-3S, complete genome	3293-3326	10	0.706
NZ_CP012375_20	20.41\|3605125\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605125-3605158	34	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	94658-94691	10	0.706
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	MN693898	Marine virus AFVG_250M937, complete genome	4297-4330	10	0.706
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	MN694171	Marine virus AFVG_250M572, complete genome	2861-2894	10	0.706
NZ_CP012375_20	20.50\|3605772\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3605772-3605805	34	MN693979	Marine virus AFVG_250M571, complete genome	50870-50903	10	0.706
NZ_CP012375_20	20.58\|3606345\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606345-3606378	34	MH271308	Microbacterium phage Percival, complete genome	38089-38122	11	0.676
NZ_CP012375_20	20.64\|3606772\|36\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606772-3606807	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	7229-7264	11	0.694
NZ_CP012375_22	22.2\|3611698\|34\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3611698-3611731	34	NZ_CP039925	Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129b, complete sequence	91042-91075	11	0.676
NZ_CP012375_20	20.56\|3606201\|35\|NZ_CP012375\|PILER-CR,CRISPRCasFinder,CRT	3606201-3606235	35	LC547238	Entercoccus phage phiM1EF2 DNA, nearly complete genome	55814-55848	12	0.657

1. spacer 18.1|3543054|48|NZ_CP012375|CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 1, identity: 0.979

cagaatcgagaaacacatcgagaaaacaagcgagagtgttgccctgag	CRISPR spacer
cagaatcgagaaacacagcgagaaaacaagcgagagtgttgccctgag	Protospacer
***************** ******************************

2. spacer 20.3|3602399|36|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_001597 (Microcystis aeruginosa plasmid pMA2 DNA, complete sequence) position: , mismatch: 1, identity: 0.972

acggttcaaccgacctaaaacaactattagcagggg	CRISPR spacer
acggttcaaccgacctgaaacaactattagcagggg	Protospacer
****************.*******************

3. spacer 20.27|3604119|35|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026286 (Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence) position: , mismatch: 1, identity: 0.971

atctaactgtgacactttgagaattggcactcgat	CRISPR spacer
atctaactgtgacactttgagaattggcacttgat	Protospacer
*******************************.***

4. spacer 20.47|3605559|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_001597 (Microcystis aeruginosa plasmid pMA2 DNA, complete sequence) position: , mismatch: 1, identity: 0.971

ggttcaaccgacctaaaacaactattagcagggg	CRISPR spacer
ggttcaaccgacctgaaacaactattagcagggg	Protospacer
**************.*******************

5. spacer 22.10|3612270|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 1, identity: 0.971

aagctttctttcagtacccggctcacaagcctga	CRISPR spacer
aagctttcttccagtacccggctcacaagcctga	Protospacer
**********.***********************

6. spacer 22.23|3613209|35|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 1, identity: 0.971

agtcttctggcaattaggccgcgccctaaaattgt	CRISPR spacer
agtcttctggcaactaggccgcgccctaaaattgt	Protospacer
*************.*********************

7. spacer 11.2|2091687|22|NZ_CP012375|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 2, identity: 0.909

gctcagtattggcagtgttggc	CRISPR spacer
acttagtattggcagtgttggc	Protospacer
.**.******************

8. spacer 22.8|3612128|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 2, identity: 0.941

gaaaccgaagattaattttatcagactcaaacct	CRISPR spacer
gaaaccgaagattaatcttatcagactcaaatct	Protospacer
****************.**************.**

9. spacer 20.4|3602472|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_001597 (Microcystis aeruginosa plasmid pMA2 DNA, complete sequence) position: , mismatch: 3, identity: 0.912

gtttttcggctatttttagcccaattctgtagga	CRISPR spacer
attttttggctatttttagcccaattctgtacga	Protospacer
.*****.************************ **

10. spacer 20.5|3602543|35|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425518 (Uncultured phage DNA, contig: NODE577) position: , mismatch: 3, identity: 0.914

aagtggaattaatgcttaaaaatactgctgaattg	CRISPR spacer
aagtggagttaatgctcaaaaatactgctgaatta	Protospacer
*******.********.*****************.

11. spacer 20.32|3604480|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026286 (Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.912

aagaattttttcgagattgggagaaataggaagt	CRISPR spacer
gagaattttttcgagattgggagaaataggtagc	Protospacer
.***************************** **.

12. spacer 20.60|3606488|33|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026286 (Microcystis aeruginosa NIES-2549 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.909

atggcgcggccgatgatgctttttccttcccct	CRISPR spacer
atggcacggccgataatgctttttccttccccc	Protospacer
*****.********.*****************.

13. spacer 1.1|455466|28|NZ_CP012375|CRISPRCasFinder matches to MG592600 (Vibrio phage 1.236.O._10N.261.52.C4, partial genome) position: , mismatch: 6, identity: 0.786

gattcatgaatcaaccctacaaagtatt	CRISPR spacer
agtacatgaaccaaccctaccaagtatc	Protospacer
..* ******.********* ******.

14. spacer 15.1|2929015|37|NZ_CP012375|CRISPRCasFinder matches to NZ_CP043057 (Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence) position: , mismatch: 6, identity: 0.838

cgggcgttgggtttccttgcgtcaacccaacctacct	CRISPR spacer
atcatgttgggtttccttgcgtcaacccaacctactt	Protospacer
   ..******************************.*

15. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 6, identity: 0.824

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
ggtgtaggatttgacagaaataagagaagatttg	Protospacer
*. . **.****** *******************

16. spacer 20.58|3606345|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 6, identity: 0.824

ccccccttccccctccggcccgacc--ggcgatcga	CRISPR spacer
ccccccttccccctcctggccgacccggacgacc--	Protospacer
**************** * ******  *.***.*

17. spacer 20.58|3606345|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 6, identity: 0.824

ccccccttccccctccggcccgacc--ggcgatcga	CRISPR spacer
ccccccttccccctcctggccgacccggacgacc--	Protospacer
**************** * ******  *.***.*

18. spacer 20.58|3606345|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_005838 (Thermus thermophilus HB27 plasmid pTT27, complete sequence) position: , mismatch: 6, identity: 0.824

ccccccttccccctccggcccgacc--ggcgatcga	CRISPR spacer
ccccccttccccctcctggccgacccggacgacc--	Protospacer
**************** * ******  *.***.*

19. spacer 24.1|4278943|26|NZ_CP012375|CRISPRCasFinder matches to NZ_CP049700 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2a, complete sequence) position: , mismatch: 6, identity: 0.769

gcgacgctttcaagaaaccgagcgca	CRISPR spacer
cgagcgctttccagaaaccgagcgcg	Protospacer
  ..******* *************.

20. spacer 20.10|3602901|33|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_002679 (Mesorhizobium japonicum MAFF 303099 plasmid pMLa, complete sequence) position: , mismatch: 7, identity: 0.788

ctgtatcgtgccgtcgatttcatccccatagat	CRISPR spacer
atgtaccgggccgtcgatttcatccgaagatat	Protospacer
 ****.** ****************  * * **

21. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to HQ633071 (Synechococcus phage S-SKS1 genomic sequence) position: , mismatch: 7, identity: 0.794

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
gaaagatctgttgagacaaataagaaaagatttg	Protospacer
****.*    ****** ********.********

22. spacer 22.9|3612199|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 7, identity: 0.794

tgccgaaaggcaaattcgcaacttttgcggattt	CRISPR spacer
ctttaaaagggaaattcgcaaattttgcggattt	Protospacer
. ...***** ********** ************

23. spacer 11.1|2091633|31|NZ_CP012375|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 8, identity: 0.742

tttaagtctcgctagtgccagcagcatttta	CRISPR spacer
aataagtctcgctagtgtcagcggcgatcca	Protospacer
  ***************.****.**. *..*

24. spacer 11.1|2091633|31|NZ_CP012375|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 8, identity: 0.742

tttaagtctcgctagtgccagcagcatttta	CRISPR spacer
aataagtctcgctagtgtcagcggcgatcca	Protospacer
  ***************.****.**. *..*

25. spacer 20.20|3603621|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 8, identity: 0.765

gtttgatactgcaattataccta-tttgtgattat	CRISPR spacer
tgttgatactgcaaagatacctattttatgttca-	Protospacer
  ************  ******* ***.** *.*

26. spacer 20.35|3604694|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MK016664 (Synechococcus phage S-B68, complete genome) position: , mismatch: 8, identity: 0.765

atcaatcaag---aaactcaagaaagcaatcaagaaa	CRISPR spacer
---tcttgagcgcaaactcaagaaagcaaacaagaaa	Protospacer
     *..**   **************** *******

27. spacer 20.41|3605125|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_004959 (Lactococcus lactis W-37 plasmid pSRQ900, complete sequence) position: , mismatch: 8, identity: 0.765

agtacaaataaaagattatgtaacttttattagt	CRISPR spacer
aatacaaataaaaaattatggaactttcgaaaat	Protospacer
*.***********.****** ******..  *.*

28. spacer 20.41|3605125|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

agtacaaataaaagattatgtaacttttattagt	CRISPR spacer
aaaatcgagaaaagattatgaaacatttattagt	Protospacer
*. *. .* *********** *** *********

29. spacer 20.41|3605125|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.765

agtacaaataaaagattatgtaacttttattagt	CRISPR spacer
attatgatgaaaaaattatggaacttttattaga	Protospacer
* **..*  ****.****** ************

30. spacer 20.51|3605843|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to CP003352 (Enterococcus faecium Aus0004 plasmid AUS0004_p1, complete sequence) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

31. spacer 20.51|3605843|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

32. spacer 20.51|3605843|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_021995 (Enterococcus faecium Aus0085 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

33. spacer 20.51|3605843|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135193 (Enterococcus faecium isolate E4438 plasmid 3) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

34. spacer 20.51|3605843|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT598666 (Enterococcus faecium isolate Ef_aus00233 plasmid 4) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

35. spacer 20.51|3605843|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

36. spacer 20.51|3605843|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040851 (Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence) position: , mismatch: 8, identity: 0.765

ctatcagaaaaactgttttatctgttgccactaa	CRISPR spacer
ctatcagaaatactgttttatttgcttcacttat	Protospacer
********** **********.**.* *  .**

37. spacer 20.58|3606345|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 8, identity: 0.765

ccccccttccccctccggcccgaccggcgatcga	CRISPR spacer
gcggccggcctcctccggcccgagcggcgatcgg	Protospacer
 *  **  **.************ *********.

38. spacer 20.58|3606345|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 8, identity: 0.765

ccccccttccccctccggcccgaccggcgatcga	CRISPR spacer
ccgctcgcccccttccggccggaccggcgatccc	Protospacer
** *.* .****.******* ***********

39. spacer 20.60|3606488|33|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

atggcgcggccgatgatgctttttccttcccct	CRISPR spacer
agggcgcggccgatggtgctctttccgctgccg	Protospacer
* *************.****.***** .. **

40. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007616 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

41. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

42. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

43. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

44. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

45. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

46. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_020394 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-233, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

47. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

48. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

49. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

50. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

51. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004860 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

52. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053952 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

53. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

54. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

55. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010090 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

56. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

57. spacer 20.9|3602830|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053949 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

accccgcag-----cactcggatcgatttacgattacct	CRISPR spacer
-----gcaaatttccactccgatggatttacgattacca	Protospacer
     ***.     ***** *** **************

58. spacer 20.35|3604694|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to JX173487 (Pseudomonas phage Phi-S1, complete genome) position: , mismatch: 9, identity: 0.735

atcaatcaagaaactcaagaaagcaatcaagaaa	CRISPR spacer
ctttggtaagaaactcaagaaggcattcaagaag	Protospacer
 *. . .**************.*** *******.

59. spacer 20.35|3604694|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MT094431 (Pseudomonas phage BIM BV-46, complete genome) position: , mismatch: 9, identity: 0.735

atcaatcaagaaactcaagaaagcaatcaagaaa	CRISPR spacer
ctttggtaagaaactcaagaaggcattcaagaag	Protospacer
 *. . .**************.*** *******.

60. spacer 20.35|3604694|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KP025626 (Pseudomonas phage Pf-10, complete genome) position: , mismatch: 9, identity: 0.735

atcaatcaagaaactcaagaaagcaatcaagaaa	CRISPR spacer
ctttggtaagaaactcaagaaggcattcaagaag	Protospacer
 *. . .**************.*** *******.

61. spacer 20.35|3604694|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_015264 (Pseudomonas phage phiIBB-PF7A, complete genome) position: , mismatch: 9, identity: 0.735

atcaatcaagaaactcaagaaagcaatcaagaaa	CRISPR spacer
ctttggtaagaaactcaagaaggcattcaagaag	Protospacer
 *. . .**************.*** *******.

62. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007648 (Lactobacillus salivarius strain JCM1046 plasmid pMP1046B, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
actaaagaaaatgagagaaataagagaagaccaa	Protospacer
.  ******  *******************.. .

63. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_011258 (Borrelia recurrentis A1 plasmid pl37, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
tgaaggaagttagagagaaattagagaagatttt	Protospacer
 .**...*.** ********* ***********

64. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_011260 (Borrelia recurrentis A1 plasmid pl53, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
tgaaggaagttagagagaaattagagaagatttt	Protospacer
 .**...*.** ********* ***********

65. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_018686 (Bacillus thuringiensis MC28 plasmid pMC183, complete sequence) position: , mismatch: 9, identity: 0.735

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
aaaaaagaatttgagaataataagaagactttaa	Protospacer
.***************. *******..*  ** .

66. spacer 20.53|3605985|37|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN694138 (Marine virus AFVG_250M1080, complete genome) position: , mismatch: 9, identity: 0.757

attaatactatcttctctatttctttttgaattttgt	CRISPR spacer
ttgaatactatcttctgtaattctttttgattctcag	Protospacer
 * ************* ** ********** *.*..

67. spacer 20.53|3605985|37|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN693684 (Marine virus AFVG_250M122, complete genome) position: , mismatch: 9, identity: 0.757

attaatactatcttctctatttctttttgaattttgt	CRISPR spacer
ttgaatactatcttctgtaattctttttgattctcag	Protospacer
 * ************* ** ********** *.*..

68. spacer 20.57|3606273|35|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN554848 (Aliivibrio wodanis genome assembly AWOD1, plasmid : pAWOD920) position: , mismatch: 9, identity: 0.743

cctcgctggtttcctttagttttttgatgttttcc	CRISPR spacer
tcatgatggtttcctttagtttattggtgtttggg	Protospacer
.* .* **************** ***.*****

69. spacer 20.58|3606345|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KX815338 (Streptomyces phage Joe, complete genome) position: , mismatch: 9, identity: 0.735

ccccccttccccctccggcccgaccggcgatcga	CRISPR spacer
cagcactacccccttcggcccgaccggcgagacg	Protospacer
*  * ** ******.***************   .

70. spacer 22.15|3612632|35|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_014842 (Pantoea sp. At-9b plasmid pPAT9B05, complete sequence) position: , mismatch: 9, identity: 0.743

gacttaaggccgtcatggcagaccgggatgtaaat	CRISPR spacer
acccgaaggccgtcacggcagaccggcatgtggac	Protospacer
. *. **********.********** ****..*.

71. spacer 19.1|3600629|34|NZ_CP012375|CRISPRCasFinder matches to MN693599 (Marine virus AFVG_25M122, complete genome) position: , mismatch: 10, identity: 0.706

tgaatattggattgttgaggggtaattatggctg	CRISPR spacer
gaaactttggattgatgaggggttattatgtggc	Protospacer
 .**. ******** ******** ******

72. spacer 19.1|3600629|34|NZ_CP012375|CRISPRCasFinder matches to MN693251 (Marine virus AFVG_25M125, complete genome) position: , mismatch: 10, identity: 0.706

tgaatattggattgttgaggggtaattatggctg	CRISPR spacer
gaaactttggattgatgaggggttattatgtggc	Protospacer
 .**. ******** ******** ******

73. spacer 19.1|3600629|34|NZ_CP012375|CRISPRCasFinder matches to MN693438 (Marine virus AFVG_25M124, complete genome) position: , mismatch: 10, identity: 0.706

tgaatattggattgttgaggggtaattatggctg	CRISPR spacer
gaaactttggattgatgaggggttattatgtggc	Protospacer
 .**. ******** ******** ******

74. spacer 20.34|3604623|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KX190834 (Bacillus phage BMBtpLA3, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtta	Protospacer
.*************.** *******.* ...  *

75. spacer 20.34|3604623|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_011645 (Bacillus phage TP21-L, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtta	Protospacer
.*************.** *******.* ...  *

76. spacer 20.34|3604623|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to KF296717 (Bacillus phage proCM3, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtca	Protospacer
.*************.** *******.* ...  *

77. spacer 20.34|3604623|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to JX887877 (Bacillus phage vB_BtS_BMBtp2, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtca	Protospacer
.*************.** *******.* ...  *

78. spacer 20.34|3604623|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MT136606 (Bacillus phage vB_BceS_KLEB30-3S, complete genome) position: , mismatch: 10, identity: 0.706

tcaggatcaaaagaattgggattaagatgtaaaa	CRISPR spacer
ccaggatcaaaagagtttggattaaaagacgtta	Protospacer
.*************.** *******.* ...  *

79. spacer 20.41|3605125|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 10, identity: 0.706

agtacaaataaaagattatgtaacttttattagt	CRISPR spacer
gtcttatataaaaggttatttaacttttattttt	Protospacer
. . .* *******.**** ***********  *

80. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN693898 (Marine virus AFVG_250M937, complete genome) position: , mismatch: 10, identity: 0.706

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
aaaaaagaattagagagaaagaagaagttctata	Protospacer
.********** ******** ****..   * *.

81. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN694171 (Marine virus AFVG_250M572, complete genome) position: , mismatch: 10, identity: 0.706

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
aaaaaagaattagagagaaagaagaagttctata	Protospacer
.********** ******** ****..   * *.

82. spacer 20.50|3605772|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MN693979 (Marine virus AFVG_250M571, complete genome) position: , mismatch: 10, identity: 0.706

gaaaaagaatttgagagaaataagagaagatttg	CRISPR spacer
aaaaaagaattagagagaaagaagaagttctata	Protospacer
.********** ******** ****..   * *.

83. spacer 20.58|3606345|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to MH271308 (Microbacterium phage Percival, complete genome) position: , mismatch: 11, identity: 0.676

ccccccttccccctccggcccgaccggcgatcga	CRISPR spacer
gtatctggacccctccagcccgaccggcgagcgt	Protospacer
 . .*.   *******.************* **

84. spacer 20.64|3606772|36|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.694

tcgaaaaagaatttgagagaaataaaagaagatttg	CRISPR spacer
atggtcaaaaattcgagagaaataaaagaagaagaa	Protospacer
 .*.  **.****.******************   .

85. spacer 22.2|3611698|34|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039925 (Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129b, complete sequence) position: , mismatch: 11, identity: 0.676

actcgctaaagtctttggggggagatgtagaaat	CRISPR spacer
ttggtctaaagtctttggggggcgaggtattcag	Protospacer
 .   ***************** ** ***   *

86. spacer 20.56|3606201|35|NZ_CP012375|PILER-CR,CRISPRCasFinder,CRT matches to LC547238 (Entercoccus phage phiM1EF2 DNA, nearly complete genome) position: , mismatch: 12, identity: 0.657

tttattagattttttttgtgctatcatagtagaat	CRISPR spacer
acaggcgtcttttttttgtgctataatagaagaaa	Protospacer
 . . ..  *************** **** ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1763986 : 1819034

Agrobacterium_phage(20.0%)

transposase,tRNA,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046661787.1\|1763986_1764523_-\|protease	aspartyl protease	NA	NA	NA	NA
WP_002798810.1\|1764606_1764948_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_046661788.1\|1765129_1766656_+	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_066029753.1\|1766948_1768250_-	hypothetical protein	NA	NA	NA	NA
WP_002740194.1\|1768448_1768877_+	hypothetical protein	NA	NA	NA	NA
WP_002793040.1\|1768898_1769483_-	pseudouridine synthase	NA	NA	NA	NA
WP_046661790.1\|1769642_1770431_-	ABC transporter permease	NA	NA	NA	NA
WP_066029754.1\|1771357_1773457_+	protein kinase	M1HGF9	Acanthocystis_turfacea_Chlorella_virus	1.5e-08	22.7
WP_061432967.1\|1773850_1774045_+	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA
WP_002803697.1\|1774041_1774455_+	PIN domain nuclease	NA	NA	NA	NA
WP_066029755.1\|1774438_1774792_-	DUF5615 family PIN-like protein	NA	NA	NA	NA
WP_002752166.1\|1774788_1775025_-	DUF433 domain-containing protein	NA	NA	NA	NA
WP_002797375.1\|1775220_1775394_+	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA
WP_066029756.1\|1775462_1777373_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_002758604.1\|1777446_1778217_-	nickel pincer cofactor biosynthesis protein LarB	A0A288TYA6	Enterococcus_phage	1.4e-20	46.0
WP_066029757.1\|1778390_1780139_-	ribonuclease J	NA	NA	NA	NA
WP_066029758.1\|1780381_1781275_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_066029759.1\|1781499_1782537_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_046661798.1\|1782861_1784259_+	trigger factor	NA	NA	NA	NA
WP_002797385.1\|1784550_1785252_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	2.9e-52	57.1
WP_046661801.1\|1785262_1786597_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.0e-135	55.9
WP_004160464.1\|1786618_1786828_+	hypothetical protein	NA	NA	NA	NA
WP_046661802.1\|1786805_1787663_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_103672700.1\|1787678_1787903_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_071846438.1\|1788842_1789619_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_046661804.1\|1789878_1790073_-	hypothetical protein	NA	NA	NA	NA
WP_046663662.1\|1790416_1793131_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.8e-54	32.3
WP_046661805.1\|1793164_1794859_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_046661806.1\|1794938_1795676_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_046661807.1\|1795779_1795965_-	hypothetical protein	NA	NA	NA	NA
WP_002738203.1\|1796409_1796772_+	hypothetical protein	NA	NA	NA	NA
WP_002737941.1\|1796731_1797022_+	hypothetical protein	NA	NA	NA	NA
WP_046661808.1\|1797175_1798279_-	hypothetical protein	NA	NA	NA	NA
WP_046661809.1\|1798303_1799473_-	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_046661810.1\|1800144_1801095_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_046661811.1\|1801367_1802099_+	glutathione peroxidase	A0A1D8KSL1	Synechococcus_phage	2.7e-45	54.9
WP_046661812.1\|1802312_1802846_+	DNA starvation/stationary phase protection protein Dps	NA	NA	NA	NA
WP_046663665.1\|1802889_1804173_-	protein kinase	NA	NA	NA	NA
WP_002731861.1\|1804785_1804971_-	hypothetical protein	NA	NA	NA	NA
WP_103672701.1\|1805247_1805481_-\|transposase	transposase	NA	NA	NA	NA
WP_066029760.1\|1806011_1807829_-	DUF4101 domain-containing protein	A0A2H4UVE2	Bodo_saltans_virus	1.2e-12	26.5
WP_046661814.1\|1808328_1809111_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_002738764.1\|1811163_1811526_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046661816.1\|1811578_1812241_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_046661818.1\|1814152_1814773_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_002739211.1\|1814863_1815001_-	photosystem II reaction center protein K	NA	NA	NA	NA
WP_046661819.1\|1815051_1816176_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.8e-80	43.8
WP_046661820.1\|1816270_1816732_-	hypothetical protein	NA	NA	NA	NA
WP_004163379.1\|1816943_1817546_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	9.0e-55	59.5
WP_066029761.1\|1817603_1819034_-\|transposase	transposase	A0A191SB13	Nostoc_phage	4.7e-102	50.5

DBSCAN-SWA_2

1837898 : 1877906

Clostridium_phage(28.57%)

integrase,transposase,protease

attL 1861327:1861386|attR 1885881:1886637

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066029764.1\|1837898_1839179_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_066029765.1\|1839325_1839853_-	hypothetical protein	NA	NA	NA	NA
WP_066029766.1\|1840364_1841180_-	hypothetical protein	NA	NA	NA	NA
WP_046661838.1\|1841574_1842276_-	DUF4276 family protein	NA	NA	NA	NA
WP_066029767.1\|1842286_1843714_-	AAA family ATPase	NA	NA	NA	NA
WP_002781641.1\|1844116_1844647_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.2e-11	31.1
WP_066029768.1\|1844944_1845238_-	(2Fe-2S) ferredoxin domain-containing protein	NA	NA	NA	NA
WP_081310263.1\|1845424_1846126_+	hypothetical protein	NA	NA	NA	NA
WP_066029770.1\|1846214_1846556_+	thioredoxin fold domain-containing protein	A0A1J0GW78	Streptomyces_phage	1.0e-10	39.5
WP_066029771.1\|1846821_1847478_+	VWA domain-containing protein	NA	NA	NA	NA
WP_066029772.1\|1847491_1848250_+	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_002770523.1\|1848339_1848633_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_066029773.1\|1848629_1848965_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_046660511.1\|1849762_1850752_+\|transposase	transposase	NA	NA	NA	NA
WP_046661847.1\|1853226_1853979_-	TVP38/TMEM64 family protein	NA	NA	NA	NA
WP_066029774.1\|1854243_1855629_+	cytochrome P450	A0A0B5IYC9	Pandoravirus	1.2e-12	25.5
WP_066029775.1\|1855714_1856698_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_066029776.1\|1856741_1857200_+	DUF29 domain-containing protein	NA	NA	NA	NA
WP_066029777.1\|1857216_1857681_+	DUF29 domain-containing protein	NA	NA	NA	NA
WP_046661850.1\|1858110_1858374_-	hypothetical protein	NA	NA	NA	NA
WP_066029778.1\|1858372_1858882_+	ricin-type beta-trefoil lectin domain protein	NA	NA	NA	NA
WP_046661851.1\|1859109_1859556_+	PIN domain-containing protein	NA	NA	NA	NA
WP_046661852.1\|1859542_1859755_+	hypothetical protein	NA	NA	NA	NA
WP_046661853.1\|1860277_1860520_+	DUF433 domain-containing protein	NA	NA	NA	NA
WP_046663670.1\|1860603_1860987_+	DUF433 domain-containing protein	NA	NA	NA	NA
WP_046661854.1\|1860965_1861349_+	hypothetical protein	NA	NA	NA	NA
1861327:1861386	attL	NA	NA	NA	NA
WP_103672714.1\|1861364_1862058_+\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_080949805.1\|1862588_1862897_-	ASCH domain-containing protein	A0A068CCC0	Rhizobium_phage	3.3e-05	46.7
WP_046661856.1\|1864237_1865200_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_046661857.1\|1866254_1869275_-	hypothetical protein	NA	NA	NA	NA
WP_046661858.1\|1869434_1871669_-\|protease	M6 family metalloprotease domain-containing protein	A0A1L2BY89	Clostridium_phage	2.8e-154	52.9
WP_046661859.1\|1871740_1872064_-	hypothetical protein	A0A1L2BY89	Clostridium_phage	3.1e-17	50.0
WP_066029779.1\|1872444_1874289_-	alpha-amylase	NA	NA	NA	NA
WP_052734173.1\|1875143_1875416_+	hypothetical protein	NA	NA	NA	NA
WP_080694069.1\|1875420_1875858_+	PIN domain-containing protein	NA	NA	NA	NA
WP_071846442.1\|1876026_1876398_+	hypothetical protein	NA	NA	NA	NA
WP_046661862.1\|1876793_1877906_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0R8V9X2	Thermobifida_phage	6.4e-123	59.9
1885881:1886637	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1947734 : 1996211

Cedratvirus(11.11%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046661918.1\|1947734_1948628_+\|transposase	transposase	NA	NA	NA	NA
WP_046661919.1\|1949154_1949934_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_046661920.1\|1949975_1950503_-	hypothetical protein	NA	NA	NA	NA
WP_046661921.1\|1950872_1951328_+	shikimate 5-dehydrogenase	NA	NA	NA	NA
WP_046661922.1\|1951385_1952927_+	protein kinase	A0A285Q1R7	Cedratvirus	3.5e-10	28.9
WP_052734174.1\|1952975_1953788_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_046661924.1\|1954545_1955541_-	DNA (cytosine-5-)-methyltransferase	Q6DMX0	Streptococcus_phage	5.1e-55	38.5
WP_046661926.1\|1955766_1956003_-	DUF4926 domain-containing protein	NA	NA	NA	NA
WP_002764286.1\|1956015_1956336_-	hypothetical protein	NA	NA	NA	NA
WP_002743274.1\|1956385_1956580_-	hypothetical protein	NA	NA	NA	NA
WP_002800319.1\|1956573_1956774_-	hypothetical protein	NA	NA	NA	NA
WP_149039044.1\|1956777_1956903_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_046661927.1\|1956989_1957781_+\|transposase	transposase	NA	NA	NA	NA
WP_046661928.1\|1959318_1959705_-	hypothetical protein	NA	NA	NA	NA
WP_046661929.1\|1959852_1961964_-	TIGR00300 family protein	NA	NA	NA	NA
WP_046661930.1\|1962137_1963901_-	SWIM zinc finger domain-containing protein	NA	NA	NA	NA
WP_046661931.1\|1964016_1964298_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_046661932.1\|1964311_1965004_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_046661933.1\|1965059_1965908_-	M28 family peptidase	NA	NA	NA	NA
WP_066029788.1\|1966017_1967394_+	flavin monoamine oxidase family protein	A0A0H3TLT2	Faustovirus	3.0e-05	39.5
WP_066029789.1\|1967479_1970005_-	NTP transferase domain-containing protein	I7I009	Enterobacteria_phage	1.6e-12	30.9
WP_043998683.1\|1970211_1970403_+	hypothetical protein	NA	NA	NA	NA
WP_002795807.1\|1970943_1971219_-	hypothetical protein	NA	NA	NA	NA
WP_046661936.1\|1971560_1972109_-	RDD domain-containing protein	NA	NA	NA	NA
WP_066029790.1\|1972317_1972677_+	hypothetical protein	NA	NA	NA	NA
WP_066029791.1\|1972724_1973882_+	8-amino-7-oxononanoate synthase	D2TEZ5	Emiliania_huxleyi_virus	1.6e-39	30.5
WP_066029792.1\|1973991_1975230_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	7.5e-64	38.0
WP_046661939.1\|1975201_1975795_-\|transposase	IS607 family transposase	F9VHY9	Thermus_phage	3.9e-50	58.5
WP_071846449.1\|1975861_1976044_-	hypothetical protein	NA	NA	NA	NA
WP_046661940.1\|1976030_1976273_-	antitoxin family protein	NA	NA	NA	NA
WP_046661941.1\|1976661_1977090_-	hypothetical protein	NA	NA	NA	NA
WP_002795799.1\|1977082_1977298_-	hypothetical protein	NA	NA	NA	NA
WP_046661942.1\|1977567_1977972_-	hypothetical protein	NA	NA	NA	NA
WP_046661943.1\|1978071_1978461_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_002739406.1\|1978453_1978693_-	hypothetical protein	NA	NA	NA	NA
WP_046661944.1\|1979041_1980493_-	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	5.7e-47	35.6
WP_046661945.1\|1980721_1980907_+	DUF3285 domain-containing protein	NA	NA	NA	NA
WP_046661946.1\|1980918_1981431_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_046661947.1\|1981459_1981948_+	diacylglycerol kinase family protein	NA	NA	NA	NA
WP_002738935.1\|1982551_1982791_+	DUF4327 family protein	NA	NA	NA	NA
WP_046661948.1\|1983019_1984210_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_046661949.1\|1984496_1985777_+	AAA family ATPase	C7BGE8	Burkholderia_phage	3.1e-12	21.9
WP_046661950.1\|1985773_1986406_+	TIGR02646 family protein	NA	NA	NA	NA
WP_162496089.1\|1987005_1988706_-	hypothetical protein	NA	NA	NA	NA
WP_046661952.1\|1988644_1988950_+	hypothetical protein	NA	NA	NA	NA
WP_004163638.1\|1989146_1989296_+	hypothetical protein	NA	NA	NA	NA
WP_066029793.1\|1989375_1989756_-	hypothetical protein	NA	NA	NA	NA
WP_046661954.1\|1989815_1990181_-	hypothetical protein	NA	NA	NA	NA
WP_046661955.1\|1990612_1991599_+	porphobilinogen synthase	NA	NA	NA	NA
WP_081310265.1\|1991595_1991826_-\|transposase	transposase	NA	NA	NA	NA
WP_066029794.1\|1991837_1993955_-	hypothetical protein	NA	NA	NA	NA
WP_066029795.1\|1994031_1995369_+	proton extrusion protein PcxA	NA	NA	NA	NA
WP_066029796.1\|1995404_1996211_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA

DBSCAN-SWA_4

3493464 : 3547960

Bacteriophage(12.5%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066030081.1\|3493464_3494724_-\|transposase	transposase	A0A1L2BWU7	Bacteriophage	9.0e-89	46.6
WP_103672723.1\|3494872_3495205_+\|transposase	IS200/IS605 family transposase	A0A7E6	Microcystis_virus	2.7e-21	51.0
WP_066030083.1\|3495249_3496344_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_046662987.1\|3496494_3496833_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_002782697.1\|3497042_3497270_+	hypothetical protein	NA	NA	NA	NA
WP_046662988.1\|3497269_3497719_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_066030084.1\|3497942_3500966_+	exonuclease subunit SbcC	G3MAB6	Bacillus_virus	8.6e-21	30.9
WP_046662990.1\|3500985_3501240_+	MoaD/ThiS family protein	NA	NA	NA	NA
WP_046662991.1\|3501309_3503592_+	single-stranded-DNA-specific exonuclease RecJ	A0A1W6JL19	Lactococcus_phage	2.2e-29	28.1
WP_002782691.1\|3503647_3504595_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_046662992.1\|3504769_3505759_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_046662993.1\|3505896_3506187_+	nucleotidyltransferase	NA	NA	NA	NA
WP_046662994.1\|3506176_3506530_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_046662995.1\|3506741_3507011_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_046662996.1\|3507045_3507435_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_008196984.1\|3507630_3508551_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_046662997.1\|3508578_3510069_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_002800640.1\|3510248_3510647_+	DUF4164 domain-containing protein	NA	NA	NA	NA
WP_046662998.1\|3510756_3511335_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_052734193.1\|3511429_3511852_+	hypothetical protein	NA	NA	NA	NA
WP_012264300.1\|3511921_3512380_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_046663000.1\|3512479_3513064_+	chorismate-binding protein	C7BVI4	Synechococcus_phage	7.0e-20	35.3
WP_046663001.1\|3513086_3513887_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_046663002.1\|3514025_3514580_+	hypothetical protein	NA	NA	NA	NA
WP_002782546.1\|3514580_3514898_-	hypothetical protein	NA	NA	NA	NA
WP_066030085.1\|3515017_3515911_-	beta-carotene hydroxylase	NA	NA	NA	NA
WP_004163265.1\|3516074_3516494_-	transcriptional regulator	A0A222YXG1	Escherichia_phage	1.3e-07	34.4
WP_066030086.1\|3516477_3516777_-	type II toxin-antitoxin system HigB family toxin	F5A3A2	Riemerella_phage	3.0e-11	36.8
WP_066030087.1\|3517177_3517741_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_162496092.1\|3518015_3518153_-	PIN domain-containing protein	NA	NA	NA	NA
WP_066030088.1\|3518142_3518364_-	hypothetical protein	NA	NA	NA	NA
WP_066030089.1\|3518865_3523440_+	glutamate synthase large subunit	NA	NA	NA	NA
WP_066030257.1\|3523536_3524688_+	hypothetical protein	NA	NA	NA	NA
WP_052275296.1\|3524872_3525112_+	hypothetical protein	NA	NA	NA	NA
WP_052275297.1\|3525111_3525540_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_066030090.1\|3525608_3525773_+	DUF4926 domain-containing protein	NA	NA	NA	NA
WP_002791634.1\|3525868_3526093_+	hypothetical protein	NA	NA	NA	NA
WP_066030091.1\|3526082_3526505_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_066030092.1\|3526565_3526826_+	hypothetical protein	NA	NA	NA	NA
WP_046663009.1\|3526894_3527230_+	hypothetical protein	NA	NA	NA	NA
WP_046663010.1\|3527226_3527643_+	PIN domain-containing protein	NA	NA	NA	NA
WP_071846486.1\|3527759_3528308_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_002754005.1\|3530675_3531020_-	hypothetical protein	NA	NA	NA	NA
WP_046663011.1\|3531211_3531946_-	D-alanyl-D-alanine carboxypeptidase family protein	NA	NA	NA	NA
WP_046663012.1\|3531977_3533369_-	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_046663013.1\|3533567_3534518_+	prolyl aminopeptidase	NA	NA	NA	NA
WP_080949779.1\|3536257_3537208_+\|transposase	IS630 family transposase	A0A2H4UV16	Bodo_saltans_virus	1.0e-20	29.2
WP_046663015.1\|3538165_3539179_-	hypothetical protein	NA	NA	NA	NA
WP_046663016.1\|3539428_3540361_+	ATP-binding protein	NA	NA	NA	NA
WP_066030093.1\|3540589_3541642_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_066030094.1\|3541634_3542729_+	ATP-binding protein	NA	NA	NA	NA
WP_066030095.1\|3542721_3543936_+	hypothetical protein	NA	NA	NA	NA
WP_158657263.1\|3543830_3544247_+	hypothetical protein	NA	NA	NA	NA
WP_046663827.1\|3544524_3544845_+	TolC family protein	NA	NA	NA	NA
WP_103672714.1\|3544967_3545661_+\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_103672744.1\|3545725_3546049_+	type II toxin-antitoxin system PrlF family antitoxin	NA	NA	NA	NA
WP_046660474.1\|3546463_3547960_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

3564350 : 3632657

Bodo_saltans_virus(33.33%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046663024.1\|3564350_3564956_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_004269043.1\|3564952_3567286_-	hypothetical protein	NA	NA	NA	NA
WP_066030098.1\|3567299_3567971_-	DUF1822 family protein	NA	NA	NA	NA
WP_066030099.1\|3568087_3568663_-	hypothetical protein	NA	NA	NA	NA
WP_066030100.1\|3568941_3570255_+	hypothetical protein	NA	NA	NA	NA
WP_052734194.1\|3570278_3570854_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_046663028.1\|3571007_3571589_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_046663029.1\|3571742_3572423_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_052734197.1\|3572563_3573079_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_066030101.1\|3573147_3573696_+	hypothetical protein	NA	NA	NA	NA
WP_158657264.1\|3573890_3574316_+	DUF1295 domain-containing protein	NA	NA	NA	NA
WP_046663031.1\|3574386_3574785_+	hypothetical protein	NA	NA	NA	NA
WP_052734219.1\|3575979_3576792_-	hypothetical protein	NA	NA	NA	NA
WP_149976997.1\|3577181_3577496_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_066030104.1\|3577694_3578309_+	hypothetical protein	NA	NA	NA	NA
WP_071890152.1\|3578311_3578509_+	hypothetical protein	NA	NA	NA	NA
WP_066030105.1\|3578603_3578795_-	hypothetical protein	NA	NA	NA	NA
WP_149039036.1\|3579094_3579277_+	hypothetical protein	NA	NA	NA	NA
WP_149039038.1\|3579828_3580362_+	hypothetical protein	NA	NA	NA	NA
WP_046663038.1\|3580921_3581125_+	hypothetical protein	NA	NA	NA	NA
WP_046663039.1\|3581250_3582663_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_158524812.1\|3583069_3583216_-	hypothetical protein	NA	NA	NA	NA
WP_046663040.1\|3584736_3586131_-	DUF2252 domain-containing protein	NA	NA	NA	NA
WP_046663835.1\|3586570_3588274_-	solute carrier 26 family protein	NA	NA	NA	NA
WP_046663041.1\|3588573_3590538_-	flavin-dependent dehydrogenase	NA	NA	NA	NA
WP_046663042.1\|3590683_3590926_+	hypothetical protein	NA	NA	NA	NA
WP_046663043.1\|3590933_3591749_+	DUF2993 domain-containing protein	NA	NA	NA	NA
WP_046663045.1\|3592745_3593807_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_080949780.1\|3593835_3594318_+	cytochrome c	NA	NA	NA	NA
WP_046663046.1\|3594657_3596811_+	O-linked N-acetylglucosamine transferase	NA	NA	NA	NA
WP_046663047.1\|3596828_3598994_+	O-linked N-acetylglucosamine transferase	NA	NA	NA	NA
WP_103672725.1\|3599578_3600470_+\|transposase	IS630 family transposase	A0A2H4UV16	Bodo_saltans_virus	9.7e-21	29.2
WP_046661002.1\|3600794_3602021_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	1.6e-26	26.8
WP_046660896.1\|3607916_3609065_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_046660474.1\|3610024_3611521_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_046663050.1\|3613727_3614000_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_066030106.1\|3614012_3615017_-	type I-D CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_066030107.1\|3615022_3615616_-	CRISPR-associated protein Cas4	NA	NA	NA	NA
WP_046663053.1\|3615618_3616452_-	CRISPR-associated endoribonuclease Cas6	NA	NA	NA	NA
WP_046663054.1\|3616451_3617018_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_046663055.1\|3617058_3619794_-	CRISPR-associated helicase Cas3'	NA	NA	NA	NA
WP_046663056.1\|3619786_3620611_-	hypothetical protein	NA	NA	NA	NA
WP_012266052.1\|3620614_3621508_-	hypothetical protein	NA	NA	NA	NA
WP_066030108.1\|3621510_3624042_-	hypothetical protein	NA	NA	NA	NA
WP_158657265.1\|3624129_3624294_-	hypothetical protein	NA	NA	NA	NA
WP_066030109.1\|3624829_3625687_+	WYL domain-containing protein	NA	NA	NA	NA
WP_008197426.1\|3626892_3627276_+	DUF4346 domain-containing protein	NA	NA	NA	NA
WP_046663062.1\|3627561_3628425_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_046663063.1\|3628695_3629205_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_046663064.1\|3629201_3630329_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_046663065.1\|3630464_3631403_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_066030110.1\|3631544_3632657_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0R8V9X2	Thermobifida_phage	1.1e-122	61.0

DBSCAN-SWA_6

4207007 : 4270036

Staphylococcus_phage(11.76%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046663482.1\|4207007_4208252_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0R8V9X2	Thermobifida_phage	6.2e-74	44.2
WP_046663483.1\|4208762_4209248_+	hypothetical protein	NA	NA	NA	NA
WP_046663484.1\|4209321_4210695_+	YvcK family protein	A1IMD5	Streptococcus_phage	3.5e-46	35.5
WP_046663485.1\|4211220_4211511_-	DUF2288 family protein	NA	NA	NA	NA
WP_046663486.1\|4211646_4212219_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_066030208.1\|4212250_4213534_+	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_046663488.1\|4213541_4214714_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_046663489.1\|4214732_4215452_+	DevA family ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.4e-84	68.3
WP_046663490.1\|4215808_4217731_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_046663491.1\|4218153_4218588_+	hypothetical protein	NA	NA	NA	NA
WP_046663492.1\|4218584_4218998_-	SnoaL-like domain-containing protein	NA	NA	NA	NA
WP_046663493.1\|4219053_4220163_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	3.7e-30	27.2
WP_046663494.1\|4220630_4221263_+	restriction endonuclease subunit R	NA	NA	NA	NA
WP_046663495.1\|4221482_4222613_+	SpoIID/LytB domain-containing protein	NA	NA	NA	NA
WP_066030209.1\|4222744_4226308_+	methionine synthase	NA	NA	NA	NA
WP_066030210.1\|4226541_4227144_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_066030211.1\|4227146_4228148_+	hypothetical protein	NA	NA	NA	NA
WP_002749933.1\|4228380_4229439_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_046663499.1\|4229496_4230240_-	hypothetical protein	NA	NA	NA	NA
WP_046663500.1\|4230306_4231983_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase RibB/GTP cyclohydrolase II RibA	A0A2H4PQS2	Staphylococcus_phage	3.0e-100	47.7
WP_002736362.1\|4232120_4232999_-	photosystem I reaction center subunit XII	NA	NA	NA	NA
WP_046663501.1\|4233267_4233756_-	phycocyanin subunit alpha	NA	NA	NA	NA
WP_002771747.1\|4233822_4234341_-	phycocyanin subunit beta	NA	NA	NA	NA
WP_046663502.1\|4234954_4236178_+	amidohydrolase	NA	NA	NA	NA
WP_046663503.1\|4236256_4237144_+	acetylglutamate kinase	NA	NA	NA	NA
WP_002759020.1\|4237312_4237534_+	DUF4327 family protein	NA	NA	NA	NA
WP_046663504.1\|4237577_4238798_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_046663506.1\|4239221_4239830_+\|transposase	IS607 family transposase	A0A7Q0	Microcystis_virus	4.6e-107	98.5
WP_046663507.1\|4239807_4240980_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A7P9	Microcystis_virus	2.0e-215	97.7
WP_066030212.1\|4241047_4242721_+	DNA methyltransferase	A0A2L1IZ21	Streptomyces_phage	8.7e-124	43.6
WP_046663509.1\|4243882_4244206_+	iron-sulfur cluster assembly accessory protein	NA	NA	NA	NA
WP_066030213.1\|4244206_4245274_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_002735746.1\|4245319_4245583_-	DUF3134 domain-containing protein	NA	NA	NA	NA
WP_046663511.1\|4245579_4246002_-	8-oxo-dGTP diphosphatase MutT	NA	NA	NA	NA
WP_002760450.1\|4246105_4246429_+	30S ribosomal protein PSRP-3	NA	NA	NA	NA
WP_046663512.1\|4246649_4247066_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_066030214.1\|4247140_4248589_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_158657269.1\|4249151_4249310_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_046663515.1\|4250130_4251756_-	chaperonin GroEL	A0A219YK78	uncultured_virus	7.1e-155	54.7
WP_002737272.1\|4251802_4252114_-	co-chaperone GroES	A0A221S386	uncultured_virus	5.9e-18	53.3
WP_002804204.1\|4252970_4253399_-	hypothetical protein	NA	NA	NA	NA
WP_066030217.1\|4253900_4256222_-	DNA helicase PcrA	A7KV33	Bacillus_phage	4.9e-117	36.9
WP_066030218.1\|4256547_4257798_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	5.7e-120	54.1
WP_066030219.1\|4258343_4258898_-	phycobiliprotein lyase	NA	NA	NA	NA
WP_066030220.1\|4258925_4259909_-	glycosyltransferase family 2 protein	A0A2H5BFL1	Salmonella_phage	7.3e-78	48.2
WP_081310282.1\|4259939_4261157_-	glycosyltransferase	NA	NA	NA	NA
WP_046663519.1\|4261159_4262119_-	GDP-mannose 4,6-dehydratase	A0A0E3F1J3	Synechococcus_phage	1.5e-72	46.6
WP_046663520.1\|4262133_4263054_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	6.9e-06	26.7
WP_046663521.1\|4263319_4264303_+	glycosyltransferase family 2 protein	A0A0F7L2F7	uncultured_marine_virus	6.5e-10	28.2
WP_046663522.1\|4264435_4264792_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_046663523.1\|4264778_4265321_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_002759792.1\|4265482_4265809_+	hypothetical protein	NA	NA	NA	NA
WP_002804258.1\|4265805_4266414_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_046663524.1\|4266429_4267689_-\|transposase	transposase	A0A1L2BWU7	Bacteriophage	2.6e-88	46.4
WP_046663525.1\|4268288_4268945_-	endonuclease III	NA	NA	NA	NA
WP_046663526.1\|4268944_4270036_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP025929

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP025929_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025929_1

587-2233

TypeIII

Consensus_repeat	Method
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRT

22 spacers

cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

The CRISPR arrays of NZ_CP025929_1

>merge|NZ_CP025929|1|587-2233|PILER-CR,CRISPRCasFinder,CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTTTTTGCGGTATTTTTGGTTACTTTGTATCATTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGATCCTTTAGGAGAATTTAACTCTAACGCTTGGGCCGCCTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAAAGAGTAACCGCTGTTTTTGCTTGCGTTCCGAATAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGACTAGTTGTTCTGGGGCCCAAAAAGCCTTGGGGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAATGCAACCGCGGCACCCAGGACTTTTGTGCCATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTTTAAAGGGGGGGGGTGTTAGTCCCCTACGATGCATACCCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAACCATCGCTTTGCCACACCAAACAAATCTTTCGATTATGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTATGTACACGCCCTTGAGTGCTTGCTCGTTTTTACTTTGGGGACTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGCTTAATATCGTTCTCGGCTCCCTTCACTTGAATTGTAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAAAAAGTGAAAAACAACGCAAAACGCACTAAACTTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACATGGTAAATCGGGGACGCCATCAAATCCAGCGCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTCCCACGGTGGGGAGCATGGGCCCATCCCAGTTGCGGGTAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTCACCCCTTGTGGTATGACAAAGTAAACGGTGGCATTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACATTTCTGCATAGTGTCGAACGGCACAGTTTGCTGGGAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGTCCTTAAGGATAAGCTTCCAGCTCCATAGGAGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGGTTAATAAAACCTACCAAAGTTTTGGGTAGGTCCTCCCCGGAGAGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTAGGAGCACAGCTGCTTCTGTTGTCTGCCGATTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACATGAAGTGCCCCATCGCTTCTACTAACTCGGGCCTCTCTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGGTTAATCGTGAACCAAGCCACGAAACCCCGTGTGGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCACGATTTCTATTGCTGGAGATTCTCTTAGAGGTTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGGATTTGGTCCTCGGGAAGTTTTACAGTGGTTCTTTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAATGTACGGAACGGGCCTCAAGGGTTCTTCCGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACA

>NZ_CP025929|1|1|587-2232|PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTGCGGTATTTTTGGTTACTTTGTATCATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGATCCTTTAGGAGAATTTAACTCTAACGCTTGGGCCGCCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGAGTAACCGCTGTTTTTGCTTGCGTTCCGAATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACTAGTTGTTCTGGGGCCCAAAAAGCCTTGGGGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGCAACCGCGGCACCCAGGACTTTTGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTAAAGGGGGGGGGTGTTAGTCCCCTACGATGCATACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAACCATCGCTTTGCCACACCAAACAAATCTTTCGATTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTATGTACACGCCCTTGAGTGCTTGCTCGTTTTTACTTTGGGGACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTTAATATCGTTCTCGGCTCCCTTCACTTGAATTGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAAAGTGAAAAACAACGCAAAACGCACTAAACTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGTAAATCGGGGACGCCATCAAATCCAGCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCCCACGGTGGGGAGCATGGGCCCATCCCAGTTGCGGGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCACCCCTTGTGGTATGACAAAGTAAACGGTGGCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACATTTCTGCATAGTGTCGAACGGCACAGTTTGCTGGGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCCTTAAGGATAAGCTTCCAGCTCCATAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATAAAACCTACCAAAGTTTTGGGTAGGTCCTCCCCGGAGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTAGGAGCACAGCTGCTTCTGTTGTCTGCCGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGAAGTGCCCCATCGCTTCTACTAACTCGGGCCTCTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATCGTGAACCAAGCCACGAAACCCCGTGTGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGATTTCTATTGCTGGAGATTCTCTTAGAGGTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGGATTTGGTCCTCGGGAAGTTTTACAGTGGTTCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGTACGGAACGGGCCTCAAGGGTTCTTCCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

>NZ_CP025929|1|1|587-2233|CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTGCGGTATTTTTGGTTACTTTGTATCATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGATCCTTTAGGAGAATTTAACTCTAACGCTTGGGCCGCCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGAGTAACCGCTGTTTTTGCTTGCGTTCCGAATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACTAGTTGTTCTGGGGCCCAAAAAGCCTTGGGGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGCAACCGCGGCACCCAGGACTTTTGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTAAAGGGGGGGGGTGTTAGTCCCCTACGATGCATACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAACCATCGCTTTGCCACACCAAACAAATCTTTCGATTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTATGTACACGCCCTTGAGTGCTTGCTCGTTTTTACTTTGGGGACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTTAATATCGTTCTCGGCTCCCTTCACTTGAATTGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAAAGTGAAAAACAACGCAAAACGCACTAAACTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGTAAATCGGGGACGCCATCAAATCCAGCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCCCACGGTGGGGAGCATGGGCCCATCCCAGTTGCGGGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCACCCCTTGTGGTATGACAAAGTAAACGGTGGCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACATTTCTGCATAGTGTCGAACGGCACAGTTTGCTGGGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCCTTAAGGATAAGCTTCCAGCTCCATAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATAAAACCTACCAAAGTTTTGGGTAGGTCCTCCCCGGAGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTAGGAGCACAGCTGCTTCTGTTGTCTGCCGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGAAGTGCCCCATCGCTTCTACTAACTCGGGCCTCTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATCGTGAACCAAGCCACGAAACCCCGTGTGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGATTTCTATTGCTGGAGATTCTCTTAGAGGTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGGATTTGGTCCTCGGGAAGTTTTACAGTGGTTCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGTACGGAACGGGCCTCAAGGGTTCTTCCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACA

>NZ_CP025929|1|1|587-2232|CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTGCGGTATTTTTGGTTACTTTGTATCATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGATCCTTTAGGAGAATTTAACTCTAACGCTTGGGCCGCCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGAGTAACCGCTGTTTTTGCTTGCGTTCCGAATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACTAGTTGTTCTGGGGCCCAAAAAGCCTTGGGGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGCAACCGCGGCACCCAGGACTTTTGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTAAAGGGGGGGGGTGTTAGTCCCCTACGATGCATACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAACCATCGCTTTGCCACACCAAACAAATCTTTCGATTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTATGTACACGCCCTTGAGTGCTTGCTCGTTTTTACTTTGGGGACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTTAATATCGTTCTCGGCTCCCTTCACTTGAATTGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAAAGTGAAAAACAACGCAAAACGCACTAAACTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGTAAATCGGGGACGCCATCAAATCCAGCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCCCACGGTGGGGAGCATGGGCCCATCCCAGTTGCGGGTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCACCCCTTGTGGTATGACAAAGTAAACGGTGGCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACATTTCTGCATAGTGTCGAACGGCACAGTTTGCTGGGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCCTTAAGGATAAGCTTCCAGCTCCATAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATAAAACCTACCAAAGTTTTGGGTAGGTCCTCCCCGGAGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTAGGAGCACAGCTGCTTCTGTTGTCTGCCGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGAAGTGCCCCATCGCTTCTACTAACTCGGGCCTCTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTAATCGTGAACCAAGCCACGAAACCCCGTGTGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGATTTCTATTGCTGGAGATTCTCTTAGAGGTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGGATTTGGTCCTCGGGAAGTTTTACAGTGGTTCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATGTACGGAACGGGCCTCAAGGGTTCTTCCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025929.1\|WP_103672747.1\|8010_8850_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672871.1\|2560_3394_+\|transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP025929.1\|WP_046660896.1\|4105_5254_+\|IS4-family-transposase	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672749.1\|10818_11214_-\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
NZ_CP025929.1\|WP_103672752.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
NZ_CP025929.1\|WP_103672872.1\|12124_13351_-\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP025929.1\|WP_103672748.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|213662
NZ_CP025929.1\|WP_103672750.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|274210
NZ_CP025929.1\|WP_103672751.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_CP025929.1\|WP_046660474.1\|6151_7648_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319

Protein	Function_ID	Function_description	E-value
NZ_CP025929.1\|WP_103672871.1\|2560_3394_+\|transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.40929e-32
NZ_CP025929.1\|WP_103672748.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	gnl\|CDD\|213662	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1791 of Thermotoga maritima, is designated Cmr6 [sic], for CRISPR/Cas Ramp Module protein 6. This family is both closely related to and frequently encoded next to the TM1792 family of Cas proteins described by TIGR01867. The two proteins are fused in an example from Methanopyrus kandleri.	3.7043e-18
NZ_CP025929.1\|WP_103672752.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.10585e-85
NZ_CP025929.1\|WP_103672872.1\|12124_13351_-\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.96166e-37
NZ_CP025929.1\|WP_103672750.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.8118e-32
NZ_CP025929.1\|WP_103672751.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.05122e-37
NZ_CP025929.1\|WP_046660474.1\|6151_7648_-\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>NZ_CP025929.1|WP_103672871.1|2560_3394_+|transposase
MLVYLRHHLSFQILGLMFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRNYELIVDSAEQPVERPTDYQEQKIYYSGKQRRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRETLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEWEQSGEVIDVIISHSFPSKFVLSLKTLINRFLELILTLGLICLSSLL
>NZ_CP025929.1|WP_046660896.1|4105_5254_+|IS4-family-transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>NZ_CP025929.1|WP_046660474.1|6151_7648_-|IS5-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>NZ_CP025929.1|WP_103672747.1|8010_8850_+|hypothetical-protein
MSNSSKLSLVLAEVDSVQFFTDAATGRSGISQSGLAALCGVTKQALSKLTKSLSTKCPSIWLKPIQGQVDDLSTRTETGILLYYDQLALAIIKHYAFSGREQAQLVLDKFALIGFNAWVQRMTGWQEPEKPTLNADPTCVLDLLEAHTRRSESLNRTIHTAIHQQINAIKDTLKVLEGRLESSETITIEAVKTTTPQKNEEITKVAVRRLKGEGSGSIHWRTYTKNGRQYRQAFFHYELWEGGDRLIKSCKYIPKEKVAAIQDLQTQKASIVEILRVLS
>NZ_CP025929.1|WP_103672748.1|8935_10822_-|CRISPR-associated-protein-Cmr6
MTAQQEWQKFLEKLQKDKNPLYDLYKDSQLEIGTEITIYFSDEEAKKKASAKWQKLQAKFPPHWKNQKINFKVGQLAPSSITAMTRSTARTNNPTSRKLTSPLQTLNHRLFNNNDTAKPVLIEAAAADKTCQSLYQQLTEKTKRLADETLTVEFIWRLRVGGMRGFQELLLPVFHPVYGVPYIPSSSLKGVVRAWARQHRPEAEVNRLLGTLEDGIGCVQFLDAFPTAPCLTVDIANPQWSWENNRVCYQPVPHYLLSMEEPEILIGFTRTSRGKLEDVSKVKDWLQIALSAGIGSRVSAGYGRTSVASSLSHHSSHAFKLWTQGIYGANPPTKDNQYQGNNEFRPVAVRGTLRYWFRAVGLSIYSPQQCKDLEGRLFGTIEPQAQEGLIRISVDWEEEEGDRNRPYFCEGNILLEAKNQDALNLAEKLLQLSSHLAGIGRGSRRSLHWNNTIGLRGCHWEIDTKKLPRNQELWQQFLREVKDSLLALQSAIGDPANCTPGNPGNRSQDVLNSQAQIYLISCPSLKYPGTVNNWQNEGLGLKVRGKGLDFLYSSGFKGVNQEGNGNANVGGRISQRGETASTPSYVLIKSNFPPQQEPYQTVTIFGVNQRDRATFIQQLNSLNPMQIQ
>NZ_CP025929.1|WP_103672749.1|10818_11214_-|hypothetical-protein
MKLDSRQFSKQAHNALVEIKSELAVTYHKKASGLVQGLSTYISTWGLHRLSGDMQKFLGGTAEDTRYKGKVYQKFLTKLKEFSGADFDVNDQGTLIHMPLRKYTALNHLAIKLAKEWSFWSPAVLGEAEQS
>NZ_CP025929.1|WP_103672750.1|11210_12128_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNTYLTYLYLLTPLHTGGSADEGNLMGIAREVHTEFPYLPASSLRGKIRSALEPSNPQSEEEKALAKEVSQFFGQKIKDGQQPTEGEVWFAEATLLFFPIASLSHHLVWITCPLWLERWNRWLQKSPLTQLIQNCREQITEARPALVSFTPEPLYLQTAILQQNALGQLNTNDSNSISQSLQNLTNANGMINQLLKKLVIVDDEDCIALVETGLQREVRVALNEGEKTVKGGSFRSEEAIPPETVLFFPWGMKPVKQTENTQNIRAKTSELLKNKLQFGGLEGLGRGWCDLKTIETTETTTGSQK
>NZ_CP025929.1|WP_103672872.1|12124_13351_-|CRISPR-associated-protein
MYWYAITPLDVLLFREAKPFSPGESAWAKGLFPPFPSTVFQALRSTLSKDVKDLDFMGPFLLSPQDRLCFSTPKDLVAVKWGLKTQKIDEETEEEEPKEDNLDDTASDWHRTLRLQPVDRTDEAWEHLLFDEAGLAPMVAPFRELVEEENRREFFCRPYPWITAEALSEYLQGKELTDPTQFQEDPWNVQIMPHIQMQADKRQVKDEDGYFTEVAIRLKPGWRLVAGISIDLRETVVRLGGEGHRAIVIPFTLSDADQTLLNPKTNTTGDFAYLLTPGLAVKEEAVYGVYPCDWQSILAGCVSDRPLLWGGVSQIRRKLVISCGKENQERTTSQISLGSSSPNSEAKGDEEFALLPQRAFVPPGTVYIFNQIPSETEALLPKPESTGNWLTSFQKLNYGKLLWGNTPL
>NZ_CP025929.1|WP_103672751.1|13372_16375_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MIMPESESPINSRNFYCRKLCALLEDKSILQQLQSIHPEELQGQIEELPLQIASSSDRVNLGEAQGTNINSVKHPISGQTRNITSQDLRPEIPAEITSETDIEKLFWWFWRFYPELIRQNQNDFFLYPAHSILPDCPLHSYKSTVSALVGAMYPEHWQEGGKSQHLYLFLFTFSPVQEFIKASRKFVDFWAGSYLLHYLSVKLCWYIAETYGSDAVITPSLWSQEIIDALIVKKYPDFAANFASFQDGTSPVGRFDNGISTSLSTAGFPNVIMALVPGKEAARELGEKLKKCLIEEWSEIAKKVREDIKKRTLEFLKDTKNQQKIDEILLKEFLSEQEICKRDLKKWQIGHHGSCWEWNKLWEAQIEKTWETYWTAMPLGNPEQPLTINPTEENYQQWKQAQNAIAPPHLAESLPTTAEQNLYEQINTGTWWGALQARLGQSIQAVKNTRTWAIPTAPGDRSTLSGQFSAVHPQLHYHGQFKNGGGLSARSMRLFWRLMAEVYPGLFNGSEKLNAIELTKRMAWRYGGVAESLGINLGQEDDTNYDNLIRFPNLSSIAAARFTYEDFKKGGQKTRNYWNCLNTLINQQLPNKADTFASRTRGRPYQIPKVDRQINPENRNGQNFNGVMFSSKWLADDMNCNAQETATLRSLVEEAHKKAKFGEGSPADWWVIVLGDGDGMGKYVSGSKLKKYKEYLITDAIAENVKNHQDYPDLLATQKRMGPATHVGLNRALLDFSNRLVPYLTEERYCGKVVYSGGDDVMAVLPLADLLGYLRSLRAAWCADPDPEREFSTEGGYWTPKQTLQGLQQRPYFTMGDGATMSLGIVIAHKSVPLPTVLESLWTAEKDRAKKLYGKDGLCFRVIYGSGNTLEALMKGELLDLWWNFMQYDQQDLSALFYRLAEELPRHACVTESDRLLRKAAQVIINRRDQTLESHIQENLLNWLDQWENWAYQTYNQVNKNKTEKEVPLGTTEKDLANLLRFSAFWNDKRMQQMKWGETE
>NZ_CP025929.1|WP_103672752.1|16679_18098_-|TIGR03985-family-CRISPR-associated-protein
MSLPTITTLEELVPELARLANYPKSDQKQIDNFLNLIQNAVRLWIIEQSFYDFNSDFFVEIDQEWFDCITWIDKLWTKIPNVQNKKLEDLLLGEYPLFYQQKWQEQIIARYQLSSENLQQILSSHIFKVTQRTLRNNFKRLAQLNQPKLIKSASLKGHYKKVVSSSLNSLDNCNLIKHNNDIITENNWLSFLNDGLSTIAELLTTKINGHQRFFIQAEYIVPEALQDKVADWADNLKEFWKQSLISPIKIKYYSASKNITNYYIIYPVSIHYSQRAYYLYAFGETPDQNSSQALQWYGYRLERILSLKQIAWDFSDLTKRLRSQIHKNDKINHLYSPDYIQEQLELAYGFSFYREFNTMLLRFDQNYYQRHVKNTIRHSTFQKIENIQEVKKMIIEQIDSEIDNTKKIQREKLLAKVNCASEDVYYKLCYRVGDHNVIMRLRSWGPNVEVILPSDLRAQIKEYLEKNYKLYQ

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Crispr_ID: NZ_CP025929_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025929_2

3421-3965

TypeIII

Consensus_repeat	Method
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRT
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR

7 spacers

cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

The CRISPR arrays of NZ_CP025929_2

>merge|NZ_CP025929|2|3421-3965|CRISPRCasFinder,CRT,PILER-CR
TTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGTCGGGGTCGGGTCGGAGGTAGCAAAGGGCTATCTTTTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTTTGTTCACAGGTTTTGTGAATCCTTTTAGATCCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAAATGTGCGGAGAAATGCACCAATAGTAGACGTCCCTGAATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTAGGTTGCGTACAACCAAACGGAGCCCACATACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTAGGAGACACAAAGACCAGTAGAAGATAGAGTATCACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTGATCGAGGTGAGCGATCGAGTAACGGAGGTTCTGGTATGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGATAGCTCTCAATCCGGCGGGACGCCTCGAGATACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACC

>NZ_CP025929|2|2|3421-3965|CRISPRCasFinder
TTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCGGGGTCGGGTCGGAGGTAGCAAAGGGCTATCTTTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGTTCACAGGTTTTGTGAATCCTTTTAGATCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAATGTGCGGAGAAATGCACCAATAGTAGACGTCCCTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTAGGTTGCGTACAACCAAACGGAGCCCACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTAGGAGACACAAAGACCAGTAGAAGATAGAGTATCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGATCGAGGTGAGCGATCGAGTAACGGAGGTTCTGGTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATAGCTCTCAATCCGGCGGGACGCCTCGAGATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACC

>NZ_CP025929|2|2|3421-3964|CRT
TTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCGGGGTCGGGTCGGAGGTAGCAAAGGGCTATCTTTTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGTTCACAGGTTTTGTGAATCCTTTTAGATCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAATGTGCGGAGAAATGCACCAATAGTAGACGTCCCTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTAGGTTGCGTACAACCAAACGGAGCCCACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTAGGAGACACAAAGACCAGTAGAAGATAGAGTATCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGATCGAGGTGAGCGATCGAGTAACGGAGGTTCTGGTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATAGCTCTCAATCCGGCGGGACGCCTCGAGATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

>NZ_CP025929|2|2|3422-3964|PILER-CR
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTCGGGGTCGGGTCGGAGGTAGCAAAGGGCTATCTTTTCC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGTTCACAGGTTTTGTGAATCCTTTTAGATCCC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAATGTGCGGAGAAATGCACCAATAGTAGACGTCCCTGAATC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTAGGTTGCGTACAACCAAACGGAGCCCACATAC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTAGGAGACACAAAGACCAGTAGAAGATAGAGTATCACC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGATCGAGGTGAGCGATCGAGTAACGGAGGTTCTGGTATGC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATAGCTCTCAATCCGGCGGGACGCCTCGAGATAC
TTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025929.1\|WP_103672747.1\|8010_8850_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672871.1\|2560_3394_+\|transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP025929.1\|WP_046660896.1\|4105_5254_+\|IS4-family-transposase	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672753.1\|18176_19574_-\|ThiF-family-adenylyltransferase	unknown	unknown	gnl\|CDD\|366360
NZ_CP025929.1\|WP_103672749.1\|10818_11214_-\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
NZ_CP025929.1\|WP_103672752.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
NZ_CP025929.1\|WP_103672872.1\|12124_13351_-\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP025929.1\|WP_103672748.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|213662
NZ_CP025929.1\|WP_103672750.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|274210
NZ_CP025929.1\|WP_103672751.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_CP025929.1\|WP_046660474.1\|6151_7648_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319

Protein	Function_ID	Function_description	E-value
NZ_CP025929.1\|WP_103672871.1\|2560_3394_+\|transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.40929e-32
NZ_CP025929.1\|WP_103672748.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	gnl\|CDD\|213662	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1791 of Thermotoga maritima, is designated Cmr6 [sic], for CRISPR/Cas Ramp Module protein 6. This family is both closely related to and frequently encoded next to the TM1792 family of Cas proteins described by TIGR01867. The two proteins are fused in an example from Methanopyrus kandleri.	3.7043e-18
NZ_CP025929.1\|WP_103672753.1\|18176_19574_-\|ThiF-family-adenylyltransferase	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	4.54173e-23
NZ_CP025929.1\|WP_103672752.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.10585e-85
NZ_CP025929.1\|WP_103672872.1\|12124_13351_-\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.96166e-37
NZ_CP025929.1\|WP_103672750.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.8118e-32
NZ_CP025929.1\|WP_103672751.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.05122e-37
NZ_CP025929.1\|WP_046660474.1\|6151_7648_-\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>NZ_CP025929.1|WP_103672871.1|2560_3394_+|transposase
MLVYLRHHLSFQILGLMFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRNYELIVDSAEQPVERPTDYQEQKIYYSGKQRRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRETLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEWEQSGEVIDVIISHSFPSKFVLSLKTLINRFLELILTLGLICLSSLL
>NZ_CP025929.1|WP_046660896.1|4105_5254_+|IS4-family-transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>NZ_CP025929.1|WP_046660474.1|6151_7648_-|IS5-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>NZ_CP025929.1|WP_103672747.1|8010_8850_+|hypothetical-protein
MSNSSKLSLVLAEVDSVQFFTDAATGRSGISQSGLAALCGVTKQALSKLTKSLSTKCPSIWLKPIQGQVDDLSTRTETGILLYYDQLALAIIKHYAFSGREQAQLVLDKFALIGFNAWVQRMTGWQEPEKPTLNADPTCVLDLLEAHTRRSESLNRTIHTAIHQQINAIKDTLKVLEGRLESSETITIEAVKTTTPQKNEEITKVAVRRLKGEGSGSIHWRTYTKNGRQYRQAFFHYELWEGGDRLIKSCKYIPKEKVAAIQDLQTQKASIVEILRVLS
>NZ_CP025929.1|WP_103672748.1|8935_10822_-|CRISPR-associated-protein-Cmr6
MTAQQEWQKFLEKLQKDKNPLYDLYKDSQLEIGTEITIYFSDEEAKKKASAKWQKLQAKFPPHWKNQKINFKVGQLAPSSITAMTRSTARTNNPTSRKLTSPLQTLNHRLFNNNDTAKPVLIEAAAADKTCQSLYQQLTEKTKRLADETLTVEFIWRLRVGGMRGFQELLLPVFHPVYGVPYIPSSSLKGVVRAWARQHRPEAEVNRLLGTLEDGIGCVQFLDAFPTAPCLTVDIANPQWSWENNRVCYQPVPHYLLSMEEPEILIGFTRTSRGKLEDVSKVKDWLQIALSAGIGSRVSAGYGRTSVASSLSHHSSHAFKLWTQGIYGANPPTKDNQYQGNNEFRPVAVRGTLRYWFRAVGLSIYSPQQCKDLEGRLFGTIEPQAQEGLIRISVDWEEEEGDRNRPYFCEGNILLEAKNQDALNLAEKLLQLSSHLAGIGRGSRRSLHWNNTIGLRGCHWEIDTKKLPRNQELWQQFLREVKDSLLALQSAIGDPANCTPGNPGNRSQDVLNSQAQIYLISCPSLKYPGTVNNWQNEGLGLKVRGKGLDFLYSSGFKGVNQEGNGNANVGGRISQRGETASTPSYVLIKSNFPPQQEPYQTVTIFGVNQRDRATFIQQLNSLNPMQIQ
>NZ_CP025929.1|WP_103672749.1|10818_11214_-|hypothetical-protein
MKLDSRQFSKQAHNALVEIKSELAVTYHKKASGLVQGLSTYISTWGLHRLSGDMQKFLGGTAEDTRYKGKVYQKFLTKLKEFSGADFDVNDQGTLIHMPLRKYTALNHLAIKLAKEWSFWSPAVLGEAEQS
>NZ_CP025929.1|WP_103672750.1|11210_12128_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNTYLTYLYLLTPLHTGGSADEGNLMGIAREVHTEFPYLPASSLRGKIRSALEPSNPQSEEEKALAKEVSQFFGQKIKDGQQPTEGEVWFAEATLLFFPIASLSHHLVWITCPLWLERWNRWLQKSPLTQLIQNCREQITEARPALVSFTPEPLYLQTAILQQNALGQLNTNDSNSISQSLQNLTNANGMINQLLKKLVIVDDEDCIALVETGLQREVRVALNEGEKTVKGGSFRSEEAIPPETVLFFPWGMKPVKQTENTQNIRAKTSELLKNKLQFGGLEGLGRGWCDLKTIETTETTTGSQK
>NZ_CP025929.1|WP_103672872.1|12124_13351_-|CRISPR-associated-protein
MYWYAITPLDVLLFREAKPFSPGESAWAKGLFPPFPSTVFQALRSTLSKDVKDLDFMGPFLLSPQDRLCFSTPKDLVAVKWGLKTQKIDEETEEEEPKEDNLDDTASDWHRTLRLQPVDRTDEAWEHLLFDEAGLAPMVAPFRELVEEENRREFFCRPYPWITAEALSEYLQGKELTDPTQFQEDPWNVQIMPHIQMQADKRQVKDEDGYFTEVAIRLKPGWRLVAGISIDLRETVVRLGGEGHRAIVIPFTLSDADQTLLNPKTNTTGDFAYLLTPGLAVKEEAVYGVYPCDWQSILAGCVSDRPLLWGGVSQIRRKLVISCGKENQERTTSQISLGSSSPNSEAKGDEEFALLPQRAFVPPGTVYIFNQIPSETEALLPKPESTGNWLTSFQKLNYGKLLWGNTPL
>NZ_CP025929.1|WP_103672751.1|13372_16375_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MIMPESESPINSRNFYCRKLCALLEDKSILQQLQSIHPEELQGQIEELPLQIASSSDRVNLGEAQGTNINSVKHPISGQTRNITSQDLRPEIPAEITSETDIEKLFWWFWRFYPELIRQNQNDFFLYPAHSILPDCPLHSYKSTVSALVGAMYPEHWQEGGKSQHLYLFLFTFSPVQEFIKASRKFVDFWAGSYLLHYLSVKLCWYIAETYGSDAVITPSLWSQEIIDALIVKKYPDFAANFASFQDGTSPVGRFDNGISTSLSTAGFPNVIMALVPGKEAARELGEKLKKCLIEEWSEIAKKVREDIKKRTLEFLKDTKNQQKIDEILLKEFLSEQEICKRDLKKWQIGHHGSCWEWNKLWEAQIEKTWETYWTAMPLGNPEQPLTINPTEENYQQWKQAQNAIAPPHLAESLPTTAEQNLYEQINTGTWWGALQARLGQSIQAVKNTRTWAIPTAPGDRSTLSGQFSAVHPQLHYHGQFKNGGGLSARSMRLFWRLMAEVYPGLFNGSEKLNAIELTKRMAWRYGGVAESLGINLGQEDDTNYDNLIRFPNLSSIAAARFTYEDFKKGGQKTRNYWNCLNTLINQQLPNKADTFASRTRGRPYQIPKVDRQINPENRNGQNFNGVMFSSKWLADDMNCNAQETATLRSLVEEAHKKAKFGEGSPADWWVIVLGDGDGMGKYVSGSKLKKYKEYLITDAIAENVKNHQDYPDLLATQKRMGPATHVGLNRALLDFSNRLVPYLTEERYCGKVVYSGGDDVMAVLPLADLLGYLRSLRAAWCADPDPEREFSTEGGYWTPKQTLQGLQQRPYFTMGDGATMSLGIVIAHKSVPLPTVLESLWTAEKDRAKKLYGKDGLCFRVIYGSGNTLEALMKGELLDLWWNFMQYDQQDLSALFYRLAEELPRHACVTESDRLLRKAAQVIINRRDQTLESHIQENLLNWLDQWENWAYQTYNQVNKNKTEKEVPLGTTEKDLANLLRFSAFWNDKRMQQMKWGETE
>NZ_CP025929.1|WP_103672752.1|16679_18098_-|TIGR03985-family-CRISPR-associated-protein
MSLPTITTLEELVPELARLANYPKSDQKQIDNFLNLIQNAVRLWIIEQSFYDFNSDFFVEIDQEWFDCITWIDKLWTKIPNVQNKKLEDLLLGEYPLFYQQKWQEQIIARYQLSSENLQQILSSHIFKVTQRTLRNNFKRLAQLNQPKLIKSASLKGHYKKVVSSSLNSLDNCNLIKHNNDIITENNWLSFLNDGLSTIAELLTTKINGHQRFFIQAEYIVPEALQDKVADWADNLKEFWKQSLISPIKIKYYSASKNITNYYIIYPVSIHYSQRAYYLYAFGETPDQNSSQALQWYGYRLERILSLKQIAWDFSDLTKRLRSQIHKNDKINHLYSPDYIQEQLELAYGFSFYREFNTMLLRFDQNYYQRHVKNTIRHSTFQKIENIQEVKKMIIEQIDSEIDNTKKIQREKLLAKVNCASEDVYYKLCYRVGDHNVIMRLRSWGPNVEVILPSDLRAQIKEYLEKNYKLYQ
>NZ_CP025929.1|WP_103672753.1|18176_19574_-|ThiF-family-adenylyltransferase
MNTQPKPQDILLHISPLMWKQFRQAMLDARQHREEVIGFFFCQRHQLSKKKVRYIPQAWVVPTADCYEHQSASGLVLKQQFHQYLLDTYLCALSKSSSSSKTRKLDVVHIHTHFGDATPSFSCVDDRYEAEYAKFLASCYQEKPRLISGVFNESLEKSKFRIWNRQGTNHTSIEFCRSWLTPINSNFSGEDTELIFARQKVFGETVQKHLNQLKVALIGCGGIGAVFAEQLARLGVKNWVFIDHDRLETVNLNRMPAATQEMVDQGWYKVHYLKWLIKRTYAIGSHVKALSLSVEDEKAKAEIATADLIVVATDNHRSRQVAQELALEYARPLVCLGTHIEVKPHHQPRLYCRVTVPPLGGGWCLMCGNIINLQQAALESAPTEIAAIASEAGYLQGIDAPAVYWLNNICASTGVGVIHGIISGFLPIDSGLDWIYDFPNSNWLKANIDHLQSSDCYFCSSLCTL

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Crispr_ID: NZ_CP025929_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025929_3

5285-6109

TypeIII

Consensus_repeat	Method
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRT

11 spacers

cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

The CRISPR arrays of NZ_CP025929_3

>merge|NZ_CP025929|3|5285-6109|PILER-CR,CRISPRCasFinder,CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTGCCTTGGCTTCATCTTCCGACAAATCCATGCACTCTTGCATGGATTCTTTTAACTTCTTAGCAAGTTTAATTAATAGAAACAAAATTGTACTCATCACTTGATGACAGAACTCAACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGGATGCTCAATCGCCCATACCTGACCTGCTGACAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTCTGCAAAACGGAGAACGATATAGTCATCGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTACAAAGGGAGAATTGTCTCACTTTTTCTTTTATTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTAGTTTCCACTAAATCCGATGCATCTTCGACATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTTTGGGGCCCAAAAGGCCTTGGGGAAGATAGCCCCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGATACTCCACAATAAAGGTGTTGAGATATGATTTCTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAATATAGGTAACGCTTCCATACCCATATTCCATACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTCTAATGCTCCGATACCGATTTTCTGCACACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTGCACACGCAACCAAAACAAAAACCCAAAACAGAAGACACTTTTAACTTCTTAGCAAGTTTAATTAGGGTTTGC

>NZ_CP025929|3|3|5285-6032|PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTGCCTTGGCTTCATCTTCCGACAAATCCATGCACTCTTGCATGGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATAGAAAC	AAAATTGTACTCATCACTTGATGACAGAACTCAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGATGCTCAATCGCCCATACCTGACCTGCTGACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTCTGCAAAACGGAGAACGATATAGTCATCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TACAAAGGGAGAATTGTCTCACTTTTTCTTTTATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTAGTTTCCACTAAATCCGATGCATCTTCGACAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGGGGCCCAAAAGGCCTTGGGGAAGATAGCCCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATACTCCACAATAAAGGTGTTGAGATATGATTTCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATATAGGTAACGCTTCCATACCCATATTCCATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTAATGCTCCGATACCGATTTTCTGCACA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

>NZ_CP025929|3|3|5285-6109|CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTGCCTTGGCTTCATCTTCCGACAAATCCATGCACTCTTGCATGGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATAGAAAC	AAAATTGTACTCATCACTTGATGACAGAACTCAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGATGCTCAATCGCCCATACCTGACCTGCTGACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTCTGCAAAACGGAGAACGATATAGTCATCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TACAAAGGGAGAATTGTCTCACTTTTTCTTTTATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTAGTTTCCACTAAATCCGATGCATCTTCGACAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGGGGCCCAAAAGGCCTTGGGGAAGATAGCCCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATACTCCACAATAAAGGTGTTGAGATATGATTTCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATATAGGTAACGCTTCCATACCCATATTCCATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTAATGCTCCGATACCGATTTTCTGCACA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTGCACACGCAACCAAAACAAAAACCCAAAACAGAAGACA
CTTTTAACTTCTTAGCAAGTTTAATTAGGGTTTGC

>NZ_CP025929|3|3|5285-6109|CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTGCCTTGGCTTCATCTTCCGACAAATCCATGCACTCTTGCATGGATT
CTTTTAACTTCTTAGCAAGTTTAATTAATAGAAAC	AAAATTGTACTCATCACTTGATGACAGAACTCAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGATGCTCAATCGCCCATACCTGACCTGCTGACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTCTGCAAAACGGAGAACGATATAGTCATCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TACAAAGGGAGAATTGTCTCACTTTTTCTTTTATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTAGTTTCCACTAAATCCGATGCATCTTCGACAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTGGGGCCCAAAAGGCCTTGGGGAAGATAGCCCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATACTCCACAATAAAGGTGTTGAGATATGATTTCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AATATAGGTAACGCTTCCATACCCATATTCCATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTAATGCTCCGATACCGATTTTCTGCACA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTGCACACGCAACCAAAACAAAAACCCAAAACAGAAGACA
CTTTTAACTTCTTAGCAAGTTTAATTAGGGTTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025929.1\|WP_103672747.1\|8010_8850_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_046660896.1\|4105_5254_+\|IS4-family-transposase	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672752.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
NZ_CP025929.1\|WP_103672753.1\|18176_19574_-\|ThiF-family-adenylyltransferase	unknown	unknown	gnl\|CDD\|366360
NZ_CP025929.1\|WP_103672754.1\|19694_20177_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373079
NZ_CP025929.1\|WP_103672871.1\|2560_3394_+\|transposase	unknown	unknown	gnl\|CDD\|372577
NZ_CP025929.1\|WP_103672748.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|213662
NZ_CP025929.1\|WP_103672749.1\|10818_11214_-\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
NZ_CP025929.1\|WP_103672872.1\|12124_13351_-\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP025929.1\|WP_103672750.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|274210
NZ_CP025929.1\|WP_103672751.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_CP025929.1\|WP_046660474.1\|6151_7648_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319

Protein	Function_ID	Function_description	E-value
NZ_CP025929.1\|WP_103672871.1\|2560_3394_+\|transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.40929e-32
NZ_CP025929.1\|WP_103672748.1\|8935_10822_-\|CRISPR-associated-protein-Cmr6	gnl\|CDD\|213662	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1791 of Thermotoga maritima, is designated Cmr6 [sic], for CRISPR/Cas Ramp Module protein 6. This family is both closely related to and frequently encoded next to the TM1792 family of Cas proteins described by TIGR01867. The two proteins are fused in an example from Methanopyrus kandleri.	3.7043e-18
NZ_CP025929.1\|WP_103672753.1\|18176_19574_-\|ThiF-family-adenylyltransferase	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	4.54173e-23
NZ_CP025929.1\|WP_103672752.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.10585e-85
NZ_CP025929.1\|WP_103672872.1\|12124_13351_-\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.96166e-37
NZ_CP025929.1\|WP_103672754.1\|19694_20177_-\|hypothetical-protein	gnl\|CDD\|373079	pfam14462, Prok-E2_E, Prokaryotic E2 family E. A member of the E2/UBC superfamily of proteins found in diverse bacteria. Analysis of the active site residues suggest that members of this family are inactive as they lack the characteristic catalytic residues of the E2 enzymes. They are usually fused to or in the neighborhood of a multi/poly ubiquitin domain protein. Other proteins of the ubiquitin modification pathway such as the E1 and JAB proteins are also found in its gene neighborhood along with a distinct predicted metal-binding protein.	0.00146895
NZ_CP025929.1\|WP_103672750.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.8118e-32
NZ_CP025929.1\|WP_103672751.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.05122e-37
NZ_CP025929.1\|WP_046660474.1\|6151_7648_-\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.0941e-34

>NZ_CP025929.1|WP_046660896.1|4105_5254_+|IS4-family-transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>NZ_CP025929.1|WP_103672871.1|2560_3394_+|transposase
MLVYLRHHLSFQILGLMFQVSESTAHNIFTYWQKLFEGELPPSLLEQIKKCQEEEIIIEQLRNYELIVDSAEQPVERPTDYQEQKIYYSGKQRRHTLKSQFIVLPKAEDIVDVVIGQPGPTSDIKICRETLSKFDSQQTFIGDKAYLGENQIRTPDKKPKNGELTENQIKENKVLSSRRIFVEHLIRVVKVFKVVQERFRLNKSRYKSVLLTVCGLVRLRISALILEVIEWEQSGEVIDVIISHSFPSKFVLSLKTLINRFLELILTLGLICLSSLL
>NZ_CP025929.1|WP_046660474.1|6151_7648_-|IS5-family-transposase
MYRKSELPSTPPENFELPFEGKLSQDNRWVIMANLIPWSEFEAEYASLFSEEMGTPAKTFRTALGALIIKEKLGTSDRETVEQIKENPYLQYFLGFSSYSNEPRFEASMLVHFRERITLELINKVNRFMVKNSREIKEEENTEKKLESETQSQPENRGKLILDASCAPADISYPTDLNLLNQGRKQTEKIIDILYETLKGKLVQKPRTYRLLARKSYLEVAKKRKPTVKQRRKALKRQLQYLKRNLDHIEQLLAEGASLQSLKKRDYKLLLVVTEVYRQQLWMYQNNKQSIEDRIVSLTQPHIRPIVRGKAGKPVEFGAKFSASCIDGYIFLDRISWDNFNESGDLKAQIEAYYDYTGYYPESVHVDKIYRTRENRAWCKERGIRISGPPLGRPAKNVSKEQKKQATDDERIRNCIEGKFGQGKRRFSLGKVMAKLPHTSFSAIAITFLVMNLSNLLRQVFWAFLCLKWKNSTFSRSMIRISYNLKINQQLKLMLVAK
>NZ_CP025929.1|WP_103672747.1|8010_8850_+|hypothetical-protein
MSNSSKLSLVLAEVDSVQFFTDAATGRSGISQSGLAALCGVTKQALSKLTKSLSTKCPSIWLKPIQGQVDDLSTRTETGILLYYDQLALAIIKHYAFSGREQAQLVLDKFALIGFNAWVQRMTGWQEPEKPTLNADPTCVLDLLEAHTRRSESLNRTIHTAIHQQINAIKDTLKVLEGRLESSETITIEAVKTTTPQKNEEITKVAVRRLKGEGSGSIHWRTYTKNGRQYRQAFFHYELWEGGDRLIKSCKYIPKEKVAAIQDLQTQKASIVEILRVLS
>NZ_CP025929.1|WP_103672748.1|8935_10822_-|CRISPR-associated-protein-Cmr6
MTAQQEWQKFLEKLQKDKNPLYDLYKDSQLEIGTEITIYFSDEEAKKKASAKWQKLQAKFPPHWKNQKINFKVGQLAPSSITAMTRSTARTNNPTSRKLTSPLQTLNHRLFNNNDTAKPVLIEAAAADKTCQSLYQQLTEKTKRLADETLTVEFIWRLRVGGMRGFQELLLPVFHPVYGVPYIPSSSLKGVVRAWARQHRPEAEVNRLLGTLEDGIGCVQFLDAFPTAPCLTVDIANPQWSWENNRVCYQPVPHYLLSMEEPEILIGFTRTSRGKLEDVSKVKDWLQIALSAGIGSRVSAGYGRTSVASSLSHHSSHAFKLWTQGIYGANPPTKDNQYQGNNEFRPVAVRGTLRYWFRAVGLSIYSPQQCKDLEGRLFGTIEPQAQEGLIRISVDWEEEEGDRNRPYFCEGNILLEAKNQDALNLAEKLLQLSSHLAGIGRGSRRSLHWNNTIGLRGCHWEIDTKKLPRNQELWQQFLREVKDSLLALQSAIGDPANCTPGNPGNRSQDVLNSQAQIYLISCPSLKYPGTVNNWQNEGLGLKVRGKGLDFLYSSGFKGVNQEGNGNANVGGRISQRGETASTPSYVLIKSNFPPQQEPYQTVTIFGVNQRDRATFIQQLNSLNPMQIQ
>NZ_CP025929.1|WP_103672749.1|10818_11214_-|hypothetical-protein
MKLDSRQFSKQAHNALVEIKSELAVTYHKKASGLVQGLSTYISTWGLHRLSGDMQKFLGGTAEDTRYKGKVYQKFLTKLKEFSGADFDVNDQGTLIHMPLRKYTALNHLAIKLAKEWSFWSPAVLGEAEQS
>NZ_CP025929.1|WP_103672750.1|11210_12128_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNTYLTYLYLLTPLHTGGSADEGNLMGIAREVHTEFPYLPASSLRGKIRSALEPSNPQSEEEKALAKEVSQFFGQKIKDGQQPTEGEVWFAEATLLFFPIASLSHHLVWITCPLWLERWNRWLQKSPLTQLIQNCREQITEARPALVSFTPEPLYLQTAILQQNALGQLNTNDSNSISQSLQNLTNANGMINQLLKKLVIVDDEDCIALVETGLQREVRVALNEGEKTVKGGSFRSEEAIPPETVLFFPWGMKPVKQTENTQNIRAKTSELLKNKLQFGGLEGLGRGWCDLKTIETTETTTGSQK
>NZ_CP025929.1|WP_103672872.1|12124_13351_-|CRISPR-associated-protein
MYWYAITPLDVLLFREAKPFSPGESAWAKGLFPPFPSTVFQALRSTLSKDVKDLDFMGPFLLSPQDRLCFSTPKDLVAVKWGLKTQKIDEETEEEEPKEDNLDDTASDWHRTLRLQPVDRTDEAWEHLLFDEAGLAPMVAPFRELVEEENRREFFCRPYPWITAEALSEYLQGKELTDPTQFQEDPWNVQIMPHIQMQADKRQVKDEDGYFTEVAIRLKPGWRLVAGISIDLRETVVRLGGEGHRAIVIPFTLSDADQTLLNPKTNTTGDFAYLLTPGLAVKEEAVYGVYPCDWQSILAGCVSDRPLLWGGVSQIRRKLVISCGKENQERTTSQISLGSSSPNSEAKGDEEFALLPQRAFVPPGTVYIFNQIPSETEALLPKPESTGNWLTSFQKLNYGKLLWGNTPL
>NZ_CP025929.1|WP_103672751.1|13372_16375_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MIMPESESPINSRNFYCRKLCALLEDKSILQQLQSIHPEELQGQIEELPLQIASSSDRVNLGEAQGTNINSVKHPISGQTRNITSQDLRPEIPAEITSETDIEKLFWWFWRFYPELIRQNQNDFFLYPAHSILPDCPLHSYKSTVSALVGAMYPEHWQEGGKSQHLYLFLFTFSPVQEFIKASRKFVDFWAGSYLLHYLSVKLCWYIAETYGSDAVITPSLWSQEIIDALIVKKYPDFAANFASFQDGTSPVGRFDNGISTSLSTAGFPNVIMALVPGKEAARELGEKLKKCLIEEWSEIAKKVREDIKKRTLEFLKDTKNQQKIDEILLKEFLSEQEICKRDLKKWQIGHHGSCWEWNKLWEAQIEKTWETYWTAMPLGNPEQPLTINPTEENYQQWKQAQNAIAPPHLAESLPTTAEQNLYEQINTGTWWGALQARLGQSIQAVKNTRTWAIPTAPGDRSTLSGQFSAVHPQLHYHGQFKNGGGLSARSMRLFWRLMAEVYPGLFNGSEKLNAIELTKRMAWRYGGVAESLGINLGQEDDTNYDNLIRFPNLSSIAAARFTYEDFKKGGQKTRNYWNCLNTLINQQLPNKADTFASRTRGRPYQIPKVDRQINPENRNGQNFNGVMFSSKWLADDMNCNAQETATLRSLVEEAHKKAKFGEGSPADWWVIVLGDGDGMGKYVSGSKLKKYKEYLITDAIAENVKNHQDYPDLLATQKRMGPATHVGLNRALLDFSNRLVPYLTEERYCGKVVYSGGDDVMAVLPLADLLGYLRSLRAAWCADPDPEREFSTEGGYWTPKQTLQGLQQRPYFTMGDGATMSLGIVIAHKSVPLPTVLESLWTAEKDRAKKLYGKDGLCFRVIYGSGNTLEALMKGELLDLWWNFMQYDQQDLSALFYRLAEELPRHACVTESDRLLRKAAQVIINRRDQTLESHIQENLLNWLDQWENWAYQTYNQVNKNKTEKEVPLGTTEKDLANLLRFSAFWNDKRMQQMKWGETE
>NZ_CP025929.1|WP_103672752.1|16679_18098_-|TIGR03985-family-CRISPR-associated-protein
MSLPTITTLEELVPELARLANYPKSDQKQIDNFLNLIQNAVRLWIIEQSFYDFNSDFFVEIDQEWFDCITWIDKLWTKIPNVQNKKLEDLLLGEYPLFYQQKWQEQIIARYQLSSENLQQILSSHIFKVTQRTLRNNFKRLAQLNQPKLIKSASLKGHYKKVVSSSLNSLDNCNLIKHNNDIITENNWLSFLNDGLSTIAELLTTKINGHQRFFIQAEYIVPEALQDKVADWADNLKEFWKQSLISPIKIKYYSASKNITNYYIIYPVSIHYSQRAYYLYAFGETPDQNSSQALQWYGYRLERILSLKQIAWDFSDLTKRLRSQIHKNDKINHLYSPDYIQEQLELAYGFSFYREFNTMLLRFDQNYYQRHVKNTIRHSTFQKIENIQEVKKMIIEQIDSEIDNTKKIQREKLLAKVNCASEDVYYKLCYRVGDHNVIMRLRSWGPNVEVILPSDLRAQIKEYLEKNYKLYQ
>NZ_CP025929.1|WP_103672753.1|18176_19574_-|ThiF-family-adenylyltransferase
MNTQPKPQDILLHISPLMWKQFRQAMLDARQHREEVIGFFFCQRHQLSKKKVRYIPQAWVVPTADCYEHQSASGLVLKQQFHQYLLDTYLCALSKSSSSSKTRKLDVVHIHTHFGDATPSFSCVDDRYEAEYAKFLASCYQEKPRLISGVFNESLEKSKFRIWNRQGTNHTSIEFCRSWLTPINSNFSGEDTELIFARQKVFGETVQKHLNQLKVALIGCGGIGAVFAEQLARLGVKNWVFIDHDRLETVNLNRMPAATQEMVDQGWYKVHYLKWLIKRTYAIGSHVKALSLSVEDEKAKAEIATADLIVVATDNHRSRQVAQELALEYARPLVCLGTHIEVKPHHQPRLYCRVTVPPLGGGWCLMCGNIINLQQAALESAPTEIAAIASEAGYLQGIDAPAVYWLNNICASTGVGVIHGIISGFLPIDSGLDWIYDFPNSNWLKANIDHLQSSDCYFCSSLCTL
>NZ_CP025929.1|WP_103672754.1|19694_20177_-|hypothetical-protein
MTITISSNATKFTLNTRLSAELKLLDKVAKTIVVGSKTIGDVQYTAILIKRMPLSSSKFKVSNSDVLFLLPPDYPRLPPIGCYLNYPWDTVGEGDHHFTRQSYYGAPFLSEEGWYWYCVGLGGGFNRDKWLNSWRPSNNPERGHNLVTLFITARHAINNV

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Crispr_ID: NZ_CP025929_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025929_4

23191-27047

TypeIII

Consensus_repeat	Method
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	PILER-CR

52 spacers

cas1,WYL,cas10,cmr3gr5,cmr4gr7,cas2,RT

The CRISPR arrays of NZ_CP025929_4

>merge|NZ_CP025929|4|23191-27047|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTCTAAACTACGCTTGGCAAGGCTTTTTGAGCACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTGTGCTTTTTTAAGCACAAACAACCAAATTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTTTTGGCGGCGTTGTATCTTCCCATAGAAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGAAGTCGTCTACCCAGAACATGAAACCGAAACATACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGAGGGATACTATTATTTCCACTTTTGGCACTTCGGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAAAAGACTATTCCTGCTATTATGACGCCTACTATGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGAGAACAAAAACAGACAACGGCATTTTTTTCATGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGACCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGAAAAACCATTACTGCCGCTACTGGCAAGAGGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCAACAAAATTCCCTTTGTCGCCCAAGCTGCAGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCGTGACCTCTTGTTCAAGCACTACACATTGAATTGAATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCATCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCGTGCGTACGATTTGCACAACTTAAACTTACCGCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACAGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACTAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGCCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAACTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTCAAAACACTGTACACCTTTCCAAACTTTGGATACCACTTTTAACTTCTTAGCAAGTTTAATTAATGTGAAG

>NZ_CP025929|4|4|23191-24056|PILER-CR
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCTAAACTACGCTTGGCAAGGCTTTTTGAGCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTGTGCTTTTTTAAGCACAAACAACCAAATTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTTTTGGCGGCGTTGTATCTTCCCATAGAAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAGTCGTCTACCCAGAACATGAAACCGAAACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGGGATACTATTATTTCCACTTTTGGCACTTCGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGACTATTCCTGCTATTATGACGCCTACTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGAACAAAAACAGACAACGGCATTTTTTTCATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAAAACCATTACTGCCGCTACTGGCAAGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CAACAAAATTCCCTTTGTCGCCCAAGCTGCAGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGACCTCTTGTTCAAGCACTACACATTGAATTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGCGTACGATTTGCACAACTTAAACTTACCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAA


>NZ_CP025929|4|4|23191-27047|CRISPRCasFinder
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCTAAACTACGCTTGGCAAGGCTTTTTGAGCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGCTTTTTTAAGCACAAACAACCAAATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTTTTGGCGGCGTTGTATCTTCCCATAGAAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAGTCGTCTACCCAGAACATGAAACCGAAACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGGGATACTATTATTTCCACTTTTGGCACTTCGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGACTATTCCTGCTATTATGACGCCTACTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGAACAAAAACAGACAACGGCATTTTTTTCATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAAAACCATTACTGCCGCTACTGGCAAGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CAACAAAATTCCCTTTGTCGCCCAAGCTGCAGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGACCTCTTGTTCAAGCACTACACATTGAATTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGCGTACGATTTGCACAACTTAAACTTACCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCAAAACACTGTACACCTTTCCAAACTTTGGATACCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGTGAAG

>NZ_CP025929|4|4|23191-27047|CRT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCTAAACTACGCTTGGCAAGGCTTTTTGAGCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGCTTTTTTAAGCACAAACAACCAAATTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTTTTTGGCGGCGTTGTATCTTCCCATAGAAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAGTCGTCTACCCAGAACATGAAACCGAAACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGGGATACTATTATTTCCACTTTTGGCACTTCGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGACTATTCCTGCTATTATGACGCCTACTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGAACAAAAACAGACAACGGCATTTTTTTCATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAAAACCATTACTGCCGCTACTGGCAAGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CAACAAAATTCCCTTTGTCGCCCAAGCTGCAGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGACCTCTTGTTCAAGCACTACACATTGAATTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGCGTACGATTTGCACAACTTAAACTTACCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCAAAACACTGTACACCTTTCCAAACTTTGGATACCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGTGAAG

>NZ_CP025929|4|5|24158-26974|PILER-CR
	TTACATTTTGGGCGGGGCGAGTATAATCATCAAACCGCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTCCTCTGGATACAGAGGAGTAAGCCAGCGTAGTCGGCTTCCTTCTGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATTTTGGTTGGTTTTAAAGAGCTCCAGCTCATCCCTTCT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGCCGCCGTCGGGCTGCTCCTTGATGTTAAACACGGGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTCTCCATGTTGTCCATTGTGAAATTTTTTCCCATACAG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTTTCCATTCCCCTTCGGGATCGGGATCGGGATCGGGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GACAGCGAGGTTTTTCCAACTTGAAAAATAAAAAACCC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGGGTTAGAATTTCCTCGACGCCCGGTGACGTGAGGAAATCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTTTTTTTATCATACTTTGATTCTACTACTTGGTATCCAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCGGAGGGCCGGGGGGTTAGGGTTTTACTCTGCTGTATCTTTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCTAAACTACGCTTGGCAAGGCTTTTTGAGCAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACCTGTGCTTTTTTAAGCACAAACAACCAAATTGTCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAACGTTTTTTGGCGGCGTTGTATCTTCCCATAGAAGCTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CACGAGCCCACCAAACGGTGAATCTGTGCAGTGGTTCTTAAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGTTGTATCGCACAGAACTCACTATTCTTTGCTACCGTGCCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GATTGGAGGTTCGCTCCTTTCAATTCTTCCACTAAAACT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAGTCGTCTACCCAGAACATGAAACCGAAACATA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATCCCATCCTTCGCCATCGACCAATCTTTCGATAAAGGCTAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCTCACAAGGGGGTGGAGAAGAGGGGGCGGGGATAAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGCTCCCCTGTACACGAAGGGTTACTTTCCCCGGAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTTATGATTTCTCCTGTTTGTGTTTTGTTTTACTGATAAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGGGATACTATTATTTCCACTTTTGGCACTTCGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACTGTTTTGGATGCCTTCAGTTCCCGTCATGGTGTCGACATAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTTGTCGGGAGCAGTACCCCCAGGGAGCTCTTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CATCCCAGTTGCGGGTAACGGCGCTCTCCTTAAAGGAGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTTTCCAACCAATTTTGCTGATTTTGGGCTGAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCAAGCCGTAAAGTCCAAAATCCAGGACAACAGCCGTCGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTGGGGAGGGTAGAACGCTAACTTGTTGTCGCACAAGAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GCTAAAGTCACCAAGAAAATGAAGGGACTCCTTCTCGTCATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AAAAGACTATTCCTGCTATTATGACGCCTACTATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAGAACAAAAACAGACAACGGCATTTTTTTCATG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CTGTGGAATTGTCCCAGATATCCCCACTTAAGCGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACAACGAAATAGATTCTTTCTATTTCGTCTTTGATAGTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGAGTAAAAGCCACCGCCAACGCTCGATTAATGCGA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TGTCATTTACTGTGAGTTCTGGTCCCGGATAGTTGAC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GAAAAACCATTACTGCCGCTACTGGCAAGAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CCCTGGTAGGCTTTACCCGTGATCCAGGTTTCCAAAATGGAACC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CAACAAAATTCCCTTTGTCGCCCAAGCTGCAGT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GTGAAAAACCGCGAGTTCTAAGGCATCCTTATCTC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGACCTCTTGTTCAAGCACTACACATTGAATTGAAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCAGTAATGGCCGTGTATTCTAGATATTCCTCTAGACCAT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TCGTTTTTTACTACCAAGGCGAACCCTGCGAAGTTTAGCA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	CGTGCGTACGATTTGCACAACTTAAACTTACCGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	AGTAGCAGCAGCAGTTAAACCGATGGTGGTATAGATTT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	GGATACACCGTGGTGCATCCTATGCGTTTCCTACGTGATC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TTCCGCGTATCGCGTTTTGGACACATATAGTCCATTCAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCACACCAACTTCCCCGTCAAGGAAAGCATTTGTGGAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACCGGAAGGGTCAGTGACAGCGTGTGTTTCTCAGG
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	TAAGGTATGGGTGGACTATCAAAAAAATCAATTGAATT
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ACGATACGAGAAGGGATTGGGATGCTGGCAAGGACAGC
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC	ATGGGCCTCCCCATACGGTCAGAATGATGGCGGCTGCAAA
CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025929.1\|WP_103672759.1\|28520_29498_-\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP025929.1\|WP_103672762.1\|31626_32046_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350314
NZ_CP025929.1\|WP_103672873.1\|27411_28416_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP025929.1\|WP_103672761.1\|31414_31630_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672752.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
NZ_CP025929.1\|WP_103672753.1\|18176_19574_-\|ThiF-family-adenylyltransferase	unknown	unknown	gnl\|CDD\|366360
NZ_CP025929.1\|WP_103672757.1\|21075_21648_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350235
NZ_CP025929.1\|WP_103672766.1\|35121_35895_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP025929.1\|WP_103672754.1\|19694_20177_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373079
NZ_CP025929.1\|WP_103672750.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|274210
NZ_CP025929.1\|WP_103672763.1\|32370_32712_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672755.1\|20185_20383_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|316933
NZ_CP025929.1\|WP_103672764.1\|32817_33753_-\|formylglycine-generating-enzyme-family-protein	unknown	unknown	gnl\|CDD\|224182
NZ_CP025929.1\|WP_103672872.1\|12124_13351_-\|CRISPR-associated-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP025929.1\|WP_103672765.1\|34020_34974_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672758.1\|21710_22715_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP025929.1\|WP_103672760.1\|29979_30606_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_002757558.1\|27136_27412_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP025929.1\|WP_158657271.1\|20443_21031_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP025929.1\|WP_103672751.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863

Protein	Function_ID	Function_description	E-value
NZ_CP025929.1\|WP_103672759.1\|28520_29498_-\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	3.73029e-100
NZ_CP025929.1\|WP_103672762.1\|31626_32046_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350314	cd18747, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	6.05277e-68
NZ_CP025929.1\|WP_103672873.1\|27411_28416_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	2.48384e-104
NZ_CP025929.1\|WP_103672766.1\|35121_35895_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	9.14545e-32
NZ_CP025929.1\|WP_103672752.1\|16679_18098_-\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.10585e-85
NZ_CP025929.1\|WP_103672753.1\|18176_19574_-\|ThiF-family-adenylyltransferase	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	4.54173e-23
NZ_CP025929.1\|WP_103672757.1\|21075_21648_-\|NYN-domain-containing-protein	gnl\|CDD\|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.78674e-43
NZ_CP025929.1\|WP_103672754.1\|19694_20177_-\|hypothetical-protein	gnl\|CDD\|373079	pfam14462, Prok-E2_E, Prokaryotic E2 family E. A member of the E2/UBC superfamily of proteins found in diverse bacteria. Analysis of the active site residues suggest that members of this family are inactive as they lack the characteristic catalytic residues of the E2 enzymes. They are usually fused to or in the neighborhood of a multi/poly ubiquitin domain protein. Other proteins of the ubiquitin modification pathway such as the E1 and JAB proteins are also found in its gene neighborhood along with a distinct predicted metal-binding protein.	0.00146895
NZ_CP025929.1\|WP_103672750.1\|11210_12128_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.8118e-32
NZ_CP025929.1\|WP_103672755.1\|20185_20383_-\|hypothetical-protein	gnl\|CDD\|316933	pfam14453, ThiS-like, ThiS-like ubiquitin. A member of the ubiquitin superfamily that is often fused to the ThiF-like (E1)- ubiquitin activating enzyme and is present in gene neighborhoods with components of the thiamine biosynthesis pathway.	0.000284698
NZ_CP025929.1\|WP_103672764.1\|32817_33753_-\|formylglycine-generating-enzyme-family-protein	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	4.42311e-74
NZ_CP025929.1\|WP_103672872.1\|12124_13351_-\|CRISPR-associated-protein	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	1.96166e-37
NZ_CP025929.1\|WP_103672758.1\|21710_22715_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.51886e-114
NZ_CP025929.1\|WP_002757558.1\|27136_27412_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.44077e-26
NZ_CP025929.1\|WP_158657271.1\|20443_21031_-\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00702741
NZ_CP025929.1\|WP_103672751.1\|13372_16375_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	2.05122e-37

>NZ_CP025929.1|WP_103672758.1|21710_22715_-|CRISPR-associated-endonuclease-Cas1
MSTLYIVEQGSSLKVQHQQFQIFQQQQQLFKVPVNQVKNIILFGYCHLSHGAVQAALFHNIPITYYSPQGYYLGNLQSEIQAKITYLTQQVKQAENSDFVNTQANAIVRAKVHNSRILLMRLQRRHPNEIVKTAVINLKKIINSLNSAESLESLRGYEGKAANIYFQGLSSLFQGNFSFTKRTMRPPTDPINSLLSFGYTLLFQHLFSLVQLTGLHTHFGNLHTCRENHPALVLDLMEEFRAQIVDSLVVYLVNKNIFSPDNFTNPDEQGAVYLQQDSLKKFLKYWEEKLSLELTHPQTQRQVSLRSCLELQVQEYISCLMKKTERYQPMIWQK
>NZ_CP025929.1|WP_103672757.1|21075_21648_-|NYN-domain-containing-protein
MTFIRRVLVFADADNTHISAQSFNRKINWQKIRDYLADPQEGRELIEMVIYLGLPPDKERFTEQRKTKEKFIYWAKSNGFLVVTKEGKSKGNDYETNVDVVMAMDAIELALEMKPDIVVLVTGDSDFAYLAQKLRRRGMRVEVASVEQSLGNDLKNSANSVIDLIELFDDFEAQNGTQDYHRIGNNNVFD
>NZ_CP025929.1|WP_158657271.1|20443_21031_-|hypothetical-protein
MKIINGKLFGQPKGDFDPFKQQLEKLNQEVEKVQSSFEQLEQTIEQTENVKREALIRQVELYVQYLKENCENLENLWTQRQENHAKTYQRELKKMELFLKEQKQQLDFLENRKLPQIENKLTALKKQIPTKLLWLTFGSSLMIVIIYFCDWFDIYPFNKHPQKTKSSLVHHELVEENNQLKCQENCFESKTQIDF
>NZ_CP025929.1|WP_103672755.1|20185_20383_-|hypothetical-protein
MRAIVNGKLIDLPEGTTVEDLRSRLPEIGNDDVMEEGFGGTKPLKDTEALKEGSKVWTVPKIVKG
>NZ_CP025929.1|WP_103672754.1|19694_20177_-|hypothetical-protein
MTITISSNATKFTLNTRLSAELKLLDKVAKTIVVGSKTIGDVQYTAILIKRMPLSSSKFKVSNSDVLFLLPPDYPRLPPIGCYLNYPWDTVGEGDHHFTRQSYYGAPFLSEEGWYWYCVGLGGGFNRDKWLNSWRPSNNPERGHNLVTLFITARHAINNV
>NZ_CP025929.1|WP_103672753.1|18176_19574_-|ThiF-family-adenylyltransferase
MNTQPKPQDILLHISPLMWKQFRQAMLDARQHREEVIGFFFCQRHQLSKKKVRYIPQAWVVPTADCYEHQSASGLVLKQQFHQYLLDTYLCALSKSSSSSKTRKLDVVHIHTHFGDATPSFSCVDDRYEAEYAKFLASCYQEKPRLISGVFNESLEKSKFRIWNRQGTNHTSIEFCRSWLTPINSNFSGEDTELIFARQKVFGETVQKHLNQLKVALIGCGGIGAVFAEQLARLGVKNWVFIDHDRLETVNLNRMPAATQEMVDQGWYKVHYLKWLIKRTYAIGSHVKALSLSVEDEKAKAEIATADLIVVATDNHRSRQVAQELALEYARPLVCLGTHIEVKPHHQPRLYCRVTVPPLGGGWCLMCGNIINLQQAALESAPTEIAAIASEAGYLQGIDAPAVYWLNNICASTGVGVIHGIISGFLPIDSGLDWIYDFPNSNWLKANIDHLQSSDCYFCSSLCTL
>NZ_CP025929.1|WP_103672752.1|16679_18098_-|TIGR03985-family-CRISPR-associated-protein
MSLPTITTLEELVPELARLANYPKSDQKQIDNFLNLIQNAVRLWIIEQSFYDFNSDFFVEIDQEWFDCITWIDKLWTKIPNVQNKKLEDLLLGEYPLFYQQKWQEQIIARYQLSSENLQQILSSHIFKVTQRTLRNNFKRLAQLNQPKLIKSASLKGHYKKVVSSSLNSLDNCNLIKHNNDIITENNWLSFLNDGLSTIAELLTTKINGHQRFFIQAEYIVPEALQDKVADWADNLKEFWKQSLISPIKIKYYSASKNITNYYIIYPVSIHYSQRAYYLYAFGETPDQNSSQALQWYGYRLERILSLKQIAWDFSDLTKRLRSQIHKNDKINHLYSPDYIQEQLELAYGFSFYREFNTMLLRFDQNYYQRHVKNTIRHSTFQKIENIQEVKKMIIEQIDSEIDNTKKIQREKLLAKVNCASEDVYYKLCYRVGDHNVIMRLRSWGPNVEVILPSDLRAQIKEYLEKNYKLYQ
>NZ_CP025929.1|WP_103672751.1|13372_16375_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MIMPESESPINSRNFYCRKLCALLEDKSILQQLQSIHPEELQGQIEELPLQIASSSDRVNLGEAQGTNINSVKHPISGQTRNITSQDLRPEIPAEITSETDIEKLFWWFWRFYPELIRQNQNDFFLYPAHSILPDCPLHSYKSTVSALVGAMYPEHWQEGGKSQHLYLFLFTFSPVQEFIKASRKFVDFWAGSYLLHYLSVKLCWYIAETYGSDAVITPSLWSQEIIDALIVKKYPDFAANFASFQDGTSPVGRFDNGISTSLSTAGFPNVIMALVPGKEAARELGEKLKKCLIEEWSEIAKKVREDIKKRTLEFLKDTKNQQKIDEILLKEFLSEQEICKRDLKKWQIGHHGSCWEWNKLWEAQIEKTWETYWTAMPLGNPEQPLTINPTEENYQQWKQAQNAIAPPHLAESLPTTAEQNLYEQINTGTWWGALQARLGQSIQAVKNTRTWAIPTAPGDRSTLSGQFSAVHPQLHYHGQFKNGGGLSARSMRLFWRLMAEVYPGLFNGSEKLNAIELTKRMAWRYGGVAESLGINLGQEDDTNYDNLIRFPNLSSIAAARFTYEDFKKGGQKTRNYWNCLNTLINQQLPNKADTFASRTRGRPYQIPKVDRQINPENRNGQNFNGVMFSSKWLADDMNCNAQETATLRSLVEEAHKKAKFGEGSPADWWVIVLGDGDGMGKYVSGSKLKKYKEYLITDAIAENVKNHQDYPDLLATQKRMGPATHVGLNRALLDFSNRLVPYLTEERYCGKVVYSGGDDVMAVLPLADLLGYLRSLRAAWCADPDPEREFSTEGGYWTPKQTLQGLQQRPYFTMGDGATMSLGIVIAHKSVPLPTVLESLWTAEKDRAKKLYGKDGLCFRVIYGSGNTLEALMKGELLDLWWNFMQYDQQDLSALFYRLAEELPRHACVTESDRLLRKAAQVIINRRDQTLESHIQENLLNWLDQWENWAYQTYNQVNKNKTEKEVPLGTTEKDLANLLRFSAFWNDKRMQQMKWGETE
>NZ_CP025929.1|WP_103672872.1|12124_13351_-|CRISPR-associated-protein
MYWYAITPLDVLLFREAKPFSPGESAWAKGLFPPFPSTVFQALRSTLSKDVKDLDFMGPFLLSPQDRLCFSTPKDLVAVKWGLKTQKIDEETEEEEPKEDNLDDTASDWHRTLRLQPVDRTDEAWEHLLFDEAGLAPMVAPFRELVEEENRREFFCRPYPWITAEALSEYLQGKELTDPTQFQEDPWNVQIMPHIQMQADKRQVKDEDGYFTEVAIRLKPGWRLVAGISIDLRETVVRLGGEGHRAIVIPFTLSDADQTLLNPKTNTTGDFAYLLTPGLAVKEEAVYGVYPCDWQSILAGCVSDRPLLWGGVSQIRRKLVISCGKENQERTTSQISLGSSSPNSEAKGDEEFALLPQRAFVPPGTVYIFNQIPSETEALLPKPESTGNWLTSFQKLNYGKLLWGNTPL
>NZ_CP025929.1|WP_103672750.1|11210_12128_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNTYLTYLYLLTPLHTGGSADEGNLMGIAREVHTEFPYLPASSLRGKIRSALEPSNPQSEEEKALAKEVSQFFGQKIKDGQQPTEGEVWFAEATLLFFPIASLSHHLVWITCPLWLERWNRWLQKSPLTQLIQNCREQITEARPALVSFTPEPLYLQTAILQQNALGQLNTNDSNSISQSLQNLTNANGMINQLLKKLVIVDDEDCIALVETGLQREVRVALNEGEKTVKGGSFRSEEAIPPETVLFFPWGMKPVKQTENTQNIRAKTSELLKNKLQFGGLEGLGRGWCDLKTIETTETTTGSQK
>NZ_CP025929.1|WP_002757558.1|27136_27412_-|CRISPR-associated-endonuclease-Cas2
MLVLIVYDIPDNKRRTKLSNFLEGYGKRVQFSVFECFLSLAEMRELYEKVKKKVKPEEDNVRFYWLSKDATSKTLTIGSKHPEPPPQYYVI
>NZ_CP025929.1|WP_103672873.1|27411_28416_-|CRISPR-associated-endonuclease-Cas1
MATLYLLEQGTSLLKEQFRFLIHVPDKDKIEVPIRDVERILLFGNINLSTPAIATCLESRITVLFLSLSGRYKGHLWSKEASNLNVELLQFQHQNDRQFQLNTSKSIVRGKLINSKQLLLRLNRQRNILDIEQAILGINTDLEALKLVDNIDSLRGYEGISAARYFSALGQLIINPDFNFSQRHRQPPTDPVNALLSFGYTLLFNNVLSLIITEGLSPYLGNFHYGEKKKPYLAFDLMEEFRSPIVDSLMLTLFNQSILKSKDFESLTEKPGIYLTEQGRRLFLNQFEKRMTEKVTHSQISSQISYREAIQLQIRLYKRSLLSSIAYEPFFRAS
>NZ_CP025929.1|WP_103672759.1|28520_29498_-|group-II-intron-reverse-transcriptase/maturase
MITIVNDFLNLSNFQQAWLKVKENNGCAGVDAETIDDFAQNQDFNLVQLREAVANSTYCPHPYKQVKIPKEGGKWRELRIPTVRERIVQQALLNVLAPLVEPHFSPCSFAYRPNLSYIQAVEKVADWRDLGYRWVLDADIVQYFDNIDHQILLVQLRQYIDHPGILCLIKAWISSGILSEQGLNLPKKGIPQGSVISPLLANIYLDKFDHTIANSDIKLVRYADDFLILARTQERIRQAYSEVVDLLDSLKLNINRDKTQITDFEHGFCFLGHGFLENAIFPVDKPKKKQGDRKTQRVGEYLSTGKKKVQTQKSYNQKKKKYLSN
>NZ_CP025929.1|WP_103672760.1|29979_30606_+|hypothetical-protein
MDTKTNKNIAPKIRKLVETARELYQTKYALNVTRLTSLKSLCQEKEAAANFALYLAKLVVKQMESNQTTRSFLGEEAWTEHCQLINHTVEKMEDYLEYPTPDKRQDLHKLLTQLEQIQGWKRHIRFGTQIRVINNKYALIIEDALRCMTSSDYPYWSYQMARDYAERYNSSCGSGLTSESAPLVAEIAEFWCQYYFGKTLTEKFPDKS
>NZ_CP025929.1|WP_103672761.1|31414_31630_+|hypothetical-protein
MLVKGIKKGKTIELLEEVDFPDNEELLVEIREVNDFWSALQDFRQRVDLASIDDDSFDNLRDKSTGRNVRL
>NZ_CP025929.1|WP_103672762.1|31626_32046_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MTLKYLLDTNILSEAKRPHPNQKVMTKLRLSKREIATATLVIHELLFGCFRLPLSKKRQDLEDYVNNVILANLPLFDYDLKSAQYHARERSRLSKFGKSPAFVDGQIASIAFTNNLTLVTNNVDDFQDLEGLVIENWFL
>NZ_CP025929.1|WP_103672763.1|32370_32712_-|hypothetical-protein
MGNSVTVTGEHPRKGQTGEITALPNPYAAIILFDDGNREMLGSDFLSPKTIDVTAKFQVKEGLNYRAGNGCEWYVRVEQATWERLLRYRNRVGTATIDGAIKRMLESIENSPP
>NZ_CP025929.1|WP_103672764.1|32817_33753_-|formylglycine-generating-enzyme-family-protein
MKTLQVKRQSQKFRGYRDYIDGVPLEMVLIPDGIFTMGSPETEEESHADERPQHHVTITSFLMGRYPITQAQWQAIAARTDLKINIDLVEDPSYFKKPYQDQDREIDRWQRPVEQVNWYGAVEFCGRLSKLTGRTYQLPSEAQWEYACRGVTTPLNLKKGEFYPPFHFGETITTDLANYRGEKSYGKGTQGEYREQTTPVGYFQVVNAFGLSDMHGNVWEWCADDWHGNYKGAPTDGSAWLDSNQEKKVKSENEPYSGKNDDISLNGVLRGGSWGSDPTLCRSAIRYDYYRRDSRYDVNGFRVVCVFGRSL
>NZ_CP025929.1|WP_103672765.1|34020_34974_+|hypothetical-protein
MNEIERDFIKKINQLTRKSSFYQRFNERRYSHVKGYIDHDDVIFLIARLLTSYQCYDADIFEMDFTHRTSLIILDRAYQKGFGSYWLSESLFDAFCNSQLPNTVGQLKQVMPCGVLLLPPKLKNPDGQSLKWLCFFHRLADQTIAPIEIMGSRLEIGVAAEDTLSWFTVFDDGTQYGVHRCLKVDENLQLDYQDENEMFIDRDLALTGLNTVVETEKEFTDRVTDLLVQTLLYLQQKSNFSVSSALSPIKNSGKNRKLTPHIIGRDYRIRSQSDPDVPTDRQYRTHWRRGFYRWQPYGPRERPDRKLIWIEPVLVNG
>NZ_CP025929.1|WP_103672766.1|35121_35895_+|ParA-family-protein
MKTIVISSLSGGQGKTTTAFFLGKMLGRTARVLSVDADPQANLTFFSGHEVEPNAPTLLEVIKGTVAATDAIYALNDSRFLIPADDGLSNAQEYLASSGMGALILRTRLKLPADYFDYCIIDSPPARTQISIATIGAADYLLIPAEASTKGVNSLVRTLELSDNLSKLGAFTGTLLGVIPFRDRWFGRSHSKDSAAAIAAMAEVAPGVKIFPSILESERYKQALNQGKLLSEIGHEDMETSFRSVIELLNTKTKEER

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Crispr_ID: NZ_CP025929_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025929_5

60527-60635

TypeV

Consensus_repeat	Method
CCCTGAGAGAAGCCGATACTTCCCCCATTGTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025929_5

>merge|NZ_CP025929|5|60527-60635|CRISPRCasFinder
CCCTGAGAGAAGCCGATACTTCCCCCATTGTCCCCAGAATCGAGAAACACAGCGAGAAAACAAGCGAGAGTGTTGCCCTGAGAGAAGCCGATATTTCCCCCATTGTCCC

>NZ_CP025929|5|5|60527-60635|CRISPRCasFinder
CCCTGAGAGAAGCCGATACTTCCCCCATTGTCCC	CAGAATCGAGAAACACAGCGAGAAAACAAGCGAGAGTGTTG
CCCTGAGAGAAGCCGATATTTCCCCCATTGTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025929.1\|WP_103672782.1\|52606_53539_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379165
NZ_CP025929.1\|WP_103672714.1\|67299_67994_-\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|224576
NZ_CP025929.1\|WP_103672788.1\|65878_67003_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234890
NZ_CP025929.1\|WP_046663018.1\|59123_60218_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NZ_CP025929.1\|WP_103672783.1\|53612_54263_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP025929.1\|WP_103672876.1\|62522_62846_+\|type-II-toxin-antitoxin-system-PrlF-family-antitoxin	unknown	unknown	gnl\|CDD\|236638
NZ_CP025929.1\|WP_103672784.1\|54438_57321_-\|DUF3854-domain-containing-protein	unknown	unknown	gnl\|CDD\|372412
NZ_CP025929.1\|WP_103672785.1\|58078_59131_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NZ_CP025929.1\|WP_071890152.1\|70435_70633_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_158657274.1\|48800_48968_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672789.1\|69818_70433_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672875.1\|62086_62407_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|367035
NZ_CP025929.1\|WP_103672777.1\|44016_47304_-\|helicase	unknown	unknown	gnl\|CDD\|197275
NZ_CP025929.1\|WP_103672877.1\|64575_65853_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP025929.1\|WP_103672781.1\|48972_52347_-\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|369456
NZ_CP025929.1\|WP_103672878.1\|68104_68917_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672778.1\|47329_47938_-\|SLATT-domain-containing-protein	unknown	unknown	gnl\|CDD\|380134
NZ_CP025929.1\|WP_103672787.1\|62980_64477_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|177094
NZ_CP025929.1\|WP_103672779.1\|47915_48797_-\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|375587
NZ_CP025929.1\|WP_149976997.1\|69305_69620_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
NZ_CP025929.1\|WP_103672782.1\|52606_53539_+\|ATP-binding-protein	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	3.43748e-07
NZ_CP025929.1\|WP_103672714.1\|67299_67994_-\|IS1-family-transposase	gnl\|CDD\|224576	COG1662, InsB, Transposase and inactivated derivatives, IS1 family [DNA replication, recombination, and repair].	3.29419e-31
NZ_CP025929.1\|WP_103672788.1\|65878_67003_-\|hypothetical-protein	gnl\|CDD\|234890	PRK01030, PRK01030, tetrahydromethanopterin S-methyltransferase subunit C; Provisional.	0.00744739
NZ_CP025929.1\|WP_046663018.1\|59123_60218_+\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	1.48719e-08
NZ_CP025929.1\|WP_103672783.1\|53612_54263_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	5.42999e-26
NZ_CP025929.1\|WP_103672876.1\|62522_62846_+\|type-II-toxin-antitoxin-system-PrlF-family-antitoxin	gnl\|CDD\|236638	PRK09974, PRK09974, type II toxin-antitoxin system PrlF family antitoxin.	1.71616e-55
NZ_CP025929.1\|WP_103672784.1\|54438_57321_-\|DUF3854-domain-containing-protein	gnl\|CDD\|372412	pfam12965, DUF3854, Domain of unknown function (DUF3854). A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This domain is likely to be related to the Toprim domain.	2.27478e-34
NZ_CP025929.1\|WP_103672785.1\|58078_59131_+\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	9.75664e-22
NZ_CP025929.1\|WP_103672875.1\|62086_62407_+\|TolC-family-protein	gnl\|CDD\|367035	pfam02321, OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.	0.0027023
NZ_CP025929.1\|WP_103672777.1\|44016_47304_-\|helicase	gnl\|CDD\|197275	cd09178, PLDc_N_Snf2_like, N-terminal putative catalytic domain of uncharacterized HKD family nucleases fused to putative helicases from the Snf2-like family. N-terminal putative catalytic domain of uncharacterized archaeal and prokaryotic HKD family nucleases fused to putative helicases from the Snf2-like family, which belong to the DNA/RNA helicase superfamily II (SF2). Although Snf2-like family enzymes do not possess helicase activity, they contain a helicase-like region, where seven helicase-related sequence motifs are found, similar to those in DEAD/DEAH box helicases, which represent the biggest family within the SF2 superfamily. In addition to the helicase-like region, members of this family also contain an N-terminal putative catalytic domain with one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily.	5.57247e-30
NZ_CP025929.1\|WP_103672877.1\|64575_65853_-\|hypothetical-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	1.40849e-38
NZ_CP025929.1\|WP_103672781.1\|48972_52347_-\|N-6-DNA-methylase	gnl\|CDD\|369456	pfam07669, Eco57I, Eco57I restriction-modification methylase. homologs of the Escherichia coli Eco57I restriction-modification methylase are found in several phylogenetically diverse bacteria. The structure of TaqI has been solved.	1.40386e-10
NZ_CP025929.1\|WP_103672778.1\|47329_47938_-\|SLATT-domain-containing-protein	gnl\|CDD\|380134	pfam18186, SLATT_4, SMODS and SLOG-associating 2TM effector domain family 4. The SLATT domain contains two transmembrane helices. SLATT domains are generally predicted to function as pore-forming effectors in a class of conflict systems which are reliant on the production of second messenger nucleotide or nucleotide derivatives. SLATT domains are predicted to initiate cell suicide responses upon their activation. This SLATT family is often coupled to the SMODS nucleotide synthetase and is sometimes further embedded in other conflict systems like CRISPR/Cas or R-M systems.	6.91147e-84
NZ_CP025929.1\|WP_103672787.1\|62980_64477_-\|AAA-family-ATPase	gnl\|CDD\|177094	CHL00195, ycf46, Ycf46; Provisional.	7.11114e-121
NZ_CP025929.1\|WP_103672779.1\|47915_48797_-\|nucleotidyltransferase	gnl\|CDD\|375587	pfam18144, SMODS, Second Messenger Oligonucleotide or Dinucleotide Synthetase domain. Nucleotide synthetase enzyme of the DNA polymerase beta superfamily. Experimental studies have demonstrated cGAMP synthetase activity in the Vibrio cholerae DncV protein, a member of the SMODS family. The diversity inherent to the SMODS family suggests members of the family could generate a range of nucleotides, cyclic and/or linear. The nucleotide second messengers generated by the SMODS domains are predicted to activate effectors in a class of conflict systems reliant on the production and sensing of the nucleotide second messengers.	8.71485e-68
NZ_CP025929.1\|WP_149976997.1\|69305_69620_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.000158716

>NZ_CP025929.1|WP_046663018.1|59123_60218_+|ATP-binding-protein
MFNKQQKPLPTAVLRATNSPSDESSPPSGILLGDNCYWNPGHLPNGHIVAIGASGSGKTQTLKAIAYSLRQTYPDIQLFIIDFHGDQEIIGETCYPLHMASSHGINPLIVNLDAEGGGPHLQAIAVTTTLKRSLQLGPNQEGLLLEILQFCYDRRGISQEQPTSWTREAPNFTDLQQEIESRVESGCKESQKLKLKLIATFTYGVFCRPQPNFTEKHIRIDLSKLPPEIGAIAAESLAWQLMNQHRLTGEIEGKLPRTYLFIDEAKELRKSRACDRIIADGRKYGLGLVLASQSERHLSDDVIGNSSTKIVLPVDQSEVKRVAAKFRFAEKKVAELVPLTALCRFGKQAEVTSIFPYHRRVEDG
>NZ_CP025929.1|WP_103672785.1|58078_59131_+|metal-dependent-hydrolase
MMSVTHIAFSVALTSITLGTANPEILGIAAVAALLPDVDTGKSSIGRLLFPVSSWLEKRTVHRGITHSFFASGVVTLAAYPLALLGYSQLWYGLILGYFFGWFADVFTKSGVQAFYPGRGRMIIPRNPRLRLATGSNAEWFLLFVLVVVSVLSISINSGGGLIRGFNQALGLPSGAIETVNEDASRYLLRVRVQGRNAITEQPVDATYEVIEPLTVSDLLVKDEGGTVYRLGSSQESQIIASRIRVERVAPVQVKIENIVLEDEYLDKLANLTEPFGVAQGNRVYLTGTLTIADGSGLSLPSHADRFDTITLQPGHVAYARLTAASPQYVIDKLGEYSVSGHLIARIINV
>NZ_CP025929.1|WP_103672784.1|54438_57321_-|DUF3854-domain-containing-protein
MFKASRSEIRQEILEGSAIALDVFDTAIEIIPDILIDDVTREVLGTPIADLLGYRYTRFTDQAKPNLLAAVFRQETGEAWQLKIFGDAQDGKKSGQYLAPKGIGDKAYFSPVPDRIARAIAQSHNLTPPGKDETFWEWFLDHPEIPLALTEGGKKALSVVSLNQPAISLYGCQCGTKNKDENGIDKPLFLLPELQLYVKGRRVNIAFDRDLKPSTIKKVESGIYKLAIAIKKAGGHPHVAVWDPKNGKGIDDIHARKGREYALEILDNAIPFDTWEGKNKRDISDITDVTLNQQFLTLEDLKIPENAQIICIKSGKGTGKTEVLRAIAEQASSQGIAVLPIGHRVKLLSELCQRLGIDYRTDKSDTKSYLGYALCFNSLHSQANPPFKPENWHGAYIPLDEIEQSLDYLLNSSLDGLKRYRVAILETFRDLLREAIAGGGKIILCDAYLTKRSITFIQKLLGIPVESWIVQNTYIRETPRSLAVYESKAKMLAALLDHIHKGGRPYINTGSQTAASKTSSKNLQTIISQHCLDRKPVAIDSETTAEPNHKAYRIEDNLKELLQEIDIPIVSPILETGISIDRSDFDSVWCFSSGSQSVDGVCQAIDRVRSDVPRHLFAPKTHANFTGNGSSNARDLLRGEKRKATVIFKELSDLDHISLFEGENAILIATWVDYAITCNSEAWRYRDAIVERLLGEGYQFPAGDNPDDDPTITDEVSLMMTLTREEALETEREMIAAAPNPSDDELEKLSNLSDRTADQRYQLRKGQLCRRYLTENITTTHIKRDSEGWFSELSLHYYLTVGKPFIKHKEQKRMEKLGKNSDGRVFLPDFTKSLIPALLVLEIIRIPEFLDADRMFANEDLQEWYETLVIPYKKDIRTCLGITIGEKDTPIRFLQRVLGKFGLKLSCCGRLGSRLDRRRVYSLAGLNLDGRNEIFSRWLERDNKGVSTESINYVDTSAAA
>NZ_CP025929.1|WP_103672783.1|53612_54263_+|Uma2-family-endonuclease
MTIAINQPIEQKQLSFDEFLARFALSYVEGYGGDNRYELIDGEVFDLEPTGLHEEVAAFITTKVCVQIDKTNLPWFVLQRGLLRPSHLSMTAFRPDVAVVDRDELSKELLWSNQSILTLGSSIKFVAEVVSSNWQNDYARKVEDYAVLGIPEYWIADYAGLGGTRHIGKPKQPTLSICTLVDGEYEIQQFRGNQTITSTIFPGLKLTAEQVLRAGG
>NZ_CP025929.1|WP_103672782.1|52606_53539_+|ATP-binding-protein
MIERHRRRLANGEERVYTYGVGTDGERQSLSIRSVDGSVSIPCYRGAEKERVVAALLANASLLVVGEDGAGKTFLAERVIEDLWGRGFPVAAPAIGTVKQMLLEIAGDLGVDTETLEGKPMTAQQLQETIAEWLQNNIAFLVMDNAHRFPVSLRCWLEKLHLQGQPILLLATYPPARDIFLKLPRIELEALPERAIREIMEGEANDLGLQVTPGKLADWQQRAIGNPMLAKRVVKEEYLGLEGNNYDHTQWIDGTPLLIAVLMCFMILRFLGLGFNNTSLYLIGGILTVAVGMVRLMIYSLPRQSNRLGR
>NZ_CP025929.1|WP_103672781.1|48972_52347_-|N-6-DNA-methylase
MPERLLRLDDLKTLTSPDGVASLFHRLGYDAEAQPLNLEDLQLTSRSAEAVYDAYLIADQGNGGLQVLLFQLQPEEWSSPSVASSRMKAIASQVGRRDTEFLLLATKDYNQLMLVNPRKSFDDKMNLKASIRKLLIDRTNPTAYDLDRLEAIAVRDKSPQELYKVQCEAFDVEKLTKSFYRGYKQLFDKVQQAVKLHNDHPYFEDSDRLHQFSQRLLGRIMFLYFLQKKEFLAGDRRFLTTQYKHLRPDPDDTEYYTSVLEPLFFQTLNQQRPNLDSKWGKIPYLNGGLFDRDYGPGIRDTAGRPTPETIALPNRLFDPGDMDSILGFFNGYNLTIAENVAGDEDVAVDPEMLGKVFENMLAADERGQSGTFYTPRGIVQFMCSEVLSRYLADETGMSLEVLQKLIDYDPDLPDSEFNQLMTPQQTKSLKQAIASIKVLDPAVGSGAFPLGMMQVILNVRQAVARREGMKVSRGSLTISQWKRDIIANNLYGVDIKPEAIEIAKLRMWLSLVVDIPNIEDVEPLPNLDYKLMCGDSLISTIHGEQLIPDPTKTQQAMLAVTPIQIAIAPLLELEKRYFDVQTEERHRLREQILEAEANVFRVAVSDRLSYWKGKQRELEDKIKLLKGKVSRTQEKERKEIADKLTNLAKFASEVESGERSLNFFQYHLHFRNVFESKGGFDVVIGNPPYIKEYEGKQIFDGLRDQDIYQGKMDIWYLFASKGLDILKNNGLLSFIAQNNWVTSSGASKFRNKILRVAQIETLLDFSNYMIFDTVSIQTMIMLFRKSKENNEYEFDYRRLNGDNLSFEDVLCLMEKINNNQTEFLNPIINRNLLINKSLTFTDNKKTDVLTKISNHQNFWFNSKTEIAQGIVLPQDFVNKASKTKLKTSINVGEGIFCLSNQELKRLSVNKKELDLVKPYFTTKELHRYYGNPDNKLWIIYTDSRYKNPIFLKECSNLKKHLDKFQDVITSDNKPYGLHRSREPHFFTGEKIIASRKCPKEPVFTYTEFDCYVSATFYVIKTDRVNQKYLTGLLNSKLITYWLRHKGKMQGNNFQIDKEPLLNIPIYVPDVKEQDKIIKIVNQILTVKRSNSDSDTSELERKIDKIIYQLYDLTEEEIAIVENAV
>NZ_CP025929.1|WP_158657274.1|48800_48968_-|hypothetical-protein
MSTVSEPDRLAIEALVQKCLDAKGVGVLEWEAEIDDRVAHLYGLTDEEMKIIREK
>NZ_CP025929.1|WP_103672779.1|47915_48797_-|nucleotidyltransferase
MSIANQFSQFCENLRVPQATRSSISDRYETITKRLNRDFWESESKTLHSLYVGSYGRRTAVRGFSDLDVLFKLPYEIYKKYNGYQHNGQSALLQAVKQSLKKTYSTTDISGDGQVIVINFSDDISFEIVPCFLKADDSFTYPDSNNGGRWKVTNPIPEIETIKENNELTNKNLIRLCRMARAWRNKWNVPMGGLLIDTLANNFLINWKYKEQSYMFYDWMSRDFFWYLSSQNPQQEHWLAVGSRQYICRKGYFEYKAKQCYNLALEAIEYESKSMNYSATQTWREIYGTDYPN
>NZ_CP025929.1|WP_103672778.1|47329_47938_-|SLATT-domain-containing-protein
MVQTTPINQPDNDDIKILESQIRECFGRVVFTHKTHEKCSDIYAEQLKILKISEIILSALTTTSLLTSIFGDQKIGTIIGAILSTIILGITIYTKDYDLGKLSKSHADVANQLWNIRELYISLIADIKSNNLAVEQIKQKRDELHKSLNIIYSNAPRTNYKAYKLASEALNQNGQINQGEEMTFSDSEIDRFLPNDLRRHKT
>NZ_CP025929.1|WP_103672777.1|44016_47304_-|helicase
MMLIPDYIDNSTHTLETILKQLIEDENQHILDIATGFFRIEAWLRLEQAMNRLTSFRLLIGRDPAIRPAESDRIDLIRYFRRNIQEQLEGEPFKREYKNQIDRVIAYLQQDHVKVRLFGALGEKSQFLHAKAYIFDHYSIVGSSNFTPAGLQGNTELNIINKVKAIASDLRQNWFEKFWNDPSVDLDYKTKLIDALNASKFGSKAYTPYQVFLKALYELFKDEAMVGETERTTLELASFQQEGFERAVKLMEKHRGCIVADAVGLGKTYIGLRVLDYYLIKLRRPGYVPRALVVCPAQLRDLVWIKKLDEFGIKADVLSHEEISRQNFDLRRFSQYDLVVMDEGHNFRNSATNRYRNLLKMVSSGKRNKRVLLLTATPINNSVFDLYHQISLLTRGNDTYYREDGISNLKTYFKALAKGGVEITELLFQTMVRRSRQDVIRRQMAGEEIRINNQLIHFPKRELEQFTYNFEGSFTGLYAGIADRIDQLHLAPYNIKAFKRKKQKQDEDEVKRNDALVALQKALYLKRLESSLIAFKNSVRNQRDFQSKFYEILTQQGKLLSSKNFRKLILAAGMEEEDAEKSMSSIISQLEEIDHKDYQIDNLRAYIEWDLAILNGILTILDKIQQSVVQNQDHDRKLAAFKDLLQTKLKSQRILVFSYFKDTADYLHSELLKDEDWLKDMGNPAIELITGDTPGKQREEKVKRFSPKANTQEDNELETLKQNPIDILICTDVLSEGQNLQDAGVLVNYDLHWNPVRMIQRAGRIDRLGTDYDILYIYNCFPEEGLEALLNLVRRLQDRIATIDREVGLDASVLGETIQERSLEELYRLKQADTEAEKAAILEELEQTADLVSLDEMRLPLLEFIQQKTREAVEEIPLGIHSTRTFKIPDHTFSEGGLFLAFKAGDRHFWQFYPSLRGHISTELSLLVTDKRKIFNWIKCKESDFPPPEDLPPVQFDTAIFRILTTATNNLLESLRRQHTSNKLKPSLSKLIQKIHHALIQPNLLENQPDDQKPKVQILQVINTVNLKIYERDIKTIWDKYVQKQDLNTLIAELDEYFVDNDLYHEIEEKKEENTLKIIREEDIQLVCYEWFKPE
>NZ_CP025929.1|WP_103672875.1|62086_62407_+|TolC-family-protein
MERQRAAKRSQLGEQVLTLVIAYETAGDRERAVLAQLSNHDLLTRITEIDYRLGGSSTETYLTRIAQREQLEIQLNRYRLERETAKRQLLSLTGFSTPETTGETTG
>NZ_CP025929.1|WP_103672876.1|62522_62846_+|type-II-toxin-antitoxin-system-PrlF-family-antitoxin
MALWPESTLTDRYQTTIPDSVRKALGLNKRDKICYNIQPDGKVWISRAEGTEENDPVLGKFLNFLAQDMEQNPQHIQPISSNLVNHVQYLVSGVDLELDAPLLDEDE
>NZ_CP025929.1|WP_103672787.1|62980_64477_-|AAA-family-ATPase
MNNTKNKLISYIDALRPIIYINHFDFSAVDDLIGQVVDQDKIYEYNDAFGAVDFKWKNPKDYSYKQDLLQFLTDFYDIEEENYLILKDVHFHLENPQVIATIKAIALKRSHPEQENFETTIFIVSSKLVIPLELEHLITVFDFPLLSKEEIILIINKFIEDFNAKSIDKKIVEELALSCKGLSEFEINQILYLAYQNDGEINLNDKEVIIKEKEQIIKKSGILEILNFKENIDDIGGLENLKKWLKKKAKIFKDLDKAIEYGVDTPKGIMLVGMPGCGKSLVAKATARLFEVPLLRLDIGKLLGKYVGESEENLRKAIKIAEAVSPCILWIDEIEKAFAGVGEVGGGGDVTTRLFGNFLTWLQEKENTVFVVATANDISKFPPEFLRKGRFDELFSVSFPNEEERKNIFEIHLRKRHKLNNNIDLNILAKKTDKFSGADIEAVVKESVENSFFDDKKIIETNDVMTVITTTQPLSKSFEDKISIIEEYLKTISFKSAS
>NZ_CP025929.1|WP_103672877.1|64575_65853_-|hypothetical-protein
MPRNLKFNLIHNNQIIRTIDELREYCAIEQLLIDYREGKLQRWLQALRCFDDIINEINCLSVENDLELAEKLVRVLEIKRQIFEDYQAKLERANRRRSSVENRHNYSSIFSSLNNFSVLNNFFEQNLLPVTIVTGLHNSETTSLINEMIESRKDLNIFCLHQDLAKLNVAPCPKCGELAYENGKGRKFEFDSIIEEVYKIMEKTERIDHLIVEAVGLIDPLPIALTFLGTELRGMTLLDSIITMVNCANFTSDLFNTQSFQSQLTYSDVIVLNNTNLLNKADSDYLEALIRHMKDSARILRSQEVQVPLPLISSLGWRNIYDISNANECLDSISLFSFESNQAFSIRKFQYFLDNQLESNVFQCIGILWFDESPKKHFFRLSGKRFTLNDDEWNDELKSNSLIFIGIDLDSETLHSQLLACLSSS
>NZ_CP025929.1|WP_103672788.1|65878_67003_-|hypothetical-protein
MTDPLSPQDKERLIKAITEVLTKYDSQVEKQTISDFTTQFIEQRETLKNVNDFLIKVNGSFDAIDSIHEYHKDLINAQNQGKSKLTWLRATIENITTVKDIQKIDEITHEVQSALIKSNNQHLSFLLNESVEIFFSQNGKKKKTNDQRELLGDIQTNSLLTIVSTGQQFESFSQKLNFSPDKDILSIVTNFFEGELGDADESLITKLVAFGVMVADEEIPIEGIHDLDPTGIAVMVDTGFTLAKVGYKLSQGKISVQRAMEYMYERAISDTGVILGAMWKAKTLTAATTIGGTVGFAMAGPPGSVVGGTIGAVVGKMAGKVVNKGIKDGIKTIHHASKSKVSQVIEKTIEVAKQAGQKIKEGSQKVVNFIRNLF
>NZ_CP025929.1|WP_103672714.1|67299_67994_-|IS1-family-transposase
MQCPECKSTHIRKNGINKQGKQNHICVTCGRQFINNYEKQKGYDEKTKRECLTAYVNGMGFRGIERLKGVHHTTVINWVKSVGELLPVAYDPETIPEVGELDELETFVGSKKTKFWVWTAVDHFKKGILGWVIGDHSSETFRPLWELVKSWGCYFYVSDGWSVYPCFIAEGDHIISKTYMTRVEGENTRLRHYLARLHRKTLCYSKSTEMLGYSIRLLIHYLKFQEVPIPY
>NZ_CP025929.1|WP_103672878.1|68104_68917_-|hypothetical-protein
MVDDLTPEEERQRLFWERKVERAFYEAGTALKELRDRRLYRSTHKTFEEYVQDRFGMKQSRSYQLIEATGVVDNLLAKVPPLVELLGDSSDKVPPLVEVLPTNERQVRPLIQLEPEQQREVWQQAVEAAGGKVPSGRIVKDIVQRIRERTKIPIPYRVGDVCEILIKDNPDLRGLGGCWCIVIEVREFSCLVRTWNGEYTVREENLRDLQYSPDHRQKMQRLSDRLVHLRPLGEEETVRAILETLGSLKRPYLNPWEEKLLEFLEGCNAR
>NZ_CP025929.1|WP_149976997.1|69305_69620_+|helix-turn-helix-transcriptional-regulator
MVKQKKAVMIPVEMVEAISWSEEAGLKLKEIREGQGLSRNKLVNKIRDAGRDISPQHIQKLETGFKAITGESQTAKSVGTATLRAILDALDYPLDRFLTEIGHK
>NZ_CP025929.1|WP_103672789.1|69818_70433_+|hypothetical-protein
MQQAASLPDRYRIGKTQFYERRQHLIRLGYDMEAEKHGRNSYYSDEQIKIFDDLNTHYKKWGTLEGFPSVTPEIADNQTKTEKNSPVTNAQTGLVQRESEKVINDSVDAEEIFVDTNPLEDIQEDNFRRVDEAAQFAAAQNLVAFNYLTVNYMKERNFSVPGLTSQVEKSGRVVEESLDSLKQSPELIAKKLIQRTKKEPEQMT
>NZ_CP025929.1|WP_071890152.1|70435_70633_+|hypothetical-protein
MILQGAINRERRRLLHWFLICQITGLLSGGVISISLKGEPLSGAGWGLGIGNLHFGVSVGFLSRK

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Crispr_ID: NZ_CP025929_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025929_6

105417-107122

TypeV-U2,TypeV-U4?

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CRT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	PILER-CR
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CRISPRCasFinder

23 spacers

c2c8_V-U2

The CRISPR arrays of NZ_CP025929_6

>merge|NZ_CP025929|6|105417-107122|CRT,PILER-CR,CRISPRCasFinder
ACATGACAGGTTCGGTAAAGCCAAGCTTAATTGCTTCGCTCAGATCATAAGTAGCAACAATTGACCGGTGAAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCGTGATCCGAGGCTTGAGGGAGCATCTTTTCCCAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCCCGTTATAGGTGACACGGGGATAAGTGATCTTGTTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCGGTTAGGACACGGTAAACCATCGATGATTAATCTAGTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTGGAGACGGGAGCCTCTTTGTCTTTTAACCAAAGGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCATTAAGAGATTTCCCAATCTGAGGAACGACTACAATGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAATTAATAGCCGGGTGACTGGGGCGACTCAGGCGGAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCACTCAATCTCCCCACCCAACGGTCAGACATAGGAAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTTGCTTAATAGTCAAATGAGTTGTTTTCAGGGTTAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCATTTTTTTATATTCCATCCTCTTTTAATCGATAAAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAGATTTCTGGTGAGGATTTCGTGCGATCGACTGCGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCCTGTCCCCCCGATCGCGATCAGAGCATTTATCCCAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAAGGGTTTTCCAGTGGTGAGGAAATAGTGCAAAGATAGCTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTTATTGAATCCTCGCCAAAAGCGAGGCTTTTTCTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTAAAGAGGGAAAATCCGTTCATCTACCAATAGCTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTTTATCAAAACTGAATCAGCCCAATTTCAAATACCGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAAGGATAGTTCTATTATGAAGGATTTGGTGGTTCAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCCCGTGTTCCACAAAACAGGGGAACAAATCGCCAAGAAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAGGACTAAAAAGCCTTTACACGACTACTTACACCAGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCCAGGCCAACAAAAAGCCGAACTCTTTATATTCAAATGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCTTATTAGAAATCAGCACCGGATACCCCAACTTGAGTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCAAGAGTTTTATAGCGTTGCGGCTACGAAACACTTGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTCGAGGCTTTGTAAAAAATTCGATAGTTGGATTTGGGTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC

>NZ_CP025929|6|5|105417-107122|CRT
ACATGACAGGTTCGGTAAAGCCAAGCTTAATTGCTTC	GCTCAGATCATAAGTAGCAACAATTGACCGGTGAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GTGATCCGAGGCTTGAGGGAGCATCTTTTCCCAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTTATAGGTGACACGGGGATAAGTGATCTTGTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GGTTAGGACACGGTAAACCATCGATGATTAATCTAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTGGAGACGGGAGCCTCTTTGTCTTTTAACCAAAG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTAAGAGATTTCCCAATCTGAGGAACGACTACAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AATTAATAGCCGGGTGACTGGGGCGACTCAGGCGGA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ACTCAATCTCCCCACCCAACGGTCAGACATAGGAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTGCTTAATAGTCAAATGAGTTGTTTTCAGGGTTA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTTTTTTATATTCCATCCTCTTTTAATCGATAAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGATTTCTGGTGAGGATTTCGTGCGATCGACTGC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CTGTCCCCCCGATCGCGATCAGAGCATTTATCCCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGGTTTTCCAGTGGTGAGGAAATAGTGCAAAGATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTATTGAATCCTCGCCAAAAGCGAGGCTTTTTCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TAAAGAGGGAAAATCCGTTCATCTACCAATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTTATCAAAACTGAATCAGCCCAATTTCAAATACC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGATAGTTCTATTATGAAGGATTTGGTGGTTCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTGTTCCACAAAACAGGGGAACAAATCGCCAAGAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGGACTAAAAAGCCTTTACACGACTACTTACACCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CAGGCCAACAAAAAGCCGAACTCTTTATATTCAAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTATTAGAAATCAGCACCGGATACCCCAACTTGAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGAGTTTTATAGCGTTGCGGCTACGAAACACTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GAGGCTTTGTAAAAAATTCGATAGTTGGATTTGG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC

>NZ_CP025929|6|6|105490-107122|PILER-CR
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GTGATCCGAGGCTTGAGGGAGCATCTTTTCCCAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTTATAGGTGACACGGGGATAAGTGATCTTGTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GGTTAGGACACGGTAAACCATCGATGATTAATCTAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTGGAGACGGGAGCCTCTTTGTCTTTTAACCAAAG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTAAGAGATTTCCCAATCTGAGGAACGACTACAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AATTAATAGCCGGGTGACTGGGGCGACTCAGGCGGA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ACTCAATCTCCCCACCCAACGGTCAGACATAGGAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTGCTTAATAGTCAAATGAGTTGTTTTCAGGGTTA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTTTTTTATATTCCATCCTCTTTTAATCGATAAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGATTTCTGGTGAGGATTTCGTGCGATCGACTGC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CTGTCCCCCCGATCGCGATCAGAGCATTTATCCCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGGTTTTCCAGTGGTGAGGAAATAGTGCAAAGATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTATTGAATCCTCGCCAAAAGCGAGGCTTTTTCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TAAAGAGGGAAAATCCGTTCATCTACCAATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTTATCAAAACTGAATCAGCCCAATTTCAAATACC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGATAGTTCTATTATGAAGGATTTGGTGGTTCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTGTTCCACAAAACAGGGGAACAAATCGCCAAGAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGGACTAAAAAGCCTTTACACGACTACTTACACCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CAGGCCAACAAAAAGCCGAACTCTTTATATTCAAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTATTAGAAATCAGCACCGGATACCCCAACTTGAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGAGTTTTATAGCGTTGCGGCTACGAAACACTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GAGGCTTTGTAAAAAATTCGATAGTTGGATTTGG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC

>NZ_CP025929|6|6|105490-107122|CRISPRCasFinder
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GTGATCCGAGGCTTGAGGGAGCATCTTTTCCCAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTTATAGGTGACACGGGGATAAGTGATCTTGTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GGTTAGGACACGGTAAACCATCGATGATTAATCTAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTGGAGACGGGAGCCTCTTTGTCTTTTAACCAAAG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTAAGAGATTTCCCAATCTGAGGAACGACTACAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AATTAATAGCCGGGTGACTGGGGCGACTCAGGCGGA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ACTCAATCTCCCCACCCAACGGTCAGACATAGGAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTGCTTAATAGTCAAATGAGTTGTTTTCAGGGTTA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	ATTTTTTTATATTCCATCCTCTTTTAATCGATAAAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGATTTCTGGTGAGGATTTCGTGCGATCGACTGC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CTGTCCCCCCGATCGCGATCAGAGCATTTATCCCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGGTTTTCCAGTGGTGAGGAAATAGTGCAAAGATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTATTGAATCCTCGCCAAAAGCGAGGCTTTTTCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TAAAGAGGGAAAATCCGTTCATCTACCAATAGCT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTTTATCAAAACTGAATCAGCCCAATTTCAAATACC
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGGATAGTTCTATTATGAAGGATTTGGTGGTTCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CCGTGTTCCACAAAACAGGGGAACAAATCGCCAAGAA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AGGACTAAAAAGCCTTTACACGACTACTTACACCA
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	CAGGCCAACAAAAAGCCGAACTCTTTATATTCAAAT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	TTATTAGAAATCAGCACCGGATACCCCAACTTGAGT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	AAGAGTTTTATAGCGTTGCGGCTACGAAACACTT
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC	GAGGCTTTGTAAAAAATTCGATAGTTGGATTTGG
GTTTCAATCCCTAATAAGGCTTAAGCTTAATTGCTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025929.1\|WP_158657286.1\|93853_95191_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350677
NZ_CP025929.1\|WP_158657282.1\|103538_103688_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672829.1\|109432_110119_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672834.1\|112579_113662_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672833.1\|112166_112508_+\|DUF4326-domain-containing-protein	unknown	unknown	gnl\|CDD\|372965
NZ_CP025929.1\|WP_158657281.1\|98867_99677_+\|HTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|128696
NZ_CP025929.1\|WP_103672838.1\|117281_117548_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227837
NZ_CP025929.1\|WP_103672827.1\|104333_105062_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672822.1\|97950_98214_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_046660896.1\|95205_96354_+\|IS4-family-transposase	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672837.1\|116112_116778_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672835.1\|113724_114096_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672830.1\|110124_110316_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672882.1\|115458_115932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672826.1\|103767_104319_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377970
NZ_CP025929.1\|WP_103672821.1\|96334_97954_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350180
NZ_CP025929.1\|WP_103672825.1\|99828_103542_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025929.1\|WP_103672880.1\|98203_98551_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226147
NZ_CP025929.1\|WP_103672836.1\|114649_115000_+\|DUF2493-domain-containing-protein	unknown	unknown	gnl\|CDD\|378473
NZ_CP025929.1\|WP_103672881.1\|107220_109008_-\|transposase	c2c8_V-U2	-	gnl\|CDD\|223747

Protein	Function_ID	Function_description	E-value
NZ_CP025929.1\|WP_103672881.1\|107220_109008_-\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.24249e-25
NZ_CP025929.1\|WP_158657286.1\|93853_95191_+\|hypothetical-protein	gnl\|CDD\|350677	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	9.68883e-20
NZ_CP025929.1\|WP_103672838.1\|117281_117548_+\|hypothetical-protein	gnl\|CDD\|227837	COG5550, COG5550, Predicted aspartyl protease [Posttranslational modification, protein turnover, chaperones].	4.03545e-06
NZ_CP025929.1\|WP_103672833.1\|112166_112508_+\|DUF4326-domain-containing-protein	gnl\|CDD\|372965	pfam14216, DUF4326, Domain of unknown function (DUF4326). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 100 and 162 amino acids in length. There are two completely conserved residues (P and C) that may be functionally important.	2.92051e-22
NZ_CP025929.1\|WP_158657281.1\|98867_99677_+\|HTH-domain-containing-protein	gnl\|CDD\|128696	smart00419, HTH_CRP, helix_turn_helix, cAMP Regulatory protein.	0.00112947
NZ_CP025929.1\|WP_103672826.1\|103767_104319_+\|hypothetical-protein	gnl\|CDD\|377970	pfam08305, NPCBM, NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.).	0.00724106
NZ_CP025929.1\|WP_103672821.1\|96334_97954_+\|hypothetical-protein	gnl\|CDD\|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	2.27075e-33
NZ_CP025929.1\|WP_103672880.1\|98203_98551_-\|hypothetical-protein	gnl\|CDD\|226147	COG3620, COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription].	0.000136199
NZ_CP025929.1\|WP_103672836.1\|114649_115000_+\|DUF2493-domain-containing-protein	gnl\|CDD\|378473	pfam10686, DUF2493, Protein of unknown function (DUF2493). Members of this family are all Proteobacteria. The function is not known.	3.15539e-19

>NZ_CP025929.1|WP_103672827.1|104333_105062_+|hypothetical-protein
MKRRKFIQYSTIGGGSFLLSLGLNNLPPAGAFIWGLIFRALLQAAFSGFQMRDQKWWDERLDVMLAQREFIRQRFTDVSVAEVESPQYNVLVAAQQTQSQSLIIDPKKNKNIPNKINGTITNNVAFACPRIENGEECLATFAGPAAVGMTIAATYLKQNERMSFDDVQASIIPKFQGNVQYSDMRGWSDSTAFRAYPNSYSDNGVRIRYDAIDPRPGGYGIIDVSVDSWHLIQIPKIRVDFV
>NZ_CP025929.1|WP_103672826.1|103767_104319_+|hypothetical-protein
MKLRSIVSSLIAASLVLASTHPVDAQNRRPARVSSLTEMPCQNINGLYLKGINEDIPVGLEIFRAVSRLVYYTLSDGIIPKQAVQIACRLAQVREKPKYKTLTIAFAMSDSNPRSNGSQIRFSVYKDGKPYGYKDVTKGEKLLWQVDVTGVRSLALEVECIRDTNFSNWKDCPPLYFFEDTLK
>NZ_CP025929.1|WP_158657282.1|103538_103688_+|hypothetical-protein
MIAEKIEQIQELDRLGKPISEILEVINSPKARKVLREYKDFMESKKEKN
>NZ_CP025929.1|WP_103672825.1|99828_103542_+|hypothetical-protein
MNKNSWYNSHSFNFRGLTWEFTYIEATASRTIEATKPDGTKIHLKIPIKETTKFAYPLAWLEKWEQSKGKRILLREKAESRTLFEMQLTPSKPPQDGTDKTLLGVNEKKEEVQLTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTEKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNEKKEEVQLTPSKLQQNETEKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNEKKEEVQLTPSKLQQNETEKTLLGVNENKEEVQLTLSKLQQDGTDKTLLGVNEYEPASMEELTPSKLQQDGTDKTLLGVNENKEEVQLTPSKCLSCCFCQRISSILLTCLASPKYFTEKTAKECERFTPIGQAPKIAETLSEAEGNLPKRPRRRRGTGSGTFITTYANHGKYGKKYPQISYQVEFGGRNDRSM
>NZ_CP025929.1|WP_158657281.1|98867_99677_+|HTH-domain-containing-protein
MAANPFDDRFQEFDTSVIAENLDVTRRTVQRTLKKLESLGLIELEIKSFTYRRTKASDTEELDDPRIAKRQQDRLGDSRIALATVGSPQRQQDRHGEPEPLQDKDSEASKTIKTIKTSQTAKDEAGDDIFSEEKLTPSKISQKIIDQLVELDIPINKKIEEAIEKYGECQAIRAINHIKETAATIKSKYAVFLYQISQIQGNSSKELSKEFLEWYQYAKGEITEDIPPKLGNSSKELSKEFLEWYQYAKGEITEDIPQNYCHEIAMVSL
>NZ_CP025929.1|WP_103672880.1|98203_98551_-|hypothetical-protein
MELDPFIRAFVKILKARGIQGKEVAEWTGRTPGNISRIRNGEDSPRLRDFMLILMAIEKRCPGFFDDFCRQLSGQSRRLTISPEEFVNSLDSSEFAALMIATGRRLAKGPASYEC
>NZ_CP025929.1|WP_103672822.1|97950_98214_-|hypothetical-protein
MSANSKTDINFIEEQIKALSPDDRAALLSRLALSTTIVFCGSSVVSFGSAVQINNSQDLNAFIDKIPPEALGEFLKAIGNYIVNHKA
>NZ_CP025929.1|WP_103672821.1|96334_97954_+|hypothetical-protein
MLYLPSSWLVPLPDLAIANSDLETIVARLHKDLDQYFDWTYDIRQYKGCVNLRINCKLLTDIFFHWFGGQKAFSKRIPSECFHWLSEARKLIVEGLIDSDGYNKTVKSLNDSNLETTTIFYTSISQMLLEDIKVLLLTLNIESVIHTRKMVQDARPEFSNCRQGYVLRFCLSRIEPSFAERQTHKLGLNVQNAQLLKVLQVITEKPTKELVYDFAVEGTENFVASGVVCHNTGTPIKNGRPINLFPLLQITQHPLAADSWEFQKYYCNAHHKSIGTKSIWDNTGAAHLDELSKKTEDIILRRKKAECLDLPPKLRSLTPILLEGEAGKNYRQEIDRHISEYREREKRGEVKEGAEALVTINALRKVGSLYKVPAAIEYTAELLEQGQAVVIFTEYLESAKALYTALSQIAPSELLTGETKQEDRQAIVDRFQAGTSKIFIGTIKAGGVRLTLTAANQVILVDRPWTPGDADQAEDRCYRIGQNNTVNAYWIQLGAIDEAIDTLLAEKRDRIELVLKGKRKTLRGLSKPAELAKELLEIL
>NZ_CP025929.1|WP_046660896.1|95205_96354_+|IS4-family-transposase
MISELYQKVLENELGRARYLLLLMIVGTLQILKQAKLEILAEALPIPILFESRRKKLKRFLKLEILNIEKIWFLCLKEMLKQQQRFTTKGLAYIAIDRTSWGAINILMVSLIYDKRAIPIYWEILDKKGSSNLEEQQRVLEKTLTVLSGHKIVVLGDREFCSVSLGKWLQKQSLYFCLRQKKSTNVKTKEGIYQEMRELGLSPGTQLFLNDVNITKEQGFGQFNLAGKWKKTYGGFQTKEPWYILTNFVDLETAIIAYQKRFDIEEMFRDFKSGGYSLEGSQLAPQYLSKLIIVIAIAYTSATLQGKKIKDMGIQKYVTRPEKRYKGQRRHSSFYVGQHLYHWLQLHQMFQKNIEELMQISRYRLKDYIKGQRAISLALSTF
>NZ_CP025929.1|WP_158657286.1|93853_95191_+|hypothetical-protein
MIEGERAAELAEREKEAETAANDILNLVAAAELDRPLAGIGHLFSHQKEAVKWLLAHRTGGIYRGGILADDMGLGKTLSALVAARAMAKIHGCPIFVICPASLKDNWLREAAKAGAAIEVFSWGKIPPPLESQNYLAIADEAQWAQNKNTARTKKLLELAHHENCLGSWLLSVAGETPVVIKDNDRTQARIQVMTIAKAAESMGLEGEGTKILQHHERFFVRSFNQDKKCMEWARIYGVQAHYSHEPLIIIKAQGKTSIRITKGHSLYVFREGKIIQPQAENIKPGDYLIKDANISIDCEISEIDLVEYISLYDSAFQCYVIYGDFDSAILMQKSLGNINSDTSYNWLNNGKHGCYMTYQKWNEAGQPGNYCWIAGRNGSKGRGAIPIVPVQALAWLVGYTSGDGWATKNRLYLATDRGTSKLKSLCSIKYRHRLQKKISHIYHI
>NZ_CP025929.1|WP_103672881.1|107220_109008_-|transposase
MVKKPPKEKEDKPKKVIEFKIHPNKEQVEEINRSFASCKLLWNLSIALKEESKQRYYRKNYKFDEFSPEIWELSYSGHYDEEKFKSLKDKEKELLIKNPCCKIAYFKKTSDGKEYTPLNAIPIRRFMNAEDIDKDAVNYLNRQKLAFYFREDTAKFIGEIETEFKKGFFKSVIKTAYDAAKKGIRGIPKFKGRRDKVETLVNGQPDTIKIKSNGVIVSSKIGLLKVRGLDRLQGKAPRMAKITRKATGYYLQLTVETDDTIYKESDKCVGLDMGAVAIFTDDLGRQSEAKRYAKIQKKRLNRLQRQASRQKDNSNNQRKTYAKLARVHEKIARQRKGRNAQLAHKITSEYQSVILEDLKLKNMTAAAKPKEREDGDGYKQNGKKRKSGLNKALLDNAIGQLRTFIENKANERGRKIIRVNPKHTSQTCPNCGNIDKANRVSQSKFKCVSCGYEAHADQNAAANILIRGLQDEFLRAIGSLIKFPVSLIGKYPGLEGKFTPDLDANQESIGDAPIENAEHSISKQMKQEGNRTPTQSENGSQSLIFSSAPPQPCGDSHGKNKPKALPDKASKRSSKKPRGAIPENPDQLTIWDLLD
>NZ_CP025929.1|WP_103672829.1|109432_110119_+|hypothetical-protein
MSKVISFSISDRYLDKLRSLYPDLTDNLAAKQFLTDQLDADLDDSLDTNLDDKLKILIEKSLEDRLDATEKSISKWILDFDNRIKDIDREVKDRSIAVDDQIEKIKNRLDNWTLATSSDIKDVKDRSIAIDHQIKAIEARLDESLDKNLDDSLDESLDSSLYEGYSEIFIDRLDDNLDDSLDNELNDRLDDTLDDSPDKSLDDATIDKKQGQSIEPAIEPDGQPFDLA
>NZ_CP025929.1|WP_103672830.1|110124_110316_+|hypothetical-protein
MANLEGNTKPAPERLAKIDRRLAKKGDQRGMAKARSRKQEGIPDSLKKEHRGAPYGPGCPGLR
>NZ_CP025929.1|WP_103672833.1|112166_112508_+|DUF4326-domain-containing-protein
MFEVINGKNSGFLGNSKIYIGRANKSYLLKGSVLQNRFVIGRDGNREEVVAKYRQWLWQEVQKRGEVFDELVRIAERVKKGETVQLACWCKPLKCHGDVVKSCVEWMIKEGIV
>NZ_CP025929.1|WP_103672834.1|112579_113662_+|hypothetical-protein
MTFINPKELGLYAPKTNERVKLAAEAQKFINQALYDYKQLFYGLRLIAWYERDKRAIFYEALTKGELDQFKVAPGHRASDGSYTKDEWDYDRLNAYMWNRFRERFDAAFDLEKIAELKTLKDIKQATDELLEFALTNWKSAILGDDKHQDEPRVEPIGKGVTSCKLEYEGIMIEGSFRSEERILTLRTQGLPEVIIRQVRGETSWKGDIHFDPFGQVVVMNSKKAELFSQVLALAARLNLGIKEFMDDPEGFLGIESPKSRQHARQRVKQRLLEINQNHYERRKAEAGSRPVTRPLNDDIDATPDSDEPTLKEPRKSPNTPIKSGKRKTDRKREAEEWLKNNPEFSEDVDAQMGITSIHT
>NZ_CP025929.1|WP_103672835.1|113724_114096_+|hypothetical-protein
MRTAIFFWQDAEQIPILKSLIQEALHLGYTRFLTAIFLENDRGLVFSIEAESIDDFPLDNLFRADRVLLVDDPLLWLSDRGERVFAVWDGSEGETLTCLGFLKAWGLPGNYVNPYRTFTIETI
>NZ_CP025929.1|WP_103672836.1|114649_115000_+|DUF2493-domain-containing-protein
MLKIIIAGSRNFNDYNLLEQKVNFYIGENQDIEIISGTARGADKLGERYAINKGLKLKRFPANWQKYGKKAGYLRNEEMAKYASHAIIFWNGKSKGTGHMIELCKKYNINYRIIRF
>NZ_CP025929.1|WP_103672882.1|115458_115932_+|hypothetical-protein
MNQPISPTPTIQTSNILHEYADIRWQMAALSAKLEEIEPMAIERALSIISEDATANGKRVVYRTDTVNIILQLRSQKPQPENHADLESLKELIELEAEKAQHQNQEEIALMEREIALLRSRLLRLQQTDEGRTYQAEYADLERQLTTLKPLLSVRLK
>NZ_CP025929.1|WP_103672837.1|116112_116778_+|hypothetical-protein
MTFKVFGSRPANSICLPDVPYSVRFNCKDGGGGIFVGGSDPQHRKSNPEDKIDINIIKVSKYFGTLGKTDNVLWIQLFFIPAPNVPAEILPPNTVCVGYIKKQSISALFNTVQAAMNNGEPAFGIFTLSFQKEVGAEGPYYSVCFNWRTRQSDEEKKQLEMIEGFLKEYGEQLIDLESTRLLTCVDGWSAGDVNALIARSLGELPESNRPELPPAKSPRRR
>NZ_CP025929.1|WP_103672838.1|117281_117548_+|hypothetical-protein
MARNILSTPIEKPLITGEGENLSVDAMLDTGFTEFLAINKQDVEALNWAYFDQEEMLTVRGLANFNIYLNNGSQWLKEFDLMVRYRQE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP025929_1	1.1\|622\|37\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	622-658	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	622-658	0	1.0
NZ_CP025929_1	1.2\|694\|42\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	694-735	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	694-735	0	1.0
NZ_CP025929_1	1.3\|771\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	771-808	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	771-808	0	1.0
NZ_CP025929_1	1.4\|844\|35\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	844-878	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	844-878	0	1.0
NZ_CP025929_1	1.5\|914\|34\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	914-947	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	914-947	0	1.0
NZ_CP025929_1	1.6\|983\|41\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	983-1023	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	983-1023	0	1.0
NZ_CP025929_1	1.7\|1059\|41\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1059-1099	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1059-1099	0	1.0
NZ_CP025929_1	1.8\|1135\|46\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1135-1180	46	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1135-1180	0	1.0
NZ_CP025929_1	1.9\|1216\|39\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1216-1254	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1216-1254	0	1.0
NZ_CP025929_1	1.10\|1290\|37\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1290-1326	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1290-1326	0	1.0
NZ_CP025929_1	1.11\|1362\|33\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1362-1394	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1362-1394	0	1.0
NZ_CP025929_1	1.12\|1430\|41\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1430-1470	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1430-1470	0	1.0
NZ_CP025929_1	1.13\|1506\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1506-1543	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1506-1543	0	1.0
NZ_CP025929_1	1.14\|1579\|40\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1579-1618	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1579-1618	0	1.0
NZ_CP025929_1	1.15\|1654\|35\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1654-1688	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1654-1688	0	1.0
NZ_CP025929_1	1.16\|1724\|47\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1724-1770	47	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1724-1770	0	1.0
NZ_CP025929_1	1.17\|1806\|34\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1806-1839	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1806-1839	0	1.0
NZ_CP025929_1	1.18\|1875\|39\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1875-1913	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1875-1913	0	1.0
NZ_CP025929_1	1.19\|1949\|37\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	1949-1985	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	1949-1985	0	1.0
NZ_CP025929_1	1.20\|2021\|36\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	2021-2056	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	2021-2056	0	1.0
NZ_CP025929_1	1.21\|2092\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	2092-2129	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	2092-2129	0	1.0
NZ_CP025929_1	1.22\|2165\|33\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	2165-2197	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	2165-2197	0	1.0
NZ_CP025929_2	2.1\|3456\|40\|NZ_CP025929\|CRISPRCasFinder,CRT	3456-3495	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3456-3495	0	1.0
NZ_CP025929_2	2.2\|3531\|36\|NZ_CP025929\|CRISPRCasFinder,CRT	3531-3566	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3531-3566	0	1.0
NZ_CP025929_2	2.3\|3602\|42\|NZ_CP025929\|CRISPRCasFinder,CRT	3602-3643	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3602-3643	0	1.0
NZ_CP025929_2	2.4\|3679\|33\|NZ_CP025929\|CRISPRCasFinder,CRT	3679-3711	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3679-3711	0	1.0
NZ_CP025929_2	2.5\|3747\|38\|NZ_CP025929\|CRISPRCasFinder,CRT	3747-3784	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3747-3784	0	1.0
NZ_CP025929_2	2.6\|3820\|41\|NZ_CP025929\|CRISPRCasFinder,CRT	3820-3860	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3820-3860	0	1.0
NZ_CP025929_2	2.7\|3896\|34\|NZ_CP025929\|CRISPRCasFinder,CRT	3896-3929	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3896-3929	0	1.0
NZ_CP025929_2	2.8\|3456\|41\|NZ_CP025929\|PILER-CR	3456-3496	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3456-3496	0	1.0
NZ_CP025929_2	2.9\|3531\|37\|NZ_CP025929\|PILER-CR	3531-3567	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3531-3567	0	1.0
NZ_CP025929_2	2.10\|3602\|43\|NZ_CP025929\|PILER-CR	3602-3644	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3602-3644	0	1.0
NZ_CP025929_2	2.11\|3679\|34\|NZ_CP025929\|PILER-CR	3679-3712	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3679-3712	0	1.0
NZ_CP025929_2	2.12\|3747\|39\|NZ_CP025929\|PILER-CR	3747-3785	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3747-3785	0	1.0
NZ_CP025929_2	2.13\|3820\|42\|NZ_CP025929\|PILER-CR	3820-3861	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3820-3861	0	1.0
NZ_CP025929_2	2.14\|3896\|35\|NZ_CP025929\|PILER-CR	3896-3930	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	3896-3930	0	1.0
NZ_CP025929_3	3.1\|5320\|48\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5320-5367	48	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5320-5367	0	1.0
NZ_CP025929_3	3.2\|5403\|35\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5403-5437	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5403-5437	0	1.0
NZ_CP025929_3	3.3\|5473\|36\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5473-5508	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5473-5508	0	1.0
NZ_CP025929_3	3.4\|5544\|33\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5544-5576	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5544-5576	0	1.0
NZ_CP025929_3	3.5\|5612\|36\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5612-5647	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5612-5647	0	1.0
NZ_CP025929_3	3.6\|5683\|36\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5683-5718	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5683-5718	0	1.0
NZ_CP025929_3	3.7\|5754\|37\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5754-5790	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5754-5790	0	1.0
NZ_CP025929_3	3.8\|5826\|37\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5826-5862	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5826-5862	0	1.0
NZ_CP025929_3	3.9\|5898\|34\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5898-5931	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5898-5931	0	1.0
NZ_CP025929_3	3.10\|5967\|31\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5967-5997	31	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5967-5997	0	1.0
NZ_CP025929_3	3.11\|6033\|42\|NZ_CP025929\|CRISPRCasFinder,CRT	6033-6074	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	6033-6074	0	1.0
NZ_CP025929_4	4.1\|23226\|39\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23226-23264	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23226-23264	0	1.0
NZ_CP025929_4	4.2\|23300\|49\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23300-23348	49	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23300-23348	0	1.0
NZ_CP025929_4	4.3\|23384\|40\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23384-23423	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23384-23423	0	1.0
NZ_CP025929_4	4.4\|23459\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23459-23496	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23459-23496	0	1.0
NZ_CP025929_4	4.5\|23532\|39\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23532-23570	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23532-23570	0	1.0
NZ_CP025929_4	4.6\|23606\|41\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23606-23646	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23606-23646	0	1.0
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23682-23719	0	1.0
NZ_CP025929_4	4.8\|23755\|43\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23755-23797	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23755-23797	0	1.0
NZ_CP025929_4	4.9\|23833\|42\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23833-23874	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23833-23874	0	1.0
NZ_CP025929_4	4.10\|23910\|43\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23910-23952	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23910-23952	0	1.0
NZ_CP025929_4	4.11\|23988\|34\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23988-24021	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	23988-24021	0	1.0
NZ_CP025929_4	4.12\|24057\|33\|NZ_CP025929\|CRISPRCasFinder,CRT	24057-24089	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24057-24089	0	1.0
NZ_CP025929_4	4.13\|24125\|33\|NZ_CP025929\|CRISPRCasFinder,CRT	24125-24157	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24125-24157	0	1.0
NZ_CP025929_4	4.14\|24193\|43\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24193-24235	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24193-24235	0	1.0
NZ_CP025929_4	4.15\|24271\|43\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24271-24313	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24271-24313	0	1.0
NZ_CP025929_4	4.16\|24349\|39\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24349-24387	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24349-24387	0	1.0
NZ_CP025929_4	4.17\|24423\|35\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24423-24457	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24423-24457	0	1.0
NZ_CP025929_4	4.18\|24493\|42\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24493-24534	42	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24493-24534	0	1.0
NZ_CP025929_4	4.19\|24570\|38\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24570-24607	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24570-24607	0	1.0
NZ_CP025929_4	4.20\|24643\|39\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24643-24681	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24643-24681	0	1.0
NZ_CP025929_4	4.21\|24717\|40\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24717-24756	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24717-24756	0	1.0
NZ_CP025929_4	4.22\|24792\|35\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24792-24826	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24792-24826	0	1.0
NZ_CP025929_4	4.23\|24862\|43\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24862-24904	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24862-24904	0	1.0
NZ_CP025929_4	4.24\|24940\|35\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	24940-24974	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	24940-24974	0	1.0
NZ_CP025929_4	4.25\|25010\|39\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25010-25048	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25010-25048	0	1.0
NZ_CP025929_4	4.26\|25084\|36\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25084-25119	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25084-25119	0	1.0
NZ_CP025929_4	4.27\|25155\|40\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25155-25194	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25155-25194	0	1.0
NZ_CP025929_4	4.28\|25230\|40\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25230-25269	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25230-25269	0	1.0
NZ_CP025929_4	4.29\|25305\|43\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25305-25347	43	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25305-25347	0	1.0
NZ_CP025929_4	4.30\|25383\|35\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25383-25417	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25383-25417	0	1.0
NZ_CP025929_4	4.31\|25453\|34\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25453-25486	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25453-25486	0	1.0
NZ_CP025929_4	4.32\|25522\|37\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25522-25558	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25522-25558	0	1.0
NZ_CP025929_4	4.33\|25594\|39\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25594-25632	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25594-25632	0	1.0
NZ_CP025929_4	4.34\|25668\|36\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25668-25703	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25668-25703	0	1.0
NZ_CP025929_4	4.35\|25739\|37\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25739-25775	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25739-25775	0	1.0
NZ_CP025929_4	4.36\|25811\|32\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25811-25842	0	1.0
NZ_CP025929_4	4.37\|25878\|44\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25878-25921	44	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25878-25921	0	1.0
NZ_CP025929_4	4.38\|25957\|33\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25957-25989	33	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	25957-25989	0	1.0
NZ_CP025929_4	4.39\|26025\|35\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26025-26059	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26025-26059	0	1.0
NZ_CP025929_4	4.40\|26095\|38\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26095-26132	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26095-26132	0	1.0
NZ_CP025929_4	4.41\|26168\|40\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26168-26207	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26168-26207	0	1.0
NZ_CP025929_4	4.42\|26243\|40\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26243-26282	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26243-26282	0	1.0
NZ_CP025929_4	4.43\|26318\|34\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26318-26351	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26318-26351	0	1.0
NZ_CP025929_4	4.44\|26387\|38\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26387-26424	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26387-26424	0	1.0
NZ_CP025929_4	4.45\|26460\|40\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26460-26499	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26460-26499	0	1.0
NZ_CP025929_4	4.46\|26535\|39\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26535-26573	39	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26535-26573	0	1.0
NZ_CP025929_4	4.47\|26609\|40\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26609-26648	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26609-26648	0	1.0
NZ_CP025929_4	4.48\|26684\|35\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26684-26718	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26684-26718	0	1.0
NZ_CP025929_4	4.49\|26754\|38\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26754-26791	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26754-26791	0	1.0
NZ_CP025929_4	4.50\|26827\|38\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26827-26864	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26827-26864	0	1.0
NZ_CP025929_4	4.51\|26900\|40\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	26900-26939	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26900-26939	0	1.0
NZ_CP025929_4	4.52\|26975\|38\|NZ_CP025929\|CRISPRCasFinder,CRT	26975-27012	38	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	26975-27012	0	1.0
NZ_CP025929_5	5.1\|60561\|41\|NZ_CP025929\|CRISPRCasFinder	60561-60601	41	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	60561-60601	0	1.0
NZ_CP025929_6	6.1\|105454\|36\|NZ_CP025929\|CRT	105454-105489	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105454-105489	0	1.0
NZ_CP025929_6	6.2\|105527\|34\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	105527-105560	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105527-105560	0	1.0
NZ_CP025929_6	6.3\|105598\|35\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	105598-105632	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105598-105632	0	1.0
NZ_CP025929_6	6.4\|105670\|37\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	105670-105706	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105670-105706	0	1.0
NZ_CP025929_6	6.5\|105744\|35\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	105744-105778	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105744-105778	0	1.0
NZ_CP025929_6	6.6\|105816\|36\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	105816-105851	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105816-105851	0	1.0
NZ_CP025929_6	6.7\|105889\|36\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	105889-105924	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105889-105924	0	1.0
NZ_CP025929_6	6.8\|105962\|36\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	105962-105997	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	105962-105997	0	1.0
NZ_CP025929_6	6.9\|106035\|36\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106035-106070	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106035-106070	0	1.0
NZ_CP025929_6	6.10\|106108\|36\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106108-106143	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106108-106143	0	1.0
NZ_CP025929_6	6.11\|106181\|34\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106181-106214	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106181-106214	0	1.0
NZ_CP025929_6	6.12\|106252\|35\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106252-106286	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106252-106286	0	1.0
NZ_CP025929_6	6.13\|106324\|40\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106324-106363	40	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106324-106363	0	1.0
NZ_CP025929_6	6.14\|106401\|35\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106401-106435	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106401-106435	0	1.0
NZ_CP025929_6	6.15\|106473\|34\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106473-106506	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106473-106506	0	1.0
NZ_CP025929_6	6.16\|106544\|36\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106544-106579	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106544-106579	0	1.0
NZ_CP025929_6	6.17\|106617\|35\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106617-106651	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106617-106651	0	1.0
NZ_CP025929_6	6.18\|106689\|37\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106689-106725	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106689-106725	0	1.0
NZ_CP025929_6	6.19\|106763\|35\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106763-106797	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106763-106797	0	1.0
NZ_CP025929_6	6.20\|106835\|36\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106835-106870	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106835-106870	0	1.0
NZ_CP025929_6	6.21\|106908\|36\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106908-106943	36	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106908-106943	0	1.0
NZ_CP025929_6	6.22\|106981\|34\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106981-107014	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	106981-107014	0	1.0
NZ_CP025929_6	6.23\|107052\|34\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	107052-107085	34	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	107052-107085	0	1.0
NZ_CP025929_6	6.23\|107052\|34\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	107052-107085	34	LC425525	Uncultured phage DNA, contig: NODE869	4554-4587	2	0.941
NZ_CP025929_6	6.22\|106981\|34\|NZ_CP025929\|CRT,PILER-CR,CRISPRCasFinder	106981-107014	34	LC425515	Uncultured phage DNA, contig: NODE375	16834-16867	3	0.912
NZ_CP025929_4	4.38\|25957\|33\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25957-25989	33	AP017628	Pleomorphomonas sp. SM30 plasmid pSM30-2 DNA, complete genome	10790-10822	9	0.727
NZ_CP025929_1	1.4\|844\|35\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	844-878	35	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	5746-5780	10	0.714
NZ_CP025929_4	4.31\|25453\|34\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25453-25486	34	NZ_CP042265	Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence	511140-511173	10	0.706
NZ_CP025929_4	4.31\|25453\|34\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25453-25486	34	NZ_CP021133	Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence	46700-46733	10	0.706
NZ_CP025929_4	4.36\|25811\|32\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	MK448865	Streptococcus phage Javan182, complete genome	14122-14153	10	0.688
NZ_CP025929_3	3.7\|5754\|37\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	5754-5790	37	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	852-888	11	0.703
NZ_CP025929_4	4.36\|25811\|32\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	MK448701	Streptococcus phage Javan197, complete genome	16212-16243	11	0.656
NZ_CP025929_4	4.36\|25811\|32\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	MK448869	Streptococcus phage Javan190, complete genome	16213-16244	11	0.656
NZ_CP025929_4	4.36\|25811\|32\|NZ_CP025929\|CRISPRCasFinder,CRT,PILER-CR	25811-25842	32	MK448870	Streptococcus phage Javan192, complete genome	16213-16244	11	0.656
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448946	Streptococcus phage Javan456, complete genome	14724-14761	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448871	Streptococcus phage Javan196, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448976	Streptococcus phage Javan528, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448961	Streptococcus phage Javan494, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448697	Streptococcus phage Javan185, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448693	Streptococcus phage Javan177, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448766	Streptococcus phage Javan465, complete genome	12784-12821	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448696	Streptococcus phage Javan183, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448868	Streptococcus phage Javan188, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448866	Streptococcus phage Javan184, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448699	Streptococcus phage Javan189, complete genome	11817-11854	12	0.684
NZ_CP025929_4	4.7\|23682\|38\|NZ_CP025929\|PILER-CR,CRISPRCasFinder,CRT	23682-23719	38	MK448867	Streptococcus phage Javan186, complete genome	11817-11854	12	0.684

1. spacer 1.1|622|37|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttttttgcggtatttttggttactttgtatcattgt	CRISPR spacer
cttttttgcggtatttttggttactttgtatcattgt	Protospacer
*************************************

2. spacer 1.2|694|42|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agatcctttaggagaatttaactctaacgcttgggccgcctc	CRISPR spacer
agatcctttaggagaatttaactctaacgcttgggccgcctc	Protospacer
******************************************

3. spacer 1.3|771|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaagagtaaccgctgtttttgcttgcgttccgaataa	CRISPR spacer
aaaagagtaaccgctgtttttgcttgcgttccgaataa	Protospacer
**************************************

4. spacer 1.4|844|35|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gactagttgttctggggcccaaaaagccttgggga	CRISPR spacer
gactagttgttctggggcccaaaaagccttgggga	Protospacer
***********************************

5. spacer 1.5|914|34|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aatgcaaccgcggcacccaggacttttgtgccat	CRISPR spacer
aatgcaaccgcggcacccaggacttttgtgccat	Protospacer
**********************************

6. spacer 1.6|983|41|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttaaagggggggggtgttagtcccctacgatgcataccc	CRISPR spacer
ttttaaagggggggggtgttagtcccctacgatgcataccc	Protospacer
*****************************************

7. spacer 1.7|1059|41|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaccatcgctttgccacaccaaacaaatctttcgattatg	CRISPR spacer
aaaccatcgctttgccacaccaaacaaatctttcgattatg	Protospacer
*****************************************

8. spacer 1.8|1135|46|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtatgtacacgcccttgagtgcttgctcgtttttactttggggact	CRISPR spacer
gtatgtacacgcccttgagtgcttgctcgtttttactttggggact	Protospacer
**********************************************

9. spacer 1.9|1216|39|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gcttaatatcgttctcggctcccttcacttgaattgtaa	CRISPR spacer
gcttaatatcgttctcggctcccttcacttgaattgtaa	Protospacer
***************************************

10. spacer 1.10|1290|37|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaaaagtgaaaaacaacgcaaaacgcactaaacttt	CRISPR spacer
aaaaaagtgaaaaacaacgcaaaacgcactaaacttt	Protospacer
*************************************

11. spacer 1.11|1362|33|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atggtaaatcggggacgccatcaaatccagcgc	CRISPR spacer
atggtaaatcggggacgccatcaaatccagcgc	Protospacer
*********************************

12. spacer 1.12|1430|41|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tcccacggtggggagcatgggcccatcccagttgcgggtaa	CRISPR spacer
tcccacggtggggagcatgggcccatcccagttgcgggtaa	Protospacer
*****************************************

13. spacer 1.13|1506|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tcaccccttgtggtatgacaaagtaaacggtggcattt	CRISPR spacer
tcaccccttgtggtatgacaaagtaaacggtggcattt	Protospacer
**************************************

14. spacer 1.14|1579|40|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

acatttctgcatagtgtcgaacggcacagtttgctgggaa	CRISPR spacer
acatttctgcatagtgtcgaacggcacagtttgctgggaa	Protospacer
****************************************

15. spacer 1.15|1654|35|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtccttaaggataagcttccagctccataggaga	CRISPR spacer
agtccttaaggataagcttccagctccataggaga	Protospacer
***********************************

16. spacer 1.16|1724|47|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggttaataaaacctaccaaagttttgggtaggtcctccccggagaga	CRISPR spacer
ggttaataaaacctaccaaagttttgggtaggtcctccccggagaga	Protospacer
***********************************************

17. spacer 1.17|1806|34|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaggagcacagctgcttctgttgtctgccgatt	CRISPR spacer
ctaggagcacagctgcttctgttgtctgccgatt	Protospacer
**********************************

18. spacer 1.18|1875|39|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atgaagtgccccatcgcttctactaactcgggcctctct	CRISPR spacer
atgaagtgccccatcgcttctactaactcgggcctctct	Protospacer
***************************************

19. spacer 1.19|1949|37|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggttaatcgtgaaccaagccacgaaaccccgtgtggt	CRISPR spacer
ggttaatcgtgaaccaagccacgaaaccccgtgtggt	Protospacer
*************************************

20. spacer 1.20|2021|36|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cacgatttctattgctggagattctcttagaggttc	CRISPR spacer
cacgatttctattgctggagattctcttagaggttc	Protospacer
************************************

21. spacer 1.21|2092|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aggatttggtcctcgggaagttttacagtggttctttt	CRISPR spacer
aggatttggtcctcgggaagttttacagtggttctttt	Protospacer
**************************************

22. spacer 1.22|2165|33|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aatgtacggaacgggcctcaagggttcttccga	CRISPR spacer
aatgtacggaacgggcctcaagggttcttccga	Protospacer
*********************************

23. spacer 2.1|3456|40|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtcggggtcgggtcggaggtagcaaagggctatcttttc	CRISPR spacer
agtcggggtcgggtcggaggtagcaaagggctatcttttc	Protospacer
****************************************

24. spacer 2.2|3531|36|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttttgttcacaggttttgtgaatccttttagatcc	CRISPR spacer
cttttgttcacaggttttgtgaatccttttagatcc	Protospacer
************************************

25. spacer 2.3|3602|42|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaatgtgcggagaaatgcaccaatagtagacgtccctgaat	CRISPR spacer
aaaatgtgcggagaaatgcaccaatagtagacgtccctgaat	Protospacer
******************************************

26. spacer 2.4|3679|33|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtaggttgcgtacaaccaaacggagcccacata	CRISPR spacer
gtaggttgcgtacaaccaaacggagcccacata	Protospacer
*********************************

27. spacer 2.5|3747|38|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaggagacacaaagaccagtagaagatagagtatcac	CRISPR spacer
ttaggagacacaaagaccagtagaagatagagtatcac	Protospacer
**************************************

28. spacer 2.6|3820|41|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgatcgaggtgagcgatcgagtaacggaggttctggtatg	CRISPR spacer
gtgatcgaggtgagcgatcgagtaacggaggttctggtatg	Protospacer
*****************************************

29. spacer 2.7|3896|34|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gatagctctcaatccggcgggacgcctcgagata	CRISPR spacer
gatagctctcaatccggcgggacgcctcgagata	Protospacer
**********************************

30. spacer 2.8|3456|41|NZ_CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtcggggtcgggtcggaggtagcaaagggctatcttttcc	CRISPR spacer
agtcggggtcgggtcggaggtagcaaagggctatcttttcc	Protospacer
*****************************************

31. spacer 2.9|3531|37|NZ_CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttttgttcacaggttttgtgaatccttttagatccc	CRISPR spacer
cttttgttcacaggttttgtgaatccttttagatccc	Protospacer
*************************************

32. spacer 2.10|3602|43|NZ_CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaatgtgcggagaaatgcaccaatagtagacgtccctgaatc	CRISPR spacer
aaaatgtgcggagaaatgcaccaatagtagacgtccctgaatc	Protospacer
*******************************************

33. spacer 2.11|3679|34|NZ_CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtaggttgcgtacaaccaaacggagcccacatac	CRISPR spacer
gtaggttgcgtacaaccaaacggagcccacatac	Protospacer
**********************************

34. spacer 2.12|3747|39|NZ_CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaggagacacaaagaccagtagaagatagagtatcacc	CRISPR spacer
ttaggagacacaaagaccagtagaagatagagtatcacc	Protospacer
***************************************

35. spacer 2.13|3820|42|NZ_CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgatcgaggtgagcgatcgagtaacggaggttctggtatgc	CRISPR spacer
gtgatcgaggtgagcgatcgagtaacggaggttctggtatgc	Protospacer
******************************************

36. spacer 2.14|3896|35|NZ_CP025929|PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gatagctctcaatccggcgggacgcctcgagatac	CRISPR spacer
gatagctctcaatccggcgggacgcctcgagatac	Protospacer
***********************************

37. spacer 3.1|5320|48|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgccttggcttcatcttccgacaaatccatgcactcttgcatggatt	CRISPR spacer
ttgccttggcttcatcttccgacaaatccatgcactcttgcatggatt	Protospacer
************************************************

38. spacer 3.2|5403|35|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaattgtactcatcacttgatgacagaactcaac	CRISPR spacer
aaaattgtactcatcacttgatgacagaactcaac	Protospacer
***********************************

39. spacer 3.3|5473|36|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tggatgctcaatcgcccatacctgacctgctgacag	CRISPR spacer
tggatgctcaatcgcccatacctgacctgctgacag	Protospacer
************************************

40. spacer 3.4|5544|33|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttctgcaaaacggagaacgatatagtcatcgt	CRISPR spacer
cttctgcaaaacggagaacgatatagtcatcgt	Protospacer
*********************************

41. spacer 3.5|5612|36|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tacaaagggagaattgtctcactttttcttttattt	CRISPR spacer
tacaaagggagaattgtctcactttttcttttattt	Protospacer
************************************

42. spacer 3.6|5683|36|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtttagtttccactaaatccgatgcatcttcgacat	CRISPR spacer
gtttagtttccactaaatccgatgcatcttcgacat	Protospacer
************************************

43. spacer 3.7|5754|37|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cttttggggcccaaaaggccttggggaagatagcccc	CRISPR spacer
cttttggggcccaaaaggccttggggaagatagcccc	Protospacer
*************************************

44. spacer 3.8|5826|37|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gatactccacaataaaggtgttgagatatgatttctc	CRISPR spacer
gatactccacaataaaggtgttgagatatgatttctc	Protospacer
*************************************

45. spacer 3.9|5898|34|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aatataggtaacgcttccatacccatattccata	CRISPR spacer
aatataggtaacgcttccatacccatattccata	Protospacer
**********************************

46. spacer 3.10|5967|31|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtctaatgctccgataccgattttctgcaca	CRISPR spacer
gtctaatgctccgataccgattttctgcaca	Protospacer
*******************************

47. spacer 3.11|6033|42|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtttgcacacgcaaccaaaacaaaaacccaaaacagaagaca	CRISPR spacer
gtttgcacacgcaaccaaaacaaaaacccaaaacagaagaca	Protospacer
******************************************

48. spacer 4.1|23226|39|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttacattttgggcggggcgagtataatcatcaaaccgct	CRISPR spacer
ttacattttgggcggggcgagtataatcatcaaaccgct	Protospacer
***************************************

49. spacer 4.2|23300|49|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gctcctctggatacagaggagtaagccagcgtagtcggcttccttctgt	CRISPR spacer
gctcctctggatacagaggagtaagccagcgtagtcggcttccttctgt	Protospacer
*************************************************

50. spacer 4.3|23384|40|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cattttggttggttttaaagagctccagctcatcccttct	CRISPR spacer
cattttggttggttttaaagagctccagctcatcccttct	Protospacer
****************************************

51. spacer 4.4|23459|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgccgccgtcgggctgctccttgatgttaaacacgggt	CRISPR spacer
tgccgccgtcgggctgctccttgatgttaaacacgggt	Protospacer
**************************************

52. spacer 4.5|23532|39|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtctccatgttgtccattgtgaaattttttcccatacag	CRISPR spacer
gtctccatgttgtccattgtgaaattttttcccatacag	Protospacer
***************************************

53. spacer 4.6|23606|41|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttccattccccttcgggatcgggatcgggatcgggatc	CRISPR spacer
tttttccattccccttcgggatcgggatcgggatcgggatc	Protospacer
*****************************************

54. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
gacagcgaggtttttccaacttgaaaaataaaaaaccc	Protospacer
**************************************

55. spacer 4.8|23755|43|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgggttagaatttcctcgacgcccggtgacgtgaggaaatcaa	CRISPR spacer
tgggttagaatttcctcgacgcccggtgacgtgaggaaatcaa	Protospacer
*******************************************

56. spacer 4.9|23833|42|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctttttttatcatactttgattctactacttggtatccaatt	CRISPR spacer
ctttttttatcatactttgattctactacttggtatccaatt	Protospacer
******************************************

57. spacer 4.10|23910|43|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccggagggccggggggttagggttttactctgctgtatctttt	CRISPR spacer
ccggagggccggggggttagggttttactctgctgtatctttt	Protospacer
*******************************************

58. spacer 4.11|23988|34|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttctaaactacgcttggcaaggctttttgagcac	CRISPR spacer
ttctaaactacgcttggcaaggctttttgagcac	Protospacer
**********************************

59. spacer 4.12|24057|33|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtgcttttttaagcacaaacaaccaaattgt	CRISPR spacer
ctgtgcttttttaagcacaaacaaccaaattgt	Protospacer
*********************************

60. spacer 4.13|24125|33|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gttttttggcggcgttgtatcttcccatagaag	CRISPR spacer
gttttttggcggcgttgtatcttcccatagaag	Protospacer
*********************************

61. spacer 4.14|24193|43|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cacgagcccaccaaacggtgaatctgtgcagtggttcttaaaa	CRISPR spacer
cacgagcccaccaaacggtgaatctgtgcagtggttcttaaaa	Protospacer
*******************************************

62. spacer 4.15|24271|43|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggttgtatcgcacagaactcactattctttgctaccgtgccat	CRISPR spacer
ggttgtatcgcacagaactcactattctttgctaccgtgccat	Protospacer
*******************************************

63. spacer 4.16|24349|39|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gattggaggttcgctcctttcaattcttccactaaaact	CRISPR spacer
gattggaggttcgctcctttcaattcttccactaaaact	Protospacer
***************************************

64. spacer 4.17|24423|35|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gaagtcgtctacccagaacatgaaaccgaaacata	CRISPR spacer
gaagtcgtctacccagaacatgaaaccgaaacata	Protospacer
***********************************

65. spacer 4.18|24493|42|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atcccatccttcgccatcgaccaatctttcgataaaggctaa	CRISPR spacer
atcccatccttcgccatcgaccaatctttcgataaaggctaa	Protospacer
******************************************

66. spacer 4.19|24570|38|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cctcacaagggggtggagaagagggggcggggataaga	CRISPR spacer
cctcacaagggggtggagaagagggggcggggataaga	Protospacer
**************************************

67. spacer 4.20|24643|39|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttgctcccctgtacacgaagggttactttccccggaaa	CRISPR spacer
tttgctcccctgtacacgaagggttactttccccggaaa	Protospacer
***************************************

68. spacer 4.21|24717|40|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gttatgatttctcctgtttgtgttttgttttactgataac	CRISPR spacer
gttatgatttctcctgtttgtgttttgttttactgataac	Protospacer
****************************************

69. spacer 4.22|24792|35|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gagggatactattatttccacttttggcacttcgg	CRISPR spacer
gagggatactattatttccacttttggcacttcgg	Protospacer
***********************************

70. spacer 4.23|24862|43|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

actgttttggatgccttcagttcccgtcatggtgtcgacataa	CRISPR spacer
actgttttggatgccttcagttcccgtcatggtgtcgacataa	Protospacer
*******************************************

71. spacer 4.24|24940|35|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttgtcgggagcagtacccccagggagctcttcgt	CRISPR spacer
tttgtcgggagcagtacccccagggagctcttcgt	Protospacer
***********************************

72. spacer 4.25|25010|39|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

catcccagttgcgggtaacggcgctctccttaaaggaga	CRISPR spacer
catcccagttgcgggtaacggcgctctccttaaaggaga	Protospacer
***************************************

73. spacer 4.26|25084|36|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtttccaaccaattttgctgattttgggctgagtt	CRISPR spacer
tgtttccaaccaattttgctgattttgggctgagtt	Protospacer
************************************

74. spacer 4.27|25155|40|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccaagccgtaaagtccaaaatccaggacaacagccgtcgt	CRISPR spacer
ccaagccgtaaagtccaaaatccaggacaacagccgtcgt	Protospacer
****************************************

75. spacer 4.28|25230|40|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gctggggagggtagaacgctaacttgttgtcgcacaagaa	CRISPR spacer
gctggggagggtagaacgctaacttgttgtcgcacaagaa	Protospacer
****************************************

76. spacer 4.29|25305|43|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gctaaagtcaccaagaaaatgaagggactccttctcgtcattt	CRISPR spacer
gctaaagtcaccaagaaaatgaagggactccttctcgtcattt	Protospacer
*******************************************

77. spacer 4.30|25383|35|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaagactattcctgctattatgacgcctactatg	CRISPR spacer
aaaagactattcctgctattatgacgcctactatg	Protospacer
***********************************

78. spacer 4.31|25453|34|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaacaaaaacagacaacggcatttttttcatg	CRISPR spacer
gagaacaaaaacagacaacggcatttttttcatg	Protospacer
**********************************

79. spacer 4.32|25522|37|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtggaattgtcccagatatccccacttaagcgagg	CRISPR spacer
ctgtggaattgtcccagatatccccacttaagcgagg	Protospacer
*************************************

80. spacer 4.33|25594|39|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

acaacgaaatagattctttctatttcgtctttgatagtt	CRISPR spacer
acaacgaaatagattctttctatttcgtctttgatagtt	Protospacer
***************************************

81. spacer 4.34|25668|36|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgagtaaaagccaccgccaacgctcgattaatgcga	CRISPR spacer
tgagtaaaagccaccgccaacgctcgattaatgcga	Protospacer
************************************

82. spacer 4.35|25739|37|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcatttactgtgagttctggtcccggatagttgac	CRISPR spacer
tgtcatttactgtgagttctggtcccggatagttgac	Protospacer
*************************************

83. spacer 4.36|25811|32|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
gaaaaaccattactgccgctactggcaagagg	Protospacer
********************************

84. spacer 4.37|25878|44|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccctggtaggctttacccgtgatccaggtttccaaaatggaacc	CRISPR spacer
ccctggtaggctttacccgtgatccaggtttccaaaatggaacc	Protospacer
********************************************

85. spacer 4.38|25957|33|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

caacaaaattccctttgtcgcccaagctgcagt	CRISPR spacer
caacaaaattccctttgtcgcccaagctgcagt	Protospacer
*********************************

86. spacer 4.39|26025|35|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgaaaaaccgcgagttctaaggcatccttatctc	CRISPR spacer
gtgaaaaaccgcgagttctaaggcatccttatctc	Protospacer
***********************************

87. spacer 4.40|26095|38|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtgacctcttgttcaagcactacacattgaattgaat	CRISPR spacer
cgtgacctcttgttcaagcactacacattgaattgaat	Protospacer
**************************************

88. spacer 4.41|26168|40|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tcagtaatggccgtgtattctagatattcctctagaccat	CRISPR spacer
tcagtaatggccgtgtattctagatattcctctagaccat	Protospacer
****************************************

89. spacer 4.42|26243|40|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgttttttactaccaaggcgaaccctgcgaagtttagca	CRISPR spacer
tcgttttttactaccaaggcgaaccctgcgaagtttagca	Protospacer
****************************************

90. spacer 4.43|26318|34|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtgcgtacgatttgcacaacttaaacttaccgc	CRISPR spacer
cgtgcgtacgatttgcacaacttaaacttaccgc	Protospacer
**********************************

91. spacer 4.44|26387|38|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtagcagcagcagttaaaccgatggtggtatagattt	CRISPR spacer
agtagcagcagcagttaaaccgatggtggtatagattt	Protospacer
**************************************

92. spacer 4.45|26460|40|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggatacaccgtggtgcatcctatgcgtttcctacgtgatc	CRISPR spacer
ggatacaccgtggtgcatcctatgcgtttcctacgtgatc	Protospacer
****************************************

93. spacer 4.46|26535|39|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgcgtatcgcgttttggacacatatagtccattcaa	CRISPR spacer
ttccgcgtatcgcgttttggacacatatagtccattcaa	Protospacer
***************************************

94. spacer 4.47|26609|40|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

accacaccaacttccccgtcaaggaaagcatttgtggagc	CRISPR spacer
accacaccaacttccccgtcaaggaaagcatttgtggagc	Protospacer
****************************************

95. spacer 4.48|26684|35|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

accggaagggtcagtgacagcgtgtgtttctcagg	CRISPR spacer
accggaagggtcagtgacagcgtgtgtttctcagg	Protospacer
***********************************

96. spacer 4.49|26754|38|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

taaggtatgggtggactatcaaaaaaatcaattgaatt	CRISPR spacer
taaggtatgggtggactatcaaaaaaatcaattgaatt	Protospacer
**************************************

97. spacer 4.50|26827|38|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

acgatacgagaagggattgggatgctggcaaggacagc	CRISPR spacer
acgatacgagaagggattgggatgctggcaaggacagc	Protospacer
**************************************

98. spacer 4.51|26900|40|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atgggcctccccatacggtcagaatgatggcggctgcaaa	CRISPR spacer
atgggcctccccatacggtcagaatgatggcggctgcaaa	Protospacer
****************************************

99. spacer 4.52|26975|38|NZ_CP025929|CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaaaacactgtacacctttccaaactttggatacca	CRISPR spacer
gtcaaaacactgtacacctttccaaactttggatacca	Protospacer
**************************************

100. spacer 5.1|60561|41|NZ_CP025929|CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

cagaatcgagaaacacagcgagaaaacaagcgagagtgttg	CRISPR spacer
cagaatcgagaaacacagcgagaaaacaagcgagagtgttg	Protospacer
*****************************************

101. spacer 6.1|105454|36|NZ_CP025929|CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gctcagatcataagtagcaacaattgaccggtgaaa	CRISPR spacer
gctcagatcataagtagcaacaattgaccggtgaaa	Protospacer
************************************

102. spacer 6.2|105527|34|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgatccgaggcttgagggagcatcttttcccaa	CRISPR spacer
gtgatccgaggcttgagggagcatcttttcccaa	Protospacer
**********************************

103. spacer 6.3|105598|35|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgttataggtgacacggggataagtgatcttgtt	CRISPR spacer
ccgttataggtgacacggggataagtgatcttgtt	Protospacer
***********************************

104. spacer 6.4|105670|37|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ggttaggacacggtaaaccatcgatgattaatctagt	CRISPR spacer
ggttaggacacggtaaaccatcgatgattaatctagt	Protospacer
*************************************

105. spacer 6.5|105744|35|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttggagacgggagcctctttgtcttttaaccaaag	CRISPR spacer
ttggagacgggagcctctttgtcttttaaccaaag	Protospacer
***********************************

106. spacer 6.6|105816|36|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

attaagagatttcccaatctgaggaacgactacaat	CRISPR spacer
attaagagatttcccaatctgaggaacgactacaat	Protospacer
************************************

107. spacer 6.7|105889|36|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aattaatagccgggtgactggggcgactcaggcgga	CRISPR spacer
aattaatagccgggtgactggggcgactcaggcgga	Protospacer
************************************

108. spacer 6.8|105962|36|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

actcaatctccccacccaacggtcagacataggaaa	CRISPR spacer
actcaatctccccacccaacggtcagacataggaaa	Protospacer
************************************

109. spacer 6.9|106035|36|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcttaatagtcaaatgagttgttttcagggtta	CRISPR spacer
tttgcttaatagtcaaatgagttgttttcagggtta	Protospacer
************************************

110. spacer 6.10|106108|36|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

atttttttatattccatcctcttttaatcgataaaa	CRISPR spacer
atttttttatattccatcctcttttaatcgataaaa	Protospacer
************************************

111. spacer 6.11|106181|34|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agatttctggtgaggatttcgtgcgatcgactgc	CRISPR spacer
agatttctggtgaggatttcgtgcgatcgactgc	Protospacer
**********************************

112. spacer 6.12|106252|35|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtccccccgatcgcgatcagagcatttatccca	CRISPR spacer
ctgtccccccgatcgcgatcagagcatttatccca	Protospacer
***********************************

113. spacer 6.13|106324|40|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aagggttttccagtggtgaggaaatagtgcaaagatagct	CRISPR spacer
aagggttttccagtggtgaggaaatagtgcaaagatagct	Protospacer
****************************************

114. spacer 6.14|106401|35|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

tttattgaatcctcgccaaaagcgaggctttttct	CRISPR spacer
tttattgaatcctcgccaaaagcgaggctttttct	Protospacer
***********************************

115. spacer 6.15|106473|34|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

taaagagggaaaatccgttcatctaccaatagct	CRISPR spacer
taaagagggaaaatccgttcatctaccaatagct	Protospacer
**********************************

116. spacer 6.16|106544|36|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttatcaaaactgaatcagcccaatttcaaatacc	CRISPR spacer
ttttatcaaaactgaatcagcccaatttcaaatacc	Protospacer
************************************

117. spacer 6.17|106617|35|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aaggatagttctattatgaaggatttggtggttca	CRISPR spacer
aaggatagttctattatgaaggatttggtggttca	Protospacer
***********************************

118. spacer 6.18|106689|37|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgtgttccacaaaacaggggaacaaatcgccaagaa	CRISPR spacer
ccgtgttccacaaaacaggggaacaaatcgccaagaa	Protospacer
*************************************

119. spacer 6.19|106763|35|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aggactaaaaagcctttacacgactacttacacca	CRISPR spacer
aggactaaaaagcctttacacgactacttacacca	Protospacer
***********************************

120. spacer 6.20|106835|36|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

caggccaacaaaaagccgaactctttatattcaaat	CRISPR spacer
caggccaacaaaaagccgaactctttatattcaaat	Protospacer
************************************

121. spacer 6.21|106908|36|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

ttattagaaatcagcaccggataccccaacttgagt	CRISPR spacer
ttattagaaatcagcaccggataccccaacttgagt	Protospacer
************************************

122. spacer 6.22|106981|34|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

aagagttttatagcgttgcggctacgaaacactt	CRISPR spacer
aagagttttatagcgttgcggctacgaaacactt	Protospacer
**********************************

123. spacer 6.23|107052|34|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gaggctttgtaaaaaattcgatagttggatttgg	CRISPR spacer
gaggctttgtaaaaaattcgatagttggatttgg	Protospacer
**********************************

124. spacer 6.23|107052|34|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to LC425525 (Uncultured phage DNA, contig: NODE869) position: , mismatch: 2, identity: 0.941

gaggctttgtaaaaaattcgatagttggatttgg	CRISPR spacer
gaagctttgtaaaaaattcgataattggatttgg	Protospacer
**.********************.**********

125. spacer 6.22|106981|34|NZ_CP025929|CRT,PILER-CR,CRISPRCasFinder matches to LC425515 (Uncultured phage DNA, contig: NODE375) position: , mismatch: 3, identity: 0.912

aagagttttatagcgttgcggctacgaaacactt-	CRISPR spacer
aagagttttatagcgttgcggctacaaaa-actaa	Protospacer
*************************.*** ***

126. spacer 4.38|25957|33|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to AP017628 (Pleomorphomonas sp. SM30 plasmid pSM30-2 DNA, complete genome) position: , mismatch: 9, identity: 0.727

caacaaaattccctttgtcgcccaagctgcagt	CRISPR spacer
tctcaacattcccttcgtcgcccaagcagatga	Protospacer
.  *** ********.*********** *  *

127. spacer 1.4|844|35|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.714

gactagttgttctggggcccaaaaagccttgggga	CRISPR spacer
atggaaaccttttggggcccaaaaggccttgggga	Protospacer
.   *. . **.************.**********

128. spacer 4.31|25453|34|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

gagaacaaaaacagacaacggcatttttttcatg	CRISPR spacer
aaacggacaaacagacatcggcatttttgtcagc	Protospacer
.*. . * ********* ********** ***

129. spacer 4.31|25453|34|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021133 (Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

gagaacaaaaacagacaacggcatttttttcatg	CRISPR spacer
cagaacaaaaacgaacaacggcattgtcaggcgg	Protospacer
 ***********..*********** *.     *

130. spacer 4.36|25811|32|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 10, identity: 0.688

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
tttttaccattactgccgctgctggcaatcta	Protospacer
     ***************.*******   .

131. spacer 3.7|5754|37|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.703

cttttggggcccaaaaggccttggggaagatagcccc	CRISPR spacer
gttctggggcccaaaaagccttggggacttttaactt	Protospacer
 **.************.**********   * . *..

132. spacer 4.36|25811|32|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to MK448701 (Streptococcus phage Javan197, complete genome) position: , mismatch: 11, identity: 0.656

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
tttttaccattactgcctctgctggcaatgta	Protospacer
     ************ **.******* . .

133. spacer 4.36|25811|32|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to MK448869 (Streptococcus phage Javan190, complete genome) position: , mismatch: 11, identity: 0.656

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
tttttaccattactgcctctgctggcaatgta	Protospacer
     ************ **.******* . .

134. spacer 4.36|25811|32|NZ_CP025929|CRISPRCasFinder,CRT,PILER-CR matches to MK448870 (Streptococcus phage Javan192, complete genome) position: , mismatch: 11, identity: 0.656

gaaaaaccattactgccgctactggcaagagg	CRISPR spacer
tttttaccattactgcctctgctggcaatgta	Protospacer
     ************ **.******* . .

135. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

136. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

137. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

138. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

139. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

140. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

141. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

142. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

143. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

144. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

145. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

146. spacer 4.7|23682|38|NZ_CP025929|PILER-CR,CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 12, identity: 0.684

gacagcgaggtttttccaacttgaaaaataaaaaaccc	CRISPR spacer
aagttaccggtttttcaaactttaaaaataaaaaattt	Protospacer
.*      ******** ***** ************...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

79284 : 127548

Microcystis_virus(21.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_103672798.1\|79284_80397_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0R8V9X2	Thermobifida_phage	7.8e-121	59.1
WP_103672799.1\|80522_80894_+	hypothetical protein	NA	NA	NA	NA
WP_103672801.1\|81275_81593_+	hypothetical protein	NA	NA	NA	NA
WP_103672802.1\|81589_82000_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_103672803.1\|81980_82850_+	hypothetical protein	NA	NA	NA	NA
WP_103672804.1\|83024_83249_+	hypothetical protein	NA	NA	NA	NA
WP_103672805.1\|83475_83661_+	hypothetical protein	NA	NA	NA	NA
WP_103672806.1\|83775_84426_+	DUF1295 domain-containing protein	NA	NA	NA	NA
WP_158657277.1\|84520_85120_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_158657278.1\|85136_85907_-	hypothetical protein	NA	NA	NA	NA
WP_162496093.1\|86019_86250_+	hypothetical protein	NA	NA	NA	NA
WP_103672809.1\|86183_86423_-	DUF1830 domain-containing protein	NA	NA	NA	NA
WP_103672810.1\|86489_86675_-	hypothetical protein	NA	NA	NA	NA
WP_103672811.1\|86881_88555_+	GMC oxidoreductase	NA	NA	NA	NA
WP_103672813.1\|89052_89586_+	hypothetical protein	NA	NA	NA	NA
WP_158657279.1\|89687_89846_+	hypothetical protein	NA	NA	NA	NA
WP_103672814.1\|90025_90532_+	hypothetical protein	NA	NA	NA	NA
WP_158657280.1\|90579_90771_+	hypothetical protein	NA	NA	NA	NA
WP_103672816.1\|90820_91147_+	hypothetical protein	A0A7S2	Microcystis_virus	2.3e-33	62.0
WP_103672817.1\|91205_91442_+	hypothetical protein	NA	NA	NA	NA
WP_103672818.1\|91482_91857_+	hypothetical protein	NA	NA	NA	NA
WP_149976704.1\|91923_92130_-	hypothetical protein	NA	NA	NA	NA
WP_149976705.1\|92306_92627_+	hypothetical protein	NA	NA	NA	NA
WP_103672820.1\|93523_93736_+	hypothetical protein	NA	NA	NA	NA
WP_158657286.1\|93853_95191_+	hypothetical protein	K9RZE6	Philosamia_cynthia_ricini_nucleopolyhedrovirus	2.1e-11	41.0
WP_046660896.1\|95205_96354_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_103672821.1\|96334_97954_+	hypothetical protein	E7DNC5	Pneumococcus_phage	1.2e-24	29.7
WP_103672822.1\|97950_98214_-	hypothetical protein	NA	NA	NA	NA
WP_103672880.1\|98203_98551_-	hypothetical protein	NA	NA	NA	NA
WP_158657281.1\|98867_99677_+	HTH domain-containing protein	NA	NA	NA	NA
WP_103672825.1\|99828_103542_+	hypothetical protein	NA	NA	NA	NA
WP_158657282.1\|103538_103688_+	hypothetical protein	NA	NA	NA	NA
WP_103672826.1\|103767_104319_+	hypothetical protein	NA	NA	NA	NA
WP_103672827.1\|104333_105062_+	hypothetical protein	NA	NA	NA	NA
WP_103672881.1\|107220_109008_-\|transposase	transposase	A0A2H4PB66	Aphanizomenon_phage	5.4e-55	34.9
WP_103672829.1\|109432_110119_+	hypothetical protein	NA	NA	NA	NA
WP_103672830.1\|110124_110316_+	hypothetical protein	NA	NA	NA	NA
WP_103672833.1\|112166_112508_+	DUF4326 domain-containing protein	U5XK15	Phormidium_phage	1.2e-16	40.4
WP_103672834.1\|112579_113662_+	hypothetical protein	NA	NA	NA	NA
WP_103672835.1\|113724_114096_+	hypothetical protein	NA	NA	NA	NA
WP_103672836.1\|114649_115000_+	DUF2493 domain-containing protein	A0A2I7S0C0	Vibrio_phage	1.4e-28	51.8
WP_103672882.1\|115458_115932_+	hypothetical protein	NA	NA	NA	NA
WP_103672837.1\|116112_116778_+	hypothetical protein	NA	NA	NA	NA
WP_103672838.1\|117281_117548_+	hypothetical protein	NA	NA	NA	NA
WP_103672839.1\|117614_118514_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.4e-35	32.1
WP_103672840.1\|118639_119311_+	hypothetical protein	A0A2H4GYA3	Pseudomonas_phage	8.0e-44	42.3
WP_103672841.1\|119434_120262_+	SAM-dependent methyltransferase	A8HNV9	Thalassomonas_phage	1.4e-18	40.4
WP_103672842.1\|120252_121425_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A7P9	Microcystis_virus	4.4e-215	97.4
WP_046663506.1\|121402_122011_-\|transposase	IS607 family transposase	A0A7Q0	Microcystis_virus	4.6e-107	98.5
WP_103672843.1\|122073_122328_+	hypothetical protein	A8HNV9	Thalassomonas_phage	1.3e-10	39.3
WP_103672844.1\|122474_122804_+	hypothetical protein	NA	NA	NA	NA
WP_158657283.1\|122874_123048_+	hypothetical protein	NA	NA	NA	NA
WP_103672845.1\|123123_123501_+	hypothetical protein	NA	NA	NA	NA
WP_103672846.1\|123621_123840_+	hypothetical protein	NA	NA	NA	NA
WP_103672847.1\|124173_124533_+	hypothetical protein	NA	NA	NA	NA
WP_158657284.1\|124638_124818_+	hypothetical protein	NA	NA	NA	NA
WP_103672849.1\|125021_125543_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_103672850.1\|125603_125867_+	hypothetical protein	NA	NA	NA	NA
WP_103672851.1\|126414_127548_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWN4	Bacteriophage	1.5e-114	56.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage