CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP016889	Pantoea agglomerans strain C410P1 chromosome, complete genome	8 crisprs	cas3,DEDDh,DinG	1	5	4
NZ_CP016891	Pantoea agglomerans strain C410P1 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	2
NZ_CP016892	Pantoea agglomerans strain C410P1 plasmid unnamed3, complete sequence	0 crisprs	NA	0	0	0
NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	3 crisprs	csa3	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016889_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016889_1

25214-25354

Orphan

Consensus_repeat	Method
CAGCAGACAGAATGTTATTCAACCCGCCCGCTGTTATCTCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016889_1

>merge|NZ_CP016889|1|25214-25354|CRISPRCasFinder
CAGCAGACAGAATGTTATTCAACCCGCCCGCTGTTATCTCTGCTTTTTATGTCGGGTACTTTATCGCTGTGGGTTTTGGGATTGCCTCGGACTTTTGGCGCAGCAGACAGAATGTTATTCAACCTGCCCGCTGTTATCTCT

>NZ_CP016889|1|1|25214-25354|CRISPRCasFinder
CAGCAGACAGAATGTTATTCAACCCGCCCGCTGTTATCTCT	GCTTTTTATGTCGGGTACTTTATCGCTGTGGGTTTTGGGATTGCCTCGGACTTTTGGCG
CAGCAGACAGAATGTTATTCAACCTGCCCGCTGTTATCTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016889.1\|WP_069025143.1\|27496_28531_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP016889.1\|WP_031591249.1\|20051_21521_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|365919
NZ_CP016889.1\|WP_010247907.1\|30062_30986_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380524
NZ_CP016889.1\|WP_155763502.1\|24719_24896_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016889.1\|WP_081325906.1\|34100_36263_+\|ferric-rhodotorulic-acid/ferric-coprogen-receptor-FhuE	unknown	unknown	gnl\|CDD\|236640
NZ_CP016889.1\|WP_069025145.1\|31964_32318_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|227028
NZ_CP016889.1\|WP_069025146.1\|36390_36663_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016889.1\|WP_031591097.1\|14544_15396_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP016889.1\|WP_069025147.1\|37335_39258_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP016889.1\|WP_069025140.1\|21967_23425_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NZ_CP016889.1\|WP_039389569.1\|23585_24545_-\|HTH-type-transcriptional-regulator-Cbl	unknown	unknown	gnl\|CDD\|183676
NZ_CP016889.1\|WP_010247876.1\|16376_17984_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173868
NZ_CP016889.1\|WP_029519619.1\|32616_33705_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225926
NZ_CP016889.1\|WP_039389571.1\|21719_21986_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016889.1\|WP_069025142.1\|26124_27042_-\|nitrogen-assimilation-transcriptional-regulator-NAC	unknown	unknown	gnl\|CDD\|183045
NZ_CP016889.1\|WP_069025144.1\|28545_30030_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP016889.1\|WP_022624965.1\|18066_19344_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP016889.1\|WP_031591248.1\|19354_20023_-\|haloacid-dehalogenase-type-II	unknown	unknown	gnl\|CDD\|319787
NZ_CP016889.1\|WP_069025139.1\|15392_16349_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP016889.1\|WP_010247918.1\|31657_31960_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372700

Protein	Function_ID	Function_description	E-value
NZ_CP016889.1\|WP_069025143.1\|27496_28531_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	3.72772e-85
NZ_CP016889.1\|WP_031591249.1\|20051_21521_-\|aldehyde-dehydrogenase	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	0
NZ_CP016889.1\|WP_010247907.1\|30062_30986_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380524	cd06301, PBP1_rhizopine_binding-like, periplasmic binding proteins specific to rhizopines. Periplasmic binding proteins specific to rhizopines, which are simple sugar-like compounds produced in the nodules induced by the symbiotic root nodule bacteria, such as Rhizobium and Sinorhizobium. Rhizopine-binding-like proteins from other bacteria are also included. Two inositol based rhizopine compounds are known to date: L-3-O-methly-scyllo-inosamine (3-O-MSI) and scyllo-inosamine. Bacterial strains that can metabolize rhizopine have a greater competitive advantage in nodulation and rhizopine synthesis is regulated by NifA/NtrA regulatory transcription activators which are maximally expressed at the onset of nitrogen fixation in bacteroids. The members of this group belong to the pentose/hexose sugar-binding protein family of the type 1 periplasmic binding protein superfamily.	6.11144e-116
NZ_CP016889.1\|WP_069025145.1\|31964_32318_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|227028	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown].	1.12874e-46
NZ_CP016889.1\|WP_031591097.1\|14544_15396_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.26821e-67
NZ_CP016889.1\|WP_069025147.1\|37335_39258_+\|HAMP-domain-containing-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	3.06913e-113
NZ_CP016889.1\|WP_069025140.1\|21967_23425_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_CP016889.1\|WP_039389569.1\|23585_24545_-\|HTH-type-transcriptional-regulator-Cbl	gnl\|CDD\|183676	PRK12679, cbl, HTH-type transcriptional regulator Cbl.	0
NZ_CP016889.1\|WP_010247876.1\|16376_17984_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173868	cd08503, PBP2_NikA_DppA_OppA_like_17, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP016889.1\|WP_029519619.1\|32616_33705_-\|hypothetical-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	1.48699e-11
NZ_CP016889.1\|WP_081325906.1\|34100_36263_+\|ferric-rhodotorulic-acid/ferric-coprogen-receptor-FhuE	gnl\|CDD\|236640	PRK10003, PRK10003, ferric-rhodotorulic acid outer membrane transporter; Provisional.	0
NZ_CP016889.1\|WP_069025142.1\|26124_27042_-\|nitrogen-assimilation-transcriptional-regulator-NAC	gnl\|CDD\|183045	PRK11233, PRK11233, nitrogen assimilation transcriptional regulator; Provisional.	0
NZ_CP016889.1\|WP_069025144.1\|28545_30030_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP016889.1\|WP_022624965.1\|18066_19344_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	6.2186e-67
NZ_CP016889.1\|WP_031591248.1\|19354_20023_-\|haloacid-dehalogenase-type-II	gnl\|CDD\|319787	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase. L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation of L-2-haloacids to produce the corresponding D-2-hydroxyacids with an inversion of the C2-configuration. 2-haloacid dehalogenases are of interest for their potential to degrade recalcitrant halogenated environmental pollutants and their use in the synthesis of industrial chemicals. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.5821e-50
NZ_CP016889.1\|WP_069025139.1\|15392_16349_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.16765e-105
NZ_CP016889.1\|WP_010247918.1\|31657_31960_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|372700	pfam13744, HTH_37, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	9.26601e-07

>NZ_CP016889.1|WP_155763502.1|24719_24896_+|hypothetical-protein
MFAARTGYEKVSFAARTGYEKVSFAARTGYEKVSFAARTGYEKVSFAARTGYEKVSFA
>NZ_CP016889.1|WP_039389569.1|23585_24545_-|HTH-type-transcriptional-regulator-Cbl
MNFQQLKIIREAARCEFNLTEVANTLFTSQSGVSRHIRDLEDELGVEIFIRRGKRLLGMTEPGKALLTIAERILDEAGKVRRLADVFTNETSGILTIATTHTQARYSLPKVIKAFRQLYPNVRLELNQGSPQEIVTMLLAGEADIGIASELLVNNSSLAAFPWFSWHHALLVPKGHELVQNQPVSLSTLSRYPLITYRQGITGRSRVDRAFQTAGLKPDIVLSAQDSDVVKTYVKLGLGVGILADQACETEESEELVRLDATHLFDASTVWLGLKRGQLQRNYVWQFLELCNANLSLEEIKRQALSYSNDDEPVIDYQI
>NZ_CP016889.1|WP_069025140.1|21967_23425_-|NAD-dependent-succinate-semialdehyde-dehydrogenase
MSRLQLNDSDLLRQQALFNGRWQDAHQGATLPVTDPATGETLATIPALGRAETEQAIAYAETVRISWGKTTNASRAALLEKWHQLIIEHADDLAIIMTAEQGKPLAEARGEVLYGASFVKWFAEEARRIYGDTIPAPSEDRRILVLKQPVGVAAAITPWNFPIAMITRKVAPALAAGCPIIVKPSELTPLSALALAVLAERAGFPAGVLQVLTGLPTEIGAALTESRTVRKISFTGSTRIGQLLMQQSADSIKRLSLELGGNAPLIVFDDADIEIAVAGVMLSKFRNAGQTCVCANRILVQRSIYPRFTARLLEAVATLKVGDGFAPDSTIGPLINSRAVEKVNGHIDDALSQGATLLTGGISQGNGTFVQPTVLGEVTAAMRIAHEETFGPVAPLFIFDDEEEAIAMANDTPYGLGAYFFTENIRRAWRVAEALEFGMVGFNTGAISLEVAPFGGVKLSGIGREGSRYGIDEYLEQKTFHIGSL
>NZ_CP016889.1|WP_039389571.1|21719_21986_+|hypothetical-protein
MIYFTKFMRPAGATCTEIAPKRILLIRLLIPVRMTRRFNDPLHIPDKFFNFSEQLFDAGKFLLSLRQKKGQPDYPAGLFSIFSYRLPM
>NZ_CP016889.1|WP_031591249.1|20051_21521_-|aldehyde-dehydrogenase
MLSFDPEKVSLPAGHYIGGQHCQSQGASFEVKRPSDGRVYATLQDATPQDVDRAVTVAHQALKSSGWSGCPPRERGRVLRRWADLIEQDALLAQLEALGSTRPINDVVLHEIPFTAEAIRFYAECADKYSGDLFPTRDSSLGMLIAEPYGVIAAITPWNFPLSMASWKCGPALAAGNAVVLKPSELTPFSTVRMAELAIQAGLPAGVLNIVQGSGAVTGSALVKHPLVRKVSFTGSTLTGQRIMSDAAQHGMKPVTLELGGKSPQLVFDDAGDLEVLAQRILRGFTANGGQACVAGTRLIVQRNIADPLVERLAQLCREVKPGVTWQEDSRYAPLIDERQGNKVCSVIEAAKAQGAEVLVGGERFADTDDGWFWQPTLLSHVAQDNPAVQQEIFGPVLTVQTFDDEEQGLAMAAHDTYGLCAGVHTLSLPRALRAMRAIDAGTVWINRYGRSGDFIIPTGGFLGSGIGKDLGRQAFQACQRQKSVLIDF
>NZ_CP016889.1|WP_031591248.1|19354_20023_-|haloacid-dehalogenase-type-II
MALFKPKFITFDCYGTLIRFDMAGAAQRCFSDRVDPDAMLAFTTDFSSYRLDEVLGAWKPYYDVVSNALQRTCKKWGVRWDKADSDFIYTDCASWGPHPDVPAGLAKVAKEFPLVLLTNSMKDLIPHHEPRLGAPIYMAITAEETGAYKPQMKGFEYMLDKLGCGPEEILHVSSSFRYDLMTAHDLGIKNKVWVNRGHEPANPYYQYTEINDIGGLPGVVGL
>NZ_CP016889.1|WP_022624965.1|18066_19344_-|FAD-binding-oxidoreductase
MKLESFWQATAPAFTGAAREPLPAQADVVVIGGGFTGISAALNLARSGISVVLLESGDVMSQASARNGGHCNTGVAQNFASLVASQGLEQASRFYRAFDEAVSYVQQLIQDEAIDCDFRLCGKLKLASKASHVAGLQEAYELMRRTVDPEIELLDKTAVRDEIASDDFHGGLLQKRGGQMHMGKFGVGLAEAAARSGAKIFPHHAVTKLERLKGYQHRVETAQGTILADKVLMATGCSNVGPFPWFQRRIVPVGSFIVVTEALDPALLRQVLPNDRTYVTSLNIGNYFRTTADRRLVFGGRARFAVSNPTSDSRSGEILRRAMTQMLPQLGQSQVDYCWGGMVDMTADRLPHAGEQDGLFYSLGYSGHGTQMSVWMGRVMASLLAEKRTENPWQRDTWPALPGYHGKPWFLPLAGLYYKAKDRLS
>NZ_CP016889.1|WP_010247876.1|16376_17984_-|ABC-transporter-substrate-binding-protein
MSKFDNNDADAVNPALTRMITEGSLSRRSLMKMLSAGAVMSSGLITFSGAALADDKPVRGGKLRAAMSNASATDTLDPAKSNNSADYTRQFMFYSGLTELDKNLMAQPALAESLESSDGITWHIKLRKGVTFHDGKPLTAKDVIYSLSRHKDPAIASIAFKLADQFKTFSAVNDNEVQLELSSANFDVPYMLATPPFLIVPDGTKDFSKGIGTGPFVCKAFMPGVRTIGTKNPNYYKPGLPHLDEVELIGVTDGAARVNALMSGDLQMVSTLTAADCKRIKASSEFGVLESKSGMYTNLIIRTDVKPGNNEDFVLAMKYLQPREMLVKTVLQGYGDVSNDTPVPPWHPLYNADLKPRALDIEKAKFHIKKAGMAGSTVEIITTPNIEGANEGGQMIQQMARGAGLNIKVRRVPYDGYWSSHWMKDPVGYGSINPRPTLDMLFSQFYLSTAPNNESGWKNPQFDQLVVAARGERDQAKRKQMYGDMQTLIYDHCGTLIPTFISSTDGYNKKVKGVEAWPSGMMMGYRFHEFAWLSA
>NZ_CP016889.1|WP_069025139.1|15392_16349_-|ABC-transporter-permease
MNRYMLFLIARRIGAGILTLLIVSAVVFFITSLLPGDAAQMILGQNATPETVAALRQQLGLDQPLLMRYFHWLSGMVQGDFGTSFASHLPVSQLVAQRIPATFELAGITTLICVPLALIIGIIAAMNRGSRLDRALVIGTMATVAVPEFLVATVAVLIFAVKLHWVSAMSFGSPDSDLLSYLKAYALPVLTLCCVLVAQMARMTRAAIINQLDSPYLEMALLKGVSPLRAVLRHALPNAVGPIANAISLSLSYLFGGVIIIETIFSYPGLASQLVDAVSNRDLPVVQLCVMLFAACYLVLLLAADILTIAFNPKWRSA
>NZ_CP016889.1|WP_031591097.1|14544_15396_-|ABC-transporter-permease
MNILSLPWRFLQSLSWSGRLGLIMSLFWLLMAVFGTPLAPHSIDDIGGGPLMGGLTSDNLLGTDYLGRDMLSRILYGAKFSIGLALSAALLASLIGTLLALLAAVAGRWLEELLGRVNDALLVLPGKVLSLMIVAVFGSSLPMLILTAVFTYWPGAFRIAFAMASSLRSMDYVRASRLRGESRWYIAIHDILPNMVHPMLTDFGLRFVYIVLLLSGLSFLGLGVQPPYADWGTLVRENMQGLFDGSPAVLMPALAIASLTIGANLFIDSLQAMRPMTLAKEGA
>NZ_CP016889.1|WP_069025142.1|26124_27042_-|nitrogen-assimilation-transcriptional-regulator-NAC
MNLRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLENELDQQLLIRTKRGVTPTEAGKILYGHARTILRQCEQAQTAVINAGQVLSGQVSIGLAPGTAASSLTMPLLQTVRDQFPEVLVYLHENSGSVLNEKVMNGQLDMAVLYDRAPTAGITSMPLMKEDLFLVGATDYPGASVDLADVAQMSLFLPRDYSAVRKRVDEAFSLRRLSARIIGEIESISTLTAAISSGMGVTVLPESAARSLVGSTDAWMSRINSPSLSLPLSLNVSARVPLSPSAQAVKNILLSLLNKPLSEERELMLVS
>NZ_CP016889.1|WP_069025143.1|27496_28531_-|ABC-transporter-permease
MSNMKATATPAAPQQPSFFASLRHKLPKDTGIFVVMVGIALIFEMFGWYVRDQSFLLNTNRLILIVLQVAIIGIIAVGVTQVIITTGIDLSSGSIIALAAVVAASLAQTSDSLSPMYPSLVNMPAVIPIAAGIGVGLLAGVVNGVLITRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDGFTSIGQGAMPVVIFLVVAFLFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLIIVYSIAGGLSGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAVILGLIKSGFTFVGVDAYIQDIIKGMIIVAAVSIDMHRNRKKR
>NZ_CP016889.1|WP_069025144.1|28545_30030_-|sugar-ABC-transporter-ATP-binding-protein
MNAFALEAEGISKFFPGVKALDNVSLRVRPGTVHALMGENGAGKSTLMKCLIGMYRPDQGTIKIKGEPVQFQDTMDALRSGISMIHQELNLVPYMTVAENIWLGREPMRFGFVDHARLNQMTQELLNRLNIRLKADRMVGELSIASQQMVEIAKAVSWDSDIVIMDEPTSALTETEVAHLFTIIRDLREQGKAIIYISHKMDEIFNITDEISIFRDGTWIASDQTSKYTRQSLITQMVGRELTQLFPKFNSAIGEEVLTVRNLTCKDRFTDVSFSVRRGEILGVAGLVGAGRSEVMESLFGMESFDSGEILIDGVPVTIDSPSTAIEKGMAFLTEDRKKSGLFLVLSVMENMSIVNMPEYSGKSGFVSHVKMAQDCMDQIRRLNIKTPTMDQIINNLSGGNQQKVLIARWLLAQPKILILDEPTRGIDVGAKAEIYRLISELANRGVAIIMVSSELPEILGMSDRVMVMHGGRITGILDKEEADQETILSLASE
>NZ_CP016889.1|WP_010247907.1|30062_30986_-|sugar-ABC-transporter-substrate-binding-protein
MNIKKTIVASLLACMLPAAVMAKDISVGVSMALFDDNFLTILRTSMQKEMQKDGVKGQVEDAKGDVSQQLQQVQNFIGQGVDALIVNPVDTNAVKPIMDQASKAGIPLIFVNRRPQAELTGKMAYVGSDSELAGRLQMEALAKAMNGKGNVAILMGDLANEATRDRTKGVEEVAAKFPGIKIVQKQTAKFTRNDAVDVVSNWMTAGDEINAIASNNDEMAIGALQALGKNPDKILIAGVDGTPDALQMLKQGKMVATVFQDAQGQGEGAVQTAIKLVNGEKVQKVINIPYQLITKENMEQFTKRNLK
>NZ_CP016889.1|WP_010247918.1|31657_31960_-|XRE-family-transcriptional-regulator
MGRTLEQLIADEKPEVVADAQAMATDILLNIHLAELREKVQKTQVEMAKALGITQPTVAGMEKPGRDLKLSTLKRYIDAAGGKLRLVVELPDGSHYGFEV
>NZ_CP016889.1|WP_069025145.1|31964_32318_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MWMIKTTERFDRWFTLLNESDRACVLAALMVLREKGPGLSRPYADTLKGSVYINMKELRIQSRGDPIRAFFAFDPNRTAIVLCAGNKVGNEKRFYREMLPVADREFTHWLNSFKDEE
>NZ_CP016889.1|WP_029519619.1|32616_33705_-|hypothetical-protein
MKSLSPRKAAVAMAVAAAFSLTACQAPAKKADAPAAEAPKPVNTAVTQRALGDGLYEMAYSPASKALFVASAQAFKDVNGGMIYRLDPATLTTKGETHTDMKNFGTAIDENGQVFYTTNSLDGAISKVDAQSGKVLQRLVFPGKISKEGYPAGAREVLWHGNELYVGRVAEPGYISVVDTRTFKLKTEIKNAGKWVTGIIYSPLTERIYAANGSGEILVINPRSHKIEKRWTAGDGKEYLFLNMAEDPATGRLFVTDDSKGKATLIFDERTGKVIKRIEGDAMGIKFNAKRNELYISQRESKKVLQLDATTYAVKNSWSFDKNPNSLLIGPDNNTLYVTLKAEFNKDSSTKGTDEIARIALP
>NZ_CP016889.1|WP_081325906.1|34100_36263_+|ferric-rhodotorulic-acid/ferric-coprogen-receptor-FhuE
MARSGRESGFRNSFSVSLLTLAIHALFHPAMAAEETSQDMVVSATTDETSDSGKQNYAVQATRAGTKLMLTPRDVPQSLSVVTQQRMQDQDLQSVNDVLTNATGISTNLIDSERSEYYSRGFKVSNFTFDGIPTSVNDTWNYGDAASDTAIYDRIEIVRGATGLMTGAGSPSASINMVRKHADSKTATGTLSASYGSWNKQRYVADLSAPLNSDGSLRGRVVTGYTDQESWLDRYQKTKKFIYGVIDADLTDKTTLSLGYDYEDDNTGNPTWGGLPMFYSNNATTHYDRSLNSSANWARYNTNSRKVFADIDHNFDNGWNIHINGTHAENTFSDKLLYVIGNPDQESGEGTTGYGSMDRGKRKMDSIDGFASGPFELLGRQHLLMAGASYSRQHNAAYSQDGFSDAEAGEITAADMGIFNNSWTGNVAEPEWQGWYLNDDDTVRQKSVYSAARLSLADPLSLIIGARYTQWSTHGSSGEMTKNNTTPYAGLVYDINDTWSAYGSYTAIFLPQTYRDTHGSYLSPVTGKSYETGLKSAWNDGLLTASVALFRIEQDNVGQAIDGIYLSGNEQAYNAAKGAVSKGAEFELNGALTDNLQLTFGATRYVARDKSGRFNSYQPQTSFKLFTRYQLAAIPELTVGGGVNWQNRVFKDVTNASGDSVRVYQGSYPLASLFARYQVNKQVAVQANVDNLFDREYYSYMNSYVYGEPRNVNVSVSYQF
>NZ_CP016889.1|WP_069025146.1|36390_36663_-|hypothetical-protein
MPDYCFYTHGKQIVVLERSEVNRAIDLMVQGYKKEVEEVHAINEKQATARFADIRKNNDIDRHNFLAGAGVMPLIGVLTAMAAFLFWRKK
>NZ_CP016889.1|WP_069025147.1|37335_39258_+|HAMP-domain-containing-protein
MGLAQRISDIKIGKKLGVGFIVVIAASLAITFIAFDCFRSIKDNSARRTITVEMVNMLSKARLNRTLYQYTKDPKFATQNVQALKELDALYKRLDGFKWDEMGQQKVALMGQLLNEYQNQRQTFVTAAQATSDAFDAIKPGALIALAHQFESLDMALTPDAALPVMHLAAALFDAANVEKAFLDKPTEASREAILEEYTAINTLSEQLDIFAQPNINDVTRNVLSTLAKQRQALTRYVDATEKEKSESAGLTTTAERLNAVVSDTFAYQSQLSSEFIKQAEWRIAFAALICVVLSLLIAWRITRNITLPLKETLSAAQRIAAGDLTTSLKTTRGDELGQLMQAVDAMNISLQNIITNVRDGVSSVARASAEIAAGNTDLSSRTEQQSAAVVQTAASMEELSSTVKQNAENAHHASQLATDASVNAGRGGEIIRDVIETMNNISQSSGKIGEIIHVINSISFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSSLAAKEIETLIRESLDRVHDGSEFVERAGTTMDDIVRSVSQVKDIMGEIAAASDEQNRGISQIATAMAEMDTTTQQNAALVEESSAAASSLESQADELEKTVAVFRLSPGQNSVSRGAPALSPRLVPAAPVNASADSSWESF

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Crispr_ID: NZ_CP016889_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016889_2

1598964-1599099

Orphan

Consensus_repeat	Method
CCTTTCCGATCTGACCGTGTTCCCGAAGCAGTCTCGATCTGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016889_2

>merge|NZ_CP016889|2|1598964-1599099|CRISPRCasFinder
CCTTTCCGATCTGACCGTGTTCCCGAAGCAGTCTCGATCTGACCGCTAAGCATTCACATTCTTACCGCCGAGCGTCCAGGGATGGTTTAAGCACCTTTCCGATCTGACCGTGTTCCCGAAGCAGTCTCGATCTGAC

>NZ_CP016889|2|2|1598964-1599099|CRISPRCasFinder
CCTTTCCGATCTGACCGTGTTCCCGAAGCAGTCTCGATCTGAC	CGCTAAGCATTCACATTCTTACCGCCGAGCGTCCAGGGATGGTTTAAGCA
CCTTTCCGATCTGACCGTGTTCCCGAAGCAGTCTCGATCTGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016889.1\|WP_155763583.1\|1586836_1587382_-\|MltR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236817
NZ_CP016889.1\|WP_069025578.1\|1591058_1591775_-\|DUF3053-domain-containing-protein	unknown	unknown	gnl\|CDD\|371434
NZ_CP016889.1\|WP_010257438.1\|1594345_1594642_+\|HTH-type-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182222
NZ_CP016889.1\|WP_064703249.1\|1596649_1598341_+\|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase	unknown	unknown	gnl\|CDD\|183198
NZ_CP016889.1\|WP_010671638.1\|1588691_1590626_-\|PTS-mannitol-transporter-subunit-IICBA	unknown	unknown	gnl\|CDD\|237905
NZ_CP016889.1\|WP_010671648.1\|1607771_1609883_+\|UDP-forming-cellulose-synthase-catalytic-subunit	unknown	unknown	gnl\|CDD\|274400
NZ_CP016889.1\|WP_069025583.1\|1612842_1616658_+\|cellulose-biosynthesis-protein-BcsC	unknown	unknown	gnl\|CDD\|377509
NZ_CP016889.1\|WP_039390424.1\|1595339_1595804_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP016889.1\|WP_010671644.1\|1604473_1605496_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP016889.1\|WP_010257431.1\|1595899_1596328_+\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP016889.1\|WP_039390428.1\|1599772_1601383_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173858
NZ_CP016889.1\|WP_069025581.1\|1606343_1606928_+\|cellulose-biosynthesis-protein-BcsO	unknown	unknown	gnl\|CDD\|374957
NZ_CP016889.1\|WP_069025579.1\|1592012_1593611_-\|gamma-glutamyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223482
NZ_CP016889.1\|WP_010671643.1\|1602582_1603485_+\|dipeptide-ABC-transporter-permease-DppC	unknown	unknown	gnl\|CDD\|182833
NZ_CP016889.1\|WP_022624838.1\|1606918_1607722_+\|cellulose-synthase-operon-protein-YhjQ	unknown	unknown	gnl\|CDD\|274549
NZ_CP016889.1\|WP_069025582.1\|1609879_1612831_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	unknown	unknown	gnl\|CDD\|236851
NZ_CP016889.1\|WP_010257423.1\|1603497_1604484_+\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182906
NZ_CP016889.1\|WP_039390438.1\|1617108_1618116_+\|endoglucanase	unknown	unknown	gnl\|CDD\|366548
NZ_CP016889.1\|WP_069025580.1\|1594683_1595277_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|223394
NZ_CP016889.1\|WP_069025577.1\|1587446_1588595_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031

Protein	Function_ID	Function_description	E-value
NZ_CP016889.1\|WP_155763583.1\|1586836_1587382_-\|MltR-family-transcriptional-regulator	gnl\|CDD\|236817	PRK11001, mtlR, MltR family transcriptional regulator.	2.76413e-100
NZ_CP016889.1\|WP_069025578.1\|1591058_1591775_-\|DUF3053-domain-containing-protein	gnl\|CDD\|371434	pfam11254, DUF3053, Protein of unknown function (DUF3053). Some members in this family of proteins are annotated as the membrane protein YiaF. No function is currently known.	7.11993e-96
NZ_CP016889.1\|WP_010257438.1\|1594345_1594642_+\|HTH-type-transcriptional-regulator	gnl\|CDD\|182222	PRK10072, PRK10072, HTH-type transcriptional regulator.	1.76399e-43
NZ_CP016889.1\|WP_064703249.1\|1596649_1598341_+\|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase	gnl\|CDD\|183198	PRK11560, PRK11560, kdo(2)-lipid A phosphoethanolamine 7''-transferase.	0
NZ_CP016889.1\|WP_010671638.1\|1588691_1590626_-\|PTS-mannitol-transporter-subunit-IICBA	gnl\|CDD\|237905	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional.	0
NZ_CP016889.1\|WP_010671648.1\|1607771_1609883_+\|UDP-forming-cellulose-synthase-catalytic-subunit	gnl\|CDD\|274400	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.	0
NZ_CP016889.1\|WP_069025583.1\|1612842_1616658_+\|cellulose-biosynthesis-protein-BcsC	gnl\|CDD\|377509	pfam05420, BCSC_C, Cellulose synthase operon protein C C-terminus (BCSC_C). This family contains the C-terminal regions of several bacterial cellulose synthase operon C (BCSC) proteins. BCSC is involved in cellulose synthesis although the exact function of this protein is unknown.	3.63621e-147
NZ_CP016889.1\|WP_039390424.1\|1595339_1595804_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.65641e-22
NZ_CP016889.1\|WP_010671644.1\|1604473_1605496_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	0
NZ_CP016889.1\|WP_010257431.1\|1595899_1596328_+\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	5.40344e-77
NZ_CP016889.1\|WP_039390428.1\|1599772_1601383_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173858	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an ATP-binding cassette (ABC)-type dipeptide import system. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP016889.1\|WP_069025581.1\|1606343_1606928_+\|cellulose-biosynthesis-protein-BcsO	gnl\|CDD\|374957	pfam17037, CBP_BcsO, Cellulose biosynthesis protein BcsO. This is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	1.28328e-14
NZ_CP016889.1\|WP_069025579.1\|1592012_1593611_-\|gamma-glutamyltransferase-family-protein	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
NZ_CP016889.1\|WP_010671643.1\|1602582_1603485_+\|dipeptide-ABC-transporter-permease-DppC	gnl\|CDD\|182833	PRK10913, PRK10913, dipeptide ABC transporter permease DppC.	0
NZ_CP016889.1\|WP_022624838.1\|1606918_1607722_+\|cellulose-synthase-operon-protein-YhjQ	gnl\|CDD\|274549	TIGR03371, cellulose_yhjQ, cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	3.424e-55
NZ_CP016889.1\|WP_069025582.1\|1609879_1612831_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	gnl\|CDD\|236851	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB.	0
NZ_CP016889.1\|WP_010257423.1\|1603497_1604484_+\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182906	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional.	0
NZ_CP016889.1\|WP_039390438.1\|1617108_1618116_+\|endoglucanase	gnl\|CDD\|366548	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8.	4.14153e-100
NZ_CP016889.1\|WP_069025580.1\|1594683_1595277_-\|HD-domain-containing-protein	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	5.21559e-23
NZ_CP016889.1\|WP_069025577.1\|1587446_1588595_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0

>NZ_CP016889.1|WP_064703249.1|1596649_1598341_+|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase
MNYIKTLTQQKLSLLLALYLGILLNLPIFYRRFDGFLRHSTVTNWLTAVTEVMAIVVLTFFLMRLLSLGGKWFYRVLATLIVLISVAAAYYMAFFNVVIGYGIVASVMTTDTDLSKEVIGYHFILWMVLVSALPLLMIWRNKLSMTLNEQLRTPGQRLKPTLIMLLCVALVWLPIRFFDKLQKHNEEITNIDLPSYGGVVAHSYLPSNWLAAVGLFAWTRVDESLNSQELLDPAKKFTYVAPAGLDDTYVVFVIGETTRWDHMGMLGYERDTTPKLSKEKNLVAFRGESCDTATKLSLRCMFVREGGTMDNPGRTLKEQNVFAVMKELGFTSELFAMQSEVWFYDNINANNFAFREQIGSEKRNQGKAVDDMLLVPEMKASLDRFPKGKHLIVLHTKGSHYLYSQRYPRSFAKYQPECMGVDETCSKAQLINAYDNSVLYVDSMLDSVLDQLRDKKAIVFYAADHGESISENMHLHGTPREMAPPEQFRVPMIVWASDKYLEDSQNRSNFERLQAQQRVGRTHRHVELFDTILGCLGYTSPDGGINPANNWCQAPGNGQAKPL
>NZ_CP016889.1|WP_010257431.1|1595899_1596328_+|organic-hydroperoxide-resistance-protein
MSLEQVVYRAKAKATGGRDGRATSSDGVLDVKLGVPKEMGGAGGEVTNPEQLFAAGYSACFLGAMKFVAGRDKITMPKDAWIEGEVGIGPIPDGFGIEATLNIHLPEMDEAEAQKLVDAAHIVCPYSNATRNNIDVTLNIIR
>NZ_CP016889.1|WP_039390424.1|1595339_1595804_+|MarR-family-transcriptional-regulator
MNCDQDDKKVKTMPLLVDQQLCFALYSANLAMNKVYRQLLSQLDITYPQYLVMLVLWQKDDVTVSEIGEQLFLDSATLTPLLKRLESAGLINRQRTRQDERQVAVTLTEAGQALRARAEAIPEAVKCATACDDDALLALKLQLDGLRDNLNQSR
>NZ_CP016889.1|WP_069025580.1|1594683_1595277_-|HD-domain-containing-protein
MQDSLEEQARRFATAAHASAGQRRKYTDEPYIVHPAAVVELVRSVSHDDALLAAAWLHDTVEDTATTQSDIEAHFGTRVADLVEMLTNSAPAAAKNRTARKLAHFRHTASASPEAQTIKLADIIDNTRAIVRFDPDFARVYLVEKQIQIALLKQGDAQLWQQASTIIESGLAQLREPPYSVPESWFARQAAKYSELR
>NZ_CP016889.1|WP_010257438.1|1594345_1594642_+|HTH-type-transcriptional-regulator
MELKDPMFELLSSLEQIVLTRDDRAAELLIQRQQPAQPEPQRLREMTGMQVDEFAKVMGVSVSSVKSWEARRTRPSATAQKLMKLLHANPYLGRQLLE
>NZ_CP016889.1|WP_069025579.1|1592012_1593611_-|gamma-glutamyltransferase-family-protein
MRETDFNVGYPSHRVPMMGRNAVATSQPLAAQAGLRMLQQGGNAVDAAIATAIALTVLEPTGNGIGSDAFAIVWDGSELHGLNASGRSPAAWHSERFADFSAMPETGWESVTVPGAVSAWVTLAQRFGTLPLTTLAQPAIDYARDGFPVSPLIGQLWQRGYDKLRDQPGFSDCFAPQGRPPRAGELFRNPAQARTLQEIAETQGESFYRGALAQKMAAFAREHGAALTLEDLKNHRADWVTLLSRPFAGGSVQELPPNGQGIATLIALGILEPWEINRYAPDSPQWLHLSIEAMKLALVDLDRYVTDEDHLEFPAEHLLSNDYIRQRAALIDPDKAGDFRFGSPQQSGTVYVAAGDASGMMVSFIQSNYMGFGSGVVVPDTGISLQNRGAGFSLDPDHPNVVASGKRPFHTIIPAFARDQQGQPLMAFGVMGGPMQAQGHLQLALRIMLHQQNPQAAIDAPRWRVVQGREVVFESTLDRNTLSTLRRMGHNVVLEDPLSNYNFGGAQAIVRDPQGFYIAASESRKDGQAVVF
>NZ_CP016889.1|WP_069025578.1|1591058_1591775_-|DUF3053-domain-containing-protein
MASGLTRLMARGGIMLAGALIVLQLTACGDKEGEQRKAFIDFLQNTVMRSGEHLPSLSENQKQSFGNFASDYAIMYGFSQQANKAVEQGMRPVVDELSAIRVPQDYLSRRDSLRQATSALVIVTQQIESAKMQADSSKATLKQPDDLKKVYDTAYNKVVTVPANQLIPLLPKLQALSQGAVQTGDFLQTQGTRVSFNDGGVQFPTQEQASQYNALMSTLSANSQALPQAQAAVQGGLQ
>NZ_CP016889.1|WP_010671638.1|1588691_1590626_-|PTS-mannitol-transporter-subunit-IICBA
MSSSVKVKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWIPNETLAKLVGPMITYLLPLLIGFTGGRLVGGDRGGVVGAITTMGVIVGADMPMFLGAMIAGPLGGWAIKSFDRAIDGKIKSGFEMLVNNFSAGIIGMILALLAFLAIGPLVEGLSHILAAGVNLMVQNNLLPLTSIFVEPAKILFLNNAINHGIFSPLGIQQASEAGKSIFFLIEANPGPGMGVLMAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMAPRLLLAVILGGMTGVFTLTVLNGGLVSPASPGSILAVLAMTPKGAYFANIAAIAAAFAVSFVVSAILLKTSKVKEDDDIEAATQRMHEMKAQSKGQSGAGAPVASDAMSVELHHVRKIIVACDAGMGSSAMGAGVLRKKVQDAGLSNVSVTNTAINALPGDVDLVITHRDLTERAIRQAPHAQHISLNNFLDSALYSTLTERLVAANRSDVHRQTVNTALSDSYDEGNAHLFKLGADNVFLGLTASNKEQAIRFAGEQLVKGGYVEPEYVEAMLAREKLTPTYLGESIAVPHGTVEAKDRVLKTGVVFCQYPAGVLFGEEPEDVARLVIGIAARNNEHIQVITSLTNALDDDSVIEKLANTTSVQEVLDLLSGKPAIA
>NZ_CP016889.1|WP_069025577.1|1587446_1588595_-|mannitol-1-phosphate-5-dehydrogenase
MKALHFGAGNIGRGFIGKLLADAGIELVFADVNQTVLDALNARHEYPVHVVGEQARTETVKGVSAVNSTSDEIITLVSEVDLVTTAVGPQILERIAGSVAKGLAKRSDNGNTRPLNIIACENMVRGTSQLKQHVLKALPEQYHAWLEQHVGFVDSAVDRIVPPSEAGSTDPLEVTVETFSEWIVDKTQFKGDLPAIPGMELTDNLMAFVERKLFTLNTGHAITAYLGQLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFEADKHAAYIQKILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPTLGTLEYGLPHASLVQGIAAAMHYRSDQDPQAQELATLLAEKGPQATLAEVSGLDADSEVVASVVSAWHAMA
>NZ_CP016889.1|WP_155763583.1|1586836_1587382_-|MltR-family-transcriptional-regulator
MQAIMEEKQAFENRVLERLNAGRSVRSFLIAAVELLAEAVNLLVLQVFRKDDYAVKYAVEPLLLGNGPLGELSVRLKLIYGLGVISRHEYEDGELLLALREELNHDSGDYRFTDDEILGPFGELHCVTAWPPTPVFHTEDAELRSMQQQRYLQMVRSTMVLSLTELIARISMKQAFKKSGS
>NZ_CP016889.1|WP_039390428.1|1599772_1601383_+|ABC-transporter-substrate-binding-protein
MINSLAKSGMLKVGLSLIAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSRQIYNRLVEFTIGTTELHAALAEKWDVSEDGKTYTFHLRKGVKWQTTKDFKPTRDFNADDVVFTFERQLDKNNAYHGVSGGSYEYFEGMDMPKLISKIEKVDENTVRFVLTRPESPFLADLGMDFASILSKEYADNMLKAGTPQNVDLNPVGTGPFQLLQYQKDSRILYKANPDYWGTKPKIDRLVFSITPDASVRYAKLQKGECQVMPYPNPADIARMKQDKNINLYEQAGLNVGYLSYNVEKKPLDNLKVRQALTMAVNKKAIIEAVYQGAGQPAKNLIPPTMWGYNDDVKDYAYDPEKAKALLKEAGMADGFSIDLWAMPVQRPYNPNARRMAEMIQSDWAKIGVKAKIVTYEWGEYLKRAKAGEHQTVMMGWTGDNGDPDNFLATLFSCSAAKDGSNYSRWCDKSFEDQIQPARATADQAKRIEYYKQAQVVMHDQVPALMIAHSTVYEPVSKKVSGYKVDPLGGHYFAQVDIKE
>NZ_CP016889.1|WP_010671643.1|1602582_1603485_+|dipeptide-ABC-transporter-permease-DppC
MSVVDPGSVTVAPKPMTPFQEFWHYFKRNKGAVVGLVYIIIVLLCAIFADVLAPHAPAEQFRDALLHPPVWQEGGSWSYILGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIFGVIFGLLAGYLGGVVDAIIMRVVDIMLALPSLLLALVLVAIFGPSIVNASIALTFVALPHYIRLTRAAVLVEVNRDYVTASGVAGAGMLRQMFVNILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQYAQSAWWVVTFPGLVILLTVLAFNLMGDGLRDALDPKLKQ
>NZ_CP016889.1|WP_010257423.1|1603497_1604484_+|dipeptide-ABC-transporter-ATP-binding-protein
MALLNVDKLSVHFGDDKAPFRAVDRISYQVEQGQVVGIVGESGSGKSVSSLAIMGLIDFPGKVMAEKLEFNQRDLQNISERERRQLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKRTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQRQENMALILITHDLALVAEAAHHIIVMYAGQVVESGKATDIFKAPRHPYTQALLRALPEFAADKARLASLPGVVPGKYDRPIGCLLNPRCPYATDLCRQEEPELRTIPGRQSKCHYPLDDAGRPTYES
>NZ_CP016889.1|WP_010671644.1|1604473_1605496_+|ABC-transporter-ATP-binding-protein
MSHETTKDQFLLQAIDLKKHYPVKKGLFGQERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIETPTEGQLYWHGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVSQILEEPLVINTQLTRAERREKTLEMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVLIADEPVSALDVSVRAQVLNLMMDLQQDMGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGSKEAIFANPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCHRRFGTCVQLQPKLKNYGGQEIACFAVDQDENQPVGVAEKVS
>NZ_CP016889.1|WP_069025581.1|1606343_1606928_+|cellulose-biosynthesis-protein-BcsO
MKNNYDDLQRFKEKTQTLDIDFKDMSGQTQEAAEHSKWALIRQLAKEEHQTPFGGGERIDLPQPQPLRGDEFTAPPPGATARHAALTAQPAMAARTSILDSLSGSNLPATSTTARGPSSLFPPPLQKAAVAEPATPLRAEPVRPATVAELQPVVAPTATHSEPGRFGALFRSREINLPKETLLKPLLEKIALCH
>NZ_CP016889.1|WP_022624838.1|1606918_1607722_+|cellulose-synthase-operon-protein-YhjQ
MPLVCVCSPKGGVGKTTLAANLAWSLARSGSKVLAIDFDVQNALRLHFGVPLHDGRGFVARSEEQADWSQSILTTGGNIFVLPYGDVTEPQRERFEENLMKDPHFIKRGLDTVLNYPGLVIVADFPPGPGPALKAMTTLADMHLVVMLADTASVSLLPQIEENRMIGKPLNNKQGHYFILNQCDNRRNINRDVTAFMQQRLGDNLLGVVHRDESVGEANASQQSVYDFSPASAAAFDIELIAKRVSSILNITVGNGEVQAPIRTNHF
>NZ_CP016889.1|WP_010671648.1|1607771_1609883_+|UDP-forming-cellulose-synthase-catalytic-subunit
MSKIGFYLLLLVLAPVAAVIIITPMDSQKQYIFGLISIGMMFLLGFSKSRKITVVMVVLSALMSSRYIWWRTTETLHFNSEVEAILGIGLYLAELYVWLILILGFLQTTWPLKRTIEPLPDDTSLWPTVDIYVPSYNESLDVVRDTVLAAQCIDYPRDKIRVYLLDDGKRSEFARFAADVGVGYITRDDNKHAKAGNLNHAMKITKGELICIFDCDHVATRTFLQATVGPFLKDPKLALLQTPHYFYSPDPFERNLRAARSIPNEGSLFYGPVQQGNDNWNATFFCGSCAVIRRSALEEIGGFAVETVTEDAHTALKMQRLGWGSAFLSIPLAAGLATERLGLHIIQRTRWARGMTQIFRVDNPLFGRGLKWQQRLCYLNAMLHFQFGLPRVAFLTAPLAYLLFNLNIIHSSASLIFAYVLPHLVMSLYVNSRMNGRFRYTFWGEIYETVMCFHLVIPTILTLLSPKHGKFNVTDKGGVLDQGFFDFHIVRPHVIVALLLGIGIVAGVVRAVMHDYFGVDPYVIALNVGWAIFSLIILMAAIAVARETKQVRKTIRVEVQIPAIIHYASGISSRTQTSNLSMGGAQLDAPDGRHETDEIEEIDLLLKSGAITIPVSQISGDDESIRLRFEAMPLARRRELVRVVLARADAWIQPEYKQDNPLISLGTIIRTVFELFWLTWKGRHDKRKNVDPVAAAAKEDGAA
>NZ_CP016889.1|WP_069025582.1|1609879_1612831_+|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB
MKILTQTLLVSSLTAALWLTPAGAETPVASDNNSAAPLNSSAPTLPDAASSTQPASAPVNSPAPMPSDAASSTQPADATVIAPATNQAPASDAASVAPMNNGSTQTAGSDQVPVPVSGGESAMPSVSPAANAPSATPSAESAPASALQSASPNAMAPPVNASYAPGSEATSQTQPSSVTGDATSTPQTASSTGEAAASAQTTAPMAATGAVTQDSSALSAVPLPQGLSSADPALEAAASALPYAPGQVAAPVAEAQPPIAAAINQPISSVISVAQMGQSRGITLTGGQLQSGITFTLPGDEVITNARLNLTLRVSAALAARNTSLQLMLNGQPLGTLPLGATDSDVSDYELDIPAAMVVSANNLSFKINDADKLLCERESAQQYQVTILPNTSLHLEGQKLNIGTSLRNFPRPFLDPQRMTASTVTVGFASHVSADAVSAAALVTSWLGIQSDYRGIRFPVVRGKLPEHNGILFGHPGDRIGTLTFPASNGPMLQVVDNPNNPVYKLLLVIGNNEEQLLQAANRLTTQPLTTDESQLQVPEQTIANRKPYDAPRWINTDRPVRLSELLRKDQSLTSSGIWHDALRVNFRAAPDLFLWDGDTVPVNLHYRFPSESWIDEDNSFLNVMLNGTFLRNLTVNKVGLLENAWHRLGGDARQEQYQLNLEPYLIYGDNQLALYFNIKPRADAPCGVLLNNNIKSRIEEDSWIDLSHTRHFSMLPNLSYFVGASFPFSRLADFSQTTLLLPETPSDAELSTLLDLAARAGKATGLALTHNQVLFGLPTGGTHLARIQQSDLLAVSTTGNSAFNQAMLAASPYDATGSTFGVKEPDTLEKLRGWLTGDWSRQQLDADRYFSSNEAWRGFLSYRSPWNRDRLVVMTVATSDDQLLRLHNDLSSAQINAGIRGDTAIITDENGIRSFRVGAQFPSGELPWYMMVVWYANQHSVLLAVAAMLLSALVGSAAWVMLKRHAWRRLNPKQGRDSGRK
>NZ_CP016889.1|WP_069025583.1|1612842_1616658_+|cellulose-biosynthesis-protein-BcsC
MKKNLLSAGIRKALLLGSALALSQPLLAAESANPALQALFDQASYWHQKAHDDLATASLQKVLMVEPNNTQALYLLALYSQQGGDTAAAAQYRALLSQVSPNDPHLGELDNARQMQTIPQAQLALARQQARSGNIPAALQTWRNTFSGNAPPPSVAAEYYLTMAGDRTLLPQAVEALRQFAAQHPQDTGARLALGKALTYQEPTRREGIEVLSSLASGNQDADRSLRQALLWLGPQPSDAALYQTWQQRHPQDSAVIDYYRKNVGGAEKGAGFSALNSGDVGGAQSSFEKVLGANPQDADALAGMGYVAQRAGRYQEAADYLQRSAQLGGDQGSSRQQQADDARFYAQLASAQQALKSGDTAQALTLSEPLVQADGEKGLAARLFRADVLRRTNQPQQAEQLYRTILQSDADNRSAKEGLFYVLRQQNRGAEASTLLGALPDSVRQSVTPRANEADALRQQAKRQLAAGNNAAAIATLQQGIQRYPTDGWLRLDLARLYRQQGDTLLAANVMQPVMRNGASTSELYAGALNASESGGWQQASTLLSRIPANAKTAAMRELAQRVNFNLQMSTADQYLAQGATAAAANTLKALTVNPPTNPVDAGNLAQKLAQAGDLTSAVSVVRTNLQRGVQGNAGDYAAQMTVLNQAGLGSEAQRFLSNPELQARSTPTQLAGIRNGYLINEVDRLRQQRQYAVAYDKLIGALQQDPQNRDLMFAMARLYQDGKMNRDAGVVYDYLMTQDTPTQDARVGAINVALAQNNVQRANELSRGLNSTTQTPDRLLLLARVAEANGEHSQAMTYLRSARGQLIGLQGAQPGSVPTVGGLALADNPFINRDTSPVGRSPSSYGTVLPWQAAPASVAAGVTTQGEPAAGSETVSRQSQILHDVDTMMDSLQEKTGSWSQGMVQVRGRDGESGLSKLTEAKAPLTFSTVPFETARLDFTATPVSLTAGSGAADAWRRFGTNALSQGRVVAAGGATVNDLPNATTDSQTASGVELNLALKGDSYKVDIGSTPLGQDLSTLVGGVQWSPKLTDFLTLILTGERRAITDSLLSYVGAEDKTSGKRWGRVTKNGANALLSYDNGDAGFYAGAGAYSYLGENVASNNNLQATAGAYVRPFHTDDRELKVGMSLSWMDFSKNLSYFSYGQGGYFSPQNYASVSFPIEFSRKFDDLKVNIGGAAGYQTYSQDKSAYFPSDASLQSELESLAASGSVKDAYYSGGSKNGIGYNLHAGADYKLNKDVTIGGQLGYDTFGDYNESSAQLYVRYLFGEK
>NZ_CP016889.1|WP_039390438.1|1617108_1618116_+|endoglucanase
MKRNPLWRVWLCSVLLLACSAQASASGWETFKSRFVTSEGRITDTANNNVSHTEGQGYGMLLAVANDDRATFDRLWQWTRSQLRNPQTGLFYWRYVPGSDNPVADKNNASDGDVLLAWALQRAAQKWQVDSYQQESDRIQRAIIRLDVTSFGGHTVMLPGAQGFNKVSYVVLNPSYFLFQAWREFGEHSHLQVWDKLINDGFDLLGKLSFGKTGLPMDWVALNADGSVAPAVGYSNRFSYDAIRVPLNIWWYDPHSLALVPFQRVWQGYSRMLTPAWFDVLANAPAPYHLEGGLLAVRDLTLNETGYLSDKLAADQNYFSASLQLLTWQAFQEKR

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Crispr_ID: NZ_CP016889_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016889_3

1605622-1605741

Orphan

Consensus_repeat	Method
CGTTGGCCCGGCTACGGGCACACCTCAGGGATGAGGTGCGTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016889_3

>merge|NZ_CP016889|3|1605622-1605741|CRISPRCasFinder
CGTTGGCCCGGCTACGGGCACACCTCAGGGATGAGGTGCGTACTAAAAACGCCGGGAGCGTTTTTGAACAACGCAACGCGTTGGCCCGGCTACGGGCACACCTCAGGGATGAGGTGCGTA

>NZ_CP016889|3|3|1605622-1605741|CRISPRCasFinder
CGTTGGCCCGGCTACGGGCACACCTCAGGGATGAGGTGCGTA	CTAAAAACGCCGGGAGCGTTTTTGAACAACGCAACG
CGTTGGCCCGGCTACGGGCACACCTCAGGGATGAGGTGCGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016889.1\|WP_069025586.1\|1621834_1622032_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371309
NZ_CP016889.1\|WP_010257438.1\|1594345_1594642_+\|HTH-type-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182222
NZ_CP016889.1\|WP_064703249.1\|1596649_1598341_+\|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase	unknown	unknown	gnl\|CDD\|183198
NZ_CP016889.1\|WP_069025584.1\|1618249_1619911_-\|cellulose-biosynthesis-protein-BcsG	unknown	unknown	gnl\|CDD\|371656
NZ_CP016889.1\|WP_069025585.1\|1620098_1621634_-\|cellulose-biosynthesis-protein-BcsE	unknown	unknown	gnl\|CDD\|371330
NZ_CP016889.1\|WP_010671648.1\|1607771_1609883_+\|UDP-forming-cellulose-synthase-catalytic-subunit	unknown	unknown	gnl\|CDD\|274400
NZ_CP016889.1\|WP_069025583.1\|1612842_1616658_+\|cellulose-biosynthesis-protein-BcsC	unknown	unknown	gnl\|CDD\|377509
NZ_CP016889.1\|WP_039390424.1\|1595339_1595804_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP016889.1\|WP_010671644.1\|1604473_1605496_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP016889.1\|WP_010257431.1\|1595899_1596328_+\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP016889.1\|WP_039390428.1\|1599772_1601383_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173858
NZ_CP016889.1\|WP_069025581.1\|1606343_1606928_+\|cellulose-biosynthesis-protein-BcsO	unknown	unknown	gnl\|CDD\|374957
NZ_CP016889.1\|WP_069025579.1\|1592012_1593611_-\|gamma-glutamyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223482
NZ_CP016889.1\|WP_010671643.1\|1602582_1603485_+\|dipeptide-ABC-transporter-permease-DppC	unknown	unknown	gnl\|CDD\|182833
NZ_CP016889.1\|WP_022624838.1\|1606918_1607722_+\|cellulose-synthase-operon-protein-YhjQ	unknown	unknown	gnl\|CDD\|274549
NZ_CP016889.1\|WP_069025582.1\|1609879_1612831_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	unknown	unknown	gnl\|CDD\|236851
NZ_CP016889.1\|WP_010257423.1\|1603497_1604484_+\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182906
NZ_CP016889.1\|WP_039390438.1\|1617108_1618116_+\|endoglucanase	unknown	unknown	gnl\|CDD\|366548
NZ_CP016889.1\|WP_039390442.1\|1619910_1620099_-\|cellulose-biosynthesis-protein-BcsF	unknown	unknown	gnl\|CDD\|371386
NZ_CP016889.1\|WP_069025580.1\|1594683_1595277_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|223394

Protein	Function_ID	Function_description	E-value
NZ_CP016889.1\|WP_069025586.1\|1621834_1622032_+\|hypothetical-protein	gnl\|CDD\|371309	pfam10945, CBP_BcsR, Cellulose biosynthesis protein BcsR. CBP_BcsR is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation).	1.30894e-14
NZ_CP016889.1\|WP_010257438.1\|1594345_1594642_+\|HTH-type-transcriptional-regulator	gnl\|CDD\|182222	PRK10072, PRK10072, HTH-type transcriptional regulator.	1.76399e-43
NZ_CP016889.1\|WP_064703249.1\|1596649_1598341_+\|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase	gnl\|CDD\|183198	PRK11560, PRK11560, kdo(2)-lipid A phosphoethanolamine 7''-transferase.	0
NZ_CP016889.1\|WP_069025584.1\|1618249_1619911_-\|cellulose-biosynthesis-protein-BcsG	gnl\|CDD\|371656	pfam11658, CBP_BcsG, Cellulose biosynthesis protein BcsG. CBP_BcsG is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	0
NZ_CP016889.1\|WP_069025585.1\|1620098_1621634_-\|cellulose-biosynthesis-protein-BcsE	gnl\|CDD\|371330	pfam10995, CBP_GIL, GGDEF I-site like or GIL domain. The GIL domain, for GGDEF I-site like domain, is a c-di-GMP binding domain on the BcsE proteins of enterobacteria. It is not essentail for cellulose synthesis but is critical for maximal cellulose production. Cellulose production in enterobacteria is controlled by a two-tiered c-di-GMP-dependent system involving BcsE and the PilZ domain containing glycosyltransferase BcsA.	0
NZ_CP016889.1\|WP_010671648.1\|1607771_1609883_+\|UDP-forming-cellulose-synthase-catalytic-subunit	gnl\|CDD\|274400	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.	0
NZ_CP016889.1\|WP_069025583.1\|1612842_1616658_+\|cellulose-biosynthesis-protein-BcsC	gnl\|CDD\|377509	pfam05420, BCSC_C, Cellulose synthase operon protein C C-terminus (BCSC_C). This family contains the C-terminal regions of several bacterial cellulose synthase operon C (BCSC) proteins. BCSC is involved in cellulose synthesis although the exact function of this protein is unknown.	3.63621e-147
NZ_CP016889.1\|WP_039390424.1\|1595339_1595804_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.65641e-22
NZ_CP016889.1\|WP_010671644.1\|1604473_1605496_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	0
NZ_CP016889.1\|WP_010257431.1\|1595899_1596328_+\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	5.40344e-77
NZ_CP016889.1\|WP_039390428.1\|1599772_1601383_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173858	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an ATP-binding cassette (ABC)-type dipeptide import system. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP016889.1\|WP_069025581.1\|1606343_1606928_+\|cellulose-biosynthesis-protein-BcsO	gnl\|CDD\|374957	pfam17037, CBP_BcsO, Cellulose biosynthesis protein BcsO. This is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	1.28328e-14
NZ_CP016889.1\|WP_069025579.1\|1592012_1593611_-\|gamma-glutamyltransferase-family-protein	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
NZ_CP016889.1\|WP_010671643.1\|1602582_1603485_+\|dipeptide-ABC-transporter-permease-DppC	gnl\|CDD\|182833	PRK10913, PRK10913, dipeptide ABC transporter permease DppC.	0
NZ_CP016889.1\|WP_022624838.1\|1606918_1607722_+\|cellulose-synthase-operon-protein-YhjQ	gnl\|CDD\|274549	TIGR03371, cellulose_yhjQ, cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	3.424e-55
NZ_CP016889.1\|WP_069025582.1\|1609879_1612831_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	gnl\|CDD\|236851	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB.	0
NZ_CP016889.1\|WP_010257423.1\|1603497_1604484_+\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182906	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional.	0
NZ_CP016889.1\|WP_039390438.1\|1617108_1618116_+\|endoglucanase	gnl\|CDD\|366548	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8.	4.14153e-100
NZ_CP016889.1\|WP_039390442.1\|1619910_1620099_-\|cellulose-biosynthesis-protein-BcsF	gnl\|CDD\|371386	pfam11120, CBP_BcsF, Cellulose biosynthesis protein BcsF. CBP_BcsF is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	3.16799e-16
NZ_CP016889.1\|WP_069025580.1\|1594683_1595277_-\|HD-domain-containing-protein	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	5.21559e-23

>NZ_CP016889.1|WP_010671644.1|1604473_1605496_+|ABC-transporter-ATP-binding-protein
MSHETTKDQFLLQAIDLKKHYPVKKGLFGQERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIETPTEGQLYWHGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVSQILEEPLVINTQLTRAERREKTLEMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVLIADEPVSALDVSVRAQVLNLMMDLQQDMGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGSKEAIFANPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCHRRFGTCVQLQPKLKNYGGQEIACFAVDQDENQPVGVAEKVS
>NZ_CP016889.1|WP_010257423.1|1603497_1604484_+|dipeptide-ABC-transporter-ATP-binding-protein
MALLNVDKLSVHFGDDKAPFRAVDRISYQVEQGQVVGIVGESGSGKSVSSLAIMGLIDFPGKVMAEKLEFNQRDLQNISERERRQLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKRTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQRQENMALILITHDLALVAEAAHHIIVMYAGQVVESGKATDIFKAPRHPYTQALLRALPEFAADKARLASLPGVVPGKYDRPIGCLLNPRCPYATDLCRQEEPELRTIPGRQSKCHYPLDDAGRPTYES
>NZ_CP016889.1|WP_010671643.1|1602582_1603485_+|dipeptide-ABC-transporter-permease-DppC
MSVVDPGSVTVAPKPMTPFQEFWHYFKRNKGAVVGLVYIIIVLLCAIFADVLAPHAPAEQFRDALLHPPVWQEGGSWSYILGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIFGVIFGLLAGYLGGVVDAIIMRVVDIMLALPSLLLALVLVAIFGPSIVNASIALTFVALPHYIRLTRAAVLVEVNRDYVTASGVAGAGMLRQMFVNILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQYAQSAWWVVTFPGLVILLTVLAFNLMGDGLRDALDPKLKQ
>NZ_CP016889.1|WP_039390428.1|1599772_1601383_+|ABC-transporter-substrate-binding-protein
MINSLAKSGMLKVGLSLIAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSRQIYNRLVEFTIGTTELHAALAEKWDVSEDGKTYTFHLRKGVKWQTTKDFKPTRDFNADDVVFTFERQLDKNNAYHGVSGGSYEYFEGMDMPKLISKIEKVDENTVRFVLTRPESPFLADLGMDFASILSKEYADNMLKAGTPQNVDLNPVGTGPFQLLQYQKDSRILYKANPDYWGTKPKIDRLVFSITPDASVRYAKLQKGECQVMPYPNPADIARMKQDKNINLYEQAGLNVGYLSYNVEKKPLDNLKVRQALTMAVNKKAIIEAVYQGAGQPAKNLIPPTMWGYNDDVKDYAYDPEKAKALLKEAGMADGFSIDLWAMPVQRPYNPNARRMAEMIQSDWAKIGVKAKIVTYEWGEYLKRAKAGEHQTVMMGWTGDNGDPDNFLATLFSCSAAKDGSNYSRWCDKSFEDQIQPARATADQAKRIEYYKQAQVVMHDQVPALMIAHSTVYEPVSKKVSGYKVDPLGGHYFAQVDIKE
>NZ_CP016889.1|WP_064703249.1|1596649_1598341_+|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase
MNYIKTLTQQKLSLLLALYLGILLNLPIFYRRFDGFLRHSTVTNWLTAVTEVMAIVVLTFFLMRLLSLGGKWFYRVLATLIVLISVAAAYYMAFFNVVIGYGIVASVMTTDTDLSKEVIGYHFILWMVLVSALPLLMIWRNKLSMTLNEQLRTPGQRLKPTLIMLLCVALVWLPIRFFDKLQKHNEEITNIDLPSYGGVVAHSYLPSNWLAAVGLFAWTRVDESLNSQELLDPAKKFTYVAPAGLDDTYVVFVIGETTRWDHMGMLGYERDTTPKLSKEKNLVAFRGESCDTATKLSLRCMFVREGGTMDNPGRTLKEQNVFAVMKELGFTSELFAMQSEVWFYDNINANNFAFREQIGSEKRNQGKAVDDMLLVPEMKASLDRFPKGKHLIVLHTKGSHYLYSQRYPRSFAKYQPECMGVDETCSKAQLINAYDNSVLYVDSMLDSVLDQLRDKKAIVFYAADHGESISENMHLHGTPREMAPPEQFRVPMIVWASDKYLEDSQNRSNFERLQAQQRVGRTHRHVELFDTILGCLGYTSPDGGINPANNWCQAPGNGQAKPL
>NZ_CP016889.1|WP_010257431.1|1595899_1596328_+|organic-hydroperoxide-resistance-protein
MSLEQVVYRAKAKATGGRDGRATSSDGVLDVKLGVPKEMGGAGGEVTNPEQLFAAGYSACFLGAMKFVAGRDKITMPKDAWIEGEVGIGPIPDGFGIEATLNIHLPEMDEAEAQKLVDAAHIVCPYSNATRNNIDVTLNIIR
>NZ_CP016889.1|WP_039390424.1|1595339_1595804_+|MarR-family-transcriptional-regulator
MNCDQDDKKVKTMPLLVDQQLCFALYSANLAMNKVYRQLLSQLDITYPQYLVMLVLWQKDDVTVSEIGEQLFLDSATLTPLLKRLESAGLINRQRTRQDERQVAVTLTEAGQALRARAEAIPEAVKCATACDDDALLALKLQLDGLRDNLNQSR
>NZ_CP016889.1|WP_069025580.1|1594683_1595277_-|HD-domain-containing-protein
MQDSLEEQARRFATAAHASAGQRRKYTDEPYIVHPAAVVELVRSVSHDDALLAAAWLHDTVEDTATTQSDIEAHFGTRVADLVEMLTNSAPAAAKNRTARKLAHFRHTASASPEAQTIKLADIIDNTRAIVRFDPDFARVYLVEKQIQIALLKQGDAQLWQQASTIIESGLAQLREPPYSVPESWFARQAAKYSELR
>NZ_CP016889.1|WP_010257438.1|1594345_1594642_+|HTH-type-transcriptional-regulator
MELKDPMFELLSSLEQIVLTRDDRAAELLIQRQQPAQPEPQRLREMTGMQVDEFAKVMGVSVSSVKSWEARRTRPSATAQKLMKLLHANPYLGRQLLE
>NZ_CP016889.1|WP_069025579.1|1592012_1593611_-|gamma-glutamyltransferase-family-protein
MRETDFNVGYPSHRVPMMGRNAVATSQPLAAQAGLRMLQQGGNAVDAAIATAIALTVLEPTGNGIGSDAFAIVWDGSELHGLNASGRSPAAWHSERFADFSAMPETGWESVTVPGAVSAWVTLAQRFGTLPLTTLAQPAIDYARDGFPVSPLIGQLWQRGYDKLRDQPGFSDCFAPQGRPPRAGELFRNPAQARTLQEIAETQGESFYRGALAQKMAAFAREHGAALTLEDLKNHRADWVTLLSRPFAGGSVQELPPNGQGIATLIALGILEPWEINRYAPDSPQWLHLSIEAMKLALVDLDRYVTDEDHLEFPAEHLLSNDYIRQRAALIDPDKAGDFRFGSPQQSGTVYVAAGDASGMMVSFIQSNYMGFGSGVVVPDTGISLQNRGAGFSLDPDHPNVVASGKRPFHTIIPAFARDQQGQPLMAFGVMGGPMQAQGHLQLALRIMLHQQNPQAAIDAPRWRVVQGREVVFESTLDRNTLSTLRRMGHNVVLEDPLSNYNFGGAQAIVRDPQGFYIAASESRKDGQAVVF
>NZ_CP016889.1|WP_069025581.1|1606343_1606928_+|cellulose-biosynthesis-protein-BcsO
MKNNYDDLQRFKEKTQTLDIDFKDMSGQTQEAAEHSKWALIRQLAKEEHQTPFGGGERIDLPQPQPLRGDEFTAPPPGATARHAALTAQPAMAARTSILDSLSGSNLPATSTTARGPSSLFPPPLQKAAVAEPATPLRAEPVRPATVAELQPVVAPTATHSEPGRFGALFRSREINLPKETLLKPLLEKIALCH
>NZ_CP016889.1|WP_022624838.1|1606918_1607722_+|cellulose-synthase-operon-protein-YhjQ
MPLVCVCSPKGGVGKTTLAANLAWSLARSGSKVLAIDFDVQNALRLHFGVPLHDGRGFVARSEEQADWSQSILTTGGNIFVLPYGDVTEPQRERFEENLMKDPHFIKRGLDTVLNYPGLVIVADFPPGPGPALKAMTTLADMHLVVMLADTASVSLLPQIEENRMIGKPLNNKQGHYFILNQCDNRRNINRDVTAFMQQRLGDNLLGVVHRDESVGEANASQQSVYDFSPASAAAFDIELIAKRVSSILNITVGNGEVQAPIRTNHF
>NZ_CP016889.1|WP_010671648.1|1607771_1609883_+|UDP-forming-cellulose-synthase-catalytic-subunit
MSKIGFYLLLLVLAPVAAVIIITPMDSQKQYIFGLISIGMMFLLGFSKSRKITVVMVVLSALMSSRYIWWRTTETLHFNSEVEAILGIGLYLAELYVWLILILGFLQTTWPLKRTIEPLPDDTSLWPTVDIYVPSYNESLDVVRDTVLAAQCIDYPRDKIRVYLLDDGKRSEFARFAADVGVGYITRDDNKHAKAGNLNHAMKITKGELICIFDCDHVATRTFLQATVGPFLKDPKLALLQTPHYFYSPDPFERNLRAARSIPNEGSLFYGPVQQGNDNWNATFFCGSCAVIRRSALEEIGGFAVETVTEDAHTALKMQRLGWGSAFLSIPLAAGLATERLGLHIIQRTRWARGMTQIFRVDNPLFGRGLKWQQRLCYLNAMLHFQFGLPRVAFLTAPLAYLLFNLNIIHSSASLIFAYVLPHLVMSLYVNSRMNGRFRYTFWGEIYETVMCFHLVIPTILTLLSPKHGKFNVTDKGGVLDQGFFDFHIVRPHVIVALLLGIGIVAGVVRAVMHDYFGVDPYVIALNVGWAIFSLIILMAAIAVARETKQVRKTIRVEVQIPAIIHYASGISSRTQTSNLSMGGAQLDAPDGRHETDEIEEIDLLLKSGAITIPVSQISGDDESIRLRFEAMPLARRRELVRVVLARADAWIQPEYKQDNPLISLGTIIRTVFELFWLTWKGRHDKRKNVDPVAAAAKEDGAA
>NZ_CP016889.1|WP_069025582.1|1609879_1612831_+|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB
MKILTQTLLVSSLTAALWLTPAGAETPVASDNNSAAPLNSSAPTLPDAASSTQPASAPVNSPAPMPSDAASSTQPADATVIAPATNQAPASDAASVAPMNNGSTQTAGSDQVPVPVSGGESAMPSVSPAANAPSATPSAESAPASALQSASPNAMAPPVNASYAPGSEATSQTQPSSVTGDATSTPQTASSTGEAAASAQTTAPMAATGAVTQDSSALSAVPLPQGLSSADPALEAAASALPYAPGQVAAPVAEAQPPIAAAINQPISSVISVAQMGQSRGITLTGGQLQSGITFTLPGDEVITNARLNLTLRVSAALAARNTSLQLMLNGQPLGTLPLGATDSDVSDYELDIPAAMVVSANNLSFKINDADKLLCERESAQQYQVTILPNTSLHLEGQKLNIGTSLRNFPRPFLDPQRMTASTVTVGFASHVSADAVSAAALVTSWLGIQSDYRGIRFPVVRGKLPEHNGILFGHPGDRIGTLTFPASNGPMLQVVDNPNNPVYKLLLVIGNNEEQLLQAANRLTTQPLTTDESQLQVPEQTIANRKPYDAPRWINTDRPVRLSELLRKDQSLTSSGIWHDALRVNFRAAPDLFLWDGDTVPVNLHYRFPSESWIDEDNSFLNVMLNGTFLRNLTVNKVGLLENAWHRLGGDARQEQYQLNLEPYLIYGDNQLALYFNIKPRADAPCGVLLNNNIKSRIEEDSWIDLSHTRHFSMLPNLSYFVGASFPFSRLADFSQTTLLLPETPSDAELSTLLDLAARAGKATGLALTHNQVLFGLPTGGTHLARIQQSDLLAVSTTGNSAFNQAMLAASPYDATGSTFGVKEPDTLEKLRGWLTGDWSRQQLDADRYFSSNEAWRGFLSYRSPWNRDRLVVMTVATSDDQLLRLHNDLSSAQINAGIRGDTAIITDENGIRSFRVGAQFPSGELPWYMMVVWYANQHSVLLAVAAMLLSALVGSAAWVMLKRHAWRRLNPKQGRDSGRK
>NZ_CP016889.1|WP_069025583.1|1612842_1616658_+|cellulose-biosynthesis-protein-BcsC
MKKNLLSAGIRKALLLGSALALSQPLLAAESANPALQALFDQASYWHQKAHDDLATASLQKVLMVEPNNTQALYLLALYSQQGGDTAAAAQYRALLSQVSPNDPHLGELDNARQMQTIPQAQLALARQQARSGNIPAALQTWRNTFSGNAPPPSVAAEYYLTMAGDRTLLPQAVEALRQFAAQHPQDTGARLALGKALTYQEPTRREGIEVLSSLASGNQDADRSLRQALLWLGPQPSDAALYQTWQQRHPQDSAVIDYYRKNVGGAEKGAGFSALNSGDVGGAQSSFEKVLGANPQDADALAGMGYVAQRAGRYQEAADYLQRSAQLGGDQGSSRQQQADDARFYAQLASAQQALKSGDTAQALTLSEPLVQADGEKGLAARLFRADVLRRTNQPQQAEQLYRTILQSDADNRSAKEGLFYVLRQQNRGAEASTLLGALPDSVRQSVTPRANEADALRQQAKRQLAAGNNAAAIATLQQGIQRYPTDGWLRLDLARLYRQQGDTLLAANVMQPVMRNGASTSELYAGALNASESGGWQQASTLLSRIPANAKTAAMRELAQRVNFNLQMSTADQYLAQGATAAAANTLKALTVNPPTNPVDAGNLAQKLAQAGDLTSAVSVVRTNLQRGVQGNAGDYAAQMTVLNQAGLGSEAQRFLSNPELQARSTPTQLAGIRNGYLINEVDRLRQQRQYAVAYDKLIGALQQDPQNRDLMFAMARLYQDGKMNRDAGVVYDYLMTQDTPTQDARVGAINVALAQNNVQRANELSRGLNSTTQTPDRLLLLARVAEANGEHSQAMTYLRSARGQLIGLQGAQPGSVPTVGGLALADNPFINRDTSPVGRSPSSYGTVLPWQAAPASVAAGVTTQGEPAAGSETVSRQSQILHDVDTMMDSLQEKTGSWSQGMVQVRGRDGESGLSKLTEAKAPLTFSTVPFETARLDFTATPVSLTAGSGAADAWRRFGTNALSQGRVVAAGGATVNDLPNATTDSQTASGVELNLALKGDSYKVDIGSTPLGQDLSTLVGGVQWSPKLTDFLTLILTGERRAITDSLLSYVGAEDKTSGKRWGRVTKNGANALLSYDNGDAGFYAGAGAYSYLGENVASNNNLQATAGAYVRPFHTDDRELKVGMSLSWMDFSKNLSYFSYGQGGYFSPQNYASVSFPIEFSRKFDDLKVNIGGAAGYQTYSQDKSAYFPSDASLQSELESLAASGSVKDAYYSGGSKNGIGYNLHAGADYKLNKDVTIGGQLGYDTFGDYNESSAQLYVRYLFGEK
>NZ_CP016889.1|WP_039390438.1|1617108_1618116_+|endoglucanase
MKRNPLWRVWLCSVLLLACSAQASASGWETFKSRFVTSEGRITDTANNNVSHTEGQGYGMLLAVANDDRATFDRLWQWTRSQLRNPQTGLFYWRYVPGSDNPVADKNNASDGDVLLAWALQRAAQKWQVDSYQQESDRIQRAIIRLDVTSFGGHTVMLPGAQGFNKVSYVVLNPSYFLFQAWREFGEHSHLQVWDKLINDGFDLLGKLSFGKTGLPMDWVALNADGSVAPAVGYSNRFSYDAIRVPLNIWWYDPHSLALVPFQRVWQGYSRMLTPAWFDVLANAPAPYHLEGGLLAVRDLTLNETGYLSDKLAADQNYFSASLQLLTWQAFQEKR
>NZ_CP016889.1|WP_069025584.1|1618249_1619911_-|cellulose-biosynthesis-protein-BcsG
MNTDQPAAASSSRFWSSWRGLGGWNFYFLLKFGLLWYGYLNFHALSNLVFLAWLLFPLPSARLHRIRQLISIPVGIALFWHDTWLPGLSSILSQGDQLAGFSAAYLLDLADRFINWQMVGAAFVLLVLYLFVSQWIRITVLVSLMLIWLNVLTIAGPAMSLLPTRTATPQVVLNQTPSGGQPAATPDGLEQSAPPTSANLTAWLNRFHESERQRVTHFPDNLPADSQPFDILVINICSLAWSDMDASQLRNHPLWQHFDIMLSNYNAATSYSGPAGIRLLRASCGQTSHSDLYKPADPRCYLFDNLAKLGFKEQLMMDHTGVFGNYLKEVREGGDIQAPLMSQAGIAPELTSFDGSPVFNDAQLMQRWLDDRSKSSDARSATFYNLIPLHDGTRELGSTKTAPWKPRAQLLFDQLDTFMTQLEKSGRRVMVMVVPEHGAALEGDKMQMSGLRDIPSPDITHVPVGIKFVGMKAPHQAQPLNIDAPTSLLALSEIVSRVVDGQVFNAPNVNMSVLTDKLPQTPVVSENDGAVVMMYQGKPWIRLNGGDWVAYPQ
>NZ_CP016889.1|WP_039390442.1|1619910_1620099_-|cellulose-biosynthesis-protein-BcsF
MNLMDWVQIALLTLVILLFLKPLYQKWLPRRWNGIMNRLLPARALKSEGHWQRQSSETDRKN
>NZ_CP016889.1|WP_069025585.1|1620098_1621634_-|cellulose-biosynthesis-protein-BcsE
MKNSFSLGLLHVQPELTALQTPGCYWVTCARQDDARTFIRQVISHQPAVTLISADQPPRDLLTPDPIGGPDRIPLFSLSKSKGSLLQLESDFLRTLGSKNGLVIFNSNAAQWDKLDDAELSRWIKGMRQTLHKRKLTLLIVTSGTTIINLSNHLQRYFRQLDGVAHLSFQQDSWQYRINWWYAAERLLADRAIRLGCENERFFTLNEKQEPLSLNDEQHYLADKIVLEGAPPLSRQWQLFEDNEQVWLRAQQANAATVIFSLTRSEYINELAKMVHSLRRTRGNGLKIVVREMGASLRYSDERLLLACGVNAIVPTNATLSRFLTTLEGLQGQVFNRRVPASLEALTASLQPLHEKGYLRLDAFCQSVGQLISNTLLPENDKGLLVALRPVPQLKPQQILTLCKPRRFGDLVTVLEDRVILFLSSCRYNDLDKALKYIFSLPHDELFANRMVWFEDNQILAEVSNIKKLTPMAIQDMTPVSETARAAVESRPETHERAAPQPITLLPENNA
>NZ_CP016889.1|WP_069025586.1|1621834_1622032_+|hypothetical-protein
MKNHNLYNPVAADGDRQDDISALRDAFSLHSFRYVDIAREERLKAIVSRWPLLAETLARQSETDR

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Crispr_ID: NZ_CP016889_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016889_4

1610016-1610107

Orphan

Consensus_repeat	Method
CTGATGCTGCTTCCAGCACGCAGCCTGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016889_4

>merge|NZ_CP016889|4|1610016-1610107|CRISPRCasFinder
CTGATGCTGCTTCCAGCACGCAGCCTGCCAGTGCGCCGGTAAACAGTCCGGCTCCGATGCCGTCTGATGCTGCTTCCAGCACGCAGCCTGCC

>NZ_CP016889|4|4|1610016-1610107|CRISPRCasFinder
CTGATGCTGCTTCCAGCACGCAGCCTGCC	AGTGCGCCGGTAAACAGTCCGGCTCCGATGCCGT
CTGATGCTGCTTCCAGCACGCAGCCTGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016889.1\|WP_069025587.1\|1622031_1622763_+\|cellulose-synthase-operon-protein-YhjQ	unknown	unknown	gnl\|CDD\|368976
NZ_CP016889.1\|WP_069025590.1\|1627648_1631116_+\|cellulose-biosynthesis-protein-BcsC	unknown	unknown	gnl\|CDD\|183140
NZ_CP016889.1\|WP_064703249.1\|1596649_1598341_+\|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase	unknown	unknown	gnl\|CDD\|183198
NZ_CP016889.1\|WP_069025584.1\|1618249_1619911_-\|cellulose-biosynthesis-protein-BcsG	unknown	unknown	gnl\|CDD\|371656
NZ_CP016889.1\|WP_069025585.1\|1620098_1621634_-\|cellulose-biosynthesis-protein-BcsE	unknown	unknown	gnl\|CDD\|371330
NZ_CP016889.1\|WP_010671648.1\|1607771_1609883_+\|UDP-forming-cellulose-synthase-catalytic-subunit	unknown	unknown	gnl\|CDD\|274400
NZ_CP016889.1\|WP_069025583.1\|1612842_1616658_+\|cellulose-biosynthesis-protein-BcsC	unknown	unknown	gnl\|CDD\|377509
NZ_CP016889.1\|WP_039390424.1\|1595339_1595804_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP016889.1\|WP_010671644.1\|1604473_1605496_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP016889.1\|WP_010257431.1\|1595899_1596328_+\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP016889.1\|WP_069025589.1\|1625367_1627656_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	unknown	unknown	gnl\|CDD\|236851
NZ_CP016889.1\|WP_039390428.1\|1599772_1601383_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173858
NZ_CP016889.1\|WP_022624838.1\|1606918_1607722_+\|cellulose-synthase-operon-protein-YhjQ	unknown	unknown	gnl\|CDD\|274549
NZ_CP016889.1\|WP_010671643.1\|1602582_1603485_+\|dipeptide-ABC-transporter-permease-DppC	unknown	unknown	gnl\|CDD\|182833
NZ_CP016889.1\|WP_069025581.1\|1606343_1606928_+\|cellulose-biosynthesis-protein-BcsO	unknown	unknown	gnl\|CDD\|374957
NZ_CP016889.1\|WP_039390442.1\|1619910_1620099_-\|cellulose-biosynthesis-protein-BcsF	unknown	unknown	gnl\|CDD\|371386
NZ_CP016889.1\|WP_010257423.1\|1603497_1604484_+\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182906
NZ_CP016889.1\|WP_039390438.1\|1617108_1618116_+\|endoglucanase	unknown	unknown	gnl\|CDD\|366548
NZ_CP016889.1\|WP_069025586.1\|1621834_1622032_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371309
NZ_CP016889.1\|WP_069025588.1\|1622759_1625363_+\|UDP-forming-cellulose-synthase-catalytic-subunit	unknown	unknown	gnl\|CDD\|236918

Protein	Function_ID	Function_description	E-value
NZ_CP016889.1\|WP_069025587.1\|1622031_1622763_+\|cellulose-synthase-operon-protein-YhjQ	gnl\|CDD\|368976	pfam06564, CBP_BcsQ, Cellulose biosynthesis protein BcsQ. This is a family of bacterial proteins involved in cellulose biosynthesis. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)). A second component of the extracellular matrix of the multicellular morphotype (rdar) of Salmonella typhimurium and Escherichia coli is cellulose. The family does contain a P-loop sequence motif suggesting a nucleotide binding function, but this has not been confirmed.	1.34927e-100
NZ_CP016889.1\|WP_069025590.1\|1627648_1631116_+\|cellulose-biosynthesis-protein-BcsC	gnl\|CDD\|183140	PRK11447, PRK11447, cellulose synthase subunit BcsC; Provisional.	0
NZ_CP016889.1\|WP_064703249.1\|1596649_1598341_+\|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase	gnl\|CDD\|183198	PRK11560, PRK11560, kdo(2)-lipid A phosphoethanolamine 7''-transferase.	0
NZ_CP016889.1\|WP_069025584.1\|1618249_1619911_-\|cellulose-biosynthesis-protein-BcsG	gnl\|CDD\|371656	pfam11658, CBP_BcsG, Cellulose biosynthesis protein BcsG. CBP_BcsG is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	0
NZ_CP016889.1\|WP_069025585.1\|1620098_1621634_-\|cellulose-biosynthesis-protein-BcsE	gnl\|CDD\|371330	pfam10995, CBP_GIL, GGDEF I-site like or GIL domain. The GIL domain, for GGDEF I-site like domain, is a c-di-GMP binding domain on the BcsE proteins of enterobacteria. It is not essentail for cellulose synthesis but is critical for maximal cellulose production. Cellulose production in enterobacteria is controlled by a two-tiered c-di-GMP-dependent system involving BcsE and the PilZ domain containing glycosyltransferase BcsA.	0
NZ_CP016889.1\|WP_010671648.1\|1607771_1609883_+\|UDP-forming-cellulose-synthase-catalytic-subunit	gnl\|CDD\|274400	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.	0
NZ_CP016889.1\|WP_069025583.1\|1612842_1616658_+\|cellulose-biosynthesis-protein-BcsC	gnl\|CDD\|377509	pfam05420, BCSC_C, Cellulose synthase operon protein C C-terminus (BCSC_C). This family contains the C-terminal regions of several bacterial cellulose synthase operon C (BCSC) proteins. BCSC is involved in cellulose synthesis although the exact function of this protein is unknown.	3.63621e-147
NZ_CP016889.1\|WP_039390424.1\|1595339_1595804_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.65641e-22
NZ_CP016889.1\|WP_010671644.1\|1604473_1605496_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	0
NZ_CP016889.1\|WP_010257431.1\|1595899_1596328_+\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	5.40344e-77
NZ_CP016889.1\|WP_069025589.1\|1625367_1627656_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	gnl\|CDD\|236851	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB.	0
NZ_CP016889.1\|WP_039390428.1\|1599772_1601383_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173858	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an ATP-binding cassette (ABC)-type dipeptide import system. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP016889.1\|WP_022624838.1\|1606918_1607722_+\|cellulose-synthase-operon-protein-YhjQ	gnl\|CDD\|274549	TIGR03371, cellulose_yhjQ, cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	3.424e-55
NZ_CP016889.1\|WP_010671643.1\|1602582_1603485_+\|dipeptide-ABC-transporter-permease-DppC	gnl\|CDD\|182833	PRK10913, PRK10913, dipeptide ABC transporter permease DppC.	0
NZ_CP016889.1\|WP_069025581.1\|1606343_1606928_+\|cellulose-biosynthesis-protein-BcsO	gnl\|CDD\|374957	pfam17037, CBP_BcsO, Cellulose biosynthesis protein BcsO. This is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	1.28328e-14
NZ_CP016889.1\|WP_039390442.1\|1619910_1620099_-\|cellulose-biosynthesis-protein-BcsF	gnl\|CDD\|371386	pfam11120, CBP_BcsF, Cellulose biosynthesis protein BcsF. CBP_BcsF is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	3.16799e-16
NZ_CP016889.1\|WP_010257423.1\|1603497_1604484_+\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182906	PRK11022, dppD, dipeptide transporter ATP-binding subunit; Provisional.	0
NZ_CP016889.1\|WP_039390438.1\|1617108_1618116_+\|endoglucanase	gnl\|CDD\|366548	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8.	4.14153e-100
NZ_CP016889.1\|WP_069025586.1\|1621834_1622032_+\|hypothetical-protein	gnl\|CDD\|371309	pfam10945, CBP_BcsR, Cellulose biosynthesis protein BcsR. CBP_BcsR is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation).	1.30894e-14
NZ_CP016889.1\|WP_069025588.1\|1622759_1625363_+\|UDP-forming-cellulose-synthase-catalytic-subunit	gnl\|CDD\|236918	PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional.	0

>NZ_CP016889.1|WP_010671648.1|1607771_1609883_+|UDP-forming-cellulose-synthase-catalytic-subunit
MSKIGFYLLLLVLAPVAAVIIITPMDSQKQYIFGLISIGMMFLLGFSKSRKITVVMVVLSALMSSRYIWWRTTETLHFNSEVEAILGIGLYLAELYVWLILILGFLQTTWPLKRTIEPLPDDTSLWPTVDIYVPSYNESLDVVRDTVLAAQCIDYPRDKIRVYLLDDGKRSEFARFAADVGVGYITRDDNKHAKAGNLNHAMKITKGELICIFDCDHVATRTFLQATVGPFLKDPKLALLQTPHYFYSPDPFERNLRAARSIPNEGSLFYGPVQQGNDNWNATFFCGSCAVIRRSALEEIGGFAVETVTEDAHTALKMQRLGWGSAFLSIPLAAGLATERLGLHIIQRTRWARGMTQIFRVDNPLFGRGLKWQQRLCYLNAMLHFQFGLPRVAFLTAPLAYLLFNLNIIHSSASLIFAYVLPHLVMSLYVNSRMNGRFRYTFWGEIYETVMCFHLVIPTILTLLSPKHGKFNVTDKGGVLDQGFFDFHIVRPHVIVALLLGIGIVAGVVRAVMHDYFGVDPYVIALNVGWAIFSLIILMAAIAVARETKQVRKTIRVEVQIPAIIHYASGISSRTQTSNLSMGGAQLDAPDGRHETDEIEEIDLLLKSGAITIPVSQISGDDESIRLRFEAMPLARRRELVRVVLARADAWIQPEYKQDNPLISLGTIIRTVFELFWLTWKGRHDKRKNVDPVAAAAKEDGAA
>NZ_CP016889.1|WP_022624838.1|1606918_1607722_+|cellulose-synthase-operon-protein-YhjQ
MPLVCVCSPKGGVGKTTLAANLAWSLARSGSKVLAIDFDVQNALRLHFGVPLHDGRGFVARSEEQADWSQSILTTGGNIFVLPYGDVTEPQRERFEENLMKDPHFIKRGLDTVLNYPGLVIVADFPPGPGPALKAMTTLADMHLVVMLADTASVSLLPQIEENRMIGKPLNNKQGHYFILNQCDNRRNINRDVTAFMQQRLGDNLLGVVHRDESVGEANASQQSVYDFSPASAAAFDIELIAKRVSSILNITVGNGEVQAPIRTNHF
>NZ_CP016889.1|WP_069025581.1|1606343_1606928_+|cellulose-biosynthesis-protein-BcsO
MKNNYDDLQRFKEKTQTLDIDFKDMSGQTQEAAEHSKWALIRQLAKEEHQTPFGGGERIDLPQPQPLRGDEFTAPPPGATARHAALTAQPAMAARTSILDSLSGSNLPATSTTARGPSSLFPPPLQKAAVAEPATPLRAEPVRPATVAELQPVVAPTATHSEPGRFGALFRSREINLPKETLLKPLLEKIALCH
>NZ_CP016889.1|WP_010671644.1|1604473_1605496_+|ABC-transporter-ATP-binding-protein
MSHETTKDQFLLQAIDLKKHYPVKKGLFGQERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIETPTEGQLYWHGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVSQILEEPLVINTQLTRAERREKTLEMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVLIADEPVSALDVSVRAQVLNLMMDLQQDMGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGSKEAIFANPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCHRRFGTCVQLQPKLKNYGGQEIACFAVDQDENQPVGVAEKVS
>NZ_CP016889.1|WP_010257423.1|1603497_1604484_+|dipeptide-ABC-transporter-ATP-binding-protein
MALLNVDKLSVHFGDDKAPFRAVDRISYQVEQGQVVGIVGESGSGKSVSSLAIMGLIDFPGKVMAEKLEFNQRDLQNISERERRQLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKRTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQRQENMALILITHDLALVAEAAHHIIVMYAGQVVESGKATDIFKAPRHPYTQALLRALPEFAADKARLASLPGVVPGKYDRPIGCLLNPRCPYATDLCRQEEPELRTIPGRQSKCHYPLDDAGRPTYES
>NZ_CP016889.1|WP_010671643.1|1602582_1603485_+|dipeptide-ABC-transporter-permease-DppC
MSVVDPGSVTVAPKPMTPFQEFWHYFKRNKGAVVGLVYIIIVLLCAIFADVLAPHAPAEQFRDALLHPPVWQEGGSWSYILGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIFGVIFGLLAGYLGGVVDAIIMRVVDIMLALPSLLLALVLVAIFGPSIVNASIALTFVALPHYIRLTRAAVLVEVNRDYVTASGVAGAGMLRQMFVNILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQYAQSAWWVVTFPGLVILLTVLAFNLMGDGLRDALDPKLKQ
>NZ_CP016889.1|WP_039390428.1|1599772_1601383_+|ABC-transporter-substrate-binding-protein
MINSLAKSGMLKVGLSLIAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSRQIYNRLVEFTIGTTELHAALAEKWDVSEDGKTYTFHLRKGVKWQTTKDFKPTRDFNADDVVFTFERQLDKNNAYHGVSGGSYEYFEGMDMPKLISKIEKVDENTVRFVLTRPESPFLADLGMDFASILSKEYADNMLKAGTPQNVDLNPVGTGPFQLLQYQKDSRILYKANPDYWGTKPKIDRLVFSITPDASVRYAKLQKGECQVMPYPNPADIARMKQDKNINLYEQAGLNVGYLSYNVEKKPLDNLKVRQALTMAVNKKAIIEAVYQGAGQPAKNLIPPTMWGYNDDVKDYAYDPEKAKALLKEAGMADGFSIDLWAMPVQRPYNPNARRMAEMIQSDWAKIGVKAKIVTYEWGEYLKRAKAGEHQTVMMGWTGDNGDPDNFLATLFSCSAAKDGSNYSRWCDKSFEDQIQPARATADQAKRIEYYKQAQVVMHDQVPALMIAHSTVYEPVSKKVSGYKVDPLGGHYFAQVDIKE
>NZ_CP016889.1|WP_064703249.1|1596649_1598341_+|kdo(2)-lipid-A-phosphoethanolamine-7''-transferase
MNYIKTLTQQKLSLLLALYLGILLNLPIFYRRFDGFLRHSTVTNWLTAVTEVMAIVVLTFFLMRLLSLGGKWFYRVLATLIVLISVAAAYYMAFFNVVIGYGIVASVMTTDTDLSKEVIGYHFILWMVLVSALPLLMIWRNKLSMTLNEQLRTPGQRLKPTLIMLLCVALVWLPIRFFDKLQKHNEEITNIDLPSYGGVVAHSYLPSNWLAAVGLFAWTRVDESLNSQELLDPAKKFTYVAPAGLDDTYVVFVIGETTRWDHMGMLGYERDTTPKLSKEKNLVAFRGESCDTATKLSLRCMFVREGGTMDNPGRTLKEQNVFAVMKELGFTSELFAMQSEVWFYDNINANNFAFREQIGSEKRNQGKAVDDMLLVPEMKASLDRFPKGKHLIVLHTKGSHYLYSQRYPRSFAKYQPECMGVDETCSKAQLINAYDNSVLYVDSMLDSVLDQLRDKKAIVFYAADHGESISENMHLHGTPREMAPPEQFRVPMIVWASDKYLEDSQNRSNFERLQAQQRVGRTHRHVELFDTILGCLGYTSPDGGINPANNWCQAPGNGQAKPL
>NZ_CP016889.1|WP_010257431.1|1595899_1596328_+|organic-hydroperoxide-resistance-protein
MSLEQVVYRAKAKATGGRDGRATSSDGVLDVKLGVPKEMGGAGGEVTNPEQLFAAGYSACFLGAMKFVAGRDKITMPKDAWIEGEVGIGPIPDGFGIEATLNIHLPEMDEAEAQKLVDAAHIVCPYSNATRNNIDVTLNIIR
>NZ_CP016889.1|WP_039390424.1|1595339_1595804_+|MarR-family-transcriptional-regulator
MNCDQDDKKVKTMPLLVDQQLCFALYSANLAMNKVYRQLLSQLDITYPQYLVMLVLWQKDDVTVSEIGEQLFLDSATLTPLLKRLESAGLINRQRTRQDERQVAVTLTEAGQALRARAEAIPEAVKCATACDDDALLALKLQLDGLRDNLNQSR
>NZ_CP016889.1|WP_069025583.1|1612842_1616658_+|cellulose-biosynthesis-protein-BcsC
MKKNLLSAGIRKALLLGSALALSQPLLAAESANPALQALFDQASYWHQKAHDDLATASLQKVLMVEPNNTQALYLLALYSQQGGDTAAAAQYRALLSQVSPNDPHLGELDNARQMQTIPQAQLALARQQARSGNIPAALQTWRNTFSGNAPPPSVAAEYYLTMAGDRTLLPQAVEALRQFAAQHPQDTGARLALGKALTYQEPTRREGIEVLSSLASGNQDADRSLRQALLWLGPQPSDAALYQTWQQRHPQDSAVIDYYRKNVGGAEKGAGFSALNSGDVGGAQSSFEKVLGANPQDADALAGMGYVAQRAGRYQEAADYLQRSAQLGGDQGSSRQQQADDARFYAQLASAQQALKSGDTAQALTLSEPLVQADGEKGLAARLFRADVLRRTNQPQQAEQLYRTILQSDADNRSAKEGLFYVLRQQNRGAEASTLLGALPDSVRQSVTPRANEADALRQQAKRQLAAGNNAAAIATLQQGIQRYPTDGWLRLDLARLYRQQGDTLLAANVMQPVMRNGASTSELYAGALNASESGGWQQASTLLSRIPANAKTAAMRELAQRVNFNLQMSTADQYLAQGATAAAANTLKALTVNPPTNPVDAGNLAQKLAQAGDLTSAVSVVRTNLQRGVQGNAGDYAAQMTVLNQAGLGSEAQRFLSNPELQARSTPTQLAGIRNGYLINEVDRLRQQRQYAVAYDKLIGALQQDPQNRDLMFAMARLYQDGKMNRDAGVVYDYLMTQDTPTQDARVGAINVALAQNNVQRANELSRGLNSTTQTPDRLLLLARVAEANGEHSQAMTYLRSARGQLIGLQGAQPGSVPTVGGLALADNPFINRDTSPVGRSPSSYGTVLPWQAAPASVAAGVTTQGEPAAGSETVSRQSQILHDVDTMMDSLQEKTGSWSQGMVQVRGRDGESGLSKLTEAKAPLTFSTVPFETARLDFTATPVSLTAGSGAADAWRRFGTNALSQGRVVAAGGATVNDLPNATTDSQTASGVELNLALKGDSYKVDIGSTPLGQDLSTLVGGVQWSPKLTDFLTLILTGERRAITDSLLSYVGAEDKTSGKRWGRVTKNGANALLSYDNGDAGFYAGAGAYSYLGENVASNNNLQATAGAYVRPFHTDDRELKVGMSLSWMDFSKNLSYFSYGQGGYFSPQNYASVSFPIEFSRKFDDLKVNIGGAAGYQTYSQDKSAYFPSDASLQSELESLAASGSVKDAYYSGGSKNGIGYNLHAGADYKLNKDVTIGGQLGYDTFGDYNESSAQLYVRYLFGEK
>NZ_CP016889.1|WP_039390438.1|1617108_1618116_+|endoglucanase
MKRNPLWRVWLCSVLLLACSAQASASGWETFKSRFVTSEGRITDTANNNVSHTEGQGYGMLLAVANDDRATFDRLWQWTRSQLRNPQTGLFYWRYVPGSDNPVADKNNASDGDVLLAWALQRAAQKWQVDSYQQESDRIQRAIIRLDVTSFGGHTVMLPGAQGFNKVSYVVLNPSYFLFQAWREFGEHSHLQVWDKLINDGFDLLGKLSFGKTGLPMDWVALNADGSVAPAVGYSNRFSYDAIRVPLNIWWYDPHSLALVPFQRVWQGYSRMLTPAWFDVLANAPAPYHLEGGLLAVRDLTLNETGYLSDKLAADQNYFSASLQLLTWQAFQEKR
>NZ_CP016889.1|WP_069025584.1|1618249_1619911_-|cellulose-biosynthesis-protein-BcsG
MNTDQPAAASSSRFWSSWRGLGGWNFYFLLKFGLLWYGYLNFHALSNLVFLAWLLFPLPSARLHRIRQLISIPVGIALFWHDTWLPGLSSILSQGDQLAGFSAAYLLDLADRFINWQMVGAAFVLLVLYLFVSQWIRITVLVSLMLIWLNVLTIAGPAMSLLPTRTATPQVVLNQTPSGGQPAATPDGLEQSAPPTSANLTAWLNRFHESERQRVTHFPDNLPADSQPFDILVINICSLAWSDMDASQLRNHPLWQHFDIMLSNYNAATSYSGPAGIRLLRASCGQTSHSDLYKPADPRCYLFDNLAKLGFKEQLMMDHTGVFGNYLKEVREGGDIQAPLMSQAGIAPELTSFDGSPVFNDAQLMQRWLDDRSKSSDARSATFYNLIPLHDGTRELGSTKTAPWKPRAQLLFDQLDTFMTQLEKSGRRVMVMVVPEHGAALEGDKMQMSGLRDIPSPDITHVPVGIKFVGMKAPHQAQPLNIDAPTSLLALSEIVSRVVDGQVFNAPNVNMSVLTDKLPQTPVVSENDGAVVMMYQGKPWIRLNGGDWVAYPQ
>NZ_CP016889.1|WP_039390442.1|1619910_1620099_-|cellulose-biosynthesis-protein-BcsF
MNLMDWVQIALLTLVILLFLKPLYQKWLPRRWNGIMNRLLPARALKSEGHWQRQSSETDRKN
>NZ_CP016889.1|WP_069025585.1|1620098_1621634_-|cellulose-biosynthesis-protein-BcsE
MKNSFSLGLLHVQPELTALQTPGCYWVTCARQDDARTFIRQVISHQPAVTLISADQPPRDLLTPDPIGGPDRIPLFSLSKSKGSLLQLESDFLRTLGSKNGLVIFNSNAAQWDKLDDAELSRWIKGMRQTLHKRKLTLLIVTSGTTIINLSNHLQRYFRQLDGVAHLSFQQDSWQYRINWWYAAERLLADRAIRLGCENERFFTLNEKQEPLSLNDEQHYLADKIVLEGAPPLSRQWQLFEDNEQVWLRAQQANAATVIFSLTRSEYINELAKMVHSLRRTRGNGLKIVVREMGASLRYSDERLLLACGVNAIVPTNATLSRFLTTLEGLQGQVFNRRVPASLEALTASLQPLHEKGYLRLDAFCQSVGQLISNTLLPENDKGLLVALRPVPQLKPQQILTLCKPRRFGDLVTVLEDRVILFLSSCRYNDLDKALKYIFSLPHDELFANRMVWFEDNQILAEVSNIKKLTPMAIQDMTPVSETARAAVESRPETHERAAPQPITLLPENNA
>NZ_CP016889.1|WP_069025586.1|1621834_1622032_+|hypothetical-protein
MKNHNLYNPVAADGDRQDDISALRDAFSLHSFRYVDIAREERLKAIVSRWPLLAETLARQSETDR
>NZ_CP016889.1|WP_069025587.1|1622031_1622763_+|cellulose-synthase-operon-protein-YhjQ
MPQIALQGLRGGVGTTSLCAGLGWALAALGERVLLIDGSPISQLGVHFNLPAQQDNGWMKALCEGGDWQHSGLRYPDGPDLLPHGVLSHQHALTIARQNEAIAAPLLQALPDLRARYQWIIFDLPADTLPWHETLYPTLDSLLCVTQPDANCHLRLNQRQFPARTRFIINQFNANSRLQQDLHQLWMASLNPLIPLLIHRDEALAEALMMKQPVGEYRPHALVSEEIITLASWLLLNLNGVSS
>NZ_CP016889.1|WP_069025588.1|1622759_1625363_+|UDP-forming-cellulose-synthase-catalytic-subunit
MNPLCWLLTAPAWQSLHRGYTTARGNGASRFASALHLFWSVLGLMLLRFETPGWQRIIQQRRRLYPHISPERPRPLDILRYLIQTLWLLVILPQSDGARGGFRGLGALSGWRHHGYRWLDRAVAHSQTQGIDVRIEQWLKRLSPLVRRSLFAVTALFATLLALLCISQPFGLMTQFIFVVLLWSLAMLVRRVPGRFPTMMLIVLSLTVSCRYLWWRYTSTLNWDDPLSLVFGLLLIAAETYAWVVLVLGYFQTLWPLNRQPVSMPVDRDQWPGIDLLVPTYNEPLSVVRPTIYAALGIDWPKDRLNIYLLDDGDRPEFRDFAASVGINYVVRPTHEHAKAGNINHALKKYCRSEFVVIFDCDHVPTRAFLQMTMGWFIKDPRLAMMQTPHHFFSPDPFERNLGRFRRTPNEGSLFYGLVQDGNDTWDATFFCGSCAVLRRSALDEIGGIAVETVTEDAHTSLRLHRRGYTSAYIRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLDNPLFDKGLKWVQRLCYANAMLHFLSGIPRLVFLLAPLAFLLCHAYIIYAPALAIAIYVLPHMLHTSLTNSRIQGRWRHSFWSEVYETVLAWYIARPTTVALFNPHKGKFNVTAKGGLVEEQHLDWVITKPYMLLVLLNLAGVLMAFWRMQHGPANEVLTVWVSLIWVLYNMIILGGAVAVSVEARQIREAHRVEIAMPAAIAREDGHMLPCTLRDYSDGGVGLEMREPDALRENEKVWLLLRRGQQEFSFPCQVQRVFGHRAGVRLHQLTTQQHIEFIQCTFARADTWALWQDGFPEDKPVQSLADIMILGFKGYLRLAEYGPPQLRRLFNLLTVGVSWLASLLPQGIGRVPASKNALS
>NZ_CP016889.1|WP_069025589.1|1625367_1627656_+|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB
MTIPRVNRWFAALLLGSATLSCAAAQEDAPANIAGVTPVQSLPQDNGAPLRNSQLSFAQLAPPPGSMTLRGTRTTGQIEFGVRSDEVVTRALLNLSFRPSPALLPTLSQLKVYLNDELVGLITLTPEQLGKEIQTQLSIDPRYIADFNRVRFELVGHYANVCENPANSAIWLDIGKQSGIDLTLQKLPLKNDLSHFPEPFFDSRDTRPLTLPMVFSAQPDVTQQRAAAILASWFGSKTGWRGQRFPVLYNQLPQQHHAVVFATNDARPDFLKDLPPVAKPTVEIVSQPDNPYEKMLLILGRNDEDLLTAVQGIAQGELLLRGDISTIDSVKLLSPRQAYDAPNWVRTDRRTTFAELTQYENQLQSDGVQPNPVSLTLNLPPDLFLVRARGIDMDLSYRYTAPFQSDGSRLAVNLNNQFIQDYPLPPKNTTGQQLLHIPLIQGMLDKSHELLIPALRLGVVNQLRFDFDYANITISGNADGRCETATPITHHVVVDDNSSIDFSGYRHYIEMPSLRAWANAGFPFSRYADLAQTLVLMPPKPDAEQVSTLLNTLGNMGAQTGYPALRVQLTDDWATAKKQDVDLLMIGVIPKDLQDDQRIPALVDATASWLKEPVRRITPEVNPQSQREQAAESTTTISSRGPLATVIGFQSPFYDQRSVVALLADGTPRSWQLLNEAMGDSGKRGTMSGSTVVIRESGVNSLRVGESYYVGHLPWWERLWSLLSVHPFWLALCALFVVVLFALMTWRLMRIITRRRLLDEDE
>NZ_CP016889.1|WP_069025590.1|1627648_1631116_+|cellulose-biosynthesis-protein-BcsC
MNNARVLRAGMLLGALSALPGLAAPVDGPEVSPVEWLLSQVRTGESTNKYDLVQQSLYRLEKIDPDNPQVLAARLRLALRQGDIPKAQMLLEQLKKVAPDSAATRESAVGLTLMSSDGRQQLQQARLLATSGRLAEAKSAYDALFGGVFPDANTALEYWRLLARIPGQESVAYLQLQALEQRYPGNIGVELQIARMAFDQQQPAQAIAQLKKLANSNGGRAAAADLWLQQINDQPVSDSSVAQLKAYLAVFTDGDAHQQGADVLAKQQAQLADPAYRERMRGLALVEAGDVNNAMAALSRALKDNPSDAELMGAMGQTQARAGHRDVAVLWLERAVEAGKQSTLIGKWQSLLQTNRYWLAVEQGDKALAQHDVEGAERAYRAAQKIDSTDSYALIGLGDVAMARKDAAGAELFWQHALRLDATNTTTVRRLAGLYQAESPARVMQFISTLPAGQQREMAGTLRALRSDSLRAEADALARQNKWLQAAEKYRAALALQPDDVWLSYRLASALRDGGATQQADAQIATLQQQHPGDATAIYAAALYLSSRDNDDAALATLHRLPETQWNSNMHELADRLGQDKIFASAEALRAAGQERAAVTLLYQQPVSSRRDLTLADWALARGDAQQALETYQQVLSREPDSGDAALGRIEALVALQRTGEARQALEQQPAQPNTLNADRRAALAWQAVGETTQAAVRFASLKQRAASLPPSQDKALVFRDAARLERTQQQPEIALADYRQAMTASGIGSGESISRATRSQEQDDWLKRSIRSDTADLYRQRETTLTVQQDYSRNKGTAGVSDFTAHTTMLQAESPFADGRGFFRLDRVDVSAGSFTTRNGSFDEQFGSCDDASSGGCSRDASQRAEGTALGVGWHNDRWSADLGTTPLGFEVTNWTGGLSWKTDVRDLGVTLTASRRPIASSLLSYAGARDPSANGGKSWGGVVATGGSIGLSYDQGGAHGVWGDISAHQITGKNVADNSRERLMAGYYYKLINSDNRRATVGLNSMLWHYQKDLSDYTFGQGGYYSPQQYLSFSVPVTWRQRTENWSFDLGGSVSWSHSKTDAQQRYPVNPGFTLASNPVSASSTGSGTGYTLQGVVERRITPDWFIGVGVDIQQAKDYTPSHGLIYVRYSAAGWEGDLDMPPQPLTPYADFK

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Crispr_ID: NZ_CP016889_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016889_5

1704521-1704624

Orphan

Consensus_repeat	Method
TCAGGTCCGGCGGCGCAATCCTCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016889_5

>merge|NZ_CP016889|5|1704521-1704624|CRISPRCasFinder
TCAGGTCCGGCGGCGCAATCCTCTGCTGCACCTTCTGCCGTCGCCACTGCTCCGGCACCGGCTTCTCCAGCGGTTTCATCAGGTCCGGCGGTGCAATCCTCTGC

>NZ_CP016889|5|5|1704521-1704624|CRISPRCasFinder
TCAGGTCCGGCGGCGCAATCCTCTGC	TGCACCTTCTGCCGTCGCCACTGCTCCGGCACCGGCTTCTCCAGCGGTTTCA
TCAGGTCCGGCGGTGCAATCCTCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016889.1\|WP_010257253.1\|1701448_1702054_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225706
NZ_CP016889.1\|WP_069025609.1\|1697749_1699018_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP016889.1\|WP_010671680.1\|1695758_1696592_-\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|366780
NZ_CP016889.1\|WP_008926452.1\|1700678_1701437_+\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	unknown	unknown	gnl\|CDD\|234689
NZ_CP016889.1\|WP_039390518.1\|1705585_1706368_+\|3'-5'-ssDNA/RNA-exonuclease-TatD	unknown	unknown	gnl\|CDD\|182449
NZ_CP016889.1\|WP_031590260.1\|1710174_1711338_-\|acetyl-CoA-C-acyltransferase-FadA	unknown	unknown	gnl\|CDD\|181592
NZ_CP016889.1\|WP_069025612.1\|1711348_1713532_-\|fatty-acid-oxidation-complex-subunit-alpha-FadB	unknown	unknown	gnl\|CDD\|183293
NZ_CP016889.1\|WP_010257266.1\|1696895_1697657_+\|uridine-phosphorylase	unknown	unknown	gnl\|CDD\|183018
NZ_CP016889.1\|WP_010257219.1\|1709391_1710093_+\|NAD(P)H-flavin-reductase	unknown	unknown	gnl\|CDD\|236142
NZ_CP016889.1\|WP_010257230.1\|1706364_1706853_-\|transcription/translation-regulatory-transformer-protein-RfaH	unknown	unknown	gnl\|CDD\|181611
NZ_CP016889.1\|WP_069025608.1\|1693432_1695703_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|235367
NZ_CP016889.1\|WP_031590268.1\|1702050_1703688_+\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	unknown	unknown	gnl\|CDD\|235310
NZ_CP016889.1\|WP_003854400.1\|1692361_1693288_-\|HTH-type-transcriptional-regulator-MetR	unknown	unknown	gnl\|CDD\|185319
NZ_CP016889.1\|WP_069025610.1\|1699103_1700603_+\|DNA-recombination-protein-RmuC	unknown	unknown	gnl\|CDD\|182409
NZ_CP016889.1\|WP_069025611.1\|1707059_1707785_+\|dipeptidase-PepE	unknown	unknown	gnl\|CDD\|179990
NZ_CP016889.1\|WP_039390514.1\|1703797_1704052_+\|Sec-independent-protein-translocase-subunit-TatA	unknown	unknown	gnl\|CDD\|179867
NZ_CP016889.1\|WP_031590265.1\|1704738_1705497_+\|Sec-independent-protein-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|182840
NZ_CP016889.1\|WP_010257222.1\|1707865_1709350_+\|4-hydroxy-3-polyprenylbenzoate-decarboxylase	unknown	unknown	gnl\|CDD\|236796
NZ_CP016889.1\|WP_069025616.1\|1715049_1715667_+\|IMPACT-family-protein	unknown	unknown	gnl\|CDD\|183205
NZ_CP016889.1\|WP_069025614.1\|1713718_1715050_+\|Xaa-Pro-dipeptidase	unknown	unknown	gnl\|CDD\|237444

Protein	Function_ID	Function_description	E-value
NZ_CP016889.1\|WP_010257253.1\|1701448_1702054_+\|SCP2-domain-containing-protein	gnl\|CDD\|225706	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown].	4.96468e-72
NZ_CP016889.1\|WP_069025609.1\|1697749_1699018_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.38595e-07
NZ_CP016889.1\|WP_010671680.1\|1695758_1696592_-\|dienelactone-hydrolase-family-protein	gnl\|CDD\|366780	pfam01738, DLH, Dienelactone hydrolase family.	1.17387e-84
NZ_CP016889.1\|WP_008926452.1\|1700678_1701437_+\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	4.94676e-147
NZ_CP016889.1\|WP_039390518.1\|1705585_1706368_+\|3'-5'-ssDNA/RNA-exonuclease-TatD	gnl\|CDD\|182449	PRK10425, PRK10425, 3'-5' ssDNA/RNA exonuclease TatD.	0
NZ_CP016889.1\|WP_031590260.1\|1710174_1711338_-\|acetyl-CoA-C-acyltransferase-FadA	gnl\|CDD\|181592	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.	0
NZ_CP016889.1\|WP_069025612.1\|1711348_1713532_-\|fatty-acid-oxidation-complex-subunit-alpha-FadB	gnl\|CDD\|183293	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB.	0
NZ_CP016889.1\|WP_010257266.1\|1696895_1697657_+\|uridine-phosphorylase	gnl\|CDD\|183018	PRK11178, PRK11178, uridine phosphorylase; Provisional.	0
NZ_CP016889.1\|WP_010257219.1\|1709391_1710093_+\|NAD(P)H-flavin-reductase	gnl\|CDD\|236142	PRK08051, fre, FMN reductase; Validated.	1.50888e-174
NZ_CP016889.1\|WP_010257230.1\|1706364_1706853_-\|transcription/translation-regulatory-transformer-protein-RfaH	gnl\|CDD\|181611	PRK09014, rfaH, transcription/translation regulatory transformer protein RfaH.	1.2187e-115
NZ_CP016889.1\|WP_069025608.1\|1693432_1695703_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
NZ_CP016889.1\|WP_031590268.1\|1702050_1703688_+\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	gnl\|CDD\|235310	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed.	0
NZ_CP016889.1\|WP_003854400.1\|1692361_1693288_-\|HTH-type-transcriptional-regulator-MetR	gnl\|CDD\|185319	PRK15421, PRK15421, HTH-type transcriptional regulator MetR.	0
NZ_CP016889.1\|WP_069025610.1\|1699103_1700603_+\|DNA-recombination-protein-RmuC	gnl\|CDD\|182409	PRK10361, PRK10361, DNA recombination protein RmuC; Provisional.	0
NZ_CP016889.1\|WP_069025611.1\|1707059_1707785_+\|dipeptidase-PepE	gnl\|CDD\|179990	PRK05282, PRK05282, dipeptidase PepE.	1.62375e-107
NZ_CP016889.1\|WP_039390514.1\|1703797_1704052_+\|Sec-independent-protein-translocase-subunit-TatA	gnl\|CDD\|179867	PRK04598, tatA, twin-arginine translocase subunit TatA.	3.90569e-27
NZ_CP016889.1\|WP_031590265.1\|1704738_1705497_+\|Sec-independent-protein-translocase-subunit-TatC	gnl\|CDD\|182840	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC.	5.27359e-166
NZ_CP016889.1\|WP_010257222.1\|1707865_1709350_+\|4-hydroxy-3-polyprenylbenzoate-decarboxylase	gnl\|CDD\|236796	PRK10922, PRK10922, 4-hydroxy-3-polyprenylbenzoate decarboxylase.	0
NZ_CP016889.1\|WP_069025616.1\|1715049_1715667_+\|IMPACT-family-protein	gnl\|CDD\|183205	PRK11568, PRK11568, IMPACT family protein.	1.33244e-140
NZ_CP016889.1\|WP_069025614.1\|1713718_1715050_+\|Xaa-Pro-dipeptidase	gnl\|CDD\|237444	PRK13607, PRK13607, proline dipeptidase; Provisional.	0

>NZ_CP016889.1|WP_039390514.1|1703797_1704052_+|Sec-independent-protein-translocase-subunit-TatA
MGGISIWQLVIIAVIVVLLFGTNKLRNLGSDLGSSIRGFKKAMSDEDDKKDQPKEQDADFAAKTLADKQQTSANKEEAKNDKQV
>NZ_CP016889.1|WP_031590268.1|1702050_1703688_+|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB
MSFGEIRRLYLIMKVFLTYGLDELIPQTRLTFLFRLWRRSVFWIPNLHQHEPIGARMRMAMEQLGPVWIKFGQMLSTRRDLFPPLIADQLAILQDRVAPFDGVKAKAQIEASMGAPIETWFDDFDIKPLASASIAQVHTATLKSNGKKVVIKVIRPDILPVIRADMKLIYRLARWVPRLLPDGRRLRPVEVVRDYEKTLLDELNLLREAANAIQLRRNFEDSRMLYVPEVYSDYCSETMMVMERIYGIPISDVATLERHGVNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGIGRQLYPQLDLWKTAKPFLEEWIKDQVGLPAIIRAVKEKAPFWAEKLPELPELFYDSMRQHKLLRHSVDKLVGDMNAQRVRHHQARYLFGVGATLLLSGTAVLLTRPDWDFFPAVLMAAGIVSWLIGWRKTN
>NZ_CP016889.1|WP_010257253.1|1701448_1702054_+|SCP2-domain-containing-protein
MNLTPLITAGLETALNRILYRDRGLKPARQRLNGKVLTLRLNEFSHPLVLVFSEQQVDVLADWQDRSDCTVITSLKTLPKLRDRQQLTPLIRSGELQVEGDLQVVQQFSALMDLAELDPAEYLAPWVGDIAAQGISQRSQQALRFFKGEVQRRQDYLGQAITEEWRVAPGSLELAWFSEEVDAMERSLEALDARLAQLEAK
>NZ_CP016889.1|WP_008926452.1|1700678_1701437_+|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE
MADESQQETTHFGFQTVAKSEKADKVADVFHSVAAKYDLMNDLMSFGVHRIWKRFTIDSSGVRRGQRVLDLAGGTGDLTAKFSRLVGETGQVVLADINSSMLKMGREKLRNQGVVGNVSYVQANAEALPFPDNYFDCITISFGLRNVTEKEKALASMFRVLKPGGRLLVLEFSKPVLDPLSKAYDAYSFHILPRIGQLVAQDAESYRYLAESIRMHPDQETLKAMMNDVGFENTTYSNMTGGIVALHRGFKF
>NZ_CP016889.1|WP_069025610.1|1699103_1700603_+|DNA-recombination-protein-RmuC
MDQHIIISACLALAGLGIGWMLAQLRAGHQVASFQTERRLQEEAQQRQQQQIEQLQQQMQQREQELRQLHGALSGANERLQQLDYWRNESEQLNRELRNQLEVNSAQEAELREVTIRLEETRFAAEEKQRLLTNSEQRLSAQFENLANRIFENSGRRVDEQNRQSLDGLIGPLREQLDGFRRQVHESFGAEARERHTLTHEIRQLQQLNAQMAQEALNLTKALKGDNKIQGNWGEVVLSRVLEASGLREGYEYETQVSIQSEQQGRMQPDVIVRLPQGKDVVVDAKMTLVAYERYFNADDEIEREQAIQEHVAAMRAHIRLLGRKDYQQLPGLRSLDYVLMFIPVEPAFLLAIDRQPELIGEALQQNIMLVSPTTLLVALRTINNLWRYEHQSRNAQRIADRATRLYDKMRLFVDDMSGIGHSLDKAQNSYREAMKKLSEGRGNLIAQTEGFRALGVEIKRPINPQLAERAMPENRAADDADDDSDADESAMRVRRLHE
>NZ_CP016889.1|WP_069025609.1|1697749_1699018_+|tetratricopeptide-repeat-protein
MRNTIPVRRPAHGANPAALKAMLERSAERFRAAMQQGDYALAAQCCEEVLRTMPNQMQVLSDYALCLLRLGQYNKSYKIYQKIYQSPPAVQATASETWLDGLTEVCGWLDKKDEVARHGLASLKRSDARFSQGQRATFPAPQPEPVDLTHPHQNVIAFCLFGDQPRYCETLIKNVEVAPELYPGWVCRIYLDDSVPQHVWQRLDQPHVQLIDMSHEKTLFPTLWRFLVMDDPGVKRFIVRDADSLLSEREAAAVNAWLASPYWFHHMRDYFSHTELLLAGMWGGCHGVFRDVEQAMRDFIAEYQGSQRFTDQYFLKVALWPTVRESLLSHDALFHFHQAQPWPDHAPVRWQTPHFHVGSNAGFASMTGKSSAAEGSRQRVAITSGGTTWHYLAQVKKGEWLLPMPFFLIDDWQAGKLTVAAL
>NZ_CP016889.1|WP_010257266.1|1696895_1697657_+|uridine-phosphorylase
MTQSDVFHLGLTKADLQGATLAIVPGDPERVKKIAGLMEDATHLASHREFTSWLAKIDGKPVVVCSTGIGGPSTSIAVEELAQLGVRTFLRVGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPMEFPAVADFACTTALVAAAEACGAKTHIGITASSDTFYPGQERYDTVSGRVVSRFRGSMKEWQEMGVLNYEMESATLLTMCASQGLRAGMVAGVIVNRTQKEIPDAVTMKQTESDAVKIVVEAARRLL
>NZ_CP016889.1|WP_010671680.1|1695758_1696592_-|dienelactone-hydrolase-family-protein
MKPSDNMAQKPATGGFAPAVQPTASTTIITDSPAIHAGETSVPSQGENMPAFFAKPQSAEGPWPVVLVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPAEYNDIPTLFSELVSKVPDSQVLADLDHAANWAARNGGDIRRMGITGFCWGGRISWLYAAHNPQLRAAVAWYGRLTGERTLKQQKHPIDIAVDLNAPVLGLYGGQDEGIPLESVEQMRQALHAANATAEIIVYPEAGHAFNADYRASYHAESANDGWQRMLAWFRQYGVASQ
>NZ_CP016889.1|WP_069025608.1|1693432_1695703_+|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MTILNHTLGFPRIGLRRELKKALESYWAGDSTQQALLATGRELRARHWQQQKEAGVDLLPVGDFAWYDHVLTTSLMLGNVPARHQNKAGTVDLDTLFRLGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFTQGQTFKLTWTQLLDEVDEALALGHNIKPVLLGPVTYLWLGKVKGEPFERLSLLEGILPVYQQVLAELAKRGIEWVQIDEPALALELPQTWREAFQPAYDALQGHSKLLLTTYFDSIGQNIDVIRALPVQGLHVDLVHGGDDIQQLNQQLPASWLLSLGVINGRNVWRADLSRWFSRLQPLTRAREQVWIGSSCSLLHSPIDLSVETRLDDEVKSWFAFALQKCAELSLLSQSLNNNDATALEAWSAPVHARAHSRRVHNAAVGQRLQAITSQHSERQSAYPVRAVLQRQRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDSNHYRTGIAEHIKQAILEQERLGLDVLVHGEAERNDMVEYFGEHLEGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWARYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVEDLENAGIGIIQIDEPALREGLPLHQSEWAAYLNWAVEAFRLNAAVARDETQIHTHMCYCEFNDIMDAIAALDADVITIETSRSDMDLLEAFENFDYPNEIGPGVYDIHSPNVPSVEWIEALLLKAAKRIPEARLWVNPDCGLKTRGWTETRQALANMVTAAKKLRGETA
>NZ_CP016889.1|WP_003854400.1|1692361_1693288_-|HTH-type-transcriptional-regulator-MetR
MIELKHLRTLQALRNTGSLAAAAAQLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTPQGDILLQLAEQVLPQIQQALQACHEPHQTTLRVAIECHSCIQWLTPALDKFRQSWPQVVMDFKSGVTFDPQPALQQGELDVVLTSDILARSGLFYSPMFDYEVRLVLATDHPLAQVEQISPEDLADEVLMIYPVQRQRLDIWRHFLQPAGVSPALKSVDNTLLMIQMVSARMGIAALPHWVVESFEKQGLVVTRTLGDGLWSRLYAAVREGEQRQPVLEAFIRFARQHACEHLPFVRDAALPGAVLQR
>NZ_CP016889.1|WP_031590265.1|1704738_1705497_+|Sec-independent-protein-translocase-subunit-TatC
MAVEDTQPLISHLIELRKRLLNCIIAVLAIFLVLVYFANDIYQLVAAPLISQMPVGSSMIATDVASPFFTPIKLTIIVSVFLAVPVILYQVWAFVAPALYRHERRLVMPLLFSSTFLFYFGVAFAYFVVFPLAFGFFTKTAPIGVTVATDISKYLDFVMTLFMAFGVAFEVPVAIVLLCWTGITSPEELKKKRPYILVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEVGVFFSRYYVGKGRRLQDEDENTDS
>NZ_CP016889.1|WP_039390518.1|1705585_1706368_+|3'-5'-ssDNA/RNA-exonuclease-TatD
MFDIGVNLTSTQFASDRQKVVKRARDAGVTGMLITGTNALESQQAQRLAEDQPGFCWSTAGVHPHHASEWSTEIASTLRRLAEKPEVVAIGECGLDFNRNLSAHEQQEYAFDAQLALAAELNMPVFLHCREAHARFAAVLAPWLPKLPGAVIHCFTGTRDELEACLGMGLSVGITGWVCDERRGLELRELLPLIPADRLLLETDAPYLLPRDMRPRPTSRRNEPCFLPHIVHQVATWRGESAEELATRIDHNARTLFRLA
>NZ_CP016889.1|WP_010257230.1|1706364_1706853_-|transcription/translation-regulatory-transformer-protein-RfaH
MESWYLLYCKRGQLLRAKEHLERQEVHCLSPMIALEKIVRGKRTTVSEPLFPNYLFIEFDPEAIHTTTISSTRGVSHFVRFGTTPATVPSAVIEALETDVPQILLDPETPQSGDEVVITDGTFEGLRAIFAEPDGETRSILLLNLLNKQVMRSVDNKQFRKI
>NZ_CP016889.1|WP_069025611.1|1707059_1707785_+|dipeptidase-PepE
MELFLLSNGKLADDAPLLGYAQPQLHAMIARRAIRSAVLIPYAIIRGDQQQRAAELSASLGIEVERVQAFASPAEAIAQAELILVSGGNTWFLNQMLHEQGLIGAIQRAVRERQVPYVGWSAGCNVATPSIRTTNDMPVRSSVVLPALGLFPVQINPHYLDASVSGHMGETRDERLAEFCAVNPTESVIALREGSFLHVHDNQLRYHSVRNEDFKLFRHGEPIQGYHDARALQPLVPFQCV
>NZ_CP016889.1|WP_010257222.1|1707865_1709350_+|4-hydroxy-3-polyprenylbenzoate-decarboxylase
MKYHDLRDFLALLEQRGELKRITQSIDPELEMTEIADRTLRAGGPALLFENPKGYDMPVLCNLFGTPKRVAMGMGQEEVSALREVGKLLAFLKEPEPPKGFRDLFDKMPQFKQVLNMPTKRLRNAPCQEEVFSGDEVDLTRIPVMKCWPGDAAPLITWGLTVTRGPHKERQNLGIYRQQVIGKNRLIMRWLSHRGGALDYLEWTKAHPGERFPVSVALGADPATILGAVTPVPDTLSEYAFAGLLRGNKTEVVKCLSNDLEVPASAEIVLEGYIEAGDMAPEGPYGDHTGYYNEVDSFPVFTVTHITQRHKPIYHSTYTGRPPDEPAVLGVALNEVLVPILVKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMFGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGMDATNKWPGETQREWGTPIVKDPAVTARIDAIWDELGIFDQPPQR
>NZ_CP016889.1|WP_010257219.1|1709391_1710093_+|NAD(P)H-flavin-reductase
MTTLSCKVTSVEAITDTVYRVRLIPEAEFSFRAGQYLMVVMDERDKRPFSLASTPMEKDIIELHIGASDLNLYAMAVMDRIRNDRQITVDMPHGDAWLREESSKPLILIAGGTGFSYARSILLTALAEQPERDIAIYWGGRELKHLYDLEELDALAVKHPNLKVIPVVEQPEAGWQGRSGTVLTAVMQDFSTLSEHEIYIAGRFEMAKIARDRFCAERGAVESQMYGDAFAFI
>NZ_CP016889.1|WP_031590260.1|1710174_1711338_-|acetyl-CoA-C-acyltransferase-FadA
MENVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRELLSRNPAVNPTSLDDIVWGCVQQTLEQGFNIARNAALLAEIPHSVPATTVNRLCGSSMQALHDAARAIMVGDAQCCLIGGVEHMGHVPMNHGVDFHPGLGRTVAKAAGMMGLTAEMLARMHHISREQQDAFALRSHQRAWQATQRGDFATEIVATYGHDSDGILKRYDFDEVIREETSAEGLAALKPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRARELGLTARARIRSMAVVGCDPSIMGYGPVPASKLALKRAGLSVSDIDVFELNEAFAAQTLPCIKDLGLLERMDDKVNLNGGAIALGHPLGCSGARISTTLLNIMERRDARFGLATMCIGLGQGIATVFERL
>NZ_CP016889.1|WP_069025612.1|1711348_1713532_-|fatty-acid-oxidation-complex-subunit-alpha-FadB
MLYQGANLTLHWLDDGIAELVFDATGSVNKLDTQTVASLGEAIAVLEQQPELRGLLLSSAKPAFIVGADITEFLSLFDAPTEKLSQWLSYANSIFNRLEDLPVPTLAAIDGYALGGGCECVLATDLRIATADARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVDGNAALKLGLVDAVVSREKLREAGIIMLKAAATDGSWRARRAPKLAPLKLSPIEAAMSFTIAKAMVLQTAGKHYPAPLMAVKTIEAAASLGRDDALKLETAAFVPLAQSDEARALVGIFLNDQYVKGLAKKRGSESGAPAQAAVLGAGIMGGGISYQSAWKGVPVRMKDINPQALTLGMNEASKLLNKLLERGKIDGNKLASVIATIQPTLDYAGFEQADVVVEAVVENPLIKAKVLAETEQHLRKDAILASNTSTIPISQLAQALQRPEKFCGMHFFNPVPRMPLVEVVRGEKTSEATLSKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRQIDKVMEKQFGWPMGPSWLLDVVGIDTAHHAQSVMADGFPDRMKHDYRDAIDLLFDAGRFGQKNGKGFWRWEEDKKGKLTKVADTEVDTLLEQACQPKRVFSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYGLGFPPFRGGAFRYLDTLGNSNVVDQARRYSALGGLYALPALLVQKAHQHESWYPAAKPIDEAALKSA
>NZ_CP016889.1|WP_069025614.1|1713718_1715050_+|Xaa-Pro-dipeptidase
MDSLKTLYHAHIATLQQRAQQVLARNKLDAMLIHSGELLTVFLDDHTYPFKVNPQFKAWVPVTQVPNCWLWIDGVNKPKLWFYSPVDYWHNVEPLPDSFWTGDVEVIGLKNADEIAQLLPAQRDNVAYIGPVNARASQLGIASGNINPKAVIDFLHFHRSIKTDYELACLRQAQKLAVAGHRAAKEAFSAGLSEFDINQAYLTATGHRDTDVPYGNIIALNEHAAVLHYTRLDHQPPAKRHSFLIDAGAEYLGYAADLTRSYAAQSSSLYARMVEAMNTEELALIATLKPGVRYSDYHLQMHQRIAKMLLKFELVQGISEEALVAEDLTGPFMPHGLGHPLGLQVHDVAGFMQDEQGTHLAAPAQYPYLRCTRVLQPGMVLTIEPGFYIIDSLLKPLREGRFSQHFNWQAIDALRPYGGIRIEDNVVIHAHRVENMTRDLHLA
>NZ_CP016889.1|WP_069025616.1|1715049_1715667_+|IMPACT-family-protein
MEAFDIPAVPVSSSEETIKKSRFITLLAHTEGAEAARAFVQQVKSEHPTARHHCWAWVAGAPNNSQQLGFSDDGEPSGTAGKPMLAQLMGADIGEITAVVVRYYGGIMLGTGGLVKAYGGGVQQGLKQLPRQRKVPMTLFTLQCDYAQLSDIERLVQRFEGKVTDSQFQDRIALTLAVPYGQIDGFKKNLSDFSRGALSLIPLTP

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Crispr_ID: NZ_CP016889_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016889_6

2332994-2333328

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCNAGCGGGGATAAACCG	CRT
TGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

5 spacers

The CRISPR arrays of NZ_CP016889_6

>merge|NZ_CP016889|6|2332994-2333328|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCTAGCGGGGGTAAACCGCCTGGCAGCAGCAGCCGATGCTGCTGAAACTGCGTGTTCCCCGCGCTAGCGGGGATAAACCGGCCATTACTGATGCACTGGAGGGATTCCATGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTATTTCAGCAGGTGACAGGTAGGACATTTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTCTCAATTGTTCGGCAGCGTCGTAATCTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTGGTGTTGGCGTTCTGCTGTGACATGTTGGTATTCCCCACGCCAGAGGGGAATACACC

>NZ_CP016889|6|6|2332994-2333328|CRISPRCasFinder
GTGTTCCCCGCGCTAGCGGGGGTAAACCG	CCTGGCAGCAGCAGCCGATGCTGCTGAAACTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCCATTACTGATGCACTGGAGGGATTCCATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATTTCAGCAGGTGACAGGTAGGACATTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTCTCAATTGTTCGGCAGCGTCGTAATCTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGGTGTTGGCGTTCTGCTGTGACATGTTG
GTATTCCCCACGCCAGAGGGGAATACACC

>NZ_CP016889|6|1|2332994-2333328|CRT
GTGTTCCCCGCGCTAGCGGGGGTAAACCG	CCTGGCAGCAGCAGCCGATGCTGCTGAAACTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCCATTACTGATGCACTGGAGGGATTCCATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATTTCAGCAGGTGACAGGTAGGACATTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTCTCAATTGTTCGGCAGCGTCGTAATCTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGGTGTTGGCGTTCTGCTGTGACATGTTG
GTATTCCCCACGCCAGAGGGGAATACACC

>NZ_CP016889|6|1|2333053-2333267|PILER-CR
TGCGTGTTCCCCGCGCTAGCGGGGATAAACCG	GCCATTACTGATGCACTGGAGGGATTCCA
TGTGTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATTTCAGCAGGTGACAGGTAGGACATT
TGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTCTCAATTGTTCGGCAGCGTCGTAATC
TGTGTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016889.1\|WP_115064838.1\|2336281_2338879_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP016889.1\|WP_010253980.1\|2341909_2342773_-\|polyamine-aminopropyltransferase	unknown	unknown	gnl\|CDD\|234843
NZ_CP016889.1\|WP_010253944.1\|2325705_2328372_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP016889.1\|WP_069025832.1\|2343405_2345001_+\|multicopper-oxidase-CueO	unknown	unknown	gnl\|CDD\|236810
NZ_CP016889.1\|WP_069025831.1\|2339600_2340893_-\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|227721
NZ_CP016889.1\|WP_003854673.1\|2342875_2343223_-\|YacC-family-pilotin-like-protein	unknown	unknown	gnl\|CDD\|370620
NZ_CP016889.1\|WP_071941068.1\|2332055_2332235_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP016889.1\|WP_010253942.1\|2324837_2325602_+\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP016889.1\|WP_031593562.1\|2333397_2334297_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP016889.1\|WP_069025829.1\|2332261_2332687_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|374224
NZ_CP016889.1\|WP_069025830.1\|2334998_2335856_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293825
NZ_CP016889.1\|WP_010253950.1\|2330448_2331873_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP016889.1\|WP_010253939.1\|2322966_2324322_-\|aromatic-amino-acid-transporter-AroP	unknown	unknown	gnl\|CDD\|182324
NZ_CP016889.1\|WP_010253973.1\|2339069_2339447_+\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP016889.1\|WP_039386521.1\|2320399_2321359_-\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|226449
NZ_CP016889.1\|WP_010253935.1\|2321355_2322768_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_CP016889.1\|WP_039386527.1\|2328386_2330288_+\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP016889.1\|WP_010253978.1\|2341071_2341881_-\|adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|235480
NZ_CP016889.1\|WP_039391324.1\|2334402_2334912_+\|phenolic-acid-decarboxylase	unknown	unknown	gnl\|CDD\|368644
NZ_CP016889.1\|WP_155763525.1\|2324380_2324557_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016889.1\|WP_115064838.1\|2336281_2338879_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP016889.1\|WP_010253980.1\|2341909_2342773_-\|polyamine-aminopropyltransferase	gnl\|CDD\|234843	PRK00811, PRK00811, polyamine aminopropyltransferase.	1.5474e-180
NZ_CP016889.1\|WP_010253944.1\|2325705_2328372_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP016889.1\|WP_069025832.1\|2343405_2345001_+\|multicopper-oxidase-CueO	gnl\|CDD\|236810	PRK10965, PRK10965, multicopper oxidase; Provisional.	0
NZ_CP016889.1\|WP_069025831.1\|2339600_2340893_-\|glycoside-hydrolase	gnl\|CDD\|227721	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane].	4.32772e-53
NZ_CP016889.1\|WP_003854673.1\|2342875_2343223_-\|YacC-family-pilotin-like-protein	gnl\|CDD\|370620	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS). This family comprises lipoproteins from four gamma proteobacterial species: PulS protein of Klebsiella pneumoniae (P20440), the OutS protein of Erwinia chrysanthemi (Q01567) and Pectobacterium chrysanthemi, and the functionally uncharacterized E. coli protein EtpO. PulS and OutS have been shown to interact with and facilitate insertion of secretins into the outer membrane, suggesting a chaperone-like, or piloting function for members of this family. In the pilotin from this four-helix protein from enterohemorrhagic Escherichia coli, the straight helix alpha2, the curved helix alpha3 and the bent helix alpha4 surround the central N-terminal helix alpha1. These helices create a prominent groove, mainly formed by side chains of helices 1,2 and 3 suggesting this groove is important as a binding site.	2.85727e-08
NZ_CP016889.1\|WP_071941068.1\|2332055_2332235_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	1.50404e-18
NZ_CP016889.1\|WP_010253942.1\|2324837_2325602_+\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	7.55237e-170
NZ_CP016889.1\|WP_031593562.1\|2333397_2334297_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	7.53096e-32
NZ_CP016889.1\|WP_069025829.1\|2332261_2332687_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	1.67207e-65
NZ_CP016889.1\|WP_069025830.1\|2334998_2335856_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293825	cd07739, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.85168e-84
NZ_CP016889.1\|WP_010253950.1\|2330448_2331873_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP016889.1\|WP_010253939.1\|2322966_2324322_-\|aromatic-amino-acid-transporter-AroP	gnl\|CDD\|182324	PRK10238, PRK10238, aromatic amino acid transporter AroP.	0
NZ_CP016889.1\|WP_010253973.1\|2339069_2339447_+\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	1.09251e-61
NZ_CP016889.1\|WP_039386521.1\|2320399_2321359_-\|family-43-glycosylhydrolase	gnl\|CDD\|226449	COG3940, COG3940, Predicted beta-xylosidase [General function prediction only].	0
NZ_CP016889.1\|WP_010253935.1\|2321355_2322768_-\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	6.30081e-173
NZ_CP016889.1\|WP_039386527.1\|2328386_2330288_+\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP016889.1\|WP_010253978.1\|2341071_2341881_-\|adenosylmethionine-decarboxylase	gnl\|CDD\|235480	PRK05462, PRK05462, adenosylmethionine decarboxylase.	0
NZ_CP016889.1\|WP_039391324.1\|2334402_2334912_+\|phenolic-acid-decarboxylase	gnl\|CDD\|368644	pfam05870, PA_decarbox, Phenolic acid decarboxylase (PAD). This family consists of several bacterial phenolic acid decarboxylase proteins. Phenolic acids, also called substituted cinnamic acids, are important lignin-related aromatic acids and natural constituents of plant cell walls. These acids (particularly ferulic, p-coumaric, and caffeic acids) bind the complex lignin polymer to the hemicellulose and cellulose in plants. The Phenolic acid decarboxylase (PAD) gene (pad) is transcriptionally regulated by p-coumaric, ferulic, or caffeic acid; these three acids are the three substrates of PAD.	2.12528e-109

>NZ_CP016889.1|WP_069025829.1|2332261_2332687_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MFYPIAIEAGDHENAYGVIVPDLPGCFSAGDTLDEAIKNAKEAITGHIELCVELGHEIPAVSTIEALAANPDYQGYIWALVDVDVIRLLGGSEKINVTLPRSLIDRIDRCVASHPEYKSRSGFLAQVALERITAPINRPQK
>NZ_CP016889.1|WP_071941068.1|2332055_2332235_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MDSSTLISEMKADGWVLTRINGSHHHFTHPTKPGLVTVPHPKKDLPIGTVKSIRKQARI
>NZ_CP016889.1|WP_010253950.1|2330448_2331873_+|dihydrolipoyl-dehydrogenase
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVAKVIEEAKALEEHGIVFGQPSTDINKIRSWKEKVINQLTGGLSGMAKGRKVTVVNGLGKFTGANTLVVEGEGGATTINFDNAIIAAGSRPIELPFIPHEDPRVWDSTDALELKEVPKRLLVMGGGIIGLEMATVYHALGSEIDVVEMFDQVIPAADKDVVKVFTKKISKKFNLMLETKVTAVEAKDDGIYVSMEGKKAPGEAQRYDAVLVAIGRVPNGKGLDAGKAGVEVDDRGFIRVDKQMRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVISGLKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIFEGSITDLPNAKAKKK
>NZ_CP016889.1|WP_039386527.1|2328386_2330288_+|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MAIEIKVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGVVKEIKISTGDKVETGSLIMVFDAEGAAEAAPAAAEEKKADAAPAPAAAAATASKEVAVPDIGGDEVEVTEILVKVGDKVEAEQSLIVVEGDKASMEVPAPFAGVVKEITISTGDKVSTGSAIMVFEAEGAAPASDAKPEVKEEAASAPAAAAGAKDVNVPDIGGDEVEVTEILVKVGDKVEAEQSLIVVEGDKASMEVPAPFAGTVKELKVATGDKVSTGSLIMVFEVEGAAPAAPAAAKQEAAPAPAAKSEAKAAAPAPAKADSKGEFAENDAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILKEDVQTYVKEAVKRAEAAPAAASGGGLPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITDLEAFRKQQNAEAEKRKLDVKYTPVVFIMKAVAAALEQMPRFNSSLSEDAQKLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGITELSRELMAISKKARDGKLTAGDMQGGCFTISSLGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFTPRLMMPISLSFDHRVIDGADGARFITIIGNMLSDIRRLVM
>NZ_CP016889.1|WP_010253944.1|2325705_2328372_+|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSERLHNDVDPIETRDWLQAIESVIREEGVERAQYLIDQVLGAARKGGVNVAAGSSAISNYINSIAVEDEPDYPGNTSLERRIRSAIRWNAIMSVLRASKKDLELGGHMSSFQSSATIYEVCFNHFFRARSEKDGGDLVYFQGHISPGIYARAFLEGRLTEDQMNNFRQEVDGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLEHRGLKDTSAQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFIINCNLQRLDGPVTGNGKIINELEGIFAGAGWEVIKVIWGGRWDELLRKDTSGKLIQLMNETVDGDYQTFKSRDGAYVREHFFGKYPETAALVKDLSDDEIWALNRGGHDPKKIYAALKKAQDTKGKPVLILAHTIKGYGMGDTAEGKNIAHQVKKMNMDGVRYIRDRFNVPVADDKIESLPYVTFEKGSEEHTYLHGQREKLGGYLPTRQPKFTEKLEMPALEEFSALLDEQNKEISTTIAFVRALNVMLKNKSIKDRLVPILADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGSSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLMWLAGDQQARGFLVGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPSYAYEVAVIMHDGLVRMYGEAQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLETVDGSKGKVQLLGSGSILRHVREAAQILAKDYGIGSDVYSVTSFTELARDGQDCERWNMLHPTEEARVPYIAQVMNDAPAVASTDYMKLFAEQVRSYVPASDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIEKKVVADAITRFNIDADKVNPRLA
>NZ_CP016889.1|WP_010253942.1|2324837_2325602_+|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYSKIRQPKLSDAIEQQLESLIMEGTLRPGEKLLPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQENLWQSLSDPLVELLADHPESQFDLLETRHALEGIAAYYAALRGTEEDLLRIRDCHVNIQQAQDSGDLDAEADAVMQYQIAVTEAAHNVVLLHLLRSMGPMLEQNVRQNFELLYSRREMLAKVSGHRARIFEAIVAREPEKAREASHRHLAFIEEILLDRSREQSRRERSLRRLQQRKE
>NZ_CP016889.1|WP_155763525.1|2324380_2324557_-|hypothetical-protein
MAEVAMGRRDQDGVFSVNSQHERRKQVQSDSLITILVARVADGTIQHARYRKIINTLL
>NZ_CP016889.1|WP_010253939.1|2322966_2324322_-|aromatic-amino-acid-transporter-AroP
MEQQQGEALKRGLKNRHIQLIALGGAVGTGLFLGSASVIESAGPAVILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGNFAGFASGWNYWVLYVLVAMAELTAVGKYVQFWWPDFPTWASAAIFFVMINAINLTNVKVFGEMEFWFAIVKVVAVIGMILFGGWLLFSGHAGPQATVRNLWEQGGFFPHGIGGLVMVMAIIMFSFGGLELVGITAAEADNPEVSIPKATNQVLWRILIFYIGSLAVLLSLMPWTRVTSEVSPFVFIFHELGDAMVANALNVVILTAALSVYNSCVYCNSRMLFGLAQQGNAPKALLKVDRRGVPVLTILVSAVATALCVLINYLMPGEAFGLLMSLVVSALVINWAMISLAHLKFRRKKDQQGVTTRFKALLYPAGNWICLIFLAAILVLMATTPGMAISVWLIPVWLVILGVGYFIKNQTQKA
>NZ_CP016889.1|WP_010253935.1|2321355_2322768_-|MFS-transporter
MKGTALPFREKLGYGMGDAGCNMIGGAIMLFLNYFYTDVFGLAPALVGTLLLSVRVLDAVTDPIMGAIADRTQSRWGRFRPWLLWVSVPYVVFSVMMFTTPDWTYHNKVIWAFVTYFLMSLTYTAINIPYCSLGGVITNDPGERVSCQSYRFVMVGIATLILSLSLLPMAEWFGGEDKARGYQMAMAVLATIGLAMFLFCFATVRERIRPAVPSNDDLKKDLRDVWKNDQWVRILLLTFCNVCPGFIRMAATMYYVTWVMGQSTHFATLFISLGVIGMMVGSTLAKLLTDRWCKLKVFFWTNIALALFSSGFYWIDPHATVMVVVAYFVLNILHQIPSPLHWSLMADVDDYGEWKTGKRITGISFSGNLFFLKVGLAVAGAMVGFLLSIYGYNAGAKQQSPEAINGIMLLFTIIPGVGYLITAGVVRLMKVDRKMMITIQQDLALRRENFHELHTVRLRDGVVTPTGDVK
>NZ_CP016889.1|WP_039386521.1|2320399_2321359_-|family-43-glycosylhydrolase
MTAILPNPFIEQRADPFILRHEQYYYFVASVPEYDRLEIRRATTLAGLRSAEPVVVWRKPESGPFSELIWAPELHYIDGQWVIYFAAAPTREIKEGLFQHRMYALVCEAEDPLQGEWQPCRRVFSQFDSFSLDATHFVHQGKNWYLWAQKDPLIPGNSNLYLAELLNPWTLKGTPVMLSRPEYEWECAGFSVNEGPAVIRHGDRLFVTYSASATDENYCLGILSIAADADPLDVAAWQKSARPVFVSSWDNHQYGPGHNSFTQDEAGRDVLVYHARNYTEIEGDPLWDPNRHTRLKYFSWREDGTPDFGVPPADYTSVP
>NZ_CP016889.1|WP_031593562.1|2333397_2334297_-|LysR-family-transcriptional-regulator
MYKTTLEQWYLLDAVVNEGSFALAAEKNNRSQSSLSYQLSLLQQRLGLTLLQQEGRRAVLSAEGHQLLAQVRPLLEGFGALEAQASALQRGERSRIDLMVDATLPKPLLFDVLQTFQQRYPHVRIWFSEIVRSETPDRLAENQADLWLVAQYGDTPLAGESLMSVDFVAVAHRDHPLHRESAPLSAATLARWPCITILDRQQQQQSEVNGDQAENWSFTTLSAAIEAVQHQLGYGWLPEQNIAALLESGELRPLPLLQGRRRSSSLVMHMNEERLPGNSAIAALAQMFIERVAAWEMRG
>NZ_CP016889.1|WP_039391324.1|2334402_2334912_+|phenolic-acid-decarboxylase
MSTFDKHDLSGIVGKHLVYTYDNGWNYELYIKNASTIDYRIHSGMVGNRWVKNQHVYVVRLAQDVYKVSWTEPTGTDVSLAVNLADKIFHGTIFFPRWVMNNPEKTVCFQNDHLEEMAKFREAGPAYPTEVIDEFATLTVIRDVGENNESVIDCPPDQLPANFPDNLKN
>NZ_CP016889.1|WP_069025830.1|2334998_2335856_+|MBL-fold-metallo-hydrolase
MDLSTKVFISSDQHDGFGVSSTLIMGEKEAMLVDAQFTLANAHRLVAEIIETGLDLKRIFITHLHPDHFLGLEVIKSVFPDAEIFSYKQVAEDVNDAFDFKIDYWGKQVLKENGARTTFPITELEEDTIWLEGQQIKILSDLSGDCIRVTPLWIPSTKTLIASDVVFADAHVWIADMRTPERMAKWMESLDTLEALEPKVLIPGHSRITPSLSPSAIGFTRTYIKDFIKTLHKVNNSEELVQEMERIYPNLPVKICLDYSARILKDHYVWPGDWPESLREMKTTL
>NZ_CP016889.1|WP_115064838.1|2336281_2338879_+|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAQGIVPKPLEASQMAALVELLKNPPAGEEEFLIDLLVNRVPPGVDEAAYVKAGFLAAVAKGEATSPLISSEKAVELLGTMQGGYNIHPLIEALDDSKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWYLSRPELAEKITVTVFKVTGETNTDDLSPAQDAWSRPDIPLHALAMLKNAREGIEPDEAGNIGPIKQIEALKTKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPNVPNKKGGGVVLGSKIAPIFFNTMEDAGALPIEVDVNNLNMGDVIDIYPFKGEVRNHETNELLASFELKTEVVIDEVRAGGRIPLIIGRGLTTKARESLGLPHSTVFRQAKDVAESTRGFSLAQKMVGRACGVTGVRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSTDLVMQSFCHTAAYPKPVDVSTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMEPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELSDASAERSAAGCTIKLDKAPIIEYLSSNIVLLKWMIAEGYGDRRTLERRIEGMEKWLADPQLLEPDADAEYAAVIEIDLAEIKEPILCAPNDPDDARLLSDVQGEKIDEVFIGSCMTNIGHFRAAGKLLDSHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGSTVVSTSTRNFPNRLGNGANVYLASAELAAVASLLGKLPTPDEYQQFMAQVDKTASDTYRYLNFDQLTQYTDKADGVIFQTAV
>NZ_CP016889.1|WP_010253973.1|2339069_2339447_+|YacL-family-protein
MEYEFLRDVTGQIKVRMSMDHEAVGHWFNEEVKNDPGLLDEVEAAIEDVKGSVRQWQRIGSEYTILLDEEEVMIRANLLALEDDGMEEGMNYYDEESLSFCGIEDFQLVIAAYRQFMNQYGKPVR
>NZ_CP016889.1|WP_069025831.1|2339600_2340893_-|glycoside-hydrolase
MARINIIDFDAVPDATSLSTQAIQRAIDSAAEGDTVLIPAGRFLTGALFLKSEMTLELAKDAVLLGSQRLEDYPEIATRVAGIDMVWPSAMLNINQCRNVTVCGSGTLDGQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWNLHVCYSKQVNLQRLNVMNATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGTEAQQLARTARDIIIRDCTLLKGSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLMMEDVGYPFMLQLNWFPQYSYSEQPADTEQPSHWRKLAAGVTGDAGLTRVENIRISHISSSLTQPATFSRAFFIEGTPENPIEQLSFSDITLQAQEFGKIAGVNNLRFERVSVDAPVTTREENDAYTR
>NZ_CP016889.1|WP_010253978.1|2341071_2341881_-|adenosylmethionine-decarboxylase
MQKLKLHGFNNLTKSLSFCIYDICYANTEAERDGYIAYIDEQYNANRLTEILTETCSIIGANVLNIARQDYEPQGASVTILVSEEPIDPKDIDNSEHPGPLPNSVVAHLDKSHICVHTYPESHPAGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTVDYRVRGFTRDVKGMKHFIDHEINSIQNFMSEDMKAMYDMVDVNVYQENIFHTKMLLKEFDLKHYLFNTRPEDLTPQEHKRITDLLWKEMREIYYGRNIPSVGLKTL
>NZ_CP016889.1|WP_010253980.1|2341909_2342773_-|polyamine-aminopropyltransferase
MAHNETWYETLHAGFGQYFTVDKELYREKTAHQDLIIFENAAMGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGAAKSVLIIGGGDGAMLREVSRHPGIEKITMVEIDAGVVTFCRQYLPNHSAGAYDDPRFTLVIDDGVNFVNQTQEKFDVIISDCTDPIGPGESLFTSEFYAGCKAALNENGIFVAQNGVCFLQQDEAVNSHRKLGHYFADVSFYQAAIPTYYGGIMTFAWASDNPALRQLDTATLKARFEAAGLTCRYYTPAIHTGSFALPQYLLNALSAAC
>NZ_CP016889.1|WP_003854673.1|2342875_2343223_-|YacC-family-pilotin-like-protein
MKQSIRILLLTGLLGFSSTSFALSESEAEDLADLTAVFVYLKNDCGYQDLPDAQIRKALVFFAQQNRWDLSNYSNYNMKALGEDSYRDLSGIAITNDKKCKSLARDSLSLLAYVR
>NZ_CP016889.1|WP_069025832.1|2343405_2345001_+|multicopper-oxidase-CueO
MQRRHFLKLTAALSAAGALPLWSRSLMAATRPLLPIPSLLEPDARGSYSLTAMQGTTQWNGKAVPTWGYNGSLLGPVLKMQSGKPVTVNIHNRLSEATTLHWHGLEIPGAVDGGPQAVIAPGGSRQVSFTPDQPAATCWYHPHLHGKTGHQVAQGLAGLILLEDKESGTLRLPSQWGVDDVPLIFQDKQLTKDGSHIDYQLDVMRAAVGWFGDMMLTNGVHYPQHAVPRGWLRLRLLNGCNARSLHVAASDKRPLYVIASDGGLLAEPVKLDSLPILPGERFEVMIDTSDGKSFDLVTLPTEQMGMTLPPFDQPLPLVQILPLRVMASATLPDQLATLPALPSTDGLTTRWLQLMMDPQLDQQGMQALMQRYGEKAMGKGGHHTMPEKTAAEPMPPMENMASMDHSMHGNTPPAGYDFRNGNKINGQAFDMTKPSFAVKLGDYEKWTISGEGDAMLHPFHIHGTQFRILSENGKPPAPHRQGWKDMVNVDGWRSEVLVRFNYVAAAEHAYMAHCHLLEHEDTGMMLGFTVS

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Crispr_ID: NZ_CP016889_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016889_7

2610033-2610140

Orphan

Consensus_repeat	Method
GCGTTGTTCAAAAACGCTCCCGGCGTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016889_7

>merge|NZ_CP016889|7|2610033-2610140|CRISPRCasFinder
GCGTTGTTCAAAAACGCTCCCGGCGTTTTTAGTACGCACCTCATCCCTGAGGTGCGCCCGTAGCCGGGCCAACGCTTCGCGTTGTTCAAAAACGCTCCCGGCGTTTTT

>NZ_CP016889|7|7|2610033-2610140|CRISPRCasFinder
GCGTTGTTCAAAAACGCTCCCGGCGTTTTT	AGTACGCACCTCATCCCTGAGGTGCGCCCGTAGCCGGGCCAACGCTTC
GCGTTGTTCAAAAACGCTCCCGGCGTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016889.1\|WP_010671234.1\|2620218_2620665_-\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501
NZ_CP016889.1\|WP_031592155.1\|2610263_2611958_-\|Kef-family-K(+)-transporter	unknown	unknown	gnl\|CDD\|182633
NZ_CP016889.1\|WP_069025899.1\|2599297_2601382_+\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|236138
NZ_CP016889.1\|WP_031592161.1\|2601437_2601770_+\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_CP016889.1\|WP_064704609.1\|2616340_2617144_-\|TraB/GumN-family-protein	unknown	unknown	gnl\|CDD\|226258
NZ_CP016889.1\|WP_031592157.1\|2607507_2608467_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|234585
NZ_CP016889.1\|WP_010671230.1\|2614820_2615690_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP016889.1\|WP_003850420.1\|2601769_2602375_+\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_CP016889.1\|WP_022626100.1\|2614299_2614731_-\|multidrug/biocide-efflux-PACE-transporter	unknown	unknown	gnl\|CDD\|226610
NZ_CP016889.1\|WP_031592149.1\|2619826_2620231_+\|Cu(I)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182320
NZ_CP016889.1\|WP_069025902.1\|2615686_2616166_-\|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK	unknown	unknown	gnl\|CDD\|182634
NZ_CP016889.1\|WP_069025900.1\|2602472_2604347_+\|molecular-chaperone-HtpG	unknown	unknown	gnl\|CDD\|235366
NZ_CP016889.1\|WP_010255933.1\|2605759_2606620_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016889.1\|WP_022626103.1\|2604703_2605573_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP016889.1\|WP_069025901.1\|2612498_2614265_+\|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|236566
NZ_CP016889.1\|WP_010255936.1\|2608525_2609827_+\|inosine/guanosine-kinase	unknown	unknown	gnl\|CDD\|185033
NZ_CP016889.1\|WP_010671225.1\|2606749_2607394_+\|adenylate-kinase	unknown	unknown	gnl\|CDD\|234711
NZ_CP016889.1\|WP_010259065.1\|2620664_2621579_-\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP016889.1\|WP_031592164.1\|2598587_2599139_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP016889.1\|WP_069025903.1\|2617215_2619729_-\|copper-exporting-P-type-ATPase-CopA	unknown	unknown	gnl\|CDD\|182635

Protein	Function_ID	Function_description	E-value
NZ_CP016889.1\|WP_010671234.1\|2620218_2620665_-\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	8.31144e-34
NZ_CP016889.1\|WP_031592155.1\|2610263_2611958_-\|Kef-family-K(+)-transporter	gnl\|CDD\|182633	PRK10669, PRK10669, putative cation:proton antiport protein; Provisional.	0
NZ_CP016889.1\|WP_069025899.1\|2599297_2601382_+\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP016889.1\|WP_031592161.1\|2601437_2601770_+\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	2.90884e-45
NZ_CP016889.1\|WP_064704609.1\|2616340_2617144_-\|TraB/GumN-family-protein	gnl\|CDD\|226258	COG3735, COG3735, Uncharacterized protein conserved in bacteria [Function unknown].	7.70609e-76
NZ_CP016889.1\|WP_031592157.1\|2607507_2608467_+\|ferrochelatase	gnl\|CDD\|234585	PRK00035, hemH, ferrochelatase; Reviewed.	1.68491e-157
NZ_CP016889.1\|WP_010671230.1\|2614820_2615690_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.97409e-40
NZ_CP016889.1\|WP_003850420.1\|2601769_2602375_+\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	2.33658e-119
NZ_CP016889.1\|WP_022626100.1\|2614299_2614731_-\|multidrug/biocide-efflux-PACE-transporter	gnl\|CDD\|226610	COG4125, COG4125, Predicted membrane protein [Function unknown].	1.62938e-54
NZ_CP016889.1\|WP_031592149.1\|2619826_2620231_+\|Cu(I)-responsive-transcriptional-regulator	gnl\|CDD\|182320	PRK10227, PRK10227, HTH-type transcriptional regulator CueR.	1.41279e-74
NZ_CP016889.1\|WP_069025902.1\|2615686_2616166_-\|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK	gnl\|CDD\|182634	PRK10670, PRK10670, Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK.	1.18178e-104
NZ_CP016889.1\|WP_069025900.1\|2602472_2604347_+\|molecular-chaperone-HtpG	gnl\|CDD\|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_CP016889.1\|WP_069025901.1\|2612498_2614265_+\|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase	gnl\|CDD\|236566	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed.	0
NZ_CP016889.1\|WP_022626103.1\|2604703_2605573_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	7.08827e-69
NZ_CP016889.1\|WP_010255936.1\|2608525_2609827_+\|inosine/guanosine-kinase	gnl\|CDD\|185033	PRK15074, PRK15074, inosine/guanosine kinase; Provisional.	0
NZ_CP016889.1\|WP_010671225.1\|2606749_2607394_+\|adenylate-kinase	gnl\|CDD\|234711	PRK00279, adk, adenylate kinase; Reviewed.	9.9803e-136
NZ_CP016889.1\|WP_010259065.1\|2620664_2621579_-\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	1.76379e-76
NZ_CP016889.1\|WP_031592164.1\|2598587_2599139_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	2.38217e-99
NZ_CP016889.1\|WP_069025903.1\|2617215_2619729_-\|copper-exporting-P-type-ATPase-CopA	gnl\|CDD\|182635	PRK10671, copA, copper-exporting P-type ATPase CopA.	0

>NZ_CP016889.1|WP_010255936.1|2608525_2609827_+|inosine/guanosine-kinase
MKFPGKRKSKHYFPVSARDPLLQPAQHDVDAGSWVVGIDQTLVDIEAKVDDAFLARYGLSAGHSLVIDNAVAEALYNELMQEALITHQFAGGTIGNTLHNFSVLADDRSVLLGVMCNNIQIGGYAYRYLCNTSSRVDLNYLQGVDGAIGRCFTLIGEHGERTFAISPGQMNQLHPDNVPEEVIAGASALVLTSYLVRCAEGEPMPQATLRAIEYAKRHNVPVVLTLGTKHVIGDNPQFWRDFLREHVSIVAMNEEEALALTGESDPLLAANMALDWVDLVLCTAGPIGLYMAGYTEEEFKRKTNHPLLPGAIAEFNQYEFSRVMRQQDCQQPLRIFSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANNYHSLNVPNSSKHARPYLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR
>NZ_CP016889.1|WP_031592157.1|2607507_2608467_+|ferrochelatase
MRQDKPGVLLVNLGTPDAPTTPAVKRYLKQFLSDPRVVDAPRWLWWPVLNAVILPFRSPRVSKLYASVWMEGGSPLLVYSMRQRDALAARVDMPVELGMSYGNPSLKSAVDKLMAQGVTRLIVLPLYPQFSCSTVAAVWDGLTAVFKDYRSLPDVQFIRDYAEHPAYIAALKATVERSFERHGQPDLLVLSFHGIPQRFANEGDDYPQRCADTTAALVKALGLRDDQYMMTFQSRFGREPWLMPYTDKTMESLPAKGIKHVQVMSPGFSSDCLETLEEISGENCEIFMHAGGEKFEYIPALNADEAHIDMMVQLVDARR
>NZ_CP016889.1|WP_010671225.1|2606749_2607394_+|adenylate-kinase
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGNQAKAIMDAGKLVTDELVIALVKERITQEDCKNGFLLDGFPRTIPQADAMKEAGITVDHVLEFAVPDELIVERIVGRRVHTPSGRVYHVTFNPPKVEGKDDVTGEELTMRKDDQEETVRKRLVEYHQMTAPLIAYYSKEAEAGNTAYHKIDGTRKVTEVSAELAKILG
>NZ_CP016889.1|WP_010255933.1|2605759_2606620_+|hypothetical-protein
MAHRSLSSETSAEARHRLRLALSRFYRLEQFDLFFAPSLHVAQVLLSQLFLRQEQARNQHRYASHFPVTELNILPAVPLIAGSIMLVPHVELPNGRVRPLRDCQNQGVTEASESFASVLHQKLIDEAHLFVTRLDRHAEICSDLVLVALRTHDFSTLVRSELRLFEQGLTLTATHEALRRFDDPHWRPYNAATVDALSLSDPLPLNSCHQPGLPFASFNVPASVITSLSDAEDVVKWPQQARLLLNANVRGSGKKSVNMTHHLSRRLQFLLGSGGKSEKASGRPGG
>NZ_CP016889.1|WP_022626103.1|2604703_2605573_-|LysR-family-transcriptional-regulator
MNGLPPLRALHYFHQAALHSSFSVAAEHLHVTHSAISHQIRQLESWMGKPLFVRSHGRVKLTSHGERLLLSCQQAFSELRSSCESIRTGLLQQIRVSCAPSFLSQWLIPRIASFYQRYPEIEVHFQPLTQISQLRSEHVDVLILSHGEPPESDIDATLVSEDEIGPLCAPHFASQLRVGEDLAAMPLLHADTRLHAWSEWADKAGVSGRFNGGKHFESLTLGIQAARSGLGVLMAPRLLVRKELEDGTLLAPLGFVRVERATWMMTKQSRRHDTEISLFRDWLQDAAKP
>NZ_CP016889.1|WP_069025900.1|2602472_2604347_+|molecular-chaperone-HtpG
MTMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSDSSLYEGDGELHVRLSVDKDNRTITLSDNGIGMRRDEVIENLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGASAEEGVFWESAGEGEYTLAEIEKADRGTEITLHLREGEDEFLDAWRVRNIISKYSDHIALPVEIESKDEEGEGTHWEKINKAQALWTRNKSEISDEEYNEFYKHIAHDYSDPVAWSHNRVEGKQEYTSLLYIPARAPFDMWNRDQKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSNDLPLNVSREILQDSRVTQSLRAALTKRTLQMLEKLAKDDNEKYQTFWNEFGLVLKEGPAEDHANQETIAKLLRFATTQSEGSAQTISLEDYVSRMVEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFDGKTFQSVSKADESLSKLADEETEEQKEAEKALEPFVERVKTLLGERVKEVRLTHRLTDTPAIVTTDANEMTTQMAKLFAAAGQEVPEVKYLFEINPDHPLVKRVADTQDEARFGEWIELLLDQALLAERGTLEDPNQFIRRMNQLLTA
>NZ_CP016889.1|WP_003850420.1|2601769_2602375_+|recombination-protein-RecR
MQTSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPADIGLDRLEQRLESETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELEMVDGTTLSHSLAGRQKFKF
>NZ_CP016889.1|WP_031592161.1|2601437_2601770_+|YbaB/EbfC-family-nucleoid-associated-protein
MFGGKGGLGNLMKQAQQMQDKMARVQEEIAAIEVTGESGAGLVKVTINGAHNCRRVEVDPSLLEDDKDMLEDLIAAAFNDAARRIDETQKEKMASVSSGMQLPPGFKMPF
>NZ_CP016889.1|WP_069025899.1|2599297_2601382_+|DNA-polymerase-III-subunit-gamma/tau
MSYQVLARKWRPQAFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAKGLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPSHVKFLLATTDPQKLPVTILSRCLQFHLKALDVDQIRQQLEHVLKQEQIESETRALQLLARAADGSMRDALSLTDQAIAMGQGAVTSSTVSVMLGTLDDEQPLGLLEALVDGDGQQVMNLLSQAASRGVEWEALLVEMLRLLHQIAMVQLLPTSLNDDDESNALRLRELARVVPPADLQLYYQTLLMGRKDLPIAPDRRMGVEMTLLRALAFHPKAAVAEPIARPALTQQTAPVAPAQTSPAASGPSPLARQPAAQPASPSPAAAPPSHTASPVAQQMPEQTQQQVAAQPQMAAPDAAPQHSPSPDAAPDTALSSSTSQLLQARTQLLRQGANKPKKREPAAPGARPANSALERLASVTERSQQRIRDREPAAPVKEEAYRWKAVNQPVEVAEPVATPKALRSALEHEKTPELAARLAEEAQQRDPWAAEIAILPLPKLVQQLALNAWKETTESGVCLHLRSSQRHLNSPSAQQVLSDALSEHAGQRVELSVVEDDNSSVLTPLEWRQAIYEEKLAQARQSITCDTHIQTLQRFFDADLDEESIRPV
>NZ_CP016889.1|WP_031592164.1|2598587_2599139_+|adenine-phosphoribosyltransferase
MTDTAQQLEFIKNSIKSIPDYPKPGILFRDVTSLLEDPKAYAASIALLVERYRNKGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPREVYSESYELEYGTDKLELHKDAIQPGDLVLVVDDLLATGGTIEATVKLIRRAGGEVKDAAFIINLFDLTGETRLNALGVESYSLVKFPGH
>NZ_CP016889.1|WP_031592155.1|2610263_2611958_-|Kef-family-K(+)-transporter
MHHTTPLITTIVGALVLAFLLGMLANRLRISPLVGYLMAGVMAGPFTPGFVADTNLAPELAELGVILLMFGVGLHFSMKDLMSVKSIAIPGAIAQIAVATLLGMGLSWTLGWSWMTGLVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAIAGMMEQGNASAGLLAWDLLWTIGKVAAFMVLMMVVGRRAVPWILARSAATGSRELFTLAVLALALGIAFGAVEFFDVSFALGAFFAGMVLNESELSHRAARDTLPLRDAFAVLFFVSVGMLFDPSILVTQPLAVLGALVIIVVGKSVAAWLLVSLLGHSRRTALTISVSLAQIGEFAFILAGLGISLGLLTDEGRNLVLAAAILSIMLNPILFSLLERFLAKTETMEEQTLEEAIEDEKQIPVDFCNHAVIVGYGRVGSLIGQKLLEANVPLVVVENSRARVEALRERGIKAVLGNAARADTMELARLDCARWLLLTIPNGYEAGEVVTAAREKHQNIEIIARAHYDDEVEYIMERGATRVVMGEREIASSMLQILQDEMTQGEDLKPCDVVR
>NZ_CP016889.1|WP_069025901.1|2612498_2614265_+|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase
MLLSKWTGAGVALLVALMPLFSQAAQADRTYRFSLLHTNDEHGHFWFTEQGEYGLAAQKTLMDTMRYDVQSRGGGALILSAGDVNTGVPESDELDAEPDFRAMNLIGYDAMALGNHEFDKPIAILRKQEKWARFPLLAANVYQKSTGQRLFKPWAVFNRLGLKIAVVGLITPDTAKLANPAGLTDTEFRDPIAEAEKAVAELRATEKPDVIVALTHLGHYDDGKHGSNGIDDVTLARSLPAGTIDLIVGGHSHDAVCMEKENVSVKNYQPGQPCKPDQQNGIWIMQADKWGKYVGRGDFTFRNGQVTLEAYQLVPVNLKHKIKNADGSETWLTWQEEIPKNTAMMKLLMPFQKRAEAKLTVNVGSADGSFSGEKEQVRFEQTNLGQLILRAQMAHTKADFAVMSGGGIRTSLKSGKLSWRDLLQVQPFGNQVVSVSLTGAEIKKYLDVVANIQPDSGGYAQFAGISLTADGKQVSDVSINGKPLQDAQHYRMATNSFNAAGGDGYPRLDNHAGYLNSGAVDAQVLRDWIKTHSPVKASDYQPKGQIVHLSDEQIRARDEAAEKARKRNYPKMILAWIWPWGNETAATH
>NZ_CP016889.1|WP_022626100.1|2614299_2614731_-|multidrug/biocide-efflux-PACE-transporter
MRTRSLKERILHAVCFETLAILTVSPLAAWAMNKPLFQMGSLAIMLSTVAMLWNMIYNSGFDRLYAPGQKRGPGVRVLHALGFEGGFILIGLPIAAWMLDISLGQAFLVEVAFFLFFLPYTMAYNWVWDKLRERWIRRHPCRA
>NZ_CP016889.1|WP_010671230.1|2614820_2615690_+|LysR-family-transcriptional-regulator
MRYSPESLEAFMQTVASGSFSAAARALGKSQSTISAAVASLEDDLGFALFERAGRQPVLTEQGRRVIPQVQQILAASERLDALAIRLSQGVEPRLSFAMSDFWQTDHHEHLLRQFDARYPEIELEVMIAEDGDVLDLLQAGRVHLGVVRAQPNLPVDIAVARLQVEAQMAVFLHRDHPLAQLKTLSESELEGVRHLRLNTWVEASEPAPMGRIWSAPTYLLLLEMAEQGFGWTILPRWLVKQFGHGVLKELSMPGWPQHIAIEVVWSRRTPPGPAGRWMIDQLCAQPRV
>NZ_CP016889.1|WP_069025902.1|2615686_2616166_-|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK
MTPAVKLLEKQKVSFTLHPYEHDSNETHFGDEAVRKLNLDARQVYKTLLVALNGEAKQLAVAITPVSTQLDLKKVAKALGAKKADMADPQLAQRVTGYLVGGISPLGQKKRLPTVIDHSASAFDAMFISGGKRGLDIELAPQDLSRLLDAPFADIARHD
>NZ_CP016889.1|WP_064704609.1|2616340_2617144_-|TraB/GumN-family-protein
MTGNIWRSLRGFISQLFPASYRWPAMDVRLGDRQLHLVGSIHMGTRDMQPLPARLLRQLQQADALIVEADITQGGSPFDHHGDRPALSTRLDSHAMQTLTALCQEMSLNLSLFDNLPAWQVALMLQAQQAQRLGLRPDYGIDYQLLQAAKGLNKPVIELEGAEAQIALLTALPDDGMALLQDTLLHWHTNARLLQMMVSWWLDTPPRQPEITLPATFSQALNDTLIGQRNAQWRDRLQGLSAGNYVVAVGALHLYGEDNLPEMLKKP
>NZ_CP016889.1|WP_069025903.1|2617215_2619729_-|copper-exporting-P-type-ATPase-CopA
MSHTISLALDGLSCGHCVKRVKEALEQRDDVDQADVTQQEAQVSGHADAAALIATVEQAGYHATLKAADASPKSEPLTASEPPPEALTTESASRPAETTLPTHMLLIEGMTCASCVSRVEKALQQVAGVSQARINLGERSALVLGDADPQQLVAAVDAAGYGAQVVDDEQERREKQQLSARSAMRRFSWQAAVALAFGVPLMIWGMVGDNMMLTDHTHGVWLTLGIVTLLIMIVTGSHFYRSAWRSLRNGSATMDTLVALGTGAAWIYSFSVVLWPDFFPQQARHLYFEASVMILGLINLGHALEQRARQRSSKALERLLDLTPAQARQVDQQGDRLIPVSEVQPGMTLRLVTGDRVPVDGEIATGEAWFDEAMLTGEAVPQSKTPGAAIFAGTLVQDGSVEFIARATGNHTTLSRIIRLVRQAQSSKPDVGRLADRISAVFVPVVVLIALLSGAVWYLFGPQPQIAYMLVIATTVLIIACPCALGLATPMSIIAGVGRAAELGVLVRDADALQRASQIDTLVFDKTGTLTAGKPQVSDVQVWGDATRESVLATAAALEFASGHPLAKAIVAEAKLTQPPLLAQFRTIRGKGVSGSLDGRTLLLGNAALMQDNGVDYQAAEAEIARLTQQGTTPVLLAEQGQLTGLIALRDQLRPESGAALKRLHQQGFRLIMLTGDHENTARAIAAEVGIDEVIAGVMPEGKAAAIEQLQQQGRRVAMVGDGINDAPALAQADVGIAMGGGSDVAVETAGITLMRADLNSVADALALSSATLRNIRQNLFGAFIYNSIGIPVAAGVLYPLTGTLLSPIVAGAAMALSSITVVSNANRLLRYRPPRE
>NZ_CP016889.1|WP_031592149.1|2619826_2620231_+|Cu(I)-responsive-transcriptional-regulator
MNISDVAKKTGLTSKAIRFYEEKGVVTPPLRSENGYRSYNGHHLEELNLLRQARQVGFTLDECRELVALFNNPSRHSADVKARTLQKADEIAAHIEELHVMRARLLALAEACPGDDGAECPIINNLAGCGGQRG
>NZ_CP016889.1|WP_010671234.1|2620218_2620665_-|NfeD-family-protein
MLVDIIAHPHWFWLTLGGLLLAAEMLGTSGYLLWSGLAAVIVGLIEWFVPVSWTAQGSLFAVLTLICVFLWYRWMRHREARQKPNALNQRGSQMIGLQLTLDTALHNRTGHVRIGDSSWRVEAEQDLPAGTAVVVTGIEGITLRIQPR
>NZ_CP016889.1|WP_010259065.1|2620664_2621579_-|SPFH/Band-7/PHB-domain-protein
MITVIPALIILALVAVWATVKIVPQGFQWTVERFGRYTRTLQPGLSLVVPFMDRVGRKINMMEQVLDIPSQEIISKDNANVTIDAVCFIQVVDPARAAYEVSNLEQAILNLTMTNMRTVLGSMELDEMLSQRDSINTRLLHIVDEATNPWGVKITRIEIRDVRPPQELIGAMNAQMKAERTKRADILTAEGVRQAAILRAEGDKQSQILKAEGERTSAFLQAEARERQAEAEANATKMVSEAIASGDIQAINYFVAQKYTDALQKIGEANNSKVVMMPLEASSLLGSIAGIGELLKESRTESKR

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Crispr_ID: NZ_CP016889_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016889_8

4157827-4157918

Orphan

Consensus_repeat	Method
AAGTGAGTTTCATTGATGCGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016889_8

>merge|NZ_CP016889|8|4157827-4157918|CRISPRCasFinder
AAGTGAGTTTCATTGATGCGCCTTCGGTGGCGGATGTCGATGCCGGACTGTCTCCGCCGGTGCCAGGATAAGAGAGTTTCATTGATGCGCCT

>NZ_CP016889|8|8|4157827-4157918|CRISPRCasFinder
AAGTGAGTTTCATTGATGCGCCT	TCGGTGGCGGATGTCGATGCCGGACTGTCTCCGCCGGTGCCAGGAT
AAGAGAGTTTCATTGATGCGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016889.1\|WP_064690161.1\|4153370_4154255_-\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441
NZ_CP016889.1\|WP_069026520.1\|4161879_4162956_-\|carbon-phosphorus-lyase-complex-subunit-PhnI	unknown	unknown	gnl\|CDD\|377563
NZ_CP016889.1\|WP_010247776.1\|4156158_4156989_-\|phosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226164
NZ_CP016889.1\|WP_010247750.1\|4145623_4146367_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP016889.1\|WP_069026518.1\|4154251_4155112_-\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441
NZ_CP016889.1\|WP_010670886.1\|4158440_4159577_-\|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase	unknown	unknown	gnl\|CDD\|237967
NZ_CP016889.1\|WP_010670880.1\|4148139_4149120_-\|ribose-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226633
NZ_CP016889.1\|WP_031591070.1\|4149130_4150645_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP016889.1\|WP_069026614.1\|4164921_4165551_+\|Vat-family-streptogramin-A-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_CP016889.1\|WP_069026521.1\|4165927_4166755_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|238182
NZ_CP016889.1\|WP_010247802.1\|4163530_4163977_-\|phosphonate-C-P-lyase-system-protein-PhnG	unknown	unknown	gnl\|CDD\|377702
NZ_CP016889.1\|WP_010247799.1\|4162955_4163531_-\|phosphonate-C-P-lyase-system-protein-PhnH	unknown	unknown	gnl\|CDD\|236655
NZ_CP016889.1\|WP_069026517.1\|4150792_4153417_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP016889.1\|WP_069026519.1\|4160287_4161049_-\|phosphonate-C-P-lyase-system-protein-PhnK	unknown	unknown	gnl\|CDD\|183280
NZ_CP016889.1\|WP_022624938.1\|4159573_4160287_-\|phosphonate-C-P-lyase-system-protein-PhnL	unknown	unknown	gnl\|CDD\|227118
NZ_CP016889.1\|WP_010247805.1\|4163976_4164690_-\|phosphonate-metabolism-transcriptional-regulator-PhnF	unknown	unknown	gnl\|CDD\|182227
NZ_CP016889.1\|WP_069026516.1\|4146367_4147066_-\|D-lyxose/D-mannose-family-sugar-isomerase	unknown	unknown	gnl\|CDD\|377827
NZ_CP016889.1\|WP_010247794.1\|4161038_4161887_-\|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ	unknown	unknown	gnl\|CDD\|226154
NZ_CP016889.1\|WP_010247773.1\|4155205_4156132_-\|phosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|132472
NZ_CP016889.1\|WP_010247755.1\|4147110_4148049_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380544

Protein	Function_ID	Function_description	E-value
NZ_CP016889.1\|WP_064690161.1\|4153370_4154255_-\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	1.86386e-82
NZ_CP016889.1\|WP_069026520.1\|4161879_4162956_-\|carbon-phosphorus-lyase-complex-subunit-PhnI	gnl\|CDD\|377563	pfam05861, PhnI, Bacterial phosphonate metabolism protein (PhnI). This family consists of several Proteobacterial phosphonate metabolism protein (PhnI) sequences. Bacteria that use phosphonates as a phosphorus source must be able to break the stable carbon-phosphorus bond. In Escherichia coli phosphonates are broken down by a C-P lyase that has a broad substrate specificity. The genes for phosphonate uptake and degradation in E. coli are organized in an operon of 14 genes, named phnC to phnP. Three gene products (PhnC, PhnD and PhnE) comprise a binding protein-dependent phosphonate transporter, which also transports phosphate, phosphite, and certain phosphate esters such as phosphoserine; two gene products (PhnF and PhnO) may have a role in gene regulation; and nine gene products (PhnG, PhnH, PhnI, PhnJ, PhnK, PhnL, PhnM, PhnN, and PhnP) probably comprise a membrane-associated C-P lyase enzyme complex.	0
NZ_CP016889.1\|WP_010247776.1\|4156158_4156989_-\|phosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	6.62346e-113
NZ_CP016889.1\|WP_010247750.1\|4145623_4146367_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.74979e-72
NZ_CP016889.1\|WP_069026518.1\|4154251_4155112_-\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	9.37151e-86
NZ_CP016889.1\|WP_010670886.1\|4158440_4159577_-\|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase	gnl\|CDD\|237967	PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional.	0
NZ_CP016889.1\|WP_010670880.1\|4148139_4149120_-\|ribose-ABC-transporter-permease	gnl\|CDD\|226633	COG4158, COG4158, Predicted ABC-type sugar transport system, permease component [General function prediction only].	3.36315e-160
NZ_CP016889.1\|WP_031591070.1\|4149130_4150645_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP016889.1\|WP_069026614.1\|4164921_4165551_+\|Vat-family-streptogramin-A-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	1.02171e-73
NZ_CP016889.1\|WP_069026521.1\|4165927_4166755_-\|universal-stress-protein	gnl\|CDD\|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	1.77506e-14
NZ_CP016889.1\|WP_010247802.1\|4163530_4163977_-\|phosphonate-C-P-lyase-system-protein-PhnG	gnl\|CDD\|377702	pfam06754, PhnG, Phosphonate metabolism protein PhnG. This family consists of several bacterial phosphonate metabolism protein PhnG sequences. In Escherichia coli, the phn operon encodes proteins responsible for the uptake and breakdown of phosphonates. The exact function of PhnG is unknown, however it is thought likely that along with six other proteins PhnG makes up the the C-P (carbon-phosphorus) lyase.	2.97194e-66
NZ_CP016889.1\|WP_010247799.1\|4162955_4163531_-\|phosphonate-C-P-lyase-system-protein-PhnH	gnl\|CDD\|236655	PRK10147, phnH, phosphonate C-P lyase system protein PhnH.	5.60955e-77
NZ_CP016889.1\|WP_069026517.1\|4150792_4153417_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	2.57586e-90
NZ_CP016889.1\|WP_069026519.1\|4160287_4161049_-\|phosphonate-C-P-lyase-system-protein-PhnK	gnl\|CDD\|183280	PRK11701, phnK, phosphonate C-P lyase system protein PhnK; Provisional.	4.42905e-180
NZ_CP016889.1\|WP_022624938.1\|4159573_4160287_-\|phosphonate-C-P-lyase-system-protein-PhnL	gnl\|CDD\|227118	COG4778, PhnL, ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	5.35675e-133
NZ_CP016889.1\|WP_010247805.1\|4163976_4164690_-\|phosphonate-metabolism-transcriptional-regulator-PhnF	gnl\|CDD\|182227	PRK10079, PRK10079, phosphonate metabolism transcriptional regulator PhnF; Provisional.	2.69762e-157
NZ_CP016889.1\|WP_069026516.1\|4146367_4147066_-\|D-lyxose/D-mannose-family-sugar-isomerase	gnl\|CDD\|377827	pfam07385, Lyx_isomer, D-lyxose isomerase. Members of this family of sugar isomerases belong to the cupin superfamily. The enzyme from Cohnella laevoribosii has been shown to be specific for D-lyxose, L-ribose, and D-mannose. E. coli sugar isomerase (EcSI) has been structurally and functionally characterized and shows a preference for D-lyxose and D-mannose.	9.89812e-137
NZ_CP016889.1\|WP_010247794.1\|4161038_4161887_-\|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ	gnl\|CDD\|226154	COG3627, PhnJ, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism].	0
NZ_CP016889.1\|WP_010247773.1\|4155205_4156132_-\|phosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|132472	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein. This model is a subset of the broader subfamily of phosphate/phosphonate binding protein ABC transporter components, TIGR01098. In this model all members of the seed have support from genomic context for association with pathways for the metabolims of phosphonates, particularly the C-P lyase system, GenProp0232. This model includes the characterized phnD gene from E. coli. Note that this model does not identify all phnD-subfamily genes with evident phosphonate context, but all sequences above the trusted context may be inferred to bind phosphonate compounds even in the absence of such context. Furthermore, there is ample evidence to suggest that many other members of the TIGR01098 subfamily have a different primary function.	2.70972e-103
NZ_CP016889.1\|WP_010247755.1\|4147110_4148049_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380544	cd06321, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	2.82871e-127

>NZ_CP016889.1|WP_010247776.1|4156158_4156989_-|phosphonate-ABC-transporter-ATP-binding-protein
MAQALLKTVVDNDLPPASLSGQKVLSVQKLSKAYGDTQVLDQVSFDLHAGELVAVIGRSGAGKSTLLHMLNGTIEATSGAIISLHHGEADRNVVTLNSRQLREWRSQCGMIFQDFCLVPRLDVLTNVLLGRLSQTGTLKSFFKIFSDNDRAHAIELLQWMNMLPQALQRAENLSGGQMQRVAICRALMQNPKILLADEPVASLDPKNTKRIMDVLRQVSEQGISVMVNLHSIELVKSYCTRVIGIQRGVVLFDGHPSGLTDSLLHQLYGDELNQIH
>NZ_CP016889.1|WP_010247773.1|4155205_4156132_-|phosphonate-ABC-transporter-substrate-binding-protein
MKLTSLALLTSVMAFGVSAADAPKQLNLGILGGQNATQQIGDNQCVKTFFDKELGVDTQMRNASDYSGVIQGLLGGKIDMVLSMSPASFASVYIQDPKAVDVVGIVVDDKDQSRGYHSVVIVKADSPYKKLEDLKGKSFGMADPDSTSGFLMPNQAFKKMFGGSVDDKYNNTFSSVTFSGGHEQDILGVLNNQFDGAVTWTSLVGDYNSGYTSGAFGRLIRMDHPDLMKQIRIIWQSPLIPNGPVLVSNKLPADFKAKVVSAIKKLDKEDHACFVKAVGGEQHIGQATVADYQNIIDMKRDLMKGSRG
>NZ_CP016889.1|WP_069026518.1|4154251_4155112_-|phosphonate-ABC-transporter,-permease-protein-PhnE
MTEFEHYYQRIRRQQKRDTLLWSLLLVALYLAAGRVAEFNLLTVWQSLPHFFDYLHEILPVLHLPLLFADGKTEGSLAWWGYRLPIQLPLIWETLQLALASTLVAVALAAMLAFFAADNTQTPVSVRMTIRAFVAFLRTMPELAWAVMFVMAFGIGAIPGFLALALHTVGSLTKLFYEAIESASDKPVRGLAACGASKLQRMRFAFWPQVKPVFLSYSFMRLEINFRSSTILGLVGAGGIGQELMTNIKLDRYDQVSITLLLILIVVSLLDTLSGQLRRRVTGDRT
>NZ_CP016889.1|WP_064690161.1|4153370_4154255_-|phosphonate-ABC-transporter,-permease-protein-PhnE
MISTVPDIALMKQQHRELFAAQPRYLRRLALITLAVLLYYLFFFSVFGLEWSRLLMGCQQLGRYFLRMFVWHDFLNWPFGYYLSQVGITLGIVFAGTLTASLLALPLSFLAARNVMHSRTAKPLAFLMRRLFDLLRGIDMAIWGLIFVRAVGMGPLAGVLAIILQDVGLLGKLYAEGHEAVERSPGRGLGAVGANSLQKHRFGIFTQSFPQFLALSLYQIESNTRSAAVLGFVGAGGVGLVYAENMRLWNWDVVMFLTLILVVVVMVMDVISSRLRKRYISGKPVPLWQPAARD
>NZ_CP016889.1|WP_069026517.1|4150792_4153417_+|response-regulator
MQRTYPWQAGARGRLLLFNLLVVSVTLMVSVVAIFGFRHAGAIQEQAQAQTLADMNGSLALARDTANVATAAVRLSQVVGALEYQSESQRLQQNQQALQQSLSLLASAPLAARQPERIARIRARSLMLEQTINSLLLTGHQRHLQRNNMLSDLWQTQILLRHIDQLVQREQRTLPDAALREQTERLITIAIRTPSPIAVIEQLQQVMAQWRNVPLTGVTGENVQRLLVTQQRLLPLAEALEQSDLAIAYATYRIKALVAMLNEDISASVQQVALQSEARTLATHRELDSIIGFIALFALLALAITGYAGIYIYRNLGSSLTAIAGAMTRLAQGEQNVSVPGLQRRDELGELARAFNVFARNTASLAHTSRLLKEKSNQLESTFLAMRDGFALFDNNGQLVVWNAQYAELLGIAPHELHRGVPWQQLLAPLAVDLHDPGEPQEIRLDDGRTLELRFSPIPRRGMVNTVLDRTSRKTLEEALQHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLALTEGQLTSGPLASRIERARQAADRAAQLTQRLLAFSRKQALYPRAVSVVTLVDNLQGLLQHSLLPGQQLIIDAQRPGWPAWIDASQLENALMNLVVNARDAMHQQSGEIRLRIWNQRRLEGDEKRDRVTIEVIDHGCGMSAGVREQVFEPFFTTKATGSGSGSGLGLSMVYGFVRQSGGQIELETAPGQGTTVRLLLPRAPEAAAAVIAPPSPIEADISAEIEAASNRLVLVLDDEPAVRQTLCEHLHQLGYLTLECGDGEEALALLRQTPDIDLLISDLMLPGEINGAEVIRQAQQNWPQLATLLISGQDLRHQPVTLPLCERLAKPWQQAQLVQALQRAWQRSERLNRAQQAATTAPASH
>NZ_CP016889.1|WP_031591070.1|4149130_4150645_-|sugar-ABC-transporter-ATP-binding-protein
MTATPILEMRGITRRFGSFYALKGVDLTVYPGEVHALMGENGAGKSTLMKILAGAYTASSGEILIEGKPWALKGPKEALAAGITLIYQEINLAPNLTVAENIFLGSEIAPGGLVRRRQMAEEAQRVIDRLGAQFSAWDLVSRLSIAEQQQVEIARALQRNSRILVMDEPTAALSNRETEQLFALIKRLRSEGMAIIYISHRMAEVYELSDRVSVLRDGEYVGSLTRDQLNASELVRMMVGRPLSDLFNKDRAIPLGDIRLAVNHLTDGGKVHPSSLEVRAGEIVGLAGLVGAGRSELAQLIFGVHKPKEGEIWIDGEKVTIHSPRDAIARGIGFLTENRKEQGLFLEMAAQENIVMATLERDASYGMLNRRKGQTIASEAIASLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGPRILILDEPTRGVDVGAKSEIYRMMQEMARQGVAILMISSELPEVVGMSDRVYVMHEGTIVGELEGSHISQENIMTLATGAHSASAGEN
>NZ_CP016889.1|WP_010670880.1|4148139_4149120_-|ribose-ABC-transporter-permease
MTQLARTKAPTLKRALMGDLLQTVGILPILILIVAVFGFVTPNFFTEANLLNITRQASINIVLAAGMTFVILTGGIDLSVGSMLGTTAVVALVASLDPMLASMTIPMALGAGLVMGLFNGILVAWAGLPPFIVTLGTYTALRGAAYLLADGTTVINSDINFEWIGNGYLGPVPWLIVIAFAVIAICWFILRRTTLGVHIYAVGGNIQAARLTGIKVGMVLLFVYGMSGLLSGLGGLMSASRLYSANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLIGALIIATLNNGMTLMGVSYFWQLVIKGAVIIIAVLIDKYRTRHHVS
>NZ_CP016889.1|WP_010247755.1|4147110_4148049_-|ABC-transporter-substrate-binding-protein
MRFNPIVTGLLAATLFSTGLAQAKELKSIGVTVGDLANPFFVQITKGAEMKARQLAGDKVNVTLVSSGYDLGQQVGQIDNFIAAKVDMIILNAADSKGIAPAVKRARDAGIVVVAVDVAADGANATITSDNTEAGAMACKYIADRLKNKGNVVIINGPPVSAVQNRVEGCMTELKTHPDIKLLSYNQNAKGSREGGLEVMTGLLSANPKIDAVFAINDPTAIGADLAAKQAQRSEFFIVGVDGSPDGEEALKRKNSLFVATPAQDPQVMAAKAVEIGYDILQGKPAPDKPVLIPVKLIDRNNIGSYQGWTVK
>NZ_CP016889.1|WP_069026516.1|4146367_4147066_-|D-lyxose/D-mannose-family-sugar-isomerase
MQRSEVNYYLQHTREFFRQQDVHLPPWADFDVSQWRAQDRDVAQEILALRLGWDLTSFGAADFLQIGLTLFTLRNGSPGGQPWHKPYAEKIMHVREGQQTPMHYHPRKMEDIINRGGGNLIVELHNRDGDGLADSLVAVSLDGLRQTHAAGSLLRLSPGESVTLEAGIWHSFWGESGFGDVLVGEVSMTNDDENDNVFLTPLARFNPLEEDEAPRWLLCNDYAHWLSCARQA
>NZ_CP016889.1|WP_010247750.1|4145623_4146367_+|response-regulator-transcription-factor
MKPAILVVDDDPAVCDVLQDALSEHLLTVYRCHQGREALSMLSEHPEISLVMLDMMLPDTNGLLVLQQLQRQRPEVLVIMLTGMGSEAEMVVGLEMGADDYIAKPFNPRVVVARTRAALRRSGRIAQADPEQEGWRFGGWQLDDGRCQLFNPQRELVPLTQGEYSLLRALVRHARKVLTRDQLLELTHSESLDVFDRTIDVLIMRLRRKIETNPHQPDLIRTIRGLGYVFSADVVKPDSTTRASQIA
>NZ_CP016889.1|WP_010670886.1|4158440_4159577_-|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase
MIINNVRLVLENEVVTGSLEFRDERISSFSETTSQQPGALDGEGAWLMPGLVELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVSSGITTVLDAIGVGDVRDGGHRLDNLSKMIDAIRDSNRKGLNRAEHLLHLRCELPHPTTAPLFEALMGTPELALVSLMDHSPGQRQYASLTKYREYYQGKYQLNDAEMDQFEHDQLTLAAAWSQPNRQAIAGLCREHGIAIASHDDATAAHVEESHAAGSRIAEFPTTLEAARASRYRNMQVLMGAPNIVRGGSHSGNVAAWELASHGLLNILSSDYYPASLLDAAFRLADDERNSLGMAQAIALVTCNPARALGLEDRGVIAEGCRADLVLAHTAHGYPHVRHVWSKGRQVY
>NZ_CP016889.1|WP_022624938.1|4159573_4160287_-|phosphonate-C-P-lyase-system-protein-PhnL
MTTITPRLRVENLCKTFVLHNQNGAALPVLHNASLTAGEGECVVLHGHSGSGKSTLLRALYGNYQPDSGHIRVAHQGEWIDMAQASARQIIALRRDTLGWVSQFLRVIPRVPTLEIVMQPLLERGVERAFCEARAAELLTRLNVPQRLWSLAPSTFSGGEQQRVNIARGFIADYPVLLLDEPTASLDSVNSEAVVSLIEQARARGAAIVGIFHDRAVRERVADRLHLMHPIETGAQA
>NZ_CP016889.1|WP_069026519.1|4160287_4161049_-|phosphonate-C-P-lyase-system-protein-PhnK
MHSEQPLLAVNQLTHLYAPGKGFEQVSFDLWPGEVLGIVGESGSGKTTLLQSLSARLTPQHGSILYQNRDLYQMSESDRRRLLRTEWGVVHQHPMDGLRSQVSAGGNIGERLMATGQRHYGDIRAEASRWLQAVEIDAGRIDDLPTTFSGGMQQRLQIARNLVTQPQLMFMDEPTGGLDVSVQARLLDLLRTLVRELNLAVVIVTHDLGVARLLAHRLLVMKQGRVVESGLTDRVLDDPHHPYTQLLVSSVLN
>NZ_CP016889.1|WP_010247794.1|4161038_4161887_-|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ
MAELTGYNNGYLDEQTKRTIRRAILKAVAIPGYQVPFAGREMPMPYGWGTGGIQITASVIGDQDVLKVIDQGADDTTNAVSIRQFFKRVSNAATTERTADATLIQTRHRIPETPLEEDQILIFQVPIPEPLRFIEPRETETRTMHALEEYGIMQVKLYEDIARYGHIATTYAYPVRVNDRYVMDPSPIPKFDNPKMHMMPALQLFGAGREKRIYALPPYTRVESLDFDDHPFTVQQWDEPCALCGSRHSYLDEVVMDDQGTRMFVCSDTDFCHQQQEQQHAQ
>NZ_CP016889.1|WP_069026520.1|4161879_4162956_-|carbon-phosphorus-lyase-complex-subunit-PhnI
MYVAVKGGEKAIANAHQLQADLRRGDRAVAELGCDQVAQQLGLAVDRVMTEGGIYDPELAALAIKQASGDLVEAIFLLRAYRTTLPRLAESTPLATGAMRIERRISAVYKDLPGGQVLGPTYDYSHRLLDFTLLANGEIPAAPRDDRSVPDQCPHMFSMMSDEGLAAAEMDDGSEPVDITREPMSFPASRAARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAGEIRTGTLSVSICPEELGFELEIGELLLTECEMVNGVAHSDDTAPHFTRGYGLVFGRAERKAMAMALVDRALQCREQHERVTSPAQDEEFVLSHADNVEAAGFVSHLKLPHYVDFQAELELLKQLQHDYQERNHG
>NZ_CP016889.1|WP_010247799.1|4162955_4163531_-|phosphonate-C-P-lyase-system-protein-PhnH
MTLLASFNHPVADAQRAFRRILKAMSEPGVMVSLPLQQGWGALSPAATALLLTLVDQESPVWLDAEIDNEQLRNNLRFHTGAPITTQQDAPFALSHAAAQPDPTQFAAGDNMSPEKSTTLIIEVPSLNGGLTLRLSGPGLRETRAIAPQLPESVLEYLRTRPHPFPQGVDLIFTCGEAIMAVPRTTVVEVC
>NZ_CP016889.1|WP_010247802.1|4163530_4163977_-|phosphonate-C-P-lyase-system-protein-PhnG
MEQQTDRQRWLSVLAHSSAALLETHWQALNLQPAFTLIRPAEIGLTRLQARMGATGKRFVMGDATVTRAVVQLSDGTLGYSYLLGRDKAHAERCALLDALLQQPETRQLLEEKIITPLAAWRDEQRQLRAREIASSKVDFFTLVRGDN
>NZ_CP016889.1|WP_010247805.1|4163976_4164690_-|phosphonate-metabolism-transcriptional-regulator-PhnF
MELSRHPTTVYQAVAAQLEQALKERYRCGDYLPSEQQLADHYEVNRHTLRRAVDELVHKGLLQRRHGVGILVLMRPYDYPLHAQARFSQNLLEQGSHPTSERLLAVLRPASNDVANALGVKEGDNVIHLRTLRRANGVPLCLINHFLADLSWWPQLQQFNSGSLHDFLVEHTGKQLVRTQTRISTRRAQAKECRQLDIALHSPLLCVRTLNKTSDGAVAEYSVSLTRGDMIELTLEH
>NZ_CP016889.1|WP_069026614.1|4164921_4165551_+|Vat-family-streptogramin-A-O-acetyltransferase
MYGPDPANPHPMEGFPQVCFIKNTVKNPNIIIGDFTYYDDPEDSENFERNVLYHFPFIGDKLIIGKFCAIARGVQFIMNGANHNMAGFSTFPFYIFGNGWETGQPQASDLPYKGDTVIGNDVWMGYQALIMPGVKIGNGAIISSRSVVTSDVPAYSIVGGNPARVIRQRFTDETLSRLEKLAWWDWPVEKITRHLPAIIAADVGALPDE
>NZ_CP016889.1|WP_069026521.1|4165927_4166755_-|universal-stress-protein
MNNTVIACVDGSPSTRPVCEYAAWAAGKLDVPLALMHVLEKNDPPAVSDLTGAIGIDSREQLTEELVRVEGERSRLLMAQGKTVLADCAALLKQCGYPDAQMLQKHGALDEILAELGDIRLMVLGRRGSHNPVGSHLESVIRLQKRPVLVVPETFSPPTRVMFAYDGSEASRENLNRMTVSPLLSGLICHLVMVNGEAATLHDAQVILQKAGIVTESRLLKDHSVTGALCRYADENNIDLTVMGAYGHSRLRRFFIGSHTTEMLSESRQPLLMLR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	NZ_CP016889.1	1485795-1485827	0	1.0

1. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to position: 1485795-1485827, mismatch: 0, identity: 1.0

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
cctggcagcagcagccgatgctgctgaaactgc	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP032704	Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence	12545-12576	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP034472	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence	2716-2747	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP034472	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence	15717-15748	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP034472	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence	201840-201871	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP034473	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_4, complete sequence	31829-31860	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP034477	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence	165314-165345	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP034477	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence	178315-178346	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP034477	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence	182904-182935	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP034478	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_4, complete sequence	75429-75460	1	0.969
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP022518	Pantoea vagans strain FBS135 plasmid pPant2, complete sequence	176947-176978	1	0.969
NZ_CP016889_3	3.1\|1605664\|36\|NZ_CP016889\|CRISPRCasFinder	1605664-1605699	36	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	160196-160231	2	0.944
NZ_CP016889_3	3.1\|1605664\|36\|NZ_CP016889\|CRISPRCasFinder	1605664-1605699	36	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	267239-267274	2	0.944
NZ_CP016889_3	3.1\|1605664\|36\|NZ_CP016889\|CRISPRCasFinder	1605664-1605699	36	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	539503-539538	2	0.944
NZ_CP016889_3	3.1\|1605664\|36\|NZ_CP016889\|CRISPRCasFinder	1605664-1605699	36	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	116057-116092	2	0.944
NZ_CP016889_3	3.1\|1605664\|36\|NZ_CP016889\|CRISPRCasFinder	1605664-1605699	36	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	450661-450696	2	0.944
NZ_CP016889_3	3.1\|1605664\|36\|NZ_CP016889\|CRISPRCasFinder	1605664-1605699	36	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	15148-15183	3	0.917
NZ_CP016889_3	3.1\|1605664\|36\|NZ_CP016889\|CRISPRCasFinder	1605664-1605699	36	NZ_CP045721	Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence	290749-290784	4	0.889
NZ_CP016889_3	3.1\|1605664\|36\|NZ_CP016889\|CRISPRCasFinder	1605664-1605699	36	NZ_CP022517	Pantoea vagans strain FBS135 plasmid pPant1, complete sequence	116370-116405	4	0.889
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	CP049262	Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence	11860-11891	4	0.875
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	CP045780	Cronobacter sakazakii strain CFSAN068773 plasmid p2CFSAN068773, complete sequence	24255-24286	4	0.875
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NZ_CP031696	Erwinia billingiae strain TH88 plasmid unnamed1, complete sequence	68016-68047	4	0.875
NZ_CP016889_6	6.5\|2333268\|32\|NZ_CP016889\|CRISPRCasFinder,CRT	2333268-2333299	32	NC_014305	Erwinia billingiae Eb661 plasmid pEB170, complete sequence	126025-126056	4	0.875
NZ_CP016889_7	7.1\|2610063\|48\|NZ_CP016889\|CRISPRCasFinder	2610063-2610110	48	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	450693-450740	4	0.917
NZ_CP016889_7	7.1\|2610063\|48\|NZ_CP016889\|CRISPRCasFinder	2610063-2610110	48	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	116013-116060	4	0.917
NZ_CP016889_7	7.1\|2610063\|48\|NZ_CP016889\|CRISPRCasFinder	2610063-2610110	48	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	15104-15151	5	0.896
NZ_CP016889_7	7.1\|2610063\|48\|NZ_CP016889\|CRISPRCasFinder	2610063-2610110	48	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	267195-267242	5	0.896
NZ_CP016889_7	7.1\|2610063\|48\|NZ_CP016889\|CRISPRCasFinder	2610063-2610110	48	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	539535-539582	5	0.896
NZ_CP016889_6	6.8\|2333207\|29\|NZ_CP016889\|PILER-CR	2333207-2333235	29	NC_009829	Serratia proteamaculans 568 plasmid pSPRO01, complete sequence	3781-3809	7	0.759
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	MT799840	Salmonella phage JN03, complete genome	56932-56964	8	0.758
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	1137407-1137439	8	0.758
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	307111-307143	9	0.727
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	1157376-1157408	9	0.727
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	401702-401734	9	0.727
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	NZ_LR792629	Klebsiella pneumoniae isolate SB5881 plasmid SB5881_II	131262-131294	10	0.697
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	MN850624	Escherichia phage usur, complete genome	34067-34099	10	0.697
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	NZ_FO834904	Klebsiella pneumoniae strain Kp52.145 plasmid I, complete sequence	44276-44308	10	0.697
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	NZ_LR792630	Klebsiella pneumoniae isolate SB5881 plasmid SB5881_I	44276-44308	10	0.697
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	MK962629	Achromobacter phage vB_AxyP_19-32_Axy10, complete genome	19120-19152	11	0.667
NZ_CP016889_6	6.1\|2333023\|33\|NZ_CP016889\|CRISPRCasFinder,CRT	2333023-2333055	33	MK962639	Achromobacter phage vB_AxyP_19-32_Axy22, complete genome	16948-16980	11	0.667

1. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP032704 (Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

2. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP034472 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

3. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP034472 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

4. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP034472 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

5. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP034473 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_4, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

6. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP034477 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

7. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP034477 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

8. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP034477 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

9. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP034478 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_4, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

10. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP022518 (Pantoea vagans strain FBS135 plasmid pPant2, complete sequence) position: , mismatch: 1, identity: 0.969

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ccgtggtgttgacgttctgctgtgacatgttg	Protospacer
***********.********************

11. spacer 3.1|1605664|36|NZ_CP016889|CRISPRCasFinder matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.944

ctaaaaacgccgggagcgtttttgaacaacgcaacg	CRISPR spacer
acaaaaacgccgggagcgtttttgaacaacgcaacg	Protospacer
 .**********************************

12. spacer 3.1|1605664|36|NZ_CP016889|CRISPRCasFinder matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 2, identity: 0.944

ctaaaaacgccgggagcgtttttgaacaacgcaacg	CRISPR spacer
acaaaaacgccgggagcgtttttgaacaacgcaacg	Protospacer
 .**********************************

13. spacer 3.1|1605664|36|NZ_CP016889|CRISPRCasFinder matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 2, identity: 0.944

ctaaaaacgccgggagcgtttttgaacaacgcaacg	CRISPR spacer
acaaaaacgccgggagcgtttttgaacaacgcaacg	Protospacer
 .**********************************

14. spacer 3.1|1605664|36|NZ_CP016889|CRISPRCasFinder matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 2, identity: 0.944

ctaaaaacgccgggagcgtttttgaacaacgcaacg	CRISPR spacer
ataaaaacgccgggagcgtttttgaacaacgcaaag	Protospacer
 ********************************* *

15. spacer 3.1|1605664|36|NZ_CP016889|CRISPRCasFinder matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 2, identity: 0.944

ctaaaaacgccgggagcgtttttgaacaacgcaacg	CRISPR spacer
ataaaaacgccgggagcgtttttgaacaacgcaaag	Protospacer
 ********************************* *

16. spacer 3.1|1605664|36|NZ_CP016889|CRISPRCasFinder matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.917

ctaaaaacgccgggagcgtttttgaacaacgcaacg	CRISPR spacer
acaaaaacgccgggagcatttttgaacaacgcaacg	Protospacer
 .***************.******************

17. spacer 3.1|1605664|36|NZ_CP016889|CRISPRCasFinder matches to NZ_CP045721 (Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.889

ctaaaaacgccgggagcgtttttgaacaacgcaacg	CRISPR spacer
agaataacgccgggagcgtttctgaacaacgcaacg	Protospacer
  ** ****************.**************

18. spacer 3.1|1605664|36|NZ_CP016889|CRISPRCasFinder matches to NZ_CP022517 (Pantoea vagans strain FBS135 plasmid pPant1, complete sequence) position: , mismatch: 4, identity: 0.889

ctaaaaacgccgggagcgtttttgaacaacgcaacg	CRISPR spacer
agaataacgccgggagcgtttctgaacaacgcaacg	Protospacer
  ** ****************.**************

19. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to CP049262 (Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence) position: , mismatch: 4, identity: 0.875

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ctgcggtgttgacgttctgctgtgtcatgttg	Protospacer
*.*.*******.************ *******

20. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to CP045780 (Cronobacter sakazakii strain CFSAN068773 plasmid p2CFSAN068773, complete sequence) position: , mismatch: 4, identity: 0.875

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ctgcggtgttgacgttctgctgtgtcatgttg	Protospacer
*.*.*******.************ *******

21. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP031696 (Erwinia billingiae strain TH88 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ctgcggtgttgacgttctgctgtgccatgttg	Protospacer
*.*.*******.************ *******

22. spacer 6.5|2333268|32|NZ_CP016889|CRISPRCasFinder,CRT matches to NC_014305 (Erwinia billingiae Eb661 plasmid pEB170, complete sequence) position: , mismatch: 4, identity: 0.875

ccgtggtgttggcgttctgctgtgacatgttg	CRISPR spacer
ctgcggtgttgacgttctgctgtgccatgttg	Protospacer
*.*.*******.************ *******

23. spacer 7.1|2610063|48|NZ_CP016889|CRISPRCasFinder matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 4, identity: 0.917

agtacgcacctcatccctgaggtgcgcccgtagccgggccaacgcttc	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgcttt	Protospacer
* *****************************  **************.

24. spacer 7.1|2610063|48|NZ_CP016889|CRISPRCasFinder matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 4, identity: 0.917

agtacgcacctcatccctgaggtgcgcccgtagccgggccaacgcttc	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgcttt	Protospacer
* *****************************  **************.

25. spacer 7.1|2610063|48|NZ_CP016889|CRISPRCasFinder matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.896

agtacgcacctcatccctgaggtgcgcccgtagccgggccaacgcttc	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgcgtt	Protospacer
* *****************************  ************ *.

26. spacer 7.1|2610063|48|NZ_CP016889|CRISPRCasFinder matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 5, identity: 0.896

agtacgcacctcatccctgaggtgcgcccgtagccgggccaacgcttc	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgcgtt	Protospacer
* *****************************  ************ *.

27. spacer 7.1|2610063|48|NZ_CP016889|CRISPRCasFinder matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 5, identity: 0.896

agtacgcacctcatccctgaggtgcgcccgtagccgggccaacgcttc	CRISPR spacer
attacgcacctcatccctgaggtgcgcccgttcccgggccaacgcgtt	Protospacer
* *****************************  ************ *.

28. spacer 6.8|2333207|29|NZ_CP016889|PILER-CR matches to NC_009829 (Serratia proteamaculans 568 plasmid pSPRO01, complete sequence) position: , mismatch: 7, identity: 0.759

agtctcaattgttcggcagcgtcgtaatc	CRISPR spacer
gttctcaattgtttggcagcgtcaccatt	Protospacer
. ***********.*********.. **.

29. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to MT799840 (Salmonella phage JN03, complete genome) position: , mismatch: 8, identity: 0.758

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
gcagctggaagcagtcgatgctgctgaagctgc	Protospacer
 * * ..* *****.*************.****

30. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 8, identity: 0.758

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
cgctggacaagcagccgatgcagctgaaattgc	Protospacer
* . * *  ************ *******.***

31. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.727

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
caattcagcagcagccgatgctgccgaaaagcg	Protospacer
*    *******************.****

32. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.727

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
caattcagcagcagccgatgctgccgaaaagcg	Protospacer
*    *******************.****

33. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.727

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
caattcagcagcagccgatgctgccgaaaagcg	Protospacer
*    *******************.****

34. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_LR792629 (Klebsiella pneumoniae isolate SB5881 plasmid SB5881_II) position: , mismatch: 10, identity: 0.697

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
tgaggcagcagcggccgatgcggctgattttcg	Protospacer
.  *********.******** *****  .*

35. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to MN850624 (Escherichia phage usur, complete genome) position: , mismatch: 10, identity: 0.697

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
actggcagcagcagccgtggctgcttggcaatc	Protospacer
 ****************  ****** ..    *

36. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_FO834904 (Klebsiella pneumoniae strain Kp52.145 plasmid I, complete sequence) position: , mismatch: 10, identity: 0.697

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
tgaggcagcagcggccgatgcggctgattttcg	Protospacer
.  *********.******** *****  .*

37. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to NZ_LR792630 (Klebsiella pneumoniae isolate SB5881 plasmid SB5881_I) position: , mismatch: 10, identity: 0.697

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
tgaggcagcagcggccgatgcggctgattttcg	Protospacer
.  *********.******** *****  .*

38. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to MK962629 (Achromobacter phage vB_AxyP_19-32_Axy10, complete genome) position: , mismatch: 11, identity: 0.667

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
agcagcacaagcagccgatgctgctgaaggaat	Protospacer
  ..***  *******************.  ..

39. spacer 6.1|2333023|33|NZ_CP016889|CRISPRCasFinder,CRT matches to MK962639 (Achromobacter phage vB_AxyP_19-32_Axy22, complete genome) position: , mismatch: 11, identity: 0.667

cctggcagcagcagccgatgctgctgaaactgc	CRISPR spacer
agcagcacaagcagccgatgctgctgaagggat	Protospacer
  ..***  *******************.  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2464478 : 2471006

Streptococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010255197.1\|2464478_2465591_-	porin OmpC	Q1MVN1	Enterobacteria_phage	3.3e-111	56.2
WP_069025862.1\|2465829_2466933_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.0e-60	42.7
WP_069025863.1\|2466943_2468197_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.1e-91	44.3
WP_069025864.1\|2468557_2469289_+	chromophore lyase	A0A2I6PIE7	Escherichia_phage	2.4e-46	37.1
WP_071941072.1\|2469711_2469990_+	hypothetical protein	NA	NA	NA	NA
WP_031590368.1\|2470194_2470662_+	glycoside hydrolase family protein	H9C148	Vibrio_phage	1.0e-26	45.3
WP_031590367.1\|2470658_2471006_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.9e-21	46.5

DBSCAN-SWA_2

3358926 : 3369150

Tupanvirus(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010245687.1\|3358926_3360855_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.7e-126	36.9
WP_029519030.1\|3360858_3361410_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.4e-15	32.4
WP_010245683.1\|3361509_3361707_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_003853267.1\|3361751_3362108_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_106120997.1\|3362230_3362275_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_010245680.1\|3362422_3363406_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	2.2e-34	37.6
WP_069026156.1\|3363420_3365808_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	4.1e-10	32.0
WP_003853259.1\|3365812_3366115_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.3e-13	40.0
WP_069026157.1\|3366294_3367278_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_031590481.1\|3367328_3367874_+	glutathione peroxidase	A0A1S7DM81	Molluscum_contagiosum_virus	7.7e-13	36.6
WP_069026158.1\|3368691_3369150_+	C40 family peptidase	A0A217EQL1	Bacillus_phage	9.4e-12	38.4

DBSCAN-SWA_3

3503924 : 3510911

uncultured_Caudovirales_phage(50.0%)

head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069026206.1\|3503924_3505538_+\|head,tail	head-tail connector protein	A0A2H4J3N6	uncultured_Caudovirales_phage	8.4e-124	46.3
WP_069026207.1\|3505534_3505747_+	hypothetical protein	A0A2I6PFS5	Proteus_phage	5.4e-07	50.0
WP_069026208.1\|3505743_3505980_+	hypothetical protein	A0A291LBC4	Klebsiella_phage	5.0e-17	54.5
WP_069026593.1\|3505979_3506204_+	hypothetical protein	NA	NA	NA	NA
WP_155763546.1\|3506200_3507058_+	hypothetical protein	NA	NA	NA	NA
WP_069026594.1\|3507337_3508249_+	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	8.9e-38	36.4
WP_069026210.1\|3508303_3508900_+	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	7.6e-38	42.3
WP_069026211.1\|3508886_3510911_+	hypothetical protein	A0A1B1IW99	uncultured_Mediterranean_phage	1.9e-72	26.6

DBSCAN-SWA_4

3902002 : 3996082

102

Erwinia_phage(55.1%)

protease,tail,terminase,integrase,tRNA,plate,portal,holin,capsid,head

attL 3934617:3934634|attR 3968511:3968528

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003852678.1\|3902002_3902884_-\|protease	protease HtpX	NA	NA	NA	NA
WP_031591391.1\|3903128_3905168_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.6e-87	34.5
WP_010258776.1\|3905187_3905889_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_010258773.1\|3905985_3906486_-	GAF domain-containing protein	NA	NA	NA	NA
WP_031591392.1\|3906699_3907944_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_064704230.1\|3907912_3910546_+	PqiB family protein	NA	NA	NA	NA
WP_069026368.1\|3910623_3912057_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_069026369.1\|3912058_3912706_-	metallophosphoesterase	K7P6H8	Enterobacteria_phage	5.5e-58	50.0
WP_010258758.1\|3913035_3913248_-	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_060680369.1\|3913394_3914744_-	MFS transporter	NA	NA	NA	NA
WP_031591398.1\|3914885_3916916_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	2.2e-20	26.0
WP_010258750.1\|3917171_3917765_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_069026370.1\|3917779_3919252_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_033779020.1\|3919275_3920958_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.2e-56	30.7
WP_010258741.1\|3921386_3921737_+	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_010258739.1\|3921723_3922053_+	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_069026371.1\|3922253_3923396_+	acyltransferase	Q6QI96	Burkholderia_phage	2.9e-38	33.0
WP_031591403.1\|3923545_3923806_+	hypothetical protein	NA	NA	NA	NA
WP_031591405.1\|3923907_3924093_+	hypothetical protein	NA	NA	NA	NA
WP_153070575.1\|3924392_3924713_-	hypothetical protein	NA	NA	NA	NA
WP_071941105.1\|3924779_3924968_-	general stress protein	NA	NA	NA	NA
WP_069026373.1\|3926114_3927137_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	3.3e-25	26.3
WP_031591408.1\|3928101_3928560_+	hypothetical protein	A0A218M4J4	Erwinia_phage	3.0e-18	37.7
WP_031591410.1\|3928553_3928853_+	DUF1493 family protein	NA	NA	NA	NA
WP_069026374.1\|3929241_3929673_-	hypothetical protein	S4TUD6	Salmonella_phage	1.7e-55	75.7
WP_039391027.1\|3930274_3931549_+	AAA family ATPase	NA	NA	NA	NA
WP_069026375.1\|3931538_3932168_+	hypothetical protein	NA	NA	NA	NA
WP_031377482.1\|3933149_3933599_-	hypothetical protein	NA	NA	NA	NA
3934617:3934634	attL	NA	NA	NA	NA
WP_069026377.1\|3934710_3935043_-	hypothetical protein	NA	NA	NA	NA
WP_069026378.1\|3935029_3935269_+	hypothetical protein	NA	NA	NA	NA
WP_069026379.1\|3935388_3936144_-	hypothetical protein	NA	NA	NA	NA
WP_069026380.1\|3936173_3936407_-	hypothetical protein	NA	NA	NA	NA
WP_155763568.1\|3936578_3937136_-	hypothetical protein	NA	NA	NA	NA
WP_069026382.1\|3937205_3938054_-	phage repressor protein CI	Q6K1G0	Salmonella_virus	1.2e-76	50.7
WP_069026383.1\|3938168_3938570_+	hypothetical protein	NA	NA	NA	NA
WP_069026384.1\|3938601_3939111_+	phage regulatory CII family protein	F1BUS6	Erwinia_phage	5.3e-64	72.2
WP_071941108.1\|3939120_3939309_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	8.8e-09	49.1
WP_069026385.1\|3939272_3939614_+	DUF5347 domain-containing protein	A0A1S6L019	Salmonella_phage	1.4e-25	52.3
WP_069026386.1\|3939681_3939912_+	DUF2732 family protein	E5G6L6	Salmonella_phage	9.4e-05	50.0
WP_069026387.1\|3939911_3940136_+	TraR/DksA family transcriptional regulator	F1BUS2	Erwinia_phage	1.5e-15	56.9
WP_069026388.1\|3940135_3942364_+	replication endonuclease	F1BUS0	Erwinia_phage	9.3e-307	71.9
WP_052270553.1\|3942473_3942650_+	hypothetical protein	NA	NA	NA	NA
WP_069026389.1\|3943026_3944184_+	hypothetical protein	NA	NA	NA	NA
WP_069026390.1\|3944185_3944722_+	hypothetical protein	NA	NA	NA	NA
WP_069026391.1\|3944756_3945785_-\|portal	phage portal protein	F1BUR7	Erwinia_phage	5.4e-185	90.4
WP_069026392.1\|3945784_3947548_-\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	0.0e+00	94.7
WP_069026393.1\|3947692_3948541_+\|capsid	GPO family capsid scaffolding protein	F1BUR1	Erwinia_phage	4.2e-106	73.0
WP_069026394.1\|3948593_3949673_+\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	6.6e-173	86.1
WP_069026395.1\|3949676_3950345_+\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	9.5e-98	81.1
WP_069026396.1\|3950437_3950908_+\|head	head completion/stabilization protein	F1BUQ6	Erwinia_phage	3.3e-60	77.8
WP_064704198.1\|3950907_3951111_+\|tail	tail protein X	F1BUQ5	Erwinia_phage	4.1e-28	86.6
WP_069026397.1\|3951113_3951311_+	hypothetical protein	F1BUQ4	Erwinia_phage	7.5e-27	91.9
WP_069026398.1\|3951314_3951824_+	lysozyme	A0A218M4K3	Erwinia_phage	8.4e-54	60.7
WP_069026399.1\|3951820_3952243_+	LysB family transcriptional regulator	F1BUQ1	Erwinia_phage	5.0e-44	68.8
WP_069026400.1\|3952344_3952812_+\|tail	phage tail protein	F1BUP9	Erwinia_phage	3.2e-60	76.5
WP_069026401.1\|3952808_3953261_+	phage virion morphogenesis protein	F1BUP7	Erwinia_phage	1.7e-45	65.5
WP_069026402.1\|3953263_3954556_+	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_069026403.1\|3954687_3955272_+\|plate	phage baseplate assembly protein V	F1BUP5	Erwinia_phage	4.7e-85	79.4
WP_010256716.1\|3955268_3955619_+	GPW/gp25 family protein	F1BUP4	Erwinia_phage	2.4e-44	75.9
WP_069026404.1\|3955623_3956532_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	8.3e-137	85.4
WP_069026405.1\|3956524_3957133_+\|tail	phage tail protein I	F1BUP2	Erwinia_phage	5.8e-94	80.7
WP_069026406.1\|3957129_3958269_+\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	8.6e-99	55.0
WP_069026407.1\|3958268_3958856_+\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	7.4e-46	48.5
WP_069026408.1\|3958883_3959495_-	hypothetical protein	NA	NA	NA	NA
WP_069026409.1\|3959662_3960832_+\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	1.4e-197	88.7
WP_010246672.1\|3960844_3961354_+\|tail	phage major tail tube protein	F1BUU2	Erwinia_phage	5.4e-77	81.2
WP_069026410.1\|3961412_3961691_+\|tail	phage tail assembly protein	F1BUU0	Erwinia_phage	1.4e-31	78.9
WP_071778604.1\|3961723_3961849_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_069026411.1\|3961838_3964301_+\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	9.0e-210	55.5
WP_069026412.1\|3964304_3964832_+\|tail	phage tail protein	F1BUT6	Erwinia_phage	1.9e-64	77.9
WP_069026603.1\|3964885_3966004_+	phage late control D family protein	Q6K1G4	Salmonella_virus	2.4e-138	67.7
WP_069026604.1\|3966082_3966298_+	ogr/Delta-like zinc finger family protein	F1BUT0	Erwinia_phage	7.4e-28	77.8
WP_155763570.1\|3966354_3967200_-	hypothetical protein	NA	NA	NA	NA
WP_069026414.1\|3967377_3968442_+\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	1.1e-116	56.9
WP_010670792.1\|3968741_3969089_-	YebY family protein	NA	NA	NA	NA
3968511:3968528	attR	NA	NA	NA	NA
WP_081325942.1\|3969117_3969993_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_039391031.1\|3969998_3970376_-	copper homeostasis periplasmic binding protein CopC	NA	NA	NA	NA
WP_010258692.1\|3970527_3970761_+	DNA polymerase III subunit theta	Q71T70	Escherichia_phage	1.9e-16	64.6
WP_069026606.1\|3970760_3971429_+	exodeoxyribonuclease X	NA	NA	NA	NA
WP_069026415.1\|3971422_3973486_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_010258682.1\|3973612_3974269_-	DUF533 domain-containing protein	NA	NA	NA	NA
WP_069026607.1\|3974435_3975614_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_069026416.1\|3975648_3976287_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_010258671.1\|3976501_3977977_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	1.6e-76	35.8
WP_031591425.1\|3978341_3979211_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_031591426.1\|3979326_3980769_+	pyruvate kinase	NA	NA	NA	NA
WP_069026417.1\|3980853_3982086_+	MFS transporter	NA	NA	NA	NA
WP_033771998.1\|3982273_3983248_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_069026418.1\|3983373_3984705_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	6.3e-16	40.0
WP_010670802.1\|3984718_3985666_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_069026419.1\|3985743_3986499_+	zinc ABC transporter ATP-binding protein ZnuC	W6JKT0	Anomala_cuprea_entomopoxvirus	8.2e-13	29.0
WP_069026420.1\|3986495_3987281_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_010258640.1\|3987281_3988286_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.8e-07	25.9
WP_010670803.1\|3988294_3988909_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_003849205.1\|3989005_3989533_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	3.8e-09	32.4
WP_069026421.1\|3989570_3990314_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_031591430.1\|3990598_3991030_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_010258624.1\|3991029_3992808_-\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	2.8e-11	26.4
WP_069026422.1\|3993020_3993842_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	2.4e-50	72.4
WP_010258617.1\|3993911_3994307_+	MAPEG family protein	NA	NA	NA	NA
WP_010258614.1\|3994388_3995117_+	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	NA	NA	NA
WP_069026423.1\|3995113_3996082_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP016891

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

13110 : 69772

Morganella_phage(23.53%)

coat,transposase,integrase

attL 42816:42835|attR 78240:78259

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155763629.1\|13110_13632_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_069026963.1\|13640_14174_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_155763631.1\|15077_15272_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_069027104.1\|18243_18663_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.0e-25	50.4
WP_069026965.1\|20359_20602_-	hypothetical protein	NA	NA	NA	NA
WP_069026966.1\|20721_21042_-	stability/partitioning determinant	NA	NA	NA	NA
WP_010260387.1\|21215_21860_-	ParA family protein	E5FFJ3	Burkholderia_phage	2.5e-10	26.6
WP_069026967.1\|22156_22948_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	3.2e-15	45.6
WP_050680631.1\|23509_24391_+	hypothetical protein	NA	NA	NA	NA
WP_050680630.1\|24518_24977_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_050680629.1\|25121_27104_+	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_069026968.1\|27100_27739_+	hypothetical protein	NA	NA	NA	NA
WP_069026969.1\|27781_29044_-	translesion error-prone DNA polymerase V subunit UmuC	A0A1W6JNT0	Morganella_phage	1.5e-136	59.0
WP_069026970.1\|29046_29424_-	phage repressor protein	A0A1W6JNS2	Morganella_phage	2.6e-12	36.4
WP_069026971.1\|33613_34261_+	recombinase family protein	NA	NA	NA	NA
WP_155763633.1\|36282_36648_-	hypothetical protein	NA	NA	NA	NA
WP_039392538.1\|36755_37262_-	DNA repair protein RadC	NA	NA	NA	NA
WP_071941171.1\|37314_37947_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	2.4e-18	40.9
WP_069026973.1\|37943_38291_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.5e-41	70.4
WP_069026974.1\|38310_39894_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	7.1e-168	59.2
WP_069026975.1\|40956_41373_+	hypothetical protein	NA	NA	NA	NA
WP_069026976.1\|41555_42332_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	5.6e-09	30.9
42816:42835	attL	NA	NA	NA	NA
WP_081325982.1\|43786_44083_-	hypothetical protein	NA	NA	NA	NA
WP_069026978.1\|44644_45715_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	2.6e-20	29.3
WP_069026979.1\|46284_47367_+	LD-carboxypeptidase	NA	NA	NA	NA
WP_071941175.1\|48582_48822_-	hypothetical protein	NA	NA	NA	NA
WP_069026981.1\|50018_50243_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_155763635.1\|50583_50892_-	hypothetical protein	NA	NA	NA	NA
WP_069026984.1\|51495_52536_-	CAP-Gly protein	NA	NA	NA	NA
WP_069026985.1\|53324_53531_+	hypothetical protein	NA	NA	NA	NA
WP_069026987.1\|54011_54389_-	phage repressor protein	A0A1W6JNS2	Morganella_phage	5.3e-13	36.9
WP_069027106.1\|54545_56225_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	M4T586	Rhodobacter_phage	6.7e-07	24.2
WP_069026988.1\|56227_57136_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_069026989.1\|57132_58344_+	TniQ family protein	NA	NA	NA	NA
WP_069026990.1\|58410_59025_+	recombinase family protein	E5FFF9	Burkholderia_phage	3.5e-38	45.3
WP_081325995.1\|60299_61181_+	hypothetical protein	NA	NA	NA	NA
WP_069026993.1\|61372_62677_-	DUF1173 family protein	NA	NA	NA	NA
WP_069026995.1\|63186_63390_+	hypothetical protein	NA	NA	NA	NA
WP_069026997.1\|63776_64643_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	3.3e-119	73.4
WP_069026998.1\|65769_66978_+	AAA family ATPase	Q1MVJ3	Enterobacteria_phage	5.1e-174	75.2
WP_069026999.1\|66974_67961_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	4.9e-90	57.2
WP_155763637.1\|68491_68821_+	hypothetical protein	NA	NA	NA	NA
WP_069027001.1\|68947_69772_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	6.2e-22	54.0
78240:78259	attR	NA	NA	NA	NA

DBSCAN-SWA_2

83584 : 157453

Enterobacteria_phage(17.65%)

transposase,integrase

attL 83567:83626|attR 125690:126918

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
83567:83626	attL	NA	NA	NA	NA
WP_088234235.1\|83584_84732_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.2e-149	93.7
WP_081325983.1\|84758_85580_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	5.2e-21	40.7
WP_069027107.1\|86100_86979_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069027014.1\|87412_87964_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_069027015.1\|88003_88672_+	molecular chaperone	NA	NA	NA	NA
WP_069027016.1\|88690_91174_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_069027017.1\|91184_92489_+	fimbrial protein	NA	NA	NA	NA
WP_069027018.1\|92488_93226_+	molecular chaperone	NA	NA	NA	NA
WP_069027019.1\|93315_93600_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_069027020.1\|93700_93904_+	hypothetical protein	NA	NA	NA	NA
WP_081325984.1\|96239_96437_-\|transposase	transposase	NA	NA	NA	NA
WP_069027021.1\|96984_97926_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.8e-71	56.4
WP_069027022.1\|101451_102723_+	oligosaccharide MFS transporter	NA	NA	NA	NA
WP_069027023.1\|102774_103965_+	glycoside hydrolase family 88 protein	NA	NA	NA	NA
WP_069027024.1\|104263_104959_+	porin OmpL	NA	NA	NA	NA
WP_167620276.1\|105070_105247_+	hypothetical protein	NA	NA	NA	NA
WP_081325986.1\|105262_105655_+	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_071941179.1\|105717_106017_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_069027025.1\|106333_107188_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.9e-21	54.0
WP_069027109.1\|108946_109165_-	hypothetical protein	NA	NA	NA	NA
WP_069027026.1\|109881_110067_-	hypothetical protein	NA	NA	NA	NA
WP_069027027.1\|110967_112317_+	hypothetical protein	NA	NA	NA	NA
WP_069027028.1\|112309_112987_+	lasso peptide biosynthesis B2 protein	NA	NA	NA	NA
WP_155763639.1\|112991_113321_+	hypothetical protein	NA	NA	NA	NA
WP_069027029.1\|113608_114721_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	8.1e-17	27.4
WP_069027030.1\|114807_115992_+	efflux RND transporter periplasmic adaptor subunit	A0A140XAI1	Dickeya_phage	1.9e-11	36.3
WP_069027031.1\|115988_117926_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.9e-37	42.0
WP_155763641.1\|118072_118228_-	hypothetical protein	NA	NA	NA	NA
WP_155763643.1\|118659_119004_-	hypothetical protein	NA	NA	NA	NA
WP_069027033.1\|119690_120038_+	hypothetical protein	NA	NA	NA	NA
WP_071941181.1\|120807_121518_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.8e-49	86.0
WP_069027035.1\|123047_123842_+	ParA family protein	F0PIG8	Enterococcus_phage	9.5e-12	32.2
WP_155763645.1\|123828_124080_+	hypothetical protein	NA	NA	NA	NA
WP_081325989.1\|124370_124517_-	DUF4113 domain-containing protein	A0A1W6JNT0	Morganella_phage	9.5e-11	60.4
WP_088234235.1\|124583_125730_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.2e-149	93.7
WP_167620281.1\|125732_126542_-	hypothetical protein	NA	NA	NA	NA
WP_069027036.1\|128180_129404_+	cupin domain-containing protein	NA	NA	NA	NA
125690:126918	attR	NA	NA	NA	NA
WP_081325990.1\|131648_131858_-	hypothetical protein	NA	NA	NA	NA
WP_069027039.1\|131906_132353_-	hypothetical protein	NA	NA	NA	NA
WP_081325991.1\|136030_137026_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_069027041.1\|137162_137357_+	hypothetical protein	NA	NA	NA	NA
WP_155763654.1\|138173_140789_+	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	1.5e-74	32.3
WP_109654037.1\|140861_140999_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	5.1e-06	65.6
WP_069027043.1\|142145_142559_-	hypothetical protein	NA	NA	NA	NA
WP_069026984.1\|143782_144823_+	CAP-Gly protein	NA	NA	NA	NA
WP_069027044.1\|146986_147334_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.3e-41	71.0
WP_069027045.1\|147330_147807_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.1e-18	40.9
WP_155763647.1\|148609_149311_-	hypothetical protein	NA	NA	NA	NA
WP_071941187.1\|150302_150653_-	hypothetical protein	NA	NA	NA	NA
WP_069027050.1\|151282_152650_-	indole acetimide hydrolase	NA	NA	NA	NA
WP_167620277.1\|155480_156935_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	5.6e-143	57.5
WP_167620278.1\|156931_157453_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	1.2e-68	77.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP016890

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016890_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016890_1

476113-476188

Orphan

Consensus_repeat	Method
AACGTTCACTGTAATCAGTAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016890_1

>merge|NZ_CP016890|1|476113-476188|CRISPRCasFinder
AACGTTCACTGTAATCAGTAGAATGCACGATGCCTTCAGGTACACCGCAGCAAACATTCACTGTAATCAGCAGAAC

>NZ_CP016890|1|1|476113-476188|CRISPRCasFinder
AACGTTCACTGTAATCAGTAGAA	TGCACGATGCCTTCAGGTACACCGCAGCA
AACATTCACTGTAATCAGCAGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016890.1\|WP_069026885.1\|484348_485251_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NZ_CP016890.1\|WP_069026877.1\|468582_469881_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP016890.1\|WP_031591167.1\|473856_475056_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|376033
NZ_CP016890.1\|WP_010246810.1\|482592_483141_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP016890.1\|WP_069026883.1\|480903_482133_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP016890.1\|WP_033743923.1\|483267_483921_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP016890.1\|WP_069026884.1\|482253_482592_+\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|119344
NZ_CP016890.1\|WP_069026880.1\|472877_473849_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|370113
NZ_CP016890.1\|WP_069026876.1\|466678_467581_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP016890.1\|WP_010246820.1\|476869_477799_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	unknown
NZ_CP016890.1\|WP_069026878.1\|469893_470736_+\|transketolase	unknown	unknown	gnl\|CDD\|238970
NZ_CP016890.1\|WP_031591161.1\|467778_468528_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP016890.1\|WP_069026886.1\|485307_486000_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153233
NZ_CP016890.1\|WP_069026882.1\|479632_480811_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP016890.1\|WP_069026875.1\|462603_464103_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP016890.1\|WP_069026881.1\|478258_479629_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|184426
NZ_CP016890.1\|WP_031591176.1\|483917_484241_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377512
NZ_CP016890.1\|WP_069026879.1\|470737_471748_+\|transketolase-family-protein	unknown	unknown	gnl\|CDD\|226467
NZ_CP016890.1\|WP_031591155.1\|464121_464682_-\|lipid-IV(A)-palmitoyltransferase-PagP	unknown	unknown	gnl\|CDD\|236829
NZ_CP016890.1\|WP_031591158.1\|465027_466479_-\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917

Protein	Function_ID	Function_description	E-value
NZ_CP016890.1\|WP_069026885.1\|484348_485251_+\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	1.00087e-62
NZ_CP016890.1\|WP_069026877.1\|468582_469881_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.86466e-101
NZ_CP016890.1\|WP_031591167.1\|473856_475056_-\|AAA-family-ATPase	gnl\|CDD\|376033	pfam18607, HTH_54, ParA helix turn helix domain. The accurate segregation of DNA is essential for the faithful inheritance of genetic information. Segregation of the prototypical P1 plasmid par system requires two proteins, ParA and ParB, and a centromere. When bound to ATP, ParA mediates segregation by interacting with centromere-bound ParB, but when bound to ADP, ParA fulfills a different function: DNA-binding transcription autoregulation. ParA consists of an elongated N-terminal alpha-helix which mediates dimerization, a winged-HTH and a Walker-box containing C-domain. This entry describes the N-terminal alpha helix domain combined with the winged HTH region.	8.39702e-55
NZ_CP016890.1\|WP_010246810.1\|482592_483141_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.40304e-12
NZ_CP016890.1\|WP_069026883.1\|480903_482133_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	7.71089e-116
NZ_CP016890.1\|WP_033743923.1\|483267_483921_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	4.7943e-38
NZ_CP016890.1\|WP_069026884.1\|482253_482592_+\|ASCH-domain-containing-protein	gnl\|CDD\|119344	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation.	1.08436e-10
NZ_CP016890.1\|WP_069026880.1\|472877_473849_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|370113	pfam08775, ParB, ParB family. ParB is a component of the par system which mediates accurate DNA partition during cell division. It recognizes A-box and B-box DNA motifs. ParB forms an asymmetric dimer with 2 extended helix-turn-helix (HTH) motifs that bind to A-boxes. The HTH motifs emanate from a beta sheet coiled coil DNA binding module. Both DNA binding elements are free to rotate around a flexible linker, this enables them to bind to complex arrays of A- and B-box elements on adjacent DNA arms of the looped partition site.	9.30804e-50
NZ_CP016890.1\|WP_069026876.1\|466678_467581_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	5.1026e-63
NZ_CP016890.1\|WP_069026878.1\|469893_470736_+\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	2.18909e-124
NZ_CP016890.1\|WP_031591161.1\|467778_468528_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	1.28205e-88
NZ_CP016890.1\|WP_069026886.1\|485307_486000_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153233	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	4.20488e-89
NZ_CP016890.1\|WP_069026882.1\|479632_480811_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.01734e-38
NZ_CP016890.1\|WP_069026875.1\|462603_464103_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	3.9787e-22
NZ_CP016890.1\|WP_069026881.1\|478258_479629_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|184426	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional.	0
NZ_CP016890.1\|WP_031591176.1\|483917_484241_+\|AzlD-domain-containing-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	4.24654e-07
NZ_CP016890.1\|WP_069026879.1\|470737_471748_+\|transketolase-family-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	9.44893e-138
NZ_CP016890.1\|WP_031591155.1\|464121_464682_-\|lipid-IV(A)-palmitoyltransferase-PagP	gnl\|CDD\|236829	PRK11045, pagP, lipid IV(A) palmitoyltransferase PagP.	1.00204e-96
NZ_CP016890.1\|WP_031591158.1\|465027_466479_-\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.215e-123

>NZ_CP016890.1|WP_031591167.1|473856_475056_-|AAA-family-ATPase
MANDDKQVMKVAQRSERMLLSLTEQIQAQKQELHENTYYQVYAKAALAKLPKLTRASVDYAVNEMEESGYQFDKRAAGSSVKYAMSIQNIIDIYHHRGVPKYRDRHTDAYTLFVGNLKGGVSKTVSTVSLAHALRAHPHLLFEDLRILVIDLDPQSSATMFLNHERSVGLVEATAAQAMLQNVSRDELVNEFIVPSIIPGVDVLPASIDDAFIASSWDQLCAEHLPQQNVHAVLYDNVIAKLKKDYDFIFIDSGPHLDAFLKNAIAASDLLMTPVPPAQVDFHSTLKYLTRLPELIAIIEDSGATCRLQGNIGFMSKLSNKADHKLCHSLAKEIFGGDMLDAALPRLDGFERCGESFDTVISANPSTYVGSSEALKNARSAAEDFAKAVFDRIEFIRLN
>NZ_CP016890.1|WP_069026880.1|472877_473849_-|ParB/RepB/Spo0J-family-partition-protein
MSAKRITIGRTFSQTPLENDTPDSQHNQTFVLATGKRALFRFERIAASDVESKTFVTMETNGRDQAGLTPDSLRDIIRTIKLQQFFPAIGVMRNDRIEILDGSRRRAAALYCKTGLDVLITDAAITADEARRLAQDIQTAREHNLREVGMRLLTLKDGGLSQKEIAENQGLSQAKVTRALQAASVPSDLISLFPNHAELTYPDYKALLQAADKLSESGQSVEALIKSISREIDVVCAREGLAEDELKNHILRLIRQGSQTLIKEPEKDKTQATALWSFADKDRFARKKVRGRMFSYEFNRQSKELQEELDKVIAETLKKYLNR
>NZ_CP016890.1|WP_069026879.1|470737_471748_+|transketolase-family-protein
MSSQPQKKRLTTSAMIASIAAEGQPTVSAPFGHALVSLAEQRSDVVGMTADLSKYTDLHLFAEAFPKRFYQMGMAEQLLMSAAAGMAREGFMPFVTTYAVFASRRAYDFICMAIAEENLNVKIACALPGLTTGYGPSHQATDDLAIFRGMPNLTIIDPCDALEISQVIPAIAEHQGPVYLRLLRGKVPLVLDKYDYRYQHGKAQRLRGGKHAVIISSGLMTMRALEAAETLEKQGIEVGVVHSPMIKPLDEETILREAGEAVHHHQLVITAENHSITGGLGEAIAGLLMRNHVTPRFKQIALPDAFLAAGALPTLHDRYGISTDAMVKQITAWLEA
>NZ_CP016890.1|WP_069026878.1|469893_470736_+|transketolase
MTDSRHDSHMISLQQRATNIRRHALLMGQIQGQGYIGQALGAADLLAVSYFHAMNYRPDQPEWEERDRFYLSIGHYAIALYAALLEAGVIPEEERETYGTDESRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGLKQKGSQARVYNLLSDGELNEGSTWEAAMSASHWQLDNLIALIDVNNQQADGHSSEILAFEPIVDRWQAFGWYTQRVDGNDISALQAAFDAARSWPEPQPRVIICDTRMGKGVPFLESREKTHFIRVDADEWDKALTALEQGV
>NZ_CP016890.1|WP_069026877.1|468582_469881_+|MFS-transporter
MTTLNLSAASAARDITYRKIAWRLMPWLMLCYLCAYLDRVNVGFAKLQMMDDLSLSETVYGLGAGIFFIGYFFFEVPSNLILHRVGARRWIARIMITWGIISALFAFVETAWQFYLLRFLLGVAEAGLAPGLLLYLTYWFPSHRRARMTVLWFVAIPLSGMIGGPLSGWIMATFAGFHGWAGWQWMFMLEAIPTLVMGLVVLLVLKDRVEQAEWLDEDEKRRVRADLDEDNQQKACHGTVKAFVADRRLWLLTLIYFCVVMGQYALTFWLPTLVRNSGVSEPLHIGLLTSLPYLCAIIFMLLAGRSGDRYRERRWHLIVPMLIGLSGLTLATLLSHSVSLSLLSLCIAAAGILSASSLFWMLPTNLLGGVSAAAGIAAVNCIANLAGFFSPWLIGTITTATGTPASGMYFIAAVLLGGALCVLRIRAADVNR
>NZ_CP016890.1|WP_031591161.1|467778_468528_+|SDR-family-oxidoreductase
MLLENKVAIITGAASQRGIGRATAACFAQHGARVVVLDLDLQAAQASALSCGEGHLGLAADVTDPLSVRRAIDQILEHFGRIDVLVNNAGITQPVKTLEIGIEDYNRILDVNLRGTLLMSQAVIPTMQQQKGGSIVCLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMAREFGPDQIRINALTPGLIQTDITGGLLQDERRHAILDGIPLGRLGSASDVANAALFLASDLSGYLTGITLDVNGGMLIH
>NZ_CP016890.1|WP_069026876.1|466678_467581_-|LysR-family-transcriptional-regulator
MEKQSDHLPSIKSLRVFEQVAHFGNVARAAEELSIKPSAASHQLAKLERELGCILFNRSAKGVVLTLSGEHYLREIGPILLSLTQATARISNEKARSNLRIHCAPSFGLLWLLPRIHKFRDSYPEFQLTLSCSYENLSFSRDNIDIAIRHGFPDWNSFEIKTIRHERMSVLASPEYLKKHPVNQAADLIHHALILSESPLIQWPQWFASQQLPQPDKEWLFRFDRSYMSLEAAMLGHGLIFESELLAEDYLRSGKLVRVLSEQESLPVSAHHLVFPRGFAQFPRVAHFLSWIQQELKVLI
>NZ_CP016890.1|WP_031591158.1|465027_466479_-|sugar-porter-family-MFS-transporter
MSTNTPDSGEAGDHAPADTVRQRIFLVVLVATMGALAFGYDTGIISGALPYMTSPPDQGGLGLNSFTEGLVASSLVFGAAIGSFLSGFFSDRFGRRITLRSLAVIFVLGSLGTALAPSVNVMVAMRFLLGIAVGGGSSTVPVFIAEIAGPRLRAPLVSRNELMIVTGQLIAYVASTLLSYLLHDEHLWRYMLAIAMVPGLLLFIGTFFVPASPHWLVAEGRLKEAKKILKYLRETPREVRHEMAQMKKQARAAERGPDAKTLIREKWVIRLMVIGVGLGFVAQFTGVNGFMYYTPIILKQTGLGTSASIAATIGNGVVSVVAAIVGIWAVSRFPRRTMLITGLCLVVASQIMLGSVMTFIAPSLMQSYLALGCILLFLFCMQMCISPVYWLMMSELFPMQLRGVLTGGAVSLQWIFNAIVAFGFPPIMEYAGSTTFFIFAAINVGSLIFVMAMVPETRGKSLEEIESHMKEKFGEKPKEAEAS
>NZ_CP016890.1|WP_031591155.1|464121_464682_-|lipid-IV(A)-palmitoyltransferase-PagP
MKILTTTAVFAALLTAAPLHAENTPISSWWNGFTDDVAQTWNAPQHTDLYLPFISWHARFMYDKEKTDNYNENPWGGGLGISRYSDSGNWSALYAMAFKDSHNEWQPIVGYGWEKGWYPGSNQDFRLGAGLTAGITAREDFGNYIPLPIILPLFSAGYKALNVQFTYIPGTYNNGNVLFAWFRYAF
>NZ_CP016890.1|WP_069026875.1|462603_464103_-|alpha/beta-hydrolase
MSRRWKTITRRLWRLAIASGVLLLLLLIVRIYEAERGPELHRWHTWVPHELTVEQLDNATYADYLKAENQLFDEMKQQVSDRLDAEEKTPLNRYYAGSMIYPGHFAQDWNRSYILQPTGTPRGAVVLLHGLTDSPYSLRHVAEAYRQQGYVAVAIRLPGHGTVPAGLTDVDWQDWMAATRLAVREATRLAGKQTPLHLVGFSNGGALAVKYALDSLGDQTLRRPQQLILLSPMIGVTRFARFAGVAGLPSVFPAFSKTAWLNIVPEFNPFKYNSFPVHAARQTYLLTQALQKEILQYARNQQLSGFPPVLTFQSVMDSTVSTPSVIRSLYNYLPVNGSELVLFDINQAVSVSPLFRHSSYTAVNQLLPAARRNYSSTVITNATTTSLEMVTKSVPAGEMQERIQPLSIAYPAGLYSLSHVAIPFPAEDGLYGSAPVKKNEFGISFGTLSLRGESAVLIVGLDSIMRATSNPFYPYMINRIDHHISCSDKPQLAACLSSF
>NZ_CP016890.1|WP_010246820.1|476869_477799_-|RepB-family-plasmid-replication-initiator-protein
MADKDNENKALLEPFLSVTKNSGEVIQLHPNKNNTVQPVALMRLGLFVPTLKSTARGKSGAMASTDATKELKNLTLVKAEGYEKITITGARLDMDNDFKTWAGIIQSFSRYPTKGDTVTLPFIDFVKMCGIPSANSSAALRKRLDASLRRIATNTLSFEGNGKAYHTHLVQSAYYDREKDIVRIQADPKLFELYNFDHKVLLQLRAISRLKRKESAQALYTFLESLPTNPAPISLARLRMRLNLGSKTTTQNHVVRRAMEQLKEIGYLDYSEVKRGRSVFFIIHSRTPKLDGISNLESIDSLDEIEFDD
>NZ_CP016890.1|WP_069026881.1|478258_479629_+|aldehyde-dehydrogenase-family-protein
MTEHALSRNPTTGEILARYPLQNSAELEQTLTESASAFAAWKHSTMTDRVRVLRQLGEQIRLREQDLSRMITLEMGKPIAQARAEVLKCANLCDWYAEHGPAMLADQPTQIADAWQRFRPIGVILAVMPWNFPLWQVLRGAVSMLLAGNTYLLKHAPNVMGSATLMAELFRATDLPAGGFNLINVDNDGVSVAIKDNRIAAVAVTGSVRAGAAIAAQAGAALKKTVLELGGSDPFIVLADADLDEAVKSAVIGRFQNTGQVCMAAKRFIVEAPIAEEFEKRFTAAVQALTMGDPLDENTFLGPMARADLRDELDGQVKATLREGARLVLGGEKVAGQGNYYAPTILADVTSDMTAFRQELFGPVAAIAVARDPQHALEIANDSEFGLSATVWSGNEEIADRLALQLEVGAVFINGNGASDPRVTIGGVKKSGYGRELSHFGVHEFCNVQTVWKNRR
>NZ_CP016890.1|WP_069026882.1|479632_480811_-|FAD-binding-oxidoreductase
MPQRIAVIGAGVLGLAVAQSLSRRGAQVTVFDKNYPGSGTSQISYAWVNANGKEPTSYHDLNAHAIDEHKRWQANHPASPRWLLETGTLEWAADESSLRQLAQRAAKLTTLDYPVEKRSRAALLGTMPELRLDPRVQHAWSFPSECLLYPSLFIASLLADLRTSGGQLVCNNEVTTLTESAQDVHLTLASGDEWRGDQLVLATGRWAPELISQCGLELAMTDANRADPVACSFLAQTQPLPIPLKCNLITPELNVRPDGGGRLMLQALDLDQHADPARPVSPDGLIGKEMLRRLRRLLKNTEGARIERIETGQRSRPSDGLPALGYISESARVYLMVSHSGMTLAPLLGRLVAEEMLSGTASPMLSAFAPHRLLRPLSAVAKTAPAYLPSAQ
>NZ_CP016890.1|WP_069026883.1|480903_482133_-|GTP-binding-protein
MTLSALTSDDPRLPVAVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDMSEINIDAALVRDGGAQLSRTDEKLVEMSNGCICCTLREDLLLEVKRLAQAGRFDHLVIESTGISEPLPVAETFTFEDEGGESLSAYARLDSMITVVDGFNFLRDYRSADDLQSRGESLGAQDERSVVDLLVDQIEFCDLLVLNKTDLLSPAQLHQLKSMLQALNPHALIVNSEFGQVPLDCLLNTGRFDFDRAAQAPGWLQTLRGEHLPESEEYDIRNFVYRARRPFHPQRFWHAVNHQLDNVIRSKGYFWLASRPEYAAMWSQAGAVARQGYAGRWWVSVPRTEWPQDADLLNFIAEQWQEGTGDARQELVFIGIEMDEKSVRAALDHALLTPQEMAAGPEQWITLADPVPAWFDETTA
>NZ_CP016890.1|WP_069026884.1|482253_482592_+|ASCH-domain-containing-protein
MQQLTLVPRLMPAVRSGEKTSTIRWQEGDITMGPLRLVNQQDETDAVIVWVTQVDTLRLSEVAATLGKQEEWPDAVLLEGMREHYPEIRLSSEVQLITHLTPAETLQKLTKP
>NZ_CP016890.1|WP_010246810.1|482592_483141_-|helix-turn-helix-domain-containing-protein
MNTPISIIANALVRERQRAGLSLAEVARRAGIAKSTLSQLEAGNGNPGIETLWSLCVTLNIPFSRLLEPDARRLQVIRRGEGLTVTADLADYQAVLLASCPPGVRRDIYLLEVQPGSERISQPHIPNTIEHIIIAKGRALVGPVDSAVELDVGDYITYPGDELHIFRALEADTMALLVIEHS
>NZ_CP016890.1|WP_033743923.1|483267_483921_+|AzlC-family-ABC-transporter-permease
MQLLDKGVIKAIFLVCLADGIVGLSYGSLASADGFPLWVPLALSTLVLAGASEFLFIGIVAGGGSPFTAAAAGLLVNARHLPFGIAVKDLVGQGPSGWLGCHIMNDESVVFGISQPQLAQRRSAYWLCGIGIGLIWPVSVMIGAAIGQFIPDVSVIGLDAVFPAILIALIFPALRQRRTRIPATVGALLSLLATPLVPAGMPVLFSLLGLLTWRSRK
>NZ_CP016890.1|WP_031591176.1|483917_484241_+|AzlD-domain-containing-protein
MTHQGMIIAGIALLAAGTYLMRFAGVRLGNRLPISERTQQMLSDAATILLLAVAATTTLFEGQHFAGVARVAGVGFALLLAWRRAPLIMIILGAAAMTALLRFLGAP
>NZ_CP016890.1|WP_069026885.1|484348_485251_+|alpha/beta-hydrolase
MNTVRTCFLLMLLTVITVGLTAVPAIARPDMRPLGKNIADTGSAWYRFQSKMFVSQDGERHYRVWLAIPKSDAPPGGYPMLWLLDGNAAMAHLTEPLLKKLSSGTPPVLVAVGYDTHLPFDVAARNYDYTPPNDAPDTLVTQPHGRKGGGSHQFRQLLLNRIVPWAESHAPSNPQRRALWGHSYGGLFVLDTFFHAAWFSHYFSAAPSLSWNHQRILTLARRADAGPLKHLSLYLMEGDGITERRTGHSDDLQQEERALTDILRPSGARLILSRYPGQSHGQILSSSLVDTLEIVSGTRN
>NZ_CP016890.1|WP_069026886.1|485307_486000_+|DJ-1/PfpI-family-protein
MNRPLQIGLLLFPDVTQLDLTGPWEVFARTPGIECHLIWKDRHPVRSDRGLAILPTTTFADCPPLDVICVPGGPGQIALMSDDVTLNFLRQQADQAKCVTSVCTGSLVLGAAGLLKGYRATSHSSSIDQLALLGAEPVSQRVVRDRNRISGAGVTSGIDFALTLVAEIAGDAVAKAVQLQMEYDPEPPFTSGSPHTAPPQEVEQARAKMAEFLATRRAATERAALRLQAD

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Crispr_ID: NZ_CP016890_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016890_2

476264-476366

Orphan

Consensus_repeat	Method
AACGTTCACTGTAATCAGTAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016890_2

>merge|NZ_CP016890|2|476264-476366|CRISPRCasFinder
AACGTTCACTGTAATCAGTAGCGATTCGGAAAGCCGTTAAAGAGATTCAATGGTGAGGCGAGGGTAGTGCCCATCAGCAAACATTCACTGTAATCAGTAACAG

>NZ_CP016890|2|2|476264-476366|CRISPRCasFinder
AACGTTCACTGTAATCAGTAGCG	ATTCGGAAAGCCGTTAAAGAGATTCAATGGTGAGGCGAGGGTAGTGCCCATCAGCA
AACATTCACTGTAATCAGTAACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016890.1\|WP_069026885.1\|484348_485251_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NZ_CP016890.1\|WP_069026877.1\|468582_469881_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP016890.1\|WP_031591167.1\|473856_475056_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|376033
NZ_CP016890.1\|WP_010246810.1\|482592_483141_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP016890.1\|WP_069026883.1\|480903_482133_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP016890.1\|WP_033743923.1\|483267_483921_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP016890.1\|WP_069026884.1\|482253_482592_+\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|119344
NZ_CP016890.1\|WP_069026880.1\|472877_473849_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|370113
NZ_CP016890.1\|WP_069026876.1\|466678_467581_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP016890.1\|WP_010246820.1\|476869_477799_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	unknown
NZ_CP016890.1\|WP_069026878.1\|469893_470736_+\|transketolase	unknown	unknown	gnl\|CDD\|238970
NZ_CP016890.1\|WP_031591161.1\|467778_468528_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP016890.1\|WP_069026886.1\|485307_486000_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153233
NZ_CP016890.1\|WP_069026882.1\|479632_480811_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP016890.1\|WP_069026875.1\|462603_464103_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP016890.1\|WP_069026881.1\|478258_479629_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|184426
NZ_CP016890.1\|WP_031591176.1\|483917_484241_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377512
NZ_CP016890.1\|WP_069026879.1\|470737_471748_+\|transketolase-family-protein	unknown	unknown	gnl\|CDD\|226467
NZ_CP016890.1\|WP_031591155.1\|464121_464682_-\|lipid-IV(A)-palmitoyltransferase-PagP	unknown	unknown	gnl\|CDD\|236829
NZ_CP016890.1\|WP_031591158.1\|465027_466479_-\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917

Protein	Function_ID	Function_description	E-value
NZ_CP016890.1\|WP_069026885.1\|484348_485251_+\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	1.00087e-62
NZ_CP016890.1\|WP_069026877.1\|468582_469881_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.86466e-101
NZ_CP016890.1\|WP_031591167.1\|473856_475056_-\|AAA-family-ATPase	gnl\|CDD\|376033	pfam18607, HTH_54, ParA helix turn helix domain. The accurate segregation of DNA is essential for the faithful inheritance of genetic information. Segregation of the prototypical P1 plasmid par system requires two proteins, ParA and ParB, and a centromere. When bound to ATP, ParA mediates segregation by interacting with centromere-bound ParB, but when bound to ADP, ParA fulfills a different function: DNA-binding transcription autoregulation. ParA consists of an elongated N-terminal alpha-helix which mediates dimerization, a winged-HTH and a Walker-box containing C-domain. This entry describes the N-terminal alpha helix domain combined with the winged HTH region.	8.39702e-55
NZ_CP016890.1\|WP_010246810.1\|482592_483141_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.40304e-12
NZ_CP016890.1\|WP_069026883.1\|480903_482133_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	7.71089e-116
NZ_CP016890.1\|WP_033743923.1\|483267_483921_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	4.7943e-38
NZ_CP016890.1\|WP_069026884.1\|482253_482592_+\|ASCH-domain-containing-protein	gnl\|CDD\|119344	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation.	1.08436e-10
NZ_CP016890.1\|WP_069026880.1\|472877_473849_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|370113	pfam08775, ParB, ParB family. ParB is a component of the par system which mediates accurate DNA partition during cell division. It recognizes A-box and B-box DNA motifs. ParB forms an asymmetric dimer with 2 extended helix-turn-helix (HTH) motifs that bind to A-boxes. The HTH motifs emanate from a beta sheet coiled coil DNA binding module. Both DNA binding elements are free to rotate around a flexible linker, this enables them to bind to complex arrays of A- and B-box elements on adjacent DNA arms of the looped partition site.	9.30804e-50
NZ_CP016890.1\|WP_069026876.1\|466678_467581_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	5.1026e-63
NZ_CP016890.1\|WP_069026878.1\|469893_470736_+\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	2.18909e-124
NZ_CP016890.1\|WP_031591161.1\|467778_468528_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	1.28205e-88
NZ_CP016890.1\|WP_069026886.1\|485307_486000_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153233	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	4.20488e-89
NZ_CP016890.1\|WP_069026882.1\|479632_480811_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.01734e-38
NZ_CP016890.1\|WP_069026875.1\|462603_464103_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	3.9787e-22
NZ_CP016890.1\|WP_069026881.1\|478258_479629_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|184426	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional.	0
NZ_CP016890.1\|WP_031591176.1\|483917_484241_+\|AzlD-domain-containing-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	4.24654e-07
NZ_CP016890.1\|WP_069026879.1\|470737_471748_+\|transketolase-family-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	9.44893e-138
NZ_CP016890.1\|WP_031591155.1\|464121_464682_-\|lipid-IV(A)-palmitoyltransferase-PagP	gnl\|CDD\|236829	PRK11045, pagP, lipid IV(A) palmitoyltransferase PagP.	1.00204e-96
NZ_CP016890.1\|WP_031591158.1\|465027_466479_-\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.215e-123

>NZ_CP016890.1|WP_031591167.1|473856_475056_-|AAA-family-ATPase
MANDDKQVMKVAQRSERMLLSLTEQIQAQKQELHENTYYQVYAKAALAKLPKLTRASVDYAVNEMEESGYQFDKRAAGSSVKYAMSIQNIIDIYHHRGVPKYRDRHTDAYTLFVGNLKGGVSKTVSTVSLAHALRAHPHLLFEDLRILVIDLDPQSSATMFLNHERSVGLVEATAAQAMLQNVSRDELVNEFIVPSIIPGVDVLPASIDDAFIASSWDQLCAEHLPQQNVHAVLYDNVIAKLKKDYDFIFIDSGPHLDAFLKNAIAASDLLMTPVPPAQVDFHSTLKYLTRLPELIAIIEDSGATCRLQGNIGFMSKLSNKADHKLCHSLAKEIFGGDMLDAALPRLDGFERCGESFDTVISANPSTYVGSSEALKNARSAAEDFAKAVFDRIEFIRLN
>NZ_CP016890.1|WP_069026880.1|472877_473849_-|ParB/RepB/Spo0J-family-partition-protein
MSAKRITIGRTFSQTPLENDTPDSQHNQTFVLATGKRALFRFERIAASDVESKTFVTMETNGRDQAGLTPDSLRDIIRTIKLQQFFPAIGVMRNDRIEILDGSRRRAAALYCKTGLDVLITDAAITADEARRLAQDIQTAREHNLREVGMRLLTLKDGGLSQKEIAENQGLSQAKVTRALQAASVPSDLISLFPNHAELTYPDYKALLQAADKLSESGQSVEALIKSISREIDVVCAREGLAEDELKNHILRLIRQGSQTLIKEPEKDKTQATALWSFADKDRFARKKVRGRMFSYEFNRQSKELQEELDKVIAETLKKYLNR
>NZ_CP016890.1|WP_069026879.1|470737_471748_+|transketolase-family-protein
MSSQPQKKRLTTSAMIASIAAEGQPTVSAPFGHALVSLAEQRSDVVGMTADLSKYTDLHLFAEAFPKRFYQMGMAEQLLMSAAAGMAREGFMPFVTTYAVFASRRAYDFICMAIAEENLNVKIACALPGLTTGYGPSHQATDDLAIFRGMPNLTIIDPCDALEISQVIPAIAEHQGPVYLRLLRGKVPLVLDKYDYRYQHGKAQRLRGGKHAVIISSGLMTMRALEAAETLEKQGIEVGVVHSPMIKPLDEETILREAGEAVHHHQLVITAENHSITGGLGEAIAGLLMRNHVTPRFKQIALPDAFLAAGALPTLHDRYGISTDAMVKQITAWLEA
>NZ_CP016890.1|WP_069026878.1|469893_470736_+|transketolase
MTDSRHDSHMISLQQRATNIRRHALLMGQIQGQGYIGQALGAADLLAVSYFHAMNYRPDQPEWEERDRFYLSIGHYAIALYAALLEAGVIPEEERETYGTDESRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGLKQKGSQARVYNLLSDGELNEGSTWEAAMSASHWQLDNLIALIDVNNQQADGHSSEILAFEPIVDRWQAFGWYTQRVDGNDISALQAAFDAARSWPEPQPRVIICDTRMGKGVPFLESREKTHFIRVDADEWDKALTALEQGV
>NZ_CP016890.1|WP_069026877.1|468582_469881_+|MFS-transporter
MTTLNLSAASAARDITYRKIAWRLMPWLMLCYLCAYLDRVNVGFAKLQMMDDLSLSETVYGLGAGIFFIGYFFFEVPSNLILHRVGARRWIARIMITWGIISALFAFVETAWQFYLLRFLLGVAEAGLAPGLLLYLTYWFPSHRRARMTVLWFVAIPLSGMIGGPLSGWIMATFAGFHGWAGWQWMFMLEAIPTLVMGLVVLLVLKDRVEQAEWLDEDEKRRVRADLDEDNQQKACHGTVKAFVADRRLWLLTLIYFCVVMGQYALTFWLPTLVRNSGVSEPLHIGLLTSLPYLCAIIFMLLAGRSGDRYRERRWHLIVPMLIGLSGLTLATLLSHSVSLSLLSLCIAAAGILSASSLFWMLPTNLLGGVSAAAGIAAVNCIANLAGFFSPWLIGTITTATGTPASGMYFIAAVLLGGALCVLRIRAADVNR
>NZ_CP016890.1|WP_031591161.1|467778_468528_+|SDR-family-oxidoreductase
MLLENKVAIITGAASQRGIGRATAACFAQHGARVVVLDLDLQAAQASALSCGEGHLGLAADVTDPLSVRRAIDQILEHFGRIDVLVNNAGITQPVKTLEIGIEDYNRILDVNLRGTLLMSQAVIPTMQQQKGGSIVCLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMAREFGPDQIRINALTPGLIQTDITGGLLQDERRHAILDGIPLGRLGSASDVANAALFLASDLSGYLTGITLDVNGGMLIH
>NZ_CP016890.1|WP_069026876.1|466678_467581_-|LysR-family-transcriptional-regulator
MEKQSDHLPSIKSLRVFEQVAHFGNVARAAEELSIKPSAASHQLAKLERELGCILFNRSAKGVVLTLSGEHYLREIGPILLSLTQATARISNEKARSNLRIHCAPSFGLLWLLPRIHKFRDSYPEFQLTLSCSYENLSFSRDNIDIAIRHGFPDWNSFEIKTIRHERMSVLASPEYLKKHPVNQAADLIHHALILSESPLIQWPQWFASQQLPQPDKEWLFRFDRSYMSLEAAMLGHGLIFESELLAEDYLRSGKLVRVLSEQESLPVSAHHLVFPRGFAQFPRVAHFLSWIQQELKVLI
>NZ_CP016890.1|WP_031591158.1|465027_466479_-|sugar-porter-family-MFS-transporter
MSTNTPDSGEAGDHAPADTVRQRIFLVVLVATMGALAFGYDTGIISGALPYMTSPPDQGGLGLNSFTEGLVASSLVFGAAIGSFLSGFFSDRFGRRITLRSLAVIFVLGSLGTALAPSVNVMVAMRFLLGIAVGGGSSTVPVFIAEIAGPRLRAPLVSRNELMIVTGQLIAYVASTLLSYLLHDEHLWRYMLAIAMVPGLLLFIGTFFVPASPHWLVAEGRLKEAKKILKYLRETPREVRHEMAQMKKQARAAERGPDAKTLIREKWVIRLMVIGVGLGFVAQFTGVNGFMYYTPIILKQTGLGTSASIAATIGNGVVSVVAAIVGIWAVSRFPRRTMLITGLCLVVASQIMLGSVMTFIAPSLMQSYLALGCILLFLFCMQMCISPVYWLMMSELFPMQLRGVLTGGAVSLQWIFNAIVAFGFPPIMEYAGSTTFFIFAAINVGSLIFVMAMVPETRGKSLEEIESHMKEKFGEKPKEAEAS
>NZ_CP016890.1|WP_031591155.1|464121_464682_-|lipid-IV(A)-palmitoyltransferase-PagP
MKILTTTAVFAALLTAAPLHAENTPISSWWNGFTDDVAQTWNAPQHTDLYLPFISWHARFMYDKEKTDNYNENPWGGGLGISRYSDSGNWSALYAMAFKDSHNEWQPIVGYGWEKGWYPGSNQDFRLGAGLTAGITAREDFGNYIPLPIILPLFSAGYKALNVQFTYIPGTYNNGNVLFAWFRYAF
>NZ_CP016890.1|WP_069026875.1|462603_464103_-|alpha/beta-hydrolase
MSRRWKTITRRLWRLAIASGVLLLLLLIVRIYEAERGPELHRWHTWVPHELTVEQLDNATYADYLKAENQLFDEMKQQVSDRLDAEEKTPLNRYYAGSMIYPGHFAQDWNRSYILQPTGTPRGAVVLLHGLTDSPYSLRHVAEAYRQQGYVAVAIRLPGHGTVPAGLTDVDWQDWMAATRLAVREATRLAGKQTPLHLVGFSNGGALAVKYALDSLGDQTLRRPQQLILLSPMIGVTRFARFAGVAGLPSVFPAFSKTAWLNIVPEFNPFKYNSFPVHAARQTYLLTQALQKEILQYARNQQLSGFPPVLTFQSVMDSTVSTPSVIRSLYNYLPVNGSELVLFDINQAVSVSPLFRHSSYTAVNQLLPAARRNYSSTVITNATTTSLEMVTKSVPAGEMQERIQPLSIAYPAGLYSLSHVAIPFPAEDGLYGSAPVKKNEFGISFGTLSLRGESAVLIVGLDSIMRATSNPFYPYMINRIDHHISCSDKPQLAACLSSF
>NZ_CP016890.1|WP_010246820.1|476869_477799_-|RepB-family-plasmid-replication-initiator-protein
MADKDNENKALLEPFLSVTKNSGEVIQLHPNKNNTVQPVALMRLGLFVPTLKSTARGKSGAMASTDATKELKNLTLVKAEGYEKITITGARLDMDNDFKTWAGIIQSFSRYPTKGDTVTLPFIDFVKMCGIPSANSSAALRKRLDASLRRIATNTLSFEGNGKAYHTHLVQSAYYDREKDIVRIQADPKLFELYNFDHKVLLQLRAISRLKRKESAQALYTFLESLPTNPAPISLARLRMRLNLGSKTTTQNHVVRRAMEQLKEIGYLDYSEVKRGRSVFFIIHSRTPKLDGISNLESIDSLDEIEFDD
>NZ_CP016890.1|WP_069026881.1|478258_479629_+|aldehyde-dehydrogenase-family-protein
MTEHALSRNPTTGEILARYPLQNSAELEQTLTESASAFAAWKHSTMTDRVRVLRQLGEQIRLREQDLSRMITLEMGKPIAQARAEVLKCANLCDWYAEHGPAMLADQPTQIADAWQRFRPIGVILAVMPWNFPLWQVLRGAVSMLLAGNTYLLKHAPNVMGSATLMAELFRATDLPAGGFNLINVDNDGVSVAIKDNRIAAVAVTGSVRAGAAIAAQAGAALKKTVLELGGSDPFIVLADADLDEAVKSAVIGRFQNTGQVCMAAKRFIVEAPIAEEFEKRFTAAVQALTMGDPLDENTFLGPMARADLRDELDGQVKATLREGARLVLGGEKVAGQGNYYAPTILADVTSDMTAFRQELFGPVAAIAVARDPQHALEIANDSEFGLSATVWSGNEEIADRLALQLEVGAVFINGNGASDPRVTIGGVKKSGYGRELSHFGVHEFCNVQTVWKNRR
>NZ_CP016890.1|WP_069026882.1|479632_480811_-|FAD-binding-oxidoreductase
MPQRIAVIGAGVLGLAVAQSLSRRGAQVTVFDKNYPGSGTSQISYAWVNANGKEPTSYHDLNAHAIDEHKRWQANHPASPRWLLETGTLEWAADESSLRQLAQRAAKLTTLDYPVEKRSRAALLGTMPELRLDPRVQHAWSFPSECLLYPSLFIASLLADLRTSGGQLVCNNEVTTLTESAQDVHLTLASGDEWRGDQLVLATGRWAPELISQCGLELAMTDANRADPVACSFLAQTQPLPIPLKCNLITPELNVRPDGGGRLMLQALDLDQHADPARPVSPDGLIGKEMLRRLRRLLKNTEGARIERIETGQRSRPSDGLPALGYISESARVYLMVSHSGMTLAPLLGRLVAEEMLSGTASPMLSAFAPHRLLRPLSAVAKTAPAYLPSAQ
>NZ_CP016890.1|WP_069026883.1|480903_482133_-|GTP-binding-protein
MTLSALTSDDPRLPVAVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDMSEINIDAALVRDGGAQLSRTDEKLVEMSNGCICCTLREDLLLEVKRLAQAGRFDHLVIESTGISEPLPVAETFTFEDEGGESLSAYARLDSMITVVDGFNFLRDYRSADDLQSRGESLGAQDERSVVDLLVDQIEFCDLLVLNKTDLLSPAQLHQLKSMLQALNPHALIVNSEFGQVPLDCLLNTGRFDFDRAAQAPGWLQTLRGEHLPESEEYDIRNFVYRARRPFHPQRFWHAVNHQLDNVIRSKGYFWLASRPEYAAMWSQAGAVARQGYAGRWWVSVPRTEWPQDADLLNFIAEQWQEGTGDARQELVFIGIEMDEKSVRAALDHALLTPQEMAAGPEQWITLADPVPAWFDETTA
>NZ_CP016890.1|WP_069026884.1|482253_482592_+|ASCH-domain-containing-protein
MQQLTLVPRLMPAVRSGEKTSTIRWQEGDITMGPLRLVNQQDETDAVIVWVTQVDTLRLSEVAATLGKQEEWPDAVLLEGMREHYPEIRLSSEVQLITHLTPAETLQKLTKP
>NZ_CP016890.1|WP_010246810.1|482592_483141_-|helix-turn-helix-domain-containing-protein
MNTPISIIANALVRERQRAGLSLAEVARRAGIAKSTLSQLEAGNGNPGIETLWSLCVTLNIPFSRLLEPDARRLQVIRRGEGLTVTADLADYQAVLLASCPPGVRRDIYLLEVQPGSERISQPHIPNTIEHIIIAKGRALVGPVDSAVELDVGDYITYPGDELHIFRALEADTMALLVIEHS
>NZ_CP016890.1|WP_033743923.1|483267_483921_+|AzlC-family-ABC-transporter-permease
MQLLDKGVIKAIFLVCLADGIVGLSYGSLASADGFPLWVPLALSTLVLAGASEFLFIGIVAGGGSPFTAAAAGLLVNARHLPFGIAVKDLVGQGPSGWLGCHIMNDESVVFGISQPQLAQRRSAYWLCGIGIGLIWPVSVMIGAAIGQFIPDVSVIGLDAVFPAILIALIFPALRQRRTRIPATVGALLSLLATPLVPAGMPVLFSLLGLLTWRSRK
>NZ_CP016890.1|WP_031591176.1|483917_484241_+|AzlD-domain-containing-protein
MTHQGMIIAGIALLAAGTYLMRFAGVRLGNRLPISERTQQMLSDAATILLLAVAATTTLFEGQHFAGVARVAGVGFALLLAWRRAPLIMIILGAAAMTALLRFLGAP
>NZ_CP016890.1|WP_069026885.1|484348_485251_+|alpha/beta-hydrolase
MNTVRTCFLLMLLTVITVGLTAVPAIARPDMRPLGKNIADTGSAWYRFQSKMFVSQDGERHYRVWLAIPKSDAPPGGYPMLWLLDGNAAMAHLTEPLLKKLSSGTPPVLVAVGYDTHLPFDVAARNYDYTPPNDAPDTLVTQPHGRKGGGSHQFRQLLLNRIVPWAESHAPSNPQRRALWGHSYGGLFVLDTFFHAAWFSHYFSAAPSLSWNHQRILTLARRADAGPLKHLSLYLMEGDGITERRTGHSDDLQQEERALTDILRPSGARLILSRYPGQSHGQILSSSLVDTLEIVSGTRN
>NZ_CP016890.1|WP_069026886.1|485307_486000_+|DJ-1/PfpI-family-protein
MNRPLQIGLLLFPDVTQLDLTGPWEVFARTPGIECHLIWKDRHPVRSDRGLAILPTTTFADCPPLDVICVPGGPGQIALMSDDVTLNFLRQQADQAKCVTSVCTGSLVLGAAGLLKGYRATSHSSSIDQLALLGAEPVSQRVVRDRNRISGAGVTSGIDFALTLVAEIAGDAVAKAVQLQMEYDPEPPFTSGSPHTAPPQEVEQARAKMAEFLATRRAATERAALRLQAD

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Crispr_ID: NZ_CP016890_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016890_3

476513-476605

Orphan

Consensus_repeat	Method
AACGTTCACTGTAATCAGTAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016890_3

>merge|NZ_CP016890|3|476513-476605|CRISPRCasFinder
GGCATTCACTGTAGTCAGTAAAAAGGATTCACTGTAATCAGCAGAGAGAGGCTTAGCCAACCGAAGTCAGGGCATTCACTGTAATCAGTAAAC

>NZ_CP016890|3|3|476513-476605|CRISPRCasFinder
GGCATTCACTGTAGTCAGTAAAA	AGGATTCACTGTAATCAGCAGAGAGAGGCTTAGCCAACCGAAGTCAG
GGCATTCACTGTAATCAGTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016890.1\|WP_069026885.1\|484348_485251_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NZ_CP016890.1\|WP_069026877.1\|468582_469881_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP016890.1\|WP_031591167.1\|473856_475056_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|376033
NZ_CP016890.1\|WP_010246810.1\|482592_483141_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP016890.1\|WP_069026883.1\|480903_482133_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP016890.1\|WP_033743923.1\|483267_483921_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP016890.1\|WP_069026884.1\|482253_482592_+\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|119344
NZ_CP016890.1\|WP_069026880.1\|472877_473849_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|370113
NZ_CP016890.1\|WP_069026876.1\|466678_467581_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP016890.1\|WP_010246820.1\|476869_477799_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	unknown
NZ_CP016890.1\|WP_069026878.1\|469893_470736_+\|transketolase	unknown	unknown	gnl\|CDD\|238970
NZ_CP016890.1\|WP_031591161.1\|467778_468528_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP016890.1\|WP_069026886.1\|485307_486000_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153233
NZ_CP016890.1\|WP_069026882.1\|479632_480811_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP016890.1\|WP_069026875.1\|462603_464103_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP016890.1\|WP_069026881.1\|478258_479629_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|184426
NZ_CP016890.1\|WP_031591176.1\|483917_484241_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377512
NZ_CP016890.1\|WP_069026879.1\|470737_471748_+\|transketolase-family-protein	unknown	unknown	gnl\|CDD\|226467
NZ_CP016890.1\|WP_031591155.1\|464121_464682_-\|lipid-IV(A)-palmitoyltransferase-PagP	unknown	unknown	gnl\|CDD\|236829
NZ_CP016890.1\|WP_031591158.1\|465027_466479_-\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917

Protein	Function_ID	Function_description	E-value
NZ_CP016890.1\|WP_069026885.1\|484348_485251_+\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	1.00087e-62
NZ_CP016890.1\|WP_069026877.1\|468582_469881_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.86466e-101
NZ_CP016890.1\|WP_031591167.1\|473856_475056_-\|AAA-family-ATPase	gnl\|CDD\|376033	pfam18607, HTH_54, ParA helix turn helix domain. The accurate segregation of DNA is essential for the faithful inheritance of genetic information. Segregation of the prototypical P1 plasmid par system requires two proteins, ParA and ParB, and a centromere. When bound to ATP, ParA mediates segregation by interacting with centromere-bound ParB, but when bound to ADP, ParA fulfills a different function: DNA-binding transcription autoregulation. ParA consists of an elongated N-terminal alpha-helix which mediates dimerization, a winged-HTH and a Walker-box containing C-domain. This entry describes the N-terminal alpha helix domain combined with the winged HTH region.	8.39702e-55
NZ_CP016890.1\|WP_010246810.1\|482592_483141_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.40304e-12
NZ_CP016890.1\|WP_069026883.1\|480903_482133_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	7.71089e-116
NZ_CP016890.1\|WP_033743923.1\|483267_483921_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	4.7943e-38
NZ_CP016890.1\|WP_069026884.1\|482253_482592_+\|ASCH-domain-containing-protein	gnl\|CDD\|119344	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation.	1.08436e-10
NZ_CP016890.1\|WP_069026880.1\|472877_473849_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|370113	pfam08775, ParB, ParB family. ParB is a component of the par system which mediates accurate DNA partition during cell division. It recognizes A-box and B-box DNA motifs. ParB forms an asymmetric dimer with 2 extended helix-turn-helix (HTH) motifs that bind to A-boxes. The HTH motifs emanate from a beta sheet coiled coil DNA binding module. Both DNA binding elements are free to rotate around a flexible linker, this enables them to bind to complex arrays of A- and B-box elements on adjacent DNA arms of the looped partition site.	9.30804e-50
NZ_CP016890.1\|WP_069026876.1\|466678_467581_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	5.1026e-63
NZ_CP016890.1\|WP_069026878.1\|469893_470736_+\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	2.18909e-124
NZ_CP016890.1\|WP_031591161.1\|467778_468528_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	1.28205e-88
NZ_CP016890.1\|WP_069026886.1\|485307_486000_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153233	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	4.20488e-89
NZ_CP016890.1\|WP_069026882.1\|479632_480811_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.01734e-38
NZ_CP016890.1\|WP_069026875.1\|462603_464103_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	3.9787e-22
NZ_CP016890.1\|WP_069026881.1\|478258_479629_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|184426	PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional.	0
NZ_CP016890.1\|WP_031591176.1\|483917_484241_+\|AzlD-domain-containing-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	4.24654e-07
NZ_CP016890.1\|WP_069026879.1\|470737_471748_+\|transketolase-family-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	9.44893e-138
NZ_CP016890.1\|WP_031591155.1\|464121_464682_-\|lipid-IV(A)-palmitoyltransferase-PagP	gnl\|CDD\|236829	PRK11045, pagP, lipid IV(A) palmitoyltransferase PagP.	1.00204e-96
NZ_CP016890.1\|WP_031591158.1\|465027_466479_-\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.215e-123

>NZ_CP016890.1|WP_031591167.1|473856_475056_-|AAA-family-ATPase
MANDDKQVMKVAQRSERMLLSLTEQIQAQKQELHENTYYQVYAKAALAKLPKLTRASVDYAVNEMEESGYQFDKRAAGSSVKYAMSIQNIIDIYHHRGVPKYRDRHTDAYTLFVGNLKGGVSKTVSTVSLAHALRAHPHLLFEDLRILVIDLDPQSSATMFLNHERSVGLVEATAAQAMLQNVSRDELVNEFIVPSIIPGVDVLPASIDDAFIASSWDQLCAEHLPQQNVHAVLYDNVIAKLKKDYDFIFIDSGPHLDAFLKNAIAASDLLMTPVPPAQVDFHSTLKYLTRLPELIAIIEDSGATCRLQGNIGFMSKLSNKADHKLCHSLAKEIFGGDMLDAALPRLDGFERCGESFDTVISANPSTYVGSSEALKNARSAAEDFAKAVFDRIEFIRLN
>NZ_CP016890.1|WP_069026880.1|472877_473849_-|ParB/RepB/Spo0J-family-partition-protein
MSAKRITIGRTFSQTPLENDTPDSQHNQTFVLATGKRALFRFERIAASDVESKTFVTMETNGRDQAGLTPDSLRDIIRTIKLQQFFPAIGVMRNDRIEILDGSRRRAAALYCKTGLDVLITDAAITADEARRLAQDIQTAREHNLREVGMRLLTLKDGGLSQKEIAENQGLSQAKVTRALQAASVPSDLISLFPNHAELTYPDYKALLQAADKLSESGQSVEALIKSISREIDVVCAREGLAEDELKNHILRLIRQGSQTLIKEPEKDKTQATALWSFADKDRFARKKVRGRMFSYEFNRQSKELQEELDKVIAETLKKYLNR
>NZ_CP016890.1|WP_069026879.1|470737_471748_+|transketolase-family-protein
MSSQPQKKRLTTSAMIASIAAEGQPTVSAPFGHALVSLAEQRSDVVGMTADLSKYTDLHLFAEAFPKRFYQMGMAEQLLMSAAAGMAREGFMPFVTTYAVFASRRAYDFICMAIAEENLNVKIACALPGLTTGYGPSHQATDDLAIFRGMPNLTIIDPCDALEISQVIPAIAEHQGPVYLRLLRGKVPLVLDKYDYRYQHGKAQRLRGGKHAVIISSGLMTMRALEAAETLEKQGIEVGVVHSPMIKPLDEETILREAGEAVHHHQLVITAENHSITGGLGEAIAGLLMRNHVTPRFKQIALPDAFLAAGALPTLHDRYGISTDAMVKQITAWLEA
>NZ_CP016890.1|WP_069026878.1|469893_470736_+|transketolase
MTDSRHDSHMISLQQRATNIRRHALLMGQIQGQGYIGQALGAADLLAVSYFHAMNYRPDQPEWEERDRFYLSIGHYAIALYAALLEAGVIPEEERETYGTDESRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGLKQKGSQARVYNLLSDGELNEGSTWEAAMSASHWQLDNLIALIDVNNQQADGHSSEILAFEPIVDRWQAFGWYTQRVDGNDISALQAAFDAARSWPEPQPRVIICDTRMGKGVPFLESREKTHFIRVDADEWDKALTALEQGV
>NZ_CP016890.1|WP_069026877.1|468582_469881_+|MFS-transporter
MTTLNLSAASAARDITYRKIAWRLMPWLMLCYLCAYLDRVNVGFAKLQMMDDLSLSETVYGLGAGIFFIGYFFFEVPSNLILHRVGARRWIARIMITWGIISALFAFVETAWQFYLLRFLLGVAEAGLAPGLLLYLTYWFPSHRRARMTVLWFVAIPLSGMIGGPLSGWIMATFAGFHGWAGWQWMFMLEAIPTLVMGLVVLLVLKDRVEQAEWLDEDEKRRVRADLDEDNQQKACHGTVKAFVADRRLWLLTLIYFCVVMGQYALTFWLPTLVRNSGVSEPLHIGLLTSLPYLCAIIFMLLAGRSGDRYRERRWHLIVPMLIGLSGLTLATLLSHSVSLSLLSLCIAAAGILSASSLFWMLPTNLLGGVSAAAGIAAVNCIANLAGFFSPWLIGTITTATGTPASGMYFIAAVLLGGALCVLRIRAADVNR
>NZ_CP016890.1|WP_031591161.1|467778_468528_+|SDR-family-oxidoreductase
MLLENKVAIITGAASQRGIGRATAACFAQHGARVVVLDLDLQAAQASALSCGEGHLGLAADVTDPLSVRRAIDQILEHFGRIDVLVNNAGITQPVKTLEIGIEDYNRILDVNLRGTLLMSQAVIPTMQQQKGGSIVCLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKAMAREFGPDQIRINALTPGLIQTDITGGLLQDERRHAILDGIPLGRLGSASDVANAALFLASDLSGYLTGITLDVNGGMLIH
>NZ_CP016890.1|WP_069026876.1|466678_467581_-|LysR-family-transcriptional-regulator
MEKQSDHLPSIKSLRVFEQVAHFGNVARAAEELSIKPSAASHQLAKLERELGCILFNRSAKGVVLTLSGEHYLREIGPILLSLTQATARISNEKARSNLRIHCAPSFGLLWLLPRIHKFRDSYPEFQLTLSCSYENLSFSRDNIDIAIRHGFPDWNSFEIKTIRHERMSVLASPEYLKKHPVNQAADLIHHALILSESPLIQWPQWFASQQLPQPDKEWLFRFDRSYMSLEAAMLGHGLIFESELLAEDYLRSGKLVRVLSEQESLPVSAHHLVFPRGFAQFPRVAHFLSWIQQELKVLI
>NZ_CP016890.1|WP_031591158.1|465027_466479_-|sugar-porter-family-MFS-transporter
MSTNTPDSGEAGDHAPADTVRQRIFLVVLVATMGALAFGYDTGIISGALPYMTSPPDQGGLGLNSFTEGLVASSLVFGAAIGSFLSGFFSDRFGRRITLRSLAVIFVLGSLGTALAPSVNVMVAMRFLLGIAVGGGSSTVPVFIAEIAGPRLRAPLVSRNELMIVTGQLIAYVASTLLSYLLHDEHLWRYMLAIAMVPGLLLFIGTFFVPASPHWLVAEGRLKEAKKILKYLRETPREVRHEMAQMKKQARAAERGPDAKTLIREKWVIRLMVIGVGLGFVAQFTGVNGFMYYTPIILKQTGLGTSASIAATIGNGVVSVVAAIVGIWAVSRFPRRTMLITGLCLVVASQIMLGSVMTFIAPSLMQSYLALGCILLFLFCMQMCISPVYWLMMSELFPMQLRGVLTGGAVSLQWIFNAIVAFGFPPIMEYAGSTTFFIFAAINVGSLIFVMAMVPETRGKSLEEIESHMKEKFGEKPKEAEAS
>NZ_CP016890.1|WP_031591155.1|464121_464682_-|lipid-IV(A)-palmitoyltransferase-PagP
MKILTTTAVFAALLTAAPLHAENTPISSWWNGFTDDVAQTWNAPQHTDLYLPFISWHARFMYDKEKTDNYNENPWGGGLGISRYSDSGNWSALYAMAFKDSHNEWQPIVGYGWEKGWYPGSNQDFRLGAGLTAGITAREDFGNYIPLPIILPLFSAGYKALNVQFTYIPGTYNNGNVLFAWFRYAF
>NZ_CP016890.1|WP_069026875.1|462603_464103_-|alpha/beta-hydrolase
MSRRWKTITRRLWRLAIASGVLLLLLLIVRIYEAERGPELHRWHTWVPHELTVEQLDNATYADYLKAENQLFDEMKQQVSDRLDAEEKTPLNRYYAGSMIYPGHFAQDWNRSYILQPTGTPRGAVVLLHGLTDSPYSLRHVAEAYRQQGYVAVAIRLPGHGTVPAGLTDVDWQDWMAATRLAVREATRLAGKQTPLHLVGFSNGGALAVKYALDSLGDQTLRRPQQLILLSPMIGVTRFARFAGVAGLPSVFPAFSKTAWLNIVPEFNPFKYNSFPVHAARQTYLLTQALQKEILQYARNQQLSGFPPVLTFQSVMDSTVSTPSVIRSLYNYLPVNGSELVLFDINQAVSVSPLFRHSSYTAVNQLLPAARRNYSSTVITNATTTSLEMVTKSVPAGEMQERIQPLSIAYPAGLYSLSHVAIPFPAEDGLYGSAPVKKNEFGISFGTLSLRGESAVLIVGLDSIMRATSNPFYPYMINRIDHHISCSDKPQLAACLSSF
>NZ_CP016890.1|WP_010246820.1|476869_477799_-|RepB-family-plasmid-replication-initiator-protein
MADKDNENKALLEPFLSVTKNSGEVIQLHPNKNNTVQPVALMRLGLFVPTLKSTARGKSGAMASTDATKELKNLTLVKAEGYEKITITGARLDMDNDFKTWAGIIQSFSRYPTKGDTVTLPFIDFVKMCGIPSANSSAALRKRLDASLRRIATNTLSFEGNGKAYHTHLVQSAYYDREKDIVRIQADPKLFELYNFDHKVLLQLRAISRLKRKESAQALYTFLESLPTNPAPISLARLRMRLNLGSKTTTQNHVVRRAMEQLKEIGYLDYSEVKRGRSVFFIIHSRTPKLDGISNLESIDSLDEIEFDD
>NZ_CP016890.1|WP_069026881.1|478258_479629_+|aldehyde-dehydrogenase-family-protein
MTEHALSRNPTTGEILARYPLQNSAELEQTLTESASAFAAWKHSTMTDRVRVLRQLGEQIRLREQDLSRMITLEMGKPIAQARAEVLKCANLCDWYAEHGPAMLADQPTQIADAWQRFRPIGVILAVMPWNFPLWQVLRGAVSMLLAGNTYLLKHAPNVMGSATLMAELFRATDLPAGGFNLINVDNDGVSVAIKDNRIAAVAVTGSVRAGAAIAAQAGAALKKTVLELGGSDPFIVLADADLDEAVKSAVIGRFQNTGQVCMAAKRFIVEAPIAEEFEKRFTAAVQALTMGDPLDENTFLGPMARADLRDELDGQVKATLREGARLVLGGEKVAGQGNYYAPTILADVTSDMTAFRQELFGPVAAIAVARDPQHALEIANDSEFGLSATVWSGNEEIADRLALQLEVGAVFINGNGASDPRVTIGGVKKSGYGRELSHFGVHEFCNVQTVWKNRR
>NZ_CP016890.1|WP_069026882.1|479632_480811_-|FAD-binding-oxidoreductase
MPQRIAVIGAGVLGLAVAQSLSRRGAQVTVFDKNYPGSGTSQISYAWVNANGKEPTSYHDLNAHAIDEHKRWQANHPASPRWLLETGTLEWAADESSLRQLAQRAAKLTTLDYPVEKRSRAALLGTMPELRLDPRVQHAWSFPSECLLYPSLFIASLLADLRTSGGQLVCNNEVTTLTESAQDVHLTLASGDEWRGDQLVLATGRWAPELISQCGLELAMTDANRADPVACSFLAQTQPLPIPLKCNLITPELNVRPDGGGRLMLQALDLDQHADPARPVSPDGLIGKEMLRRLRRLLKNTEGARIERIETGQRSRPSDGLPALGYISESARVYLMVSHSGMTLAPLLGRLVAEEMLSGTASPMLSAFAPHRLLRPLSAVAKTAPAYLPSAQ
>NZ_CP016890.1|WP_069026883.1|480903_482133_-|GTP-binding-protein
MTLSALTSDDPRLPVAVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDMSEINIDAALVRDGGAQLSRTDEKLVEMSNGCICCTLREDLLLEVKRLAQAGRFDHLVIESTGISEPLPVAETFTFEDEGGESLSAYARLDSMITVVDGFNFLRDYRSADDLQSRGESLGAQDERSVVDLLVDQIEFCDLLVLNKTDLLSPAQLHQLKSMLQALNPHALIVNSEFGQVPLDCLLNTGRFDFDRAAQAPGWLQTLRGEHLPESEEYDIRNFVYRARRPFHPQRFWHAVNHQLDNVIRSKGYFWLASRPEYAAMWSQAGAVARQGYAGRWWVSVPRTEWPQDADLLNFIAEQWQEGTGDARQELVFIGIEMDEKSVRAALDHALLTPQEMAAGPEQWITLADPVPAWFDETTA
>NZ_CP016890.1|WP_069026884.1|482253_482592_+|ASCH-domain-containing-protein
MQQLTLVPRLMPAVRSGEKTSTIRWQEGDITMGPLRLVNQQDETDAVIVWVTQVDTLRLSEVAATLGKQEEWPDAVLLEGMREHYPEIRLSSEVQLITHLTPAETLQKLTKP
>NZ_CP016890.1|WP_010246810.1|482592_483141_-|helix-turn-helix-domain-containing-protein
MNTPISIIANALVRERQRAGLSLAEVARRAGIAKSTLSQLEAGNGNPGIETLWSLCVTLNIPFSRLLEPDARRLQVIRRGEGLTVTADLADYQAVLLASCPPGVRRDIYLLEVQPGSERISQPHIPNTIEHIIIAKGRALVGPVDSAVELDVGDYITYPGDELHIFRALEADTMALLVIEHS
>NZ_CP016890.1|WP_033743923.1|483267_483921_+|AzlC-family-ABC-transporter-permease
MQLLDKGVIKAIFLVCLADGIVGLSYGSLASADGFPLWVPLALSTLVLAGASEFLFIGIVAGGGSPFTAAAAGLLVNARHLPFGIAVKDLVGQGPSGWLGCHIMNDESVVFGISQPQLAQRRSAYWLCGIGIGLIWPVSVMIGAAIGQFIPDVSVIGLDAVFPAILIALIFPALRQRRTRIPATVGALLSLLATPLVPAGMPVLFSLLGLLTWRSRK
>NZ_CP016890.1|WP_031591176.1|483917_484241_+|AzlD-domain-containing-protein
MTHQGMIIAGIALLAAGTYLMRFAGVRLGNRLPISERTQQMLSDAATILLLAVAATTTLFEGQHFAGVARVAGVGFALLLAWRRAPLIMIILGAAAMTALLRFLGAP
>NZ_CP016890.1|WP_069026885.1|484348_485251_+|alpha/beta-hydrolase
MNTVRTCFLLMLLTVITVGLTAVPAIARPDMRPLGKNIADTGSAWYRFQSKMFVSQDGERHYRVWLAIPKSDAPPGGYPMLWLLDGNAAMAHLTEPLLKKLSSGTPPVLVAVGYDTHLPFDVAARNYDYTPPNDAPDTLVTQPHGRKGGGSHQFRQLLLNRIVPWAESHAPSNPQRRALWGHSYGGLFVLDTFFHAAWFSHYFSAAPSLSWNHQRILTLARRADAGPLKHLSLYLMEGDGITERRTGHSDDLQQEERALTDILRPSGARLILSRYPGQSHGQILSSSLVDTLEIVSGTRN
>NZ_CP016890.1|WP_069026886.1|485307_486000_+|DJ-1/PfpI-family-protein
MNRPLQIGLLLFPDVTQLDLTGPWEVFARTPGIECHLIWKDRHPVRSDRGLAILPTTTFADCPPLDVICVPGGPGQIALMSDDVTLNFLRQQADQAKCVTSVCTGSLVLGAAGLLKGYRATSHSSSIDQLALLGAEPVSQRVVRDRNRISGAGVTSGIDFALTLVAEIAGDAVAKAVQLQMEYDPEPPFTSGSPHTAPPQEVEQARAKMAEFLATRRAATERAALRLQAD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016890_1	1.1\|476136\|29\|NZ_CP016890\|CRISPRCasFinder	476136-476164	29	NZ_CP046723	Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence	519991-520019	0	1.0
NZ_CP016890_1	1.1\|476136\|29\|NZ_CP016890\|CRISPRCasFinder	476136-476164	29	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	476136-476164	0	1.0
NZ_CP016890_1	1.1\|476136\|29\|NZ_CP016890\|CRISPRCasFinder	476136-476164	29	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	175608-175636	0	1.0
NZ_CP016890_1	1.1\|476136\|29\|NZ_CP016890\|CRISPRCasFinder	476136-476164	29	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	18128-18156	0	1.0
NZ_CP016890_2	2.1\|476287\|56\|NZ_CP016890\|CRISPRCasFinder	476287-476342	56	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	476287-476342	0	1.0
NZ_CP016890_3	3.1\|476536\|47\|NZ_CP016890\|CRISPRCasFinder	476536-476582	47	NZ_CP046723	Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence	520391-520437	0	1.0
NZ_CP016890_3	3.1\|476536\|47\|NZ_CP016890\|CRISPRCasFinder	476536-476582	47	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	476536-476582	0	1.0
NZ_CP016890_3	3.1\|476536\|47\|NZ_CP016890\|CRISPRCasFinder	476536-476582	47	NZ_CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	539186-539232	0	1.0
NZ_CP016890_2	2.1\|476287\|56\|NZ_CP016890\|CRISPRCasFinder	476287-476342	56	NZ_CP046723	Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence	520142-520197	1	0.982
NZ_CP016890_2	2.1\|476287\|56\|NZ_CP016890\|CRISPRCasFinder	476287-476342	56	NZ_CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	538937-538992	1	0.982
NZ_CP016890_3	3.1\|476536\|47\|NZ_CP016890\|CRISPRCasFinder	476536-476582	47	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	17710-17756	1	0.979
NZ_CP016890_3	3.1\|476536\|47\|NZ_CP016890\|CRISPRCasFinder	476536-476582	47	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	176008-176054	1	0.979
NZ_CP016890_1	1.1\|476136\|29\|NZ_CP016890\|CRISPRCasFinder	476136-476164	29	NZ_CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	538786-538814	2	0.931
NZ_CP016890_1	1.1\|476136\|29\|NZ_CP016890\|CRISPRCasFinder	476136-476164	29	NZ_CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	1636-1664	2	0.931
NZ_CP016890_2	2.1\|476287\|56\|NZ_CP016890\|CRISPRCasFinder	476287-476342	56	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	175759-175814	2	0.964
NZ_CP016890_2	2.1\|476287\|56\|NZ_CP016890\|CRISPRCasFinder	476287-476342	56	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	17950-18005	2	0.964
NZ_CP016890_2	2.1\|476287\|56\|NZ_CP016890\|CRISPRCasFinder	476287-476342	56	NZ_CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	1458-1513	2	0.964

1. spacer 1.1|476136|29|NZ_CP016890|CRISPRCasFinder matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcacgatgccttcaggtacaccgcagca	CRISPR spacer
tgcacgatgccttcaggtacaccgcagca	Protospacer
*****************************

2. spacer 1.1|476136|29|NZ_CP016890|CRISPRCasFinder matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcacgatgccttcaggtacaccgcagca	CRISPR spacer
tgcacgatgccttcaggtacaccgcagca	Protospacer
*****************************

3. spacer 1.1|476136|29|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcacgatgccttcaggtacaccgcagca	CRISPR spacer
tgcacgatgccttcaggtacaccgcagca	Protospacer
*****************************

4. spacer 1.1|476136|29|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcacgatgccttcaggtacaccgcagca	CRISPR spacer
tgcacgatgccttcaggtacaccgcagca	Protospacer
*****************************

5. spacer 2.1|476287|56|NZ_CP016890|CRISPRCasFinder matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attcggaaagccgttaaagagattcaatggtgaggcgagggtagtgcccatcagca	CRISPR spacer
attcggaaagccgttaaagagattcaatggtgaggcgagggtagtgcccatcagca	Protospacer
********************************************************

6. spacer 3.1|476536|47|NZ_CP016890|CRISPRCasFinder matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 0, identity: 1.0

aggattcactgtaatcagcagagagaggcttagccaaccgaagtcag	CRISPR spacer
aggattcactgtaatcagcagagagaggcttagccaaccgaagtcag	Protospacer
***********************************************

7. spacer 3.1|476536|47|NZ_CP016890|CRISPRCasFinder matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aggattcactgtaatcagcagagagaggcttagccaaccgaagtcag	CRISPR spacer
aggattcactgtaatcagcagagagaggcttagccaaccgaagtcag	Protospacer
***********************************************

8. spacer 3.1|476536|47|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 0, identity: 1.0

aggattcactgtaatcagcagagagaggcttagccaaccgaagtcag	CRISPR spacer
aggattcactgtaatcagcagagagaggcttagccaaccgaagtcag	Protospacer
***********************************************

9. spacer 2.1|476287|56|NZ_CP016890|CRISPRCasFinder matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 1, identity: 0.982

attcggaaagccgttaaagagattcaatggtgaggcgagggtagtgcccatcagca	CRISPR spacer
attcggaaagccgtttaagagattcaatggtgaggcgagggtagtgcccatcagca	Protospacer
*************** ****************************************

10. spacer 2.1|476287|56|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 1, identity: 0.982

attcggaaagccgttaaagagattcaatggtgaggcgagggtagtgcccatcagca	CRISPR spacer
attcggaaagccgttaaagagattcaatggtgaggcgagggtagcgcccatcagca	Protospacer
********************************************.***********

11. spacer 3.1|476536|47|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 1, identity: 0.979

aggattcactgtaatcagcagagagaggcttagccaaccgaagtcag	CRISPR spacer
aggattcactgtaatcagcagagaaaggcttagccaaccgaagtcag	Protospacer
************************.**********************

12. spacer 3.1|476536|47|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 1, identity: 0.979

aggattcactgtaatcagcagagagaggcttagccaaccgaagtcag	CRISPR spacer
aggattcactgtaatcagcagagaaaggcttagccaaccgaagtcag	Protospacer
************************.**********************

13. spacer 1.1|476136|29|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 2, identity: 0.931

tgcacgatgccttcaggtacaccgcagca	CRISPR spacer
tgcaccataccttcaggtacaccgcagca	Protospacer
***** **.********************

14. spacer 1.1|476136|29|NZ_CP016890|CRISPRCasFinder matches to NZ_CP031650 (Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.931

tgcacgatgccttcaggtacaccgcagca	CRISPR spacer
tgcacgatgccttgcggtacaccgcagca	Protospacer
*************  **************

15. spacer 2.1|476287|56|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 2, identity: 0.964

attcggaaagccgttaaagagattcaatggtgaggcgagggtagtgcccatcagca	CRISPR spacer
attcggaaagccgtttaagagattcaatggtgaggcgagggtagtgcccatcggca	Protospacer
*************** ************************************.***

16. spacer 2.1|476287|56|NZ_CP016890|CRISPRCasFinder matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 2, identity: 0.964

attcggaaagccgttaaagagattcaatggtgaggcgagggtagtgcccatcagca	CRISPR spacer
attcggaaagccgtttaagagattcaatggtgaggcgagggtagtgcccatcggca	Protospacer
*************** ************************************.***

17. spacer 2.1|476287|56|NZ_CP016890|CRISPRCasFinder matches to NZ_CP031650 (Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.964

attcggaaagccgttaaagagattcaatggtgaggcgagggtagtgcccatcagca	CRISPR spacer
attcggaaagccgttaaagagattcaatggtgaggcaaggatagtgcccatcagca	Protospacer
************************************.***.***************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016889

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP016891

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP016890

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection