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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP013460 Burkholderia stagnalis strain MSMB735WGS chromosome 3, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP013461 Burkholderia stagnalis strain MSMB735WGS chromosome 2, complete sequence 1 crisprs c2c9_V-U4,cas3,csa3,cas14j,Cas14u_CAS-V,DinG,PD-DExK 0 0 0 0
NZ_CP013459 Burkholderia stagnalis strain MSMB735WGS chromosome 1, complete sequence 4 crisprs WYL,cas3,Cas14u_CAS-V,RT,DEDDh,csa3,cas14j,DinG 1 2 5 0

Results visualization

1. NZ_CP013461
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013461_1 2250185-2250280 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP013459
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013459_1 1295465-1295595 TypeV NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013459_2 1726553-1726775 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013459_3 2259902-2259976 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP013459_4 3163714-3163812 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP013459_2 2.1|1726614|20|NZ_CP013459|PILER-CR 1726614-1726633 20 NZ_CP013459.1 1726452-1726471 0 1.0
NZ_CP013459_2 2.1|1726614|20|NZ_CP013459|PILER-CR 1726614-1726633 20 NZ_CP013459.1 1726851-1726870 0 1.0
NZ_CP013459_2 2.1|1726614|20|NZ_CP013459|PILER-CR 1726614-1726633 20 NZ_CP013459.1 365360-365379 2 0.9
NZ_CP013459_2 2.1|1726614|20|NZ_CP013459|PILER-CR 1726614-1726633 20 NZ_CP013459.1 1069803-1069822 2 0.9
NZ_CP013459_2 2.1|1726614|20|NZ_CP013459|PILER-CR 1726614-1726633 20 NZ_CP013461.1 455672-455691 2 0.9
NZ_CP013459_2 2.1|1726614|20|NZ_CP013459|PILER-CR 1726614-1726633 20 NZ_CP013461.1 1563236-1563255 2 0.9

1. spacer 2.1|1726614|20|NZ_CP013459|PILER-CR matches to position: 1726452-1726471, mismatch: 0, identity: 1.0

gcccgtcgcaccgccgagcg	CRISPR spacer
gcccgtcgcaccgccgagcg	Protospacer
********************

2. spacer 2.1|1726614|20|NZ_CP013459|PILER-CR matches to position: 1726851-1726870, mismatch: 0, identity: 1.0

gcccgtcgcaccgccgagcg	CRISPR spacer
gcccgtcgcaccgccgagcg	Protospacer
********************

3. spacer 2.1|1726614|20|NZ_CP013459|PILER-CR matches to position: 365360-365379, mismatch: 2, identity: 0.9

gcccgtcgcaccgccgagcg	CRISPR spacer
gcccgtcgcgccgccgtgcg	Protospacer
*********.****** ***

4. spacer 2.1|1726614|20|NZ_CP013459|PILER-CR matches to position: 1069803-1069822, mismatch: 2, identity: 0.9

gcccgtcgcaccgccgagcg	CRISPR spacer
gcccgtcgccgcgccgagcg	Protospacer
*********  *********

5. spacer 2.1|1726614|20|NZ_CP013459|PILER-CR matches to position: 455672-455691, mismatch: 2, identity: 0.9

gcccgtcgcaccgccgagcg	CRISPR spacer
gcccgttgcgccgccgagcg	Protospacer
******.**.**********

6. spacer 2.1|1726614|20|NZ_CP013459|PILER-CR matches to position: 1563236-1563255, mismatch: 2, identity: 0.9

gcccgtcgcaccgccgagcg	CRISPR spacer
gcccggcgcatcgccgagcg	Protospacer
***** ****.*********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP024309 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence 303610-303632 1 0.957
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NC_000914 Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence 169841-169863 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_LR134454 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence 227110-227132 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP040819 Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence 244294-244316 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP040819 Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence 573642-573664 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP029357 Azospirillum sp. CFH 70021 plasmid unnamed2 480345-480367 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_AP014579 Burkholderia sp. RPE67 plasmid p1, complete sequence 868415-868437 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP006373 Aureimonas sp. AU20 plasmid pAU20f, complete sequence 13040-13062 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_AP022319 Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence 988385-988407 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NC_014157 Salinibacter ruber M8 plasmid pSR84, complete sequence 43078-43100 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NC_015314 Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence 18490-18512 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 280698-280720 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP042999 Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence 16458-16480 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 214671-214693 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP023071 Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence 1892687-1892709 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP014598 Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence 178826-178848 2 0.913
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_AP022319 Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence 148991-149013 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP032686 Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence 303083-303105 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP032687 Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence 366443-366465 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP032691 Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence 298062-298084 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP013632 Rhizobium sp. N324 plasmid pRspN324b, complete sequence 379641-379663 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP020948 Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence 184826-184848 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 621503-621525 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 4464380-4464402 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP022194 Yangia pacifica strain YSBP01 plasmid unnamed4, complete sequence 926-948 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NC_020061 Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence 353315-353337 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 NZ_CP035002 Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence 260163-260185 3 0.87
NZ_CP013459_2 2.2|1726695|23|NZ_CP013459|PILER-CR 1726695-1726717 23 LN889993 Bacteriophage 4A genome assembly, chromosome: 1 46978-47000 3 0.87
NZ_CP013459_3 3.1|2259927|25|NZ_CP013459|CRISPRCasFinder 2259927-2259951 25 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 865558-865582 4 0.84
NZ_CP013459_3 3.1|2259927|25|NZ_CP013459|CRISPRCasFinder 2259927-2259951 25 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 870238-870262 4 0.84

1. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP024309 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence) position: , mismatch: 1, identity: 0.957

accgcccgtcgcgccgccgagcg	CRISPR spacer
accgcccgacgcgccgccgagcg	Protospacer
******** **************

2. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
tccgcccgtcgcgccgccgagct	Protospacer
 ********************* 

3. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
gcggcccgtcgcgccgccgagcg	Protospacer
.* ********************

4. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
gccgcccgccgcgccgccgagcg	Protospacer
.*******.**************

5. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
accgcccggcgcgccgccgaggg	Protospacer
******** ************ *

6. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
gccgcccgccgcgccgccgagcg	Protospacer
.*******.**************

7. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
gccgcccgtctcgccgccgagcg	Protospacer
.********* ************

8. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP006373 (Aureimonas sp. AU20 plasmid pAU20f, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
atcgcccgtcgcgccgccgagca	Protospacer
*.********************.

9. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
gccgcccgtcgcgccgccgaccg	Protospacer
.******************* **

10. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NC_014157 (Salinibacter ruber M8 plasmid pSR84, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
acggcccgtcgcgccgccgagca	Protospacer
** *******************.

11. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NC_015314 (Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
atcgcccggcgcgccgccgagcg	Protospacer
*.****** **************

12. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
accgcccgtcgcgccgctgcgcg	Protospacer
*****************.* ***

13. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP042999 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_2, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
accgcccggcgcgacgccgagcg	Protospacer
******** **** *********

14. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
accgcccttcgccccgccgagcg	Protospacer
******* **** **********

15. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
accgcccgtcgcgccgctgcgcg	Protospacer
*****************.* ***

16. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP014598 (Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.913

accgcccgtcgcgccgccgagcg	CRISPR spacer
accgcccgccgcgccgccgcgcg	Protospacer
********.********** ***

17. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
ttcgcccgtcacgccgccgagcg	Protospacer
 .********.************

18. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
acctcccgtcgcgccgccgagga	Protospacer
*** ***************** .

19. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
tcggcccgtcgcgccgccgagct	Protospacer
 * ******************* 

20. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
acctcccgtcgcgccgccgagga	Protospacer
*** ***************** .

21. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP013632 (Rhizobium sp. N324 plasmid pRspN324b, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
tccgccagtcgcgccgccgagcc	Protospacer
 ***** *************** 

22. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP020948 (Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
tccgccagtcgcgccgccgagcc	Protospacer
 ***** *************** 

23. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
cgcgcccgtcacgccgccgagcg	Protospacer
  ********.************

24. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
cgcgcccgtcgcgccgtcgagcg	Protospacer
  **************.******

25. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP022194 (Yangia pacifica strain YSBP01 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
ctcgccggtcgcgccgccgagcg	Protospacer
 .**** ****************

26. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NC_020061 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
tcggcccgtcgcgccgccgagct	Protospacer
 * ******************* 

27. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
tccgccagtcgcgccgccgagcc	Protospacer
 ***** *************** 

28. spacer 2.2|1726695|23|NZ_CP013459|PILER-CR matches to LN889993 (Bacteriophage 4A genome assembly, chromosome: 1) position: , mismatch: 3, identity: 0.87

accgcccgtcgcgccgccgagcg	CRISPR spacer
gccgcccgtcgccccgccgagca	Protospacer
.*********** *********.

29. spacer 3.1|2259927|25|NZ_CP013459|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 4, identity: 0.84

gcgcttacgctgatcccatgcaaag	CRISPR spacer
gcgcttactctggtcccatgcaata	Protospacer
******** ***.********** .

30. spacer 3.1|2259927|25|NZ_CP013459|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 4, identity: 0.84

gcgcttacgctgatcccatgcaaag	CRISPR spacer
gcgcttactctggtcccatgcaata	Protospacer
******** ***.********** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 231327 : 257704 31 Burkholderia_phage(82.14%) tail,holin,integrase,tRNA,plate attL 231229:231247|attR 256642:256660
DBSCAN-SWA_2 460607 : 519964 59 uncultured_Mediterranean_phage(28.57%) bacteriocin,protease,plate NA
DBSCAN-SWA_3 826370 : 835357 7 Hokovirus(16.67%) NA NA
DBSCAN-SWA_4 1136402 : 1143829 8 Burkholderia_virus(66.67%) transposase NA
DBSCAN-SWA_5 2814637 : 2865188 63 uncultured_Caudovirales_phage(27.27%) protease,tail,capsid,holin,head,terminase,integrase,transposase,plate,portal attL 2809914:2809930|attR 2869163:2869179
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage