Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017114 Cobetia marina strain JCM 21022 chromosome, complete genome 1 crisprs WYL,DEDDh,csa3,DinG,cas3 0 4 2 0

Results visualization

1. NZ_CP017114
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017114_1 3440409-3440720 Orphan NA
6 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017114_1 1.1|3440430|24|NZ_CP017114|CRT 3440430-3440453 24 MT808983 Escherichia phage DY1, complete genome 30822-30845 2 0.917
NZ_CP017114_1 1.1|3440430|24|NZ_CP017114|CRT 3440430-3440453 24 NC_024379 Escherichia phage PE3-1, complete genome 30826-30849 2 0.917
NZ_CP017114_1 1.1|3440430|24|NZ_CP017114|CRT 3440430-3440453 24 NC_047777 Escherichia phage ZG49, complete genome 30931-30954 2 0.917
NZ_CP017114_1 1.1|3440430|24|NZ_CP017114|CRT 3440430-3440453 24 KX689784 Escherichia phage JSS1, complete genome 8986-9009 2 0.917
NZ_CP017114_1 1.6|3440676|24|NZ_CP017114|CRT 3440676-3440699 24 NC_010625 Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence 60650-60673 3 0.875
NZ_CP017114_1 1.6|3440676|24|NZ_CP017114|CRT 3440676-3440699 24 CP011998 Ralstonia solanacearum strain YC45 plasmid, complete sequence 739170-739193 3 0.875
NZ_CP017114_1 1.3|3440520|27|NZ_CP017114|CRT 3440520-3440546 27 CP003180 Sulfobacillus acidophilus DSM 10332 plasmid, complete sequence 65405-65431 5 0.815
NZ_CP017114_1 1.3|3440520|27|NZ_CP017114|CRT 3440520-3440546 27 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 250082-250108 5 0.815
NZ_CP017114_1 1.3|3440520|27|NZ_CP017114|CRT 3440520-3440546 27 NZ_CP029833 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence 515173-515199 6 0.778
NZ_CP017114_1 1.3|3440520|27|NZ_CP017114|CRT 3440520-3440546 27 NC_016587 Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence 442613-442639 6 0.778
NZ_CP017114_1 1.3|3440520|27|NZ_CP017114|CRT 3440520-3440546 27 KP708985 Klebsiella phage vB_KpnP_SU503, complete genome 13210-13236 6 0.778
NZ_CP017114_1 1.3|3440520|27|NZ_CP017114|CRT 3440520-3440546 27 MN380459 Klebsiella phage vB_KpnP_fHeKpn01, complete genome 13006-13032 6 0.778
NZ_CP017114_1 1.5|3440628|27|NZ_CP017114|CRT 3440628-3440654 27 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 355887-355913 6 0.778
NZ_CP017114_1 1.5|3440628|27|NZ_CP017114|CRT 3440628-3440654 27 NZ_CP021373 Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence 226150-226176 6 0.778
NZ_CP017114_1 1.5|3440628|27|NZ_CP017114|CRT 3440628-3440654 27 KP708985 Klebsiella phage vB_KpnP_SU503, complete genome 13210-13236 6 0.778
NZ_CP017114_1 1.5|3440628|27|NZ_CP017114|CRT 3440628-3440654 27 MN380459 Klebsiella phage vB_KpnP_fHeKpn01, complete genome 13006-13032 6 0.778
NZ_CP017114_1 1.5|3440628|27|NZ_CP017114|CRT 3440628-3440654 27 LN997843 Streptomyces reticuli genome assembly TUE45, plasmid : II 246351-246377 7 0.741

1. spacer 1.1|3440430|24|NZ_CP017114|CRT matches to MT808983 (Escherichia phage DY1, complete genome) position: , mismatch: 2, identity: 0.917

agtgcgctgactttccgaacgagc	CRISPR spacer
agttcgctgacgttccgaacgagc	Protospacer
*** ******* ************

2. spacer 1.1|3440430|24|NZ_CP017114|CRT matches to NC_024379 (Escherichia phage PE3-1, complete genome) position: , mismatch: 2, identity: 0.917

agtgcgctgactttccgaacgagc	CRISPR spacer
agttcgctgacgttccgaacgagc	Protospacer
*** ******* ************

3. spacer 1.1|3440430|24|NZ_CP017114|CRT matches to NC_047777 (Escherichia phage ZG49, complete genome) position: , mismatch: 2, identity: 0.917

agtgcgctgactttccgaacgagc	CRISPR spacer
agttcgctgacgttccgaacgagc	Protospacer
*** ******* ************

4. spacer 1.1|3440430|24|NZ_CP017114|CRT matches to KX689784 (Escherichia phage JSS1, complete genome) position: , mismatch: 2, identity: 0.917

agtgcgctgactttccgaacgagc	CRISPR spacer
agttcgctgacgttccgaacgagc	Protospacer
*** ******* ************

5. spacer 1.6|3440676|24|NZ_CP017114|CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 3, identity: 0.875

agtgcgctggccgccagtgcgctg	CRISPR spacer
cgtgcgctggtcgccagtgcgttg	Protospacer
 *********.**********.**

6. spacer 1.6|3440676|24|NZ_CP017114|CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 3, identity: 0.875

agtgcgctggccgccagtgcgctg	CRISPR spacer
tgtgcgctggccgccagtgccccg	Protospacer
 ******************* *.*

7. spacer 1.3|3440520|27|NZ_CP017114|CRT matches to CP003180 (Sulfobacillus acidophilus DSM 10332 plasmid, complete sequence) position: , mismatch: 5, identity: 0.815

attgccacggccttcaccggcaggctt	CRISPR spacer
atttccacggccttcaccggcggggga	Protospacer
*** *****************.**   

8. spacer 1.3|3440520|27|NZ_CP017114|CRT matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.815

attgccacggccttcaccggcaggctt	CRISPR spacer
acctccacggtcttcaccggcaagctt	Protospacer
*.. ******.***********.****

9. spacer 1.3|3440520|27|NZ_CP017114|CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.778

attgccacggccttcaccggcaggctt	CRISPR spacer
gcggcgatggccttcaccggcaggctg	Protospacer
.. ** *.****************** 

10. spacer 1.3|3440520|27|NZ_CP017114|CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 6, identity: 0.778

attgccacggccttcaccggcaggctt	CRISPR spacer
gcggcgatggccttcaccggcaggctg	Protospacer
.. ** *.****************** 

11. spacer 1.3|3440520|27|NZ_CP017114|CRT matches to KP708985 (Klebsiella phage vB_KpnP_SU503, complete genome) position: , mismatch: 6, identity: 0.778

attgccacggccttcaccggcaggctt	CRISPR spacer
aggtccacgtccttcaccggcaggccg	Protospacer
*   ***** ***************. 

12. spacer 1.3|3440520|27|NZ_CP017114|CRT matches to MN380459 (Klebsiella phage vB_KpnP_fHeKpn01, complete genome) position: , mismatch: 6, identity: 0.778

attgccacggccttcaccggcaggctt	CRISPR spacer
aggtccacgtccttcaccggcaggccg	Protospacer
*   ***** ***************. 

13. spacer 1.5|3440628|27|NZ_CP017114|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.778

attgccacgaccttcaccggcaggctt	CRISPR spacer
aacaccacgaccttcaccggcagcttc	Protospacer
* ..******************* .*.

14. spacer 1.5|3440628|27|NZ_CP017114|CRT matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 6, identity: 0.778

attgccacgaccttcaccggcaggctt	CRISPR spacer
gcatccaccaccttcaccggcagggtt	Protospacer
..  **** *************** **

15. spacer 1.5|3440628|27|NZ_CP017114|CRT matches to KP708985 (Klebsiella phage vB_KpnP_SU503, complete genome) position: , mismatch: 6, identity: 0.778

attgccacgaccttcaccggcaggctt	CRISPR spacer
aggtccacgtccttcaccggcaggccg	Protospacer
*   ***** ***************. 

16. spacer 1.5|3440628|27|NZ_CP017114|CRT matches to MN380459 (Klebsiella phage vB_KpnP_fHeKpn01, complete genome) position: , mismatch: 6, identity: 0.778

attgccacgaccttcaccggcaggctt	CRISPR spacer
aggtccacgtccttcaccggcaggccg	Protospacer
*   ***** ***************. 

17. spacer 1.5|3440628|27|NZ_CP017114|CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 7, identity: 0.741

attgccacgaccttcaccggcaggctt	CRISPR spacer
tccgccacgaccgtcaccggcaggtgc	Protospacer
 ..********* ***********. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1304454 : 1341438 46 Pseudomonas_phage(18.18%) protease,holin,capsid,portal,integrase,head,tail,terminase attL 1304273:1304293|attR 1344103:1344123
DBSCAN-SWA_2 3395240 : 3403576 8 Acinetobacter_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage