CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017031	Campylobacter jejuni subsp. jejuni strain MTVDSCj07 chromosome, complete genome	2 crisprs	DEDDh,WYL,cas14j,cas2,cas1	0	13	1	0

1. NZ_CP017031

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017031_1

• CRISPR_ID: NZ_CP017031_1
• CRISPR_location: 1342452-1342531
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP017031_1

Consensus_repeat	Method
TCTTTTTGTTCTTTTAAAGCTTC	CRISPRCasFinder

spacers of NZ_CP017031_1

>1.1|1342475|34|NZ_CP017031|CRISPRCasFinder
TTTTTTAGCTTTATACTCAGCCTTACTCATATAA

CRISPR arrays and Neighbor proteins around NZ_CP017031_1

CRISPR arrays

The CRISPR arrays of NZ_CP017031_1

>merge|NZ_CP017031|1|1342452-1342531|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTCTTTTTTAGCTTTATACTCAGCCTTACTCATATAATCTTTTTGTTCTTTTAAAGCATC

>NZ_CP017031|1|1|1342452-1342531|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTC	TTTTTTAGCTTTATACTCAGCCTTACTCATATAA
TCTTTTTGTTCTTTTAAAGCATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017031.1|WP_002779147.1|1334265_1334490_+|ferrous-iron-transport-protein-A	unknown	unknown	gnl|CDD|224830
NZ_CP017031.1|WP_002855339.1|1342051_1342378_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|223870
NZ_CP017031.1|WP_002903876.1|1336222_1337716_-|hydrogenase-small-subunit	unknown	unknown	gnl|CDD|224654
NZ_CP017031.1|WP_002903881.1|1349358_1351428_-|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|226093
NZ_CP017031.1|WP_002825806.1|1344861_1345209_+|holo-ACP-synthase	unknown	unknown	gnl|CDD|223807
NZ_CP017031.1|WP_002890768.1|1348177_1349362_-|capsule-polysaccharide-modification-protein-KpsS	unknown	unknown	gnl|CDD|226092
NZ_CP017031.1|WP_002855518.1|1345209_1345629_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP017031.1|WP_002855324.1|1339215_1340418_-|phosphoglycerate-kinase	unknown	unknown	gnl|CDD|234613
NZ_CP017031.1|WP_002875234.1|1351926_1352688_-|CTP:phosphoglutamine-cytidylyltransferase	unknown	unknown	gnl|CDD|224134
NZ_CP017031.1|WP_002780456.1|1337719_1338544_-|enoyl-ACP-reductase-FabI	unknown	unknown	gnl|CDD|181416
NZ_CP017031.1|WP_002855470.1|1341478_1342024_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl|CDD|223985
NZ_CP017031.1|WP_002890766.1|1346983_1348105_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP017031.1|WP_069358681.1|1334486_1336226_+|ferrous-iron-transport-protein-B	unknown	unknown	gnl|CDD|223447
NZ_CP017031.1|WP_002855528.1|1338547_1339219_-|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NZ_CP017031.1|WP_002890764.1|1345625_1346987_-|cytochrome-P450	unknown	unknown	gnl|CDD|225035
NZ_CP017031.1|WP_002780453.1|1340420_1341419_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223135
NZ_CP017031.1|WP_002818256.1|1351424_1351937_-|adenylyl-sulfate-kinase	unknown	unknown	gnl|CDD|235498
NZ_CP017031.1|WP_002857989.1|1331469_1332837_+|adenylosuccinate-lyase	unknown	unknown	gnl|CDD|176469
NZ_CP017031.1|WP_002852383.1|1342833_1344204_-|phosphoglucosamine-mutase-PgmL	unknown	unknown	gnl|CDD|100091
NZ_CP017031.1|WP_002855429.1|1344325_1344862_+|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl|CDD|181433

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP017031.1|WP_002779147.1|1334265_1334490_+|ferrous-iron-transport-protein-A	gnl|CDD|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.69416e-22
NZ_CP017031.1|WP_002855339.1|1342051_1342378_+|ribosome-silencing-factor	gnl|CDD|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	8.97235e-38
NZ_CP017031.1|WP_002903876.1|1336222_1337716_-|hydrogenase-small-subunit	gnl|CDD|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	4.03495e-157
NZ_CP017031.1|WP_002903881.1|1349358_1351428_-|capsular-polysaccharide-biosynthesis-protein	gnl|CDD|226093	COG3563, KpsC, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP017031.1|WP_002825806.1|1344861_1345209_+|holo-ACP-synthase	gnl|CDD|223807	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism].	3.71491e-40
NZ_CP017031.1|WP_002890768.1|1348177_1349362_-|capsule-polysaccharide-modification-protein-KpsS	gnl|CDD|226092	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP017031.1|WP_002855324.1|1339215_1340418_-|phosphoglycerate-kinase	gnl|CDD|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP017031.1|WP_002875234.1|1351926_1352688_-|CTP:phosphoglutamine-cytidylyltransferase	gnl|CDD|224134	COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane].	5.48264e-74
NZ_CP017031.1|WP_002780456.1|1337719_1338544_-|enoyl-ACP-reductase-FabI	gnl|CDD|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP017031.1|WP_002855470.1|1341478_1342024_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl|CDD|223985	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].	3.16494e-57
NZ_CP017031.1|WP_069358681.1|1334486_1336226_+|ferrous-iron-transport-protein-B	gnl|CDD|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP017031.1|WP_002855528.1|1338547_1339219_-|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.79646e-86
NZ_CP017031.1|WP_002890764.1|1345625_1346987_-|cytochrome-P450	gnl|CDD|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.49806e-79
NZ_CP017031.1|WP_002780453.1|1340420_1341419_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	2.96117e-168
NZ_CP017031.1|WP_002818256.1|1351424_1351937_-|adenylyl-sulfate-kinase	gnl|CDD|235498	PRK05541, PRK05541, adenylylsulfate kinase; Provisional.	1.09566e-100
NZ_CP017031.1|WP_002857989.1|1331469_1332837_+|adenylosuccinate-lyase	gnl|CDD|176469	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.	0
NZ_CP017031.1|WP_002852383.1|1342833_1344204_-|phosphoglucosamine-mutase-PgmL	gnl|CDD|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP017031.1|WP_002855429.1|1344325_1344862_+|flagellar-basal-body-associated-protein-FliL	gnl|CDD|181433	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.19231e-91

Protein sequences

>NZ_CP017031.1|WP_002855339.1|1342051_1342378_+|ribosome-silencing-factor
MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKGRV
>NZ_CP017031.1|WP_002855470.1|1341478_1342024_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKIALFGGSFDPPHNGHNSVILEALEKLDIDKLIIMPTYINPFKQNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNTNEVCEEIKDEVKKYYEKLQKN
>NZ_CP017031.1|WP_002780453.1|1340420_1341419_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDDERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA
>NZ_CP017031.1|WP_002855324.1|1339215_1340418_-|phosphoglycerate-kinase
MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKENE
>NZ_CP017031.1|WP_002855528.1|1338547_1339219_-|triose-phosphate-isomerase
MIFAANLKCNHTRASFKIYAKILNKTMGVKCDDIIVFPPSIAFLENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGVSAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFIKLIKG
>NZ_CP017031.1|WP_002780456.1|1337719_1338544_-|enoyl-ACP-reductase-FabI
MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG
>NZ_CP017031.1|WP_002903876.1|1336222_1337716_-|hydrogenase-small-subunit
MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLSLGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKGPYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYTFIEQNFDENPMPSKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAEKPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKTFGDNITKISSLKAS
>NZ_CP017031.1|WP_069358681.1|1334486_1336226_+|ferrous-iron-transport-protein-B
MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKTFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKIIILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNTLGEFVKNNISNTFIASALADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFQPLELDWKLSVSLISGLAAKEVMISTMGVLYSLGKDVDETKVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN
>NZ_CP017031.1|WP_002779147.1|1334265_1334490_+|ferrous-iron-transport-protein-A
MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSLKNATIMVELDTSCVILRSDEAKTIEVNLI
>NZ_CP017031.1|WP_002857989.1|1331469_1332837_+|adenylosuccinate-lyase
MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKAQAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEYVHFRVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQALPITFGHKVAIWLSELDRHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLENLGLEVPNISWQSTRDRFIELGFVLGNINATFNKIAHQLLILSHNEIDEVAEPFGKGQVGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMFLMLSVVLANMKFALSDLEVKKDKMLKNLDTLKGFVLAERVMFALSDHYGKQHAHEIVYENAMLGIEQQKTFKEVLLADTRVSQVLKEKDIDALLDATSYVGYAPKLVDEFLAKIKNSAILK
>NZ_CP017031.1|WP_002852383.1|1342833_1344204_-|phosphoglucosamine-mutase-PgmL
MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILSLYVKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAKPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTYVFCGDELCYLFAKNIPNPRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEIKARLKN
>NZ_CP017031.1|WP_002855429.1|1344325_1344862_+|flagellar-basal-body-associated-protein-FliL
MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDFVVS
>NZ_CP017031.1|WP_002825806.1|1344861_1345209_+|holo-ACP-synthase
MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAGLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSISHDNGFAIAIVAIV
>NZ_CP017031.1|WP_002855518.1|1345209_1345629_-|hypothetical-protein
MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGYLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKITDFFQKDHCKRANKREQPVVDFIISRNLDKQTIGK
>NZ_CP017031.1|WP_002890764.1|1345625_1346987_-|cytochrome-P450
MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVKMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMSSKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQVLSDIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKRKL
>NZ_CP017031.1|WP_002890766.1|1346983_1348105_-|hypothetical-protein
MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKVDLSKIEKNEQFPFFQISCEGVQTTYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKFGKESIYQLITGYYPFFYVLFSLLFSLVVAFGSFAFLQNYMHFSLAIIIGCFLGFLLNHFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQERIKLFANTIVDKLKQNENKQDYELVLVAHSVGTIVCIEVLECILRQNLDLSLLHKLKILTLGECIPLVSYQKKADEFRKKLEFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI
>NZ_CP017031.1|WP_002890768.1|1348177_1349362_-|capsule-polysaccharide-modification-protein-KpsS
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHTKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK
>NZ_CP017031.1|WP_002903881.1|1349358_1351428_-|capsular-polysaccharide-biosynthesis-protein
MKHYSISKKLIANVRNFYTISLYKKNSKINKDDLFLGWGRKKSGLKAINLAKKYKAKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDATAPSKLENLLNTYEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDASLEFGLAKGFKTVDMIKDAIKENPKSKIYIKIHPDVLSGKKQSDLDINSLPKECILITENFNPVALLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKRSLEEVFYVAYILYAEYFNPYLNQKSNIFDTIQTLAKYKDIEKANSNRLFFFGFSKWKRKFVKPFFIAKNNEIIFLDFLDCLKNIQLKENDKFFIWGKRIDYNALKTTLIKKAQDENLLHFTPKISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKASKLEELLQNEIFDENMLNRAKNIIKILLENRFSKYNGLKHEDLKINVKTGQKIILIPAQVEDDASMILGGFGLSTLDLLKEVRSKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSAIKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRTRKLSLEELVAGALIAYPRYINPKTKTLCEIEVCLDIMLNLQKAYFSKKYIKLAIDFKTFMLRKIRRFYEFLAKK
>NZ_CP017031.1|WP_002818256.1|1351424_1351937_-|adenylyl-sulfate-kinase
MINSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDELREILGHYAYDRQGRIDMALKRAKFAKFLNDQGMMVIVTTISMFNEIYDYNRKQLKNYYEIYIECDMHELIQRDQKGLYTKALNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEKVELIIKKLAL
>NZ_CP017031.1|WP_002875234.1|1351926_1352688_-|CTP:phosphoglutamine-cytidylyltransferase
MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSAGINEIAVVGGYLNEVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFILKCIEEKQDLIISYADIVYFQDCVQKLINAKEELAIVVDKSWRKLWSKRFANPLEDAETLKMTNGYIIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYGMLDRDILYDNKNFENMYMTSFLQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIDK

Crispr_ID: NZ_CP017031_2

• CRISPR_ID: NZ_CP017031_2
• CRISPR_location: 1466230-1466595
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 5 spacers
• Cas_protein_info: cas2,cas1

Consensus repeat of NZ_CP017031_2

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder

spacers of NZ_CP017031_2

>2.1|1466266|30|NZ_CP017031|CRT
ATAATTTCTAATTTCATTTATAACCTTTCA
>2.2|1466332|30|NZ_CP017031|CRT
TAGTAGCTAAGAATAAAATAAGAAACACTG
>2.3|1466398|30|NZ_CP017031|CRT
GTTGGAATGCTTAAGCAGGGGTGGAGTGAA
>2.4|1466464|30|NZ_CP017031|CRT
GTTAAAAGGATTTTGCTTTGCGATTGGGAA
>2.5|1466530|30|NZ_CP017031|CRT
ATTTAATAAGTGGTATTGTTGAAATTAAGA
>2.6|1466267|30|NZ_CP017031|PILER-CR
ATAATTTCTAATTTCATTTATAACCTTTCA
>2.7|1466333|30|NZ_CP017031|PILER-CR
TAGTAGCTAAGAATAAAATAAGAAACACTG
>2.8|1466399|30|NZ_CP017031|PILER-CR
GTTGGAATGCTTAAGCAGGGGTGGAGTGAA
>2.9|1466465|30|NZ_CP017031|PILER-CR
GTTAAAAGGATTTTGCTTTGCGATTGGGAA
>2.10|1466531|30|NZ_CP017031|PILER-CR
ATTTAATAAGTGGTATTGTTGAAATTAAGA
>2.11|1466266|31|NZ_CP017031|CRISPRCasFinder
ATAATTTCTAATTTCATTTATAACCTTTCAG
>2.12|1466332|31|NZ_CP017031|CRISPRCasFinder
TAGTAGCTAAGAATAAAATAAGAAACACTGG
>2.13|1466398|31|NZ_CP017031|CRISPRCasFinder
GTTGGAATGCTTAAGCAGGGGTGGAGTGAAG
>2.14|1466464|31|NZ_CP017031|CRISPRCasFinder
GTTAAAAGGATTTTGCTTTGCGATTGGGAAG
>2.15|1466530|31|NZ_CP017031|CRISPRCasFinder
ATTTAATAAGTGGTATTGTTGAAATTAAGAG

CRISPR arrays and Neighbor proteins around NZ_CP017031_2

CRISPR arrays

The CRISPR arrays of NZ_CP017031_2

>merge|NZ_CP017031|2|1466230-1466595|CRT,PILER-CR,CRISPRCasFinder
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATATAATTTCTAATTTCATTTATAACCTTTCAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTAGTAGCTAAGAATAAAATAAGAAACACTGGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGTTGGAATGCTTAAGCAGGGGTGGAGTGAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGTTAAAAGGATTTTGCTTTGCGATTGGGAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATATTTAATAAGTGGTATTGTTGAAATTAAGAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP017031|2|1|1466230-1466595|CRT
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	ATAATTTCTAATTTCATTTATAACCTTTCA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TAGTAGCTAAGAATAAAATAAGAAACACTG
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTGGAATGCTTAAGCAGGGGTGGAGTGAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTAAAAGGATTTTGCTTTGCGATTGGGAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	ATTTAATAAGTGGTATTGTTGAAATTAAGA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP017031|2|1|1466231-1466595|PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA	TAATTTCTAATTTCATTTATAACCTTTCAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	AGTAGCTAAGAATAAAATAAGAAACACTGG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATG	TTGGAATGCTTAAGCAGGGGTGGAGTGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATG	TTAAAAGGATTTTGCTTTGCGATTGGGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA	TTTAATAAGTGGTATTGTTGAAATTAAGAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP017031|2|2|1466231-1466595|CRISPRCasFinder
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	ATAATTTCTAATTTCATTTATAACCTTTCAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TAGTAGCTAAGAATAAAATAAGAAACACTGG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTGGAATGCTTAAGCAGGGGTGGAGTGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GTTAAAAGGATTTTGCTTTGCGATTGGGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	ATTTAATAAGTGGTATTGTTGAAATTAAGAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017031.1|WP_002876343.1|1471220_1471403_+|hypothetical-protein	unknown	unknown	gnl|CDD|182621
NZ_CP017031.1|WP_002779488.1|1464247_1464469_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|224888
NZ_CP017031.1|WP_002851546.1|1476901_1477351_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NZ_CP017031.1|WP_002876346.1|1472695_1473685_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439
NZ_CP017031.1|WP_002851407.1|1475071_1475803_+|glucosaminidase-domain-containing-protein	unknown	unknown	gnl|CDD|225539
NZ_CP017031.1|WP_002851537.1|1460249_1460441_-|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl|CDD|236534
NZ_CP017031.1|WP_002855462.1|1477480_1478701_-|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|235168
NZ_CP017031.1|WP_002851155.1|1475799_1476837_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NZ_CP017031.1|WP_002890120.1|1473745_1474351_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NZ_CP017031.1|WP_171823035.1|1466739_1467153_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP017031.1|WP_002858151.1|1464919_1466110_+|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl|CDD|223380
NZ_CP017031.1|WP_002868028.1|1462704_1464246_+|multicopper-oxidase-CueO	unknown	unknown	gnl|CDD|225043
NZ_CP017031.1|WP_002858431.1|1461432_1462581_-|carboxynorspermidine-decarboxylase	unknown	unknown	gnl|CDD|273414
NZ_CP017031.1|WP_079005335.1|1460415_1461129_-|molecular-chaperone-TorD-family-protein	unknown	unknown	gnl|CDD|225916
NZ_CP017031.1|WP_010891941.1|1457445_1460250_-|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl|CDD|239153
NZ_CP017031.1|WP_002851174.1|1455878_1456811_-|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl|CDD|130645
NZ_CP017031.1|WP_002819068.1|1467163_1468054_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NZ_CP017031.1|WP_002781229.1|1464469_1464916_+|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|223391
NZ_CP017031.1|WP_002876348.1|1474347_1475097_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NZ_CP017031.1|WP_002851264.1|1456807_1457449_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319893

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP017031.1|WP_002819068.1|1467163_1468054_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	1.6e-98	323.9	9.5
NZ_CP017031.1|WP_171823035.1|1466739_1467153_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	6.3e-55	179.1	0.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP017031.1|WP_002876343.1|1471220_1471403_+|hypothetical-protein	gnl|CDD|182621	PRK10654, dcuC, C4-dicarboxylate transporter DcuC; Provisional.	0.000391506
NZ_CP017031.1|WP_002779488.1|1464247_1464469_+|MoaD/ThiS-family-protein	gnl|CDD|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	1.67964e-11
NZ_CP017031.1|WP_002851546.1|1476901_1477351_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NZ_CP017031.1|WP_002876346.1|1472695_1473685_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP017031.1|WP_002851407.1|1475071_1475803_+|glucosaminidase-domain-containing-protein	gnl|CDD|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	2.12305e-102
NZ_CP017031.1|WP_002851537.1|1460249_1460441_-|twin-arginine-translocation-signal-domain-containing-protein	gnl|CDD|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NZ_CP017031.1|WP_002855462.1|1477480_1478701_-|glucose-6-phosphate-isomerase	gnl|CDD|235168	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP017031.1|WP_002851155.1|1475799_1476837_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.54942e-34
NZ_CP017031.1|WP_002890120.1|1473745_1474351_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	3.96096e-68
NZ_CP017031.1|WP_171823035.1|1466739_1467153_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.7568e-55
NZ_CP017031.1|WP_002858151.1|1464919_1466110_+|molybdopterin-molybdotransferase-MoeA	gnl|CDD|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	2.37307e-143
NZ_CP017031.1|WP_002868028.1|1462704_1464246_+|multicopper-oxidase-CueO	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.19169e-120
NZ_CP017031.1|WP_002858431.1|1461432_1462581_-|carboxynorspermidine-decarboxylase	gnl|CDD|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP017031.1|WP_079005335.1|1460415_1461129_-|molecular-chaperone-TorD-family-protein	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000778983
NZ_CP017031.1|WP_010891941.1|1457445_1460250_-|formate-dehydrogenase-subunit-alpha	gnl|CDD|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP017031.1|WP_002851174.1|1455878_1456811_-|formate-dehydrogenase-subunit-gamma	gnl|CDD|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.78832e-90
NZ_CP017031.1|WP_002819068.1|1467163_1468054_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.92431e-121
NZ_CP017031.1|WP_002781229.1|1464469_1464916_+|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	1.4187e-43
NZ_CP017031.1|WP_002876348.1|1474347_1475097_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	1.04959e-92
NZ_CP017031.1|WP_002851264.1|1456807_1457449_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57

Protein sequences

>NZ_CP017031.1|WP_002858151.1|1464919_1466110_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENIRIENNTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYTREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDIIFMP
>NZ_CP017031.1|WP_002781229.1|1464469_1464916_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGGIEALSFDIYESLLKKWFDEWQKRVDFDGISLLFAHSIGDVAIHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NZ_CP017031.1|WP_002779488.1|1464247_1464469_+|MoaD/ThiS-family-protein
MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKDGDKIALLPPVCGG
>NZ_CP017031.1|WP_002868028.1|1462704_1464246_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEESNTLFLASISLKKEKLELPKNLKIFKPLEEPKEFKEIIMSEDHMQMHGMMGKSENELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRAFRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_CP017031.1|WP_002858431.1|1461432_1462581_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCEESAGALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLNAKNELQMIREFSYKDYSLRN
>NZ_CP017031.1|WP_079005335.1|1460415_1461129_-|molecular-chaperone-TorD-family-protein
MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NZ_CP017031.1|WP_002851537.1|1460249_1460441_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NZ_CP017031.1|WP_010891941.1|1457445_1460250_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAYYIRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTVEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_CP017031.1|WP_002851264.1|1456807_1457449_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_CP017031.1|WP_002851174.1|1455878_1456811_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGEVFGGGVFVRVCKNLHAFATILFIISIIPMFLCWIKRMLPASYDIRWMMIVGGYLSKIKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NZ_CP017031.1|WP_171823035.1|1466739_1467153_-|CRISPR-associated-endonuclease-Cas2
MRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNVTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF
>NZ_CP017031.1|WP_002819068.1|1467163_1468054_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFVLKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_CP017031.1|WP_002876343.1|1471220_1471403_+|hypothetical-protein
MPIFMICSTLLAVIVVAYYILKKYNPIFVFFLSGIILLIFAFYITGTPIPKTPSREYTSF
>NZ_CP017031.1|WP_002876346.1|1472695_1473685_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNTFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALSSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NZ_CP017031.1|WP_002890120.1|1473745_1474351_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLDFKSISADKIAHKILDENALELEKIFSPFSLKNLLTKEKKIDRKILGKIVFNNKEAKKILENFTHPKIRAKILEQIQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGKM
>NZ_CP017031.1|WP_002876348.1|1474347_1475097_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGVIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFAYKNEELFFEGKVKYCFEANYNFF
>NZ_CP017031.1|WP_002851407.1|1475071_1475803_+|glucosaminidase-domain-containing-protein
MKPIIIFFSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_CP017031.1|WP_002851155.1|1475799_1476837_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINIPIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFEVISFDKFSLGF
>NZ_CP017031.1|WP_002851546.1|1476901_1477351_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM
>NZ_CP017031.1|WP_002855462.1|1477480_1478701_-|glucose-6-phosphate-isomerase
MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNLIDESLQFIQDKEYVKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFNKTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLHQEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKKDEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIALIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELLNAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPGVEVGKLILKNILNS

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	MN530981	Campylobacter phage DA10, complete genome	33856-33885	0	1.0
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	MN530981	Campylobacter phage DA10, complete genome	33856-33885	0	1.0
NZ_CP017031_2	2.2|1466332|30|NZ_CP017031|CRT	1466332-1466361	30	MN530981	Campylobacter phage DA10, complete genome	20527-20556	1	0.967
NZ_CP017031_2	2.5|1466530|30|NZ_CP017031|CRT	1466530-1466559	30	MN530981	Campylobacter phage DA10, complete genome	2113-2142	1	0.967
NZ_CP017031_2	2.7|1466333|30|NZ_CP017031|PILER-CR	1466333-1466362	30	MN530981	Campylobacter phage DA10, complete genome	20527-20556	1	0.967
NZ_CP017031_2	2.10|1466531|30|NZ_CP017031|PILER-CR	1466531-1466560	30	MN530981	Campylobacter phage DA10, complete genome	2113-2142	1	0.967
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	MN530981	Campylobacter phage DA10, complete genome	33856-33886	1	0.968
NZ_CP017031_2	2.12|1466332|31|NZ_CP017031|CRISPRCasFinder	1466332-1466362	31	MN530981	Campylobacter phage DA10, complete genome	20526-20556	1	0.968
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	NC_041859	Flavobacterium phage 23T, complete genome	19232-19261	2	0.933
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	KU599889	Flavobacterium phage 1H, complete genome	18331-18360	2	0.933
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	NC_031926	Flavobacterium phage 2A, complete genome	22247-22276	2	0.933
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	MK764450	Flavobacterium phage FPSV-D35, complete genome	1910-1939	2	0.933
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	KC959568	Flavobacterium phage 6H, complete genome	21375-21404	2	0.933
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	MK764437	Flavobacterium phage FPSV-D15, complete genome	39283-39312	2	0.933
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	MK764440	Flavobacterium phage FPSV-F7, complete genome	15976-16005	2	0.933
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	NC_041859	Flavobacterium phage 23T, complete genome	19232-19261	2	0.933
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	KU599889	Flavobacterium phage 1H, complete genome	18331-18360	2	0.933
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	NC_031926	Flavobacterium phage 2A, complete genome	22247-22276	2	0.933
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	MK764450	Flavobacterium phage FPSV-D35, complete genome	1910-1939	2	0.933
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	KC959568	Flavobacterium phage 6H, complete genome	21375-21404	2	0.933
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	MK764437	Flavobacterium phage FPSV-D15, complete genome	39283-39312	2	0.933
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	MK764440	Flavobacterium phage FPSV-F7, complete genome	15976-16005	2	0.933
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	MK764437	Flavobacterium phage FPSV-D15, complete genome	39283-39313	2	0.935
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	MK764440	Flavobacterium phage FPSV-F7, complete genome	15976-16006	2	0.935
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	NC_041859	Flavobacterium phage 23T, complete genome	19231-19261	2	0.935
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	KU599889	Flavobacterium phage 1H, complete genome	18330-18360	2	0.935
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	NC_031926	Flavobacterium phage 2A, complete genome	22246-22276	2	0.935
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	MK764450	Flavobacterium phage FPSV-D35, complete genome	1909-1939	2	0.935
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	KC959568	Flavobacterium phage 6H, complete genome	21374-21404	2	0.935
NZ_CP017031_2	2.15|1466530|31|NZ_CP017031|CRISPRCasFinder	1466530-1466560	31	MN530981	Campylobacter phage DA10, complete genome	2112-2142	2	0.935
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	MN855683	Siphoviridae sp. isolate 326, complete genome	2602-2631	4	0.867
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	MN855683	Siphoviridae sp. isolate 326, complete genome	2602-2631	4	0.867
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	MN855683	Siphoviridae sp. isolate 326, complete genome	2601-2631	5	0.839
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	NZ_CP017864	Campylobacter jejuni strain IF1100 plasmid pCJDM100, complete sequence	3353-3382	6	0.8
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	NZ_CP017864	Campylobacter jejuni strain IF1100 plasmid pCJDM100, complete sequence	3353-3382	6	0.8
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	MT741943	Acinetobacter phage Meroveus, complete genome	17161-17190	7	0.767
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	MT409116	Acinetobacter phage Octan, complete genome	17034-17063	7	0.767
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	NZ_CP014569	Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence	3321-3350	7	0.767
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	NZ_CP027787	Tetragenococcus koreensis strain KCTC 3924 plasmid pTK, complete sequence	10567-10596	7	0.767
NZ_CP017031_2	2.2|1466332|30|NZ_CP017031|CRT	1466332-1466361	30	MT774379	CrAssphage cr118_1, complete genome	84169-84198	7	0.767
NZ_CP017031_2	2.2|1466332|30|NZ_CP017031|CRT	1466332-1466361	30	JF974298	Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces	13735-13764	7	0.767
NZ_CP017031_2	2.2|1466332|30|NZ_CP017031|CRT	1466332-1466361	30	MT074146	Bacteroides phage SJC03, complete genome	132713-132742	7	0.767
NZ_CP017031_2	2.5|1466530|30|NZ_CP017031|CRT	1466530-1466559	30	AP013642	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***	13257-13286	7	0.767
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	MT741943	Acinetobacter phage Meroveus, complete genome	17161-17190	7	0.767
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	MT409116	Acinetobacter phage Octan, complete genome	17034-17063	7	0.767
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	NZ_CP014569	Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence	3321-3350	7	0.767
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	NZ_CP027787	Tetragenococcus koreensis strain KCTC 3924 plasmid pTK, complete sequence	10567-10596	7	0.767
NZ_CP017031_2	2.7|1466333|30|NZ_CP017031|PILER-CR	1466333-1466362	30	MT774379	CrAssphage cr118_1, complete genome	84169-84198	7	0.767
NZ_CP017031_2	2.7|1466333|30|NZ_CP017031|PILER-CR	1466333-1466362	30	JF974298	Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces	13735-13764	7	0.767
NZ_CP017031_2	2.7|1466333|30|NZ_CP017031|PILER-CR	1466333-1466362	30	MT074146	Bacteroides phage SJC03, complete genome	132713-132742	7	0.767
NZ_CP017031_2	2.10|1466531|30|NZ_CP017031|PILER-CR	1466531-1466560	30	AP013642	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***	13257-13286	7	0.767
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	NZ_CP017864	Campylobacter jejuni strain IF1100 plasmid pCJDM100, complete sequence	3353-3383	7	0.774
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	MH707430	Bacillus phage BSP7, complete genome	43758-43788	7	0.774
NZ_CP017031_2	2.12|1466332|31|NZ_CP017031|CRISPRCasFinder	1466332-1466362	31	MT774379	CrAssphage cr118_1, complete genome	84169-84199	7	0.774
NZ_CP017031_2	2.12|1466332|31|NZ_CP017031|CRISPRCasFinder	1466332-1466362	31	JF974298	Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces	13735-13765	7	0.774
NZ_CP017031_2	2.15|1466530|31|NZ_CP017031|CRISPRCasFinder	1466530-1466560	31	AP013642	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***	13256-13286	7	0.774
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	MH884508	Bacillus phage vB_BcoS-136, complete genome	85145-85174	8	0.733
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	310294-310323	8	0.733
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	AP014494	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces	31892-31921	8	0.733
NZ_CP017031_2	2.5|1466530|30|NZ_CP017031|CRT	1466530-1466559	30	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	91924-91953	8	0.733
NZ_CP017031_2	2.5|1466530|30|NZ_CP017031|CRT	1466530-1466559	30	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	81516-81545	8	0.733
NZ_CP017031_2	2.5|1466530|30|NZ_CP017031|CRT	1466530-1466559	30	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	129333-129362	8	0.733
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	MH884508	Bacillus phage vB_BcoS-136, complete genome	85145-85174	8	0.733
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	310294-310323	8	0.733
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	AP014494	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces	31892-31921	8	0.733
NZ_CP017031_2	2.10|1466531|30|NZ_CP017031|PILER-CR	1466531-1466560	30	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	91924-91953	8	0.733
NZ_CP017031_2	2.10|1466531|30|NZ_CP017031|PILER-CR	1466531-1466560	30	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	81516-81545	8	0.733
NZ_CP017031_2	2.10|1466531|30|NZ_CP017031|PILER-CR	1466531-1466560	30	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	129333-129362	8	0.733
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	MT741943	Acinetobacter phage Meroveus, complete genome	17160-17190	8	0.742
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	MT409116	Acinetobacter phage Octan, complete genome	17033-17063	8	0.742
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	NZ_CP014569	Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence	3320-3350	8	0.742
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	NZ_CP027787	Tetragenococcus koreensis strain KCTC 3924 plasmid pTK, complete sequence	10566-10596	8	0.742
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	NZ_CP016630	Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence	11765-11794	9	0.7
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	NZ_CP016630	Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence	37697-37726	9	0.7
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	CP024782	Lactobacillus johnsonii pf01 plasmid pLJPF01L, complete sequence	4382-4411	9	0.7
NZ_CP017031_2	2.1|1466266|30|NZ_CP017031|CRT	1466266-1466295	30	MH707430	Bacillus phage BSP7, complete genome	43759-43788	9	0.7
NZ_CP017031_2	2.4|1466464|30|NZ_CP017031|CRT	1466464-1466493	30	MN693357	Marine virus AFVG_25M390, complete genome	22622-22651	9	0.7
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	NZ_CP016630	Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence	11765-11794	9	0.7
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	NZ_CP016630	Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence	37697-37726	9	0.7
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	CP024782	Lactobacillus johnsonii pf01 plasmid pLJPF01L, complete sequence	4382-4411	9	0.7
NZ_CP017031_2	2.6|1466267|30|NZ_CP017031|PILER-CR	1466267-1466296	30	MH707430	Bacillus phage BSP7, complete genome	43759-43788	9	0.7
NZ_CP017031_2	2.9|1466465|30|NZ_CP017031|PILER-CR	1466465-1466494	30	MN693357	Marine virus AFVG_25M390, complete genome	22622-22651	9	0.7
NZ_CP017031_2	2.11|1466266|31|NZ_CP017031|CRISPRCasFinder	1466266-1466296	31	MH884508	Bacillus phage vB_BcoS-136, complete genome	85144-85174	9	0.71
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	AP014494	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces	31892-31922	9	0.71
NZ_CP017031_2	2.15|1466530|31|NZ_CP017031|CRISPRCasFinder	1466530-1466560	31	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	91924-91954	9	0.71
NZ_CP017031_2	2.15|1466530|31|NZ_CP017031|CRISPRCasFinder	1466530-1466560	31	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	81516-81546	9	0.71
NZ_CP017031_2	2.15|1466530|31|NZ_CP017031|CRISPRCasFinder	1466530-1466560	31	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	129332-129362	9	0.71
NZ_CP017031_1	1.1|1342475|34|NZ_CP017031|CRISPRCasFinder	1342475-1342508	34	MH752385	Bacillus phage Ray17, complete genome	8509-8542	10	0.706
NZ_CP017031_2	2.2|1466332|30|NZ_CP017031|CRT	1466332-1466361	30	MN693600	Marine virus AFVG_25M483, complete genome	8561-8590	10	0.667
NZ_CP017031_2	2.2|1466332|30|NZ_CP017031|CRT	1466332-1466361	30	MN693098	Marine virus AFVG_25M144, complete genome	23771-23800	10	0.667
NZ_CP017031_2	2.7|1466333|30|NZ_CP017031|PILER-CR	1466333-1466362	30	MN693600	Marine virus AFVG_25M483, complete genome	8561-8590	10	0.667
NZ_CP017031_2	2.7|1466333|30|NZ_CP017031|PILER-CR	1466333-1466362	30	MN693098	Marine virus AFVG_25M144, complete genome	23771-23800	10	0.667
NZ_CP017031_2	2.14|1466464|31|NZ_CP017031|CRISPRCasFinder	1466464-1466494	31	MN693357	Marine virus AFVG_25M390, complete genome	22621-22651	10	0.677

1. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

ataatttctaatttcatttataacctttca	CRISPR spacer
ataatttctaatttcatttataacctttca	Protospacer
******************************

2. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

ataatttctaatttcatttataacctttca	CRISPR spacer
ataatttctaatttcatttataacctttca	Protospacer
******************************

3. spacer 2.2|1466332|30|NZ_CP017031|CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtggctaagaataaaataagaaacactg	Protospacer
****.*************************

4. spacer 2.5|1466530|30|NZ_CP017031|CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

atttaataagtggtattgttgaaattaaga	CRISPR spacer
atttaataagtggtattattgaaattaaga	Protospacer
*****************.************

5. spacer 2.7|1466333|30|NZ_CP017031|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtggctaagaataaaataagaaacactg	Protospacer
****.*************************

6. spacer 2.10|1466531|30|NZ_CP017031|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

atttaataagtggtattgttgaaattaaga	CRISPR spacer
atttaataagtggtattattgaaattaaga	Protospacer
*****************.************

7. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.968

ataatttctaatttcatttataacctttcag	CRISPR spacer
ataatttctaatttcatttataacctttcaa	Protospacer
******************************.

8. spacer 2.12|1466332|31|NZ_CP017031|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.968

tagtagctaagaataaaataagaaacactgg	CRISPR spacer
tagtggctaagaataaaataagaaacactgg	Protospacer
****.**************************

9. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to NC_041859 (Flavobacterium phage 23T, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

10. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to KU599889 (Flavobacterium phage 1H, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

11. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to NC_031926 (Flavobacterium phage 2A, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

12. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to MK764450 (Flavobacterium phage FPSV-D35, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

13. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to KC959568 (Flavobacterium phage 6H, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

14. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to MK764437 (Flavobacterium phage FPSV-D15, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

15. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to MK764440 (Flavobacterium phage FPSV-F7, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

16. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to NC_041859 (Flavobacterium phage 23T, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

17. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to KU599889 (Flavobacterium phage 1H, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

18. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to NC_031926 (Flavobacterium phage 2A, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

19. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to MK764450 (Flavobacterium phage FPSV-D35, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

20. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to KC959568 (Flavobacterium phage 6H, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

21. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to MK764437 (Flavobacterium phage FPSV-D15, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

22. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to MK764440 (Flavobacterium phage FPSV-F7, complete genome) position: , mismatch: 2, identity: 0.933

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
gttaaaaggattttgctttgtgattgggag	Protospacer
********************.********.

23. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to MK764437 (Flavobacterium phage FPSV-D15, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

24. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to MK764440 (Flavobacterium phage FPSV-F7, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

25. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to NC_041859 (Flavobacterium phage 23T, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

26. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to KU599889 (Flavobacterium phage 1H, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

27. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to NC_031926 (Flavobacterium phage 2A, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

28. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to MK764450 (Flavobacterium phage FPSV-D35, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

29. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to KC959568 (Flavobacterium phage 6H, complete genome) position: , mismatch: 2, identity: 0.935

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
gttaaaaggattttgctttgtgattgggagg	Protospacer
********************.********.*

30. spacer 2.15|1466530|31|NZ_CP017031|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 2, identity: 0.935

atttaataagtggtattgttgaaattaagag	CRISPR spacer
atttaataagtggtattattgaaattaagaa	Protospacer
*****************.************.

31. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to MN855683 (Siphoviridae sp. isolate 326, complete genome) position: , mismatch: 4, identity: 0.867

ataattt-ctaatttcatttataacctttca	CRISPR spacer
-taatctgctaatttcatttttaacctctca	Protospacer
 ****.* ************ ******.***

32. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to MN855683 (Siphoviridae sp. isolate 326, complete genome) position: , mismatch: 4, identity: 0.867

ataattt-ctaatttcatttataacctttca	CRISPR spacer
-taatctgctaatttcatttttaacctctca	Protospacer
 ****.* ************ ******.***

33. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to MN855683 (Siphoviridae sp. isolate 326, complete genome) position: , mismatch: 5, identity: 0.839

ataattt-ctaatttcatttataacctttcag	CRISPR spacer
-taatctgctaatttcatttttaacctctcaa	Protospacer
 ****.* ************ ******.***.

34. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to NZ_CP017864 (Campylobacter jejuni strain IF1100 plasmid pCJDM100, complete sequence) position: , mismatch: 6, identity: 0.8

ataatttctaatttcatttataacctttca	CRISPR spacer
taaatttctaacttcatttataacttttgc	Protospacer
  *********.************.***  

35. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to NZ_CP017864 (Campylobacter jejuni strain IF1100 plasmid pCJDM100, complete sequence) position: , mismatch: 6, identity: 0.8

ataatttctaatttcatttataacctttca	CRISPR spacer
taaatttctaacttcatttataacttttgc	Protospacer
  *********.************.***  

36. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to MT741943 (Acinetobacter phage Meroveus, complete genome) position: , mismatch: 7, identity: 0.767

ataatttctaatttcatttataacctttca	CRISPR spacer
ggcttttttaattttatttataacctttga	Protospacer
.   ***.******.************* *

37. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to MT409116 (Acinetobacter phage Octan, complete genome) position: , mismatch: 7, identity: 0.767

ataatttctaatttcatttataacctttca	CRISPR spacer
ggcttttttaattttatttataacctttga	Protospacer
.   ***.******.************* *

38. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to NZ_CP014569 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence) position: , mismatch: 7, identity: 0.767

ataatttctaatttcatttataacctttca	CRISPR spacer
agcctttttaatatcatttataaccttact	Protospacer
*   ***.**** ************** * 

39. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to NZ_CP027787 (Tetragenococcus koreensis strain KCTC 3924 plasmid pTK, complete sequence) position: , mismatch: 7, identity: 0.767

ataatttctaatttcatttataacctttca	CRISPR spacer
ttgatttctaatttcattttaaacctccta	Protospacer
 *.****************  *****...*

40. spacer 2.2|1466332|30|NZ_CP017031|CRT matches to MT774379 (CrAssphage cr118_1, complete genome) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
gcatagctaagaatataataagaaaatcta	Protospacer
  .************ *********  **.

41. spacer 2.2|1466332|30|NZ_CP017031|CRT matches to JF974298 (Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtaactaagaataaattaagaggttcag	Protospacer
*****.*********** *****... * *

42. spacer 2.2|1466332|30|NZ_CP017031|CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tattttaaaagaataaaataaaaaacactc	Protospacer
** *    *************.******* 

43. spacer 2.5|1466530|30|NZ_CP017031|CRT matches to AP013642 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

atttaataagtggtattgttgaaattaaga	CRISPR spacer
atttaataagtgatattgttaaaggttact	Protospacer
************.*******.**. * *  

44. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to MT741943 (Acinetobacter phage Meroveus, complete genome) position: , mismatch: 7, identity: 0.767

ataatttctaatttcatttataacctttca	CRISPR spacer
ggcttttttaattttatttataacctttga	Protospacer
.   ***.******.************* *

45. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to MT409116 (Acinetobacter phage Octan, complete genome) position: , mismatch: 7, identity: 0.767

ataatttctaatttcatttataacctttca	CRISPR spacer
ggcttttttaattttatttataacctttga	Protospacer
.   ***.******.************* *

46. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to NZ_CP014569 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence) position: , mismatch: 7, identity: 0.767

ataatttctaatttcatttataacctttca	CRISPR spacer
agcctttttaatatcatttataaccttact	Protospacer
*   ***.**** ************** * 

47. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to NZ_CP027787 (Tetragenococcus koreensis strain KCTC 3924 plasmid pTK, complete sequence) position: , mismatch: 7, identity: 0.767

ataatttctaatttcatttataacctttca	CRISPR spacer
ttgatttctaatttcattttaaacctccta	Protospacer
 *.****************  *****...*

48. spacer 2.7|1466333|30|NZ_CP017031|PILER-CR matches to MT774379 (CrAssphage cr118_1, complete genome) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
gcatagctaagaatataataagaaaatcta	Protospacer
  .************ *********  **.

49. spacer 2.7|1466333|30|NZ_CP017031|PILER-CR matches to JF974298 (Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtaactaagaataaattaagaggttcag	Protospacer
*****.*********** *****... * *

50. spacer 2.7|1466333|30|NZ_CP017031|PILER-CR matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 7, identity: 0.767

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tattttaaaagaataaaataaaaaacactc	Protospacer
** *    *************.******* 

51. spacer 2.10|1466531|30|NZ_CP017031|PILER-CR matches to AP013642 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

atttaataagtggtattgttgaaattaaga	CRISPR spacer
atttaataagtgatattgttaaaggttact	Protospacer
************.*******.**. * *  

52. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to NZ_CP017864 (Campylobacter jejuni strain IF1100 plasmid pCJDM100, complete sequence) position: , mismatch: 7, identity: 0.774

ataatttctaatttcatttataacctttcag	CRISPR spacer
taaatttctaacttcatttataacttttgca	Protospacer
  *********.************.***  .

53. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to MH707430 (Bacillus phage BSP7, complete genome) position: , mismatch: 7, identity: 0.774

ataatttctaatttcatttataac--ctttcag	CRISPR spacer
ataactgctaatttcatttataatgacctcc--	Protospacer
****.* ****************.  *.*.*  

54. spacer 2.12|1466332|31|NZ_CP017031|CRISPRCasFinder matches to MT774379 (CrAssphage cr118_1, complete genome) position: , mismatch: 7, identity: 0.774

tagtagctaagaataaaataagaaacactgg	CRISPR spacer
gcatagctaagaatataataagaaaatctag	Protospacer
  .************ *********  **.*

55. spacer 2.12|1466332|31|NZ_CP017031|CRISPRCasFinder matches to JF974298 (Methylophilales phage HIM624-A, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces) position: , mismatch: 7, identity: 0.774

tagtagctaagaataaaataagaaacactgg	CRISPR spacer
tagtaactaagaataaattaagaggttcagg	Protospacer
*****.*********** *****... * **

56. spacer 2.15|1466530|31|NZ_CP017031|CRISPRCasFinder matches to AP013642 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C42-MedDCM-OCT-S37-C124, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.774

atttaataagtggtattgttgaaattaagag	CRISPR spacer
atttaataagtgatattgttaaaggttactg	Protospacer
************.*******.**. * *  *

57. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to MH884508 (Bacillus phage vB_BcoS-136, complete genome) position: , mismatch: 8, identity: 0.733

ataatttctaatttcatttataacctttca	CRISPR spacer
ataatttctaattccatttctaactgcatc	Protospacer
*************.***** ****. . . 

58. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 8, identity: 0.733

ataatttctaatttcatttataacctttca	CRISPR spacer
ataatttttaatttcatttattgttatttt	Protospacer
*******.************* ... **. 

59. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to AP014494 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 8, identity: 0.733

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
ttcaaaaggatttttctttgccattgccgc	Protospacer
 *.*********** ****** ****  . 

60. spacer 2.5|1466530|30|NZ_CP017031|CRT matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 8, identity: 0.733

atttaataagtggtattgttgaaattaaga	CRISPR spacer
taactataagtggcattattgaaattaaaa	Protospacer
   . ********.***.**********.*

61. spacer 2.5|1466530|30|NZ_CP017031|CRT matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 8, identity: 0.733

atttaataagtggtattgttgaaattaaga	CRISPR spacer
taactataagtggcattattgaaattaaaa	Protospacer
   . ********.***.**********.*

62. spacer 2.5|1466530|30|NZ_CP017031|CRT matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 8, identity: 0.733

atttaataagtggtattgttgaaattaaga	CRISPR spacer
ctttaataagtagttttgttgaaaactcta	Protospacer
 **********.** ********* .   *

63. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to MH884508 (Bacillus phage vB_BcoS-136, complete genome) position: , mismatch: 8, identity: 0.733

ataatttctaatttcatttataacctttca	CRISPR spacer
ataatttctaattccatttctaactgcatc	Protospacer
*************.***** ****. . . 

64. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 8, identity: 0.733

ataatttctaatttcatttataacctttca	CRISPR spacer
ataatttttaatttcatttattgttatttt	Protospacer
*******.************* ... **. 

65. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to AP014494 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 8, identity: 0.733

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
ttcaaaaggatttttctttgccattgccgc	Protospacer
 *.*********** ****** ****  . 

66. spacer 2.10|1466531|30|NZ_CP017031|PILER-CR matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 8, identity: 0.733

atttaataagtggtattgttgaaattaaga	CRISPR spacer
taactataagtggcattattgaaattaaaa	Protospacer
   . ********.***.**********.*

67. spacer 2.10|1466531|30|NZ_CP017031|PILER-CR matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 8, identity: 0.733

atttaataagtggtattgttgaaattaaga	CRISPR spacer
taactataagtggcattattgaaattaaaa	Protospacer
   . ********.***.**********.*

68. spacer 2.10|1466531|30|NZ_CP017031|PILER-CR matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 8, identity: 0.733

atttaataagtggtattgttgaaattaaga	CRISPR spacer
ctttaataagtagttttgttgaaaactcta	Protospacer
 **********.** ********* .   *

69. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to MT741943 (Acinetobacter phage Meroveus, complete genome) position: , mismatch: 8, identity: 0.742

ataatttctaatttcatttataacctttcag	CRISPR spacer
ggcttttttaattttatttataacctttgat	Protospacer
.   ***.******.************* * 

70. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to MT409116 (Acinetobacter phage Octan, complete genome) position: , mismatch: 8, identity: 0.742

ataatttctaatttcatttataacctttcag	CRISPR spacer
ggcttttttaattttatttataacctttgat	Protospacer
.   ***.******.************* * 

71. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to NZ_CP014569 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp1, complete sequence) position: , mismatch: 8, identity: 0.742

ataatttctaatttcatttataacctttcag	CRISPR spacer
agcctttttaatatcatttataaccttactt	Protospacer
*   ***.**** ************** *  

72. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to NZ_CP027787 (Tetragenococcus koreensis strain KCTC 3924 plasmid pTK, complete sequence) position: , mismatch: 8, identity: 0.742

ataatttctaatttcatttataacctttcag	CRISPR spacer
ttgatttctaatttcattttaaacctcctac	Protospacer
 *.****************  *****...* 

73. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to NZ_CP016630 (Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence) position: , mismatch: 9, identity: 0.7

ataatttctaatttcatttataacctttca	CRISPR spacer
tggatttctattttcatttataactcctgt	Protospacer
  .******* *************...*  

74. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to NZ_CP016630 (Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence) position: , mismatch: 9, identity: 0.7

ataatttctaatttcatttataacctttca	CRISPR spacer
tggatttctattttcatttataactcctgt	Protospacer
  .******* *************...*  

75. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to CP024782 (Lactobacillus johnsonii pf01 plasmid pLJPF01L, complete sequence) position: , mismatch: 9, identity: 0.7

ataatttctaatttcatttataacctttca	CRISPR spacer
tggatttctattttcatttataactcctgt	Protospacer
  .******* *************...*  

76. spacer 2.1|1466266|30|NZ_CP017031|CRT matches to MH707430 (Bacillus phage BSP7, complete genome) position: , mismatch: 9, identity: 0.7

ataatttctaatttcatttataacctttca	CRISPR spacer
ataactgctaatttcatttataatgacctc	Protospacer
****.* ****************.  ... 

77. spacer 2.4|1466464|30|NZ_CP017031|CRT matches to MN693357 (Marine virus AFVG_25M390, complete genome) position: , mismatch: 9, identity: 0.7

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
agtaaaaggtttttgctttgctattttact	Protospacer
. ******* *********** ***  .  

78. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to NZ_CP016630 (Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence) position: , mismatch: 9, identity: 0.7

ataatttctaatttcatttataacctttca	CRISPR spacer
tggatttctattttcatttataactcctgt	Protospacer
  .******* *************...*  

79. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to NZ_CP016630 (Lactobacillus johnsonii strain BS15 plasmid LJBSp1, complete sequence) position: , mismatch: 9, identity: 0.7

ataatttctaatttcatttataacctttca	CRISPR spacer
tggatttctattttcatttataactcctgt	Protospacer
  .******* *************...*  

80. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to CP024782 (Lactobacillus johnsonii pf01 plasmid pLJPF01L, complete sequence) position: , mismatch: 9, identity: 0.7

ataatttctaatttcatttataacctttca	CRISPR spacer
tggatttctattttcatttataactcctgt	Protospacer
  .******* *************...*  

81. spacer 2.6|1466267|30|NZ_CP017031|PILER-CR matches to MH707430 (Bacillus phage BSP7, complete genome) position: , mismatch: 9, identity: 0.7

ataatttctaatttcatttataacctttca	CRISPR spacer
ataactgctaatttcatttataatgacctc	Protospacer
****.* ****************.  ... 

82. spacer 2.9|1466465|30|NZ_CP017031|PILER-CR matches to MN693357 (Marine virus AFVG_25M390, complete genome) position: , mismatch: 9, identity: 0.7

gttaaaaggattttgctttgcgattgggaa	CRISPR spacer
agtaaaaggtttttgctttgctattttact	Protospacer
. ******* *********** ***  .  

83. spacer 2.11|1466266|31|NZ_CP017031|CRISPRCasFinder matches to MH884508 (Bacillus phage vB_BcoS-136, complete genome) position: , mismatch: 9, identity: 0.71

ataatttctaatttcatttataacctttcag	CRISPR spacer
ataatttctaattccatttctaactgcatca	Protospacer
*************.***** ****. . . .

84. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to AP014494 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C46-MedDCM-OCT-S46-C77, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 9, identity: 0.71

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
ttcaaaaggatttttctttgccattgccgca	Protospacer
 *.*********** ****** ****  . .

85. spacer 2.15|1466530|31|NZ_CP017031|CRISPRCasFinder matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 9, identity: 0.71

atttaataagtggtattgttgaaattaagag	CRISPR spacer
taactataagtggcattattgaaattaaaat	Protospacer
   . ********.***.**********.* 

86. spacer 2.15|1466530|31|NZ_CP017031|CRISPRCasFinder matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 9, identity: 0.71

atttaataagtggtattgttgaaattaagag	CRISPR spacer
taactataagtggcattattgaaattaaaat	Protospacer
   . ********.***.**********.* 

87. spacer 2.15|1466530|31|NZ_CP017031|CRISPRCasFinder matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 9, identity: 0.71

atttaataagtggtattgttgaaattaagag	CRISPR spacer
ctttaataagtagttttgttgaaaactctaa	Protospacer
 **********.** ********* .   *.

88. spacer 1.1|1342475|34|NZ_CP017031|CRISPRCasFinder matches to MH752385 (Bacillus phage Ray17, complete genome) position: , mismatch: 10, identity: 0.706

ttttttagctttatactcagccttactcatataa	CRISPR spacer
cttacaagctttatactcagccttattgatcgtt	Protospacer
.** . *******************.* **    

89. spacer 2.2|1466332|30|NZ_CP017031|CRT matches to MN693600 (Marine virus AFVG_25M483, complete genome) position: , mismatch: 10, identity: 0.667

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtagcaaagaataaaataaactgtgaca	Protospacer
******* *************.  ... ..

90. spacer 2.2|1466332|30|NZ_CP017031|CRT matches to MN693098 (Marine virus AFVG_25M144, complete genome) position: , mismatch: 10, identity: 0.667

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtagcaaagaataaaataaactgtgaca	Protospacer
******* *************.  ... ..

91. spacer 2.7|1466333|30|NZ_CP017031|PILER-CR matches to MN693600 (Marine virus AFVG_25M483, complete genome) position: , mismatch: 10, identity: 0.667

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtagcaaagaataaaataaactgtgaca	Protospacer
******* *************.  ... ..

92. spacer 2.7|1466333|30|NZ_CP017031|PILER-CR matches to MN693098 (Marine virus AFVG_25M144, complete genome) position: , mismatch: 10, identity: 0.667

tagtagctaagaataaaataagaaacactg	CRISPR spacer
tagtagcaaagaataaaataaactgtgaca	Protospacer
******* *************.  ... ..

93. spacer 2.14|1466464|31|NZ_CP017031|CRISPRCasFinder matches to MN693357 (Marine virus AFVG_25M390, complete genome) position: , mismatch: 10, identity: 0.677

gttaaaaggattttgctttgcgattgggaag	CRISPR spacer
agtaaaaggtttttgctttgctattttactt	Protospacer
. ******* *********** ***  .   

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1372196 : 1382438	9	Tupanvirus(25.0%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP017031|1372196:1382438|DBSCAN-SWA
AATGGATAAATTTAAAAATATCTTTTTAAATAAAGTTTTTAATAAAAATCAAGAGCAATATGCTTTAATCTATGAAGAACAAAAATATACTTACAATGATTTGTATAATAACATCATCAATAAAATCAATTTATTAACAAAGCTTAAAGATATAAATATTGTGGGTATTACAGGAGATTATGATTTTGAAAGTATAAGTTTATTTTTAGCATGTATTGAGCTTAATAAAATAATCATTCCATTTATCAATGAAAGTGAGATTGACAACAAACTTGCCGAAGTTAATTGCGATATTTTATTTAAAAACAATCAATACGAGCTACAGAAAAAACATTGTAACAATCATGATTTAATCCAAAAACTCATAGATGATAACAAACCTGGTTTAATTTTATTTTCAAGTGGCAGCACAGGTAAACCTAAAGCTATGGTGCATAATCTTGATAAGATTTTAAATGCCTATCTTAATAAAAAATCAAAAAAACTTAATATTTTATTGTTTTTAATGTTTGATCATATAGGTGGTTTAAATACTTTGTTTAACTGTCTTAGTATGAATGCTTGTGCAATTGCTATAAAGGAAAGAAAAAATATTGAAGCTCTAGCTCAAACCATAGAAAAATATCAAATTTCACTCTTACCTGCTTCACCTTCTTTACTTAGTTTAATGTTGGTAGCAAATGTAATTGAAAAATATAATTTAAGCTCTTTAAAGATTATTAGCTATGGCACAGAAAAAATGCCAGAAGCTTTGCTTGTAAAATTAAAACAAACTTTTCCAAAAGTTAAATTTCATCAAACCTTTGGTACAAGCGAAGTAGGCATAGCTCAAACAAAAAGCTTCGGAAATTACTTTAAATTGGAAAATATAGCATATAAAATTATCAACAACGAGCTATTTTTAAAAAGCAATATGCAAAGTTTGGGTTATTTAAATGCTGATAACTCTGTTTTTACAAATGATGGATACTTTGCTACTGGCGATTTGGTTGAAGTGATTAATGAAAATGGTGAAGAATATATTAAAATTATCGGAAGAAACAAAGAAGTTATTAATGTTGGCGGAGAAAAAGTATTACCCCAAGAAGTAGAGGGTATATTAATGCAAATACCATTTATACAAGATTGTTTAGTCTATGGACAAAATAATCCTCTAACGGGCCAAAGTGTCTGTGTAAAGATTGTATTAGAACAAAATGAAAATCCTGCTAATTTAGAAGCCAAAAAGGAAATAAGACTATTTTGCAAAGATAAACTAGCTAGCTATAAAATACCAACCAAAGTAGAGATTGTTCAAAAGTTAGAAATCAGCGAACGGTTTAAAAAAATAAGAAATTCTTAACTCTTTCTTATTTTTTGTAAATTTCACCCCTTCTTCCCAAACTCCCTCTTCAACCTAGGCACATCTTTGAATATAAATTTGATATACCCCCCCCCATACCAATTTTTATTAGCCTGCATTAAAGCTTCGCCTAATTTATAAGTAAAACATTCTTTTTCTTTTAAAGCTTCATTATAATCAGGATAAGTTTCTAAAGGAGGTAAAGCTAAATTTGGATTTTCTTTTATTTTTTCTTCATAGGCTTTTTGTTCAAATTTATGTTTGTTTTTTATATAAGATAATACATAAGGCATTCTTATATATCCTAATATACTTTTTGAATTAGCGATTAAAGCTTGTCCTAGTTTATAGGACAGATGGTTTTGAATACGAGCTTTAGCTGAATTAGCTTGAATAAAAGTAATTTTAGGATTTATTATGCTCATTTTTATACCCAAAGATTTAGCAAGTTTTTTACTTTCTAATTTTTTAATAATCAAATCTTGTTCTAGATTAGCTAATTCTAAACGTTGTTTTTTAATAGGAAAAGAATTAAGTTCATTTTGTAGGGTTGTTTTTTCTTGATTTAAAGTAGAGATGATATTATCTTTTTCTTTGATTTGTTTTTGCAAAGGAACTAATTTAACTGGATCCATTCTAAAATTATATTCTTCTATAGCTGTTTTATAATCCTCTACTGGAGGAACTAAATAAGTAAAATCATATTCTTTGTCAATTGTAATATTTTCATTTTGTATAAGTTTAATTTCTTCACTAAAGTCAAATTTTCCATTTTGATCAGCTAATAGAAAAGCGGATACGCCAAAAAAATTTAAAACATTGATTTTATTATTAATTAAAAGAGTGCCTGCTGAATTTTCGGTATGAGGTAAATTGTTATAATTAAAGAAAATATATGATTGCTTATCAATTATAAAATTAGTTTCATAAAATCCAAAACAATAATTATAAGCCGCTGCATTCTTAACTATACTTTTTTTTAGATTTTGTATAACTATGCTAGAATAAGTTTTTCTAATCTGATCATTAGTTTTAGCATATTTTACCTTATTCCATACATGTATTGCACATATATAATAATTAATGAAAGTATGTGGAAATTGTAATTTTATATCATTTTTTAAATAATATACTTTTTCTCTATGTTGTAAATCTTTTTCCTCTGTTAAAATTATATCTTCTTTATCGCATATAAACATATCTGGGGTACAAATAGAAAAGTTGGGGTTAATTTTACACATATTCAGTATTCTAGGAGGATAAAAATTCTCTATATTATGTGCAATATTTTTTCCAAGATTATACATAATTGTAGAAATTTGATGAGCTGGATCTGGATGCGATAAATAAAAATAATGGATATTTTTATTTATATAAAAGTCATGAACACTTATAAAATTAAATCCATATTTTTGACAACATTGTTTGTGTGCAGAATGAATAATATTGGCGAGTTTATTATGTTGATTAAAAAAATGTTGTTCAAATAATAATAAATCAACTACTTTGATATTTAAAAAAAATAATTCCTCAAATAACCAGTTAATATTTCTATAAGACTGCTCAATAGTCATATTTTGACAGATAACTTCATATAAATCTACTATATTAGTTTCCACAATTATTAAATCAGCTTCTTTGATTATTTTAATATTTTCTTGCTTATGTAATGTATATATTTTCGATAATGCAGAACTTCCACCTAAAGACAAATTATACAATGTGATATTTTCTTGCCTTAAGCCAAGTTGCAAACCATTAAAAACCAACGAATTGCTTGCGCCCAATAAAACAATTTTTTTCATAAATAATTCCTTAAATATTATAATTTATTTTTTAATTTTTAAAATTAATTTAGTTTATAGAATTATTGCCATCATCAAGCAAAACTACATTTTTATTGTTCATTTTTAAACCTTTCGTAATCACTAGGCACACCAATATCTATAAAATAATCATTAAAAATTTCAGCTCTAGTCTTTAATTTTTCACAATTTTCTTGTAAAAACTCTTCAAAAGAAAATTTTTTCTCTAAATCAAATTCATTAAAAATATCTTTAGTTAAAAGATAAATTCCACCATTGATTAAACTTTGCTTTTTAAATATTTTTTCCTCAAAAGAAATCACAAAACCTTGCTCATTAACATTTACTGTGCCATATCTATCAAAATCATTCATTTGTTTTAAAGCAAGGCAAATTTTACTTCCATTTAGCTTTAATTTGCTTAAATCTATGCCAAAAAAAGTATCGCCATTTAAAACATAAACTTCATTTTTTATAAATTTCAAAGCCTCTTTTATAGCTCCACCCGTTCCTAGAGGCTCTTTTTCTATACCGTATTTTATTTTTATGCCTAAAAACTCATCTTTAAAATACTCTTTTATCACTTCATATTTGTATGATACCGCTAAGATAACTTCTTTTATGCCTTGCTTTTTAAGATACTCAAAAATAAATTCTAAAAAAGGCTTATCATTTATCGGTGCCATAGGCTTTGGAATGTCTTTTATAACACTTTTAAGCCTTGTTCCTAAGCCGCCACAAAGTATTATTGCTTGCAAGAAAAACCTTTGCCGAAAAGCTCTTCTTCAACGATAGCACAAATAATATGTCCTATTAAAATATGCGCTTCTTGAATTCTTGGAGTGCAAGTTGAAGGCACTTTGATACAATAATCACAAAGCTCATTCATAGCCCCGCCATTAGCTCCGCTTAAGCCTATGCTTATGATTTCTTTTTGCTTGCAAAGCTCTAAAGCCTTTAAAATATTTTTACTATTTCCACTTGTAGAAATTCCTATAAAAACATCTCCCTTAACTCCTTGAGCTTGCACTTGTCTTGCAAACAAATTTTCATAACCATAATCATTGCTAATAGCAGTTAATATACTCGTGTCCGTTGAAAGTGCAATACTTGCGATCCCTGGTCTATCAAAATAAAATCTACTTACAAATTCCCCTGCAATATGCTGTGCATCTGCTGCGCTACCACCATTTCCTGCAAGTAAAGTTTTGTTACCATTTTTATAAGCTTTTATGACTTCTAATGAAGCATTCTTAATAAGAGTTATTAAATTCTCATCTTTTAAAATTTGCTCTTTTGCTAAAATAGAATCTGTAAAATGTTCTTTTATATAGGAATTTAAATTCTCCATGATTTAACCCCCTCTTTTGTAAATGAAAAATCTTGCACATAACCTTGCTCTTTGCTTAAAGCTTTGATTAAGTTGTATTTTTTTGTAGGATCCACAAAGAAAAACATAAATCCACCTGCTCCTGCTCCACTAGTTTTGCCACTATAAGCTCCATTATCTATAGCTAGTTTATAAATTCTTTCAAGCTCATCATTGCTAACGATTTCTGAAATGATTTTTTTTGACTGCCAAGACTTGCCTAAAATTTGTGCCAAAGCATCAAAATCCGCCTTAAACAAAGCTTCTTTCATCTTTATAGCATCTTGTTTTATAGCGTGCATAGCTTCAAGGGATTTTTCATCTCCGAGCTTTCCTTTTTTATGTTCTTCTATATCTTTTGCTTCTCTTGTAATATTTGTAAAATAAAGCACAGTTCTAGCTTCAAGCTCACTAGCTATCCAGTTTTTAATACGCAAAGGATTAACAATGACTCTTTTATTATCATAAAATTCCATAAAATTAAAGCCACCAAAAGTTGCGGCGTATTGATCTTGTGCTCCGCCTACTATGCCTAAATCTTCTCTTTCTATCTCATAAGCAAGCTTAGCGATTTCATATTCTCCTAAAGGTAGATTAAGCCATTCTGCAAAGGCTTTTATAACCCCTACAACCAAAGTTGAGCTTCCGCCCAAACCACTACCACTTGGTACATCTGAGTATGTATGCAAAGAAAAACTTAAAGGTTTTTTTGTAAAATCTTTTACAATGCGATTATAAATACTTTTAAAAATATCTAATTTTCCATCATCTCCTAAGAATTCTTTACTTTCGTACTCAGAGTAAGAATTTGTATCAGGAGAATCAAAAATGATTTTTGCATCTTCTCTTTCGATCAAAGTACAATGTATGTATAAAGATATAGTCGCATTTAAAACATAACCTGTGTATTTATCACAATATAAATTTATATCAGTCCCCCCACCTGCTAAACCAAGGCGGAGAGGAGTTTGCGTGCGTATGGTTTTCATCTATTTAAAGGAATCCTTCCTTTTTTTATCTCATCTCTCCAATGATTTAACAAATCCTCAAACATTTTTCTAGCTGCAATTTCTGGCTTCCAGCTGATATAGTTTTTGATTTTAGTATTGTCAAACATTTGATAGTCTGCATCAATAGGACGTAGTCTTTCTTCATCTTGTTCTATTTTTATATCTTTTCTTGTAGAAAATCCTAAAAGTATATCTATAACTTCAGGAAGCTTAAAAGCCTCTTCTCCTGCTATATTAAAAGCTTCTCCGCAAGGAATATTACCCTTTTGACTCTCAAGAGAAAGTAGATAATAAGCCCTTATAGCATCACGACAATCTTGAAAGGTTCTTACACTCGAAAGATTTCCAACCTTAACAACAGGCTCTTGATAACCCGCTTCAATTAAAGCAATTTGTTTTGCAACTGTACTTTCAAAAAACACATCAGAACGTCTTGGACCACTATGTGTTCCCATTCTTGTAACAAAGGTGCGAATGTTATAAGCTTCACCATAAAATCTTCCCAAATAATCAGCGCCGATTTTGCTTATACTATAAGGACTTGCACCGTGAAAAGCTGTTTCTTCATTAAGTTTAATCCCTACTTTTGCTTTACCATAAACTTCACTTGAAGAGCAGATATGCACTACAGGGTCATATCCATCTTTTGCCTTTAAAATTCTAATGTTTTCCAAAATATTTGCTGTGCCTATGATATTTGTTTGTAATGTTTCTATAGGTATGTCAAAAGAAGTTTTTGGGTAAGACTGTGCGGCCAAATGAAAGATCACATCCGGTCTTTGACTCTCAAAAAGTTTTTGAAGACTAGAGTAATCATTTAAATCTGCATAAAAAATACCTATTCTATCTTTTTTATTGATCCTATCACTTAAGTGATAGATATTGTCCATAGGTTCTTGCCAACGCATCATACCTATAACATCATAATCCGTATTTTCTAGCAAAAAATCTGCCATTTGCGAGCCAACTTGCCCTGTAAATCCTGTGATTAATGCTGTTTTTTTCATAACTGTTCCTATTGTCTTATATTTTGCTCTTTTAAATACCATTCGTACATCATTTTAATGCCGTCTTCAAGCTTGATTTTTGCCTTCCAGCCTAAATTTTGCAACCTTGAACTATCTAACATTCTATCCATTGTAGAATCTGGTTTTGAATTGTTAAACATAATTTCACCCTTAAATCCAACAATATTTTTAATCAAAAAAGCAAGTTCTTTTATACTTAAAAATTCCCCACTTCCTACATTAAAATGCGGTTCATTAGATGAAACAATATCTTTAAAATCTATATTTTTCATCACATAAATAGAAGCATCAGCTAAATCTTTTGCATGAATAAATTCCCTAATTACACTACCGCCACCCCAAATTTCTACGCTATCTTTACTTACACCAAATTTTTGTAAATATTCCATTGCTTGCTCTAAGGAATTCATTTGCAAATCCTTTAGAACCTCATCAATTTTATTTTCATCTAAAAGTTTTGCTAAATGAAATTTGCGAAGTAAAGCCGGTAAAACTTTTGCTTTTTGTAAATCAAACTCGGTTGTCTCTCCATACAGGTTTGCAAGATATAAAGTGATAAAATTTGTTCCATATTGTAAGTTATAACTTTCGCACATTTTTGTTCCTATAATTTTTGGCAAACCATATGCAATGGCTTTTAAATCTAGCTTTCCATCTAATAAATTCTCTTCTTTAATAGGATTTATAGCTTTTTGAGGGTAAGCCCAAGCAGATCCATAAAAAACAAGCTTTTTAACATTATTTTGATAAGATGAATGAATAATATTTGCTTGAAGTACGCTATTTTCATAAATTACATCGGCTGGAGTAAAAAGCCCTAAGGTATCAAGCTTGGCAGCACATAAAAAAACATATTCTGGTTTTTCTTTTGCGAAAAAATCAGTCACAGCTTTTTGATCTACTAAATCTAATTCTTTTCTTGTTTTTACGATAATATTATTAAAACCCTCATCTATAAGTGTATTATAAAGAGTTTTTCCTAAAGTGCCACCATGCCCTGCTATATAAATTTTAGAATCTTTAAGCATTGCAAACCCTTTTTGTAGAATTTGCAAAATCATAAATATTATTTGTATAAAAAGATTGAATGTTTGAAAAGATAAAGTATTCAAAGTTTAATCCCCCCCCCCATCTAATCGAGCTGTTATTATTATTCTGAGTTTCTTGATTATTTTTATACCATTCATACATCATTTGAATTCCTTTTTCTAAATCAATTTTATGTTTCCAACCTAAAGAATGAATTTTTGAGCAATCTGTAAATTTCTGCATTGCACCATCTGGGCGATTTAAATTAAAAACTAAATTTCCCTTAAATCCTACTATATTTTTGATTAATTCTGCTAATTCTTTAATAGTGATATTCTTATGTGGGCCTATATTTAAATGAGTGTTGATAATCTCAGTATTACCACCTTTTAAATCTTTAAAATCTATATTATTCATGATAAATAAACAAGCATTTGCTAAATCTTGACTATGTAAAAATTCTCTTGTCGGTTTTCCACTACCCCAAATTTCAACATTATTCTCATCTACACCAAATTTTTTTAAATAATTCTTAGCTTCTTCAATGGAATCAAATTTTAAATCATTTAATAAGTCCTCATATCGTTTTTCATTTAAAAGCTTCGCTAAATGCATTTTTCTTAAAATTCCAGGCAATACATGAGATTTTTCAAGATCAAATTTATCGTTATTGCCATATAAATTTGTAGGAGTGATTGCTATAAAATTTGTATTGTATTGCAAATTATAACTTTCACAAAGCATCAAGCCTGAAATTTTAGCAATTGCGTAAGGTTTGTTAGTATACTCAAGATCTCCACTTAACATTTGATCTTCACTAGTTGGTAATGTTGCATTTTTAGGATAAACTGTAGTTGAAGCTATGAAAAGTAGCTTTTTTACTTTATGCAAATAAGCATTATGAATAACATTGCACTCTATCATTAAATTTTGATAAATAAAATCAGCACGATAAGTATTATTAGCTAGAATTCCACCCGCTTTAGCTGCTGCTAAAATAACATATTCTGGCTTTTCTCTCTCAAAAAAATCAGCCGCAGCCTTTTGGTTTGTTAAATCGAGCTCAAAGTGAGTTTTAAAAACAAGATTTTTATAACCTTGTTGCTTAAGTTCATTAAGTATAGCACTGCCCACAAGACCACTATGACCCGCTATGTAAATTTTAGAATCTTTTTGCATCATTTATCCTTGAAATCTTAATGGAATTTCAGGATTAGATGGCCAAACTGGAAAATCTAAATTTTGCAAATTTCCGCATTCTTTTCTGTAATGTAAACCCTGCATTAAATTTAACTCATTTCTTCTTAGATAACTTACTTCTAAGGTAGTGCTAAAAAATAATCCCTTAGAATAAAAAATCTTTCCGTGATTATTTAAATGTGTATGTATTGGAATAAAATATTCATTAAGTTTTTTTAGTAAACTTATTCTTTTTTCAACCCCATCTTGCTCTTCAGGATTACACCCATGAAATTCGAATATAACTTGTGAAAAATATTTATTTAAAATACTTATATCAATATTTTCAAGCATATCCCATTCACAATTTTCAATATCACATTGCAAAATATTTGGCCTACTCTCATCTAAATTATTATCTTTTAAAGCTTGTGCTAAAGTAATTGTATTTTCGTTATTTGTATTGCCTATAAATTTTTTATGAAAAATAATATTTTCATGACTATAAGGACATTTTTCTATGCTAGCATCATATTCAATTACCTCAAATCCTCTTTGAGCCATTTCCAAATCCCAAGGGGAACTGTCTGAAACACCTAAAGAAAGAGCTTTTGCATCAATATTGCTCATACACCCCCCCCCATTATACATTACATAACCACCATCTCCATTACCACCAATTCTTAGTAAATTATACAAAGGCAGTTCCAAAGGTCGAATAAGATTTAAATAATTTACAATATTCCTATAACACTGCTCATTGTTATTTATGCGAATATAATTTCTATCTCTATCTTGTAATAATAGGAATAAAATTTCCTTATCTCTTTTATCAATATCTAAATTTGAAATAATATTTGACATTAAAATTTGATAAGACAATTGATTGCCAACTTTAATATTAACATTTAACTCTTGTAATAATTTTTCCATATTTATCCTTTATTTTTAGTTGCTAAAATATCACGTTCTGAAAGAATAGGAGAATTTGTTGGCCAATCTATACCAATTCTTTCATCATTCCATGCATAAGTAAATTGATCATGTGCATCCATATATTCTCCTAAATAAGCACATTTATAGTAATACACTGCACTTTCACTGCTAACATAATGAGCATTTCCAAAACCTGCTGGAACTAAAATGATTTGCTGATTATCTTGATTTATGATGAATCTTTCATGCTTCAAATAAGTTGGTGAATCTTTTCTGCAATCAACCACAACTTGATGCACTTCTCCATAAACACAAGTGGCAAGCTTATAAGTTTTTACATCGCCATGGATACCGCGGATAACATTATGTTTAGAATGTATGAATTTATCGTGTATAAATTTTAATCCATTTGGTAAAAGCTTATCTACAGCCTTGCTTGTAAAAGCTGTCCAAATTTCACCCCTTAAATCTCTAAATTTGTTAGGAGTTATAATATACACTCCTTTTAAAATTTTTGATTCTTGTATATCAAATTTTATTGCCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP017031|1372196:1382438|1377696_1378728_-|WP_002917288.1|DBSCAN-SWA
MKKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRIGIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGYDPVVHICSSSEVYGKAKVGIKLNEETAFHGASPYSISKIGADYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVVKVGNLSSVRTFQDCRDAIRAYYLLSLESQKGNIPCGEAFNIAGEEAFKLPEVIDILLGFSTRKDIKIEQDEERLRPIDADYQMFDNTKIKNYISWKPEIAARKMFEDLLNHWRDEIKKGRIPLNR
>NZ_CP017031|1372196:1382438|1381892_1382438_-|WP_002889981.1|DBSCAN-SWA
MAIKFDIQESKILKGVYIITPNKFRDLRGEIWTAFTSKAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGDVKTYKLATCVYGEVHQVVVDCRKDSPTYLKHERFIINQDNQQIILVPAGFGNAHYVSSESAVYYYKCAYLGEYMDAHDQFTYAWNDERIGIDWPTNSPILSERDILATKNKG
>NZ_CP017031|1372196:1382438|1379769_1380957_-|WP_079460764.1|DBSCAN-SWA
MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAAADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKVKKLLFIASTTVYPKNATLPTSEDQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRYEDLLNDLKFDSIEEAKNYLKKFGVDENNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKGGNTEIINTHLNIGPHKNITIKELAELIKNIVGFKGNLVFNLNRPDGAMQKFTDCSKIHSLGWKHKIDLEKGIQMMYEWYKNNQETQNNNNSSIRWGGGLNFEYFIFSNIQSFYTNNIYDFANSTKRVCNA
>NZ_CP017031|1372196:1382438|1372196_1373537_+|WP_002917584.1|DBSCAN-SWA
MDKFKNIFLNKVFNKNQEQYALIYEEQKYTYNDLYNNIINKINLLTKLKDINIVGITGDYDFESISLFLACIELNKIIIPFINESEIDNKLAEVNCDILFKNNQYELQKKHCNNHDLIQKLIDDNKPGLILFSSGSTGKPKAMVHNLDKILNAYLNKKSKKLNILLFLMFDHIGGLNTLFNCLSMNACAIAIKERKNIEALAQTIEKYQISLLPASPSLLSLMLVANVIEKYNLSSLKIISYGTEKMPEALLVKLKQTFPKVKFHQTFGTSEVGIAQTKSFGNYFKLENIAYKIINNELFLKSNMQSLGYLNADNSVFTNDGYFATGDLVEVINENGEEYIKIIGRNKEVINVGGEKVLPQEVEGILMQIPFIQDCLVYGQNNPLTGQSVCVKIVLEQNENPANLEAKKEIRLFCKDKLASYKIPTKVEIVQKLEISERFKKIRNS
>NZ_CP017031|1372196:1382438|1376680_1377700_-|WP_002917287.1|DBSCAN-SWA
MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDAKIIFDSPDTNSYSEYESKEFLGDDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFKADFDALAQILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKEQGYVQDFSFTKEGVKSWRI
>NZ_CP017031|1372196:1382438|1380960_1381890_-|WP_002889995.1|DBSCAN-SWA
MEKLLQELNVNIKVGNQLSYQILMSNIISNLDIDKRDKEILFLLLQDRDRNYIRINNNEQCYRNIVNYLNLIRPLELPLYNLLRIGGNGDGGYVMYNGGGCMSNIDAKALSLGVSDSSPWDLEMAQRGFEVIEYDASIEKCPYSHENIIFHKKFIGNTNNENTITLAQALKDNNLDESRPNILQCDIENCEWDMLENIDISILNKYFSQVIFEFHGCNPEEQDGVEKRISLLKKLNEYFIPIHTHLNNHGKIFYSKGLFFSTTLEVSYLRRNELNLMQGLHYRKECGNLQNLDFPVWPSNPEIPLRFQG
>NZ_CP017031|1372196:1382438|1378736_1379777_-|WP_002890912.1|DBSCAN-SWA
MLKDSKIYIAGHGGTLGKTLYNTLIDEGFNNIIVKTRKELDLVDQKAVTDFFAKEKPEYVFLCAAKLDTLGLFTPADVIYENSVLQANIIHSSYQNNVKKLVFYGSAWAYPQKAINPIKEENLLDGKLDLKAIAYGLPKIIGTKMCESYNLQYGTNFITLYLANLYGETTEFDLQKAKVLPALLRKFHLAKLLDENKIDEVLKDLQMNSLEQAMEYLQKFGVSKDSVEIWGGGSVIREFIHAKDLADASIYVMKNIDFKDIVSSNEPHFNVGSGEFLSIKELAFLIKNIVGFKGEIMFNNSKPDSTMDRMLDSSRLQNLGWKAKIKLEDGIKMMYEWYLKEQNIRQ
>NZ_CP017031|1372196:1382438|1375434_1376100_-|WP_002890917.1|DBSCAN-SWA
MQAIILCGGLGTRLKSVIKDIPKPMAPINDKPFLEFIFEYLKKQGIKEVILAVSYKYEVIKEYFKDEFLGIKIKYGIEKEPLGTGGAIKEALKFIKNEVYVLNGDTFFGIDLSKLKLNGSKICLALKQMNDFDRYGTVNVNEQGFVISFEEKIFKKQSLINGGIYLLTKDIFNEFDLEKKFSFEEFLQENCEKLKTRAEIFNDYFIDIGVPSDYERFKNEQ
>NZ_CP017031|1372196:1382438|1376087_1376693_-|WP_002890914.1|DBSCAN-SWA
MENLNSYIKEHFTDSILAKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALSTDTSILTAISNDYGYENLFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGANGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002917584.1|1372196_1373537_+	long-chain fatty acid--CoA ligase	A0A2K9L3I8	Tupanvirus	3.8e-05	25.6
WP_002890917.1|1375434_1376100_-	nucleotidyltransferase family protein	A0A2K9L821	Tupanvirus	2.4e-08	27.2
WP_002890914.1|1376087_1376693_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.8e-15	34.4
WP_002917287.1|1376680_1377700_-	D-glycero-D-manno-heptose 7-phosphate kinase	A0A222YW25	Synechococcus_phage	1.2e-59	41.3
WP_002917288.1|1377696_1378728_-	GDP-mannose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	2.1e-144	72.1
WP_002890912.1|1378736_1379777_-	NAD-dependent epimerase/dehydratase family protein	M1HKX0	Paramecium_bursaria_Chlorella_virus	4.8e-64	40.8
WP_079460764.1|1379769_1380957_-	GDP-L-fucose synthase	D1LW79	Prochlorococcus_phage	1.4e-78	42.9
WP_002889995.1|1380960_1381890_-	FkbM family methyltransferase	NA	NA	NA	NA
WP_002889981.1|1381892_1382438_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	A0A1D7XFA9	Escherichia_phage	1.1e-14	30.2