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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017180 Enterobacter hormaechei subsp. oharae strain DSM 16687 chromosome, complete genome 4 crisprs DEDDh,WYL,DinG,csa3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas3 2 20 10 0

Results visualization

1. NZ_CP017180
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017180_1 1566392-1566781 Unclear I-F
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017180_2 1582095-1582902 TypeI-F I-F
13 spacers
cas1,cas3f,cas8f,cas5f,cas7f,cas6f

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017180_3 1592748-1594280 TypeI-F I-F
25 spacers
cas6f,cas7f,cas5f,cas8f,cas3f,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017180_4 4140259-4140342 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP017180_3 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1592956-1592987 32 NZ_CP017180.1 855510-855541 0 1.0
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP017180.1 4308060-4308091 0 1.0

1. spacer 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to position: 855510-855541, mismatch: 0, identity: 1.0

cgtatggtgaactccggtaccgaagcgaccat	CRISPR spacer
cgtatggtgaactccggtaccgaagcgaccat	Protospacer
********************************

2. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to position: 4308060-4308091, mismatch: 0, identity: 1.0

ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
ccgtaacggcgtggcgcagccgctgcgtctgt	Protospacer
********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017180_2 2.9|1582603|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1582603-1582634 32 NC_016158 Escherichia phage HK639, complete genome 31855-31886 1 0.969
NZ_CP017180_3 3.21|1593980|33|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593980-1594012 33 MT261384 Salmonella virus PAT1, complete genome 35852-35884 1 0.97
NZ_CP017180_3 3.21|1593980|33|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593980-1594012 33 MT580116 Salmonella phage 65FD, complete genome 7131-7163 1 0.97
NZ_CP017180_3 3.21|1593980|33|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593980-1594012 33 MT580117 Salmonella phage 66FD, complete genome 39170-39202 1 0.97
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 MK972693 Salmonella phage SI23, complete genome 6397-6428 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 MK770415 Salmonella phage SF11, complete genome 15201-15232 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 MK972694 Salmonella phage SE22, complete genome 27485-27516 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 MK770414 Salmonella phage SE16, complete genome 19097-19128 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 NC_013059 Salmonella phage c341, complete genome 37505-37536 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 MK972686 Salmonella phage SF3, complete genome 38551-38582 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 MK972685 Salmonella phage SE10, complete genome 39770-39801 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 MK972687 Salmonella phage SE1 (in:P22virus), complete genome 30044-30075 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 FJ000341 Salmonella phage g341c, complete genome 37505-37536 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 EU570103 Salmonella phage epsilon34, complete genome 39546-39577 2 0.938
NZ_CP017180_1 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT 1566722-1566753 32 MK972692 Salmonella phage SE21, complete genome 26621-26652 2 0.938
NZ_CP017180_2 2.9|1582603|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1582603-1582634 32 KY271396 Klebsiella phage 2 LV-2017, complete genome 37170-37201 2 0.938
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 MN856003 Bacteriophage sp. isolate 1, complete genome 13987-14018 3 0.906
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 MN602881 Erwinia phage Midgardsormr38, complete genome 9160-9191 4 0.875
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP050847 Klebsiella pneumoniae strain Bckp206 plasmid pBckp206-2, complete sequence 51053-51084 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 MN543579 Klebsiella pneumoniae strain PM48 plasmid pPM48_140, complete sequence 10002-10033 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 MN543581 Klebsiella pneumoniae strain PM48TC plasmid pPM48TC_fusion, complete sequence 10002-10033 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 MN543585 Klebsiella pneumoniae strain GH27TC plasmid pGH27TC_fusion, complete sequence 10000-10031 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 MN543571 Klebsiella pneumoniae strain GH27 plasmid pGH27_175, complete sequence 9999-10030 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP031799 Klebsiella pneumoniae strain QMP B2-170 plasmid unnamed, complete sequence 88947-88978 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 LR134207 Klebsiella aerogenes strain NCTC9667 genome assembly, plasmid: 2 120192-120223 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP044036 Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed2, complete sequence 94163-94194 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP015026 Klebsiella pneumoniae strain Kpn223 plasmid pKPN-065, complete sequence 15251-15282 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP034681 Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence 191480-191511 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP026154 Klebsiella pneumoniae strain F10(AN) plasmid pF10AN_1, complete sequence 119367-119398 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP023917 Klebsiella pneumoniae strain FDAARGOS_439 plasmid unnamed1, complete sequence 47364-47395 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 CP052535 Klebsiella pneumoniae strain B16KP0157 plasmid pB16KP0157-2, complete sequence 71323-71354 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP050827 Klebsiella pneumoniae strain Bckp212 plasmid pBckp212-1, complete sequence 5550-5581 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP033758 Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed2 9482-9513 5 0.844
NZ_CP017180_2 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT 1582843-1582874 32 NZ_CP033758 Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed2 214376-214407 5 0.844
NZ_CP017180_1 1.3|1566542|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566542-1566573 32 AP019415 Pseudomonas phage HU1 HU1 DNA, complete genome 10263-10294 7 0.781
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NZ_CP032695 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence 2532850-2532881 7 0.781
NZ_CP017180_2 2.1|1582123|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1582123-1582154 32 MT498037 Streptomyces phage Dryad, complete genome 64754-64785 7 0.781
NZ_CP017180_3 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1592956-1592987 32 NZ_CP021653 Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence 805972-806003 7 0.781
NZ_CP017180_3 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1592956-1592987 32 NZ_CP021767 Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence 805970-806001 7 0.781
NZ_CP017180_3 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1592956-1592987 32 NZ_CP012688 Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence 805979-806010 7 0.781
NZ_CP017180_3 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1592956-1592987 32 CP047139 Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence 822035-822066 7 0.781
NZ_CP017180_3 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1592956-1592987 32 CP047137 Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence 785339-785370 7 0.781
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP011515 Mitsuaria sp. 7 plasmid, complete sequence 99831-99862 7 0.781
NZ_CP017180_3 3.14|1593558|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593558-1593589 32 NZ_CP026928 Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence 156222-156253 7 0.781
NZ_CP017180_3 3.17|1593740|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593740-1593771 32 NC_023136 Leisingera methylohalidivorans DSM 14336 plasmid unnamed, complete sequence 53877-53908 7 0.781
NZ_CP017180_3 3.19|1593860|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593860-1593891 32 NZ_CP023549 Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence 767962-767993 7 0.781
NZ_CP017180_3 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593920-1593951 32 NZ_CP010410 Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence 222766-222797 7 0.781
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NC_010625 Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence 517025-517056 8 0.75
NZ_CP017180_2 2.5|1582363|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1582363-1582394 32 MK686071 Streptomyces phage Mischief19, complete genome 24575-24606 8 0.75
NZ_CP017180_3 3.2|1592836|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1592836-1592867 32 NC_048139 Streptomyces phage Hiyaa, complete genome 72525-72556 8 0.75
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 217555-217586 8 0.75
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP030772 Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence 373355-373386 8 0.75
NZ_CP017180_3 3.9|1593256|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593256-1593287 32 NZ_CP017255 Clostridium taeniosporum strain 1/k plasmid pCt2, complete sequence 43670-43701 8 0.75
NZ_CP017180_3 3.22|1594041|32|NZ_CP017180|CRISPRCasFinder,CRT 1594041-1594072 32 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 1816330-1816361 8 0.75
NZ_CP017180_3 3.22|1594041|32|NZ_CP017180|CRISPRCasFinder,CRT 1594041-1594072 32 NZ_CP023071 Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence 281165-281196 8 0.75
NZ_CP017180_1 1.3|1566542|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566542-1566573 32 NC_013856 Azospirillum sp. B510 plasmid pAB510b, complete sequence 538759-538790 9 0.719
NZ_CP017180_1 1.3|1566542|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566542-1566573 32 NZ_CP016463 Bosea sp. RAC05 plasmid pBSY19_1, complete sequence 115461-115492 9 0.719
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NZ_CP026091 Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence 1079424-1079455 9 0.719
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NZ_CP026093 Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence 1079541-1079572 9 0.719
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NZ_CP012940 Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence 575892-575923 9 0.719
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NZ_CP012944 Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence 1318554-1318585 9 0.719
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NC_017575 Ralstonia solanacearum Po82 megaplasmid, complete sequence 1079266-1079297 9 0.719
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NZ_CP026308 Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence 1079212-1079243 9 0.719
NZ_CP017180_1 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1566662-1566693 32 NZ_CP051295 Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence 567856-567887 9 0.719
NZ_CP017180_2 2.4|1582303|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1582303-1582334 32 MN694332 Marine virus AFVG_250M646, complete genome 25522-25553 9 0.719
NZ_CP017180_2 2.4|1582303|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1582303-1582334 32 NC_029057 Vibrio phage qdvp001, partial genome 30166-30197 9 0.719
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP012940 Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence 956835-956866 9 0.719
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP012944 Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence 886140-886171 9 0.719
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NC_017575 Ralstonia solanacearum Po82 megaplasmid, complete sequence 1460250-1460281 9 0.719
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP026308 Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence 1460194-1460225 9 0.719
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP051295 Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence 947809-947840 9 0.719
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 2254070-2254101 9 0.719
NZ_CP017180_3 3.9|1593256|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593256-1593287 32 NZ_CP038620 Arsenophonus nasoniae strain FIN plasmid pArsFIN8, complete sequence 43118-43149 9 0.719
NZ_CP017180_3 3.9|1593256|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593256-1593287 32 NZ_CP009317 Bacillus cereus 03BB102 plasmid unnamed, complete sequence 104055-104086 9 0.719
NZ_CP017180_3 3.9|1593256|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593256-1593287 32 NC_012473 Bacillus cereus 03BB102 plasmid p03BB102_179, complete sequence 32837-32868 9 0.719
NZ_CP017180_3 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593920-1593951 32 NC_014309 Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome 110277-110308 9 0.719
NZ_CP017180_3 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593920-1593951 32 NZ_CP012185 Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence 648685-648716 9 0.719
NZ_CP017180_3 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593920-1593951 32 NZ_CP012182 Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence 399858-399889 9 0.719
NZ_CP017180_2 2.4|1582303|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1582303-1582334 32 NC_019401 Cronobacter phage vB_CsaM_GAP32, complete genome 254536-254567 10 0.688
NZ_CP017180_3 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593016-1593047 32 NZ_CP046053 Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence 75176-75207 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 KY290956 Aeromonas phage L9-6, complete genome 102937-102968 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 KY290951 Aeromonas phage 31.2, complete genome 102338-102369 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 NC_005135 Aeromonas phage 44RR2.8t, complete genome 102579-102610 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 AY962392 Aeromonas phage 31, complete genome 102341-102372 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 KY290958 Aeromonas phage SW69-9, complete genome 102473-102504 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 AY375531 Bacteriophage 44RR2.8t, complete genome 102579-102610 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 KY290948 Aeromonas phage 44RR2.8t.2, complete genome 102579-102610 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 KY290957 Aeromonas phage Riv-10, complete genome 103674-103705 10 0.688
NZ_CP017180_3 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593920-1593951 32 NZ_CP014598 Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence 105622-105653 10 0.688
NZ_CP017180_3 3.24|1594161|32|NZ_CP017180|CRISPRCasFinder,CRT 1594161-1594192 32 NZ_CP017191 Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_1, complete sequence 23848-23879 10 0.688
NZ_CP017180_3 3.24|1594161|32|NZ_CP017180|CRISPRCasFinder,CRT 1594161-1594192 32 NZ_CP018463 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.2, complete sequence 96386-96417 10 0.688
NZ_CP017180_3 3.24|1594161|32|NZ_CP017180|CRISPRCasFinder,CRT 1594161-1594192 32 NC_007507 Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183, complete sequence 39083-39114 10 0.688
NZ_CP017180_3 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT 1593076-1593107 32 NZ_CP039706 Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence 738229-738260 11 0.656
NZ_CP017180_3 3.22|1594041|32|NZ_CP017180|CRISPRCasFinder,CRT 1594041-1594072 32 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 1797372-1797403 11 0.656

1. spacer 2.9|1582603|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 1, identity: 0.969

tgggcgtaagcaactgctgaaatgaaatcgtt	CRISPR spacer
tgggcgtaagcaactgccgaaatgaaatcgtt	Protospacer
*****************.**************

2. spacer 3.21|1593980|33|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to MT261384 (Salmonella virus PAT1, complete genome) position: , mismatch: 1, identity: 0.97

agccgcctgtttaccagtgatgaagatgcgttc	CRISPR spacer
agtcgcctgtttaccagtgatgaagatgcgttc	Protospacer
**.******************************

3. spacer 3.21|1593980|33|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to MT580116 (Salmonella phage 65FD, complete genome) position: , mismatch: 1, identity: 0.97

agccgcctgtttaccagtgatgaagatgcgttc	CRISPR spacer
agtcgcctgtttaccagtgatgaagatgcgttc	Protospacer
**.******************************

4. spacer 3.21|1593980|33|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to MT580117 (Salmonella phage 66FD, complete genome) position: , mismatch: 1, identity: 0.97

agccgcctgtttaccagtgatgaagatgcgttc	CRISPR spacer
agtcgcctgtttaccagtgatgaagatgcgttc	Protospacer
**.******************************

5. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

6. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

7. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

8. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

9. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NC_013059 (Salmonella phage c341, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

10. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

11. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

12. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

13. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to FJ000341 (Salmonella phage g341c, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

14. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to EU570103 (Salmonella phage epsilon34, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

15. spacer 1.6|1566722|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 2, identity: 0.938

tcttgcctgatttgctcatgcctttagtcacg	CRISPR spacer
tcctgcctgatttgctcatgccattagtcacg	Protospacer
**.******************* *********

16. spacer 2.9|1582603|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to KY271396 (Klebsiella phage 2 LV-2017, complete genome) position: , mismatch: 2, identity: 0.938

tgggcgtaagcaactgctgaaatgaaatcgtt	CRISPR spacer
tgggcgtaagctactgccgaaatgaaatcgtt	Protospacer
*********** *****.**************

17. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 3, identity: 0.906

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
atgagctttgaaggtgaggtgcgcaagaagga	Protospacer
 *************.**.**************

18. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to MN602881 (Erwinia phage Midgardsormr38, complete genome) position: , mismatch: 4, identity: 0.875

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
atcagctttgaaggcgaagtgcgtaagaaaga	Protospacer
 * ********************.*****.**

19. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP050847 (Klebsiella pneumoniae strain Bckp206 plasmid pBckp206-2, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

20. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MN543579 (Klebsiella pneumoniae strain PM48 plasmid pPM48_140, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

21. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MN543581 (Klebsiella pneumoniae strain PM48TC plasmid pPM48TC_fusion, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

22. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MN543585 (Klebsiella pneumoniae strain GH27TC plasmid pGH27TC_fusion, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

23. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to MN543571 (Klebsiella pneumoniae strain GH27 plasmid pGH27_175, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

24. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP031799 (Klebsiella pneumoniae strain QMP B2-170 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

25. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to LR134207 (Klebsiella aerogenes strain NCTC9667 genome assembly, plasmid: 2) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

26. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP044036 (Klebsiella pneumoniae strain FDAARGOS_630 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

27. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP015026 (Klebsiella pneumoniae strain Kpn223 plasmid pKPN-065, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

28. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP034681 (Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

29. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP026154 (Klebsiella pneumoniae strain F10(AN) plasmid pF10AN_1, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

30. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP023917 (Klebsiella pneumoniae strain FDAARGOS_439 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

31. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to CP052535 (Klebsiella pneumoniae strain B16KP0157 plasmid pB16KP0157-2, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

32. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP050827 (Klebsiella pneumoniae strain Bckp212 plasmid pBckp212-1, complete sequence) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

33. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP033758 (Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

34. spacer 2.13|1582843|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP033758 (Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

tggaaattgacagccgggaaattgagatcaca	CRISPR spacer
tggaaattgactgccgggaaattgaacccaaa	Protospacer
*********** *************. .** *

35. spacer 1.3|1566542|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to AP019415 (Pseudomonas phage HU1 HU1 DNA, complete genome) position: , mismatch: 7, identity: 0.781

ggaaccg----caaacagagaagcgccaccgccgac	CRISPR spacer
----ccgccgccaaacatagaagcaccaccgccgcc	Protospacer
    ***    ****** ******.********* *

36. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 7, identity: 0.781

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
ctcggcgaggaaggcgcagtgcgcaacaagga	Protospacer
** .**   ******* ********* *****

37. spacer 2.1|1582123|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to MT498037 (Streptomyces phage Dryad, complete genome) position: , mismatch: 7, identity: 0.781

ttctggcgtgtccggcgtaggccgtccggtca	CRISPR spacer
agagggcgagtccggcgtaggccatccggtcc	Protospacer
    **** **************.******* 

38. spacer 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgtatggtg-aactccggtaccgaagcgaccat	CRISPR spacer
-gcgttctgcaattccggtaccgaagcgatcat	Protospacer
 *..*  ** **.****************.***

39. spacer 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgtatggtg-aactccggtaccgaagcgaccat	CRISPR spacer
-gcgttctgcaattccggtaccgaagcgatcat	Protospacer
 *..*  ** **.****************.***

40. spacer 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgtatggtg-aactccggtaccgaagcgaccat	CRISPR spacer
-gcgttctgcaattccggtaccgaagcgatcat	Protospacer
 *..*  ** **.****************.***

41. spacer 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgtatggtg-aactccggtaccgaagcgaccat	CRISPR spacer
-gcgttctgcaattccggtaccgaagcgatcat	Protospacer
 *..*  ** **.****************.***

42. spacer 3.4|1592956|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgtatggtg-aactccggtaccgaagcgaccat	CRISPR spacer
-gcgttctgcaattccggtaccgaagcgatcat	Protospacer
 *..*  ** **.****************.***

43. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

-ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
cctgctgc-gcctggcgcagccgctgcgtccgt	Protospacer
 *.*. .* ** ******************.**

44. spacer 3.14|1593558|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 7, identity: 0.781

aatcaacgtgaactttcatggcgcagaactgt	CRISPR spacer
aatcaacgggatctttcatggcgcacctctca	Protospacer
******** ** *************   **  

45. spacer 3.17|1593740|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_023136 (Leisingera methylohalidivorans DSM 14336 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ttcattgtgatcatgccaatcggtgtatggtt	CRISPR spacer
ttcatggtgatcatgccaagcgggatccggtc	Protospacer
***** ************* *** .* .***.

46. spacer 3.19|1593860|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agcatcattccgcggcgtgccgttcaaagtct	CRISPR spacer
tgcaccggcccgcggcgtgccgttctacgtct	Protospacer
 ***.*. .**************** * ****

47. spacer 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cgcgtgctggtgcagaacgaca--gcgatatcca	CRISPR spacer
ggcgtgctggtgcaggacgacaccgtgctgtc--	Protospacer
 **************.******  *.* *.**  

48. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 8, identity: 0.75

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
ttcgggtttgatgtcgaagtgcgcaagaatgg	Protospacer
.* .* ***** * *************** *.

49. spacer 2.5|1582363|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to MK686071 (Streptomyces phage Mischief19, complete genome) position: , mismatch: 8, identity: 0.75

ggctcgtcgctgacttctttgtcccatacagg-	CRISPR spacer
tcctcgtcgctgacgtcgttgtccca-atggtc	Protospacer
  ************ ** ******** *..*  

50. spacer 3.2|1592836|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_048139 (Streptomyces phage Hiyaa, complete genome) position: , mismatch: 8, identity: 0.75

gatgacggcacgacggtcgcgatgtttttata	CRISPR spacer
caggtgggcacgaaggtcgcgatgttcttcga	Protospacer
 * *  ******* ************.**  *

51. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

----ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
ggcgctg----gccgtggcgcagacgctgcgcctgt	Protospacer
    *.*    * ********** *******.****

52. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 8, identity: 0.75

ccgtaacggcgtggcgcagccgct-gcgtctgt	CRISPR spacer
gggtaagggtgtggcgcagccgctggcgcgcg-	Protospacer
  **** **.************** ***. .* 

53. spacer 3.9|1593256|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017255 (Clostridium taeniosporum strain 1/k plasmid pCt2, complete sequence) position: , mismatch: 8, identity: 0.75

agaaacgctattaaagggaaaaatattcatac	CRISPR spacer
atgaaagttattaaagggaaaaatatcaatta	Protospacer
* .** *.******************. **  

54. spacer 3.22|1594041|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

-tcgttgcgggttgatcagcatgtcgtcgattg	CRISPR spacer
atcgacat-cgttcatcagcacgtcgtcgattg	Protospacer
 *** ...  *** *******.***********

55. spacer 3.22|1594041|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.75

-tcgttgcgggttgatcagcatgtcgtcgattg	CRISPR spacer
atcgacat-cgttcatcagcacgtcgtcgattg	Protospacer
 *** ...  *** *******.***********

56. spacer 1.3|1566542|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaccgcaaacagagaagcgccaccgccgac	CRISPR spacer
gacgccgcaaaccgagaagctccaccgcttcg	Protospacer
*. .******** ******* *******.   

57. spacer 1.3|1566542|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaccgcaaacagagaagcgccaccgccgac	CRISPR spacer
acgtccttgaacagggcagcgccaccgccgac	Protospacer
. . ** ..*****.* ***************

58. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
cccggctgtgaagccgaagtgcgcaagctcca	Protospacer
*. .*** ***** *************    *

59. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
cccggctgtgaagccgaagtgcgcaagctcca	Protospacer
*. .*** ***** *************    *

60. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
cccggctgtgaagccgaagtgcgcaagctcca	Protospacer
*. .*** ***** *************    *

61. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
cccggctgtgaagccgaagtgcgcaagctcca	Protospacer
*. .*** ***** *************    *

62. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
cccggctgtgaagccgaagtgcgcaagctcca	Protospacer
*. .*** ***** *************    *

63. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
cccggctgtgaagccgaagtgcgcaagctcca	Protospacer
*. .*** ***** *************    *

64. spacer 1.5|1566662|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctttgaaggcgaagtgcgcaagaagga	CRISPR spacer
cccggctgtgaagccgaagtgcgcaagctcca	Protospacer
*. .*** ***** *************    *

65. spacer 2.4|1582303|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to MN694332 (Marine virus AFVG_250M646, complete genome) position: , mismatch: 9, identity: 0.719

aggctcatcaactttattcgttgcctgggtca	CRISPR spacer
tgctgaataaactttattcgttgccggggttc	Protospacer
 * .  ** **************** ****. 

66. spacer 2.4|1582303|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_029057 (Vibrio phage qdvp001, partial genome) position: , mismatch: 9, identity: 0.719

aggctcatcaactttattcgttgcctgggtca	CRISPR spacer
ccattcattaactttattcgttccctgcatta	Protospacer
  ..****.************* **** .*.*

67. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
tgttgccggcgtcgcgcagccgctgcatcgct	Protospacer
.  *. ****** *************.**  *

68. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
tgttgccggcgtcgcgcagccgctgcatcgct	Protospacer
.  *. ****** *************.**  *

69. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
tgttgccggcgtcgcgcagccgctgcatcgct	Protospacer
.  *. ****** *************.**  *

70. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
tgttgccggcgtcgcgcagccgctgcatcgct	Protospacer
.  *. ****** *************.**  *

71. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
tgttgccggcgtcgcgcagccgctgcatcgct	Protospacer
.  *. ****** *************.**  *

72. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
catccacggcgtggcgcagccccagcgtatag	Protospacer
*  . **************** * **** *. 

73. spacer 3.9|1593256|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038620 (Arsenophonus nasoniae strain FIN plasmid pArsFIN8, complete sequence) position: , mismatch: 9, identity: 0.719

agaaacgctattaaagggaaaaatattcatac	CRISPR spacer
aaaaacgcttctaaagggaaaaataacaacca	Protospacer
*.******* .************** . *.  

74. spacer 3.9|1593256|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009317 (Bacillus cereus 03BB102 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

agaaacgctattaaagggaaaaatattcatac	CRISPR spacer
ttaacaactatgaaagggaaaaatatccatga	Protospacer
  **  .**** **************.***. 

75. spacer 3.9|1593256|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_012473 (Bacillus cereus 03BB102 plasmid p03BB102_179, complete sequence) position: , mismatch: 9, identity: 0.719

agaaacgctattaaagggaaaaatattcatac	CRISPR spacer
ttaacaactatgaaagggaaaaatatccatga	Protospacer
  **  .**** **************.***. 

76. spacer 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 9, identity: 0.719

cgcgtgctggtgcagaacgacagcgatatcca	CRISPR spacer
gcggtgctggtgcagaacgtcatcgatggcgt	Protospacer
   **************** ** ****. *  

77. spacer 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgtgctggtgcagaacgacagcgatatcca	CRISPR spacer
tgcgtgctggtgccgaacgactgcaagggata	Protospacer
.************ ******* **.* .  .*

78. spacer 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgtgctggtgcagaacgacagcgatatcca	CRISPR spacer
tgcgtgctggtgccgaacgactgcaagggata	Protospacer
.************ ******* **.* .  .*

79. spacer 2.4|1582303|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_019401 (Cronobacter phage vB_CsaM_GAP32, complete genome) position: , mismatch: 10, identity: 0.688

aggctcatcaactttattcgttgcctgggtca	CRISPR spacer
ttcatcatcaacttttttcgatgcctgatttt	Protospacer
    *********** **** ******. *. 

80. spacer 3.5|1593016|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046053 (Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ccgtaacggcgtggcgcagccgctgcgtctgt	CRISPR spacer
acacggcggcgaggcgcagccgctgcttcacc	Protospacer
 *....***** ************** **  .

81. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to KY290956 (Aeromonas phage L9-6, complete genome) position: , mismatch: 10, identity: 0.688

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
ctgtcaaaattgaagctgttatggccgatgcg	Protospacer
 ** **************** ***  ..  .*

82. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to KY290951 (Aeromonas phage 31.2, complete genome) position: , mismatch: 10, identity: 0.688

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
ctgtcaaaattgaagctgttatggccgatgcg	Protospacer
 ** **************** ***  ..  .*

83. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NC_005135 (Aeromonas phage 44RR2.8t, complete genome) position: , mismatch: 10, identity: 0.688

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
ctgtcaaaattgaagctgttatggccgatgcg	Protospacer
 ** **************** ***  ..  .*

84. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to AY962392 (Aeromonas phage 31, complete genome) position: , mismatch: 10, identity: 0.688

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
ctgtcaaaattgaagctgttatggccgatgcg	Protospacer
 ** **************** ***  ..  .*

85. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to KY290958 (Aeromonas phage SW69-9, complete genome) position: , mismatch: 10, identity: 0.688

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
ctgtcaaaattgaagctgttatggccgatgcg	Protospacer
 ** **************** ***  ..  .*

86. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to AY375531 (Bacteriophage 44RR2.8t, complete genome) position: , mismatch: 10, identity: 0.688

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
ctgtcaaaattgaagctgttatggccgatgcg	Protospacer
 ** **************** ***  ..  .*

87. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to KY290948 (Aeromonas phage 44RR2.8t.2, complete genome) position: , mismatch: 10, identity: 0.688

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
ctgtcaaaattgaagctgttatggccgatgcg	Protospacer
 ** **************** ***  ..  .*

88. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to KY290957 (Aeromonas phage Riv-10, complete genome) position: , mismatch: 10, identity: 0.688

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
ctgtcaaaattgaagctgttatggccgatgcg	Protospacer
 ** **************** ***  ..  .*

89. spacer 3.20|1593920|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014598 (Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cgcgtgctggtgcagaacgacagcgatatcca	CRISPR spacer
accgtgctgtcgcagaacgacagcggcgtggg	Protospacer
  ******* .**************...*  .

90. spacer 3.24|1594161|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP017191 (Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttgctgatcaccctcccgttgtcacccgg	CRISPR spacer
agatacctggtcacccacccgttgtcaccgac	Protospacer
  .*  ***.****** ************ . 

91. spacer 3.24|1594161|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP018463 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.2, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttgctgatcaccctcccgttgtcacccgg	CRISPR spacer
agatacctggtcacccacccgttgtcaccgac	Protospacer
  .*  ***.****** ************ . 

92. spacer 3.24|1594161|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NC_007507 (Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttgctgatcaccctcccgttgtcacccgg	CRISPR spacer
agatacctggtcacccacccgttgtcaccgac	Protospacer
  .*  ***.****** ************ . 

93. spacer 3.6|1593076|32|NZ_CP017180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 11, identity: 0.656

atgacaaaattgaagctgttttggaaaggctg	CRISPR spacer
gaagttctattgaagctgttttggacaagcta	Protospacer
. ...   ***************** *.***.

94. spacer 3.22|1594041|32|NZ_CP017180|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

tcgttgcgggttgatcagcatgtcgtcgattg	CRISPR spacer
cacttgcgggttgatcagcgtttcgtacggca	Protospacer
.  ****************.* ****  . ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 104849 : 118690 15 Enterobacteria_phage(72.73%) integrase,transposase,capsid attL 106946:106966|attR 118851:118871
DBSCAN-SWA_2 1143686 : 1190941 68 Enterobacteria_phage(29.09%) transposase,terminase,head,tail,holin NA
DBSCAN-SWA_3 1839845 : 1847199 7 Shigella_phage(33.33%) NA NA
DBSCAN-SWA_4 2019269 : 2075604 81 Escherichia_phage(41.79%) terminase,coat,tail,holin NA
DBSCAN-SWA_5 2512567 : 2521454 8 Tupanvirus(28.57%) NA NA
DBSCAN-SWA_6 2953574 : 2989052 30 Escherichia_phage(33.33%) plate,transposase,integrase,tRNA attL 2943687:2943703|attR 2992479:2992495
DBSCAN-SWA_7 3274414 : 3283723 9 Enterobacterial_phage(16.67%) transposase NA
DBSCAN-SWA_8 3313720 : 3419017 125 Escherichia_phage(38.89%) transposase,terminase,integrase,tail,holin,coat,protease attL 3327386:3327403|attR 3421028:3421045
DBSCAN-SWA_9 3466350 : 3475557 10 Enterobacteria_phage(83.33%) integrase attL 3459093:3459107|attR 3479463:3479477
DBSCAN-SWA_10 4116448 : 4193111 72 uncultured_Caudovirales_phage(59.09%) capsid,terminase,integrase,head,tail,protease,tRNA,portal attL 4165585:4165601|attR 4194416:4194432
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage