CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017181	Enterobacter kobei strain DSM 13645 chromosome, complete genome	3 crisprs	csa3,WYL,DEDDh,DinG,cas3,RT	2	7	13	2
NZ_CP017182	Enterobacter kobei strain DSM 13645 plasmid pDSMZ13645, complete sequence	0 crisprs	NA	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017181_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017181_1

1504020-1505131

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRT

18 spacers

The CRISPR arrays of NZ_CP017181_1

>merge|NZ_CP017181|1|1504020-1505131|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGTACAGGCAGCTTAGAAATGTTCCGACACTGCGTTACCCGTCAGCTGCGCCGTTCACTGCTGTACAGGCAGCTTAGAAATGCAAAAATCCGCCACGTAATCAAGACTCGACGTTCACTGCCGTACAGGCAGCTTAGAAAGTTGGCAGTGGGTTCACTCTCACAACGCCTGAGTTCACTGCCGTACAGGCAGCTTAGAAATGATGGTTGGTTATGCACGAGAAAAGGGAACGAGTTCACTGCCGTACAGGCAGCTTAGAAATGCACTAACTGATTGATGCGAGGGTAGTTGTAGTTCACTGCCGTACAGGCAGCTTAGAAAAGTCATTTCAACGGGGCCATATCAAAACGTGAGTTCACTGCCGTACAGGCAGCTTAGAAAGTGCACGTTCGTGTTCAACCCGCAGATAGCGTCGTTCACTGCCGTACAGGCAGCTTAGAAAAGGAAACCCTTCTGATCCATGAGAACGAATGGGTTCACTGCCGTACAGGCAGCTTAGAAACTACACTTCGGGTTACGATCAGCCATTTCAACTGTTCACTGCCGTACAGGCAGCTTAGAAAGTCGCTATGAGCTGCACCGGCTCAACAAAAACGTTCACTGCCGTACAGGCAGCTTAGAAAAGAATCCCGGAGGACGGGATGGTGTTAAAACTGTGCACTGCCGTACAGGCAGCTTAGAAATCTTCAGGCATGTTGCAAATATGAACGCGATCGTGCACTGCCGTACAGGCAGCTTAGAAAAATCACGATAGTCCGGAGTATCGAAACTCTCAGTTCACTGCCGTACAGGCAGCTTAGAAATCTTTAATCCGAGCCTCAAGGACATCGTTTGTGTTCACTGCCGTACAGGCAGCTTAGAAAGAAAACCTCCTGCACGGAGGCGCGAAAACAGATTTCATTGCCGTACAGGCAGCTTAGAAAAGTCCGACACTGTGTTTCCGTCTGTTCAGTACGTTCACTGCCGTACAGGCAGCTTAGAAAACAATCTGAACTCCTTACCTTGTCACAGATGCGCTTAGTGCAATACAGGCAGCTTATAAAGTCGCGGAATACAACGACGCCATCTATCAATAGTTCACTGCCGTACACGCAGCAACCATA

>NZ_CP017181|1|1|1504020-1504951|PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTTCCGACACTGCGTTACCCGTCAGCTGCGCC
GTTCACTGCTGTACAGGCAGCTTAGAAA	TGCAAAAATCCGCCACGTAATCAAGACTCGAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTGGCAGTGGGTTCACTCTCACAACGCCTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGATGGTTGGTTATGCACGAGAAAAGGGAACGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCACTAACTGATTGATGCGAGGGTAGTTGTA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTCATTTCAACGGGGCCATATCAAAACGTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTGCACGTTCGTGTTCAACCCGCAGATAGCGTC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGGAAACCCTTCTGATCCATGAGAACGAATGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTACACTTCGGGTTACGATCAGCCATTTCAACT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTCGCTATGAGCTGCACCGGCTCAACAAAAAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAATCCCGGAGGACGGGATGGTGTTAAAACT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCTTCAGGCATGTTGCAAATATGAACGCGATC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AATCACGATAGTCCGGAGTATCGAAACTCTCA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCTTTAATCCGAGCCTCAAGGACATCGTTTGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GAAAACCTCCTGCACGGAGGCGCGAAAACAGA
TTTCATTGCCGTACAGGCAGCTTAGAAA

>NZ_CP017181|1|1|1504020-1505131|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTTCCGACACTGCGTTACCCGTCAGCTGCGCC
GTTCACTGCTGTACAGGCAGCTTAGAAA	TGCAAAAATCCGCCACGTAATCAAGACTCGAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTGGCAGTGGGTTCACTCTCACAACGCCTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGATGGTTGGTTATGCACGAGAAAAGGGAACGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCACTAACTGATTGATGCGAGGGTAGTTGTA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTCATTTCAACGGGGCCATATCAAAACGTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTGCACGTTCGTGTTCAACCCGCAGATAGCGTC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGGAAACCCTTCTGATCCATGAGAACGAATGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTACACTTCGGGTTACGATCAGCCATTTCAACT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTCGCTATGAGCTGCACCGGCTCAACAAAAAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAATCCCGGAGGACGGGATGGTGTTAAAACT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCTTCAGGCATGTTGCAAATATGAACGCGATC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AATCACGATAGTCCGGAGTATCGAAACTCTCA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCTTTAATCCGAGCCTCAAGGACATCGTTTGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GAAAACCTCCTGCACGGAGGCGCGAAAACAGA
TTTCATTGCCGTACAGGCAGCTTAGAAA	AGTCCGACACTGTGTTTCCGTCTGTTCAGTAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACAATCTGAACTCCTTACCTTGTCACAGATGC
GCTTAGTGCAATACAGGCAGCTTATAAA	GTCGCGGAATACAACGACGCCATCTATCAATA
GTTCACTGCCGTACACGCAGCAACCATA

>NZ_CP017181|1|1|1504020-1505071|CRT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTTCCGACACTGCGTTACCCGTCAGCTGCGCC
GTTCACTGCTGTACAGGCAGCTTAGAAA	TGCAAAAATCCGCCACGTAATCAAGACTCGAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTTGGCAGTGGGTTCACTCTCACAACGCCTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGATGGTTGGTTATGCACGAGAAAAGGGAACGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCACTAACTGATTGATGCGAGGGTAGTTGTA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTCATTTCAACGGGGCCATATCAAAACGTGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTGCACGTTCGTGTTCAACCCGCAGATAGCGTC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGGAAACCCTTCTGATCCATGAGAACGAATGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTACACTTCGGGTTACGATCAGCCATTTCAACT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTCGCTATGAGCTGCACCGGCTCAACAAAAAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAATCCCGGAGGACGGGATGGTGTTAAAACT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCTTCAGGCATGTTGCAAATATGAACGCGATC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AATCACGATAGTCCGGAGTATCGAAACTCTCA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCTTTAATCCGAGCCTCAAGGACATCGTTTGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GAAAACCTCCTGCACGGAGGCGCGAAAACAGA
TTTCATTGCCGTACAGGCAGCTTAGAAA	AGTCCGACACTGTGTTTCCGTCTGTTCAGTAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACAATCTGAACTCCTTACCTTGTCACAGATGC
GCTTAGTGCAATACAGGCAGCTTATAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017181.1\|WP_014883191.1\|1506251_1507904_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP017181.1\|WP_014883167.1\|1487984_1488608_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374267
NZ_CP017181.1\|WP_069601856.1\|1515997_1516219_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP017181.1\|WP_023332524.1\|1503419_1503854_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|311556
NZ_CP017181.1\|WP_069601854.1\|1510103_1511762_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP017181.1\|WP_059372788.1\|1499059_1500499_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187556
NZ_CP017181.1\|WP_023332526.1\|1508048_1508948_-\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP017181.1\|WP_023336997.1\|1497956_1498970_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP017181.1\|WP_045134882.1\|1495448_1495889_+\|type-III-secretion-system-invasion-protein-IagB	unknown	unknown	gnl\|CDD\|185228
NZ_CP017181.1\|WP_045134888.1\|1489246_1490812_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|225806
NZ_CP017181.1\|WP_006174393.1\|1516486_1516807_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP017181.1\|WP_023332510.1\|1488608_1489247_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_014883196.1\|1512874_1513990_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP017181.1\|WP_069601855.1\|1513986_1515927_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP017181.1\|WP_023332528.1\|1511758_1512715_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|377343
NZ_CP017181.1\|WP_023332523.1\|1501549_1503268_-\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP017181.1\|WP_069601853.1\|1496022_1497852_+\|chitinase	unknown	unknown	gnl\|CDD\|381595
NZ_CP017181.1\|WP_023337002.1\|1505272_1506241_-\|NADH-oxidoreductase	unknown	unknown	gnl\|CDD\|236735
NZ_CP017181.1\|WP_014883193.1\|1509118_1509814_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP017181.1\|WP_045268543.1\|1500509_1501511_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|236710

Protein	Function_ID	Function_description	E-value
NZ_CP017181.1\|WP_014883191.1\|1506251_1507904_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP017181.1\|WP_014883167.1\|1487984_1488608_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374267	pfam15977, HTH_46, Winged helix-turn-helix DNA binding.	4.03183e-16
NZ_CP017181.1\|WP_069601856.1\|1515997_1516219_-\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	6.18655e-47
NZ_CP017181.1\|WP_023332524.1\|1503419_1503854_+\|DoxX-family-protein	gnl\|CDD\|311556	pfam07681, DoxX, DoxX. These proteins appear to have some sequence similarity with pfam04173 but their function is unknown.	4.72814e-11
NZ_CP017181.1\|WP_069601854.1\|1510103_1511762_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP017181.1\|WP_059372788.1\|1499059_1500499_-\|SDR-family-oxidoreductase	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.85075e-140
NZ_CP017181.1\|WP_023332526.1\|1508048_1508948_-\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	4.1808e-112
NZ_CP017181.1\|WP_023336997.1\|1497956_1498970_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	1.23782e-52
NZ_CP017181.1\|WP_045134882.1\|1495448_1495889_+\|type-III-secretion-system-invasion-protein-IagB	gnl\|CDD\|185228	PRK15328, PRK15328, type III secretion system invasion protein IagB.	6.72427e-90
NZ_CP017181.1\|WP_045134888.1\|1489246_1490812_-\|peptidoglycan-binding-protein	gnl\|CDD\|225806	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].	0.00115277
NZ_CP017181.1\|WP_006174393.1\|1516486_1516807_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	9.90991e-48
NZ_CP017181.1\|WP_023332528.1\|1511758_1512715_-\|DUF535-domain-containing-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	4.41395e-123
NZ_CP017181.1\|WP_014883196.1\|1512874_1513990_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP017181.1\|WP_069601855.1\|1513986_1515927_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP017181.1\|WP_023332523.1\|1501549_1503268_-\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP017181.1\|WP_069601853.1\|1496022_1497852_+\|chitinase	gnl\|CDD\|381595	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.	1.00465e-68
NZ_CP017181.1\|WP_023337002.1\|1505272_1506241_-\|NADH-oxidoreductase	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
NZ_CP017181.1\|WP_014883193.1\|1509118_1509814_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	2.15557e-146
NZ_CP017181.1\|WP_045268543.1\|1500509_1501511_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|236710	PRK10534, PRK10534, L-threonine aldolase; Provisional.	0

>NZ_CP017181.1|WP_023332524.1|1503419_1503854_+|DoxX-family-protein
MVKSLLIAVNEKLSCDDLGKLLLRLAVGGLMLFHGLHKLFGGVGFISGMLVEKGLPGFIAYGVLIGEVVAPMLIIVGLFTRPAALMLAFTMIVAWLMVGMGETLALDKVGAWAIESLVYFFIGSLAVAFLGAGRFALGKAPAWR
>NZ_CP017181.1|WP_023332523.1|1501549_1503268_-|ubiquinone-dependent-pyruvate-dehydrogenase
MKQTVAAYIAKTLEQAGVKRIWGVTGDSLNGLSDSLNKMKTIEWMPTRHEEVAAFAAGAEAQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVIPGDVALKSAPEGASTHWYHAPQPVVTPAEEELKKLAQLLRYSSNIALMCGSGCAGAHKELLEFAGKLKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQFPYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLAALLPLLEEKTDRAFLDKALSDYRDARKGLDDLAKPSDKAIHPQYLAQQISHFADDDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAKATAPERQVVAMCGDGGFSMLMGDFLSVVQMKLPLKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASDVDEALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELAKTNWLR
>NZ_CP017181.1|WP_045268543.1|1500509_1501511_-|low-specificity-L-threonine-aldolase
MIDLRSDTVTRPSRAMLEEMMAAPVGDDVYGDDPTVNALQRYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAPDGTLPLDKVAAKIKADDIHFARTKLLSLENTHNGKVLPREYLKAAWDFTRERKLGLHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNADYIKRANRWRKMTGGGMRQAGILAAAGLYALKNNVARLKDDHDNAAWMATQLREIGADVMRHDTNMLFIRVGDEHAAALGEFMKARGVLINASPVVRLVMHLDVNREQLAEVVKHWQAFLQR
>NZ_CP017181.1|WP_059372788.1|1499059_1500499_-|SDR-family-oxidoreductase
MPQRILVLGASGYIGQHLTTALSQRGHQVLAAARNTDRLQKLALPGVTCHNVDLNWPKALPALLEEVDTLYYLVHSMGEGGDFIAHERQVALNVRDALLQTPVKQVIFLSSLQAPESEQSDHLRARQLTADTLRGANIPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALANLLHYLVALLDHPAEQHRVLEAAGPEVLSYQQQFEHFMRVSGRRRWLIPIPFPTRWISVWFLNVITSVPPTTAKALIQGLKHDLLADDRELRALIPQDLIRFDDAVRNTLKEEEQLVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVKTSASLEALWEVVNQIGGKERYFFGNLLWQTRGTMDLLVGHRLAKGRPARPFLEVGDAVDSWKVIIVEPEKQLALLFGMKAPGLGRLCFTLKDKGDHRELDVRAWWHPHGMPGLFYWLFMIPAHLFIFRGMAKRIAQLAEQKTKITH
>NZ_CP017181.1|WP_023336997.1|1497956_1498970_-|NAD(P)-dependent-oxidoreductase
MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLQKMGAEFVHADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQEAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDVQEDFRPARFACEFARSKAASEEVIDLLAQSNPHTRFTVLRPQSLFGPHDKVFIPRLAQMMHHYGSVLLPRGGDALVDMTYYENAVHAMWLASQSDCDKLISGRAYNITNGEPCTLRSIVQRLIDELQIDCRIRSVPYPMLDMIARSMERFGSKAAKEPALTHYGVSKLNFDFTLDISRAENELGYRPVVTLDEGIVRTAAWLRDHGKLHR
>NZ_CP017181.1|WP_069601853.1|1496022_1497852_+|chitinase
MNKRTLLSVLVAGACVAPFMAQAASLQATTSEPYTMNASDLAKKEKELTSFPLMDAVKETIKTLDNAQVELIEPGRAANPENVKRVEGIVKASDWEYLFPLRAQAYTYSNFLKAVGKFPALCKTYNDGRDSDAICRKELATMFAHFAQEMGGHESWRPEAEWRQALVHVREMVWSEGQKGGYNGECNPDVWQGQTWPCGKDKDGDFLSYFGRGAKQLSYNYNYGPFSEAMYGDVRTLLDKPELVADTWLNLASAIFFFAYPQPPKPSMLQVIDGTWQPNDHDKANGLVPGFGVTTQIINGGVECGGPTEIAQSENRIKYYKEFANYLKVPVPANEVLGCANMKQFDEGGAGALKIYWEQDWGWSADTPSGATYSCQLVGYQTPFSAFKEGDYSKCVQKFFNVNIVNDDGSVTPDETPVTPTPTPTPSEDETPAPAPVPDETPAEPAAVNHAPVAHIAGPIGAVDAGAQVSLSAEGSTDEDGNALTYTWRSQDGQTVTGQDKAVVNFKAPESATAQQIEISLTVSDGELSSTTSYLLNVKAKAAPSQDEGTSGDYAAWSANSKYKAGDIVNNHGKLFQCKPFPYSGWCNNAPAYYEPGAGLAWSDAWTAL
>NZ_CP017181.1|WP_045134882.1|1495448_1495889_+|type-III-secretion-system-invasion-protein-IagB
MKKLIFLLLIISQSALANCWDKAAHYYHVDPYLLYAIANVESGMNPYAVGRNHDGTRDVGLMQINSSHFSALESRGIDEYRLITEPCTSIMVGASILSSMIKVYGYNWEAVGAYNAGLKKENYPQRMIYAHKVWRKYQELKATANE
>NZ_CP017181.1|WP_045134888.1|1489246_1490812_-|peptidoglycan-binding-protein
MYQKHFNFKNPPFRKIVRSNGDFLVPYYQDVFNLLKEKTQQAGIIGLFSDDAPLLGQFSDALKSAHPDVLAINAFPKLSASSLLYKLSPGTKENKNRIQAVDAVLHQWQAEKNRAKILIVSHCEAMKESCHEVLAMLLTRAQELAFRLSVVLTGAADRDIVLMQQSELREYAHTRHTLRPLTCREYLSYVQAQCEEHGCENAPLSPARVRKMHALTKGNISKLNELSHLSMLAAWTERAAQVSPRHLRLAAGEILPAKKHGKRLATVGLFASVLFAACGWYLTSSIAGKLPVQLPVPVSWKQQAPKVEAPVVPVIDNEMVNQPDAMHQLYLMWGYDASADDALCQNAAKVNLMCKQGNASPDALAQEGYPWVSELKTGDHLNYAVVARVGDTSLDLLMNNRTWQVSRRWFNQHATGNFTQLHRLTPEGKDAISAASDTKDMGWLDQQLSLALGQPETHSQTWTAEMMKRTREFQQKMHLHVDGIPGEDTLMQLMRETHTAPSVLLQTTHATPDANTQEKHS
>NZ_CP017181.1|WP_023332510.1|1488608_1489247_-|hypothetical-protein
MSTICLAAQRSYTTGEAVWFSYRLPRLRNIVSHAFLGMVALCAMIMAGLYAHVYWNLRHPAPEPVKASAAKPETQLSDMHYVYVSKPFPHPHPHPQPKPAPVQEDVPAMQDLPINSDDADWQQAPDGDVPHDTSRDTLPGTEAHEAASASTGSDDASISELLKQALKEQEQDYSQGKIPAPPVDETQDNSQRDVNHKVDARSPLSEKGDRLE
>NZ_CP017181.1|WP_014883167.1|1487984_1488608_+|helix-turn-helix-domain-containing-protein
MLSIYGKKLRPQDEMNSIISATSGFEEKTLKKWQKISTSDSQYIHIIVSGEVEFRRESDELCMFTVTGQCIFGLSSMYYDATHMYGLVRANTVVRSIKKETFAQLMTDNNLWPQLTKVLSWYICMLSKRDDVLVARSAYSVVREFLYEINDLIVHQQRDINVYDYIQEYTNLARSTIIKILSDLKKGQYIVVEKGRLLNLTALPEKY
>NZ_CP017181.1|WP_023337002.1|1505272_1506241_-|NADH-oxidoreductase
MTMPTSQCPWRMQVHHIHQETPDVWTLSLICHDYYPYRAGQYALVSVRHSADTLRAYTISSTPGVSEYITLTIRRIDDGAGSQWLTRDVKRGDYIWLSDAQGDFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVQVIFSVRSPEDVIFAEEWRNYPVTLVAEHNAVHGFVPGRLSRELLQSVPDIAHRTVMTCGPAPYMDIVEKEVKALGVTRFFKEQFFTPVAEAATSGIQFTKLQPAQTFFGRVGTTLLEALESNKVPVVAACRAGVCGCCKTKVVSGEYTVTSTMTLSDAEIAEGYVLACSCHPQGDLVLA
>NZ_CP017181.1|WP_014883191.1|1506251_1507904_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAFKAREYGIVDHYVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLNADANARVDNPMSELQLASDDLGDLQRQAADFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFRVMSILDAGETSTYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLKQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRETLLGAADSLIDLVSREKLRHIFLVGGCDGARGERNYFTDFATSVPDDCLILTLACGKYRFNKLDFGNIEGLPRLIDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVTNIVTGPTAPGFLTPDLLAVLNEKFGLRSVTNVEDDMKQLLSA
>NZ_CP017181.1|WP_023332526.1|1508048_1508948_-|lysine-exporter-LysO-family-protein
MFSGLLIILLPLIAGYLIPLRQESALRLINRFLSGIVYLILFFMGISLAFLDNLSANLLSILHYSAVTVTVILLCNIAALLWLERTIPWKNHHLQEKLPSRIAMALESLKLCGVVVLGFLLGLTGWAFLRHATEASEYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMIIAVMVVASSMVAGVINAFILDLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRSGGLEMVPAAIVHGFILSLLVPILMAFFSA
>NZ_CP017181.1|WP_014883193.1|1509118_1509814_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKDVIGYIVAQVVGGIIAAGVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKHAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLFWVMPIIGGILGGVLYRTLLEKRD
>NZ_CP017181.1|WP_069601854.1|1510103_1511762_+|ATP-dependent-endonuclease
MLLERVEIVGFRGINRLLLQLEQNNVLIGENAWGKSSLLDALTLLLSPEDDLYHFVHDDFWFPPGDVTGREKHLHIILTFRESEPGRHRVRRFRPLSPCWVPCDDDFHRIFYRLEGEMAENEGVLTLREFLDEKANPIPLDNIDDLARHLTRLTPVLRLRDARFMRRIRNGTVPNMPEVEVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTSESRHRLMRRRSHDEQRSWRYLDIINRMIDRPGGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLHPIMLSVAWHLLNLLPLQRITTTNSGELLSMTPVEHICRLVRESSRVSAYRLGPGGLNAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYASTVRSLLNNEREEERDHLTMLPAMDMEHFMYRQGFDDVFHRIAMVPVDVPMNMRRVIAKAIHRSSKPDLAIEVATEAGRRGVEAVPTLLRKMFSRVLWLARGRAD
>NZ_CP017181.1|WP_023332528.1|1511758_1512715_-|DUF535-domain-containing-protein
MSSIVDTPYSPLTQPASGWQLFKNLALGKLTPGLAWQNPAYRRKFVLRSLAAPVTTSRLLTRLAKQPRLMQILQAQPGLPCRMHRPWLTVNMERQHALESLNWHYQIMSRQLPATLLQGYLSKQGATLLTLTGKDEQHFTVRLCADAFMDKEGEATLVFCDDQNTVLAEITFTLCPFAGKSTLFIGGLQGAKAHVPHERIQKATKACHGLFPKRLLVETAMTLGAAFPVEQIVAVSNDTHIYRSWRYRKKKEGKLLADYDSFWLSLGGEKQDSGNFMLPLVMPRKPMEEIASKKRSEYRRRYELLDSLIQQVNQATRG
>NZ_CP017181.1|WP_014883196.1|1512874_1513990_+|macrolide-transporter-subunit-MacA
MNLKGKRRTLFLLLAVVILVGGFWLWQVLNAPVPQYRTLIVRPGELQQNVLATGKLDALRKVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAENQIREVEATLMELRAQRAQALAERNLAQVTLTRQQALAKTQAISKQDLDTATTELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTQIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQNAWFTVLGDPQTRYEGVLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQLTGVKNVLTIPLSALGESAGDNRYKVKVLRNGETRDREVVIGARNDTDVVVVKGLEEGEEVVVSESLPGAAK
>NZ_CP017181.1|WP_069601855.1|1513986_1515927_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELKDIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLNAAQNVEVPAVYAGVERKKRLERAKTLLTRLGLAERVEYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIHDGELVSNPPPRASRAAAPKEALPASTGWGQFSSGFREALNMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRVGNVDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKASVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSALAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGASASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLFLPGWEIGFSPVAIITAFLCSTFTGILFGWLPARNAARLDPVDALARE
>NZ_CP017181.1|WP_069601856.1|1515997_1516219_-|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKGGQSVRFDVHQGPKGNHASLIVPIEAETVA
>NZ_CP017181.1|WP_006174393.1|1516486_1516807_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA

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Crispr_ID: NZ_CP017181_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017181_2

2031610-2031758

Orphan

Consensus_repeat	Method
GCTTTACGCGGGTCAACCGGTGCTTCTGGTTCTGCTGCAGGTGCCTGCTGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017181_2

>merge|NZ_CP017181|2|2031610-2031758|CRISPRCasFinder
GCTTTACGCGGGTCAACCGGTGCTTCTGGTTCTGCTGCAGGTGCCTGCTGCGCCGCTTTACGCGCTTTGGCGCGGGCAATCGCGGCTTCAACAGCGGCTTTACGCGGATCAACCGGTGCTTCTGGTTCTGCTGCAGGTGCCTGCTGCGC

>NZ_CP017181|2|2|2031610-2031758|CRISPRCasFinder
GCTTTACGCGGGTCAACCGGTGCTTCTGGTTCTGCTGCAGGTGCCTGCTGCGC	CGCTTTACGCGCTTTGGCGCGGGCAATCGCGGCTTCAACAGCG
GCTTTACGCGGATCAACCGGTGCTTCTGGTTCTGCTGCAGGTGCCTGCTGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017181.1\|WP_069601973.1\|2026327_2027836_-\|dipeptide/tripeptide-permease-DtpA	unknown	unknown	gnl\|CDD\|181969
NZ_CP017181.1\|WP_069601972.1\|2024344_2025502_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017181.1\|WP_058690708.1\|2029762_2030383_-\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
NZ_CP017181.1\|WP_045134974.1\|2030393_2031446_-\|electron-transport-complex-subunit-RsxD	unknown	unknown	gnl\|CDD\|234844
NZ_CP017181.1\|WP_008500570.1\|2028441_2029077_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661
NZ_CP017181.1\|WP_013096896.1\|2035319_2035535_-\|transcription-modulator-YdgT	unknown	unknown	gnl\|CDD\|182426
NZ_CP017181.1\|WP_045134972.1\|2029073_2029760_-\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NZ_CP017181.1\|WP_045134970.1\|2023381_2024242_+\|pyridoxal-kinase-PdxY	unknown	unknown	gnl\|CDD\|235592
NZ_CP017181.1\|WP_014883581.1\|2034134_2034716_-\|electron-transport-complex-subunit-RsxA	unknown	unknown	gnl\|CDD\|235352
NZ_CP017181.1\|WP_008500575.1\|2021258_2021915_+\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|235555
NZ_CP017181.1\|WP_069601974.1\|2038326_2039499_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|224090
NZ_CP017181.1\|WP_048996078.1\|2036135_2037176_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|183212
NZ_CP017181.1\|WP_014883582.1\|2034792_2035233_-\|DUF2569-domain-containing-protein	unknown	unknown	gnl\|CDD\|371223
NZ_CP017181.1\|WP_032628883.1\|2035766_2035928_-\|division-septum-protein-Blr	unknown	unknown	gnl\|CDD\|380226
NZ_CP017181.1\|WP_023332825.1\|2037228_2038230_-\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NZ_CP017181.1\|WP_023337191.1\|2033556_2034135_-\|electron-transport-complex-subunit-RsxB	unknown	unknown	gnl\|CDD\|235347
NZ_CP017181.1\|WP_069601975.1\|2040998_2042279_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP017181.1\|WP_022650951.1\|2042311_2042560_-\|excisionase-family-protein	unknown	unknown	gnl\|CDD\|369087
NZ_CP017181.1\|WP_014883572.1\|2022040_2023315_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_CP017181.1\|WP_014883574.1\|2025616_2026222_-\|glutathione-transferase-GstA	unknown	unknown	gnl\|CDD\|182533

Protein	Function_ID	Function_description	E-value
NZ_CP017181.1\|WP_069601973.1\|2026327_2027836_-\|dipeptide/tripeptide-permease-DtpA	gnl\|CDD\|181969	PRK09584, tppB, dipeptide/tripeptide permease DtpA.	0
NZ_CP017181.1\|WP_069601972.1\|2024344_2025502_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.1013e-19
NZ_CP017181.1\|WP_058690708.1\|2029762_2030383_-\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	6.61105e-139
NZ_CP017181.1\|WP_045134974.1\|2030393_2031446_-\|electron-transport-complex-subunit-RsxD	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	0
NZ_CP017181.1\|WP_008500570.1\|2028441_2029077_-\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	2.35105e-159
NZ_CP017181.1\|WP_013096896.1\|2035319_2035535_-\|transcription-modulator-YdgT	gnl\|CDD\|182426	PRK10391, PRK10391, transcription modulator YdgT.	7.04149e-48
NZ_CP017181.1\|WP_045134972.1\|2029073_2029760_-\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	5.70635e-132
NZ_CP017181.1\|WP_045134970.1\|2023381_2024242_+\|pyridoxal-kinase-PdxY	gnl\|CDD\|235592	PRK05756, PRK05756, pyridoxal kinase PdxY.	0
NZ_CP017181.1\|WP_014883581.1\|2034134_2034716_-\|electron-transport-complex-subunit-RsxA	gnl\|CDD\|235352	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional.	1.58733e-114
NZ_CP017181.1\|WP_008500575.1\|2021258_2021915_+\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|235555	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase.	2.69372e-132
NZ_CP017181.1\|WP_069601974.1\|2038326_2039499_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	1.64104e-179
NZ_CP017181.1\|WP_048996078.1\|2036135_2037176_+\|oxidoreductase	gnl\|CDD\|183212	PRK11579, PRK11579, putative oxidoreductase; Provisional.	0
NZ_CP017181.1\|WP_014883582.1\|2034792_2035233_-\|DUF2569-domain-containing-protein	gnl\|CDD\|371223	pfam10754, DUF2569, Protein of unknown function (DUF2569). This family is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homolog thereof.	2.13181e-37
NZ_CP017181.1\|WP_032628883.1\|2035766_2035928_-\|division-septum-protein-Blr	gnl\|CDD\|380226	NF033231, small_Blr, division septum protein Blr. Members of this family are Blr, named beta-lactam resistance protein because mutants have heightened sensitivity to beta-lactam antibiotics, but actually involved in cell division. The protein is very small.	4.94631e-22
NZ_CP017181.1\|WP_023332825.1\|2037228_2038230_-\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	1.85908e-155
NZ_CP017181.1\|WP_023337191.1\|2033556_2034135_-\|electron-transport-complex-subunit-RsxB	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	1.62656e-127
NZ_CP017181.1\|WP_069601975.1\|2040998_2042279_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	3.84441e-28
NZ_CP017181.1\|WP_022650951.1\|2042311_2042560_-\|excisionase-family-protein	gnl\|CDD\|369087	pfam06806, DUF1233, Putative excisionase (DUF1233). This family consists of several putative phage excisionase proteins of around 80 residues in length.	1.23202e-30
NZ_CP017181.1\|WP_014883572.1\|2022040_2023315_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP017181.1\|WP_014883574.1\|2025616_2026222_-\|glutathione-transferase-GstA	gnl\|CDD\|182533	PRK10542, PRK10542, glutathionine S-transferase; Provisional.	2.26871e-152

>NZ_CP017181.1|WP_045134974.1|2030393_2031446_-|electron-transport-complex-subunit-RsxD
MVFRIASSPYTHNQRQTSRIMMLVCLAALPGIAVQCWFFGWGTLFQIALGCISAVAAEALVLKLRKMTVSRIIADNSALLTGLLLAISIPPFAPWWMVVLGTVFAVIIAKQLYGGLGHNPFNPAMIGYVVLLISFPVQMTSWLPPHDIAATVPGFMDALHVIFTGHTALGADMNALRMGVDGISQATPLDTFKTSLHAGHSVEQIMKSAIYSGMLAGAGWQWVNLAYLLGGLFLLQQKAIRWHIPVSFLVTLAVCATLGWVFSPESLASPQMHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR
>NZ_CP017181.1|WP_058690708.1|2029762_2030383_-|electron-transport-complex-subunit-RsxG
MLKTMQKHGVTLAVFAAVLTGMTALVNELTKSTIDEQAVKQQKALFDQVIPSDFYDNDLQKSCFVVDAPQLGKGPHRLFIARKGDKPVGAVMEATAPDGYSGAIQLLVGSDFSGTILGTRVTQHHETPGLGDKIETRLSDWILHFAGKVIHGEDDTAFAVKKDGGEFDQFTGATITPRAVVNAVKRAGLYAETLPAQINNLPACGE
>NZ_CP017181.1|WP_045134972.1|2029073_2029760_-|electron-transport-complex-subunit-E
MNQVKEVIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLSISALRRWTPSEIRIPIYVMIIASVVSIVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAVKNSPAMSALDGFSIGMGATGAMFVLGSLREILGNGTLFDGADALLGGWAKSLRIEVFHTDTPFLLAMLPPGAFIGLGMMLAVKYLIDEKRKRRAAERSVQEGIPEKAS
>NZ_CP017181.1|WP_008500570.1|2028441_2029077_-|endonuclease-III
MNKEKRIAILTRLRDENPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATALLYPVANTPKAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEQHGGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVSNRTNFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVYP
>NZ_CP017181.1|WP_069601973.1|2026327_2027836_-|dipeptide/tripeptide-permease-DtpA
MSTANNKPTDESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYGLVAWSGHDAAVVYMGMATIAVGNGLFKANPSSLLSTCYSKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKFGWSVAFALSFVGMLITVVNFLFCRSWVKDYGSKPDFEPVHMGKLLATIVGVVILAVIATWLLHNQGIARAVLGVVALGIVVIFAKEAFAMQGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAFEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGTKFATDAGIVSVNWLILSYALQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAAIIAGKIANLMAVPENVTDPLVSLNVYGTVFMQIGIATAVIAVLMLLTAPKLNRMTQDDDKTAKASETATA
>NZ_CP017181.1|WP_014883574.1|2025616_2026222_-|glutathione-transferase-GstA
MKLFYKPGACSLASHITLRESGKDFTLDGVDLMKKRLENGDDFLAINPKGQVPALLLDDGTLLTEGVAIMQFLADNVPDRQLLAPTGSIARYKTLEWLNYIATELHKGFTPLFRPDTPEEYKPTLRALLEKKLQYVNASLKDDQWICGSRFTIADAYLFTVLRWARAVKLNMEGLDHITSYMTRMAERPAVAAALKAEGLS
>NZ_CP017181.1|WP_069601972.1|2024344_2025502_+|DDE-type-integrase/transposase/recombinase
MPWTETRPMQRLDFIRACHAGTDSFSALCRLFGISRKTGYKWLQRFDPSDLSSLSDRSRAPRSHSRTVPDDIAGHLTALRQKHPDWGPKKLRMWLLNHHVDFTVPAASTIGDILKREGLVPDKKRKRRTPGNRQPLTIISENNQVWSADFKGKFRLLSREYCHPFTLTDNHSRYLLSCRGTHRESEPFVRECLTDAFLEYGLPEVLRTDNGQPFAGTGIAGLSRLAVWLIKLGIRPERIRKGHPEENGRHERMHRSLKSAVKQGNTFMTMEEQQRWFSDYRKEFNYERPHEALAGATPGTVWQPSNRHWDGRVPEYAYPEGGTVYRVKSRGTLYMGKKGTVFLSEALTGEYIMLEEQADGLEAIIFNGITLAYYDRKTQSVLRID
>NZ_CP017181.1|WP_045134970.1|2023381_2024242_+|pyridoxal-kinase-PdxY
MKNILAIQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWAGCVMPPSHLTEVVQGIADIDQLKRCDAVLSGYLGSAEQGEHILGIVRQVKAANPAAKYFCDPVMGHPEKGCIVAPGVAEFHVRHALPASDIIAPNLIELEILCEHPVNSVEEAVSASRELIAQGPEIVLVKHLARAGLSQSRFEMLLVTKDDAWHISRPLVDFSLRQPVGVGDVTSGLLLVKLLQGATVRDALEHVTAAVYEIMIATKEMQEYELQVVAAQDRIAKPEHYFSATRL
>NZ_CP017181.1|WP_014883572.1|2022040_2023315_+|tyrosine--tRNA-ligase
MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQMAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFNCGDNAAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIADINALEEEDKNSGKAPRAQYVLADEVTKLVHGEEGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQADPEYTFVDGDRLYGRYTLLRRGKKNYCLVCWK
>NZ_CP017181.1|WP_008500575.1|2021258_2021915_+|pyridoxamine-5'-phosphate-oxidase
MSDNDELQQIAHLRREYTKGGLRRQDLPAEPLVLFERWLKQACEAKLADPTAMVVATVDENGQPYQRIVLLKHYDEKGLVFYTNLGSRKAHHLENNPRISLLFPWHMLERQVMVTGKAERLSTLEVVKYFHSRPRDSQIGAWVSKQSSRISARGVLESKFLELKQKFQQGEIPLPSFWGGFRIPIEQIEFWQGGEHRLHDRFLYQRENGGWKIDRLAP
>NZ_CP017181.1|WP_023337191.1|2033556_2034135_-|electron-transport-complex-subunit-RsxB
MNAIWIAIASISVLGLAFGLILGYASRRFAVEDDPVVEKIDELLPQSQCGQCGYPGCRPYAEAVGIQGEKINRCAPGGEAVMLKIAALLNVDPQPVDGDADVQEPVRALAVIDEANCIGCTKCIQACPVDAIVGATRAMHTVVADLCTGCNLCVAPCPTQCITLRPVEATTESWKWDLQTIPVRNIPVEQHA
>NZ_CP017181.1|WP_014883581.1|2034134_2034716_-|electron-transport-complex-subunit-RsxA
MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTMASICAWLIDTWILIPLGLIYLRTLAFILVIAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVALLNINLGHNFMQSALYGFSAAVGFSFVMVLFASIRERLAAADIPAPFRGNAIALVTAGLMSLAFMGFSGLVKL
>NZ_CP017181.1|WP_014883582.1|2034792_2035233_-|DUF2569-domain-containing-protein
MTATPGERIGGWLIAPLAWLLVALLSASLALLLYTTALITPHAIQTLMSQSVLNIAMWFVSFVFAIGMWYYTLWLTIAFFKRRKGVPKHYIIWLLISVLLAVKAFAFSPVSDALAVRQLLFPLLAAALLVPYFKRSTRVKNTFVNP
>NZ_CP017181.1|WP_013096896.1|2035319_2035535_-|transcription-modulator-YdgT
MTVQDYLLKFRKINSLESLEKLFDHLNYTLSDNQDIINMYRAADHRRAELVSGGRLFNVGEVPKSVWRYVL
>NZ_CP017181.1|WP_032628883.1|2035766_2035928_-|division-septum-protein-Blr
MDKVQLRVMTSIINRIIELAGWIVLGVSVILLGVASHIDNYQPPEPVTVAQPK
>NZ_CP017181.1|WP_048996078.1|2036135_2037176_+|oxidoreductase
MSDNIRVGLIGYGYASKTFHAPLIAGTPGMMLAAVSSSDATKVHADWPSVPVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVIVDKPFTVTLSQARELDALAKGLGRLLSVFHNRRWDSDFLTVKTLLSEGTLGEILFFESHFDRFRPQVRHRWREQAGPGSGIWYDLAPHLLDQAVNLFGLPVSMTVDLAQLRPGAQTTDYFHAVLSYPQRRIVLHGTMVAAAESARYIIHGTRGSYVKFGLDPQEDRLKNGERLPQEDWGYDMRDGVVTRVEGEELVEETLLTMPGNYPAYYAAIRDALNGTGENPVPASQAIQIMELIELGIESAKHRATLCLA
>NZ_CP017181.1|WP_023332825.1|2037228_2038230_-|adenosine-deaminase
MIDTRLPLTDIHRHLDGNIRAQTILDLGRQYNLTLPAQTLESLIPHVQVTSNEPDLVSFLSKLDWGVKMLASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAMTHNLPVAGVVEAVIEGVRQGCETYDVQARLIGIMSRTFGEAACLQELEALLAHRDAITAVDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRALMDFLAEQRIGIESCLTSNIQTSTVATLAQHPLKTFLEHGVLASLNTDDPAVQGVDIIHEYNNAAPQAGLSREQIRQAQINGLEIAFLTPEEKQALRNKVATA
>NZ_CP017181.1|WP_069601974.1|2038326_2039499_-|pyridoxal-phosphate-dependent-aminotransferase
MFDFSTVVDRHGTWCTQWDYVADRFGAPDLLPFTISDMDFATAPCITDALHQRINHGVFGYSRWKNDEFLAAVAHWFRQRFNSHIDTETIVYGPSVIYMVSELIRLWSAPGDGVVVHTPAYDAFYKVIEGNRRHVVPVEMEKHASGWLGNMAALEAALAKPENRILLLCSPQNPTGKVWTREELTHMAELCARHNVAVISDEIHMDMVWGAHRHTPWNEVARGKWALLTSGSKSFNIPALTGAYGLIGEEESRNGYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRHYLEENLLYIAQELNSAFPKLNWQPPEATYLAWVDLRPLNIDDRALQKVLIEHQKVAIMPGYTYGNEGNGFVRLNAGCPRSKLEQGVKRLIAGINTLL
>NZ_CP017181.1|WP_069601975.1|2040998_2042279_-|site-specific-integrase
MAAYPTGVEVHGESLRIWFIYQGKRVRENLGVPDTPKNRKMAGELRASVCFAIKTGTFNYASQFPDSSNSEKFSTVRKQISLLELKSKWLGLKEMELSLGTLRRYDCHLTTTIETIGEHRYIGSLNTEDILSARKELLNGWQKTRHGLNHPPKKGRSVPTVNSYMACLGGMLGFAFKSGYLKTDLMAGITPLAKERPVPDPLTSDEYQRVVAACPTLQFQNMVIFAVNTGVRHGELSALAWEDVDTVNWTVTVSRNYSLKGNFTLPKTNAGIRTIQLTQPAIDALKAQMPLTRMMASHKVSVSLREYKKKRTDECTFIFSPSITSMNGKKTMCYVPGSINSAWRTALRRAGVRQRRSYETRNTYACWALVAGANPNFVAHQMGHSSAQMLFTVYGKWMTENNHDQVGILNASFTQNAPLMPHRKTA
>NZ_CP017181.1|WP_022650951.1|2042311_2042560_-|excisionase-family-protein
MSDIIQLVPNKWVTEELLTATTGMSKHMIQHARRSTWMEGKHYRHVAPDMAPKQNSPIMYNRDEINHWIEHQSPAKRRRISA

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Crispr_ID: NZ_CP017181_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017181_3

2053045-2053149

Orphan

Consensus_repeat	Method
TGTCCAGCCGATGTCCAGCCAGTGTCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017181_3

>merge|NZ_CP017181|3|2053045-2053149|CRISPRCasFinder
AGTCAAATTTTTGTCCAGCCGATGTCCAGCCAGTGTCCAGCGCAAACGCAGTTGTACCAATGCCTGCGGAGGTGGAGTGTCCAGCCGATGTCCAGCCAGTGTCCA

>NZ_CP017181|3|3|2053045-2053149|CRISPRCasFinder
AGTCAAATTTTTGTCCAGCCGATGTCCA	GCCAGTGTCCAGCGCAAACGCAGTTGTACCAATGCCTGCGGAGGTGGAG
TGTCCAGCCGATGTCCAGCCAGTGTCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017181.1\|WP_069601983.1\|2050877_2051537_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224885
NZ_CP017181.1\|WP_069601988.1\|2056028_2056232_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_022650973.1\|2051645_2051864_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP017181.1\|WP_069601984.1\|2051894_2052440_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368819
NZ_CP017181.1\|WP_081330956.1\|2057207_2058071_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_069601986.1\|2054984_2055284_+\|protein-ren	unknown	unknown	unknown
NZ_CP017181.1\|WP_069601980.1\|2047961_2048120_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_069601987.1\|2055280_2055577_+\|DUF4406-domain-containing-protein	unknown	unknown	gnl\|CDD\|379581
NZ_CP017181.1\|WP_069601992.1\|2058553_2059009_+\|recombination-protein-NinB	unknown	unknown	gnl\|CDD\|182057
NZ_CP017181.1\|WP_015571544.1\|2052523_2052670_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_058657563.1\|2047755_2047965_-\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236900
NZ_CP017181.1\|WP_069601979.1\|2047398_2047683_-\|host-nuclease-inhibitor-GamL	unknown	unknown	unknown
NZ_CP017181.1\|WP_069601993.1\|2059008_2059179_+\|NinE-family-protein	unknown	unknown	gnl\|CDD\|182029
NZ_CP017181.1\|WP_069601989.1\|2056228_2056693_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_023306034.1\|2049856_2050765_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_069601991.1\|2058070_2058325_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_069601985.1\|2053551_2054985_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP017181.1\|WP_069601981.1\|2048116_2048323_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_026080591.1\|2049521_2049719_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017181.1\|WP_069601990.1\|2056695_2057211_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017181.1\|WP_069601993.1\|2059008_2059179_+\|NinE-family-protein	gnl\|CDD\|182029	PRK09689, PRK09689, prophage protein NinE; Provisional.	7.88786e-22
NZ_CP017181.1\|WP_069601992.1\|2058553_2059009_+\|recombination-protein-NinB	gnl\|CDD\|182057	PRK09741, PRK09741, hypothetical protein; Provisional.	3.77116e-93
NZ_CP017181.1\|WP_022650973.1\|2051645_2051864_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	9.41783e-11
NZ_CP017181.1\|WP_069601984.1\|2051894_2052440_+\|hypothetical-protein	gnl\|CDD\|368819	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	6.38436e-32
NZ_CP017181.1\|WP_069601985.1\|2053551_2054985_+\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	0
NZ_CP017181.1\|WP_069601983.1\|2050877_2051537_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	1.42295e-33
NZ_CP017181.1\|WP_058657563.1\|2047755_2047965_-\|cell-division-protein-FtsZ	gnl\|CDD\|236900	PRK11354, kil, FtsZ inhibitor protein; Reviewed.	4.37804e-37
NZ_CP017181.1\|WP_069601987.1\|2055280_2055577_+\|DUF4406-domain-containing-protein	gnl\|CDD\|379581	pfam14359, DUF4406, Domain of unknown function (DUF4406). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 98 and 145 amino acids in length.	1.12817e-36

>NZ_CP017181.1|WP_015571544.1|2052523_2052670_+|hypothetical-protein
MAKNPRYYHTAVHKNITRDRFIRSVNPIVAEKMRAILEELKRKESGRG
>NZ_CP017181.1|WP_069601984.1|2051894_2052440_+|hypothetical-protein
MHSLAYQQGNKFSPTAMIYQNRREPDSAALNIDGIRAAVRAWAADCRSREFVAALIVEEWRATGGTGLDIPTDSHRQMQKVFRWIDGDTEYAANNIRQLAPAIMSVLPLEYRNRLAPQNDTMSLIASAMKECAEAKQAVLLDAPEHQKLKEVSEGIASLFRLMPEQVGPLMTMVTSMLGVI
>NZ_CP017181.1|WP_022650973.1|2051645_2051864_+|helix-turn-helix-transcriptional-regulator
MNNIRKIRRNIGLTQRQIAEELNLSTGAVCHYEKNKRSLSLEQCRAIVAALNKHGASVSVDDVFPPISNNAA
>NZ_CP017181.1|WP_069601983.1|2050877_2051537_-|helix-turn-helix-domain-containing-protein
MTMKWYDLAKTLMKSQGINQEQLAEHLGITKGAVSHWLNARREPSLSEIAKILQFLGKKNFSVGAGGMIIDDTLKGDVEYAGPYNPGNKYPVISSVQAGSWCEAVEPYTLKDIDLWLESNAHIQGDAFWLLVEGESMTAPTGLSIPEGTYVLFDTGRDAVNGSLVIAKLSDSNEATFKKLVIDGAQKYLKGLNPQWPLVPINGNCRIIGVAVETKLRLV
>NZ_CP017181.1|WP_023306034.1|2049856_2050765_-|hypothetical-protein
MAELLELEFTEDIYYSIGNNPSIKEIIASLQGWEALIKQSRGVLSELTGSHVLDVDVRVSKLEVGSLKEKLLIRLFFANEEELDKFVDGVRTKYIGEGKVRNALLWAVVIALAGTAFLSLAKLMAPNTTSHFEANNNTIINIGAGQTEITPERIQAIIDSSVTDKKVLAKSAVKILSPARNDENATLVIGSGDVKYTIPAETIRKVPTDVEFPPDTYTRDHSDVDLEIRATDLDNPEKWAAVIPGLVDRRVKLVLAPGINPDEIKRIYTARADVTITYKHTSSKSNPYQPSEIFLKSIITDN
>NZ_CP017181.1|WP_026080591.1|2049521_2049719_+|hypothetical-protein
MVLDEERISMKIQAMGRAVMELSLADLPMTQQNIIDKLKQYRKETGNVIGKGVNRDAAEIVRKGQ
>NZ_CP017181.1|WP_069601981.1|2048116_2048323_-|hypothetical-protein
MSNKEYEQAFPTRDDNYDSKYSGPGMTLRDYFAAKAMQAMISAHEPQGAIPGWAYEMADEMLRAREAS
>NZ_CP017181.1|WP_069601980.1|2047961_2048120_-|hypothetical-protein
MTVTYNGKQYTAKKLNDNEWQLTSVSNPREKLTLNRWQMHVAGLLAQVEGKK
>NZ_CP017181.1|WP_058657563.1|2047755_2047965_-|cell-division-protein-FtsZ
MMHHYGTTPLIRQCVTPGMMALHEGRTYRVSAVIQERKWVYLHTDAEIIRLSDCVIDVLLDGHGNPIQH
>NZ_CP017181.1|WP_069601979.1|2047398_2047683_-|host-nuclease-inhibitor-GamL
MNAYLTYDRIEDRRWVEQQLTDEKEKWIDDRAQQIIDMMPKEPSGLFHFTVPIDSSPYEGLRSDRAGEAYNDFISAVAYAQAEHDWEHRTGCPF
>NZ_CP017181.1|WP_069601985.1|2053551_2054985_+|AAA-family-ATPase
MTAEFMAVPQNLEAEQSVIGGLLLDDDNSERVQKVLAMLKPESFYSRPHQLIFAEMRQMFRDNKPVDGLTLFDALEGKGLAEQVGGFAYLAEIAKNTPSAANIVAYAASVREAAMERYGINRLTEATELLYSRNGMSATQKYEAIQGIFTQLADHSKTGSRRGLRSFGEVMDDWVADLEKRFDPSGEQRGMSTGIPSLDRLLAPKGLVKGSLFVIGARPKMGKTTLYGQMAINCAVREKKPALMFSLEMPGDQILEKLVGQKSGINPSIFYMPVTDDADDQYQGDYDGDFKKAIATAGRLSEIDMLYIDDTPGLSLAHIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELGCVVVLLTQLNRELEKRVNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGSTGTVYCNQINGAIYDTDQQAAAAERRGREQQPKKKGGY
>NZ_CP017181.1|WP_069601986.1|2054984_2055284_+|protein-ren
MKGKQAILRYLETHQTFTAKDVATECGMTINCITKNAIDLERSRKIVRVSKVWRTVTYRLATPEEQDGTARSCTNGIFQECRNSPAMKRVLMVWGRVGV
>NZ_CP017181.1|WP_069601987.1|2055280_2055577_+|DUF4406-domain-containing-protein
MKIYIAGPMTGYENYNRPMFNAVAQQMLSGGHVVLNPAALPDGLSQREYMDICLAMLRCADAIHMLHGWQESEGAVAEHAMAKKLGIKVSYQFEGAAA
>NZ_CP017181.1|WP_069601988.1|2056028_2056232_+|hypothetical-protein
MTRIRNFGWNRLKLATLSYEEISALEEQVKQEHACKDGIHMYDKAGRDKLDALSWAVYNKQKQEAAQ
>NZ_CP017181.1|WP_069601989.1|2056228_2056693_+|hypothetical-protein
MSNIDKQAVQAVADLKAGYTLGHADVEIIQQMALDAVTLHDALEAAEKRIAELESDNAYIKNRYKELDLLIGKNILVMQAAIIEWQGTGDAKKGLAWIYNTLFGPGELPDESEKDAQAYFDRKYAPLDEELMNLHRWFWEQSEAERAAAAAKGE
>NZ_CP017181.1|WP_069601990.1|2056695_2057211_+|hypothetical-protein
MALSHDELCQIAYSFLKRNGFKVCFHDRFVAVTSTGEQPDAMGFRNFASCLIEAKCSRADLLADRKKRFRQNPELGMGDWRFFISEPGIITVDDLPAGWGLLHVINGKVRKVHGWPVGNCCWGNPEDKPFTGNKQVECDYMLSALRRMELRGHLNEIYDGVIVNKTEGSAS
>NZ_CP017181.1|WP_081330956.1|2057207_2058071_+|hypothetical-protein
MSTITKERLEPAIERLEHYATNVKWTSVQAAQDMHIAADAMRRLLASLEAEPVAWLLSGGGAKNNVSFDSGNAYTDPLREVTPLYTAPPAPANAEPVAWLWSHRKHPSEVSLVRPEDDERAEGAHWSGWSCQALYAAPPAPVSVPDEVCWEDVPEEITEDDMALASAWAHGFNQCRAAMLKHSEPFIVTSDHRMMEMPQVEAINAVTAMLQGVENAETPTTMQTAPALDSSPKIAELPSGNSPVIPDGWVMVPEDPTHEMLEAGDEQFGTYDVYRRMIAASPQQEVK
>NZ_CP017181.1|WP_069601991.1|2058070_2058325_+|hypothetical-protein
MGKFTFVIEFEDGKDPPVHAHMEALGGKVVAVAFRDALSEGNPTQTITTHPQVLSEMRCFICNGKHPIGVACPLSSPSVVSHNA
>NZ_CP017181.1|WP_069601992.1|2058553_2059009_+|recombination-protein-NinB
MTLPVDGIKLHRGNFAAIGQQIQPLLDAGQCFRLQVKPWREKRSLSQNALSHMWYTEISEYLIARGKAFATPEWVKDAMKHTYLGYESKDRVDVVSGEVTTVQSLRHTAELETGEMYIFLCKVEAWAMNIGCHLTIPQSCEYQQLRDKQEA
>NZ_CP017181.1|WP_069601993.1|2059008_2059179_+|NinE-family-protein
MSTPLSRVITNEIFRVPARRKRKPAVKPSDIPTLKDYTASLVDQKWLRLAARRRHV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP017181_1	1.17\|1505012\|32\|NZ_CP017181\|CRISPRCasFinder,CRT	1505012-1505043	32	NZ_CP017181.1	2058470-2058501	1	0.969
NZ_CP017181_1	1.7\|1504410\|33\|NZ_CP017181\|PILER-CR,CRISPRCasFinder,CRT	1504410-1504442	33	NZ_CP017181.1	2939918-2939950	2	0.939

1. spacer 1.17|1505012|32|NZ_CP017181|CRISPRCasFinder,CRT matches to position: 2058470-2058501, mismatch: 1, identity: 0.969

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgc	Protospacer
***************.****************

2. spacer 1.7|1504410|33|NZ_CP017181|PILER-CR,CRISPRCasFinder,CRT matches to position: 2939918-2939950, mismatch: 2, identity: 0.939

gtgcacgttcgtgttcaacccgcagatagcgtc	CRISPR spacer
gtgcacgttcgtgttcaacccgcagatcgcatc	Protospacer
*************************** **.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017181_1	1.17\|1505012\|32\|NZ_CP017181\|CRISPRCasFinder,CRT	1505012-1505043	32	NC_016158	Escherichia phage HK639, complete genome	42334-42365	1	0.969
NZ_CP017181_1	1.17\|1505012\|32\|NZ_CP017181\|CRISPRCasFinder,CRT	1505012-1505043	32	NC_019717	Enterobacteria phage HK225, complete genome	39893-39924	1	0.969
NZ_CP017181_1	1.17\|1505012\|32\|NZ_CP017181\|CRISPRCasFinder,CRT	1505012-1505043	32	MN856003	Bacteriophage sp. isolate 1, complete genome	29088-29119	2	0.938
NZ_CP017181_1	1.6\|1504350\|32\|NZ_CP017181\|PILER-CR,CRISPRCasFinder,CRT	1504350-1504381	32	MK552327	Pseudomonas phage Psa21, complete genome	301582-301613	6	0.812
NZ_CP017181_1	1.10\|1504592\|32\|NZ_CP017181\|PILER-CR,CRISPRCasFinder,CRT	1504592-1504623	32	NZ_CP020371	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence	298996-299027	6	0.812
NZ_CP017181_1	1.16\|1504952\|32\|NZ_CP017181\|CRISPRCasFinder,CRT	1504952-1504983	32	MG969411	UNVERIFIED: Salmonella phage GE_vB_MG, complete genome	80085-80116	6	0.812
NZ_CP017181_1	1.18\|1505072\|32\|NZ_CP017181\|CRISPRCasFinder	1505072-1505103	32	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	165650-165681	7	0.781
NZ_CP017181_1	1.18\|1505072\|32\|NZ_CP017181\|CRISPRCasFinder	1505072-1505103	32	NZ_CP007214	Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence	41925-41956	7	0.781
NZ_CP017181_1	1.18\|1505072\|32\|NZ_CP017181\|CRISPRCasFinder	1505072-1505103	32	NZ_CP009433	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence	110993-111024	7	0.781
NZ_CP017181_1	1.18\|1505072\|32\|NZ_CP017181\|CRISPRCasFinder	1505072-1505103	32	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	43242-43273	7	0.781
NZ_CP017181_1	1.18\|1505072\|32\|NZ_CP017181\|CRISPRCasFinder	1505072-1505103	32	NC_012720	Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence	38668-38699	7	0.781
NZ_CP017181_1	1.18\|1505072\|32\|NZ_CP017181\|CRISPRCasFinder	1505072-1505103	32	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	87033-87064	7	0.781
NZ_CP017181_1	1.10\|1504592\|32\|NZ_CP017181\|PILER-CR,CRISPRCasFinder,CRT	1504592-1504623	32	NZ_LR536451	Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 2	43356-43387	10	0.688
NZ_CP017181_1	1.10\|1504592\|32\|NZ_CP017181\|PILER-CR,CRISPRCasFinder,CRT	1504592-1504623	32	MF668280	Mycobacterium phage Phabba, complete genome	95878-95909	10	0.688
NZ_CP017181_1	1.11\|1504652\|32\|NZ_CP017181\|PILER-CR,CRISPRCasFinder,CRT	1504652-1504683	32	NZ_CP007256	Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence	1918-1949	10	0.688
NZ_CP017181_1	1.11\|1504652\|32\|NZ_CP017181\|PILER-CR,CRISPRCasFinder,CRT	1504652-1504683	32	NZ_CP007256	Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence	86548-86579	10	0.688
NZ_CP017181_1	1.18\|1505072\|32\|NZ_CP017181\|CRISPRCasFinder	1505072-1505103	32	NC_049478	Arthrobacter phage Mufasa8, complete genome	50735-50766	10	0.688
NZ_CP017181_1	1.15\|1504892\|32\|NZ_CP017181\|PILER-CR,CRISPRCasFinder,CRT	1504892-1504923	32	NZ_CP014800	Salipiger profundus strain JLT2016 plasmid pTPRO4, complete sequence	13287-13318	11	0.656

1. spacer 1.17|1505012|32|NZ_CP017181|CRISPRCasFinder,CRT matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 1, identity: 0.969

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgc	Protospacer
***************.****************

2. spacer 1.17|1505012|32|NZ_CP017181|CRISPRCasFinder,CRT matches to NC_019717 (Enterobacteria phage HK225, complete genome) position: , mismatch: 1, identity: 0.969

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgc	Protospacer
***************.****************

3. spacer 1.17|1505012|32|NZ_CP017181|CRISPRCasFinder,CRT matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 2, identity: 0.938

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttttcacagatgc	Protospacer
***************.***** **********

4. spacer 1.6|1504350|32|NZ_CP017181|PILER-CR,CRISPRCasFinder,CRT matches to MK552327 (Pseudomonas phage Psa21, complete genome) position: , mismatch: 6, identity: 0.812

-agtcatttcaacggggccatatcaaaacgtga	CRISPR spacer
tagtc-tttcaacagagccatatcaaaaccagg	Protospacer
 **** *******.*.*************  *.

5. spacer 1.10|1504592|32|NZ_CP017181|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 6, identity: 0.812

gtcgctatg---agctgcaccggctcaacaaaaac	CRISPR spacer
---gctgtgcgcagctacaccggctcaacaacaac	Protospacer
   ***.**   ****.************** ***

6. spacer 1.16|1504952|32|NZ_CP017181|CRISPRCasFinder,CRT matches to MG969411 (UNVERIFIED: Salmonella phage GE_vB_MG, complete genome) position: , mismatch: 6, identity: 0.812

agtccgacactgtgtttccgtctgttcagtac-	CRISPR spacer
agtccgacattgtgtttcagtct-tcaagttcc	Protospacer
*********.******** **** *. *** *

7. spacer 1.18|1505072|32|NZ_CP017181|CRISPRCasFinder matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 7, identity: 0.781

gtcgcggaatacaacgacgccatctatcaata-	CRISPR spacer
ggcgcggaatacaacggcgccctct-ccgatgt	Protospacer
* **************.**** *** .*.**.

8. spacer 1.18|1505072|32|NZ_CP017181|CRISPRCasFinder matches to NZ_CP007214 (Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence) position: , mismatch: 7, identity: 0.781

gtcgcggaatacaacgacgccatctatcaata-	CRISPR spacer
ggcgcggaatacaacggcgccctct-ccgatgt	Protospacer
* **************.**** *** .*.**.

9. spacer 1.18|1505072|32|NZ_CP017181|CRISPRCasFinder matches to NZ_CP009433 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence) position: , mismatch: 7, identity: 0.781

gtcgcggaatacaacgacgccatctatcaata-	CRISPR spacer
ggcgcggaatacaacggcgccctct-ccgatgt	Protospacer
* **************.**** *** .*.**.

10. spacer 1.18|1505072|32|NZ_CP017181|CRISPRCasFinder matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 7, identity: 0.781

gtcgcggaatacaacgacgccatctatcaata-	CRISPR spacer
ggcgcggaatacaacggcgccctct-ccgatgt	Protospacer
* **************.**** *** .*.**.

11. spacer 1.18|1505072|32|NZ_CP017181|CRISPRCasFinder matches to NC_012720 (Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence) position: , mismatch: 7, identity: 0.781

gtcgcggaatacaacgacgccatctatcaata-	CRISPR spacer
ggcgcggaatacaacggcgccctct-ccgatgt	Protospacer
* **************.**** *** .*.**.

12. spacer 1.18|1505072|32|NZ_CP017181|CRISPRCasFinder matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gtcgcggaatacaacgacgccatctatcaata-	CRISPR spacer
ggcgcggaatacaacggcgccctct-ccgatgt	Protospacer
* **************.**** *** .*.**.

13. spacer 1.10|1504592|32|NZ_CP017181|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR536451 (Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 2) position: , mismatch: 10, identity: 0.688

gtcgctatgagctgcaccggctcaacaaaaac	CRISPR spacer
ttcgctatgagctgcgccggttcatggcgttc	Protospacer
 **************.****.***  . .  *

14. spacer 1.10|1504592|32|NZ_CP017181|PILER-CR,CRISPRCasFinder,CRT matches to MF668280 (Mycobacterium phage Phabba, complete genome) position: , mismatch: 10, identity: 0.688

gtcgctatgagctgcaccggctcaacaaaaac	CRISPR spacer
atcgccatgaactgcaccggctcactgccgcc	Protospacer
.****.****.************* ..  . *

15. spacer 1.11|1504652|32|NZ_CP017181|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007256 (Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence) position: , mismatch: 10, identity: 0.688

agaatcccggaggacgggatggtgttaaaact	CRISPR spacer
cacatcccggaggaccggatggtggtatcgac	Protospacer
 . ************ ******** **  . .

16. spacer 1.11|1504652|32|NZ_CP017181|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007256 (Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence) position: , mismatch: 10, identity: 0.688

agaatcccggaggacgggatggtgttaaaact	CRISPR spacer
cacatcccggaggaccggatggtggtatcgac	Protospacer
 . ************ ******** **  . .

17. spacer 1.18|1505072|32|NZ_CP017181|CRISPRCasFinder matches to NC_049478 (Arthrobacter phage Mufasa8, complete genome) position: , mismatch: 10, identity: 0.688

gtcgcggaatacaacgacgccatctatcaata	CRISPR spacer
ggcgcgggctacaacgacgccatctccacgcc	Protospacer
* *****. **************** .  ..

18. spacer 1.15|1504892|32|NZ_CP017181|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014800 (Salipiger profundus strain JLT2016 plasmid pTPRO4, complete sequence) position: , mismatch: 11, identity: 0.656

gaaaacctcctgcacggaggcgcgaaaacaga	CRISPR spacer
ccgcgcctacggcacggaggcgcgaaaaattc	Protospacer
  . .*** * *****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

883481 : 931347

uncultured_Caudovirales_phage(33.33%)

terminase,head,transposase,tail,holin,integrase

attL 923457:923471|attR 931563:931577

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045282386.1\|883481_884639_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_014882680.1\|884720_886178_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_003863205.1\|886438_886897_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_014882681.1\|887001_888246_+	esterase FrsA	NA	NA	NA	NA
WP_014882682.1\|888303_888705_+	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_063667288.1\|888818_889871_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.2e-117	60.1
WP_014882684.1\|890176_891280_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.9e-60	39.9
WP_045281951.1\|891291_892545_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.7e-92	45.1
WP_069601721.1\|892885_894058_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.6e-111	50.0
WP_024136027.1\|894054_894231_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_069601722.1\|894239_895649_-	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	7.7e-214	74.3
WP_047747099.1\|895775_896078_-	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	1.5e-26	67.1
WP_069601723.1\|896174_896390_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_069601724.1\|896400_896598_-	hypothetical protein	NA	NA	NA	NA
WP_069601725.1\|896594_896807_-	hypothetical protein	NA	NA	NA	NA
WP_069601726.1\|896812_898873_-	DNA polymerase	Q775A3	Bordetella_phage	1.1e-274	67.8
WP_069601727.1\|898950_899499_-	DUF2815 family protein	Q3LZQ2	Bacteriophage	4.2e-51	60.6
WP_069601728.1\|899514_900819_-	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	6.8e-148	60.1
WP_069601729.1\|900821_901736_-	hypothetical protein	NA	NA	NA	NA
WP_167353001.1\|902799_902946_-	hypothetical protein	NA	NA	NA	NA
WP_167353002.1\|903059_903218_-	hypothetical protein	NA	NA	NA	NA
WP_069601730.1\|903608_904301_-	helix-turn-helix transcriptional regulator	R9TNM0	Vibrio_phage	2.1e-55	48.1
WP_071978050.1\|904416_904587_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069601731.1\|904590_906759_+	replication protein	B6SCY1	Bacteriophage	7.2e-171	71.1
WP_069601732.1\|907067_907337_+	hypothetical protein	NA	NA	NA	NA
WP_069601733.1\|907349_907610_+	hypothetical protein	NA	NA	NA	NA
WP_069601734.1\|907887_908307_+	hypothetical protein	NA	NA	NA	NA
WP_015571350.1\|908320_908551_+	hypothetical protein	NA	NA	NA	NA
WP_069601735.1\|908554_910180_+\|head,tail	head-tail connector protein	A0A2H4J3N6	uncultured_Caudovirales_phage	5.3e-166	57.9
WP_069601736.1\|910176_910410_+	hypothetical protein	NA	NA	NA	NA
WP_069601737.1\|910396_911233_+	hypothetical protein	A0A2H4JEQ5	uncultured_Caudovirales_phage	1.3e-46	42.9
WP_069601738.1\|911266_911767_+	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	7.7e-52	61.1
WP_069601739.1\|912011_912923_+	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	1.3e-41	37.2
WP_069601740.1\|912980_913544_+	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	9.6e-51	52.4
WP_069601741.1\|913545_915534_+	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	4.9e-190	49.8
WP_069601742.1\|915535_915985_+	GNAT family N-acetyltransferase	A0A2H4J9Z5	uncultured_Caudovirales_phage	2.3e-23	43.0
WP_069601743.1\|915987_916455_+	hypothetical protein	NA	NA	NA	NA
WP_069601744.1\|916457_919166_+	transglycosylase SLT domain-containing protein	G9L6D3	Escherichia_phage	0.0e+00	63.0
WP_069601745.1\|919165_922054_+	hypothetical protein	G9L6D4	Escherichia_phage	0.0e+00	70.9
WP_069601746.1\|922118_922460_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	1.7e-18	49.1
WP_069601747.1\|922456_924067_+\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	1.6e-223	69.9
923457:923471	attL	NA	NA	NA	NA
WP_069601748.1\|924087_926376_+	hypothetical protein	A0A0F6TJC8	Escherichia_coli_O157_typing_phage	4.9e-61	34.1
WP_069601749.1\|926380_927502_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	4.8e-17	25.8
WP_069602464.1\|927682_927913_+\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	2.9e-22	71.0
WP_069601750.1\|927893_928433_+	lysozyme	H6WRZ4	Salmonella_phage	5.7e-93	89.3
WP_069601751.1\|928429_928789_+	hypothetical protein	R9TPM9	Aeromonas_phage	6.4e-16	46.4
WP_164981154.1\|929623_929782_+	hypothetical protein	NA	NA	NA	NA
WP_158008542.1\|930305_930578_-	hypothetical protein	NA	NA	NA	NA
WP_069602465.1\|930574_930781_-	hypothetical protein	NA	NA	NA	NA
WP_069602466.1\|930786_931347_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
931563:931577	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1144264 : 1196938

Escherichia_phage(27.27%)

holin,integrase,transposase

attL 1178269:1178285|attR 1210241:1210257

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032637327.1\|1144264_1145245_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1
WP_000019445.1\|1146819_1147800_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_014882854.1\|1148299_1148662_-	GtrA family protein	B9UDL8	Salmonella_phage	4.7e-43	66.7
WP_069601790.1\|1149201_1150335_-	acyltransferase	A0A088CPR9	Enterobacteria_phage	3.9e-35	30.9
WP_023336848.1\|1151313_1152534_+	cytochrome P450	NA	NA	NA	NA
WP_014882857.1\|1152866_1153883_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_023332289.1\|1153907_1155482_+	iron ABC transporter permease	NA	NA	NA	NA
WP_069601791.1\|1155483_1156506_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.5e-21	34.7
WP_023332291.1\|1156683_1158867_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_023332292.1\|1158994_1160968_+	PhoX family phosphatase	NA	NA	NA	NA
WP_023332293.1\|1161070_1162459_+	phenylalanine transporter	NA	NA	NA	NA
WP_069601792.1\|1162569_1162869_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023332294.1\|1162856_1163219_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_023332295.1\|1163424_1164660_+	MFS transporter	NA	NA	NA	NA
WP_059372448.1\|1164675_1165701_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_069601793.1\|1165693_1166836_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_047626963.1\|1166911_1167883_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.5e-24	31.9
WP_014882869.1\|1167883_1169128_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_059372453.1\|1169194_1170631_-	MFS transporter	NA	NA	NA	NA
WP_059372456.1\|1170738_1171608_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069601794.1\|1171761_1172364_+	hypothetical protein	NA	NA	NA	NA
WP_014882873.1\|1172391_1173045_-	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA
WP_014882874.1\|1173165_1173534_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_014882875.1\|1173523_1174114_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_023332301.1\|1174304_1175408_+	RomA family MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_014882877.1\|1175440_1175782_+	RamA family antibiotic efflux transcriptional regulator	NA	NA	NA	NA
WP_014882878.1\|1175839_1176088_-	DUF1158 domain-containing protein	NA	NA	NA	NA
WP_032637327.1\|1176554_1177535_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1
WP_014882920.1\|1177731_1178205_+	cold shock domain-containing protein	NA	NA	NA	NA
1178269:1178285	attL	NA	NA	NA	NA
WP_014882921.1\|1178313_1179018_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.6e-21	35.9
WP_063943401.1\|1179004_1179841_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.8e-14	30.9
WP_069601795.1\|1179833_1180667_-	ABC transporter permease	NA	NA	NA	NA
WP_069601796.1\|1180666_1181680_-	ABC transporter permease	NA	NA	NA	NA
WP_069601797.1\|1181777_1183334_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_047027608.1\|1183546_1184245_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069601798.1\|1184278_1185973_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
WP_014882927.1\|1186006_1186747_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_047027606.1\|1187021_1187669_-	anti-sigma factor	NA	NA	NA	NA
WP_023332333.1\|1187665_1188220_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_069601799.1\|1188263_1188827_-	fasciclin domain-containing protein	NA	NA	NA	NA
WP_069601800.1\|1188977_1190642_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.9e-62	31.8
WP_069601801.1\|1190655_1192128_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_014882933.1\|1192141_1192729_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_023336880.1\|1192857_1194891_+\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	9.9e-21	27.3
WP_069601802.1\|1195027_1195420_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_069601803.1\|1195416_1195701_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_045282386.1\|1195780_1196938_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
1210241:1210257	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1563330 : 1662088

101

Enterobacterial_phage(26.53%)

portal,terminase,head,tail,tRNA,holin,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014883226.1\|1563330_1564110_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_014883227.1\|1564113_1565436_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_008499954.1\|1565416_1566121_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_069601861.1\|1566120_1570572_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_023332553.1\|1570750_1572574_+	L,D-transpeptidase	NA	NA	NA	NA
WP_014883230.1\|1572749_1573301_+	YcbK family protein	NA	NA	NA	NA
WP_023332554.1\|1573321_1573969_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_014883232.1\|1574021_1575212_-	aspartate transaminase	NA	NA	NA	NA
WP_072093609.1\|1575396_1576500_-	porin	Q1MVN1	Enterobacteria_phage	1.4e-98	52.5
WP_014883234.1\|1577109_1578510_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	1.4e-79	35.9
WP_059373113.1\|1578675_1579878_-	nicotinate phosphoribosyltransferase	A0A2L0UZQ6	Agrobacterium_phage	3.8e-44	31.4
WP_069601862.1\|1580062_1581355_-	DUF3596 domain-containing protein	S4TSP2	Salmonella_phage	6.5e-244	95.6
WP_045261754.1\|1581399_1581657_-	excisionase family protein	S4TND0	Salmonella_phage	5.2e-36	88.8
WP_062939324.1\|1581640_1582012_-	hypothetical protein	NA	NA	NA	NA
WP_044596884.1\|1582026_1582605_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	8.3e-74	67.7
WP_023062998.1\|1582604_1583018_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	6.4e-44	64.0
WP_006811080.1\|1583207_1583615_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	2.7e-47	87.5
WP_006811079.1\|1583607_1583832_-	hypothetical protein	NA	NA	NA	NA
WP_069601863.1\|1583938_1584325_-	S24 family peptidase	F1C5A0	Cronobacter_phage	6.4e-38	60.8
WP_006811077.1\|1584391_1584823_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_102135191.1\|1584998_1585784_-	helix-turn-helix transcriptional regulator	E7C9R0	Salmonella_phage	3.9e-34	35.6
WP_071978052.1\|1585833_1586064_+	transcriptional regulator	NA	NA	NA	NA
WP_069602470.1\|1586089_1586386_+	transcriptional regulator	NA	NA	NA	NA
WP_069601864.1\|1586382_1587294_+	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	1.9e-93	67.8
WP_069601865.1\|1587309_1588191_+	ATP-binding protein	Q8W641	Enterobacteria_phage	9.7e-82	63.3
WP_069601866.1\|1588187_1589567_+	AAA family ATPase	Q8W640	Enterobacteria_phage	1.1e-172	67.9
WP_069601867.1\|1589594_1590431_+	antitermination protein	A0A1B5FPA5	Escherichia_phage	2.8e-123	78.1
WP_016240226.1\|1590539_1591490_-	hypothetical protein	NA	NA	NA	NA
WP_122008274.1\|1592679_1592985_+\|holin	phage holin family protein	E7C9S8	Salmonella_phage	1.1e-43	86.1
WP_058660492.1\|1592971_1593412_+	lysozyme	A0A0M4R365	Salmonella_phage	2.4e-49	69.1
WP_058660491.1\|1593408_1593795_+	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	1.9e-13	40.9
WP_069601868.1\|1594074_1594698_+	DUF1983 domain-containing protein	G8C7Q4	Escherichia_phage	3.9e-85	76.8
WP_044901840.1\|1594708_1594936_+	hypothetical protein	NA	NA	NA	NA
WP_047363385.1\|1594953_1596411_+	glycosyl transferase	K7PKP3	Enterobacterial_phage	1.0e-269	89.3
WP_047363387.1\|1596392_1596590_+	hypothetical protein	NA	NA	NA	NA
WP_064138306.1\|1597220_1597811_+	hypothetical protein	K7P6K4	Enterobacteria_phage	2.3e-103	93.1
WP_042863315.1\|1597807_1598149_+	HNH endonuclease	K7PM05	Enterobacterial_phage	3.9e-63	98.2
WP_042863313.1\|1598148_1598385_+	hypothetical protein	K7PHC8	Enterobacterial_phage	6.2e-28	80.8
WP_033146302.1\|1598534_1599020_+	hypothetical protein	K7PGU7	Enterobacterial_phage	3.9e-77	93.8
WP_069601869.1\|1599026_1600541_+\|terminase	terminase large subunit	K7PLY2	Enterobacterial_phage	4.7e-294	99.8
WP_069601870.1\|1600540_1601815_+\|portal	phage portal protein	F1C584	Cronobacter_phage	3.1e-246	98.3
WP_016063561.1\|1601832_1602510_+\|head,protease	HK97 family phage prohead protease	K7PKL4	Enterobacterial_phage	2.4e-125	100.0
WP_045626368.1\|1602512_1603670_+\|capsid	phage major capsid protein	Q77WA0	Escherichia_phage	8.0e-209	97.4
WP_016063563.1\|1603703_1604030_+\|head,tail	phage head-tail connector protein	K7PGU9	Enterobacterial_phage	2.6e-56	100.0
WP_045626370.1\|1604029_1604368_+\|head	phage head closure protein	K7P7L2	Enterobacteria_phage	5.4e-57	96.4
WP_069601871.1\|1604364_1604814_+	HK97 gp10 family phage protein	K7PH84	Enterobacterial_phage	1.3e-74	98.0
WP_069601872.1\|1604810_1605158_+	DUF3168 domain-containing protein	A0A220NRP0	Escherichia_phage	5.5e-57	96.5
WP_069601873.1\|1605212_1605683_+\|tail	phage tail protein	K7P6W3	Enterobacteria_phage	7.4e-81	98.1
WP_069601874.1\|1605737_1606139_+\|tail	phage tail assembly chaperone	K7PGV0	Enterobacterial_phage	1.2e-68	98.5
WP_069601875.1\|1606162_1606426_+	DUF4035 domain-containing protein	K7PLY6	Enterobacterial_phage	3.8e-42	98.9
WP_069601876.1\|1606460_1609742_+\|tail	phage tail tape measure protein	A0A220NRN7	Escherichia_phage	0.0e+00	97.9
WP_032624419.1\|1609744_1610083_+\|tail	phage tail protein	K7PKL8	Enterobacterial_phage	4.3e-62	97.3
WP_069601877.1\|1610079_1610838_+\|tail	phage minor tail protein L	G8C7J7	Escherichia_phage	2.0e-144	97.2
WP_057992072.1\|1610839_1611550_+	C40 family peptidase	K7PGV2	Enterobacterial_phage	2.5e-144	96.6
WP_137984529.1\|1611582_1611825_+	hypothetical protein	NA	NA	NA	NA
WP_069601879.1\|1612142_1612751_+\|tail	tail assembly protein	K7P6S9	Enterobacteria_phage	6.2e-88	83.2
WP_069601880.1\|1612804_1616635_+	DUF1983 domain-containing protein	Q9MCR7	Enterobacteria_phage	0.0e+00	83.6
WP_069601881.1\|1616639_1617605_+	hypothetical protein	G1CSU0	Cronobacter_virus	3.7e-58	39.7
WP_137984556.1\|1618223_1618802_+\|tail	tail fiber domain-containing protein	A0A2I6PD03	Escherichia_phage	2.7e-32	53.7
WP_069602471.1\|1618932_1619199_-	DinI family protein	K7PKM2	Enterobacterial_phage	4.0e-39	93.2
WP_069601882.1\|1619623_1622236_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	7.0e-19	22.2
WP_069601883.1\|1622337_1623108_-	aliphatic sulfonates ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-28	37.1
WP_069601884.1\|1623104_1623896_-	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA
WP_032637061.1\|1623905_1625051_-	FMNH2-dependent alkanesulfonate monooxygenase	NA	NA	NA	NA
WP_069601885.1\|1625047_1626010_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014883241.1\|1626002_1626578_-	NADPH-dependent FMN reductase	NA	NA	NA	NA
WP_014883242.1\|1626827_1627838_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_050862060.1\|1628003_1628546_+	cell division protein ZapC	NA	NA	NA	NA
WP_069601886.1\|1628542_1629652_-	YcbX family protein	V5UTY8	Synechococcus_phage	4.1e-05	39.1
WP_023332608.1\|1629750_1631859_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_069601887.1\|1631871_1633779_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	6.2e-49	28.1
WP_014883247.1\|1633792_1635046_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_069601888.1\|1635050_1636691_+	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_069601889.1\|1636687_1637254_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_013097261.1\|1637510_1637678_+	ribosome modulation factor	NA	NA	NA	NA
WP_000227926.1\|1637749_1638268_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_069601890.1\|1638336_1640097_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_023332611.1\|1640283_1640736_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_014883252.1\|1640800_1641856_-	porin OmpA	NA	NA	NA	NA
WP_014883253.1\|1642211_1642721_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_069601891.1\|1642935_1643565_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_023332614.1\|1643521_1645684_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_014883256.1\|1645703_1646150_-	YccF domain-containing protein	NA	NA	NA	NA
WP_069601892.1\|1646273_1648328_+	DNA helicase IV	A7KV33	Bacillus_phage	3.9e-17	27.4
WP_008499922.1\|1648386_1648845_-	methylglyoxal synthase	NA	NA	NA	NA
WP_023332617.1\|1648925_1649588_-	DUF2057 family protein	NA	NA	NA	NA
WP_014883259.1\|1649761_1650175_+	CoA-binding protein	NA	NA	NA	NA
WP_008499919.1\|1650211_1650529_-	heat shock protein HspQ	NA	NA	NA	NA
WP_045134648.1\|1650589_1651780_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_032637048.1\|1651954_1652512_+	kinase inhibitor	NA	NA	NA	NA
WP_045134647.1\|1652522_1653311_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045281283.1\|1653322_1653604_+	acylphosphatase	NA	NA	NA	NA
WP_008499913.1\|1653600_1653930_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_023332622.1\|1653999_1654551_-	response regulator transcription factor	NA	NA	NA	NA
WP_069601893.1\|1654561_1655719_-\|tail	phage tail protein	NA	NA	NA	NA
WP_069601894.1\|1655720_1658438_-	TcfC E-set like domain-containing protein	NA	NA	NA	NA
WP_023332625.1\|1658510_1659017_-	fimbrial protein	NA	NA	NA	NA
WP_069601895.1\|1659092_1659836_-	fimbrial protein	NA	NA	NA	NA
WP_023332627.1\|1660144_1660900_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_045134644.1\|1660896_1661373_+	hypothetical protein	NA	NA	NA	NA
WP_013097244.1\|1661428_1662088_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	8.9e-48	54.9

DBSCAN-SWA_4

1828611 : 1838895

Enterobacteria_phage(27.27%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069601924.1\|1828611_1829898_-	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	7.0e-113	49.9
WP_023343778.1\|1829897_1830113_-	excisionase family protein	A0A0U2RY08	Escherichia_phage	1.2e-17	54.9
WP_069601925.1\|1830174_1830414_-	DUF4060 family protein	M9P0E0	Enterobacteria_phage	3.3e-16	56.6
WP_069601926.1\|1830400_1832305_-	exodeoxyribonuclease VIII	S4TNL0	Salmonella_phage	1.2e-25	32.8
WP_047625949.1\|1832526_1832799_-	hypothetical protein	K7P7B3	Enterobacteria_phage	1.4e-15	43.2
WP_131774834.1\|1832866_1833052_-	hypothetical protein	NA	NA	NA	NA
WP_047625950.1\|1833380_1833800_-	helix-turn-helix domain-containing protein	K7PM82	Enterobacteria_phage	2.9e-12	53.1
WP_044865494.1\|1833877_1834090_+	Cro/Cl family transcriptional regulator	H9C161	Pectobacterium_phage	4.6e-06	43.4
WP_058648178.1\|1834089_1834542_+	hypothetical protein	NA	NA	NA	NA
WP_072203033.1\|1834564_1835482_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	9.2e-51	40.3
WP_069601927.1\|1835484_1836225_+	ATP-binding protein	H6WRX8	Salmonella_phage	3.6e-98	71.9
WP_069601928.1\|1836242_1836902_+	DUF1627 domain-containing protein	A0A088CE47	Shigella_phage	2.2e-14	30.0
WP_069601929.1\|1837173_1838895_-	AIPR family protein	D0UIM0	Aggregatibacter_phage	1.4e-55	28.8

DBSCAN-SWA_5

2040998 : 2120970

Escherichia_phage(46.15%)

terminase,lysis,tail,coat,holin,integrase,protease

attL 2033168:2033184|attR 2055609:2055625

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2033168:2033184	attL	NA	NA	NA	NA
WP_069601975.1\|2040998_2042279_-\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	1.1e-123	51.2
WP_022650951.1\|2042311_2042560_-	excisionase family protein	S4TND0	Salmonella_phage	8.3e-15	50.0
WP_069601976.1\|2042589_2043216_-	Eac protein	A0A220NQT7	Salmonella_phage	2.6e-97	80.7
WP_137984531.1\|2043225_2043381_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	8.8e-15	78.0
WP_081330955.1\|2043430_2045437_-	phage N-6-adenine-methyltransferase	A0A1B0V7P0	Salmonella_phage	9.4e-141	51.9
WP_167353005.1\|2045433_2045598_-	hypothetical protein	G8C7S7	Escherichia_phage	2.7e-22	96.2
WP_069601977.1\|2045594_2046023_-	regulator	M9NYX4	Enterobacteria_phage	9.8e-72	94.4
WP_069601978.1\|2046019_2046637_-	YqaJ viral recombinase family protein	A0A0S2SY31	Pseudomonas_phage	1.1e-58	56.9
WP_032621589.1\|2046633_2047380_-	phage recombination protein Bet	A0A0M4RD39	Salmonella_phage	1.8e-65	65.8
WP_069601979.1\|2047398_2047683_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.5e-47	93.6
WP_058657563.1\|2047755_2047965_-	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	5.7e-33	94.2
WP_069601980.1\|2047961_2048120_-	hypothetical protein	G8C7T3	Escherichia_phage	3.5e-19	88.2
WP_069601981.1\|2048116_2048323_-	hypothetical protein	A0A1L2C975	Pseudomonas_phage	5.0e-05	44.6
WP_026080591.1\|2049521_2049719_+	hypothetical protein	G8C7T7	Escherichia_phage	1.8e-25	96.9
WP_023306034.1\|2049856_2050765_-	hypothetical protein	NA	NA	NA	NA
WP_069601983.1\|2050877_2051537_-	helix-turn-helix domain-containing protein	F1C599	Cronobacter_phage	1.2e-71	65.6
WP_022650973.1\|2051645_2051864_+	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	1.9e-10	47.0
WP_069601984.1\|2051894_2052440_+	hypothetical protein	K7P7P2	Enterobacteria_phage	2.5e-96	98.9
WP_015571544.1\|2052523_2052670_+	hypothetical protein	NA	NA	NA	NA
WP_063944937.1\|2052662_2053562_+	hypothetical protein	A0A0N7C1Z7	Escherichia_phage	8.4e-81	55.0
WP_069601985.1\|2053551_2054985_+	AAA family ATPase	Q716D2	Shigella_phage	3.7e-232	87.1
WP_069601986.1\|2054984_2055284_+	protein ren	O48423	Enterobacteria_phage	2.8e-17	51.6
WP_069601987.1\|2055280_2055577_+	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	2.4e-29	65.2
WP_069601988.1\|2056028_2056232_+	hypothetical protein	R9TRD3	Aeromonas_phage	1.2e-22	78.1
2055609:2055625	attR	NA	NA	NA	NA
WP_069601989.1\|2056228_2056693_+	hypothetical protein	K7PJQ4	Enterobacteria_phage	1.8e-50	85.8
WP_069601990.1\|2056695_2057211_+	hypothetical protein	G9L6B3	Escherichia_phage	1.9e-93	90.1
WP_081330956.1\|2057207_2058071_+	hypothetical protein	G8C7V0	Escherichia_phage	3.9e-35	42.3
WP_069601991.1\|2058070_2058325_+	hypothetical protein	A0A1B0V7L5	Salmonella_phage	3.8e-07	42.1
WP_069601992.1\|2058553_2059009_+	recombination protein NinB	I6PD71	Cronobacter_phage	3.5e-59	65.6
WP_069601993.1\|2059008_2059179_+	NinE family protein	K7P7K0	Enterobacteria_phage	5.3e-21	94.4
WP_069601994.1\|2059171_2059819_+	recombination protein NinG	S4TSR3	Salmonella_phage	2.1e-78	68.4
WP_045281515.1\|2059815_2060457_+	HNH endonuclease	A0A2I7QND8	Vibrio_phage	4.3e-39	46.0
WP_045418805.1\|2060453_2060654_+	hypothetical protein	NA	NA	NA	NA
WP_069601995.1\|2060756_2061578_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.1e-108	76.2
WP_069601996.1\|2061688_2061973_-	hypothetical protein	NA	NA	NA	NA
WP_069601997.1\|2062185_2062527_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.4e-28	53.3
WP_137984532.1\|2062510_2062954_+	lysozyme	A0A0M4R365	Salmonella_phage	1.4e-49	69.1
WP_069601999.1\|2062950_2063424_+\|lysis	lysis protein	Q8HA85	Salmonella_phage	9.3e-39	54.7
WP_006811069.1\|2063613_2064300_+	Rha family transcriptional regulator	I6R9D7	Salmonella_phage	8.0e-124	99.1
WP_069602001.1\|2064984_2065635_+	hypothetical protein	G8C7P2	Escherichia_phage	3.2e-90	79.6
WP_069602002.1\|2065631_2067203_+\|terminase	terminase	G8C7P3	Escherichia_phage	0.0e+00	95.6
WP_069602003.1\|2067207_2068611_+	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	2.6e-254	95.9
WP_069602004.1\|2068612_2069716_+	hypothetical protein	G8C7P5	Escherichia_phage	7.9e-190	90.7
WP_069602005.1\|2069841_2070594_+	hypothetical protein	G8C7P6	Escherichia_phage	3.9e-124	92.8
WP_137984533.1\|2070590_2071331_-	hypothetical protein	A0A2I2MUH3	uncultured_Caudovirales_phage	3.6e-37	47.6
WP_069602007.1\|2071443_2072577_+\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	2.4e-173	83.8
WP_069602008.1\|2072616_2072802_+	hypothetical protein	G8C7P8	Escherichia_phage	1.4e-27	98.4
WP_069602009.1\|2072804_2073287_+	hypothetical protein	G8C7P9	Escherichia_phage	1.5e-81	92.5
WP_069602010.1\|2073288_2073642_+	hypothetical protein	G8C7Q0	Escherichia_phage	3.5e-51	87.9
WP_069602011.1\|2073644_2074244_+	hypothetical protein	G8C7Q1	Escherichia_phage	1.1e-97	88.4
WP_069602012.1\|2074233_2074680_+	DUF4128 domain-containing protein	G8C7Q2	Escherichia_phage	8.7e-71	90.6
WP_069602013.1\|2074726_2075659_+\|tail	phage tail protein	G8C7Q3	Escherichia_phage	1.8e-166	99.0
WP_048986151.1\|2075701_2076037_+	hypothetical protein	S4TTH3	Salmonella_phage	2.0e-40	72.1
WP_081330982.1\|2076384_2076990_+	DUF1983 domain-containing protein	G8C7Q4	Escherichia_phage	1.0e-29	51.2
WP_069602015.1\|2077055_2077394_+	hypothetical protein	G8C7Q5	Escherichia_phage	5.0e-55	95.5
WP_022651625.1\|2077411_2077699_+	DUF1799 domain-containing protein	I6PD79	Cronobacter_phage	9.3e-18	61.5
WP_069602016.1\|2077698_2080929_+\|tail	phage tail tape measure protein	G8C7Q6	Escherichia_phage	4.3e-196	43.8
WP_158008543.1\|2081420_2081717_+	hypothetical protein	A0A2I7RH26	Vibrio_phage	6.5e-06	44.1
WP_023622600.1\|2081788_2082139_+\|tail	phage tail protein	G8C7R0	Escherichia_phage	1.8e-55	93.1
WP_069602019.1\|2082138_2082909_+\|tail	phage minor tail protein L	G8C7R1	Escherichia_phage	6.8e-140	93.4
WP_069602020.1\|2082921_2083653_+	C40 family peptidase	G8C7R2	Escherichia_phage	9.0e-150	96.7
WP_022651619.1\|2083640_2084240_+\|tail	tail assembly protein	G8C7R3	Escherichia_phage	3.1e-100	95.0
WP_069602021.1\|2084295_2088150_+	DUF1983 domain-containing protein	G8C7R4	Escherichia_phage	0.0e+00	75.3
WP_032636937.1\|2088154_2089120_+	hypothetical protein	G1CSU0	Cronobacter_virus	4.8e-58	39.7
WP_137984559.1\|2089738_2090317_+\|tail	tail fiber domain-containing protein	A0A2I6PD03	Escherichia_phage	2.7e-32	53.7
WP_069602022.1\|2090447_2090714_-	DinI family protein	K7PKM2	Enterobacterial_phage	1.8e-39	94.3
WP_069602023.1\|2090813_2091053_+	hypothetical protein	K7P7N3	Enterobacteria_phage	3.3e-37	92.3
WP_069602024.1\|2091052_2091370_+	hypothetical protein	K7PGV5	Enterobacterial_phage	3.2e-19	47.1
WP_069602025.1\|2091881_2092910_+	Mal regulon transcriptional regulator MalI	NA	NA	NA	NA
WP_023337197.1\|2093014_2094547_-	YdgA family protein	NA	NA	NA	NA
WP_069602026.1\|2094646_2095822_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_014883590.1\|2096021_2097668_+	fumarate hydratase	NA	NA	NA	NA
WP_069602027.1\|2097851_2099246_+	class II fumarate hydratase	NA	NA	NA	NA
WP_050862540.1\|2099246_2100176_-	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_063943061.1\|2100249_2101548_-	two-component system sensor histidine kinase RstB	W8CYF6	Bacillus_phage	3.6e-16	24.5
WP_014883594.1\|2101623_2101884_-	hypothetical protein	NA	NA	NA	NA
WP_032636775.1\|2102121_2102838_-	two-component system response regulator RstA	NA	NA	NA	NA
WP_014883596.1\|2102966_2103302_+	GlpM family protein	NA	NA	NA	NA
WP_014883597.1\|2103298_2104021_-	dihydromonapterin reductase	NA	NA	NA	NA
WP_023330267.1\|2104061_2105444_-	amino acid permease	NA	NA	NA	NA
WP_014883599.1\|2105629_2106574_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_023330268.1\|2107109_2108639_+	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_023330269.1\|2108649_2110038_+	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
WP_069602028.1\|2110145_2111255_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_059371920.1\|2112974_2114411_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_023330279.1\|2114506_2115274_+	arylamine N-acetyltransferase	NA	NA	NA	NA
WP_006808895.1\|2115324_2115672_-	HNH nuclease family protein	NA	NA	NA	NA
WP_014883618.1\|2115749_2116643_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_069602030.1\|2116838_2117864_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_069602031.1\|2117974_2119009_-	AI-2E family transporter	NA	NA	NA	NA
WP_014883621.1\|2119431_2119794_+	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_069602032.1\|2119780_2120110_+	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_045282037.1\|2120148_2120970_-\|protease	serine protease	NA	NA	NA	NA

DBSCAN-SWA_6

2159984 : 2176370

Escherichia_phage(40.0%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069602043.1\|2159984_2162423_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	7.5e-217	49.2
WP_069602044.1\|2162554_2162848_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_069602045.1\|2162954_2163665_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_014883673.1\|2163765_2164326_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_008502414.1\|2164325_2164664_-	DUF1283 family protein	NA	NA	NA	NA
WP_137984535.1\|2164959_2166030_+	D-galactonate dehydratase family protein	G8C7R0	Escherichia_phage	3.4e-36	90.5
WP_069602046.1\|2166029_2166800_+\|tail	phage minor tail protein L	G8C7R1	Escherichia_phage	2.1e-141	94.1
WP_137984560.1\|2167088_2167451_+\|tail	tail fiber domain-containing protein	A0A2I6PD03	Escherichia_phage	7.4e-28	59.8
WP_069602022.1\|2167581_2167848_-	DinI family protein	K7PKM2	Enterobacterial_phage	1.8e-39	94.3
WP_069602049.1\|2168173_2168590_+	DNA polymerase V	K7P6F7	Enterobacteria_phage	9.6e-64	92.2
WP_069602050.1\|2170204_2171668_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	5.1e-43	29.4
WP_014883679.1\|2171711_2171915_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	3.4e-14	58.2
WP_014883680.1\|2172203_2172635_+	universal stress protein	A0A1W6JNV4	Morganella_phage	9.7e-19	37.2
WP_014883681.1\|2172669_2173356_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_069602051.1\|2173447_2174194_-	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_045282057.1\|2174336_2176370_+	peptidyl-dipeptidase Dcp	A0A1V0SIU1	Klosneuvirus	1.2e-18	21.7

DBSCAN-SWA_7

2582977 : 2651511

Escherichia_phage(31.82%)

portal,terminase,transposase,head,lysis,tail,holin,integrase,protease,plate,capsid

attL 2637392:2637410|attR 2653837:2653855

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014884092.1\|2582977_2584024_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	2.8e-19	28.7
WP_014884093.1\|2584275_2585037_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.8e-07	23.0
WP_069602129.1\|2585033_2585624_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_014884095.1\|2585659_2586538_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_003856793.1\|2586634_2587255_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_069602130.1\|2587251_2588133_-	5'-3' exoribonuclease	NA	NA	NA	NA
WP_106993556.1\|2588272_2588317_+	trp operon leader peptide	NA	NA	NA	NA
WP_069602131.1\|2588413_2589976_+	anthranilate synthase component 1	NA	NA	NA	NA
WP_014884098.1\|2589975_2591571_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	7.2e-51	37.3
WP_014884099.1\|2591574_2592933_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.3e-36	40.6
WP_014884100.1\|2592943_2594137_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_014884101.1\|2594136_2594946_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_023330557.1\|2595212_2596469_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_014884103.1\|2596623_2596836_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	8.4e-24	80.6
WP_032629007.1\|2597328_2597934_+	hypothetical protein	NA	NA	NA	NA
WP_014884106.1\|2597997_2598657_-	DsbA family protein	NA	NA	NA	NA
WP_014884107.1\|2598786_2599266_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_014884108.1\|2599406_2600228_+	alpha/beta hydrolase	A0A1D8EW21	Mycobacterium_phage	3.7e-11	25.3
WP_069602132.1\|2600304_2601072_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_069602133.1\|2601326_2602346_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_069602134.1\|2602445_2603225_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_069602135.1\|2603462_2604011_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_023338394.1\|2604188_2605400_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_014884113.1\|2605396_2605630_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_154816661.1\|2605824_2605995_-	hypothetical protein	NA	NA	NA	NA
WP_014884115.1\|2606140_2606773_-	outer membrane protein OmpW	NA	NA	NA	NA
WP_014884116.1\|2607054_2607459_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_014884117.1\|2607484_2608228_+	UPF0259 family protein	NA	NA	NA	NA
WP_014884118.1\|2608286_2608826_+	septation protein A	NA	NA	NA	NA
WP_008502796.1\|2608930_2609326_+	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA
WP_045135474.1\|2609361_2610084_-	TonB system transport protein TonB	NA	NA	NA	NA
WP_069602484.1\|2610173_2611745_+	recombinase family protein	NA	NA	NA	NA
WP_004898926.1\|2612084_2612582_+	PH domain-containing protein	A0A249Y2R5	Serratia_phage	3.1e-16	33.3
WP_042947327.1\|2612792_2613416_+	recombinase family protein	NA	NA	NA	NA
WP_012967828.1\|2613746_2614109_+\|protease	protease inhibitor I42 family protein	NA	NA	NA	NA
WP_069602136.1\|2614101_2614473_-	hypothetical protein	NA	NA	NA	NA
WP_137984538.1\|2615740_2615995_+	hypothetical protein	NA	NA	NA	NA
WP_000019445.1\|2616033_2617014_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_012967825.1\|2618567_2618744_+	hypothetical protein	NA	NA	NA	NA
WP_023330569.1\|2619230_2619527_+	YciI family protein	NA	NA	NA	NA
WP_069602139.1\|2619699_2621007_-	CHAT domain-containing protein	A0A291AWU0	Escherichia_phage	1.5e-163	64.7
WP_000019445.1\|2621005_2621986_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_069602140.1\|2623115_2623337_-	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	3.9e-24	71.4
WP_014884123.1\|2623413_2624583_-	phage late control D family protein	Q6K1G4	Salmonella_virus	2.5e-162	75.4
WP_069602141.1\|2624579_2625044_-\|tail	phage tail protein	A0A218M4I2	Erwinia_phage	3.2e-60	70.8
WP_069602142.1\|2625056_2627504_-\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	1.4e-303	76.4
WP_000763321.1\|2627493_2627616_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	5.0e-13	89.7
WP_014884126.1\|2627648_2627957_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.4e-27	73.6
WP_069602143.1\|2628017_2628536_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	6.5e-78	80.2
WP_069602144.1\|2628548_2629742_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	8.0e-188	82.1
WP_023333113.1\|2629864_2630269_-\|tail	tail fiber assembly protein	U5P083	Shigella_phage	1.7e-25	45.5
WP_069602145.1\|2630280_2632332_-\|tail	phage tail protein	U5N099	Enterobacteria_phage	4.2e-88	78.6
WP_069602146.1\|2632343_2632874_-\|tail	phage tail protein I	Q37841	Escherichia_phage	1.8e-91	87.5
WP_069602147.1\|2632866_2633775_-\|plate	baseplate assembly protein	Q6K1H4	Salmonella_virus	3.7e-137	82.8
WP_069602148.1\|2633780_2634131_-	GPW/gp25 family protein	A0A0M4RE59	Salmonella_phage	1.5e-38	70.7
WP_069602149.1\|2634127_2634769_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	1.6e-97	83.1
WP_069602150.1\|2634957_2636142_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_069602151.1\|2636181_2636634_-	phage virion morphogenesis protein	O80313	Escherichia_phage	2.1e-48	69.4
WP_069602152.1\|2636626_2637094_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	2.9e-61	71.6
WP_081330962.1\|2637056_2637302_-\|holin	holin	S4TNY4	Salmonella_phage	8.5e-28	75.3
WP_069602153.1\|2637189_2637615_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	1.0e-44	69.3
2637392:2637410	attL	NA	NA	NA	NA
WP_069602154.1\|2637611_2638121_-	lysozyme	A0A218M4K3	Erwinia_phage	3.2e-77	85.7
WP_001354073.1\|2638104_2638326_-	hypothetical protein	A0A218M4L5	Erwinia_phage	1.4e-26	75.3
WP_069602155.1\|2638316_2638520_-\|tail	tail protein X	A0A218M4L8	Erwinia_phage	3.6e-24	76.1
WP_069602156.1\|2638519_2639026_-\|head	head completion/stabilization protein	O80306	Escherichia_phage	4.1e-61	70.8
WP_069602157.1\|2639125_2639875_-\|terminase	terminase endonuclease subunit	O80305	Escherichia_phage	1.2e-77	71.6
WP_069602158.1\|2639878_2640946_-\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	1.4e-170	83.3
WP_069602159.1\|2641001_2641856_-\|capsid	GPO family capsid scaffolding protein	A0A218M4L9	Erwinia_phage	3.8e-115	72.5
WP_069602160.1\|2642023_2643793_+\|terminase	terminase ATPase subunit family protein	Q9T0R3	Escherichia_phage	3.9e-300	84.7
WP_069602161.1\|2643794_2644820_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	1.8e-167	83.3
WP_032609409.1\|2645176_2645731_-	hypothetical protein	NA	NA	NA	NA
WP_032609411.1\|2645878_2646163_-	hypothetical protein	NA	NA	NA	NA
WP_069602162.1\|2646159_2648457_-	replication endonuclease	Q858T4	Yersinia_virus	0.0e+00	72.9
WP_045630572.1\|2648458_2648722_-	DUF5405 family protein	U5N3W1	Enterobacteria_phage	3.3e-22	57.0
WP_014884152.1\|2648744_2648963_-	DUF2732 family protein	S4TP68	Salmonella_phage	3.8e-11	62.1
WP_069602163.1\|2649029_2649530_-	replication protein B	M1SV55	Escherichia_phage	7.4e-71	75.3
WP_032658818.1\|2649696_2649972_-	regulatory phage cox family protein	Q1JS60	Enterobacteria_phage	1.5e-41	84.4
WP_069602164.1\|2650107_2650404_+	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	3.3e-34	71.1
WP_069602165.1\|2650467_2651511_+\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	1.4e-148	76.6
2653837:2653855	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2878481 : 2937007

Escherichia_phage(27.27%)

coat,tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069602196.1\|2878481_2879444_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_047626991.1\|2879440_2881825_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_014884347.1\|2881800_2882559_-	molecular chaperone	NA	NA	NA	NA
WP_032636170.1\|2882575_2883124_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_023337442.1\|2883136_2883709_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_014884350.1\|2884138_2885398_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_014884351.1\|2885501_2886005_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_047626983.1\|2886024_2888061_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_014884353.1\|2888065_2888995_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_008500417.1\|2888991_2889879_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_014884354.1\|2890002_2890581_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_078310272.1\|2890583_2890943_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_014884355.1\|2891728_2892157_+	universal stress protein UspC	NA	NA	NA	NA
WP_014884356.1\|2892173_2893598_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_063614365.1\|2893572_2894376_-	trehalose-phosphatase	NA	NA	NA	NA
WP_014884358.1\|2894552_2895533_-	arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_014884359.1\|2895547_2897062_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	1.5e-13	28.0
WP_008500409.1\|2897133_2898123_-	arabinose ABC transporter substrate-binding protein AraF	NA	NA	NA	NA
WP_014884361.1\|2898911_2899415_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_014884362.1\|2899569_2900913_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_014884363.1\|2900955_2901207_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_014884364.1\|2901315_2901399_-	stress response protein AzuC	NA	NA	NA	NA
WP_069602197.1\|2901636_2901975_+	hypothetical protein	NA	NA	NA	NA
WP_014884366.1\|2902172_2902670_+	non-heme ferritin	NA	NA	NA	NA
WP_048997443.1\|2902706_2903048_-	hypothetical protein	NA	NA	NA	NA
WP_048997444.1\|2903279_2904491_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_069602198.1\|2904523_2905192_-	YecA family protein	V5LQX0	Emiliania_huxleyi_virus	1.1e-05	31.2
WP_000019445.1\|2905795_2906776_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_069602199.1\|2907187_2909230_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_047653976.1\|2909222_2910677_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_137984540.1\|2910698_2911867_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	6.2e-177	95.4
WP_069602200.1\|2912181_2912673_-	hypothetical protein	NA	NA	NA	NA
WP_069602201.1\|2915230_2915971_+	hypothetical protein	NA	NA	NA	NA
WP_008500348.1\|2916658_2917207_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_014884376.1\|2917263_2919096_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_023330806.1\|2919092_2919749_-	UvrY/SirA/GacA family response regulator transcription factor	NA	NA	NA	NA
WP_014832453.1\|2920213_2920438_+	DUF2594 family protein	NA	NA	NA	NA
WP_047625769.1\|2920504_2921227_-	transcriptional regulator SdiA	NA	NA	NA	NA
WP_014884379.1\|2921448_2922201_-	L-cystine ABC transporter ATP-binding protein YecC	G3M9Y6	Bacillus_virus	2.9e-26	34.9
WP_014884380.1\|2922197_2922866_-	cystine ABC transporter permease	NA	NA	NA	NA
WP_023330807.1\|2922887_2923874_-	D-cysteine desulfhydrase	NA	NA	NA	NA
WP_014884382.1\|2923981_2924782_-	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014884383.1\|2924868_2925420_-	flagella biosynthesis regulatory protein FliZ	NA	NA	NA	NA
WP_014170714.1\|2925474_2926194_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA
WP_063308697.1\|2926357_2927710_-	FliC/FljB family flagellin	NA	NA	NA	NA
WP_063308698.1\|2927979_2929392_+	flagellar filament capping protein FliD	NA	NA	NA	NA
WP_014884387.1\|2929422_2929833_+	flagellar export chaperone FliS	NA	NA	NA	NA
WP_014884388.1\|2929832_2930204_+	flagella biosynthesis regulatory protein FliT	NA	NA	NA	NA
WP_045135352.1\|2930301_2931789_+	alpha-amylase	NA	NA	NA	NA
WP_045135351.1\|2931882_2932296_-	lipoprotein	NA	NA	NA	NA
WP_069602202.1\|2932525_2932915_-	DNA polymerase V	G8C7R9	Escherichia_phage	8.9e-64	90.7
WP_069602203.1\|2933028_2933391_+	GtrA family protein	U5P0S6	Shigella_phage	5.4e-47	79.2
WP_069602204.1\|2933387_2934320_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	9.4e-160	91.1
WP_071978058.1\|2934329_2935832_+	glucosyltransferase domain-containing protein	Q8LTG0	Salmonella_phage	2.1e-36	26.6
WP_071978059.1\|2935981_2936254_+	hypothetical protein	I6NRL3	Burkholderia_virus	4.5e-06	45.5
WP_080964260.1\|2936644_2937007_-\|tail	tail fiber domain-containing protein	A0A2I6PD03	Escherichia_phage	6.2e-27	57.9

DBSCAN-SWA_9

3026641 : 3034069

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045281012.1\|3026641_3027646_+	NAD-dependent epimerase	A0A2K9L4U8	Tupanvirus	1.0e-34	30.7
WP_045134937.1\|3027697_3028864_-	UDP-glucose 6-dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	3.5e-111	53.0
WP_014884476.1\|3029118_3030525_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.0e-37	28.3
WP_023330866.1\|3030660_3031209_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.1e-54	55.0
WP_069602221.1\|3031219_3032116_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_014884479.1\|3032122_3032989_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	4.1e-109	66.7
WP_014884480.1\|3033004_3034069_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.1e-100	53.8

DBSCAN-SWA_10

3200351 : 3207898

Salmonella_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069602251.1\|3200351_3200672_-	hypothetical protein	K7PGV5	Enterobacterial_phage	2.1e-55	97.2
WP_032647577.1\|3201022_3201385_+	GtrA family protein	B9UDL8	Salmonella_phage	4.3e-44	71.7
WP_069602252.1\|3201381_3202299_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	6.4e-161	91.8
WP_137984544.1\|3202300_3203935_+	hypothetical protein	B9UDL6	Salmonella_phage	5.8e-48	33.4
WP_069602254.1\|3204152_3206204_-	hypothetical protein	B1GS50	Salmonella_phage	1.6e-23	55.8
WP_063928810.1\|3206486_3206732_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	2.7e-10	52.0
WP_069602491.1\|3206880_3207207_+	hypothetical protein	NA	NA	NA	NA
WP_069602255.1\|3207220_3207478_-	hypothetical protein	G8C7W3	Escherichia_phage	3.6e-13	53.3
WP_069602257.1\|3207619_3207898_-	hypothetical protein	K7PGW4	Enterobacterial_phage	6.1e-06	95.7

DBSCAN-SWA_11

3523085 : 3532687

Salmonella_phage(28.57%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032637829.1\|3523085_3523634_-	recombinase family protein	A0A1S6L009	Salmonella_phage	2.6e-77	80.6
WP_017692897.1\|3525044_3525275_-	hypothetical protein	NA	NA	NA	NA
WP_032637826.1\|3526369_3526639_-	hypothetical protein	G8C7W1	Escherichia_phage	1.5e-30	83.1
WP_032635818.1\|3526646_3527276_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	5.1e-101	87.6
WP_045892218.1\|3527275_3527557_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	7.5e-20	46.2
WP_015570936.1\|3527543_3527930_-\|holin	phage holin family protein	A0A192Y8P2	Salmonella_phage	3.2e-45	78.1
WP_015570937.1\|3528107_3529070_-	hypothetical protein	A9YX09	Burkholderia_phage	3.3e-67	44.7
WP_137984547.1\|3530465_3530558_-	YlcG family protein	NA	NA	NA	NA
WP_032635812.1\|3531601_3532687_+	recombinase RecT	K7PKR8	Enterobacteria_phage	7.0e-106	53.5

DBSCAN-SWA_12

3540242 : 3716056

173

Salmonella_phage(50.0%)

portal,terminase,head,transposase,tail,tRNA,integrase,capsid

attL 3625868:3625895|attR 3715766:3715778

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045135187.1\|3540242_3540980_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_014884852.1\|3541112_3542441_+	ATP-dependent RNA helicase SrmB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	7.1e-44	31.8
WP_014884853.1\|3542493_3542877_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	7.3e-34	72.8
WP_014884854.1\|3543191_3543881_+	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	1.3e-54	48.8
WP_014884855.1\|3543921_3545052_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_014884856.1\|3545256_3545676_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	7.7e-13	40.2
WP_045135188.1\|3545745_3546444_+	DTW domain-containing protein	NA	NA	NA	NA
WP_069602302.1\|3546479_3549143_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_023331103.1\|3549253_3550609_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_014884860.1\|3550654_3550978_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_069602303.1\|3550974_3552270_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	30.4
WP_014884862.1\|3557883_3560457_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	5.3e-128	35.2
WP_014884863.1\|3560587_3561319_-	polyphenol oxidase	NA	NA	NA	NA
WP_014884864.1\|3561315_3562296_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_014884865.1\|3562427_3563165_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_014884866.1\|3563432_3563774_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100249759.1\|3563878_3563926_+	pheA operon leader peptide PheL	NA	NA	NA	NA
WP_023331106.1\|3564033_3565194_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_069602304.1\|3565190_3566063_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_023337646.1\|3566123_3567245_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_014884870.1\|3567255_3568326_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	9.0e-90	51.5
WP_014884871.1\|3568540_3568915_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_023337647.1\|3569008_3569605_+	YfiR family protein	NA	NA	NA	NA
WP_014884873.1\|3569597_3570818_+	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	1.9e-06	39.8
WP_069602305.1\|3570830_3571316_+	OmpA family protein	NA	NA	NA	NA
WP_063614188.1\|3571318_3572689_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_045281750.1\|3572727_3573132_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|3573264_3573612_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_014884877.1\|3573655_3574423_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_028014127.1\|3574454_3574994_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003863133.1\|3575009_3575258_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_014884878.1\|3575374_3576736_-	signal recognition particle protein	NA	NA	NA	NA
WP_014884879.1\|3576902_3577694_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_032635780.1\|3577712_3578999_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_014884881.1\|3579050_3579644_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_008502500.1\|3579766_3580645_+	NAD(+) kinase	NA	NA	NA	NA
WP_069602306.1\|3580730_3582392_+	DNA repair protein RecN	NA	NA	NA	NA
WP_014884883.1\|3582530_3582869_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_023331115.1\|3582977_3583265_-	RnfH family protein	NA	NA	NA	NA
WP_023331116.1\|3583254_3583731_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_008502505.1\|3583848_3584331_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
WP_045334934.1\|3584899_3585118_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	5.7e-36	94.4
WP_069602307.1\|3585186_3586287_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	2.7e-182	91.5
WP_069602308.1\|3586283_3586712_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.6e-58	88.0
WP_014884891.1\|3587870_3588269_-\|tail	tail fiber assembly protein	N0DPE7	Edwardsiella_phage	2.4e-11	58.5
WP_014884903.1\|3588494_3588962_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.3e-48	58.7
WP_032678727.1\|3589060_3589714_-	hypothetical protein	E5G6M7	Salmonella_phage	5.2e-56	56.1
WP_069602309.1\|3589717_3590866_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.5e-130	66.7
WP_032665781.1\|3590881_3591709_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.1e-74	67.4
WP_069602310.1\|3591858_3593622_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	2.9e-311	87.4
WP_069602311.1\|3593621_3594674_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.1e-155	79.0
WP_069602312.1\|3594705_3596145_-	TIR domain-containing protein	NA	NA	NA	NA
WP_014884911.1\|3596508_3597096_-	hypothetical protein	S5M7T3	Escherichia_phage	4.5e-19	37.2
WP_080021220.1\|3597137_3597536_-	DUF4065 domain-containing protein	Q0H268	Geobacillus_phage	1.1e-08	36.0
WP_014884913.1\|3598016_3598250_-	DinI family protein	A0A1S6L014	Salmonella_phage	1.2e-31	87.0
WP_014884914.1\|3598260_3598449_-	hypothetical protein	A0A1S6L006	Salmonella_phage	3.7e-23	90.0
WP_069602314.1\|3598608_3599304_-	DNA adenine methylase	A0A0M4S5U3	Salmonella_phage	1.1e-93	74.1
WP_069602315.1\|3599455_3601759_-	replication endonuclease	A0A0M4RTM8	Salmonella_phage	2.9e-271	63.1
WP_071978060.1\|3601751_3602816_-	DNA cytosine methyltransferase	A0A0M3ULA1	Salmonella_phage	2.8e-91	51.3
WP_000019951.1\|3603976_3604249_-	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_001572377.1\|3604370_3605486_+	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_000723070.1\|3605743_3606178_-	hypothetical protein	NA	NA	NA	NA
WP_001572376.1\|3606395_3607742_-	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	2.3e-18	26.6
WP_072196614.1\|3607780_3608749_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.1e-184	98.8
WP_001572373.1\|3608937_3610557_+	phosphoethanolamine--lipid A transferase MCR-9.1	NA	NA	NA	NA
WP_001572372.1\|3610633_3611110_+	WbuC family cupin fold metalloprotein	NA	NA	NA	NA
WP_001572371.1\|3611322_3612672_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_001572368.1\|3612647_3613316_-	response regulator	NA	NA	NA	NA
WP_020978935.1\|3613509_3613800_-	hypothetical protein	NA	NA	NA	NA
WP_000427614.1\|3613903_3614908_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_001572363.1\|3616754_3617459_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.0e-139	99.6
WP_001572362.1\|3617612_3618635_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_069602317.1\|3619680_3620010_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2I6TCA4	Escherichia_phage	4.1e-17	42.2
WP_000780222.1\|3619990_3620272_+	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
WP_023312637.1\|3621173_3621878_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	5.3e-139	99.6
WP_047064190.1\|3621982_3623212_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000427614.1\|3624556_3625561_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
3625868:3625895	attL	NA	NA	NA	NA
WP_004729622.1\|3626000_3626753_-	alpha/beta hydrolase	NA	NA	NA	NA
3625868:3625895	attL	NA	NA	NA	NA
WP_001567390.1\|3626993_3627863_+	DMT family transporter	NA	NA	NA	NA
3625868:3625895	attL	NA	NA	NA	NA
WP_023287190.1\|3627996_3629220_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_004729618.1\|3629405_3630179_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	7.3e-09	26.0
WP_020277918.1\|3630244_3630946_-	DsbA family oxidoreductase	NA	NA	NA	NA
WP_006687059.1\|3631011_3632118_-	alkene reductase	NA	NA	NA	NA
WP_002431133.1\|3632331_3632661_+	thioredoxin family protein	NA	NA	NA	NA
WP_000888080.1\|3632690_3633029_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_020277920.1\|3633033_3633615_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000108589.1\|3633756_3634314_-	OsmC family protein	NA	NA	NA	NA
WP_012695450.1\|3634498_3635083_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	9.7e-22	35.5
WP_057072953.1\|3635242_3635935_+	DUF4158 domain-containing protein	NA	NA	NA	NA
WP_000427614.1\|3636116_3637121_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_024552202.1\|3637199_3637634_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_024552203.1\|3637705_3638056_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_024552204.1\|3638068_3638344_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_024552205.1\|3638371_3638794_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_069602318.1\|3638833_3640519_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.9e-38	28.3
WP_021138753.1\|3640536_3640902_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_021138754.1\|3640898_3641135_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_024552207.1\|3641131_3642121_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_036595897.1\|3642243_3643962_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_028604704.1\|3643964_3644873_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_069602319.1\|3644869_3646087_+	TniQ family protein	NA	NA	NA	NA
WP_000904941.1\|3646147_3646762_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.3e-37	51.9
WP_001087809.1\|3646814_3647051_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_003465059.1\|3647047_3647413_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000136268.1\|3647429_3649076_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-39	28.3
WP_000654684.1\|3649072_3649318_-	mercury resistance system transport protein MerF	NA	NA	NA	NA
WP_000735441.1\|3649320_3649596_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294667.1\|3649611_3649962_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_000429838.1\|3650033_3650468_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_000427623.1\|3650567_3651572_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_074422537.1\|3651753_3651930_-\|integrase	integrase	NA	NA	NA	NA
WP_003100858.1\|3651965_3652292_-	hypothetical protein	NA	NA	NA	NA
WP_003465043.1\|3652546_3652903_-	cupin domain-containing protein	NA	NA	NA	NA
WP_069602320.1\|3653671_3656659_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	6.0e-293	53.3
3654015:3654042	attR	NA	NA	NA	NA
WP_039265225.1\|3656826_3657468_+	recombinase family protein	NA	NA	NA	NA
3654015:3654042	attR	NA	NA	NA	NA
WP_039265224.1\|3657772_3658588_+	SDR family oxidoreductase	NA	NA	NA	NA
3654015:3654042	attR	NA	NA	NA	NA
WP_039265223.1\|3658616_3659378_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.3e-05	25.1
WP_039265222.1\|3659420_3660620_+	MFS transporter	NA	NA	NA	NA
WP_039265221.1\|3660630_3661566_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_039265220.1\|3663069_3663603_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_022542389.1\|3666472_3667477_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_011191356.1\|3668071_3669121_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_011191355.1\|3669117_3670338_+	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_018429611.1\|3670337_3670577_+	DUF2274 domain-containing protein	NA	NA	NA	NA
WP_004357616.1\|3671725_3672259_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004099025.1\|3672285_3673245_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_004099026.1\|3673283_3673670_-	hypothetical protein	NA	NA	NA	NA
WP_004099027.1\|3673940_3674429_+	DUF417 family protein	NA	NA	NA	NA
WP_004357657.1\|3674487_3674670_+	hypothetical protein	NA	NA	NA	NA
WP_026227539.1\|3674905_3675481_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_069602321.1\|3675877_3676903_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_025760400.1\|3676902_3677496_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_004357650.1\|3677498_3678731_-	OsmC family protein	NA	NA	NA	NA
WP_018716209.1\|3678875_3679835_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004099035.1\|3679981_3680425_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_004099036.1\|3680426_3680966_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_004099038.1\|3681098_3681803_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_004357645.1\|3681799_3682768_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
WP_004099040.1\|3682859_3683432_+	hypothetical protein	NA	NA	NA	NA
WP_004099042.1\|3683519_3683969_+	hypothetical protein	NA	NA	NA	NA
WP_004099044.1\|3684075_3684477_+	hypothetical protein	NA	NA	NA	NA
WP_004357638.1\|3684507_3685779_-	MFS transporter	NA	NA	NA	NA
WP_004357637.1\|3685766_3686279_-	DM13 domain-containing protein	NA	NA	NA	NA
WP_011191345.1\|3686282_3686753_-	hypothetical protein	NA	NA	NA	NA
WP_011191344.1\|3686904_3687195_-	DUF1330 domain-containing protein	NA	NA	NA	NA
WP_004357630.1\|3687257_3687689_-	heme-binding protein	NA	NA	NA	NA
WP_011191343.1\|3687762_3688773_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_033982388.1\|3689378_3689984_+	sulfite oxidase-like oxidoreductase	NA	NA	NA	NA
WP_044059343.1\|3689976_3690720_+	ferredoxin reductase	NA	NA	NA	NA
WP_033982398.1\|3690788_3692054_+	thiolase family protein	NA	NA	NA	NA
WP_046092728.1\|3692448_3692730_+	DUF427 domain-containing protein	NA	NA	NA	NA
WP_018429638.1\|3692900_3693167_+	hypothetical protein	NA	NA	NA	NA
WP_110277527.1\|3693378_3696180_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_069602322.1\|3696258_3697263_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_167353006.1\|3697444_3698017_-	signal peptidase II	NA	NA	NA	NA
WP_004364974.1\|3698020_3698917_-	cation transporter	NA	NA	NA	NA
WP_004364961.1\|3699012_3699420_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001189111.1\|3700707_3702216_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
WP_001097217.1\|3704367_3704667_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_033144814.1\|3705029_3705956_-	hypothetical protein	NA	NA	NA	NA
WP_024143025.1\|3705967_3707524_-	TnsD family Tn7-like transposition protein	NA	NA	NA	NA
WP_069602323.1\|3707565_3709014_-	ATP-binding protein	NA	NA	NA	NA
WP_069602324.1\|3709013_3711137_-\|transposase	transposase	NA	NA	NA	NA
WP_024551180.1\|3711123_3711966_-	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA
WP_023307009.1\|3712233_3712461_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	5.4e-29	80.0
WP_014884920.1\|3712460_3712694_-	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	8.1e-20	67.5
WP_014884921.1\|3712763_3712964_-	hypothetical protein	A0A0M5M7U3	Salmonella_phage	3.0e-23	73.8
WP_014884922.1\|3712950_3713178_-	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	1.6e-25	74.7
WP_069602325.1\|3713185_3713695_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.7e-78	87.6
WP_000102104.1\|3713730_3713970_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	8.8e-38	98.7
WP_063849407.1\|3714089_3714722_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.1e-66	60.0
WP_069602326.1\|3714724_3715747_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.2e-189	93.8
WP_137984548.1\|3715750_3716056_+	hypothetical protein	E5G6K9	Salmonella_phage	6.6e-14	41.1

DBSCAN-SWA_13

4102369 : 4232658

110

Escherichia_phage(14.81%)

transposase,tRNA,holin,integrase,protease

attL 4192448:4192507|attR 4239280:4240475

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014885283.1\|4102369_4103383_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.8e-108	58.6
WP_001144069.1\|4103619_4103835_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_014885284.1\|4103950_4105696_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.2e-76	39.0
WP_014885285.1\|4105861_4107706_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_014885286.1\|4107808_4108315_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_069602376.1\|4109731_4110952_+	CHASE domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|4110998_4111703_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001023257.1\|4115540_4115990_-	copper resistance protein	NA	NA	NA	NA
WP_000925242.1\|4116224_4118042_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_032664822.1\|4118041_4118938_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000025662.1\|4118977_4119358_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_000998778.1\|4119362_4120292_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_001188930.1\|4120346_4121027_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_032638101.1\|4121023_4122424_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	2.4e-18	26.6
WP_004388336.1\|4122639_4123074_+	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
WP_032638098.1\|4123297_4123594_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_013087106.1\|4123580_4123841_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_032638097.1\|4124858_4125629_+	conjugal transfer protein TraX	NA	NA	NA	NA
WP_032638096.1\|4125759_4126086_+	hypothetical protein	NA	NA	NA	NA
WP_032638095.1\|4126060_4126867_-	DUF4225 domain-containing protein	NA	NA	NA	NA
WP_069602377.1\|4127746_4128760_-	replication initiation protein	NA	NA	NA	NA
WP_007869691.1\|4129412_4129679_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_013087269.1\|4129666_4130152_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069602379.1\|4132231_4133218_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023328886.1\|4133343_4133649_+	hypothetical protein	NA	NA	NA	NA
WP_069602380.1\|4133688_4134669_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.4e-92	57.7
WP_003847784.1\|4134893_4136045_-	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	9.9e-26	30.3
WP_069602381.1\|4136069_4137035_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_060657179.1\|4137012_4137510_-	heat resistance protein PsiE-GI	NA	NA	NA	NA
WP_069602382.1\|4137512_4139222_-	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	NA	NA
WP_069602383.1\|4139225_4139666_-	heat resistance system thioredoxin Trx-GI	A0A1J0GW78	Streptomyces_phage	9.9e-11	37.7
WP_004118192.1\|4139655_4140801_-	hypothetical protein	NA	NA	NA	NA
WP_069602384.1\|4140880_4141492_-	heat resistance membrane protein HdeD-GI	NA	NA	NA	NA
WP_004118195.1\|4141581_4142469_-	heat resistance protein YfdX2	NA	NA	NA	NA
WP_001022486.1\|4142571_4143486_-	heat resistance protein YfdX1	NA	NA	NA	NA
WP_001275372.1\|4143508_4143967_-	small heat shock protein sHSP20-GI	NA	NA	NA	NA
WP_023205099.1\|4144054_4144195_-\|protease	ATP-dependent metalloprotease FtsH	NA	NA	NA	NA
WP_017146640.1\|4144942_4145134_-	hypothetical protein	NA	NA	NA	NA
WP_069602385.1\|4145133_4147983_-	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	2.6e-128	41.1
WP_069602386.1\|4148088_4148658_-	small heat shock protein sHSP20	NA	NA	NA	NA
WP_000643630.1\|4148692_4148974_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004118208.1\|4149195_4149459_-	hypothetical protein	NA	NA	NA	NA
WP_071978066.1\|4149473_4149737_+\|transposase	transposase	NA	NA	NA	NA
WP_004181997.1\|4150887_4151895_-	formamidase	NA	NA	NA	NA
WP_004181996.1\|4151930_4152620_-	urea ABC transporter ATP-binding subunit UrtE	A0A2H4PQG7	Staphylococcus_phage	5.9e-18	29.9
WP_004181995.1\|4152630_4153380_-	urea ABC transporter ATP-binding protein UrtD	A0A2H4PQG7	Staphylococcus_phage	2.4e-17	26.4
WP_032638062.1\|4153376_4154492_-	urea ABC transporter permease subunit UrtC	NA	NA	NA	NA
WP_004181993.1\|4154501_4155428_-	urea ABC transporter permease subunit UrtB	NA	NA	NA	NA
WP_004197507.1\|4155484_4156675_-	urea ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_069602389.1\|4156979_4160360_+	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	5.8e-34	26.8
WP_004181990.1\|4160322_4161243_+	two-component system response regulator RssB	W8CYM9	Bacillus_phage	2.0e-13	34.1
WP_081330974.1\|4162239_4163208_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.7e-172	91.3
WP_000427614.1\|4163481_4164486_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_069602392.1\|4166446_4168180_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-15	28.7
WP_004118225.1\|4168187_4169135_-	acetamidase/formamidase family protein	NA	NA	NA	NA
WP_004152278.1\|4169179_4170784_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004118227.1\|4170796_4171717_-	ABC transporter permease	NA	NA	NA	NA
WP_004118228.1\|4171716_4172565_-	ABC transporter permease	NA	NA	NA	NA
WP_004118229.1\|4172561_4173155_-	ANTAR domain-containing protein	NA	NA	NA	NA
WP_004118840.1\|4173151_4174279_-	transporter substrate-binding protein	NA	NA	NA	NA
WP_004118231.1\|4174563_4174731_-\|integrase	integrase	NA	NA	NA	NA
WP_161989521.1\|4174659_4174872_+	hypothetical protein	NA	NA	NA	NA
WP_025760133.1\|4176042_4177041_-	endoglucanase	NA	NA	NA	NA
WP_025760132.1\|4177049_4177529_-	cellulose synthase	NA	NA	NA	NA
WP_032672713.1\|4177528_4181569_-	cellulose biosynthesis protein BcsC	NA	NA	NA	NA
WP_069602393.1\|4181582_4183877_-	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA	NA	NA	NA
WP_025760128.1\|4186004_4186808_-	cellulose synthase operon protein YhjQ	NA	NA	NA	NA
WP_047028230.1\|4186798_4187386_-	cellulose biosynthesis protein BcsO	NA	NA	NA	NA
WP_137984550.1\|4187709_4188417_-\|transposase	IS5 family transposase	Q38213	Escherichia_phage	1.8e-110	68.1
WP_069602397.1\|4189769_4190117_-	hypothetical protein	NA	NA	NA	NA
WP_081330975.1\|4190155_4190572_-	hypothetical protein	F1BUJ7	Cronobacter_phage	2.9e-12	46.4
WP_158008545.1\|4190547_4190958_-	hypothetical protein	F1BUJ7	Cronobacter_phage	9.8e-45	81.2
WP_069602398.1\|4191030_4191336_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.5e-45	84.2
WP_014885294.1\|4191881_4192103_-	hypothetical protein	NA	NA	NA	NA
4192448:4192507	attL	NA	NA	NA	NA
WP_000019445.1\|4192594_4193575_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_081330977.1\|4193628_4194027_+	transcriptional regulator	F1BUS8	Erwinia_phage	9.0e-11	30.4
WP_014885296.1\|4194043_4194610_+	PH domain-containing protein	Q4ZA70	Staphylococcus_virus	3.7e-18	32.8
WP_069602399.1\|4195511_4196681_+	DNA repair protein	NA	NA	NA	NA
WP_069602400.1\|4196681_4197446_-	siderophore-interacting protein	NA	NA	NA	NA
WP_014885300.1\|4197593_4198088_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_069602401.1\|4199980_4201501_-	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	1.4e-32	47.8
WP_032635487.1\|4201936_4203316_+	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	5.8e-33	27.6
WP_023331347.1\|4203388_4203991_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069602402.1\|4204033_4204720_+	B3/4 domain-containing protein	NA	NA	NA	NA
WP_069602403.1\|4204732_4205581_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_045268585.1\|4205731_4206703_+	hypothetical protein	NA	NA	NA	NA
WP_023331350.1\|4206744_4207038_-	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA	NA	NA	NA
WP_014885309.1\|4207034_4207922_-	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA
WP_014885310.1\|4207933_4208935_-	autoinducer 2 ABC transporter substrate-binding protein LsrB	NA	NA	NA	NA
WP_045134798.1\|4208936_4209914_-	autoinducer 2 import system permease LsrD	NA	NA	NA	NA
WP_023338805.1\|4209914_4210946_-	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA
WP_069602404.1\|4210942_4212430_-	autoinducer 2 ABC transporter ATP-binding protein LsrA	A0A2H4PQG7	Staphylococcus_phage	3.4e-18	31.0
WP_023338807.1\|4212645_4213614_+	transcriptional regulator LsrR	NA	NA	NA	NA
WP_047625402.1\|4213648_4215229_+	autoinducer-2 kinase	NA	NA	NA	NA
WP_069602405.1\|4215414_4217436_+	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_069601972.1\|4217538_4218696_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_014885317.1\|4218814_4219951_-	23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA	NA	NA	NA
WP_014885318.1\|4220034_4220538_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_014885319.1\|4220608_4221607_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_069602406.1\|4221858_4222824_+	TerC family protein	A0A291LBC5	Escherichia_phage	2.6e-35	32.8
WP_023331360.1\|4223035_4224277_+	serine/threonine transporter SstT	NA	NA	NA	NA
WP_023337835.1\|4224370_4225858_-	altronate dehydratase	NA	NA	NA	NA
WP_014885323.1\|4225875_4227288_-	glucuronate isomerase	NA	NA	NA	NA
WP_023331362.1\|4227762_4229061_+	MFS transporter	NA	NA	NA	NA
WP_014885325.1\|4229242_4230019_+	transcriptional regulator ExuR	NA	NA	NA	NA
WP_014885326.1\|4230362_4231025_+	DedA family protein	NA	NA	NA	NA
WP_014885327.1\|4231027_4231411_+	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA
WP_014885328.1\|4231554_4231923_+	DUF1090 domain-containing protein	NA	NA	NA	NA
WP_008503141.1\|4231952_4232258_+	DUF883 domain-containing protein	NA	NA	NA	NA
WP_014885329.1\|4232259_4232658_+\|holin	phage holin family protein	NA	NA	NA	NA
4239280:4240475	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP017181.1|WP_015571544.1|2052523_2052670_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP017181.1|WP_069602024.1|2091052_2091370_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP017181.1|WP_015571544.1|2052523_2052670_+|hypothetical-protein

2052523_2052670_+

48 aa aa

2040998-2120970

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP017181_1	Orphan	1.17\|1505012\|32\|NZ_CP017181\|CRISPRCasFinder,CRT	1505012-1505043	32	2058470-2058501	1

1. spacer 1.17|1505012|32|NZ_CP017181|CRISPRCasFinder,CRT matches to NZ_CP017181 position: 2058470-2058501, mismatch: 1

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgc	Protospacer
***************.****************

NZ_CP017181.1|WP_069602024.1|2091052_2091370_+|hypothetical-protein

2091052_2091370_+

105 aa aa

2040998-2120970

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP017181_1	Orphan	1.17\|1505012\|32\|NZ_CP017181\|CRISPRCasFinder,CRT	1505012-1505043	32	2058470-2058501	1

1. spacer 1.17|1505012|32|NZ_CP017181|CRISPRCasFinder,CRT matches to NZ_CP017181 position: 2058470-2058501, mismatch: 1

acaatctgaactccttaccttgtcacagatgc	CRISPR spacer
acaatctgaactcctcaccttgtcacagatgc	Protospacer
***************.****************

2. NZ_CP017182

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 7188

Macacine_betaherpesvirus(75.0%)

integrase

attL 3008:3020|attR 8081:8093

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013087134.1\|1826_2792_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	9.8e-136	76.9
WP_023327689.1\|2791_3958_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	5.5e-218	94.3
3008:3020	attL	NA	NA	NA	NA
WP_015572055.1\|4698_5709_+	replication initiation protein	J9Q7H0	Salmonella_phage	6.3e-85	55.2
WP_015572054.1\|6411_7188_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	7.0e-52	91.2
8081:8093	attR	NA	NA	NA	NA

DBSCAN-SWA_2

16738 : 20063

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000694953.1\|16738_17089_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.9e-20	54.3
WP_000790483.1\|17232_17664_-	silver-binding protein SilE	NA	NA	NA	NA
WP_032638115.1\|17914_19390_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	2.1e-28	30.5
WP_001572351.1\|19382_20063_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	35.6

DBSCAN-SWA_3

23436 : 30549

Leptospira_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000574021.1\|23436_26583_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	8.0e-62	22.6
WP_008322815.1\|26669_27110_+	hypothetical protein	NA	NA	NA	NA
WP_069602501.1\|27236_29684_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	34.9
WP_000843494.1\|29724_29922_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_137984562.1\|29955_30549_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.0e-10	31.9

DBSCAN-SWA_4

38464 : 47040

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_137984563.1\|38464_38743_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	1.2e-43	97.7
WP_000612626.1\|38864_39212_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_032638099.1\|39260_40799_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.3e-278	93.6
WP_069602503.1\|40901_42467_+	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.9e-12	28.2
WP_013087140.1\|44243_44447_-	hypothetical protein	NA	NA	NA	NA
WP_049022775.1\|44741_45404_-	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_081330987.1\|45406_46378_-	StbA family protein	A0A222YXF2	Escherichia_phage	4.1e-73	47.1
WP_013087136.1\|46608_47040_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.0e-28	53.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017181

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

2. NZ_CP017182

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection