CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017184	Enterobacter roggenkampii strain DSM 16690 chromosome, complete genome	4 crisprs	DEDDh,csa3,WYL,DinG,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,cas3	0	28	5	0
NZ_CP017185	Enterobacter roggenkampii strain DSM 16690 plasmid pDSMZ16690, complete sequence	0 crisprs	DEDDh	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017184_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017184_1

1503019-1504308

Unclear

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRT
GTTCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR

21 spacers

The CRISPR arrays of NZ_CP017184_1

>merge|NZ_CP017184|1|1503019-1504308|CRISPRCasFinder,CRT,PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAATGTGCCCACTGACACCATCACTCACAGCGGTGGTTCACTGCCGTACAGGCAGCTTAGAAATTGACGGTCTGGCCCAGGGCATCCGTCAGGGTGTTCACTGCCGTACAGGCAGCTTAGAAATGGTGAGCTGCGGCGAACTGTTGGAGCTGGTTGTTCACTGCCGTACAGGCAGCTTAGAAAAGCAACAACAGCTAGACATCAAAATCACACCTGTTCACTGCCGTACAGGCAGCTTAGAAACGCACGGTCACGCAGCCAGCGGATATCCCATAGTTCACTGCCGTACAGGCAGCTTAGAAACTTATCACGCGCCGCCCCCAACCCTTCTAACGGTTCACTGCCGTACAGGCAGCTTAGAAACTCGGCAGATATTACTCTGCCCGACAAGGAAATGTTCACTGCCGTACAGGCAGCTTAGAAACGCCGACGTCGCCGTCGTTCTGACGATGATGGAGTTCACTGCCGTACAGGCAGCTTAGAAAATATTCATCACCAGCTAAGCATGGGTAATAATGTTCACTGCCGTACAGGCAGCTTAGAAAACCCTGGCATCGGGCCAGAAAATGACAAAAGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCGCAAAGGAGTGCAGTCATGAGCAAATCACGTTCACTGCCGTACAGGCAGCTTAGAAAAAAACCAGCGGCGTAACACCTGCAACCGTAAAGTTCACTGCCGTACAGGCAGCTTAGAAACAGTTTGCGAGGGGAAACGCCTTTGACCTCTGGTTCACTGCCGTACAGGCAGCTTAGAAAATTTGACTTGCTGGATGTTAGTTACGCTGCACGTTCACTGCCGTACAGGCAGCTTAGAAATCCTGCTCCTTCACCTGCTGGGCAGTGATGTTGTTCACTGCCGTACAGGCAGCTTAGAAATGCCGGGGTCTTTCCGTTTTACCTTTCAGCGCGTTCACTGCCGTACAGGCAGCTTAGAAATAAGCCCGTCCCGTGTCCGTTTATGCTCCAGTGTTCACTGCCGTACAGGCAGCTTAGAAAGATATCCATATCAATAGGCAGGGCTGACAACCGTTCACTGCCGTACAGGCAGCTTAGAAAGGTTGCCCAGCAGCAGCGAAGGGATATCAACGGTTCACTGCCGTACAGGCAGCTTAGAAATGAGAGCGAGAAAAGCAAGATTGAGAGCTACGGTTCACTGCCGTACAGGCAGCTTAGAAAGCACTTCAGCCGGTTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACAGGCAGTAGGCACA

>NZ_CP017184|1|1|1503019-1504308|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTGCCCACTGACACCATCACTCACAGCGGTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTGACGGTCTGGCCCAGGGCATCCGTCAGGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGGTGAGCTGCGGCGAACTGTTGGAGCTGGTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGCAACAACAGCTAGACATCAAAATCACACCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGCACGGTCACGCAGCCAGCGGATATCCCATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTTATCACGCGCCGCCCCCAACCCTTCTAACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTCGGCAGATATTACTCTGCCCGACAAGGAAAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGCCGACGTCGCCGTCGTTCTGACGATGATGGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATATTCATCACCAGCTAAGCATGGGTAATAAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCCTGGCATCGGGCCAGAAAATGACAAAAGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTCGCAAAGGAGTGCAGTCATGAGCAAATCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAAACCAGCGGCGTAACACCTGCAACCGTAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	CAGTTTGCGAGGGGAAACGCCTTTGACCTCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATTTGACTTGCTGGATGTTAGTTACGCTGCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCCTGCTCCTTCACCTGCTGGGCAGTGATGTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCCGGGGTCTTTCCGTTTTACCTTTCAGCGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TAAGCCCGTCCCGTGTCCGTTTATGCTCCAGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATATCCATATCAATAGGCAGGGCTGACAACC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGTTGCCCAGCAGCAGCGAAGGGATATCAACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGAGAGCGAGAAAAGCAAGATTGAGAGCTACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCACTTCAGCCGGTTAAGCGTCGGTGGTTAGG
GTCCAATGCCGAACAGGCAGTAGGCACA

>NZ_CP017184|1|1|1503019-1504308|CRT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGTGCCCACTGACACCATCACTCACAGCGGTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTGACGGTCTGGCCCAGGGCATCCGTCAGGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGGTGAGCTGCGGCGAACTGTTGGAGCTGGTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGCAACAACAGCTAGACATCAAAATCACACCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGCACGGTCACGCAGCCAGCGGATATCCCATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTTATCACGCGCCGCCCCCAACCCTTCTAACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTCGGCAGATATTACTCTGCCCGACAAGGAAAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGCCGACGTCGCCGTCGTTCTGACGATGATGGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATATTCATCACCAGCTAAGCATGGGTAATAAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCCTGGCATCGGGCCAGAAAATGACAAAAGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTCGCAAAGGAGTGCAGTCATGAGCAAATCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAAACCAGCGGCGTAACACCTGCAACCGTAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	CAGTTTGCGAGGGGAAACGCCTTTGACCTCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATTTGACTTGCTGGATGTTAGTTACGCTGCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCCTGCTCCTTCACCTGCTGGGCAGTGATGTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCCGGGGTCTTTCCGTTTTACCTTTCAGCGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TAAGCCCGTCCCGTGTCCGTTTATGCTCCAGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATATCCATATCAATAGGCAGGGCTGACAACC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGTTGCCCAGCAGCAGCGAAGGGATATCAACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGAGAGCGAGAAAAGCAAGATTGAGAGCTACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCACTTCAGCCGGTTAAGCGTCGGTGGTTAGG
GTCCAATGCCGAACAGGCAGTAGGCACA

>NZ_CP017184|1|1|1503079-1504248|PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTGACGGTCTGGCCCAGGGCATCCGTCAGGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGGTGAGCTGCGGCGAACTGTTGGAGCTGGTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGCAACAACAGCTAGACATCAAAATCACACCT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGCACGGTCACGCAGCCAGCGGATATCCCATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTTATCACGCGCCGCCCCCAACCCTTCTAACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTCGGCAGATATTACTCTGCCCGACAAGGAAAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGCCGACGTCGCCGTCGTTCTGACGATGATGGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATATTCATCACCAGCTAAGCATGGGTAATAAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCCTGGCATCGGGCCAGAAAATGACAAAAGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTCGCAAAGGAGTGCAGTCATGAGCAAATCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAAACCAGCGGCGTAACACCTGCAACCGTAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	CAGTTTGCGAGGGGAAACGCCTTTGACCTCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATTTGACTTGCTGGATGTTAGTTACGCTGCAC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCCTGCTCCTTCACCTGCTGGGCAGTGATGTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCCGGGGTCTTTCCGTTTTACCTTTCAGCGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TAAGCCCGTCCCGTGTCCGTTTATGCTCCAGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATATCCATATCAATAGGCAGGGCTGACAACC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGTTGCCCAGCAGCAGCGAAGGGATATCAACG
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGAGAGCGAGAAAAGCAAGATTGAGAGCTACG
GTTCACTGCCGTACAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017184.1\|WP_045405999.1\|1507170_1508070_-\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP017184.1\|WP_008499998.1\|1508240_1508936_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP017184.1\|WP_069598055.1\|1504394_1505363_-\|NADH-oxidoreductase	unknown	unknown	gnl\|CDD\|236735
NZ_CP017184.1\|WP_069598056.1\|1509226_1510885_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP017184.1\|WP_021240906.1\|1489993_1490479_+\|type-II-secretion-system-protein-M	unknown	unknown	gnl\|CDD\|377391
NZ_CP017184.1\|WP_008500007.1\|1494984_1496796_+\|chitinase	unknown	unknown	gnl\|CDD\|381595
NZ_CP017184.1\|WP_069598052.1\|1498062_1499499_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187556
NZ_CP017184.1\|WP_069598051.1\|1490475_1491273_+\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|224900
NZ_CP017184.1\|WP_006174393.1\|1515609_1515930_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP017184.1\|WP_069598054.1\|1502418_1502853_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|311556
NZ_CP017184.1\|WP_008500009.1\|1491530_1494263_+\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|119365
NZ_CP017184.1\|WP_069598058.1\|1513109_1515050_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP017184.1\|WP_069598057.1\|1510881_1511838_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|377343
NZ_CP017184.1\|WP_008500006.1\|1496956_1497970_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP017184.1\|WP_023618360.1\|1511997_1513113_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP017184.1\|WP_023343670.1\|1500549_1502268_-\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP017184.1\|WP_069598053.1\|1499509_1500511_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|236710
NZ_CP017184.1\|WP_008499993.1\|1515120_1515342_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP017184.1\|WP_045334111.1\|1505373_1507026_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP017184.1\|WP_008500008.1\|1494399_1494834_+\|type-III-secretion-system-invasion-protein-IagB	unknown	unknown	gnl\|CDD\|185228

Protein	Function_ID	Function_description	E-value
NZ_CP017184.1\|WP_045405999.1\|1507170_1508070_-\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	2.89577e-114
NZ_CP017184.1\|WP_008499998.1\|1508240_1508936_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	2.26411e-146
NZ_CP017184.1\|WP_069598055.1\|1504394_1505363_-\|NADH-oxidoreductase	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
NZ_CP017184.1\|WP_069598056.1\|1509226_1510885_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP017184.1\|WP_021240906.1\|1489993_1490479_+\|type-II-secretion-system-protein-M	gnl\|CDD\|377391	pfam04612, T2SSM, Type II secretion system (T2SS), protein M. This family of membrane proteins consists of Type II secretion system protein M sequences from several Gram-negative (diderm) bacteria. The precise function of these proteins is unknown, though in Vibrio cholerae, the T2SM (EpsM) protein interacts with the T2SL (EpsL) protein, and also forms homodimers.	5.93545e-29
NZ_CP017184.1\|WP_008500007.1\|1494984_1496796_+\|chitinase	gnl\|CDD\|381595	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.	8.50635e-71
NZ_CP017184.1\|WP_069598052.1\|1498062_1499499_-\|SDR-family-oxidoreductase	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.31193e-140
NZ_CP017184.1\|WP_069598051.1\|1490475_1491273_+\|prepilin-peptidase	gnl\|CDD\|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	1.46393e-43
NZ_CP017184.1\|WP_006174393.1\|1515609_1515930_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	9.90991e-48
NZ_CP017184.1\|WP_069598054.1\|1502418_1502853_+\|DoxX-family-protein	gnl\|CDD\|311556	pfam07681, DoxX, DoxX. These proteins appear to have some sequence similarity with pfam04173 but their function is unknown.	8.08444e-12
NZ_CP017184.1\|WP_008500009.1\|1491530_1494263_+\|glycoside-hydrolase	gnl\|CDD\|119365	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.	6.9888e-126
NZ_CP017184.1\|WP_069598058.1\|1513109_1515050_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP017184.1\|WP_069598057.1\|1510881_1511838_-\|DUF535-domain-containing-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	7.25284e-123
NZ_CP017184.1\|WP_008500006.1\|1496956_1497970_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	6.20693e-53
NZ_CP017184.1\|WP_023618360.1\|1511997_1513113_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP017184.1\|WP_023343670.1\|1500549_1502268_-\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP017184.1\|WP_069598053.1\|1499509_1500511_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|236710	PRK10534, PRK10534, L-threonine aldolase; Provisional.	0
NZ_CP017184.1\|WP_008499993.1\|1515120_1515342_-\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	6.50125e-48
NZ_CP017184.1\|WP_045334111.1\|1505373_1507026_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP017184.1\|WP_008500008.1\|1494399_1494834_+\|type-III-secretion-system-invasion-protein-IagB	gnl\|CDD\|185228	PRK15328, PRK15328, type III secretion system invasion protein IagB.	2.16696e-85

>NZ_CP017184.1|WP_069598054.1|1502418_1502853_+|DoxX-family-protein
MVKSLLIAVNEKLSCDDLGKLLLRLAVGGLMLFHGLHKLFGGVGFISGMLVEKGLPGFIAYGVLIGEVVAPILIIVGLFTRPAALVLALTMIVAWLMVGLDETFALDKVGAWAIESLVYFFIGSLAVAFLGAGRFALGKTPAWR
>NZ_CP017184.1|WP_023343670.1|1500549_1502268_-|ubiquinone-dependent-pyruvate-dehydrogenase
MKQTVAAYIAKTLEQAGVKRIWGVTGDSLNGLSDSLNKMKTIEWMPTRHEEVAAFAAGAEAQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVIPGDVALKAAPEGASTHWYHAPQPVVTPAEEELKKLAQLLRYASNIALMCGSGCAGAHKELLEFAGKLKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQFPYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLAALLPLLEEKTDRKFLDKALSDYRDARKGLDDLAKPSDKAIHPQYLAQQISHFADDDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAKATAPERQVVAMCGDGGFSMLMGDFLSVVQMKLPLKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELAKTNWLR
>NZ_CP017184.1|WP_069598053.1|1499509_1500511_-|low-specificity-L-threonine-aldolase
MIDLRSDTVTRPSRAMLEEMMAAPVGDDVYGDDPTVNELQRYAAALSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAPDGSLPLDKVAAKIKADDIHFARTRLLSLENTHNGKVLPREYLKTAWEFTRERGLGLHVDGARIFNAVVAYGCALKEITQYCDSFTICLSKGLGTPVGSLLVGNADYIKRANRWRKMTGGGMRQAGILAAAGLYALKNNVARLKDDHDNAAWMAAQLREIGADVMRHDTNMLFVRVGDDHAAALGEFMKARGVLINASPVVRLVMHLDVNREQLADVVKHWQAFLQR
>NZ_CP017184.1|WP_069598052.1|1498062_1499499_-|SDR-family-oxidoreductase
MPQRILVLGASGYIGQHLTAALSQQGHQVLAAARNTERLQKLGLPGITCHNVDLNWPKALPALLEGVDTLYYLVHSMGEGGDFIAHERQVAMNVRDALLQSPVKQVIFLSSLQAPEREQSDHLRARQLTADILRGANIPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPAEKHRVLEAAGPEVLSYQAQFEHFMRVSGRRRWLIPIPFPTRWISVWFLNVITSVPPTTAKALIQGLKHDLLADDRALRALIPQDLIRFDDAVRNTLKEEEQLVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVKTSASLAALWEVVNQIGGKERYFFGNLLWQTRGAMDLLVGHRLAKGRPARPYLEVGDAVDSWKVIIVEPEKQLALLFGMKAPGLGRLCFTLKDKGDHRELDVRAWWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIAQRAEQKTEKI
>NZ_CP017184.1|WP_008500006.1|1496956_1497970_-|NAD(P)-dependent-oxidoreductase
MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLQKMGAEFVHADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQEAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDVQEDFRPARFACEFARSKAASEEVIDLLAQSNPHTRFTVLRPQSLFGPHDKVFIPRLAQMMHHYGSVLLPRGGDALVDMTYYENAVHAMWLASQPDCDKLISGRAYNITNGEPCTLRSIVQRLIDELQINCRIRSVPYPMLDMIARSMERFGSKTAKEPALTHYGVSKLNFDFTLDISRAENELGYKPVVTLDEGIMRTAAWLRDHGKLHR
>NZ_CP017184.1|WP_008500007.1|1494984_1496796_+|chitinase
MTKRTLLSVLVAGACIAPFMAQAASLQAASSEPYTMKASDLAKKEKELTNFPLMVSVKDTIATLDNSLVEQIEPGRASNPDNVKRVEGIVKASDWEYLFPLRAQSYTYSNFLKAVGKFPALCKTYNDGRDSDAICRKELATMFAHFAQETGGHESWRPEAEWRQALVHVREMGWTEGQKGGYNGECNPDIWQGQTWPCGKDKDGDFVSYFGRGAKQLSYNYNYGPFSEAMFGTVRTLLDKPELVADTWLNLASAIFFFAYPQPPKPSMLQVIDGTWQPNDHDKANGLVPGFGVTTQIINGGVECGGPTEIAQSENRIKYYKEFANYLKVPVPANEVLGCANMKQFDEGGAGALKIYWEQDWGWSPDTPDGKTYSCQLVGYQTPFSAFKEGDYTNCVKKFYNVNIINDDGSAVTPGEDKTPADTTPPADTTPAEDTTPVEPATVNHAPVAQIAGPIGAVEAGAQVSLSAEGSTDADGNKLTYTWRSQDGQTVTGQDKAVVTFKAPESATAQQYEIGLTVSDGELTSTTSYLLNVKAKAESKDEGTSGSYAAWSANSKYNAGDIVNNHGKLFQCKPFPYSGWCNNAPAYYEPGAGLAWADAWTAL
>NZ_CP017184.1|WP_008500008.1|1494399_1494834_+|type-III-secretion-system-invasion-protein-IagB
MKRVIIFLLLFSQSVFANCWDNAGHYYHVDPWLLYAIAKVESGMNPHAVGWNHDGTRDVGLMQINSSHFSELERQGIDENQLINEPCTSIMVGASILSGMINVYGYNWEAVGAYNAGLKKENYPQRMRYAHKVWAKYQQIKSGK
>NZ_CP017184.1|WP_008500009.1|1491530_1494263_+|glycoside-hydrolase
MKFIKPKYLALFIAAATGSAFAAAPGAPTIGSGNDKFALVEVDQAAQDYNSLVKVHNDGVDVKVEWNVWSGDAPTSAKVLLDGKTVWTGAAGASGSATFKVKKGGRYQEQVEVCNASGCTKSASKLIIVADTDGSHLLPLNAPLQENNKTFAKHTDKVVAAYFPEWGVYDRNFPVDKIPAANLNHILYGFIPICGGDGINDGLKTVEGGNSFSVLQRDCAGRPDYTVAIHDPWAALQKPQSGVSNWDDPYKGNFGQLMALKKAHPDLKVLPSIGGWTLSDPFFHMGDPAIRARFVSSVKDFLQTWKFFDGVDIDWEFPGGGGVSEHLGNPQQDKATYTALMHDLRTMLNELSAQTGRTYELTSAIGAGRDKIEDVDYTAAQQYLDHIFLMSYDFYGGWSNTELGHQAALRAPSWRPDTNYTTENGVDALLAQGVQPGKIVVGAGMYGRGWTGVHGYTGDNPFTGTATGMVKGTWEPGVVDYRQIVNEYKGKPGWEYGYDANAEAPYVFNKSTGDLITYEDARSTAAKGKYVLSKNLGGLFAWSIDSDTGDILNAMNESLLGGSTPVDPVVTNHAPIASSADQNVSGPATVTLDGSASSDPDGDAITYKWTQVSGPSVTLSNSTKAKATFNVAAATSDQTMVFRLTVTDAKGLSNAIDVQVVNKAPKANQAPVVNAMEAVTLQAGETYALHAQAVDPDGDAMTFSWSVPADMHATGTDTANVTITAPDVATTSTYTLSVVVGDGKTSVQSNVQVTVNPKPADVTPPSDEVTPPSDDVTPPSDEVTPPSDDVTPPSDEGSATGSCDAPVDANASKYAAWDASKIYNSGDTVSFDHLVWKAKYWTQGNQPGFGVDAWELVSNVKMNWRSDLVYNGGETTTYQGNVYRAKWWTRGDNPANSDVWVKEGPSTDCK
>NZ_CP017184.1|WP_069598051.1|1490475_1491273_+|prepilin-peptidase
MNGLILVRESYPVGFAAMSGVFGAILGSFLGVVVDRVPGMVLEEESRSNLLFPASHCPVCQHALRAWENIPLLSWLALRGRCRCCKSPIPLRLFLLELLTAVFFALTARWIPDLASLFSLWVLAAFLLPLAMIDGQHQLLPDCLTQPLLWAGLLFHAFSHGLLLRDALLGAVAGYLSLWLVYWAFRLLTRREGLGYGDFKLLAALGAWCGWQSLPAIELIAALSGIVGYLLLNKSNKNNQTIAFGPYLAFAGIALYTCQLFVNTY
>NZ_CP017184.1|WP_021240906.1|1489993_1490479_+|type-II-secretion-system-protein-M
MKARIAQFTSRYQQYSTREKFILKIAAGALCSAVIYYAGIIPLDNMIKNSQATLARQIETVNWMKTEIDKNHLPVLQVKTDNPRSVVENSAHEINLTLTDIRQDGQTLAFVVNRVNVYELKNWLREMNLASGVRLEKMNLTPVDHLSDVKAEIQLTWKKVA
>NZ_CP017184.1|WP_069598055.1|1504394_1505363_-|NADH-oxidoreductase
MTMPTSQCPWRMQVHHIHQETPDVWTLSLLCHDYYPYRAGQYALVSVRHSADTLRAYTLSSTPGVSEYITLTVRRIDDGAGSQWLTRDVKRGDYIWLSDAQGDFICDDKADDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVQAIFSVRSPDDVIFAEEWRDYPVTLVAEHNATHGFVPGRLSRELLQSVPDIANRTVMTCGPAPYMAIVEEDVKALGVTRFFKEQFFTPVAEAATSGIQFTKLQPAQTFFGRVGTSLLEALESNNVPVAAACRAGVCGCCKTKVVSGEYTVTSTMTLSDAEIAEGYVLACSCHPQGDLVLA
>NZ_CP017184.1|WP_045334111.1|1505373_1507026_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAFKAREYGIIDHYVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLKADANARVENPMSELQLVSDDLGDLQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFRVMSILDAGETGTYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLKQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRETLLGAADSLIDLVSREKLRHIFLVGGCDGARGERNYFTDFATRVPEDCLILTLACGKYRFNKLDFGNIEGLPRLIDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVTNIVTGPTAPGFLTPDLLAVLNEKFGLRSVTNVEDDMKQLLSA
>NZ_CP017184.1|WP_045405999.1|1507170_1508070_-|lysine-exporter-LysO-family-protein
MFSGLLIILLPLIVGYLIPLHRESALRLINRFLSWIVYVILFFMGISLAFLDNLATNLLSILHYSVVTVVVILLCNIAALFWLERTVPWKNHHHQEKLPSRIAMALESLKLCGVVVIGFLLGLTGWAFLQHATEASEYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMMVAVIVVASSMVAGVINAFILDLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELLAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRSGGLEMVPAAIVHGFILSLLVPVLMAVFSA
>NZ_CP017184.1|WP_008499998.1|1508240_1508936_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKEVIGYIVAQVVGGIIAAGVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKHAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLFWVMPIIGGILGGVLYRTLLEKRD
>NZ_CP017184.1|WP_069598056.1|1509226_1510885_+|ATP-dependent-endonuclease
MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEDDLYHFVRDDFWFPPGDVTGREKHLHIILTFRESEPGRHRVRRFRPLSPCWVPCDDGFHRIFYRLEGEMAENEGVLTLRDFLDEKASPIPLDNIDDLARHLIRLTPVLRLRDARFMRRIRNGTVPNMPEVEVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTSESRHRLMRRRSHDEQRSWRYLDIINRMIDRPGGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLHPIMLSVAWHLLNLLPLQRVTTTNSGELLSLTPVEHVCRLVRESSRVSAYRLGPGGLNAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYASTVRSLLNNEREEERDHLTMLPAMDMEHFMYRQGFDDVFHRIAMVPVDVPMNMRRVIAKAIRRSSKPDLAIEVATEAGRRGVEAVPTLLRKMFSRVLWLARGRAD
>NZ_CP017184.1|WP_069598057.1|1510881_1511838_-|DUF535-domain-containing-protein
MSSIVDTPFSNLPQPASGWQLFSHLASGKLTPGLAWQNPAYRRKFMLRSLATPVSTARLLTSLAKQPSLMQMLQVQPGLPCRLHRPWLTVNMDRQQALESLNWHYQTMSRHMPASLLSGYLSKKGFTLLTLTGKDEEQFTVRLCADAFLDKEGEATLAFCDHQNTVLAEMTFTLCQFEGKSTLFIGGLQGAKAHVPHELIQGATKACHGLFPKRLLVEAAMTLGTAFQVEQIVAVSNDTHIYRSWRYRKKKEGKLLADYDSFWISIGGEKQDSGNFMLPLVMPRKPMEEIASKKRSEYRRRYALLDSLIQQVNQATQR
>NZ_CP017184.1|WP_023618360.1|1511997_1513113_+|macrolide-transporter-subunit-MacA
MNLKGKRRTLFLLLAVVVLAGGYWLWQVLNAPVPQYQTLIVRPGELQQNVLATGKLDALRKVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAENQIREVEATLMELRAQRAQAQAERNLAQVTLTRQQALAKTQAISKQDLDTATTELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTKIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQNAWFTVLGDPQTRYEGVLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQLTGVKNVLTIPLSALGESAGDSRYKVKVLRNGETREREVVIGARNDTDVVVVKGLEEGEEVVISESLPGAAK
>NZ_CP017184.1|WP_069598058.1|1513109_1515050_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELKDIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLNAAQNVEVPAVYAGVERKKRLERAQMLLTRLGLAERVEYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIHDGELVSNPPPRDSRAAAPKEVLPASTGWGQFSSGFREALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRVGNVDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKANVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSAMAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLFLPGWEIGFSPVAIITAFLCSTFTGILFGWLPARNAARLDPVDALARE
>NZ_CP017184.1|WP_008499993.1|1515120_1515342_-|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASLIVPIEAETVA
>NZ_CP017184.1|WP_006174393.1|1515609_1515930_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA

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Crispr_ID: NZ_CP017184_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017184_2

1520404-1521512

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CRT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	PILER-CR

18 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_CP017184_2

>merge|NZ_CP017184|2|1520404-1521512|CRISPRCasFinder,CRT,PILER-CR
GTTCACTGCCGTGCAGGCAGCTTAGAAAAAAAAATTCAAGAAAGGGAAGGGAAAGACACCGTTCACTGCCGTGCAGGCAGCTTAGAAAAGGGGGAATTGAGTAAGATCGCAAACTCTCAAGTTCACTGCCGTGCAGGCAGCTTAGAAAGTATAGTGAGACATAAGCTCTTTCGCTCCGATGTTCACTGCCGTGCAGGCAGCTTAGAAAAGTGGCAAGCTGGCCGCAGCCATCTCTAAAGCGTTCACTGCCGTGCAGGCAGCTTAGAAATTATCATAAGCGGGCTATAGACCGCTGGTATGGTTCACTGCCGTGCAGGCAGCTTAGAAACCGGAACTGGCAAAACAATGTTCAGCACCACGGGTTCACTGCCGTGCAGGCAGCTTAGAAACCCGTCGCGCTCATGAATCGCTCCGCTGCGGTGTTCACTGCCGTGCAGGCAGCTTAGAAAATTGACTGACGCCACACGCACACCTCCCCCCAGTTCACTGCCGTGCAGGCAGCTTAGAAACGCTATATTCATGATGGTTCGTACACAAACAAGTTCACTGCCGTGCAGGCAGCTTAGAAATCGGATGTTCTCGCGCCAGACTCGCTATGATTGTTCACTGCCGTGCAGGCAGCTTAGAAAAGACCAGCGTGGCCACATTGCACCTGCTTCATGTTCACTGCCGTGCAGGCAGCTTAGAAATTATCGCAAGTCTTGTCGTCGTGGCGGTGATGGTTCACTGCCGTGCAGGCAGCTTAGAAATCGCGGGGCTATGACTTGTCAGCCCATCGCCCGTTCACTGCCGTGCAGGCAGCTTAGAAAGAAGACATGAAGCGCTCAATGAGAGCCAGGATGTTCACTGCCGTGCAGGCAGCTTAGAAATGACTGGGATAAGCACGCCACGCCTGGCGCGAGTTCACTGCCGTGCAGGCAGCTTAGAAAGGAGATGAGTAAAGTGGTGCCAGCCTGGCATCGTTCACTGCCGTGCAGGCAGCTTAGAAATACGGCGGGAATTGACACCACGACCACGGGGAGTTCACTGCCGTGCAGGCAGCTTAGAAAAACGACGGGCGCGGTCTTGATACGACGCTGCTGTTCACTGCCGTGCAGGCAGCTTGGAAA

>NZ_CP017184|2|2|1520404-1521512|CRISPRCasFinder
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AAAAAATTCAAGAAAGGGAAGGGAAAGACACC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AGGGGGAATTGAGTAAGATCGCAAACTCTCAA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	GTATAGTGAGACATAAGCTCTTTCGCTCCGAT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AGTGGCAAGCTGGCCGCAGCCATCTCTAAAGC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TTATCATAAGCGGGCTATAGACCGCTGGTATG
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CCGGAACTGGCAAAACAATGTTCAGCACCACGG
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CCCGTCGCGCTCATGAATCGCTCCGCTGCGGT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	ATTGACTGACGCCACACGCACACCTCCCCCCA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CGCTATATTCATGATGGTTCGTACACAAACAA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TCGGATGTTCTCGCGCCAGACTCGCTATGATT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AGACCAGCGTGGCCACATTGCACCTGCTTCAT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TTATCGCAAGTCTTGTCGTCGTGGCGGTGATG
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TCGCGGGGCTATGACTTGTCAGCCCATCGCCC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	GAAGACATGAAGCGCTCAATGAGAGCCAGGAT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TGACTGGGATAAGCACGCCACGCCTGGCGCGA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	GGAGATGAGTAAAGTGGTGCCAGCCTGGCATC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TACGGCGGGAATTGACACCACGACCACGGGGA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AACGACGGGCGCGGTCTTGATACGACGCTGCT
GTTCACTGCCGTGCAGGCAGCTTGGAAA

>NZ_CP017184|2|2|1520404-1521512|CRT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AAAAAATTCAAGAAAGGGAAGGGAAAGACACC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AGGGGGAATTGAGTAAGATCGCAAACTCTCAA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	GTATAGTGAGACATAAGCTCTTTCGCTCCGAT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AGTGGCAAGCTGGCCGCAGCCATCTCTAAAGC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TTATCATAAGCGGGCTATAGACCGCTGGTATG
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CCGGAACTGGCAAAACAATGTTCAGCACCACGG
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CCCGTCGCGCTCATGAATCGCTCCGCTGCGGT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	ATTGACTGACGCCACACGCACACCTCCCCCCA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CGCTATATTCATGATGGTTCGTACACAAACAA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TCGGATGTTCTCGCGCCAGACTCGCTATGATT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AGACCAGCGTGGCCACATTGCACCTGCTTCAT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TTATCGCAAGTCTTGTCGTCGTGGCGGTGATG
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TCGCGGGGCTATGACTTGTCAGCCCATCGCCC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	GAAGACATGAAGCGCTCAATGAGAGCCAGGAT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TGACTGGGATAAGCACGCCACGCCTGGCGCGA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	GGAGATGAGTAAAGTGGTGCCAGCCTGGCATC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TACGGCGGGAATTGACACCACGACCACGGGGA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AACGACGGGCGCGGTCTTGATACGACGCTGCT
GTTCACTGCCGTGCAGGCAGCTTGGAAA

>NZ_CP017184|2|2|1520825-1521512|PILER-CR
GTTCACTGCCGTGCAGGCAGCTTAGAAA	ATTGACTGACGCCACACGCACACCTCCCCCCA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	CGCTATATTCATGATGGTTCGTACACAAACAA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TCGGATGTTCTCGCGCCAGACTCGCTATGATT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AGACCAGCGTGGCCACATTGCACCTGCTTCAT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TTATCGCAAGTCTTGTCGTCGTGGCGGTGATG
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TCGCGGGGCTATGACTTGTCAGCCCATCGCCC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	GAAGACATGAAGCGCTCAATGAGAGCCAGGAT
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TGACTGGGATAAGCACGCCACGCCTGGCGCGA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	GGAGATGAGTAAAGTGGTGCCAGCCTGGCATC
GTTCACTGCCGTGCAGGCAGCTTAGAAA	TACGGCGGGAATTGACACCACGACCACGGGGA
GTTCACTGCCGTGCAGGCAGCTTAGAAA	AACGACGGGCGCGGTCTTGATACGACGCTGCT
GTTCACTGCCGTGCAGGCAGCTTGGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017184.1\|WP_006174393.1\|1515609_1515930_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP017184.1\|WP_069598058.1\|1513109_1515050_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP017184.1\|WP_069598061.1\|1521843_1522827_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP017184.1\|WP_069598056.1\|1509226_1510885_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP017184.1\|WP_069598062.1\|1522823_1526057_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_CP017184.1\|WP_008499998.1\|1508240_1508936_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP017184.1\|WP_084833286.1\|1518393_1519548_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017184.1\|WP_069598064.1\|1527380_1528316_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP017184.1\|WP_069598060.1\|1519787_1520228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017184.1\|WP_069598066.1\|1530383_1530827_-\|DUF2384-domain-containing-protein	unknown	unknown	gnl\|CDD\|131346
NZ_CP017184.1\|WP_069598057.1\|1510881_1511838_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|377343
NZ_CP017184.1\|WP_014831269.1\|1515957_1518237_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP017184.1\|WP_069598065.1\|1529337_1529892_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP017184.1\|WP_008499991.1\|1532668_1533373_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP017184.1\|WP_023327014.1\|1528329_1529328_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP017184.1\|WP_002211347.1\|1532165_1532384_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP017184.1\|WP_023618360.1\|1511997_1513113_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP017184.1\|WP_045334129.1\|1529913_1530387_-\|RES-domain-containing-protein	unknown	unknown	gnl\|CDD\|227941
NZ_CP017184.1\|WP_008499993.1\|1515120_1515342_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP017184.1\|WP_069598063.1\|1526073_1527384_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866

Protein	Function_ID	Function_description	E-value
NZ_CP017184.1\|WP_069598061.1\|1521843_1522827_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP017184.1\|WP_069598058.1\|1513109_1515050_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP017184.1\|WP_069598056.1\|1509226_1510885_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP017184.1\|WP_069598062.1\|1522823_1526057_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP017184.1\|WP_008499998.1\|1508240_1508936_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	2.26411e-146
NZ_CP017184.1\|WP_084833286.1\|1518393_1519548_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.96747e-26
NZ_CP017184.1\|WP_069598064.1\|1527380_1528316_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	3.07928e-129
NZ_CP017184.1\|WP_006174393.1\|1515609_1515930_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	9.90991e-48
NZ_CP017184.1\|WP_069598066.1\|1530383_1530827_-\|DUF2384-domain-containing-protein	gnl\|CDD\|131346	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family. Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. This family was proposed by Makarova, et al. (2009) to be the antitoxin component of a new class of type 2 toxin-antitoxin system, or addiction module. [Cellular processes, Other].	3.03535e-47
NZ_CP017184.1\|WP_069598057.1\|1510881_1511838_-\|DUF535-domain-containing-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	7.25284e-123
NZ_CP017184.1\|WP_014831269.1\|1515957_1518237_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP017184.1\|WP_069598065.1\|1529337_1529892_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.42229e-94
NZ_CP017184.1\|WP_008499991.1\|1532668_1533373_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.8761e-140
NZ_CP017184.1\|WP_023327014.1\|1528329_1529328_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP017184.1\|WP_002211347.1\|1532165_1532384_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	2.9822e-48
NZ_CP017184.1\|WP_023618360.1\|1511997_1513113_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP017184.1\|WP_045334129.1\|1529913_1530387_-\|RES-domain-containing-protein	gnl\|CDD\|227941	COG5654, COG5654, Uncharacterized conserved protein [Function unknown].	2.45666e-28
NZ_CP017184.1\|WP_008499993.1\|1515120_1515342_-\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	6.50125e-48
NZ_CP017184.1\|WP_069598063.1\|1526073_1527384_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	1.73278e-166

>NZ_CP017184.1|WP_069598060.1|1519787_1520228_+|hypothetical-protein
MTDINNFAQLYSELSLNPDLPTLAERCKLLTEILLDCELLPQTQPVCRCLGAYLEEVKSGLTESMRDFQVVEFADEAEQPRQKEWLLEDTETKCDYCRALNHVLLVSHFDPDMLPHLTGLLHDIAHSIAADVVAPQRAETVVHIIS
>NZ_CP017184.1|WP_084833286.1|1518393_1519548_+|IS481-family-transposase
MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRHYGISPATGYKWLRRWAEEGAAGLQDHPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHRMPAFSTVHNLMARHGLLPGASPAIPVTGRFEHDAPNRLWQMDFKGNFPFGGGRCHPLTLLDDHSRFSLCLAHCTDERRETVQQRLVSVFERYGLPDRMTMDNGAPWGDTTGTWTALELWLMRHGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFANEGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARRYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLKAGNAFRGERVGLKEMQEDGRYEVWWYSTKVGVIDLKKKSITMGKGC
>NZ_CP017184.1|WP_014831269.1|1515957_1518237_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPNQASDSSNQVNNNEEQAGGEDRMENFTTNLNQLARVGGIDPLIGRDKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVIADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDVTEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPASKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLRTLGNRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTEVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDQAKNELTYDFQSAAKHKPEAAH
>NZ_CP017184.1|WP_006174393.1|1515609_1515930_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA
>NZ_CP017184.1|WP_008499993.1|1515120_1515342_-|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASLIVPIEAETVA
>NZ_CP017184.1|WP_069598058.1|1513109_1515050_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELKDIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLNAAQNVEVPAVYAGVERKKRLERAQMLLTRLGLAERVEYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIHDGELVSNPPPRDSRAAAPKEVLPASTGWGQFSSGFREALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRVGNVDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKANVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSAMAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLFLPGWEIGFSPVAIITAFLCSTFTGILFGWLPARNAARLDPVDALARE
>NZ_CP017184.1|WP_023618360.1|1511997_1513113_+|macrolide-transporter-subunit-MacA
MNLKGKRRTLFLLLAVVVLAGGYWLWQVLNAPVPQYQTLIVRPGELQQNVLATGKLDALRKVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAENQIREVEATLMELRAQRAQAQAERNLAQVTLTRQQALAKTQAISKQDLDTATTELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTKIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQNAWFTVLGDPQTRYEGVLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQLTGVKNVLTIPLSALGESAGDSRYKVKVLRNGETREREVVIGARNDTDVVVVKGLEEGEEVVISESLPGAAK
>NZ_CP017184.1|WP_069598057.1|1510881_1511838_-|DUF535-domain-containing-protein
MSSIVDTPFSNLPQPASGWQLFSHLASGKLTPGLAWQNPAYRRKFMLRSLATPVSTARLLTSLAKQPSLMQMLQVQPGLPCRLHRPWLTVNMDRQQALESLNWHYQTMSRHMPASLLSGYLSKKGFTLLTLTGKDEEQFTVRLCADAFLDKEGEATLAFCDHQNTVLAEMTFTLCQFEGKSTLFIGGLQGAKAHVPHELIQGATKACHGLFPKRLLVEAAMTLGTAFQVEQIVAVSNDTHIYRSWRYRKKKEGKLLADYDSFWISIGGEKQDSGNFMLPLVMPRKPMEEIASKKRSEYRRRYALLDSLIQQVNQATQR
>NZ_CP017184.1|WP_069598056.1|1509226_1510885_+|ATP-dependent-endonuclease
MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEDDLYHFVRDDFWFPPGDVTGREKHLHIILTFRESEPGRHRVRRFRPLSPCWVPCDDGFHRIFYRLEGEMAENEGVLTLRDFLDEKASPIPLDNIDDLARHLIRLTPVLRLRDARFMRRIRNGTVPNMPEVEVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTSESRHRLMRRRSHDEQRSWRYLDIINRMIDRPGGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLHPIMLSVAWHLLNLLPLQRVTTTNSGELLSLTPVEHVCRLVRESSRVSAYRLGPGGLNAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYASTVRSLLNNEREEERDHLTMLPAMDMEHFMYRQGFDDVFHRIAMVPVDVPMNMRRVIAKAIRRSSKPDLAIEVATEAGRRGVEAVPTLLRKMFSRVLWLARGRAD
>NZ_CP017184.1|WP_008499998.1|1508240_1508936_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKEVIGYIVAQVVGGIIAAGVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKHAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLFWVMPIIGGILGGVLYRTLLEKRD
>NZ_CP017184.1|WP_069598061.1|1521843_1522827_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MPANSITPTDLKTILHSKRANIYYLEKCRIQVNGGRVEYVTQEGKESFYWNIPIANTTAVMLGMGTSVTQMAMREFARAGVMVGFCGTDGTPLYSANEVDIDVSWLSPQSEYRPTAYLQNWVSFWFDEEKRLQAAKHFQLVRLLQIEKQWERLRMHRETPFQPDKVALETILDRARTGMENAQDHTSLMLQEAQLTKSLYKLTSQTVGYGSFTRAKRGGGADMANRFLDQGNYLAYGLAAVAAWVTGIPHGLAVMHGKTRRGGLVFDIADLIKDALVMPQAFVAAMEGEDSQQFRQRCINAFQQSDALDVMITTLQDTSQSLAGVAQ
>NZ_CP017184.1|WP_069598062.1|1522823_1526057_+|type-I-F-CRISPR-associated-helicase-Cas3
MNVLIISRCTKRAREQSCQIIDQFAERTGDAAWQTTMTMEGVNTLRKLLRKTARRNTAVACHWLKKNGQTELLWIVGNLRRFNAQGRVPTNRTTLQIIRNDGEHRWQSAESIALLAAIAGLFHDFGKAGMCFQQTLKGESQHVCQPYRHEWISVRLFEAFVGERSDEQWLASLTQLKAADEKAMLKALKMDRAEWSNSPLEKLPPVARVVAWLMLSHHRLPQPHPAKTSLLYSEGWIEKQLNADWNSLNHKSTDKHPWKTRDFKNVWTFPHGTPLKSQTWREKARQIGKRIRNLPALLQAGSLDNLFTLHLARLSLMLADHVYSSQPAYLAWQDVAVPCWANSDRQSGQLKQKLDEHNVGVAHQALLMGRSLPALRRSLPAIARHKTFRERAKESRFHWQNKAWDVASSLREKSAGQGFFGINMASTGCGKTYANARIMYALSDEQEGCRFSVALGLRTLTLQTGQALQSRLGLDDDTLAVVTGAAAVKELYQGNDAEDTSSASDETFFASHHYVHYEGATSSGIAQQWLAKEPALNRLVSAPVLVTTIDHLMPATEGVRGGRQIPAMLRLMTSDLVLDEPDDFDVDDLHTLCRLVNWAGMLGSRVLLSSATLPPALTEALFEAYREGRRAWQAACGQSDRPMSICCAWFDEYGAQSQDVADDAQFRQAHGDFVTQRIKRLPDQPRLRLGKLAAVEAHASRNADVVSALAQTLHQQMFALHGHHRSTHKSGKTVSFGLVRMANINPLVAVAQVLMALPSPDNYRIHYCVYHSQHPLAVRAAIEKRLDAAFTRHEPERVWQLPDVKQALTSPEQHHLFVVLGTSVLEVGRDFDADWGIIEPSSMRSLIQFAGRIQRHRQIVPENENLVILERNVRALRGEEIAYCRPGFETEHHLLPHHDLHELLSEEGYRTLNAIPRIVENLPGNALAALEHARLRAALLDGGDKSDAVAASWWRLPLTWNGELQRRTPFRRSSPQDTFFLSMEEEGDQPEFCLMQENGVLKPAGRFCEKSLSMAEGVEPWMAIDYGEVLQALAETKQMELGAVSRRYGEITLRISREEETEQWLYHPALGVFREYR
>NZ_CP017184.1|WP_069598063.1|1526073_1527384_+|type-I-F-CRISPR-associated-protein-Csy1
MSVEALSAFIAEYIAGRRQTKLEAFDKEAAKRSAEESATLAAERRELELRYEPKAWLTDAAKRAGQINLVTHAAKFTHGDSKSSSIYSEAVAQEGYLSTAALSGLEPDAVGNAAALDVAKLLQTRVNGGDSLLASLKRGDRAALAAFTDDANQLGEWIAGFSRALTSGEPASHKLAKQGYFPVGENYHLLSPLFATSLVHAMHQKMIAFRFGDDVKAIWKARREKTWHPTPLTLFPDSAEIHFGGTKPQNISYLNSVRGGRSWLLSCQPPQWKKADKPPTTLRSIFTLGGQFDRRANSTVQLLVSLLARTGDYTNVRIREARDEYIDALIDLLFVVASELQRDTWQNWTLSCERLVTHQQLWLDPWRTKTDEAFRLERDKDDWQVSVATDFALWLNARLSKALKDVGYVEQREWQTRERLRSNLREMEKIIREALK
>NZ_CP017184.1|WP_069598064.1|1527380_1528316_+|type-I-F-CRISPR-associated-protein-Csy2
MSSLILLRRVRVENANAIAGMTYGFPAITHFLGFSHALSRRLAETHELRIDGCAVISHEHQIHAHTSGRDYQFALTRNPLTRDAKTASFNEEGRMHMMVSLLLECHGEIPNGEYGQRDLAEHLRQVCPTLRLAGGIIVDIQDISVMAMPASAQEMGRLTWQLMPGFALRDRSGWLGEHHTTLLEHNPDATLLDAWLDFAALKIQAETPEDSDIQEGDPANWHVVPKPNPGYLVPLMTGYQRISELYAPGVVANARDAETPFAFTEAVYGVGEWCGLHRIRSLDEIFWRYRTTETGYYCQGAGAPVTSEFIN
>NZ_CP017184.1|WP_023327014.1|1528329_1529328_+|type-I-F-CRISPR-associated-protein-Csy3
MAKAPTAVKTASVLAFERKLATSDAVMYSGSWQGNQWQPIRIQEKAVRGTISNRLKNALTNDPAKLDAEIQKANLQRVDVASLPADADTLKVKFTLRVLGNLSTPSVCNDRAYQDELQQVIDGYITEHGFAELARRYATNLANGRFLWRNRVGAEKIIVNVTGSKSWTFDAYNYALRDFTASDESLNALAQEIEKGLSGGGFVLLNVEAQVLLGAGQEIFPSQELVLDSNSSKSRLLYQVDSVAGMHSQKIGNAIRTIDTWHPQVDALGAIAVEPYGSVTSRGVACRQPKEKMDFYTLLDNWVTKGLKPEVEQQHYVMAVLIRGGVFGEKGD
>NZ_CP017184.1|WP_069598065.1|1529337_1529892_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLEIRVLPDPEFSEEMLMAALVAKLHRALGQRGQGDIGISFPAYGLKPGPVLRVHGHHQALSELEALSWRKGLSDYCMSSDIQPVPVVNQWRCVSRVQVKSSAQRLMRRSVKKGWLTKEEAQQRLLTMQEARTDLPWLNLRSLSTGQSFKLFIRHGDLLSTPVSGMFTTYGLSATATVPWF
>NZ_CP017184.1|WP_045334129.1|1529913_1530387_-|RES-domain-containing-protein
MIFYRLVTGRYASEAWSGSGANQYGGRWNHKGHPAVYVSTSISLASLEILVHVRKDTVLNQYQLFSIDIPDDQIDYLDKAWLPEDWQENPAPVSTMDLGTGWLQANSALALILPSCIIPYENNAILNPLHPAFHSALNSVQQLPFIFDTRLAEKTAP
>NZ_CP017184.1|WP_069598066.1|1530383_1530827_-|DUF2384-domain-containing-protein
MRTWIPAQKPADNALWRYAGLPANRGMRLIEFLNQGLPVSVLDNIHEWTSMSKADILRVTGINERNVARRKSAGRTLTPGESERVARFVRVLDAAVDYFGSKEEAWTWLQAPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA
>NZ_CP017184.1|WP_002211347.1|1532165_1532384_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP017184.1|WP_008499991.1|1532668_1533373_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHNIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPEQFHLSRSMKRFHAKSPYRVTLNHAFGQVIEGCAEDRFEGTWITRDIITAYHQLHELGYAHSIEVWDGGALVGGMYGVAQGTLFCGESMFSRAVNASKTALLVFCQAFAQRGGRLIDCQVLNEHTASLGAVEIPRRQYIEHLDASRQEKLPRDFWIPRTLFMPNA

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Crispr_ID: NZ_CP017184_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017184_3

1531065-1532053

TypeI-F

I-F

Consensus_repeat	Method
GTGCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR
GTGCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder
GTGCACTGCCGTACAGGCAGCTTAGAAA	CRT

16 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NZ_CP017184_3

>merge|NZ_CP017184|3|1531065-1532053|PILER-CR,CRISPRCasFinder,CRT
GTGCACTGCCGTACAGGCAGCTTAGAAATGGTGACGCTACTGTCTTCACGACTCAGCAGCGTGCACTGCCGTACAGGCAGCTTAGAAATCTTGTACGCAAACATCTTACCGATTTTTTTAGTGCACTGCCGTACAGGCAGCTTAGAAACATCTCACGAGATATTTTTGAAAACGATGGATGTGCACTGCCGTACAGGCAGCTTAGAAATCCACGACGCAGCAAAGTTAATCCAGGGGGAAGTGCACTGCCGTACAGGCAGCTTAGAAAGCAAGCCTGCCGGACTTCTGGAGGATCTCTCCGTGCACTGCCGTACAGGCAGCTTAGAAAGACAAGCTGCTGCGTGAGTCCGGCTTCGATGAGTGCACTGCCGTACAGGCAGCTTAGAAAATCGTGGCGATCAGGTGTGACACCTCGGAAGAGTGCACTGCCGTACAGGCAGCTTAGAAAAACGACCGCAGCGAATATCACTGATGTGGTGAGTGCACTGCCGTACAGGCAGCTTAGAAATGGACCCGGTTTTCTGAGAAAAAAATGACAAAGTGCTCTGCCGTACAGGCAGCTTAGAAATGCTGCGCAATGGATGCCGCCGCCTGGTTGCCGTGCTCTGCCGTACAGGCAGCTTAGAAATGCGCGAAACCAGACCAGCGCACGCGCGTGGGGTGCTCTGCCGTACAGGCAGCTTAGAAAGTGGCGTCGTCGTTCGTGATCGCGGCGCGAATGTGCTCTGCCGTACAGGCAGCTTAGAAATCGTTATTATTCTCACCCGCCCGGGTAAAGCCGTGCACTGCCGTACAGGCAGCTTAGAAAAACCCGGTCGCAGTGTTTAACGCACTGGTCGAAGTGCACTGCCGTACAGGCAGCTTAGAAAGCTGGAATCAAAGTGATGGAGTGAGTATAAGGATGCACTGCCGCACACGCAGCTCAGCAAAATAGAAAATAAGGCCTAACAGTCGTCGCACCGTGCACTGTCGAACAGACAGCCCTGAAG

>NZ_CP017184|3|3|1531065-1531933|PILER-CR
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGTGACGCTACTGTCTTCACGACTCAGCAGC
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCTTGTACGCAAACATCTTACCGATTTTTTTA
GTGCACTGCCGTACAGGCAGCTTAGAAA	CATCTCACGAGATATTTTTGAAAACGATGGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCCACGACGCAGCAAAGTTAATCCAGGGGGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA	GCAAGCCTGCCGGACTTCTGGAGGATCTCTCC
GTGCACTGCCGTACAGGCAGCTTAGAAA	GACAAGCTGCTGCGTGAGTCCGGCTTCGATGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	ATCGTGGCGATCAGGTGTGACACCTCGGAAGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	AACGACCGCAGCGAATATCACTGATGTGGTGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGACCCGGTTTTCTGAGAAAAAAATGACAAA
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TGCTGCGCAATGGATGCCGCCGCCTGGTTGCC
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TGCGCGAAACCAGACCAGCGCACGCGCGTGGG
GTGCTCTGCCGTACAGGCAGCTTAGAAA	GTGGCGTCGTCGTTCGTGATCGCGGCGCGAAT
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TCGTTATTATTCTCACCCGCCCGGGTAAAGCC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AACCCGGTCGCAGTGTTTAACGCACTGGTCGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA

>NZ_CP017184|3|3|1531065-1532053|CRISPRCasFinder
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGTGACGCTACTGTCTTCACGACTCAGCAGC
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCTTGTACGCAAACATCTTACCGATTTTTTTA
GTGCACTGCCGTACAGGCAGCTTAGAAA	CATCTCACGAGATATTTTTGAAAACGATGGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCCACGACGCAGCAAAGTTAATCCAGGGGGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA	GCAAGCCTGCCGGACTTCTGGAGGATCTCTCC
GTGCACTGCCGTACAGGCAGCTTAGAAA	GACAAGCTGCTGCGTGAGTCCGGCTTCGATGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	ATCGTGGCGATCAGGTGTGACACCTCGGAAGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	AACGACCGCAGCGAATATCACTGATGTGGTGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGACCCGGTTTTCTGAGAAAAAAATGACAAA
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TGCTGCGCAATGGATGCCGCCGCCTGGTTGCC
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TGCGCGAAACCAGACCAGCGCACGCGCGTGGG
GTGCTCTGCCGTACAGGCAGCTTAGAAA	GTGGCGTCGTCGTTCGTGATCGCGGCGCGAAT
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TCGTTATTATTCTCACCCGCCCGGGTAAAGCC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AACCCGGTCGCAGTGTTTAACGCACTGGTCGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA	GCTGGAATCAAAGTGATGGAGTGAGTATAAGG
ATGCACTGCCGCACACGCAGCTCAGCAA	AATAGAAAATAAGGCCTAACAGTCGTCGCACC
GTGCACTGTCGAACAGACAGCCCTGAAG

>NZ_CP017184|3|3|1531065-1531993|CRT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGTGACGCTACTGTCTTCACGACTCAGCAGC
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCTTGTACGCAAACATCTTACCGATTTTTTTA
GTGCACTGCCGTACAGGCAGCTTAGAAA	CATCTCACGAGATATTTTTGAAAACGATGGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCCACGACGCAGCAAAGTTAATCCAGGGGGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA	GCAAGCCTGCCGGACTTCTGGAGGATCTCTCC
GTGCACTGCCGTACAGGCAGCTTAGAAA	GACAAGCTGCTGCGTGAGTCCGGCTTCGATGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	ATCGTGGCGATCAGGTGTGACACCTCGGAAGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	AACGACCGCAGCGAATATCACTGATGTGGTGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGACCCGGTTTTCTGAGAAAAAAATGACAAA
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TGCTGCGCAATGGATGCCGCCGCCTGGTTGCC
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TGCGCGAAACCAGACCAGCGCACGCGCGTGGG
GTGCTCTGCCGTACAGGCAGCTTAGAAA	GTGGCGTCGTCGTTCGTGATCGCGGCGCGAAT
GTGCTCTGCCGTACAGGCAGCTTAGAAA	TCGTTATTATTCTCACCCGCCCGGGTAAAGCC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AACCCGGTCGCAGTGTTTAACGCACTGGTCGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA	GCTGGAATCAAAGTGATGGAGTGAGTATAAGG
ATGCACTGCCGCACACGCAGCTCAGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017184.1\|WP_069598061.1\|1521843_1522827_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP017184.1\|WP_000228469.1\|1538533_1539028_+\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP017184.1\|WP_008499983.1\|1545026_1546319_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP017184.1\|WP_069598067.1\|1533418_1535140_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP017184.1\|WP_021240884.1\|1542966_1543581_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP017184.1\|WP_069598066.1\|1530383_1530827_-\|DUF2384-domain-containing-protein	unknown	unknown	gnl\|CDD\|131346
NZ_CP017184.1\|WP_069598062.1\|1522823_1526057_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_CP017184.1\|WP_084833286.1\|1518393_1519548_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017184.1\|WP_069598064.1\|1527380_1528316_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP017184.1\|WP_069598069.1\|1539163_1542838_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP017184.1\|WP_069598060.1\|1519787_1520228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017184.1\|WP_008499991.1\|1532668_1533373_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP017184.1\|WP_069598068.1\|1535139_1536906_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP017184.1\|WP_069598065.1\|1529337_1529892_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP017184.1\|WP_002211347.1\|1532165_1532384_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP017184.1\|WP_023327014.1\|1528329_1529328_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP017184.1\|WP_045334129.1\|1529913_1530387_-\|RES-domain-containing-protein	unknown	unknown	gnl\|CDD\|227941
NZ_CP017184.1\|WP_008499984.1\|1543590_1544934_+\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP017184.1\|WP_021240886.1\|1537020_1537989_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP017184.1\|WP_069598063.1\|1526073_1527384_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866

Protein	Function_ID	Function_description	E-value
NZ_CP017184.1\|WP_069598061.1\|1521843_1522827_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP017184.1\|WP_000228469.1\|1538533_1539028_+\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	1.61477e-117
NZ_CP017184.1\|WP_008499983.1\|1545026_1546319_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP017184.1\|WP_069598067.1\|1533418_1535140_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP017184.1\|WP_021240884.1\|1542966_1543581_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	3.46412e-116
NZ_CP017184.1\|WP_069598066.1\|1530383_1530827_-\|DUF2384-domain-containing-protein	gnl\|CDD\|131346	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family. Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. This family was proposed by Makarova, et al. (2009) to be the antitoxin component of a new class of type 2 toxin-antitoxin system, or addiction module. [Cellular processes, Other].	3.03535e-47
NZ_CP017184.1\|WP_069598062.1\|1522823_1526057_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP017184.1\|WP_084833286.1\|1518393_1519548_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.96747e-26
NZ_CP017184.1\|WP_069598064.1\|1527380_1528316_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	3.07928e-129
NZ_CP017184.1\|WP_069598069.1\|1539163_1542838_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP017184.1\|WP_008499991.1\|1532668_1533373_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.8761e-140
NZ_CP017184.1\|WP_069598068.1\|1535139_1536906_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP017184.1\|WP_069598065.1\|1529337_1529892_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.42229e-94
NZ_CP017184.1\|WP_002211347.1\|1532165_1532384_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	2.9822e-48
NZ_CP017184.1\|WP_023327014.1\|1528329_1529328_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP017184.1\|WP_045334129.1\|1529913_1530387_-\|RES-domain-containing-protein	gnl\|CDD\|227941	COG5654, COG5654, Uncharacterized conserved protein [Function unknown].	2.45666e-28
NZ_CP017184.1\|WP_008499984.1\|1543590_1544934_+\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP017184.1\|WP_021240886.1\|1537020_1537989_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP017184.1\|WP_069598063.1\|1526073_1527384_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	1.73278e-166

>NZ_CP017184.1|WP_069598066.1|1530383_1530827_-|DUF2384-domain-containing-protein
MRTWIPAQKPADNALWRYAGLPANRGMRLIEFLNQGLPVSVLDNIHEWTSMSKADILRVTGINERNVARRKSAGRTLTPGESERVARFVRVLDAAVDYFGSKEEAWTWLQAPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA
>NZ_CP017184.1|WP_045334129.1|1529913_1530387_-|RES-domain-containing-protein
MIFYRLVTGRYASEAWSGSGANQYGGRWNHKGHPAVYVSTSISLASLEILVHVRKDTVLNQYQLFSIDIPDDQIDYLDKAWLPEDWQENPAPVSTMDLGTGWLQANSALALILPSCIIPYENNAILNPLHPAFHSALNSVQQLPFIFDTRLAEKTAP
>NZ_CP017184.1|WP_069598065.1|1529337_1529892_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLEIRVLPDPEFSEEMLMAALVAKLHRALGQRGQGDIGISFPAYGLKPGPVLRVHGHHQALSELEALSWRKGLSDYCMSSDIQPVPVVNQWRCVSRVQVKSSAQRLMRRSVKKGWLTKEEAQQRLLTMQEARTDLPWLNLRSLSTGQSFKLFIRHGDLLSTPVSGMFTTYGLSATATVPWF
>NZ_CP017184.1|WP_023327014.1|1528329_1529328_+|type-I-F-CRISPR-associated-protein-Csy3
MAKAPTAVKTASVLAFERKLATSDAVMYSGSWQGNQWQPIRIQEKAVRGTISNRLKNALTNDPAKLDAEIQKANLQRVDVASLPADADTLKVKFTLRVLGNLSTPSVCNDRAYQDELQQVIDGYITEHGFAELARRYATNLANGRFLWRNRVGAEKIIVNVTGSKSWTFDAYNYALRDFTASDESLNALAQEIEKGLSGGGFVLLNVEAQVLLGAGQEIFPSQELVLDSNSSKSRLLYQVDSVAGMHSQKIGNAIRTIDTWHPQVDALGAIAVEPYGSVTSRGVACRQPKEKMDFYTLLDNWVTKGLKPEVEQQHYVMAVLIRGGVFGEKGD
>NZ_CP017184.1|WP_069598064.1|1527380_1528316_+|type-I-F-CRISPR-associated-protein-Csy2
MSSLILLRRVRVENANAIAGMTYGFPAITHFLGFSHALSRRLAETHELRIDGCAVISHEHQIHAHTSGRDYQFALTRNPLTRDAKTASFNEEGRMHMMVSLLLECHGEIPNGEYGQRDLAEHLRQVCPTLRLAGGIIVDIQDISVMAMPASAQEMGRLTWQLMPGFALRDRSGWLGEHHTTLLEHNPDATLLDAWLDFAALKIQAETPEDSDIQEGDPANWHVVPKPNPGYLVPLMTGYQRISELYAPGVVANARDAETPFAFTEAVYGVGEWCGLHRIRSLDEIFWRYRTTETGYYCQGAGAPVTSEFIN
>NZ_CP017184.1|WP_069598063.1|1526073_1527384_+|type-I-F-CRISPR-associated-protein-Csy1
MSVEALSAFIAEYIAGRRQTKLEAFDKEAAKRSAEESATLAAERRELELRYEPKAWLTDAAKRAGQINLVTHAAKFTHGDSKSSSIYSEAVAQEGYLSTAALSGLEPDAVGNAAALDVAKLLQTRVNGGDSLLASLKRGDRAALAAFTDDANQLGEWIAGFSRALTSGEPASHKLAKQGYFPVGENYHLLSPLFATSLVHAMHQKMIAFRFGDDVKAIWKARREKTWHPTPLTLFPDSAEIHFGGTKPQNISYLNSVRGGRSWLLSCQPPQWKKADKPPTTLRSIFTLGGQFDRRANSTVQLLVSLLARTGDYTNVRIREARDEYIDALIDLLFVVASELQRDTWQNWTLSCERLVTHQQLWLDPWRTKTDEAFRLERDKDDWQVSVATDFALWLNARLSKALKDVGYVEQREWQTRERLRSNLREMEKIIREALK
>NZ_CP017184.1|WP_069598062.1|1522823_1526057_+|type-I-F-CRISPR-associated-helicase-Cas3
MNVLIISRCTKRAREQSCQIIDQFAERTGDAAWQTTMTMEGVNTLRKLLRKTARRNTAVACHWLKKNGQTELLWIVGNLRRFNAQGRVPTNRTTLQIIRNDGEHRWQSAESIALLAAIAGLFHDFGKAGMCFQQTLKGESQHVCQPYRHEWISVRLFEAFVGERSDEQWLASLTQLKAADEKAMLKALKMDRAEWSNSPLEKLPPVARVVAWLMLSHHRLPQPHPAKTSLLYSEGWIEKQLNADWNSLNHKSTDKHPWKTRDFKNVWTFPHGTPLKSQTWREKARQIGKRIRNLPALLQAGSLDNLFTLHLARLSLMLADHVYSSQPAYLAWQDVAVPCWANSDRQSGQLKQKLDEHNVGVAHQALLMGRSLPALRRSLPAIARHKTFRERAKESRFHWQNKAWDVASSLREKSAGQGFFGINMASTGCGKTYANARIMYALSDEQEGCRFSVALGLRTLTLQTGQALQSRLGLDDDTLAVVTGAAAVKELYQGNDAEDTSSASDETFFASHHYVHYEGATSSGIAQQWLAKEPALNRLVSAPVLVTTIDHLMPATEGVRGGRQIPAMLRLMTSDLVLDEPDDFDVDDLHTLCRLVNWAGMLGSRVLLSSATLPPALTEALFEAYREGRRAWQAACGQSDRPMSICCAWFDEYGAQSQDVADDAQFRQAHGDFVTQRIKRLPDQPRLRLGKLAAVEAHASRNADVVSALAQTLHQQMFALHGHHRSTHKSGKTVSFGLVRMANINPLVAVAQVLMALPSPDNYRIHYCVYHSQHPLAVRAAIEKRLDAAFTRHEPERVWQLPDVKQALTSPEQHHLFVVLGTSVLEVGRDFDADWGIIEPSSMRSLIQFAGRIQRHRQIVPENENLVILERNVRALRGEEIAYCRPGFETEHHLLPHHDLHELLSEEGYRTLNAIPRIVENLPGNALAALEHARLRAALLDGGDKSDAVAASWWRLPLTWNGELQRRTPFRRSSPQDTFFLSMEEEGDQPEFCLMQENGVLKPAGRFCEKSLSMAEGVEPWMAIDYGEVLQALAETKQMELGAVSRRYGEITLRISREEETEQWLYHPALGVFREYR
>NZ_CP017184.1|WP_069598061.1|1521843_1522827_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MPANSITPTDLKTILHSKRANIYYLEKCRIQVNGGRVEYVTQEGKESFYWNIPIANTTAVMLGMGTSVTQMAMREFARAGVMVGFCGTDGTPLYSANEVDIDVSWLSPQSEYRPTAYLQNWVSFWFDEEKRLQAAKHFQLVRLLQIEKQWERLRMHRETPFQPDKVALETILDRARTGMENAQDHTSLMLQEAQLTKSLYKLTSQTVGYGSFTRAKRGGGADMANRFLDQGNYLAYGLAAVAAWVTGIPHGLAVMHGKTRRGGLVFDIADLIKDALVMPQAFVAAMEGEDSQQFRQRCINAFQQSDALDVMITTLQDTSQSLAGVAQ
>NZ_CP017184.1|WP_069598060.1|1519787_1520228_+|hypothetical-protein
MTDINNFAQLYSELSLNPDLPTLAERCKLLTEILLDCELLPQTQPVCRCLGAYLEEVKSGLTESMRDFQVVEFADEAEQPRQKEWLLEDTETKCDYCRALNHVLLVSHFDPDMLPHLTGLLHDIAHSIAADVVAPQRAETVVHIIS
>NZ_CP017184.1|WP_084833286.1|1518393_1519548_+|IS481-family-transposase
MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRHYGISPATGYKWLRRWAEEGAAGLQDHPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHRMPAFSTVHNLMARHGLLPGASPAIPVTGRFEHDAPNRLWQMDFKGNFPFGGGRCHPLTLLDDHSRFSLCLAHCTDERRETVQQRLVSVFERYGLPDRMTMDNGAPWGDTTGTWTALELWLMRHGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFANEGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARRYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLKAGNAFRGERVGLKEMQEDGRYEVWWYSTKVGVIDLKKKSITMGKGC
>NZ_CP017184.1|WP_002211347.1|1532165_1532384_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP017184.1|WP_008499991.1|1532668_1533373_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHNIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPEQFHLSRSMKRFHAKSPYRVTLNHAFGQVIEGCAEDRFEGTWITRDIITAYHQLHELGYAHSIEVWDGGALVGGMYGVAQGTLFCGESMFSRAVNASKTALLVFCQAFAQRGGRLIDCQVLNEHTASLGAVEIPRRQYIEHLDASRQEKLPRDFWIPRTLFMPNA
>NZ_CP017184.1|WP_069598067.1|1533418_1535140_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLTLGIVLAIVTLLASIGLLTLSGWFLSASAVAGFAGLYSFNYMLPAAGVRGTAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARFRQGELLNRVVADVDTLDHLYLRVISPIVGAFVVIVVVTLGLSVLDVPVALTLGGIMLLTLIVLPPLFYRAGKSTGENLTRLRGDYRQQLTAWLQGQAELTIFGASKRYRARMESTELNWHEAQRRQSELTAFSQALMMLIGGVAVIAMLWLASGDIGGNTQPGPLIALFVFCALAAFEALAPVTGAFQHLGQVIASALRITQIAEQKPEVTFSAGQTAVPEQVALTLEDVTFSYDKQAQNALDGITLSVNAGQRIAILGRTGCGKSTLLQLLTRAWDPQRGQICFNNTLLTDFSEQALRKTVSVVPQRVHLFSATLRDNLLLAAPEASDDALRAVLEQVGLHKLLEGDGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESQILDLLANVMTGKTVLMVTHRLRGLASFDRIIVMDNGHIIEQGSHAELLAKQGRYFQFKQRL
>NZ_CP017184.1|WP_069598068.1|1535139_1536906_-|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MEKTRQQELTRWLKQQSVLSRRWLTISRILGFISGLLIVAQAWLLARILNHMIMENIPREALLLPFIVLILIFILRAWVVWLRERVGFHAGQHIRYEIRRQVLDRLQEAGPAWIQGKPAGSWATLILEQIDDMHDYYARYLPQMALAVFVPLLIVIAIFPVNWMAALILMGTAPLIPLFMALVGMGAADANRRNFLALGRLSGHFLDRLRGMETLRIFGRGEAETENIRLASQDFRQRTMEVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGALDFGHYGTAVTLSAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFLETPLAHPERGDVTLNAKDPVTIEAQDFSILSPEGKVLAGPLNFTLPAGQRVVLVGISGSGKSSLLNALSGFMAYTGSLRINKTELRNLDPDAWRKQLSWVGQNPQLPAPTLRENVLLARPDAREDELQSVLDRAWVSEFLPLLPQGVDTVVGDQSAGLSVGQAQRVAVARALLNPCQLMLLDEPAASLDAHSEQRVMEALNAASLQQTTLMVTHQLEGIADWDQIWVMENGRIVEQGDYASLVAAQGPFATLLANRQEDI
>NZ_CP017184.1|WP_021240886.1|1537020_1537989_-|thioredoxin-disulfide-reductase
MGTAKHSKLLILGSGPAGYTAAVYAARANLHPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHAAKFETEILFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLANIASEVHLIHRRETFRAEKILIKRLMDKVASGNIVLHTNRTLEEVTGDQMGVAGLRIRDTQNTDNVETLEVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLAEQGK
>NZ_CP017184.1|WP_000228469.1|1538533_1539028_+|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP017184.1|WP_069598069.1|1539163_1542838_+|DNA-translocase-FtsK
MSQEYTEDKEVTLSKLSSGRRLLEALLIVIALFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGVPGAWLADTLFFIFGVMAYTLPVIIIGGCWFAWRHRQNDDYIDYFAVSLRLIGALALILTSCGLAAINADDIWYFASGGVIGSLLSSALQPMLHSSGGTLALLCIWAAGLTLFTGWSWVSIAEKIGSFILTILTFASNRTRRDDTWVDEDEYEDEEEDDAPVQRRESRRARILRGALARRQRVAEKFANPLGRKTDAALFSGKRMDEDEQVEYRAAGTAVDPDDVLFSGSRATPGDFDEYDPLLNGHSVTEPVAAAAAATTAAQAYAAPVDAVMPSAPVPPPESVIQQPQVDWQTAPGVHTPEPVIAPEPESYIPVQQEQWQQPYQPPQPEYAPQQYQQPVSQPYQEYVPEPVEPVQPYVAPQPEPEPEIVEEVKPARPPLYYFEEVEERRAREREQLAAWYQPVPEPVQEPVTKAPSVSVPPVDPTPAVAPVAEGVKQATAAAAAAAPVFSLATGGAPRPQVKEGIGPQLPRPNRVRVPTRRQLASYGIKLPSQRMAEEKARESEYDDDADEMQQDELARQFAAQQNQRYGQDYQHDEPALEDEDDAAEAELARQFAATQQQRYSGEQPAGANPFSLSDFEFSPMKDLVDDGPSEPLFTPSVMPEAEPVRQPSPSTYAQQPVQQPYVQPQQPQQQQFQQPAPQPQESLIHPLLMRNGDSRPLQRPSTPLPSLDLLTPPPAEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNTKFRDNPSPLTVVLGKDIAGDPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWSVNEMERRYKLMSALGVRNLAGYNEKIAEAARMGRPIPDPYWKPGDSMDAQHPVLEKLPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQGGAESLLGMGDMLYSGPNSTSPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDTESEGGGGGFDGGEELDPLFDQAVNFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP017184.1|WP_021240884.1|1542966_1543581_+|outer-membrane-lipoprotein-chaperone-LolA
MKKIAIACALLTSFVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGNAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATSNTPFMLIARNQASDWQQYNIKQTGDEFVLTPKGSNGNLKQFTINVSTNGTINQFGAVEQDDQRSSYQLKSQQNGAVDASKFTFTPPKGVTVDDQRNK
>NZ_CP017184.1|WP_008499984.1|1543590_1544934_+|replication-associated-recombination-protein-RarA
MGNLSLDFSDNAFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIFFIGATTENPSFELNSALLSRARVYLLKSLTTEDIEKVLTQAMDDKSRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDAGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMSDARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEEYFPQEMAQTRYYHPTNRGLEGKIGEKLTWLAGQDQNSPIKRYR
>NZ_CP017184.1|WP_008499983.1|1545026_1546319_+|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDQAKAELDVLQAEIRDIALAIPNIPDDSVPVGKDENDNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGSRFVVMKGQIAHLHRALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEADSSNYALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEESMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPEVLRPYMKGQQYIG

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Crispr_ID: NZ_CP017184_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017184_4

3601003-3601108

Orphan

Consensus_repeat	Method
AAAAAAGGTGGTACAGGGTGGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017184_4

>merge|NZ_CP017184|4|3601003-3601108|CRISPRCasFinder
AAAAAAGGTGGTACAGGGTGGGACAAGTGGTACACGTAGAGCTGGCGCGGGTTACAGCGTCCCACTTTAGATAATCTGGTTTAAAAAAGTGGTACAGGGTGGGACA

>NZ_CP017184|4|4|3601003-3601108|CRISPRCasFinder
AAAAAAGGTGGTACAGGGTGGGACA	AGTGGTACACGTAGAGCTGGCGCGGGTTACAGCGTCCCACTTTAGATAATCTGGTT
TAAAAAAGTGGTACAGGGTGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017184.1\|WP_008502502.1\|3590895_3591234_+\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|183190
NZ_CP017184.1\|WP_126307388.1\|3611591_3612278_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372995
NZ_CP017184.1\|WP_071965107.1\|3610488_3611595_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP017184.1\|WP_069598693.1\|3598657_3598873_+\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP017184.1\|WP_069598697.1\|3608691_3609999_+\|calmodulin-binding-protein	unknown	unknown	gnl\|CDD\|370821
NZ_CP017184.1\|WP_126307427.1\|3605408_3605765_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377742
NZ_CP017184.1\|WP_167352773.1\|3597807_3598323_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273148
NZ_CP017184.1\|WP_069598694.1\|3604994_3605324_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017184.1\|WP_167352774.1\|3601515_3604998_+\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|273730
NZ_CP017184.1\|WP_008502503.1\|3591342_3591630_-\|RnfH-family-protein	unknown	unknown	gnl\|CDD\|234982
NZ_CP017184.1\|WP_069598696.1\|3606538_3608695_+\|AAA-domain-containing-protein	unknown	unknown	gnl\|CDD\|183088
NZ_CP017184.1\|WP_023325904.1\|3591619_3592096_-\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP017184.1\|WP_069598692.1\|3597182_3597731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017184.1\|WP_000362947.1\|3595558_3596731_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017184.1\|WP_069598699.1\|3613283_3614330_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|185333
NZ_CP017184.1\|WP_069598691.1\|3594564_3595209_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017184.1\|WP_069598690.1\|3593315_3594563_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|170049
NZ_CP017184.1\|WP_069598700.1\|3614313_3615090_-\|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein	unknown	unknown	gnl\|CDD\|379346
NZ_CP017184.1\|WP_069598695.1\|3605671_3605953_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226909
NZ_CP017184.1\|WP_008502505.1\|3592213_3592696_+\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455

Protein	Function_ID	Function_description	E-value
NZ_CP017184.1\|WP_008502502.1\|3590895_3591234_+\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|183190	PRK11548, PRK11548, outer membrane protein assembly factor BamE.	8.38264e-81
NZ_CP017184.1\|WP_126307388.1\|3611591_3612278_+\|hypothetical-protein	gnl\|CDD\|372995	pfam14279, HNH_5, HNH endonuclease. This domain is related to other HNH domain families such as pfam01844. Suggesting that these proteins have a nucleic acid cleaving function.	0.000421879
NZ_CP017184.1\|WP_069598693.1\|3598657_3598873_+\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.45979e-21
NZ_CP017184.1\|WP_069598697.1\|3608691_3609999_+\|calmodulin-binding-protein	gnl\|CDD\|370821	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component. Members of this family of bacterial proteins modify the specificity of mcrB restriction by expanding the range of modified sequences restricted.	1.28853e-80
NZ_CP017184.1\|WP_126307427.1\|3605408_3605765_+\|hypothetical-protein	gnl\|CDD\|377742	pfam06958, Pyocin_S, S-type Pyocin. This family represents a conserved region approximately 180 residues long within bacterial S-type pyocins. Pyocins are polypeptide toxins produced by, and active against, bacteria. S-type pyocins cause cell death by DNA breakdown due to endonuclease activity.	4.79871e-08
NZ_CP017184.1\|WP_167352773.1\|3597807_3598323_+\|hypothetical-protein	gnl\|CDD\|273148	TIGR00575, DNA_ligase, DNA ligase, NAD-dependent. All proteins in this family with known functions are NAD-dependent DNA ligases. Functions of these proteins include DNA repair, DNA replication, and DNA recombination. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The member of this family from Treponema pallidum differs in having three rather than just one copy of the BRCT (BRCA1 C Terminus) domain (pfam00533) at the C-terminus. It is included in the seed. [DNA metabolism, DNA replication, recombination, and repair].	9.79476e-22
NZ_CP017184.1\|WP_071965107.1\|3610488_3611595_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	2.01317e-07
NZ_CP017184.1\|WP_008502503.1\|3591342_3591630_-\|RnfH-family-protein	gnl\|CDD\|234982	PRK01777, PRK01777, RnfH family protein.	1.76501e-48
NZ_CP017184.1\|WP_069598696.1\|3606538_3608695_+\|AAA-domain-containing-protein	gnl\|CDD\|183088	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.	4.12567e-26
NZ_CP017184.1\|WP_023325904.1\|3591619_3592096_-\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	4.10325e-112
NZ_CP017184.1\|WP_069598699.1\|3613283_3614330_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|185333	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada.	3.74483e-63
NZ_CP017184.1\|WP_167352774.1\|3601515_3604998_+\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|273730	TIGR01646, conserved_hypothetical_protein, Rhs element Vgr protein. This model represents the Vgr family of proteins, associated with some classes of Rhs elements. This model does not include a large octapeptide repeat region, VGXXXXXX, found in the Vgr of Rhs classes G and E.	1.59815e-88
NZ_CP017184.1\|WP_069598690.1\|3593315_3594563_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	1.33804e-144
NZ_CP017184.1\|WP_069598700.1\|3614313_3615090_-\|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein	gnl\|CDD\|379346	pfam13714, PEP_mutase, Phosphoenolpyruvate phosphomutase. This domain includes the enzyme Phosphoenolpyruvate phosphomutase (EC:5.4.2.9). This protein has been characterized as catalyzing the formation of a carbon-phosphorus bond by converting phosphoenolpyruvate (PEP) to phosphonopyruvate (P-Pyr). This enzyme has a TIM barrel fold.	3.00363e-91
NZ_CP017184.1\|WP_069598695.1\|3605671_3605953_+\|hypothetical-protein	gnl\|CDD\|226909	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	6.28077e-22
NZ_CP017184.1\|WP_008502505.1\|3592213_3592696_+\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	3.70908e-87

>NZ_CP017184.1|WP_069598693.1|3598657_3598873_+|AlpA-family-transcriptional-regulator
MKTSADSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKNTDFPRPVHLSSRLVVFDAAEIRQWQQRRTAIR
>NZ_CP017184.1|WP_167352773.1|3597807_3598323_+|hypothetical-protein
MSIHLTCTKNTYGLLNSGSPYSACWRFFEPRGVHIHQLGQTMLKQLVEKCYVQKPLDMFSMTAGKLTGLDQSGPKLASIICRGIEQAKDVQLGELLFACGIYGVEEEEAWLLAKRFSNLEALYGASIDSLMSYNLLNEAVAVNTYNFFRHPLNVSALNELQTEGGLKVRHG
>NZ_CP017184.1|WP_069598692.1|3597182_3597731_+|hypothetical-protein
MSDYSYLSILKTRAKKLARIQKIKLSKALEIVARDAKFTSYHELSEVAKRAPLEQRLVFAAIGEDTQEDVIYRDEIFYAIDREVEDMLSGDIAETNAYGFSIENLEATSINYDPKRGILVVQVIFDYQGEQDSERPFSGSSFEIVAKMELLLRDNVWSLVENSLELTSVNSNVDNDWYDLDI
>NZ_CP017184.1|WP_000362947.1|3595558_3596731_-|hypothetical-protein
MDLFSTKIARNKLNHNFKTIYTDPKLAPVRAVIQSWGRGLLERSGEQTKFINEFQTTFNSSMWELYLNEMFIRLGYSVDYTKDSPDFCVSTPLGYKFNVEAMVSDKPHKPPVSEIFSEAKFKHQSTLKLLGKIKDKRDLFTGINGKKFPYSTMEHVIGKPFVLALAPFDSDLSLTQNNTIINRVLFGIEEPTMRDLVNGRQRRVLSIKKNEDTEIPLGIFTNDSYKEISAIVFSTTGTFGKAIVQSRVDRYVRYTRFRALDVNVFIANEGMKNEGSHTRKLGPDHYVTTKRQFYNNEVVGADIVMCRTRDYKETHFDGLHVYYNPYASVPLDKNVFFPPEITHNFYDIENDIPDQRHPDGALVSRQVFEISKVCRRHIINNWFPEQSKVL
>NZ_CP017184.1|WP_069598691.1|3594564_3595209_+|hypothetical-protein
MSSPIRQNLFERECDMPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPPEIKARSLKAVMKLSRNSRGRKWLKTFGDDALPDLTTSAQPSQRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDRILRKLRALAQERELPSDGLGRGTFYEVLKMGREKEV
>NZ_CP017184.1|WP_069598690.1|3593315_3594563_+|tyrosine-type-recombinase/integrase
MPKQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLWQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDIWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQVMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSIARTAGAGHFPREVLESALAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
>NZ_CP017184.1|WP_008502505.1|3592213_3592696_+|SsrA-binding-protein-SmpB
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAFLFGANFTPLTVASSHYVCDPTRTRKLLLNKRELESLYGRINREGFTVVALSLYWKNAWCKVKVGVAKGKKQHDKRTDLKEREWQLDKARIMKNAGR
>NZ_CP017184.1|WP_023325904.1|3591619_3592096_-|type-II-toxin-antitoxin-system-RatA-family-toxin
MLLFVRCVTMGNAMPQISRTALVPYSAEQMYQLVNDVQSYPEFIPGCTGSRVLESGPTQMTAAVDVSKAGISKTFTTRNTLTNNQSILMHLVDGPFKTLMGGWKFTPLSADACRIEFHLDFEFTNKLIELAFGRIFKELASNMVQAFTTRAKEVYSVA
>NZ_CP017184.1|WP_008502503.1|3591342_3591630_-|RnfH-family-protein
MSHKIAVEVVYALPEKQYLQRVTLEEGATVEAAIRASGILELRSDIDLAKNKVGIYSRPVKLGDVLKEGDRVEIYRPLIADPKELRRQRAEKASK
>NZ_CP017184.1|WP_008502502.1|3590895_3591234_+|outer-membrane-protein-assembly-factor-BamE
MRCKMLTAAAAVLLMLTAGCSTLEKVVYRPDINQGNYLTPNDVSKIRVGMTQQQVAYALGTPMMSDPFGTNTWFYVFRQKPGHEDATQQTLTLTFSSAGVLTNIDNKPALTK
>NZ_CP017184.1|WP_167352774.1|3601515_3604998_+|type-VI-secretion-system-tip-protein-VgrG
MDNWSALFDGQTRYFLDINDSPVKADVLRFRGREALSEPFKWDIEFTTQQANILPEQVLMKYASFRMRSGKNVHGMVTRLEWLSISADQSHYRLTLSSRLALLKYTRQCAVWQNQSVPEVVEQVLRKHGLEGPDFEFRLEHSYPARELITQWQETDLQFIQRILSEVGIYWRTEMDNTRELDVYIFADSQLNYRFDVRLPYREPSGLFDGAAESVWDVRTWHRVVTATVATRDYNYRTATTPMDAVISVRSGEVTTGEHYRYKEPYREAGDDNDPEPETESGAFYARLHHERELNKSARIHLFSNASHLAPGQVLEPQGDVITAMKEGVILTLVTFRGGRDSRLHVSVWGMPYTERYCFRPAEMPRPEIHGTLPARIESREKNDIYAHLDEYGRYRVRLDFDREESEPGYAYLWLRMAKPCSGDTYGWHTPLTDGSEVAMAYSNGDIDLPYISHALHDSEHPDIVNRDNRSQNILRTAAENELRMEDRRGEEHIALTTPYGATQLNTGHLVDVQDKLRGTGTELRTDEHGVIRAGKGLFVSADTQAKAQGEVLDMSAALKEIDRLNQQLQQLEIAAEQALALKADVDSQIRMFEQRLKPLNEALLMSAPAGMALTSGEHLQLAASKNVAISAGGDISTGVMGNMTALAGEKLGLFARTGQLNLKSGEGAVEALAQNGNMRLFAEKKLTMSSASDISFAGKKRITLIGGGSYLRLEAGKIEYGTTATYMRRVKRTMAAARSALPLNTSPLPPPATMREFNPETLTPWVTPVYAKSCLKEKGCTDAGTTDEPVENFGQMTIFAQSVEDDCCGYGHQHAHVEDEGVVQHAQSAKKSKSDAGSEKAPAEASAAPLVLGAATGVMTQVWGEWSLTGTLGAARSIPYVGAMMSALYVPSAGEGSANVPGRDEFWCQEELRQKALTGAKATTRVRFFWRQDEQGNMRVYGIHTGEGTPYEGVRTAEMKWVEKNNRYEFTPAHGVDGPLITWTPERPENGDIPSHTGSNISPIDQATILVTPIPDGKDEYTTPPFPVPEERDLNDYILVFPADSGIKPIYVYLNEVKTSYTHGYKHYPPKNKSWNEVVKNTKSGPAKFKPEVNIESIDHDVWENGTPTTNGQNWKIKEFDSVQGAYKGKETNWVVTKESQGTIHSHPIGPQEAGKLIK
>NZ_CP017184.1|WP_069598694.1|3604994_3605324_+|hypothetical-protein
MKKYYRILGEVQQLDNVANIYDELSSLDFTKSIFEQANKLDEDLFQLTFINGNIIDIGWYPAFEEDGEFIIQVISDENWDEPAFKASSSWDKNELIEKVNDALINCPSS
>NZ_CP017184.1|WP_126307427.1|3605408_3605765_+|hypothetical-protein
MVFALYIPSAGEDSGNVPGRDEFWYEEELRQKALAGAKATTRVRFFWRQDEQGNMRFYGVHTGEYGSTHLTTLTASRARLRISGSAILCSIPFRFLRFWNGWRPPRCLRACLKPSDET
>NZ_CP017184.1|WP_069598695.1|3605671_3605953_+|hypothetical-protein
MLDTLSVPAFLEWLASTALFTRLPEAQRRNLNALLPTILNSDDELAFATIAAFFHEMTHQRYVIPLLHHWMEFATEKSFTWRDLNTLGWPDFS
>NZ_CP017184.1|WP_069598696.1|3606538_3608695_+|AAA-domain-containing-protein
MLEVEFQEWLKSKGAKTQAGLNSRIYAVKTIEKNLAALGSPHADLDAAYKADGFAQLRQRIKEIRRDAKDNGDDYRLLMPESEQPLNRLSNWNSWLGQYGRFLSGDDSQADEIRDYVLENYITPARERGDASVTLVVGPLNTEMGLDKGWPNICQALDGQKFQELADVPPPVTEGPKKSTTRKYTFILTEGSELVAQTKPTPTNLIFYGPPGTGKTYHTAREAVALCDGKDAYPNSKDGRAALMARYNELMAEKRISFVTFHQSYDYETFVEGLRPEIGEDESSSAGFRLMPTPGLFREICALADQARTQPRAQTDASALQLSQKRFWKMGQGTIGTEDDVYEDARDNGYIALGWGGTIDWSADRFSSFNAIHDEWIKQNPGNLTPSNWTQTYPFRCEMKPGDIVIVPYGNTAFRAIAEITGDYYFVPEAEGYYAHRRPVRWLLTLDEPLPLDTIIDGNFTMRTLYSIATSRVNIPALGRLLSSTENLDNSSDVKGQPEQFVLIIDEINRANISKVFGELITLIEPDKRLGMPDALTVTLPYSKKKDFGIPANLHIIGTMNTADRSIALLDTALRRRFNFREMAPDATLLSEVEGIDLKAVLTIINQRIEYLIGREYRIGHAFFINCESRAQVEDAVRNKVIPLLQEYFFEDWSRIAAVLGDGFMQEEQILPPPGIEGELLSSWSVRAPFRNDAFDRLIGKTRTLNVTALEVAGESKE
>NZ_CP017184.1|WP_069598697.1|3608691_3609999_+|calmodulin-binding-protein
MTHLTVREWGGVCVNTESSINAPHAFTRLQANALLTAAREHPLANQHGTNILIDRHNKIIAGQMVGVIAAPGCSLEILPKFDDETIEPDATIRSRLIRMLDVALGLKLGNGQAATMARQAESLLEILIRLFAERLLSEVHRGLPRTYLAQEDDLPSLRGRLNIKRQFTTLAVRPDRLACRYDELSADTALLRIMKACVVLLHHYARAADTLRRLNELRILLAGVSDVPFSHLPWSQVRIDRTNHRWEALYNLARLLLRRDWQATHHDKRAQNGITLLFPMNDLFEAYIAALAKRAVRGTEWTVRAQAGRLYCLIEDVKEGKPRFQTRPDLLIERDHQIVMIIDTKWKRIGCHPEDARHGISQADVYQMMAYARIYHCPQVMLLYPHHAGLGTQPLNAGYRILAGKEQLQVASVDLILDEDKIVGQLINLLGINTQ
>NZ_CP017184.1|WP_071965107.1|3610488_3611595_+|AAA-family-ATPase
MEFSGNNRFTYIIGNNGSGKSRALEENAERLSESRDVVVIASGVSDKFKFRSQIKKTANGSYRYLGNRTVGNGTHNGTLAANAVLLYLAILDTDLCPALMKFLKEIGFEGKFGISYRKTKFSKTQPFDTQELTNDFAALNKEMLETKERPFEAVFYKNDTPYPFSDLSSGEQYIITTALKIVTSIKGGVCYFIDEPEVSLHVEWQVKWPELFHPLLSLKNDVNCYIATHSPVIISSALQMGADCYNLFNGELSKIIDNEFNVERILYKNFNTLPPDNKYIFEELAAIVTKTIDDLTAENITRGNYNRTEKSTLASVEEFKRKLKLASHTEKDSDDIKRTLDDFDMAIKDLIAMSKHSGVTNNLQGETE
>NZ_CP017184.1|WP_126307388.1|3611591_3612278_+|hypothetical-protein
MKLLREVRKSYSQAKKIKEATNKAIDYYDKSRNGTTKLWSKLYNDGPVGRRVYNAITDYVHGLSNRCGYCQDRIFHNSNSNIDHILPSSIYPQFTFVEENLVRVCMTCNMIKSAHDYYALPVSIGNGYRQHTSTWVCYHPRHHIFSQHIDRLVVQTNHLHFRAYIGKTSQGKKLCSMLLQKVSEFEVRSTANPVVAQAAQKLSQFIQSKGSMPSDAVNNLLQSLVTNT
>NZ_CP017184.1|WP_069598699.1|3613283_3614330_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MKITDKNLCDIWYQALLERASDYTGVFFVGVKTTGVFCISVCRARKPKRENVEFYKDAKSALADGFRPCKVCRPAENAHSAPLFVEQALALVRRDIKSRVADAELRQHGISPERVRRWFLQHHGITFQAFQRMQRVNVALQELKSGRAATDVALDNGYESLSGFGYTYKRLTGAAPTQATQVIVIHRFTTTLGPMFVCATDRGVCLLEFTDRRMLETEFRDIQRLFNARIVTGENSHTRQTVKEIGEYFAGTRRQFDLALDAPGSDFQQSVWHALRAVPYGLTSHYQAISLRLNKPNAVRAVAAANGANRIAIVIPCHRIIGKDGAMTGYGGGISRKEWLIEHERNYV
>NZ_CP017184.1|WP_069598700.1|3614313_3615090_-|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein
MNFAERHYQHVPLLIANVWDAASAVAAQKAGYQVLGTSSAAIASTLGYDDGQGVPFDELFYMVTRIRAASNLPLSVDMEAGYGDSAEEIADNLRRLAQTGVAGVNLEDSRVINGVRQLDDASDFSRNLRTVCDTLRSENYSLFLNIRTDTYLLGHEDALQETILRGQRYKAAGADGLFVPCLTSEKDISLIAEATGLPLNVMCMPDLPSFDRLKRAGVSRISMGNFVHSAMQSTLTDVMHAIRSRQTFEGLFGDENNR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	MT740315	Escherichia phage JEP4, complete genome	34327-34358	0	1.0
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	MN855665	Bacteriophage sp. isolate 358, complete genome	3736-3767	1	0.969
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	MT261384	Salmonella virus PAT1, complete genome	28828-28859	2	0.938
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	MT580116	Salmonella phage 65FD, complete genome	14156-14187	2	0.938
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	MT580117	Salmonella phage 66FD, complete genome	4994-5025	2	0.938
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NC_004775	Enterobacteria phage epsilon15, complete genome	3987-4018	2	0.938
NZ_CP017184_3	3.7\|1531453\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531453-1531484	32	KC911857	Salmonella phage SPC32N, complete genome	2998-3029	2	0.938
NZ_CP017184_3	3.7\|1531453\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531453-1531484	32	KC911856	Salmonella phage SPC32H, complete genome	2998-3029	2	0.938
NZ_CP017184_3	3.7\|1531453\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531453-1531484	32	MT261384	Salmonella virus PAT1, complete genome	27406-27437	2	0.938
NZ_CP017184_3	3.7\|1531453\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531453-1531484	32	NC_016761	Salmonella phage SPN1S, complete genome	3026-3057	2	0.938
NZ_CP017184_3	3.7\|1531453\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531453-1531484	32	MT580116	Salmonella phage 65FD, complete genome	15578-15609	2	0.938
NZ_CP017184_3	3.7\|1531453\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531453-1531484	32	JQ691610	Salmonella phage SPN9TCW, complete genome	3027-3058	2	0.938
NZ_CP017184_3	3.7\|1531453\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531453-1531484	32	MT580117	Salmonella phage 66FD, complete genome	6416-6447	2	0.938
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	NZ_CP039495	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence	29762-29793	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	KY709687	Salmonella phage 29485, complete genome	4350-4381	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	KU927496	Salmonella phage 101962B_sal5, complete genome	18422-18453	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	MW013502	Salmonella virus L cI-40 13-am43, complete genome	36631-36662	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	KU927491	Salmonella phage 146851_sal5, complete genome	19188-19219	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	KU927495	Salmonella phage 103203_sal4, complete genome	18685-18716	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	KU927498	Salmonella phage 64795_sal4, complete genome	37708-37739	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	NC_004348	Enterobacteria phage ST64T, complete genome	19833-19864	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	MW013503	Salmonella virus L cII-101, complete genome	36632-36663	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	KU927492	Salmonella phage 146851_sal4, complete genome	37718-37749	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	NC_030919	Salmonella phage 118970_sal4, complete genome	18714-18745	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	NC_028696	Salmonella phage SEN22, complete genome	36184-36215	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	NC_017985	Salmonella phage SPN9CC, complete genome	18419-18450	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	19833-19864	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	MF188997	Salmonella phage vB_SalP_PM43, complete genome	19728-19759	3	0.906
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	NC_031946	Salmonella Phage 103203_sal5, complete genome	38598-38629	3	0.906
NZ_CP017184_3	3.7\|1531453\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531453-1531484	32	JQ182729	Enterobacterial phage mEp390, complete genome	27670-27701	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NZ_CP039495	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence	27736-27767	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NC_011802	Salmonella enterica bacteriophage SE1, complete genome	17478-17509	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	CP051272	Salmonella phage SW-70, complete genome	33397-33428	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	CP051278	Salmonella phage ST-87, complete genome	28290-28321	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	CP051288	Salmonella phage ST-29, complete genome	256-287	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	CP051285	Salmonella phage ST-32, complete genome	34224-34255	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972697	Salmonella phage SF10, complete genome	37074-37105	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972696	Salmonella phage Si3 KFo-2019, complete genome	36939-36970	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MH370364	Salmonella phage S107, complete genome	43561-43592	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MH370382	Salmonella phage S135, complete genome	44334-44365	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NC_014900	Salmonella phage ST160, complete genome	17546-17577	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MH370383	Salmonella phage S137, complete genome	44336-44367	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972695	Salmonella phage SI5, complete genome	1593-1624	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972688	Salmonella phage SI8, complete genome	38492-38523	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NC_047875	Salmonella phage UPF_BP1, complete genome	6315-6346	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972689	Salmonella phage SF6, complete genome	25172-25203	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NC_005344	Enterobacteria phage Sf6, complete genome	31212-31243	3	0.906
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NC_002166	Bacteriophage HK022, complete genome	33613-33644	4	0.875
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	AF069308	Escherichia virus HK022, complete genome	33613-33644	4	0.875
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	881261-881292	5	0.844
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	700755-700786	5	0.844
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	NC_016158	Escherichia phage HK639, complete genome	40793-40824	5	0.844
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	MN856003	Bacteriophage sp. isolate 1, complete genome	32020-32051	5	0.844
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	NC_019717	Enterobacteria phage HK225, complete genome	37344-37375	5	0.844
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	149185-149216	5	0.844
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972693	Salmonella phage SI23, complete genome	10960-10991	5	0.844
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK770415	Salmonella phage SF11, complete genome	10638-10669	5	0.844
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972694	Salmonella phage SE22, complete genome	32048-32079	5	0.844
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK770414	Salmonella phage SE16, complete genome	14534-14565	5	0.844
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972686	Salmonella phage SF3, complete genome	33988-34019	5	0.844
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972685	Salmonella phage SE10, complete genome	35207-35238	5	0.844
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972687	Salmonella phage SE1 (in:P22virus), complete genome	25481-25512	5	0.844
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	MK972692	Salmonella phage SE21, complete genome	31184-31215	5	0.844
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	AP013541	Uncultured phage_MedDCM-OCT-S42-C7 DNA, complete genome, group G8, isolate: uvMED-CGR-C97-MedDCM-OCT-S42-C7	33355-33386	6	0.812
NZ_CP017184_1	1.5\|1503287\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503287-1503318	32	NZ_CP029211	Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence	88162-88193	6	0.812
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	NZ_CP024865	Escherichia coli strain AR_0015 plasmid unitig_3_pilon, complete sequence	12004-12035	6	0.812
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	MN187550	Escherichia phage phiv142-3, complete genome	28683-28714	6	0.812
NZ_CP017184_1	1.15\|1503889\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503889-1503920	32	NZ_CP030841	Acidisarcina polymorpha strain SBC82 plasmid pACPOL1, complete sequence	53938-53969	6	0.812
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	372615-372646	6	0.812
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1440452-1440483	6	0.812
NZ_CP017184_3	3.10\|1531633\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531633-1531664	32	NZ_CP029540	Aquitalea sp. USM4 plasmid unnamed, complete sequence	1681-1712	6	0.812
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	692702-692733	7	0.781
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NC_006462	Thermus thermophilus HB8 plasmid pTT27, complete sequence	197293-197324	7	0.781
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NC_017588	Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence	48688-48719	7	0.781
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	12114-12145	7	0.781
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NZ_LR027520	Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence	78415-78446	7	0.781
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	37238-37269	7	0.781
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	CP000620	Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence	67029-67060	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	25955-25986	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	25955-25986	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	25892-25923	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	MG969415	UNVERIFIED: Salmonella phage GE_vB_TR, complete genome	18807-18838	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	KR296686	Salmonella phage 22, complete genome	21694-21725	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	MT774487	Salmonella phage MG40, complete genome	23078-23109	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	L06296	Bacteriophage P22 eaA - eaI genes, complete cds	4644-4675	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	NC_002371	Enterobacteria phage P22 virus, complete genome	25955-25986	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	KR296688	Salmonella phage 34, complete genome	31883-31914	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	AF217253	Bacteriophage P22 complete genome	7706-7737	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	JQ806764	Salmonella phage vB_SosS_Oslo, complete genome	30058-30089	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	MH370364	Salmonella phage S107, complete genome	32423-32454	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	KR296687	Salmonella phage 25, complete genome	31890-31921	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	25892-25923	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	MH370382	Salmonella phage S135, complete genome	32423-32454	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	MH370383	Salmonella phage S137, complete genome	32423-32454	7	0.781
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	AF527608	Bacteriophage P22-pbi, complete sequence	25955-25986	7	0.781
NZ_CP017184_1	1.15\|1503889\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503889-1503920	32	AP013379	Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C43	4860-4891	7	0.781
NZ_CP017184_2	2.1\|1520432\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1520432-1520463	32	NZ_CP013426	Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence	222905-222936	7	0.781
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	77909-77940	7	0.781
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP016820	Rhodococcus sp. p52 plasmid pDF02, complete sequence	28718-28749	7	0.781
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP023713	Rhodococcus ruber strain YC-YT1 plasmid unnamed2, complete sequence	27864-27895	7	0.781
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	344055-344086	8	0.75
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	346029-346060	8	0.75
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	280291-280322	8	0.75
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	445365-445396	8	0.75
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	416212-416243	8	0.75
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NZ_CP027023	Streptomyces sp. WAC00288 plasmid p1, complete sequence	153524-153555	8	0.75
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	459959-459990	8	0.75
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	448309-448340	8	0.75
NZ_CP017184_1	1.5\|1503287\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503287-1503318	32	NZ_CP018472	Xanthomonas perforans strain LH3 plasmid pLH3.1, complete sequence	85825-85856	8	0.75
NZ_CP017184_1	1.5\|1503287\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503287-1503318	32	NZ_CP046704	Nostoc sp. ATCC 53789 plasmid pNsp_a, complete sequence	259967-259998	8	0.75
NZ_CP017184_1	1.5\|1503287\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503287-1503318	32	NZ_CP018726	Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.1, complete sequence	116578-116609	8	0.75
NZ_CP017184_1	1.5\|1503287\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503287-1503318	32	NZ_CP018732	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence	20320-20351	8	0.75
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	NC_013059	Salmonella phage c341, complete genome	23538-23569	8	0.75
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	FJ000341	Salmonella phage g341c, complete genome	23538-23569	8	0.75
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	EU570103	Salmonella phage epsilon34, complete genome	25654-25685	8	0.75
NZ_CP017184_1	1.15\|1503889\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503889-1503920	32	KR053200	Gordonia phage GTE6, complete genome	2280-2311	8	0.75
NZ_CP017184_2	2.1\|1520432\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1520432-1520463	32	KP836356	Marinitoga camini virus 2, complete genome	43787-43818	8	0.75
NZ_CP017184_2	2.8\|1520853\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1520853-1520884	32	MN693867	Marine virus AFVG_250M804, complete genome	30972-31003	8	0.75
NZ_CP017184_2	2.9\|1520913\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1520913-1520944	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	884261-884292	8	0.75
NZ_CP017184_2	2.17\|1521393\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1521393-1521424	32	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	117157-117188	8	0.75
NZ_CP017184_2	2.17\|1521393\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1521393-1521424	32	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	56935-56966	8	0.75
NZ_CP017184_2	2.17\|1521393\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1521393-1521424	32	MG593803	Streptomyces phage Rowa, complete genome	18591-18622	8	0.75
NZ_CP017184_2	2.18\|1521453\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1521453-1521484	32	NZ_CP021803	Sinorhizobium meliloti strain USDA1021 plasmid accessoryA, complete sequence	259566-259597	8	0.75
NZ_CP017184_3	3.3\|1531213\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531213-1531244	32	MK448753	Streptococcus phage Javan407, complete genome	11498-11529	8	0.75
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	254727-254758	8	0.75
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	490419-490450	8	0.75
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	649325-649356	8	0.75
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NZ_CP041605	Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence	17957-17988	8	0.75
NZ_CP017184_3	3.9\|1531573\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531573-1531604	32	NZ_CP016746	Lactococcus lactis subsp. cremoris strain JM1 plasmid pMPJM1, complete sequence	93825-93856	8	0.75
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP051470	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence	16964-16995	8	0.75
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP030273	Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence	69733-69764	8	0.75
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	CP047033	Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence	63414-63445	8	0.75
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP015290	Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence	1335-1366	8	0.75
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP047039	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence	63387-63418	8	0.75
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP015213	Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence	107203-107234	8	0.75
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP053711	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence	148240-148271	8	0.75
NZ_CP017184_3	3.14\|1531873\|33\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531873-1531905	33	NZ_CP010024	Paraburkholderia fungorum strain ATCC BAA-463 plasmid pBIL, complete sequence	343238-343270	8	0.758
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	KU927496	Salmonella phage 101962B_sal5, complete genome	16235-16266	8	0.75
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	KU927491	Salmonella phage 146851_sal5, complete genome	17001-17032	8	0.75
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	KU927495	Salmonella phage 103203_sal4, complete genome	16498-16529	8	0.75
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	KU927498	Salmonella phage 64795_sal4, complete genome	35521-35552	8	0.75
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	KU927492	Salmonella phage 146851_sal4, complete genome	35531-35562	8	0.75
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NC_030919	Salmonella phage 118970_sal4, complete genome	16527-16558	8	0.75
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NC_017985	Salmonella phage SPN9CC, complete genome	16232-16263	8	0.75
NZ_CP017184_3	3.15\|1531934\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1531934-1531965	32	NC_031946	Salmonella Phage 103203_sal5, complete genome	36411-36442	8	0.75
NZ_CP017184_1	1.2\|1503107\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503107-1503138	32	MH178096	Aeromonas phage AsXd-1, complete genome	19698-19729	9	0.719
NZ_CP017184_1	1.4\|1503227\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503227-1503258	32	LT960610	Bacillus phage SBSphiC genome assembly, complete genome: monopartite	7568-7599	9	0.719
NZ_CP017184_1	1.20\|1504189\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1504189-1504220	32	NC_025012	Bacillus cereus plasmid pBC-Tim DNA, complete sequence	5548-5579	9	0.719
NZ_CP017184_1	1.21\|1504249\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1504249-1504280	32	NZ_CP012899	Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence	47982-48013	9	0.719
NZ_CP017184_2	2.4\|1520612\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1520612-1520643	32	NZ_CP019631	Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence	101501-101532	9	0.719
NZ_CP017184_2	2.4\|1520612\|32\|NZ_CP017184\|CRISPRCasFinder,CRT	1520612-1520643	32	LR745207	uncultured phage genome assembly, chromosome: 1	32016-32047	9	0.719
NZ_CP017184_2	2.12\|1521093\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1521093-1521124	32	NC_010070	Burkholderia multivorans ATCC 17616 plasmid pBMUL01, complete sequence	5973-6004	9	0.719
NZ_CP017184_2	2.12\|1521093\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1521093-1521124	32	NZ_CP028965	Burkholderia sp. IDO3 plasmid p1, complete sequence	191612-191643	9	0.719
NZ_CP017184_2	2.12\|1521093\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1521093-1521124	32	NC_010802	Burkholderia multivorans ATCC 17616 plasmid pTGL1, complete sequence	107482-107513	9	0.719
NZ_CP017184_2	2.17\|1521393\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1521393-1521424	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	674995-675026	9	0.719
NZ_CP017184_3	3.3\|1531213\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531213-1531244	32	HE806280	Acinetobacter bacteriophage AP22, complete genome	34265-34296	9	0.719
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NC_011273	Mycobacterium phage Myrna, complete genome	118338-118369	9	0.719
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	25653-25684	9	0.719
NZ_CP017184_3	3.13\|1531813\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531813-1531844	32	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	438341-438372	9	0.719
NZ_CP017184_1	1.8\|1503468\|33\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503468-1503500	33	NZ_LN831789	Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE2	121129-121161	10	0.697
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2318340-2318371	10	0.688
NZ_CP017184_1	1.11\|1503649\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503649-1503680	32	KJ749827	Escherichia phage ECBP5, complete genome	5503-5534	10	0.688
NZ_CP017184_1	1.13\|1503769\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1503769-1503800	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	167219-167250	10	0.688
NZ_CP017184_1	1.17\|1504009\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1504009-1504040	32	MN379642	Chicken microvirus mg7_16, complete genome	1561-1592	10	0.688
NZ_CP017184_2	2.8\|1520853\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1520853-1520884	32	EU399241	Halomonas phage phiHAP-1, complete genome	8453-8484	10	0.688
NZ_CP017184_2	2.10\|1520973\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1520973-1521004	32	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	115952-115983	10	0.688
NZ_CP017184_2	2.10\|1520973\|32\|NZ_CP017184\|CRISPRCasFinder,CRT,PILER-CR	1520973-1521004	32	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	115952-115983	10	0.688
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1287897-1287928	10	0.688
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1292565-1292596	10	0.688
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	162895-162926	10	0.688
NZ_CP017184_3	3.6\|1531393\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531393-1531424	32	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	86250-86281	10	0.688
NZ_CP017184_3	3.11\|1531693\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531693-1531724	32	NZ_CP018916	Serratia marcescens strain UMH1 plasmid unnamed1, complete sequence	65103-65134	10	0.688
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP025015	Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence	331382-331413	10	0.688
NZ_CP017184_3	3.12\|1531753\|32\|NZ_CP017184\|PILER-CR,CRISPRCasFinder,CRT	1531753-1531784	32	NZ_CP044329	Methylocystis rosea strain BRCS1 plasmid unnamed1, complete sequence	98499-98530	10	0.688

1. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MT740315 (Escherichia phage JEP4, complete genome) position: , mismatch: 0, identity: 1.0

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagacatcaaaatcacacct	Protospacer
********************************

2. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MN855665 (Bacteriophage sp. isolate 358, complete genome) position: , mismatch: 1, identity: 0.969

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagttagacatcaaaatcacacct	Protospacer
***********.********************

3. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to MT261384 (Salmonella virus PAT1, complete genome) position: , mismatch: 2, identity: 0.938

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gacaagctgctgcgtgaatccggattcgatga	Protospacer
*****************.***** ********

4. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to MT580116 (Salmonella phage 65FD, complete genome) position: , mismatch: 2, identity: 0.938

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gacaagctgctgcgtgaatccggattcgatga	Protospacer
*****************.***** ********

5. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to MT580117 (Salmonella phage 66FD, complete genome) position: , mismatch: 2, identity: 0.938

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gacaagctgctgcgtgaatccggattcgatga	Protospacer
*****************.***** ********

6. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NC_004775 (Enterobacteria phage epsilon15, complete genome) position: , mismatch: 2, identity: 0.938

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gacaagctgctgcgtgaatccggtttcgatga	Protospacer
*****************.*****.********

7. spacer 3.7|1531453|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 2, identity: 0.938

atcgtggcgatcaggtgtgacacctcggaaga	CRISPR spacer
atcgtggcgatacggtgtgacacctcggaaga	Protospacer
***********  *******************

8. spacer 3.7|1531453|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 2, identity: 0.938

atcgtggcgatcaggtgtgacacctcggaaga	CRISPR spacer
atcgtggcgatacggtgtgacacctcggaaga	Protospacer
***********  *******************

9. spacer 3.7|1531453|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to MT261384 (Salmonella virus PAT1, complete genome) position: , mismatch: 2, identity: 0.938

atcgtggcgatcaggtgtgacacctcggaaga	CRISPR spacer
atcgtggcgatacggtgtgacacctcggaaga	Protospacer
***********  *******************

10. spacer 3.7|1531453|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 2, identity: 0.938

atcgtggcgatcaggtgtgacacctcggaaga	CRISPR spacer
atcgtggcgatacggtgtgacacctcggaaga	Protospacer
***********  *******************

11. spacer 3.7|1531453|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to MT580116 (Salmonella phage 65FD, complete genome) position: , mismatch: 2, identity: 0.938

atcgtggcgatcaggtgtgacacctcggaaga	CRISPR spacer
atcgtggcgatacggtgtgacacctcggaaga	Protospacer
***********  *******************

12. spacer 3.7|1531453|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 2, identity: 0.938

atcgtggcgatcaggtgtgacacctcggaaga	CRISPR spacer
atcgtggcgatacggtgtgacacctcggaaga	Protospacer
***********  *******************

13. spacer 3.7|1531453|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to MT580117 (Salmonella phage 66FD, complete genome) position: , mismatch: 2, identity: 0.938

atcgtggcgatcaggtgtgacacctcggaaga	CRISPR spacer
atcgtggcgatacggtgtgacacctcggaaga	Protospacer
***********  *******************

14. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagttagacatcaaaataacacca	Protospacer
***********.************* *****

15. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KY709687 (Salmonella phage 29485, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

16. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KU927496 (Salmonella phage 101962B_sal5, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

17. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

18. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KU927491 (Salmonella phage 146851_sal5, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

19. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

20. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KU927498 (Salmonella phage 64795_sal4, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

21. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

22. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

23. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KU927492 (Salmonella phage 146851_sal4, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

24. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_030919 (Salmonella phage 118970_sal4, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

25. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_028696 (Salmonella phage SEN22, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

26. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_017985 (Salmonella phage SPN9CC, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

27. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

28. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

29. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_031946 (Salmonella Phage 103203_sal5, complete genome) position: , mismatch: 3, identity: 0.906

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagaccttaaaatcacaccc	Protospacer
***************** *.***********.

30. spacer 3.7|1531453|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

atcgtggcgatcaggtgtgacacctcggaaga	CRISPR spacer
agcgtggcgatacggtgtgacacctcggaaga	Protospacer
* *********  *******************

31. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatatgc	Protospacer
**************** ************ *

32. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NC_011802 (Salmonella enterica bacteriophage SE1, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagt	Protospacer
**************** ***********.**

33. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to CP051272 (Salmonella phage SW-70, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagt	Protospacer
**************** ***********.**

34. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to CP051278 (Salmonella phage ST-87, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagt	Protospacer
**************** ***********.**

35. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to CP051288 (Salmonella phage ST-29, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagt	Protospacer
**************** ***********.**

36. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to CP051285 (Salmonella phage ST-32, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagt	Protospacer
**************** ***********.**

37. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972697 (Salmonella phage SF10, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

38. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972696 (Salmonella phage Si3 KFo-2019, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

39. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

40. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

41. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NC_014900 (Salmonella phage ST160, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagt	Protospacer
**************** ***********.**

42. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

43. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972695 (Salmonella phage SI5, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

44. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972688 (Salmonella phage SI8, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

45. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

46. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972689 (Salmonella phage SF6, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatgagc	Protospacer
**************** ***********.**

47. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 3, identity: 0.906

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagtgaaggagtgagtatatgt	Protospacer
**************** ************ *

48. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NC_002166 (Bacteriophage HK022, complete genome) position: , mismatch: 4, identity: 0.875

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggagtcaaagtgaaggagtgagtatatgc	Protospacer
******.********* ************ *

49. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to AF069308 (Escherichia virus HK022, complete genome) position: , mismatch: 4, identity: 0.875

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggagtcaaagtgaaggagtgagtatatgc	Protospacer
******.********* ************ *

50. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 5, identity: 0.844

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggattgaagtcatgagcaaaccct	Protospacer
*********** ** *************.* .

51. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 5, identity: 0.844

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggattgaagtcatgagcaaaccct	Protospacer
*********** ** *************.* .

52. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 5, identity: 0.844

ttcgcaaaggagtgcagtcatga----gcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgagactgaaaa----	Protospacer
***********************    * ***

53. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MN856003 (Bacteriophage sp. isolate 1, complete genome) position: , mismatch: 5, identity: 0.844

ttcgcaaaggagtgcagtcatgagcaaatcac-	CRISPR spacer
ttcgcaaaggagtgcagtcatgaa-aaaccgta	Protospacer
***********************. ***.*..

54. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_019717 (Enterobacteria phage HK225, complete genome) position: , mismatch: 5, identity: 0.844

ttcgcaaaggagtgcagtcatgagcaaatcac-	CRISPR spacer
ttcgcaaaggagtgcagtcatgaa-aaaccgta	Protospacer
***********************. ***.*..

55. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 5, identity: 0.844

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gctcagctgctgcgtgaggccggtttcgatga	Protospacer
* . ************** ****.********

56. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 5, identity: 0.844

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gccggaatcaaagtgaaggagtgagtatgaac	Protospacer
**.************* ***********.*.

57. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 5, identity: 0.844

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gccggaatcaaagtgaaggagtgagtatgaac	Protospacer
**.************* ***********.*.

58. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 5, identity: 0.844

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gccggaatcaaagtgaaggagtgagtatgaac	Protospacer
**.************* ***********.*.

59. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 5, identity: 0.844

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gccggaatcaaagtgaaggagtgagtatgaac	Protospacer
**.************* ***********.*.

60. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 5, identity: 0.844

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gccggaatcaaagtgaaggagtgagtatgaac	Protospacer
**.************* ***********.*.

61. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 5, identity: 0.844

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gccggaatcaaagtgaaggagtgagtatgaac	Protospacer
**.************* ***********.*.

62. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 5, identity: 0.844

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gccggaatcaaagtgaaggagtgagtatgaac	Protospacer
**.************* ***********.*.

63. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 5, identity: 0.844

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gccggaatcaaagtgaaggagtgagtatgaac	Protospacer
**.************* ***********.*.

64. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to AP013541 (Uncultured phage_MedDCM-OCT-S42-C7 DNA, complete genome, group G8, isolate: uvMED-CGR-C97-MedDCM-OCT-S42-C7) position: , mismatch: 6, identity: 0.812

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaatagctaaacatcaaaatgttaact	Protospacer
********.*****.**********  .* **

65. spacer 1.5|1503287|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029211 (Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence) position: , mismatch: 6, identity: 0.812

cgcacggtcacgcagccagcggatatcc-cata	CRISPR spacer
cgcacggtcgcgcagccagccgacgttcgcat-	Protospacer
*********.********** **..*.* ***

66. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024865 (Escherichia coli strain AR_0015 plasmid unitig_3_pilon, complete sequence) position: , mismatch: 6, identity: 0.812

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagttcagtcatgagcatccgaa	Protospacer
************* ************  . *

67. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MN187550 (Escherichia phage phiv142-3, complete genome) position: , mismatch: 6, identity: 0.812

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagttcagtcatgagcatccgaa	Protospacer
************* ************  . *

68. spacer 1.15|1503889|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030841 (Acidisarcina polymorpha strain SBC82 plasmid pACPOL1, complete sequence) position: , mismatch: 6, identity: 0.812

tcctgctccttcacctgctgggca--gtgatgtt	CRISPR spacer
gcctgctcctgcacctgcagggcaacgtgacg--	Protospacer
 ********* ******* *****  ****.*

69. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.812

-gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
tggccgg-tgctgcgtgaggccggcttcgagga	Protospacer
 *.* .* *********** ********** **

70. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.812

-gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
tggccgg-tgctgcgtgaggccggcttcgagga	Protospacer
 *.* .* *********** ********** **

71. spacer 3.10|1531633|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029540 (Aquitalea sp. USM4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

tgctgcgcaatggatgccgccgcc-tggttgcc	CRISPR spacer
ggctgcgcactcgatgccgccgccatcgctgc-	Protospacer
 ******** * ************ * *.***

72. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ccaagcgtctggcccagggcatccgtcaaggc	Protospacer
...*  **********************.**.

73. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_006462 (Thermus thermophilus HB8 plasmid pTT27, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ttgacgccctggcccagggcatccgggagaac	Protospacer
****** .*****************  **...

74. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_017588 (Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ttgacgccctggcccagggcatccgggagaac	Protospacer
****** .*****************  **...

75. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ttgacgccctggcccagggcatccgggagaac	Protospacer
****** .*****************  **...

76. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ttgacgccctggcccagggcatccgggagaac	Protospacer
****** .*****************  **...

77. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ttgacgccctggcccagggcatccgggagaac	Protospacer
****** .*****************  **...

78. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to CP000620 (Burkholderia vietnamiensis G4 plasmid pBVIE04, complete sequence) position: , mismatch: 7, identity: 0.781

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ttgacagtctggcccagcgcatcctggagtgc	Protospacer
*****.*********** ******   ** *.

79. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

80. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

81. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

82. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MG969415 (UNVERIFIED: Salmonella phage GE_vB_TR, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

83. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

84. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

85. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

86. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

87. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

88. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

89. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

90. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

91. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

92. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

93. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

94. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

95. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 7, identity: 0.781

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggagtgcagtcatgattacgggaa	Protospacer
*********************** .* .  *

96. spacer 1.15|1503889|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to AP013379 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C43) position: , mismatch: 7, identity: 0.781

tcctgctccttcacctgctgggcagtgatgtt	CRISPR spacer
tcctgctcctttacctgctgtgctaatatctt	Protospacer
***********.******** ** .  ** **

97. spacer 2.1|1520432|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NZ_CP013426 (Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence) position: , mismatch: 7, identity: 0.781

aaaaaattcaagaaagggaagggaaagacacc	CRISPR spacer
aaaaaattcaagaaaggtaagggcgatgcagg	Protospacer
***************** ***** .* .**

98. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

gtggcg-tcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
-aggcgttcgccgttggtgatcgcggcgcggtg	Protospacer
  **** ***.**** **************.

99. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016820 (Rhodococcus sp. p52 plasmid pDF02, complete sequence) position: , mismatch: 7, identity: 0.781

gtggcg-tcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
-aggcgttcgccgttggtgatcgcggcgcggtg	Protospacer
  **** ***.**** **************.

100. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023713 (Rhodococcus ruber strain YC-YT1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

gtggcg-tcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
-aggcgctcgccgttggtgatcgcggcgcggtg	Protospacer
  **** ***.**** **************.

101. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ccaagcgcctggcccagggcatccgccagggc	Protospacer
...*  *.*****************.*****.

102. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ccaagcgcctggcccagggcatccgccagggc	Protospacer
...*  *.*****************.*****.

103. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
cgaagcgtctggcccagggcatccgccaaggc	Protospacer
. .*  *******************.**.**.

104. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
cgaagcgtctggcccagggcatccgccaaggc	Protospacer
. .*  *******************.**.**.

105. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
tcgacgggctggcccaggtcatccgcatcggc	Protospacer
*.***** ********** ******.   **.

106. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027023 (Streptomyces sp. WAC00288 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
tggacggtctggccgagagcatccgcgagatc	Protospacer
* ************ **.*******. **. .

107. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
tcgacgggctggcccaggtcatccggatcggc	Protospacer
*.***** ********** ******    **.

108. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
tcgacgggctggcccaggtcatccggatcggc	Protospacer
*.***** ********** ******    **.

109. spacer 1.5|1503287|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018472 (Xanthomonas perforans strain LH3 plasmid pLH3.1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcacggtcacgcagccagcggatatcccata	CRISPR spacer
cgcacgctcacgcagcctgcggaccttctttg	Protospacer
****** ********** *****. *.*. *.

110. spacer 1.5|1503287|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046704 (Nostoc sp. ATCC 53789 plasmid pNsp_a, complete sequence) position: , mismatch: 8, identity: 0.75

cgcacggtcacgcagccagcggatatcccata	CRISPR spacer
cgcatggtcacgcagccatcggactaccggga	Protospacer
****.************* ****.  ** . *

111. spacer 1.5|1503287|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018726 (Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcacggtcacgcagccagcggatatcccata	CRISPR spacer
cgcacgctcacgcagcctgcggaccttctttg	Protospacer
****** ********** *****. *.*. *.

112. spacer 1.5|1503287|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018732 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcacggtcacgcagccagcggatatcccata	CRISPR spacer
cgcacgctcacgcagcctgcggaccttctttg	Protospacer
****** ********** *****. *.*. *.

113. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_013059 (Salmonella phage c341, complete genome) position: , mismatch: 8, identity: 0.75

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcacaaaggagtgcagtcatgattacgggaa	Protospacer
***.******************* .* .  *

114. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to FJ000341 (Salmonella phage g341c, complete genome) position: , mismatch: 8, identity: 0.75

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcacaaaggagtgcagtcatgattacgggaa	Protospacer
***.******************* .* .  *

115. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to EU570103 (Salmonella phage epsilon34, complete genome) position: , mismatch: 8, identity: 0.75

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcacaaaggagtgcagtcatgattacgggaa	Protospacer
***.******************* .* .  *

116. spacer 1.15|1503889|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KR053200 (Gordonia phage GTE6, complete genome) position: , mismatch: 8, identity: 0.75

tcctgctccttcacctgctgggcagtgatgtt	CRISPR spacer
gcgcccggcttgacctgctcggcagtgatgtt	Protospacer
 * . *  *** ******* ************

117. spacer 2.1|1520432|32|NZ_CP017184|CRISPRCasFinder,CRT matches to KP836356 (Marinitoga camini virus 2, complete genome) position: , mismatch: 8, identity: 0.75

aaaaaattcaagaaagggaagggaaagacacc	CRISPR spacer
aaaaaattcaaaaaagggaagcgaactttaaa	Protospacer
***********.********* ***   .*

118. spacer 2.8|1520853|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MN693867 (Marine virus AFVG_250M804, complete genome) position: , mismatch: 8, identity: 0.75

attgactgacgccacacgcacacctcccccca	CRISPR spacer
agggatagacgcaacacgcacaccttccccgg	Protospacer
*  **. ***** ************.**** .

119. spacer 2.9|1520913|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 8, identity: 0.75

cgctata----ttcatgatggttcgtacacaaacaa	CRISPR spacer
----acaagagttgatgatggtgcgtacacaaacat	Protospacer
    *.*    ** ******** ************

120. spacer 2.17|1521393|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 8, identity: 0.75

tacggcgggaattgacaccacgaccacgggga	CRISPR spacer
gacggcggcaattaacaccacgacttcgaata	Protospacer
 ******* ****.**********. **.. *

121. spacer 2.17|1521393|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 8, identity: 0.75

tacggcgggaattgacaccacgaccacgggga	CRISPR spacer
gacggcggcaattaacaccacgacttcgaata	Protospacer
 ******* ****.**********. **.. *

122. spacer 2.17|1521393|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MG593803 (Streptomyces phage Rowa, complete genome) position: , mismatch: 8, identity: 0.75

tacggcgggaattgacaccacgaccacgggga	CRISPR spacer
aaccaggggaattgccaccacaaccacggcgt	Protospacer
 ** . ******** ******.******* *

123. spacer 2.18|1521453|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021803 (Sinorhizobium meliloti strain USDA1021 plasmid accessoryA, complete sequence) position: , mismatch: 8, identity: 0.75

aacgacgggcgcggtcttgatacgacgctgct	CRISPR spacer
aacgactggcacggtcttgatacgtggcgaag	Protospacer
****** ***.*************  ** .

124. spacer 3.3|1531213|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 8, identity: 0.75

catctcacgagatatttttgaaaacgatggat	CRISPR spacer
aattaaaaaagatatttttgaaaaagatgaat	Protospacer
 **.  * .*************** ****.**

125. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gacacgcggctgcgtgagtccggccgtcgtca	Protospacer
**** ** ****************. . .* *

126. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gtgaagctgctgcgcgactccggcttcaccgt	Protospacer
*  ***********.** *********. .*

127. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gactggctgctgcgtgagtccgggaacattgc	Protospacer
*** .******************   *. **

128. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041605 (Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence) position: , mismatch: 8, identity: 0.75

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gagtggacgctgcgtgagtccggcctcggtgc	Protospacer
**  .* .****************.***.**

129. spacer 3.9|1531573|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016746 (Lactococcus lactis subsp. cremoris strain JM1 plasmid pMPJM1, complete sequence) position: , mismatch: 8, identity: 0.75

---tggacccggttttctgagaaaaaaatgacaaa	CRISPR spacer
acttagat---attttcggataaaaaaatgacaaa	Protospacer
   *.**.   .***** ** **************

130. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051470 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence) position: , mismatch: 8, identity: 0.75

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
gccgcgtcgtggttcgtgagcgcggcgatata	Protospacer
*. ******* ******** *******  *

131. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030273 (Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.75

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
gccgcgtcgtggttcgtgagcgcggcgatata	Protospacer
*. ******* ******** *******  *

132. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to CP047033 (Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence) position: , mismatch: 8, identity: 0.75

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
gccgcgtcgtggttcgtgagcgcggcgatata	Protospacer
*. ******* ******** *******  *

133. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015290 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence) position: , mismatch: 8, identity: 0.75

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
gccgcgtcgtggttcgtgagcgcggcgatata	Protospacer
*. ******* ******** *******  *

134. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047039 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence) position: , mismatch: 8, identity: 0.75

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
gccgcgtcgtggttcgtgagcgcggcgatata	Protospacer
*. ******* ******** *******  *

135. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015213 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence) position: , mismatch: 8, identity: 0.75

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
gccgcgtcgtggttcgtgagcgcggcgatata	Protospacer
*. ******* ******** *******  *

136. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053711 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
ctggcgtcgtggttcgtgatcccgaagctgag	Protospacer
 ********* ********** **. ** .*

137. spacer 3.14|1531873|33|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010024 (Paraburkholderia fungorum strain ATCC BAA-463 plasmid pBIL, complete sequence) position: , mismatch: 8, identity: 0.758

aacccggtcgcagtgtttaacgcactggtcgaa	CRISPR spacer
atgccggtcgcagtgcttaacgcattgattgcg	Protospacer
*  ************.********.**.*.* .

138. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to KU927496 (Salmonella phage 101962B_sal5, complete genome) position: , mismatch: 8, identity: 0.75

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagttaaggagtgatttatgtg	Protospacer
************** * ******* *   . *

139. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to KU927491 (Salmonella phage 146851_sal5, complete genome) position: , mismatch: 8, identity: 0.75

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagttaaggagtgatttatgtg	Protospacer
************** * ******* *   . *

140. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 8, identity: 0.75

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagttaaggagtgatttatgtg	Protospacer
************** * ******* *   . *

141. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to KU927498 (Salmonella phage 64795_sal4, complete genome) position: , mismatch: 8, identity: 0.75

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagttaaggagtgatttatgtg	Protospacer
************** * ******* *   . *

142. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to KU927492 (Salmonella phage 146851_sal4, complete genome) position: , mismatch: 8, identity: 0.75

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagttaaggagtgatttatgtg	Protospacer
************** * ******* *   . *

143. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NC_030919 (Salmonella phage 118970_sal4, complete genome) position: , mismatch: 8, identity: 0.75

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagttaaggagtgatttatgtg	Protospacer
************** * ******* *   . *

144. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NC_017985 (Salmonella phage SPN9CC, complete genome) position: , mismatch: 8, identity: 0.75

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagttaaggagtgatttatgtg	Protospacer
************** * ******* *   . *

145. spacer 3.15|1531934|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NC_031946 (Salmonella Phage 103203_sal5, complete genome) position: , mismatch: 8, identity: 0.75

gctggaatcaaagtgatggagtgagtataagg	CRISPR spacer
gctggaatcaaagttaaggagtgatttatgtg	Protospacer
************** * ******* *   . *

146. spacer 1.2|1503107|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MH178096 (Aeromonas phage AsXd-1, complete genome) position: , mismatch: 9, identity: 0.719

ttgacggtctggcccagggcatccgtcagggt	CRISPR spacer
ttgacggtctggcgcaggacatcgctgaaacc	Protospacer
************* ****.****  * *.. .

147. spacer 1.4|1503227|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to LT960610 (Bacillus phage SBSphiC genome assembly, complete genome: monopartite) position: , mismatch: 9, identity: 0.719

agcaacaacagctagacatcaaaatcacacct	CRISPR spacer
agcaacaacagctagacaaccaagaagtattt	Protospacer
****************** * **.  ..*..*

148. spacer 1.20|1504189|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_025012 (Bacillus cereus plasmid pBC-Tim DNA, complete sequence) position: , mismatch: 9, identity: 0.719

tgagagcgagaaaagcaagattgagagctacg	CRISPR spacer
aggctgagaaaaaagcaagattgagagatatc	Protospacer
 *.  * **.***************** **.

149. spacer 1.21|1504249|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NZ_CP012899 (Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence) position: , mismatch: 9, identity: 0.719

gcacttcagccggttaagcgtcggtggttagg	CRISPR spacer
ccgtatcatctggttaagcgtcggtggttttt	Protospacer
 *.. *** *.******************

150. spacer 2.4|1520612|32|NZ_CP017184|CRISPRCasFinder,CRT matches to NZ_CP019631 (Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

agtggcaagctggccgcagccatctctaaagc	CRISPR spacer
tggggcacgctggccggagccatctccgatct	Protospacer
 * **** ******** *********..*  .

151. spacer 2.4|1520612|32|NZ_CP017184|CRISPRCasFinder,CRT matches to LR745207 (uncultured phage genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

agtggcaagctggccgcagccatctctaaagc	CRISPR spacer
gcgggtggcctggccgcagccatcgccaaagc	Protospacer
.  **... *************** *.*****

152. spacer 2.12|1521093|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_010070 (Burkholderia multivorans ATCC 17616 plasmid pBMUL01, complete sequence) position: , mismatch: 9, identity: 0.719

ttatcgcaagtcttgtcgtcgtggcggtgatg	CRISPR spacer
tgtggatgagtcttggcgtcgtggcggtgctg	Protospacer
*    ...******* ************* **

153. spacer 2.12|1521093|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028965 (Burkholderia sp. IDO3 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ttatcgcaagtcttgtcgtcgtggcggtgatg	CRISPR spacer
tgtggatgagtcttggcgtcgtggcggtgctg	Protospacer
*    ...******* ************* **

154. spacer 2.12|1521093|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_010802 (Burkholderia multivorans ATCC 17616 plasmid pTGL1, complete sequence) position: , mismatch: 9, identity: 0.719

ttatcgcaagtcttgtcgtcgtggcggtgatg	CRISPR spacer
tgtggatgagtcttggcgtcgtggcggtgctg	Protospacer
*    ...******* ************* **

155. spacer 2.17|1521393|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tacggcgggaattgacaccacgaccacgggga	CRISPR spacer
ccgggcgggaattgaacccacgaccaagagag	Protospacer
.  ************  ********* *.*..

156. spacer 3.3|1531213|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to HE806280 (Acinetobacter bacteriophage AP22, complete genome) position: , mismatch: 9, identity: 0.719

catctcacgagatatttttgaaaacgatggat	CRISPR spacer
atacaagctagatatttttaaaaacaatggat	Protospacer
   *  .* **********.*****.******

157. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NC_011273 (Mycobacterium phage Myrna, complete genome) position: , mismatch: 9, identity: 0.719

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
aacgagctgctgcgtgagtcccgcaagggggt	Protospacer
.**.***************** **   *. *

158. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
acggcgttgtcgttcgtgatcccggcccactg	Protospacer
..*****.************* **** *.

159. spacer 3.13|1531813|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

tcgttattattctcacccgcccgggtaaagcc	CRISPR spacer
ccgatattcttctcacccgcccggatgtacgg	Protospacer
.** **** ***************.*. *

160. spacer 1.8|1503468|33|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN831789 (Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE2) position: , mismatch: 10, identity: 0.697

cgccgacgtcgccgtcgttctgacgatgatgga	CRISPR spacer
cgccgtcctcgccgtcgttctgaccgcgggatg	Protospacer
***** * **************** ..*. . .

161. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 10, identity: 0.688

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
gcggcaaaggagagcaggcatgagcagcgttc	Protospacer
 . ********* **** ********.  . *

162. spacer 1.11|1503649|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to KJ749827 (Escherichia phage ECBP5, complete genome) position: , mismatch: 10, identity: 0.688

ttcgcaaaggagtgcagtcatgagcaaatcac	CRISPR spacer
ttcgcaaaggggtgcagttatgaaacttgtat	Protospacer
**********.*******.****.     .*.

163. spacer 1.13|1503769|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 10, identity: 0.688

cagtttgcgaggggaaacgcctttgacctctg	CRISPR spacer
gctgcggcgaagggaaaagcctttgacctcca	Protospacer
    . ****.****** ************..

164. spacer 1.17|1504009|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to MN379642 (Chicken microvirus mg7_16, complete genome) position: , mismatch: 10, identity: 0.688

taagcccgtcccgtgtccgtttatgctccagt	CRISPR spacer
tgtgcccgtcccatgcccgtttatgcggtgcc	Protospacer
*. *********.**.**********  .. .

165. spacer 2.8|1520853|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to EU399241 (Halomonas phage phiHAP-1, complete genome) position: , mismatch: 10, identity: 0.688

attgactgacgccacacgcacacctcccccca	CRISPR spacer
gaagggggacgccactcgctcacctcccccgc	Protospacer
.  *.  ******** *** **********

166. spacer 2.10|1520973|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 10, identity: 0.688

tcggatgttctcgcgccagactcgctatgatt	CRISPR spacer
gaggatgatctcgcgccagacacgcgtgggcg	Protospacer
  ***** ************* ***   *..

167. spacer 2.10|1520973|32|NZ_CP017184|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 10, identity: 0.688

tcggatgttctcgcgccagactcgctatgatt	CRISPR spacer
gaggatgatctcgcgccagacacgcgtgggcg	Protospacer
  ***** ************* ***   *..

168. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 10, identity: 0.688

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
tgcgccacgctgcgtgaagccggcttcgatgg	Protospacer
 .*.   .*********. ************.

169. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 10, identity: 0.688

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
tgcgccacgctgcgtgaagccggcttcgatgg	Protospacer
 .*.   .*********. ************.

170. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 10, identity: 0.688

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gacatgctgctgcgcgagtccgggagccggat	Protospacer
**** *********.********   * . .

171. spacer 3.6|1531393|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 10, identity: 0.688

gacaagctgctgcgtgagtccggcttcgatga	CRISPR spacer
gacatgctgctgcgcgagtccgggagccggat	Protospacer
**** *********.********   * . .

172. spacer 3.11|1531693|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018916 (Serratia marcescens strain UMH1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcgcgaaaccagaccagcgcacgcgcgtggg	CRISPR spacer
ctgaccgcaccagaccagcgcccgagcgtggc	Protospacer
.  .* . ************* ** ******

173. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025015 (Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence) position: , mismatch: 10, identity: 0.688

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
caggcgacgtcgtccgtgatcgcggtaggtgc	Protospacer
  **** ******.***********.. * ..

174. spacer 3.12|1531753|32|NZ_CP017184|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044329 (Methylocystis rosea strain BRCS1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gtggcgtcgtcgttcgtgatcgcggcgcgaat	CRISPR spacer
ttggcgccgtcgttcgtgttcgcgctcgacgt	Protospacer
 *****.*********** ***** .  . .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2068211 : 2078288

Oenococcus_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069598216.1\|2068211_2069426_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	8.2e-47	29.4
WP_025911408.1\|2069440_2070460_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.6e-19	27.7
WP_069598217.1\|2070533_2071901_+	MHS family MFS transporter	NA	NA	NA	NA
WP_069598218.1\|2072122_2073586_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	7.8e-44	29.3
WP_014883679.1\|2073629_2073833_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	3.4e-14	58.2
WP_044596338.1\|2074120_2074552_+	universal stress protein	A0A1W6JNV4	Morganella_phage	1.4e-17	34.5
WP_008502405.1\|2074587_2075274_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_023292548.1\|2075365_2076112_-	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_045353886.1\|2076254_2078288_+	peptidyl-dipeptidase Dcp	A0A1V0SIU1	Klosneuvirus	1.1e-19	22.6

DBSCAN-SWA_2

2552319 : 2645109

111

Escherichia_phage(21.13%)

holin,portal,protease,head,capsid,tail,terminase,integrase,lysis,plate

attL 2614689:2614708|attR 2645189:2645208

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069598389.1\|2552319_2553366_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	2.8e-19	28.7
WP_008502811.1\|2553617_2554379_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	5.2e-07	23.0
WP_069598390.1\|2554375_2554966_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_008502809.1\|2555001_2555877_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_003856793.1\|2555973_2556594_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_032623059.1\|2556590_2557472_-	5'-3' exoribonuclease	NA	NA	NA	NA
WP_106993556.1\|2557611_2557656_+	trp operon leader peptide	NA	NA	NA	NA
WP_008502807.1\|2557752_2559315_+	anthranilate synthase component 1	NA	NA	NA	NA
WP_008502806.1\|2559314_2560910_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	2.9e-52	37.9
WP_008502805.1\|2560913_2562272_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	8.6e-37	41.0
WP_008502804.1\|2562282_2563476_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_045352391.1\|2563475_2564285_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_069598391.1\|2564763_2565435_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	5.8e-79	59.1
WP_069598393.1\|2566748_2567675_-	hypothetical protein	NA	NA	NA	NA
WP_069598394.1\|2567822_2569091_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.7e-231	92.9
WP_044857240.1\|2569093_2569513_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.9e-35	57.5
WP_157888832.1\|2569728_2570202_-\|tail	tail fiber assembly protein	Q37843	Escherichia_phage	1.8e-21	39.1
WP_069598396.1\|2570266_2571592_-	hypothetical protein	Q37842	Escherichia_phage	5.8e-38	31.0
WP_032663409.1\|2571594_2572146_-\|tail	phage tail protein I	V5YTN0	Pseudomonas_phage	5.4e-30	43.6
WP_069598397.1\|2572138_2573053_-\|plate	baseplate assembly protein	A0A193GYM8	Enterobacter_phage	5.2e-62	47.5
WP_069598398.1\|2573042_2573390_-\|plate	baseplate assembly protein	V5YTB2	Pseudomonas_phage	1.3e-21	50.4
WP_069598399.1\|2573428_2574547_-	late control protein D	R9TNM7	Vibrio_phage	4.1e-37	33.7
WP_069598400.1\|2574548_2574764_-\|tail	phage tail protein	R9TR63	Vibrio_phage	1.3e-11	48.6
WP_111967067.1\|2574738_2575128_-\|tail	phage tail protein	D4HTW5	Vibrio_phage	1.7e-14	33.9
WP_069598401.1\|2575205_2576879_-	hypothetical protein	NA	NA	NA	NA
WP_032663398.1\|2576993_2577281_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_032663397.1\|2577339_2577846_-\|tail	tail protein	NA	NA	NA	NA
WP_069598402.1\|2577842_2579312_-\|tail	phage tail protein	R9TMQ0	Vibrio_phage	2.6e-79	45.8
WP_069598403.1\|2579350_2579968_-\|plate	phage baseplate assembly protein V	F1BUP5	Erwinia_phage	2.2e-16	34.0
WP_047074781.1\|2579960_2580515_-	hypothetical protein	NA	NA	NA	NA
WP_032663392.1\|2580523_2581186_-	hypothetical protein	R9TR34	Vibrio_phage	1.1e-21	37.1
WP_032663389.1\|2581187_2581544_-	hypothetical protein	NA	NA	NA	NA
WP_069598404.1\|2581543_2581879_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	8.4e-10	41.8
WP_069598405.1\|2581949_2584010_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	9.8e-202	53.8
WP_069598406.1\|2583999_2585520_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	3.9e-155	55.8
WP_032663383.1\|2585528_2585744_-	hypothetical protein	NA	NA	NA	NA
WP_069598407.1\|2585743_2587864_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	1.5e-306	75.6
WP_069598408.1\|2587863_2588358_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	2.4e-53	67.7
WP_047074764.1\|2588770_2589268_+	hypothetical protein	NA	NA	NA	NA
WP_069598409.1\|2589680_2590199_-	hypothetical protein	K7PHH7	Enterobacteria_phage	2.9e-78	88.9
WP_069598410.1\|2590195_2590732_-	lysozyme	K7PM52	Enterobacteria_phage	6.5e-89	87.9
WP_069598411.1\|2590731_2591034_-	hypothetical protein	O64361	Escherichia_phage	3.1e-32	67.3
WP_071965094.1\|2591634_2591826_-	hypothetical protein	NA	NA	NA	NA
WP_069598412.1\|2592444_2593161_+	hypothetical protein	NA	NA	NA	NA
WP_069598413.1\|2593157_2593766_+	hypothetical protein	NA	NA	NA	NA
WP_069598414.1\|2594874_2595231_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	5.5e-52	83.2
WP_069598415.1\|2595223_2595592_-	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	9.4e-39	60.9
WP_069598416.1\|2595584_2595881_-	hypothetical protein	Q6V7S4	Burkholderia_virus	4.9e-22	58.1
WP_069598417.1\|2596025_2596244_-	hypothetical protein	NA	NA	NA	NA
WP_069598418.1\|2596874_2597891_-	SMEK domain-containing protein	NA	NA	NA	NA
WP_084833291.1\|2598004_2598136_-	DUF977 family protein	H6WRX9	Salmonella_phage	1.8e-05	65.0
WP_069598419.1\|2598336_2598993_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	7.9e-12	28.5
WP_069598420.1\|2599010_2599751_-	ATP-binding protein	S4TNF5	Salmonella_phage	6.0e-101	72.7
WP_084833292.1\|2599753_2600671_-	hypothetical protein	U5P0A0	Shigella_phage	8.3e-52	40.7
WP_069598421.1\|2600693_2601146_-	hypothetical protein	NA	NA	NA	NA
WP_044158265.1\|2601145_2601403_-	helix-turn-helix domain-containing protein	K7PHA1	Enterobacteria_phage	3.3e-06	34.3
WP_044158267.1\|2601497_2601893_+	hypothetical protein	NA	NA	NA	NA
WP_157888818.1\|2602156_2602393_+	hypothetical protein	NA	NA	NA	NA
WP_069598422.1\|2603010_2603283_+	hypothetical protein	H6WRX2	Salmonella_phage	9.1e-15	48.1
WP_069598423.1\|2603505_2605404_+	exodeoxyribonuclease VIII	S4TNL0	Salmonella_phage	8.1e-25	29.2
WP_069598424.1\|2605390_2605633_+	DUF4060 family protein	NA	NA	NA	NA
WP_069598426.1\|2605931_2607050_+\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	3.7e-78	45.0
WP_069598427.1\|2607215_2608427_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_069598428.1\|2608423_2608657_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_071530987.1\|2608783_2609122_+	hypothetical protein	NA	NA	NA	NA
WP_008502800.1\|2609168_2609801_-	outer membrane protein OmpW	NA	NA	NA	NA
WP_021240310.1\|2610083_2610488_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_023292236.1\|2610513_2611257_+	UPF0259 family protein	NA	NA	NA	NA
WP_008502797.1\|2611312_2611852_+	septation protein A	NA	NA	NA	NA
WP_008502796.1\|2611956_2612352_+	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA
WP_023617069.1\|2612390_2613113_-	TonB system transport protein TonB	NA	NA	NA	NA
WP_008502794.1\|2613333_2613630_+	YciI family protein	NA	NA	NA	NA
WP_069598429.1\|2613671_2614625_-	MarR family transcriptional regulator	NA	NA	NA	NA
2614689:2614708	attL	NA	NA	NA	NA
WP_069598430.1\|2614864_2616223_-	hypothetical protein	NA	NA	NA	NA
WP_071965096.1\|2616646_2616868_-	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	4.6e-25	72.9
WP_069598431.1\|2616944_2618114_-	phage late control D family protein	A0A218M4J7	Erwinia_phage	1.1e-170	81.3
WP_069598432.1\|2618110_2618575_-\|tail	phage tail protein	A0A218M4I2	Erwinia_phage	3.6e-59	70.8
WP_069598433.1\|2618587_2621032_-\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	5.8e-201	52.9
WP_069598434.1\|2621021_2621144_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	8.5e-13	89.7
WP_038421047.1\|2621176_2621485_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.4e-27	73.6
WP_045329379.1\|2621545_2622064_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	1.7e-78	82.0
WP_069598435.1\|2622076_2623270_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.4e-184	80.4
WP_069598436.1\|2623394_2623991_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	2.7e-91	84.3
WP_069598437.1\|2623990_2625013_-\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	7.9e-136	74.7
WP_069598438.1\|2625009_2625618_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	1.2e-112	97.0
WP_069598439.1\|2625610_2626519_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	4.1e-152	94.4
WP_069598440.1\|2626524_2626875_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	3.8e-37	69.0
WP_069598441.1\|2626871_2627513_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	1.0e-96	83.6
WP_069598442.1\|2627581_2628031_-	phage virion morphogenesis protein	O80313	Escherichia_phage	2.9e-50	71.4
WP_069598443.1\|2628023_2628491_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	2.3e-58	69.0
WP_072163335.1\|2628453_2628699_-\|holin	holin	S4TNY4	Salmonella_phage	1.0e-28	77.8
WP_069598444.1\|2628586_2629012_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	4.6e-45	69.3
WP_069598445.1\|2629008_2629518_-	lysozyme	A0A218M4K3	Erwinia_phage	1.1e-77	85.7
WP_001354073.1\|2629501_2629723_-	hypothetical protein	A0A218M4L5	Erwinia_phage	1.4e-26	75.3
WP_023333101.1\|2629713_2629917_-	hypothetical protein	A0A218M4L8	Erwinia_phage	1.5e-25	79.1
WP_048998837.1\|2629916_2630423_-\|head	head completion/stabilization protein	O80306	Escherichia_phage	4.9e-62	71.4
WP_069598446.1\|2630522_2631278_-\|terminase	terminase endonuclease subunit	Q6K1I5	Salmonella_virus	3.3e-78	67.3
WP_069598447.1\|2631281_2632376_-\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	2.7e-166	81.1
WP_069598448.1\|2632431_2633286_-\|capsid	GPO family capsid scaffolding protein	A0A218M4L9	Erwinia_phage	2.6e-116	74.3
WP_069598449.1\|2635213_2636239_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	3.5e-168	82.9
WP_069598450.1\|2636741_2638970_+	AAA family ATPase	NA	NA	NA	NA
WP_069598451.1\|2639202_2641494_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	74.1
WP_069598452.1\|2641495_2641759_-	DUF5405 family protein	U5N3W1	Enterobacteria_phage	1.8e-23	59.3
WP_063441873.1\|2641790_2642000_-	DUF2732 family protein	Q7Y4C2	Escherichia_virus	6.1e-11	60.7
WP_069598453.1\|2642066_2642567_-	replication protein B	M1SV55	Escherichia_phage	3.3e-71	75.9
WP_167352772.1\|2642563_2642734_-	hypothetical protein	Q7Y4C4	Escherichia_virus	1.5e-12	61.8
WP_000184654.1\|2642831_2643020_+	hypothetical protein	NA	NA	NA	NA
WP_000042568.1\|2643022_2643262_-	hypothetical protein	NA	NA	NA	NA
WP_001064688.1\|2643303_2643582_-	hypothetical protein	Q1JS60	Enterobacteria_phage	4.0e-42	85.6
WP_000106733.1\|2643702_2644002_+	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	1.3e-38	76.8
WP_000111939.1\|2644098_2645109_+\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	8.1e-149	76.4
2645189:2645208	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3004878 : 3011182

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048223992.1\|3004878_3005427_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	5.1e-49	55.9
WP_032663233.1\|3005442_3006333_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.7e-25	32.6
WP_048224508.1\|3006356_3007229_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.8e-112	67.4
WP_047649490.1\|3007242_3008331_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	6.3e-91	49.4
WP_048223999.1\|3008720_3009614_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	9.0e-43	42.2
WP_069598523.1\|3009790_3011182_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	8.3e-19	32.3

DBSCAN-SWA_4

3112303 : 3207716

103

Salmonella_phage(18.75%)

portal,head,protease,capsid,tail,terminase,integrase,lysis,plate

attL 3194028:3194043|attR 3213502:3213517

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008500916.1\|3112303_3112999_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_069598553.1\|3113128_3114013_+	cytidine deaminase	NA	NA	NA	NA
WP_008500918.1\|3114140_3114857_+	outer membrane permeability protein SanA	NA	NA	NA	NA
WP_069598554.1\|3114981_3116364_+	glutamine synthetase	NA	NA	NA	NA
WP_008500921.1\|3116413_3117424_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA
WP_008500922.1\|3117439_3118960_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	F2Y2R6	Organic_Lake_phycodnavirus	2.6e-10	33.0
WP_008500923.1\|3119039_3120038_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA
WP_008500924.1\|3120333_3121356_-	HTH-type transcriptional regulator GalS	NA	NA	NA	NA
WP_069598555.1\|3121511_3122669_-	DUF418 family protein	NA	NA	NA	NA
WP_008500927.1\|3122688_3123357_-	GTP cyclohydrolase I FolE	M1Q6X8	Cellulophaga_phage	6.9e-56	55.8
WP_055321900.1\|3123459_3124608_-	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA
WP_069598556.1\|3124746_3125574_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_069598557.1\|3125677_3127648_-	catecholate siderophore receptor CirA	A0A0P0I887	Acinetobacter_phage	1.6e-12	35.9
WP_008500931.1\|3127873_3129343_-	amino acid permease	NA	NA	NA	NA
WP_008500932.1\|3129501_3130368_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_069598558.1\|3130465_3131512_+	YeiH family protein	NA	NA	NA	NA
WP_023294038.1\|3131576_3132434_+	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	3.6e-25	33.2
WP_069598559.1\|3132479_3134165_-	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
WP_008500936.1\|3134181_3135120_-	1-phosphofructokinase	NA	NA	NA	NA
WP_039025028.1\|3135119_3136250_-	fused PTS fructose transporter subunit IIA/HPr protein	NA	NA	NA	NA
WP_069598560.1\|3136611_3137793_+	sugar efflux transporter SetB	NA	NA	NA	NA
WP_021241515.1\|3137789_3138044_-	hypothetical protein	NA	NA	NA	NA
WP_008500940.1\|3138208_3138781_+	elongation factor P-like protein YeiP	NA	NA	NA	NA
WP_069598561.1\|3138898_3140089_-	mannonate dehydratase	NA	NA	NA	NA
WP_069598562.1\|3140292_3141759_+	fructuronate reductase	E5EQS6	Micromonas_sp._RCC1109_virus	1.5e-39	30.0
WP_008500943.1\|3141881_3142868_+	GTP-binding protein	NA	NA	NA	NA
WP_023618663.1\|3142901_3143615_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_008500946.1\|3144030_3144600_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	A0A1V0DZX6	Clostridioides_phage	3.6e-13	38.9
WP_008500947.1\|3144727_3146284_+	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA
WP_008500948.1\|3146357_3148163_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_045372656.1\|3148172_3149267_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_069598563.1\|3149266_3150292_+	ABC transporter permease	NA	NA	NA	NA
WP_021241521.1\|3150293_3151883_+	microcin C ABC transporter ATP-binding protein YejF	G9BWD6	Planktothrix_phage	2.7e-18	33.2
WP_008500952.1\|3151886_3152231_-	hypothetical protein	NA	NA	NA	NA
WP_025913174.1\|3152510_3153707_-	Bcr/CflA family multidrug efflux MFS transporter	S4TR35	Salmonella_phage	1.7e-20	22.6
WP_008500954.1\|3153722_3154430_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA
WP_032663178.1\|3154711_3156472_+	DEAD/DEAH box helicase	M4Q3N1	Vibrio_phage	2.9e-101	42.2
WP_008500956.1\|3156597_3156882_+	50S ribosomal protein L25	NA	NA	NA	NA
WP_008500957.1\|3156932_3157940_-	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	2.9e-82	48.6
WP_008500958.1\|3158074_3158302_+	YejL family protein	NA	NA	NA	NA
WP_069598564.1\|3158321_3160082_+	DUF3413 domain-containing protein	NA	NA	NA	NA
WP_069598565.1\|3160336_3160657_-	hypothetical protein	K7PGV5	Enterobacterial_phage	1.8e-41	73.6
WP_023325685.1\|3160656_3160896_-	hypothetical protein	K7P7N3	Enterobacteria_phage	5.5e-40	97.4
WP_069598566.1\|3160995_3161235_+	DinI family protein	K7PKM2	Enterobacterial_phage	2.6e-34	93.7
WP_069598567.1\|3161298_3161661_+	GtrA family protein	B9UDL8	Salmonella_phage	1.5e-41	70.0
WP_069598568.1\|3161657_3162575_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	3.5e-159	90.8
WP_069598569.1\|3162579_3163059_+	hypothetical protein	NA	NA	NA	NA
WP_157888821.1\|3163033_3164269_+	hypothetical protein	NA	NA	NA	NA
WP_069598570.1\|3164403_3164808_-	hypothetical protein	U5P0S4	Shigella_phage	5.3e-11	41.2
WP_069598571.1\|3165812_3166406_-	YmfQ family protein	NA	NA	NA	NA
WP_069598572.1\|3166402_3167545_-\|plate	baseplate J/gp47 family protein	A0A0A8WEY6	Clostridium_phage	4.7e-12	34.8
WP_069598573.1\|3167546_3167984_-	hypothetical protein	B5TK74	Pseudomonas_phage	1.4e-12	45.8
WP_045888898.1\|3167980_3168565_-\|plate	phage baseplate assembly protein	A0A077KAY0	Edwardsiella_phage	1.7e-05	31.5
WP_063929853.1\|3168561_3169647_-\|tail	phage tail protein	M1PVV2	Vibrio_phage	5.8e-44	31.5
WP_069598963.1\|3169643_3171047_-	hypothetical protein	NA	NA	NA	NA
WP_157888822.1\|3171109_3171844_-	hypothetical protein	NA	NA	NA	NA
WP_069598574.1\|3171906_3173766_-	hypothetical protein	T1SBJ1	Salmonella_phage	2.2e-19	40.8
WP_000807719.1\|3173907_3174186_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_069598575.1\|3174187_3174559_-\|tail	phage tail protein	NA	NA	NA	NA
WP_069598576.1\|3174562_3176065_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	1.8e-99	41.4
WP_069598577.1\|3176061_3176259_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_069598578.1\|3176262_3176808_-	ATP-binding protein	NA	NA	NA	NA
WP_063417625.1\|3176804_3177164_-	hypothetical protein	NA	NA	NA	NA
WP_047744272.1\|3177168_3177579_-	hypothetical protein	NA	NA	NA	NA
WP_023157311.1\|3177550_3178600_-\|capsid	major capsid protein	V5Q8G6	Xylella_phage	3.6e-51	33.7
WP_069598579.1\|3178697_3179102_-\|head	head decoration protein	NA	NA	NA	NA
WP_069598580.1\|3179101_3179692_-	hypothetical protein	NA	NA	NA	NA
WP_069598581.1\|3179693_3180560_-	S49 family peptidase	A0A2D1GN02	Marinobacter_phage	6.2e-49	37.9
WP_001045359.1\|3180556_3182194_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	3.3e-91	35.2
WP_000483309.1\|3182193_3182457_-	hypothetical protein	NA	NA	NA	NA
WP_069598582.1\|3182465_3184589_-\|terminase	terminase	A0A2K9V3X4	Faecalibacterium_phage	2.3e-97	35.9
WP_069598583.1\|3184530_3185100_-	hypothetical protein	NA	NA	NA	NA
WP_069598584.1\|3185341_3185983_-	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	6.3e-06	32.1
WP_157888823.1\|3186064_3186364_-	hypothetical protein	NA	NA	NA	NA
WP_069598586.1\|3186483_3186684_-	hypothetical protein	K7PHC3	Enterobacterial_phage	2.5e-17	69.8
WP_069598587.1\|3186890_3187427_-	hypothetical protein	K7PHH7	Enterobacteria_phage	3.6e-79	89.5
WP_069598588.1\|3187423_3187960_-	lysozyme	K7PM52	Enterobacteria_phage	6.5e-89	86.9
WP_069598589.1\|3187962_3188217_-\|lysis	lysis protein	NA	NA	NA	NA
WP_069598590.1\|3188281_3189334_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	1.2e-174	81.7
WP_069598591.1\|3189666_3190359_-	antitermination protein	NA	NA	NA	NA
WP_069598592.1\|3190380_3191442_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.0e-109	55.1
WP_016247390.1\|3191438_3192131_-	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	5.3e-59	55.1
WP_069598593.1\|3192145_3194083_-	DNA methyltransferase	H9C171	Pectobacterium_phage	5.1e-200	53.7
3194028:3194043	attL	NA	NA	NA	NA
WP_084833309.1\|3194075_3195413_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.6e-115	50.1
WP_069598595.1\|3195418_3196282_-	GntR family transcriptional regulator	U5P0A0	Shigella_phage	8.1e-41	85.7
WP_069598596.1\|3196271_3196451_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	6.6e-14	69.2
WP_047352162.1\|3196623_3197172_-	hypothetical protein	A0A1C9II13	Salmonella_phage	2.2e-68	68.1
WP_032623260.1\|3197164_3197428_-	helix-turn-helix transcriptional regulator	A0A0P0ZCZ7	Stx2-converting_phage	1.3e-18	57.5
WP_069598597.1\|3197525_3198221_+	helix-turn-helix domain-containing protein	Q8HAA0	Salmonella_phage	7.9e-87	69.6
WP_057072056.1\|3198938_3199310_+	hypothetical protein	Q8HAA1	Salmonella_phage	3.8e-56	89.4
WP_069598598.1\|3199363_3200194_+	YfdQ family protein	A0A192Y6E5	Salmonella_phage	7.4e-116	76.8
WP_069598599.1\|3200329_3200869_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.7e-74	74.9
WP_069598600.1\|3201050_3201656_+	hypothetical protein	A0A1R3Y5S0	Salmonella_virus	2.2e-21	54.7
WP_069598601.1\|3201652_3202000_+	ead/Ea22-like family protein	NA	NA	NA	NA
WP_069598602.1\|3202001_3202367_+	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	3.5e-62	90.0
WP_069598604.1\|3202776_3203016_+	hypothetical protein	G8C7S3	Escherichia_phage	2.3e-14	59.4
WP_016240148.1\|3203015_3203192_+	hypothetical protein	NA	NA	NA	NA
WP_016240149.1\|3203194_3203767_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	2.1e-93	83.0
WP_069598964.1\|3203811_3204021_+	hypothetical protein	NA	NA	NA	NA
WP_069598605.1\|3204023_3205211_+\|integrase	tyrosine-type recombinase/integrase	A0A2D1GN00	Marinobacter_phage	1.9e-32	30.0
WP_069598606.1\|3205430_3206618_-	MFS transporter	NA	NA	NA	NA
WP_069598607.1\|3206742_3207003_-	DUF2534 family protein	NA	NA	NA	NA
WP_008500963.1\|3207212_3207716_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
3213502:3213517	attR	NA	NA	NA	NA

DBSCAN-SWA_5

4033935 : 4063378

Erwinia_phage(35.71%)

plate,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008503186.1\|4033935_4034949_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.3e-109	58.6
WP_001144069.1\|4035185_4035401_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_069598790.1\|4035515_4037261_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.4e-76	39.0
WP_008503184.1\|4037415_4039263_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	6.4e-35	32.6
WP_008503183.1\|4039360_4039867_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_110915166.1\|4040389_4040641_+	DUF2542 family protein	NA	NA	NA	NA
WP_069598791.1\|4040868_4041069_-	late control protein B	A0A2I8TV89	Erwinia_phage	1.3e-21	77.6
WP_069598792.1\|4041136_4042291_-	phage late control D family protein	A0A0M5M5V5	Salmonella_phage	3.9e-131	61.7
WP_045910024.1\|4042287_4042752_-\|tail	phage tail protein	O80317	Escherichia_phage	4.3e-57	67.9
WP_023616176.1\|4045016_4045136_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	9.7e-14	89.7
WP_045910026.1\|4045168_4045471_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	8.8e-27	67.8
WP_045910027.1\|4045527_4046046_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	2.2e-78	80.2
WP_069598793.1\|4046057_4047245_-\|tail	phage tail sheath protein	S4TRX2	Salmonella_phage	2.0e-186	82.5
WP_023616180.1\|4047633_4048071_-\|tail	tail fiber assembly protein	S5FXM8	Shigella_phage	3.2e-09	34.8
WP_069598794.1\|4048073_4049945_-	hypothetical protein	Q37842	Escherichia_phage	1.6e-89	80.4
WP_023616181.1\|4049956_4050487_-\|tail	phage tail protein I	Q37841	Escherichia_phage	1.7e-89	86.4
WP_069598795.1\|4050479_4051388_-\|plate	baseplate assembly protein	U5N3T9	Enterobacteria_phage	4.1e-128	79.1
WP_069598796.1\|4051393_4051744_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	2.4e-39	70.7
WP_069598797.1\|4051740_4052382_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	5.0e-88	76.5
WP_069598798.1\|4052494_4052962_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	2.0e-49	60.6
WP_069598799.1\|4053057_4053483_-	protein lysB	A0A218M4K2	Erwinia_phage	5.8e-32	58.1
WP_069598800.1\|4053479_4053989_-	lysozyme	A0A218M4K3	Erwinia_phage	3.9e-75	82.7
WP_023309247.1\|4053972_4054194_-	hypothetical protein	A0A218M4L5	Erwinia_phage	3.9e-24	73.6
WP_024906438.1\|4054184_4054388_-\|tail	tail protein X	U5N3E7	Enterobacteria_phage	1.2e-22	71.6
WP_024906437.1\|4054566_4055007_-	DinI-like family protein	A0A218M4I0	Erwinia_phage	1.4e-52	75.2
WP_069598801.1\|4055116_4057306_-	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	73.2
WP_048028939.1\|4057307_4057529_-	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	2.1e-25	75.0
WP_023616297.1\|4057528_4057756_-	DUF2732 family protein	A0A0M3UL87	Salmonella_phage	1.2e-12	60.0
WP_023616298.1\|4057824_4058163_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	7.8e-40	74.8
WP_069598802.1\|4058390_4058966_+	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.7e-66	61.7
WP_069598803.1\|4059247_4060417_+	DNA repair protein	NA	NA	NA	NA
WP_069598804.1\|4060417_4061182_-	siderophore-interacting protein	NA	NA	NA	NA
WP_008503175.1\|4061327_4061822_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_069598805.1\|4061818_4063378_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	9.9e-13	32.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP017185

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

59241 : 102700

Shigella_phage(23.53%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069599031.1\|59241_61251_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	9.1e-27	30.7
WP_069599032.1\|61323_61557_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_069599033.1\|61604_62144_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	9.2e-51	76.2
WP_162274161.1\|62172_62262_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_069599035.1\|62996_63503_-	antirestriction protein	A0A1I9S7Y0	Rhodococcus_phage	3.7e-09	29.5
WP_069599036.1\|63913_64330_-	DUF1380 family protein	NA	NA	NA	NA
WP_045420362.1\|64378_64603_-	hypothetical protein	NA	NA	NA	NA
WP_069599037.1\|64599_65283_-	DNA methylase	A0A2I7RE86	Vibrio_phage	4.3e-29	36.9
WP_069599038.1\|65634_66306_+	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	60.4
WP_069599039.1\|66485_66908_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.3e-31	53.0
WP_069599040.1\|66907_68182_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	7.3e-155	63.3
WP_069599041.1\|68263_69238_-	ParB/RepB/Spo0J family partition protein	A0A1B0V750	Salmonella_phage	2.7e-85	54.1
WP_069599042.1\|69237_70443_-	ParA family protein	A0A077SL49	Escherichia_phage	6.2e-164	69.6
WP_069599043.1\|70790_71423_+	recombinase family protein	NA	NA	NA	NA
WP_069599044.1\|71476_71677_+	hypothetical protein	NA	NA	NA	NA
WP_069599045.1\|71822_72764_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.1e-75	55.0
WP_122983598.1\|73610_74600_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	7.2e-102	59.6
WP_069599048.1\|77105_77978_-	protein RepA	J9Q7H0	Salmonella_phage	2.2e-62	46.6
WP_157888842.1\|78427_78694_+	hypothetical protein	NA	NA	NA	NA
WP_157888843.1\|78801_79428_+	hypothetical protein	NA	NA	NA	NA
WP_000537152.1\|79710_79995_+\|transposase	IS3 family transposase	U5P4I9	Shigella_phage	8.9e-13	44.8
WP_077946840.1\|79991_80846_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	8.0e-81	56.2
WP_069599050.1\|81349_81706_+	hypothetical protein	NA	NA	NA	NA
WP_069599051.1\|82112_82439_+	hypothetical protein	NA	NA	NA	NA
WP_069599100.1\|83447_83555_+	uridine kinase	NA	NA	NA	NA
WP_157888844.1\|83846_84044_+	hypothetical protein	NA	NA	NA	NA
WP_157888857.1\|84087_84387_+	phosphoribulokinase	NA	NA	NA	NA
WP_069599054.1\|86505_87123_+	hypothetical protein	NA	NA	NA	NA
WP_069599055.1\|87109_87964_+	EAL domain-containing protein	NA	NA	NA	NA
WP_146751463.1\|87953_88157_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_084833317.1\|89594_90449_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.0e-80	56.0
WP_000537152.1\|90445_90730_-\|transposase	IS3 family transposase	U5P4I9	Shigella_phage	8.9e-13	44.8
WP_157888845.1\|91601_100481_+	hypothetical protein	NA	NA	NA	NA
WP_069599058.1\|100772_101033_+	DUF2534 family protein	NA	NA	NA	NA
WP_157888846.1\|102310_102700_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	2.5e-58	87.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017184

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP017185

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection