CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017151	Limosilactobacillus fermentum strain NCC2970 chromosome, complete genome	3 crisprs	cas1,cas14j,cas2,csa3,DinG,cas3,WYL,DEDDh,cas9,csn2	1	13	13	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017151_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017151_1

36210-36392

Unclear

Consensus_repeat	Method
ATAGTTTTCGTCTCCTTCTGGCGGAGATCAGTTTATATC	CRISPRCasFinder

2 spacers

cas1,cas2

The CRISPR arrays of NZ_CP017151_1

>merge|NZ_CP017151|1|36210-36392|CRISPRCasFinder
TTTTACCACGTCCCCTTCTAACGGAGATTAGTTTATATCGATTGGTTTGCTGAAATTTACGAGCAAGCAACCGATAGTTTTCGTCTCCTTCTGGCGGAGATCAGTTTATATCAAATCCAATTTCGTGATCGCCTTAGGCAAGGAATAGTTTTCGTCTCCTTCTGGCGGAGATCAGTTTATATC

>NZ_CP017151|1|1|36210-36392|CRISPRCasFinder
TTTTACCACGTCCCCTTCTAACGGAGATTAGTTTATATC	GATTGGTTTGCTGAAATTTACGAGCAAGCAACCG
ATAGTTTTCGTCTCCTTCTGGCGGAGATCAGTTTATATC	AAATCCAATTTCGTGATCGCCTTAGGCAAGGA
ATAGTTTTCGTCTCCTTCTGGCGGAGATCAGTTTATATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017151.1\|WP_155762347.1\|37935_38841_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP017151.1\|WP_069775559.1\|27422_28052_-\|DUF4038-domain-containing-protein	unknown	unknown	gnl\|CDD\|379072
NZ_CP017151.1\|WP_004563102.1\|41087_41453_-\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|223317
NZ_CP017151.1\|WP_069775566.1\|35101_36010_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP017151.1\|WP_069775561.1\|30563_31271_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP017151.1\|WP_130125071.1\|38865_39816_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017151.1\|WP_069775557.1\|26024_26381_-\|DUF4256-domain-containing-protein	unknown	unknown	gnl\|CDD\|339073
NZ_CP017151.1\|WP_069775567.1\|36556_37024_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017151.1\|WP_069776248.1\|37384_37999_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP017151.1\|WP_003683563.1\|42043_42601_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP017151.1\|WP_069775569.1\|40758_41091_-\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|376809
NZ_CP017151.1\|WP_069775570.1\|42875_44591_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP017151.1\|WP_069775564.1\|33617_34286_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_CP017151.1\|WP_069775563.1\|32405_33605_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP017151.1\|WP_004563103.1\|41576_41969_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319916
NZ_CP017151.1\|WP_069775560.1\|29510_30461_-\|sugar-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225263
NZ_CP017151.1\|WP_012391635.1\|39740_40433_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP017151.1\|WP_069775565.1\|34794_35100_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09638_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|273699
NZ_CP017151.1\|WP_082229413.1\|28193_29411_-\|NADH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|240086
NZ_CP017151.1\|WP_069775562.1\|31285_32401_-\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|223291

Protein	Function_ID	Function_description	E-value
NZ_CP017151.1\|WP_155762347.1\|37935_38841_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.83085e-27
NZ_CP017151.1\|WP_069775559.1\|27422_28052_-\|DUF4038-domain-containing-protein	gnl\|CDD\|379072	pfam13204, DUF4038, Protein of unknown function (DUF4038). A family of putative cellulases.	9.54875e-45
NZ_CP017151.1\|WP_004563102.1\|41087_41453_-\|CrcB-family-protein	gnl\|CDD\|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	1.31859e-19
NZ_CP017151.1\|WP_069775566.1\|35101_36010_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.51647e-75
NZ_CP017151.1\|WP_069775561.1\|30563_31271_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	2.22747e-139
NZ_CP017151.1\|WP_130125071.1\|38865_39816_-\|IS3-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.01862e-23
NZ_CP017151.1\|WP_069775557.1\|26024_26381_-\|DUF4256-domain-containing-protein	gnl\|CDD\|339073	pfam14066, DUF4256, Protein of unknown function (DUF4256). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 190 amino acids in length.	7.51423e-51
NZ_CP017151.1\|WP_069776248.1\|37384_37999_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	0.000105481
NZ_CP017151.1\|WP_003683563.1\|42043_42601_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.77798e-08
NZ_CP017151.1\|WP_069775569.1\|40758_41091_-\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	5.77947e-25
NZ_CP017151.1\|WP_069775570.1\|42875_44591_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	3.38258e-100
NZ_CP017151.1\|WP_069775564.1\|33617_34286_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	1.03849e-120
NZ_CP017151.1\|WP_069775563.1\|32405_33605_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP017151.1\|WP_004563103.1\|41576_41969_+\|VOC-family-protein	gnl\|CDD\|319916	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins. Uncharacterized subfamily of VOC family contains human glyoxalase domain-containing protein 5 and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.8236e-31
NZ_CP017151.1\|WP_069775560.1\|29510_30461_-\|sugar-binding-transcriptional-regulator	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	2.34752e-94
NZ_CP017151.1\|WP_012391635.1\|39740_40433_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	0.00111747
NZ_CP017151.1\|WP_069775565.1\|34794_35100_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|273699	TIGR01573, cas2, CRISPR-associated endonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. CRISPR systems protect against invasive nucleic acid sequences, including phage. Cas2 proteins have been characterized as either endoribonuclease (for ssRNA) or endodeoxyribonuclease (for dsDNA), depending on the system to which the Cas2 belongs. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes usually are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead of by this model (TIGR01573).	1.26955e-18
NZ_CP017151.1\|WP_082229413.1\|28193_29411_-\|NADH-dependent-oxidoreductase	gnl\|CDD\|240086	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	1.60235e-131
NZ_CP017151.1\|WP_069775562.1\|31285_32401_-\|thymidine-phosphorylase	gnl\|CDD\|223291	COG0213, DeoA, Thymidine phosphorylase [Nucleotide transport and metabolism].	8.53972e-140

>NZ_CP017151.1|WP_069775566.1|35101_36010_-|type-II-CRISPR-associated-endonuclease-Cas1
MKNIVYVENECFVGVTKEGLKFSNIKTKEKKYLTFDDIGTLVFNNRKCYLSERVIEYCVLNHIGILFCDRSHSPLEMIETTYNQEHRYERLKKQLTLTSKVKKRIWRKIVIQKIENQARCLELNEANTDDVALVRSVSNTVVDGDEHNGEAVAAKNYFKVLFGQSFKRGRTKDIQNASLNYGYAIIRAEIRRLLVMKGFEPSFGIHHESTANPYNLADDVIETYRPFVDNYIAKNILLSEDNEFDAEERRLLVRILLEKCVINGQVMHLSDAIYLTVDTLTTCIENNSSGNLKLPSFIEGGI
>NZ_CP017151.1|WP_069775565.1|34794_35100_-|CRISPR-associated-endonuclease-Cas2
MILLLSFDLPRNTKDERKQAAKYRKRLVELGFMMKQFSLYEREVVSKQTKRRLIEILKSEIPDTGLITLYQLPNAVNDQQITILGDNAILKSVGKPRLIVI
>NZ_CP017151.1|WP_069775564.1|33617_34286_-|deoxyribose-phosphate-aldolase
MELTKAQLAKYMDHTMLKPEATKEVIDQTIAKALEYNTASVCVNPYWVKHVHEGLKDSSVNTCSVIGFPLGANATAIKVAETKQALADGADEIDMVINIGELKDDNDSFVQEDIQAVANACHEQGKLLKVIIEACLLTDDEKRRACRLTVAGGADFVKTSTGFSKWGAKVEDVKLMRETVGPDFKIKAAGGIHHKDEALAMIAAGANRLGVSASVQILSEFD
>NZ_CP017151.1|WP_069775563.1|32405_33605_-|phosphopentomutase
MAYKRIFAIVLDSVGAGQAPDAAQFGDQGADTLGHIGEFYQGKLALPNLGRLGLSNLHGAPIEGVPVAKPAIGAFGRMTEVSAGKDSMDGHWEMMGLPVTRPLSTFPKGFPASIITKLEEFSGRHVIVNRPYSGTEVIHDYGEQQMQTGDLIVYTSGDSVLQIAAHEEVIPVRELYRICEYARTLVNGPEYTVGRIIARPYVGPDKDHFTRTANRRDISLAPTGDTDLDALKDAGFDVIGIGKINDIFSGQGITRGFHNESNMDGMDHVDAVMQEDFTGFCFTNLVDFDAMYGHRRNPEGFGQALMDFDARLGTVLDNLRDDDLLMITADHGNDPCFKGTDHTRESVPLLVYSPSMNQPNLDLGVLPTYADMGATVLANFKVAPVGTGTSFLAQVTNEG
>NZ_CP017151.1|WP_069775562.1|31285_32401_-|thymidine-phosphorylase
MAMLDIIAHKRDGCTLSTTEIHEFITVVVNHTIPDYQTAALLMAIYLKRMTTQEQTTLTKEMMESGDQLDLSAIPGFKADLTEAAFINQVQKIGLAIVGATGTVAPADKEIYALRDVTATVGSIPLIASSIMSKKIASGTDALVIDVKTGAGAFMQTEADARKLAKALVSIGQQAGLQCMAVISDMNQPLGNKVGNTLEIEETLDALKGQGPADLMELVNTLGAQMLVLGHQAPDLVTARKRLEAALTSGRALAKFQEMIEAQGGDGRVVEDYSLMPHAKQSGVVTKLLADEIGQAAMVLRGGRQKADDALNYGVGIELLKKLGDPVKKGEALLIIHHDQTGLDAATALLDDAIELGETAGAPTLIHETIN
>NZ_CP017151.1|WP_069775561.1|30563_31271_-|purine-nucleoside-phosphorylase
MSTHINAQMGDYAETVLLPGDPLRAKYIAETFLDNVKQVNAVRNALGFTGEYHGHRISVQGSGMGIPSMSIYINELVKEFGVKTIIRVGSCGGMASEVHLRDVLLASGSSTDSAVVANTFGYGVHYAPLANFELLDSAYHVAKDLGVSVKVGDIFAADRFYNDELDMQKLADYGVLGTEMESAGLYLLGAKLHFKALSVLTVSDLIFGSEKTTAQERERTFNDMIKIALETAIKQ
>NZ_CP017151.1|WP_069775560.1|29510_30461_-|sugar-binding-transcriptional-regulator
MLEDERRRDAIRAAKLYYLDDHNQSWIAGELGVSRATVSRLLRYAREQGLVEIHIKDPLEDEVTLAEELRDRYHLAAVKIVATGQATGEEKGALVGQAAASYLETIVENGDTIGIGWGKTIHQVALALRPEPLIDVRVVQMKGAANNQEQPTYAYESIQAFATAFHTFPEYLPLPVIFDQATTKQLVESDRQIARVIELGNRAPIAVFTVGTVRDSALLFKLGYFTKEEQNFLQQHAVGDVFSRFIDRDGQIVSPTINDRTIGIQLDQLRQKKHSVLVATGLAKVPAVAAALTGGYANALVIDQDAAMELIRMGAR
>NZ_CP017151.1|WP_082229413.1|28193_29411_-|NADH-dependent-oxidoreductase
MKALTDQVQLRHGAVLQNRIVQSPMLTNSGDREYVTQDTLDYYGARSQSAAMVIVEYTSVSKNGGPSRSWADDRTQLAIFDDSFKPGMTKLATALKKDGHKAILQLVHSGREANYAPQMGRTAEVPSAMDFAWVNYPLHELTEEEVWGIVKDFGRATKRAIECGFDGVEIHGANHYLIQEFFSAYSNKRTDYWGGSLEKRMNFPLEVVKEVLRVVKKAAPADFIVGYRISPEEIHDTVGYTWHESTQLIRAITDQFDLDYIHLSMPQYNGKPADSDKTFAELFAPAIGDQAKEMIVGNLMTEEDMQDALKQTDLVALARATLMDPQISLKIAEGRGDEIIHEISPAQVKAAHLTPGLVSIFSDPKMEPHLPGRESIYSLHEGVELGEDVIKNGTGSSYNLEDFDD
>NZ_CP017151.1|WP_069775559.1|27422_28052_-|DUF4038-domain-containing-protein
MLTVKQQHLEKDGRPFFYLADTAWSALTNAELSDWEYYLTKRESQGFNVIQINLLRQWDASPVAAKREPFAVTYTEQGYVYDYQQLNEDYFARAEKMIQMVVDYGMVPALVLLWANYVPGTWMKELIHNNPMPFDQLHPYVEAVTRRFQKYHPLYLVSGDVNFPDDDPKTLGEITRYTPRSYGFYARPIPRLSLPSTSTAKAPTYRRAC
>NZ_CP017151.1|WP_069775557.1|26024_26381_-|DUF4256-domain-containing-protein
MATVFDTAPEASKIPHRKSLCYDEEARLKRKKNPPTGGVVTAAKKLGAHLLDEEDYLLLQSVGDFDLKCSCLLATPAGVRKLGGAVFGDKRFGRAFIYHNTADCYYASRGYRLKVEIN
>NZ_CP017151.1|WP_069775567.1|36556_37024_-|hypothetical-protein
MKKGIPNPLPLFRESLTPFTKVKFTITTTTARAHYLIENLEEMAKQFYERNYAPTFLSAFPSKYIQGNYKAPIYLGAGSGLWSKVDHQHVDIEGIRRQTPRKMKMKFNGALKLTKSRIVRYKTPKKDGSFERHVLIINNENLYEMGKCGFKIKEL
>NZ_CP017151.1|WP_069776248.1|37384_37999_+|helix-turn-helix-domain-containing-protein
MRTSSLNRWIKQFLTAGLAGLIRPEHNHRYTLQTKRSAVKAYLSGTLSGQVILNRYQIRSLFQLHQWIARYNSGQLSVAYATRKRARKVGRKVTFEEKRQITQWTIDHEYNYQAAAEKFNVSYQRVYSWVRKYQRTHDWESLQDNRGRHKGKIPTNEVERLRQEVRQLKAKAKEREVQIAFAKKLVEIHNREVERPDDIKRFRK
>NZ_CP017151.1|WP_155762347.1|37935_38841_+|IS3-family-transposase
MGRNTQSGGGTAGRYQAIQEMSQSGYKVSDLVKAAGVSRQAYYKWLTHEPTVHDIQDQEILKLVKQLEAQHKHCVGYDKMTRLIKQERLSYTVNKKRVMRIMKEHSIKADYRQPKRKRVQEQETYEAQNTLNRQFEQAAANQVWVTDTTETAYNIRKYKVRLHVVLDLYGQYPLGWIITPTETSTGAIKVFQMAKQKDGGLAPLIHTDRGAAYTSKAFNHYLASNNSQHSYSAPGTLADNAVMEHWWADFKSIWLAHSPQPQTFEDLEQLVTEGIDYFTHSFISGKRNDLTAAEWYCTLSR
>NZ_CP017151.1|WP_130125071.1|38865_39816_-|IS3-family-transposase
MRKKISRNTQSGGEETGRYQAVQELINETAGSVSELTKIAKVSRKSYYQWLKRQPTQREIENKAILEAIYQIEKRHQNCAGYKKVTAILNNENRKNQEIPEYTFSFDFRINIKRVRRIMRKHGIKADVRQKKRSRKKEQQQYQEDNLLERKFIQIAPNLVWVSDTTELTYGRNNKVRLHVVLDLYGRYVLSYHISPTETAEAAIEAFKRAAKQAGTFAPLIHTDRGAAYTSKDFNNYLTSNNSKHSLSAPGTPADNAVIEHYWGDFKYIWMTHHPHPQTLTELKDLVKQGVEYFNTVEISSKRNNLTAEDFRNEAV
>NZ_CP017151.1|WP_012391635.1|39740_40433_-|helix-turn-helix-domain-containing-protein
MNRLELLYGYQKTESGLKVYADMHHVNQNTMTRWIRQFLLHGLAGVRHRSLNHRYLLNTKIEAVKEYQAGFPGEKIIEKYDIRSLSQLKQWSIQYNNDELKTKSRKRVRKMGRKVSFEEKCKIVQWVLDHDNDYQGATIQFNVSYQRVYSWVHKYHEAADSWEALKDNRGHRKPQKALEEMTEKERLEAEIKRLKKINREMELEIAFAKKLVEIRNRGVKRPDDIKRFKN
>NZ_CP017151.1|WP_069775569.1|40758_41091_-|fluoride-efflux-transporter-CrcB
MIMIGVGAGLGAWLRWQLTQLWKKTRIDWPLATLVINLLGSFALGLLSQYLPAESGKFWTTGLLGGFTTFSTFNVELISLFDEGRKGAALLYITSSYLGGLLLAWLGMQL
>NZ_CP017151.1|WP_004563102.1|41087_41453_-|CrcB-family-protein
MKNGSAVLIGGFSGGILRAALGLVVVTPIATLLVNLVGAFLLSFWTYWGIERGAFPSWVNLGVGTGLIGAFTTFSTMSTVTVGLLSTNVVLGLAYLLVTAVAGLAMAGLGFWLAKKVGKAQ
>NZ_CP017151.1|WP_004563103.1|41576_41969_+|VOC-family-protein
MKMRRIDHVVLPVADLNVARRFYHEVFDMPVLDQQSTDDVVTLRCGHQLIRLEKVDRDSDLVATKLVPGAADLCLVAGDDMDAIVHHLRSYFVDLVAGPVAKNGAEGPMTSVYLRDPDQNLIEIAVYENK
>NZ_CP017151.1|WP_003683563.1|42043_42601_+|GNAT-family-N-acetyltransferase
MVVTMKQTAKATEATYMRKATLEDLDRIWEIVEDARALLKADGSEQWQNGYPTRLTFQQDIEFGNCYLMIAGDRIAGTVTLMPQGDTHYNYIVDGEWAMPGHPFATIHRIAIDSAYRGRHFANYIMSTMISVAYAQGIRNFRIATHDKNDRVHNLVQNFGFVKRGKVYTGPTPDDLRNVYELNLK
>NZ_CP017151.1|WP_069775570.1|42875_44591_+|AarF/ABC1/UbiB-kinase-family-protein
MMAKQEVSATKRLRQIVNVISKNHFLANFYHQTNPEVIVAALEELGPTFIKLGQLLSTRPDLVSPSYISALETLQDQVQEDDFDTVKTTIEESTGQTLAELFADFEKRPFASASIGQCHRAHLHDGTEVVVKVQHPAVRQLVEVDLALFTRAVRLLKYVPEGSVVDLPQVVEQLGQSLRSEIDFTIEAQATQRFYELNNGRGIFLAPKAFVDQSSSRVLVTQYMPGDSIKGLLADPPTLALPDGLSLTDVRKGVARSLVENFIQEVFYDRFFHADPHPGNLFFLPVPAGSTQTTTQFQKQFGDLTLTINNQTPLPPYRLVYLDFGMMGTLPASLAQGIAQVILAITTKDSYQISQAILRICNQTGPIDEQSFNHQLASFLRPYLNTGLKDYNFSQMIFEVTSLCRRNHLQVKPEVTMLLRAFGTLEGTVAKLDPSISLMDIARPFAKQYFKEHFNPKHFTEGQALKLLRAAGATTSIPIRMATFLEQLTNGEQRLNLHYQGQDRVLAKLEALLNRLLTVIVLAAIILASSILVVGGTTHPLIYKLGVSGYLLAIIILLGLVIANTWRRFHR

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Crispr_ID: NZ_CP017151_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017151_2

1678118-1678238

Orphan

Consensus_repeat	Method
TAGAGACTCTGATTTAGTATAATTAATGAAGTAAATTGGAGGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017151_2

>merge|NZ_CP017151|2|1678118-1678238|CRISPRCasFinder
TAGAGACTCTGATTTAGTATAATTAATGAAGTAAATTGGAGGATCTGGGCCTAGAATAAAAAGTGTACAAGTTAAATAGAGACTCTGATTTAGTATAATTAAGGAAGTAAATTGGAGGATC

>NZ_CP017151|2|2|1678118-1678238|CRISPRCasFinder
TAGAGACTCTGATTTAGTATAATTAATGAAGTAAATTGGAGGATC	TGGGCCTAGAATAAAAAGTGTACAAGTTAAA
TAGAGACTCTGATTTAGTATAATTAAGGAAGTAAATTGGAGGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017151.1\|WP_003685154.1\|1682446_1684303_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP017151.1\|WP_003685179.1\|1669683_1670856_+\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341467
NZ_CP017151.1\|WP_012391103.1\|1663586_1664924_-\|SLC45-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340871
NZ_CP017151.1\|WP_069776137.1\|1674969_1676298_-\|D-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|235096
NZ_CP017151.1\|WP_069776138.1\|1684414_1685575_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237653
NZ_CP017151.1\|WP_041807752.1\|1686742_1687309_+\|imidazole-glycerol-phosphate-synthase	unknown	unknown	gnl\|CDD\|234996
NZ_CP017151.1\|WP_021815960.1\|1674183_1674795_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NZ_CP017151.1\|WP_012391111.1\|1681821_1682409_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237631
NZ_CP017151.1\|WP_003685171.1\|1673817_1674171_-\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|377753
NZ_CP017151.1\|WP_041807747.1\|1680273_1680639_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017151.1\|WP_012391105.1\|1666784_1667771_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP017151.1\|WP_041807749.1\|1680764_1681811_+\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_CP017151.1\|WP_024271704.1\|1672509_1673472_+\|ketopantoate-reductase-family-protein	unknown	unknown	gnl\|CDD\|224805
NZ_CP017151.1\|WP_003681896.1\|1686556_1686724_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234996
NZ_CP017151.1\|WP_012391112.1\|1685980_1686529_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|237288
NZ_CP017151.1\|WP_012391108.1\|1678554_1679433_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP017151.1\|WP_003685166.1\|1676587_1677988_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP017151.1\|WP_021815959.1\|1669213_1669531_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017151.1\|WP_041807745.1\|1678243_1678531_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP017151.1\|WP_012391104.1\|1664932_1666627_-\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|200472

Protein	Function_ID	Function_description	E-value
NZ_CP017151.1\|WP_003685154.1\|1682446_1684303_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP017151.1\|WP_003685179.1\|1669683_1670856_+\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341467	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase. This family includes 1,3-propanediol (1,3-PD) dehydrogenase, a key enzyme in the microbial production of 1,3-PD that has been previously characterized as the product of dhaT gene in Klebsiella pneumoniae. 1,3-PD dehydrogenase is a member of the family III metal-dependent polyol dehydrogenases, which are shown to require a divalent metal ion for catalysis. However, some members of this family showed a dependence on Fe(2+) or Zn(2+) for activity.	0
NZ_CP017151.1\|WP_012391103.1\|1663586_1664924_-\|SLC45-family-MFS-transporter	gnl\|CDD\|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.19062e-111
NZ_CP017151.1\|WP_069776137.1\|1674969_1676298_-\|D-serine-ammonia-lyase	gnl\|CDD\|235096	PRK02991, PRK02991, D-serine dehydratase; Provisional.	0
NZ_CP017151.1\|WP_041807752.1\|1686742_1687309_+\|imidazole-glycerol-phosphate-synthase	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	8.21972e-70
NZ_CP017151.1\|WP_021815960.1\|1674183_1674795_-\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	3.27973e-18
NZ_CP017151.1\|WP_012391111.1\|1681821_1682409_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237631	PRK14162, PRK14162, heat shock protein GrpE; Provisional.	1.68067e-53
NZ_CP017151.1\|WP_003685171.1\|1673817_1674171_-\|DUF1304-domain-containing-protein	gnl\|CDD\|377753	pfam06993, DUF1304, Protein of unknown function (DUF1304). This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.	5.69901e-24
NZ_CP017151.1\|WP_012391105.1\|1666784_1667771_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.8009e-101
NZ_CP017151.1\|WP_041807749.1\|1680764_1681811_+\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	1.95617e-130
NZ_CP017151.1\|WP_024271704.1\|1672509_1673472_+\|ketopantoate-reductase-family-protein	gnl\|CDD\|224805	COG1893, ApbA, Ketopantoate reductase [Coenzyme metabolism].	3.76656e-60
NZ_CP017151.1\|WP_003681896.1\|1686556_1686724_+\|hypothetical-protein	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	2.02348e-15
NZ_CP017151.1\|WP_012391112.1\|1685980_1686529_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|237288	PRK13141, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	5.31786e-66
NZ_CP017151.1\|WP_012391108.1\|1678554_1679433_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.30906e-60
NZ_CP017151.1\|WP_003685166.1\|1676587_1677988_-\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	5.69671e-158
NZ_CP017151.1\|WP_069776138.1\|1684414_1685575_+\|molecular-chaperone-DnaJ	gnl\|CDD\|237653	PRK14276, PRK14276, chaperone protein DnaJ; Provisional.	0
NZ_CP017151.1\|WP_041807745.1\|1678243_1678531_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.34208e-05
NZ_CP017151.1\|WP_012391104.1\|1664932_1666627_-\|alpha-glucosidase	gnl\|CDD\|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NZ_CP017151.1|WP_003685166.1|1676587_1677988_-|amino-acid-permease
MKSKVVENQDGTMRALSNRHVQMIAIGGTIGTGLFLGSGSTISKTGPSIMLVYLTLALFFFFMMRAIGEMFYSDPSQHTFVSFISRYLGPTVGHFTGWTYWIGLVFVCMAELTATASYVQYWFPTIPSWLVELVFLAVLTSVNLIAARLFGEAEFWFAMIKIIAIIAMIVTGIFMMTSHSITPLGHASLSNIFHDYTLFPHGIFNFVSAFPMVFFAFQGIEFVSITIGEAKSPHAVIKKAVNETLLRILLFYIGALIVIMGIIPWTSLSANSSPFVQVFKLAGFPAAAATINFVVLTSAASALNSCIFSAGRHFYQLATEVPKSSWMNKTFAKISKNGVPAAAIILSAALVLITPLMSLTTAISSVFTIVTGVSSDMYIIVYTLTMIAHRKYRASSDFLPNGFVMPWYKVTSPLTIFFFGVIFVSLFFIPEDIIGAIGAIVWTLVFGSIEYFRQKKTALANIDQYK
>NZ_CP017151.1|WP_069776137.1|1674969_1676298_-|D-serine-ammonia-lyase
MTENIEQLLHKFPLLNNMRQYEAIDWINPEFGEKAEIPFTQAEVFDVAARFKRFAPYLATVFPETQKTNGQLISPLIKIDKMQSRLASLNDAEIPGNVYLKADSMLPISGSIKSRGGIYEVLKFAEHVATTETNLTYSDDYAILATPEYHKLFADYGIMVGSTGNLGLSIGMAAASFGFKTTVHMSVDARQWKKDMLRANGVTVVEHNDSVSVAIAQGREEAAKDPHTYFIDDEGSKDLFLGYSAVGIEIQKQFADDGIFPDADHPVFVYLPAGVGGSPSGVSFGLQIMMPEGIYPVFAEPTHVPSVTMGMMTHLYDKIAVTDLGIDGKTLADGLAVPRSSKIAGRVMRTLLYGAHTFSDDDIYRYLAMLADTQGIYVEPSAAAGFTAIVPTVNEFKNKAALKNATHVVWATGGKLVPDDEMQKYYDKGRELLDEPQQILAR
>NZ_CP017151.1|WP_021815960.1|1674183_1674795_-|alpha/beta-hydrolase
MFHQQGYNVLLPDARAHGQSQGKYIGYGWPERYDVRKWSKKLIAHNGQDSQIVIFGVSMGGATTMMTSGIHLPRQVKAFVEDFGYDSLNAELNYEAGNLYNIPRVIRAPLIGSLSLINRVKNGFYTHEASSTAMLARNHRPMLFIHGSKDTFVPTKMVYQNYAATKGPKKLWVVKGAKHAASYEKEPHEYPQHVARFLNQYVK
>NZ_CP017151.1|WP_003685171.1|1673817_1674171_-|DUF1304-domain-containing-protein
MLVIFVVMLVAIGHIGIMLIEMFASPEQQARAFDLPVEFTRQKEARISFANQGIYNGALGVMIIASYWLVRGVLLITVWQMLLVFIMVVALYGGFTATKKIWVIQLLPALIAFLLTL
>NZ_CP017151.1|WP_024271704.1|1672509_1673472_+|ketopantoate-reductase-family-protein
MTKYTVIGAGAMGLRYGVLIQERTGNPVDFIDTWEPSVNTIQEQKGTWVSRDHKDKHMVPINISFPEDYTGDPDVWIIFVKQMQLAEVLKRCAPLFKAHQYAFSAMNGMGHIDKISEYFPDDHIVGGTAMIATVLNGPGDVDFMGAPRTGVMHMCNKTEKTDAMTQQMFDDFKAAGLGPILTENFMGTLMSKVVFNAVVNTLCTMFEITMGQFIEYPGAKDMAEQLMNESFDACERAGIHLVETRQEEVESVDYVSRVANPYHYPSMYQDFSKGRNTEVDYINGYIAKIGREHDYICRTHEFLVHEVHMAEMMRKYKQAK
>NZ_CP017151.1|WP_003685179.1|1669683_1670856_+|iron-containing-alcohol-dehydrogenase
MNRQFDFLMPSVNFFGPGVIAKIGDRAKMLNMHKPLVVTQESLEKIENGPVVQTIESLKKAGVDYAIFTGVEPNPKIRNIKAGKKMYEEEKCDSIITVGGGSAHDCGKGIGIVLTNGDDITKLAGIETLDNPLPPLMAVNTTAGTGSELTRHAVITNEEDHLKFVVVSWRNIPLVSFNDPMLMLGVPKSVTAATGCDAFVQAIEPYVSVDHNPITDSQCKEAIQLIQEALPEAVANGQNVEARTKMVEAEMLAGMAFNNANLGYVHAMAHQLGGQYDAPHGVCCALLLTTVEEYNLIACPDRFAELARIMGYDTTGLTTMQAAEKSIDGMREMCKAVGIPSSIKAIGAKPEDFSLMAENALKDGNAFSNPRKGTKQDIIDLYQKAYDGIY
>NZ_CP017151.1|WP_021815959.1|1669213_1669531_+|hypothetical-protein
MDKAWNKETESEKICERIKRCFTNRWRTRYWVSVVYYEPEHGYNLFLNIQPRNAYSRSIPIARLADCDYSELLDIITDVRQTYHFTLNYLNFPDDQVRKMRRNFR
>NZ_CP017151.1|WP_012391105.1|1666784_1667771_+|LacI-family-DNA-binding-transcriptional-regulator
MATIKDIARLAKVTPSTVSRVLNHSGGYSEKTRRRVEKIADELHYQKNEAAVNLVAQTSNLIGVIVTNATTSFAAPIIDSIEDWAYQNGGRILLAHCGLNDSERLKTCLNLMAGRKVNGIISVSVQFDENNLKLLDQLQLPLISLGVKVSNQPMISIDNLKAATTGTNYLISRGYQRIALIAVDTSDPQTGRTRCAGYQKAMESAGLTPSIIPGDYSFAAGKQAAEFLLAKGELPEAIFAASDDAAAGVIYAAQEHGIKVPEQLAVLGFDNSSVASMIYPGITTIDQPFKQMGRLAIEHLTNQNVSSVELPYQIKERGSVAKYNSAQS
>NZ_CP017151.1|WP_012391104.1|1664932_1666627_-|alpha-glucosidase
MIYTPKWWWQNSVVYQVYPRSFQDSNHDGIGDLKGIISRLDYIKKLGADIIWLNPIYRSPNVDNGYDISDYRAIDPTFGSLTDFKELLTKAHELGLKIMMDLVVNHSSDENEWFKQSRQGKENPYRDYYIWRDPVDGHEPTNWGSYFSGSAWQYDETSGQYYLHLFAVKQPDLNWENEAVRHSVYDIMNWWADLGVDGFRMDVINLISKPAVYKDVPTAPGMQYGDVEPVVANGHRMHEFLQEMHQAVMAKHDLVTVGETPGATTDDAKKYANLEQTELNMVFEFEHVGLDGNDNPALGKWSDKKVSLPELRDNLVKWQTQLNGKAWNSLYWNNHDQPRVVSRFGNDDPKYRVVSAKMLATMLHCLQGTPYIYAGEELGMTNTTFNSLSDYRDLESINAYHQLVDEEHLVDGKTMSRYLAIHSRDNARTPMQWDDSKNAGFSDAEPWIAVNPNYSEINAKAALADPSSVFYHYQKLIQMRHDLPVMTEGKFALVNGNELDEQVFAYTRDDGETTLLVVANFTKETIKREYAAGQGKLLLSNYEDDMGETLRPYEAKVYEFSSKR
>NZ_CP017151.1|WP_012391103.1|1663586_1664924_-|SLC45-family-MFS-transporter
MENQKTTTGLPSLPISTLFAMTFGFFGVNMAFSLQSSQMGRIFQTIGADPTKLGFFFILPPLMGMIVQPLVGKYSDLTWNRFGRRMPYLLVGAPIAALVLILLPNAGSFGFGYGSLAALWFGAIAVLFMDLSSNVCMQPFKMIIGDMVNEDQKDFAWSWQQIFSNMGGILATLMPFIMTLLGVSNTAKKGSLPNSVIWTFYLGAAVLLLTSIFTLAKVHEYNPQDYAKYHGVDIAANQEKLSFATLLKNAPKAFWQISLVQMFCWFAFQYLWTYGTGAVAKNVWNVTDPSTAGYQAAGNWFGVLSAVQSISAVLWGMVLSKTKPNQRKTMYRLGLVLGGLGFMSVFFIHDKMLLILSFALIGIGWISMNSIPFALLTTALAGKHEGAYLGLFNCSICLPQIIASVASFAIFPLIGKSMPGMLLLAGIVFVSGALFVSRIQEQPNA
>NZ_CP017151.1|WP_041807745.1|1678243_1678531_+|transposase
MTKHSYDKEFKEQAAQYYLGNKDHMTMDEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
>NZ_CP017151.1|WP_012391108.1|1678554_1679433_+|IS3-family-transposase
MDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVVKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWNNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
>NZ_CP017151.1|WP_041807747.1|1680273_1680639_-|hypothetical-protein
MPADHRYIQPQSAKEAMELIQKLFNSYRNAPLTSELLNYHNNLVTRLNDDIMAAATTEGPKRVEQLTGMIELMQAWTRIRLSGRPFLGKMRHFKLEDGNQPKYKRRIHKINGTSNHRASRH
>NZ_CP017151.1|WP_041807749.1|1680764_1681811_+|heat-inducible-transcriptional-repressor-HrcA
MLTKRQKEVLQAIVRQYTTTGQPVGSKALVDHLAKKVSSATIRNEMAVLEHEGLVTKEHSSSGRVPSKLGYRYYVDHLLDPLSVTKNDLIVIQNSLGTEYQKIDEIVSHSADLLSNLTSYTAFTLKPEQKDARLSGFRLVPLGNQKVIAILVTDTGDVESQSFTLPRGIDTEAMEAVIRLINDQLTGLTLPEVVKRLVTDIPLQVTRHLHQPEGFLNIFDSVASRAAHERFFVGGRLNLLGFANQQNPAAVQELYALLDHGNNLQAILDPDDEHDISVRIGNEIADNQVLDDYSLITAKYQVDQYGEGIIAVLGPTRMPYARTIGLVDTFRRELAKRLLDHYRRYYDS
>NZ_CP017151.1|WP_012391111.1|1681821_1682409_+|nucleotide-exchange-factor-GrpE
MAKDEEKNSQASAAPNEGEVKAKQEQTSAKEPAAKAGETEKVADLQKQVEELTKQLDDQKDQNLRAQAEMQNMTKRFKKEQAQLLKYDGQDLAKGILPVLDNLKRALEIEVEDENGQQLKKGIQMVHDHLEKALADHDIKEVEALNQPFDPTTQQAVQTVAASGDQKPDTVVQVLQAGYVLHDRVLRPAMVIVAQ
>NZ_CP017151.1|WP_003685154.1|1682446_1684303_+|molecular-chaperone-DnaK
MASNKIIGIDLGTTNSAVAVMEGNEPKIITNPEGGRTTPSVVSFKNGEVQVGEVAKRQAITNPNTVKSIKSHMGEAGYTVDIEGKKYTPQEISAMILQYIKKYAEDYIGDTVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIINEPTASSLAYGLDKKDRDEKILVYDLGGGTFDVSILELGDGVFQVLSTNGDTHLGGDDFDQKIMDWLIDGFKQENGIDLSQDKMALQRLKDAAEKAKKDVSGVQEAQISLPFITSGDNGPLHLEKTLTRAQFNQLTNDLVERTKQPVLNALKDAELSFSDIDEVILNGGSTRIPAVQEMVKSLTGKEPNHSINPDEAVALGAAIQGGVLTGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGNFQLTDIPPAPRGVPQIKVTFDIDKNGIVNVSAEDQGTHKKQNITIKSNSGLSDEEIERMKKDAEANAEADKKKKEEADLRNETDQLLFQTDKTLEELKGKVSDDEIKKAQDAKDALQKAKDDNNLEDMKAKKDDLNKIVQDLTVKLYQQAQQENQANGGQPTGDQGDGKKDDDNTVDGDFEEVNPDDKK
>NZ_CP017151.1|WP_069776138.1|1684414_1685575_+|molecular-chaperone-DnaJ
MAEEDLYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQYDQFGTTGSQAGGFGGQGGFGGFGQSGFSQGGFGDFSDIFGDIFGGGRARRDPSAPQQGRDLQYTMTLDFMDAVFGKETSIKYNRSAECHTCHGSGAKPGKSAHTCSTCHGQGYVLRQRQTMMGMMQSQEVCPTCGGKGQVIDPADQCDTCHGTGVTEERHELKVKVPQGIDDGQQMRLQGQGEAGKNGGPYGDLYIVFRVTPSRDFKRDGNTIYVDQDISISQATLGDHVQAKTVHGDVDLKIPAGTQSETKFRLRGKGVPRVNGNGNGDEYVTVHVKTPKTLNKRQREAMLAFAAASGEDVKGVKAGFFDKLKDAFEDNK
>NZ_CP017151.1|WP_012391112.1|1685980_1686529_+|imidazole-glycerol-phosphate-synthase-subunit-HisH
MGAKTVLTNDAKQVVSSDGIILTGIGTYQSGMTNFMQRHLIGPIRRAVEQGVPLLGIGLDMELLFDYSTEGGLIPGLGLIKGRVTEIPSTPQLPVPIVGWNMNRLENPVSRFNQIDEEYTYFVHSYYVQTAPQNIVATAEYGVVIPTIVHRGNVVGMQFQAEKSGPMGLNLLNDFLEGVVAR
>NZ_CP017151.1|WP_003681896.1|1686556_1686724_+|hypothetical-protein
MLTRRILPCLNVIDGRVKKRLLGSERLLDVGDPVELAFKYQENGTDGLVFITDPK
>NZ_CP017151.1|WP_041807752.1|1686742_1687309_+|imidazole-glycerol-phosphate-synthase
MLDMVEAISQQVFMPMTVVCNVRTVAEVRNLLLAGADKVGISTRSIMAPDFIPKVAQVFGNQSIVAMLDYHVDPRTNRKIVCTPGNTELDAYEWALRVVELGVGELLVNSMDRDGTENGFDTAFYRDLTTTLTIPVVASGGAGSTADFEEVFVNSGVTGAMAASAFHLDQMTISEVKETLLEKGILVR

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Crispr_ID: NZ_CP017151_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017151_3

1748648-1750003

TypeII

Consensus_repeat	Method
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CRISPRCasFinder
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CRT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	PILER-CR

20 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP017151_3

>merge|NZ_CP017151|3|1748648-1750003|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACGTAAAGGAGGTGGAATATAATGAAATTATCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACTTACTTTGAGGTTACTTACTTTGGCGAAGAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACGGAACTCGCCCGTGCTAGGATCGGATCCATGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACTAACAAACAGTGAATAGCAAAGACGGGTAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACTGATATGCTAGTTATGGAGAATTAAAATCCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACAGACCGTGTTTGGTAAGTCATCGAGTTGTTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACACGCTGATAAGCACACGTCTGCAGAAGACGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACAAGCTTGTATCTATGACTATCTAGCCAATCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACAGCCGTTGTTAAGGCCAGCCAATAAATCGCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACGTCTGATATGGCGGGCTGACCGTTGCCCCCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACTGAGAGCAACGACCATTACATAAAAGGTTGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACTGAGAGCAACGACCATTACATAAAAGGTTGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACCGAACCCGAAGTGACTGGTACCGACCCGAAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACTAGTCGCCCTGTTTTAAAGGGGGTTCACTAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACCGACTGATCGAAAACAAACATTAGATTATAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACCACGATCCCGAAGACGACGTAATCAATACGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACCCGTTGCGATGATTAAGACAACAAGTGCAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACGACGATTGATCTAGCACATGCAAGCTATCAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACCCATGAAAATGGGCCGACTGGTTATGCTGCTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACTATGTACAACGGTAAGCCAATCAATAATCAGTCTTGGATGAGTGTCAGATCAGTAGTCTTAGAATT

>NZ_CP017151|3|1|1748648-1749211|PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GTAAAGGAGGTGGAATATAATGAAATTATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TTACTTTGAGGTTACTTACTTTGGCGAAGA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GGAACTCGCCCGTGCTAGGATCGGATCCAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAACAAACAGTGAATAGCAAAGACGGGTAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGATATGCTAGTTATGGAGAATTAAAATCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AGACCGTGTTTGGTAAGTCATCGAGTTGTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	ACGCTGATAAGCACACGTCTGCAGAAGACG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AAGCTTGTATCTATGACTATCTAGCCAATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACAGCCGTTGTTAAGGCCAGCCAATAAATCGCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GTCTGATATGGCGGGCTGACCGTTGCCCCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGAGAGCAACGACCATTACATAAAAGGTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGAGAGCAACGACCATTACATAAAAGGTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CGAACCCGAAGTGACTGGTACCGACCCGAA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAGTCGCCCTGTTTTAAAGGGGGTTCACTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CGACTGATCGAAAACAAACATTAGATTATA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CACGATCCCGAAGACGACGTAATCAATAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CCGTTGCGATGATTAAGACAACAAGTGCAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GACGATTGATCTAGCACATGCAAGCTATCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CCATGAAAATGGGCCGACTGGTTATGCTGCT


>NZ_CP017151|3|3|1748648-1750003|CRISPRCasFinder
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GTAAAGGAGGTGGAATATAATGAAATTATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TTACTTTGAGGTTACTTACTTTGGCGAAGA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GGAACTCGCCCGTGCTAGGATCGGATCCAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAACAAACAGTGAATAGCAAAGACGGGTAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGATATGCTAGTTATGGAGAATTAAAATCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AGACCGTGTTTGGTAAGTCATCGAGTTGTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	ACGCTGATAAGCACACGTCTGCAGAAGACG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AAGCTTGTATCTATGACTATCTAGCCAATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AGCCGTTGTTAAGGCCAGCCAATAAATCGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GTCTGATATGGCGGGCTGACCGTTGCCCCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGAGAGCAACGACCATTACATAAAAGGTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGAGAGCAACGACCATTACATAAAAGGTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CGAACCCGAAGTGACTGGTACCGACCCGAA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAGTCGCCCTGTTTTAAAGGGGGTTCACTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CGACTGATCGAAAACAAACATTAGATTATA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CACGATCCCGAAGACGACGTAATCAATAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CCGTTGCGATGATTAAGACAACAAGTGCAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GACGATTGATCTAGCACATGCAAGCTATCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CCATGAAAATGGGCCGACTGGTTATGCTGCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TATGTACAACGGTAAGCCAATCAATAATCA
GTCTTGGATGAGTGTCAGATCAGTAGTCTTAGAATT

>NZ_CP017151|3|1|1748648-1750003|CRT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GTAAAGGAGGTGGAATATAATGAAATTATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TTACTTTGAGGTTACTTACTTTGGCGAAGA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GGAACTCGCCCGTGCTAGGATCGGATCCAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAACAAACAGTGAATAGCAAAGACGGGTAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGATATGCTAGTTATGGAGAATTAAAATCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AGACCGTGTTTGGTAAGTCATCGAGTTGTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	ACGCTGATAAGCACACGTCTGCAGAAGACG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AAGCTTGTATCTATGACTATCTAGCCAATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AGCCGTTGTTAAGGCCAGCCAATAAATCGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GTCTGATATGGCGGGCTGACCGTTGCCCCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGAGAGCAACGACCATTACATAAAAGGTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGAGAGCAACGACCATTACATAAAAGGTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CGAACCCGAAGTGACTGGTACCGACCCGAA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAGTCGCCCTGTTTTAAAGGGGGTTCACTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CGACTGATCGAAAACAAACATTAGATTATA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CACGATCCCGAAGACGACGTAATCAATAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CCGTTGCGATGATTAAGACAACAAGTGCAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GACGATTGATCTAGCACATGCAAGCTATCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CCATGAAAATGGGCCGACTGGTTATGCTGCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TATGTACAACGGTAAGCCAATCAATAATCA
GTCTTGGATGAGTGTCAGATCAGTAGTCTTAGAATT

>NZ_CP017151|3|2|1749242-1749937|PILER-CR
	GTAAAGGAGGTGGAATATAATGAAATTATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TTACTTTGAGGTTACTTACTTTGGCGAAGA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GGAACTCGCCCGTGCTAGGATCGGATCCAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAACAAACAGTGAATAGCAAAGACGGGTAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGATATGCTAGTTATGGAGAATTAAAATCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AGACCGTGTTTGGTAAGTCATCGAGTTGTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	ACGCTGATAAGCACACGTCTGCAGAAGACG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	AAGCTTGTATCTATGACTATCTAGCCAATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACAGCCGTTGTTAAGGCCAGCCAATAAATCGCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GTCTGATATGGCGGGCTGACCGTTGCCCCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGAGAGCAACGACCATTACATAAAAGGTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TGAGAGCAACGACCATTACATAAAAGGTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CGAACCCGAAGTGACTGGTACCGACCCGAA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAGTCGCCCTGTTTTAAAGGGGGTTCACTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CGACTGATCGAAAACAAACATTAGATTATA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CACGATCCCGAAGACGACGTAATCAATAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CCGTTGCGATGATTAAGACAACAAGTGCAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	GACGATTGATCTAGCACATGCAAGCTATCA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	CCATGAAAATGGGCCGACTGGTTATGCTGCT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017151.1\|WP_003681789.1\|1756212_1756554_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017151.1\|WP_187331085.1\|1750271_1750703_+\|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|369561
NZ_CP017151.1\|WP_069776167.1\|1740197_1742165_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274774
NZ_CP017151.1\|WP_003681801.1\|1751235_1751466_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225215
NZ_CP017151.1\|WP_069776165.1\|1738167_1738965_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
NZ_CP017151.1\|WP_069776171.1\|1755403_1756153_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NZ_CP017151.1\|WP_082229465.1\|1742420_1746557_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_CP017151.1\|WP_021349505.1\|1747645_1747951_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP017151.1\|WP_012391154.1\|1752546_1753500_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NZ_CP017151.1\|WP_069776164.1\|1737361_1738003_-\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|234590
NZ_CP017151.1\|WP_069776166.1\|1738987_1739752_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
NZ_CP017151.1\|WP_069776163.1\|1736487_1737300_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|238574
NZ_CP017151.1\|WP_082229467.1\|1750718_1751111_+\|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|369561
NZ_CP017151.1\|WP_031274857.1\|1754092_1754386_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017151.1\|WP_069776172.1\|1756569_1758804_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP017151.1\|WP_003681823.1\|1736029_1736473_+\|phosphate-starvation-inducible-protein-PsiE	unknown	unknown	gnl\|CDD\|235075
NZ_CP017151.1\|WP_069776170.1\|1747947_1748619_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP017151.1\|WP_003681791.1\|1754441_1755404_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
NZ_CP017151.1\|WP_069776169.1\|1746762_1747668_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP017151.1\|WP_069776272.1\|1751795_1752362_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017151.1\|WP_187331085.1\|1750271_1750703_+\|alpha/beta-hydrolase-fold-domain-containing-protein	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	9.22444e-28
NZ_CP017151.1\|WP_069776167.1\|1740197_1742165_+\|hypothetical-protein	gnl\|CDD\|274774	TIGR03766, hypothetical_protein_lp_2141, conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 (XrtG) is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.	3.68784e-19
NZ_CP017151.1\|WP_003681801.1\|1751235_1751466_-\|hypothetical-protein	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	0.00418451
NZ_CP017151.1\|WP_069776165.1\|1738167_1738965_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	1.29929e-122
NZ_CP017151.1\|WP_069776171.1\|1755403_1756153_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	8.20945e-72
NZ_CP017151.1\|WP_082229465.1\|1742420_1746557_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	1.53326e-127
NZ_CP017151.1\|WP_021349505.1\|1747645_1747951_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.64447e-28
NZ_CP017151.1\|WP_012391154.1\|1752546_1753500_-\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	4.87227e-180
NZ_CP017151.1\|WP_069776164.1\|1737361_1738003_-\|thiamine-phosphate-synthase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	1.07964e-69
NZ_CP017151.1\|WP_069776166.1\|1738987_1739752_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	2.24967e-94
NZ_CP017151.1\|WP_069776163.1\|1736487_1737300_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	9.57323e-91
NZ_CP017151.1\|WP_082229467.1\|1750718_1751111_+\|alpha/beta-hydrolase-fold-domain-containing-protein	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	3.94145e-18
NZ_CP017151.1\|WP_069776172.1\|1756569_1758804_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP017151.1\|WP_003681823.1\|1736029_1736473_+\|phosphate-starvation-inducible-protein-PsiE	gnl\|CDD\|235075	PRK02833, PRK02833, phosphate-starvation-inducible protein PsiE; Provisional.	1.08242e-37
NZ_CP017151.1\|WP_069776170.1\|1747947_1748619_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	8.90163e-88
NZ_CP017151.1\|WP_003681791.1\|1754441_1755404_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	1.38905e-101
NZ_CP017151.1\|WP_069776169.1\|1746762_1747668_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.82832e-84

>NZ_CP017151.1|WP_069776170.1|1747947_1748619_+|type-II-A-CRISPR-associated-protein-Csn2
MKLQYHGHQPVELMPGKVVILQIENPSVNTELIQGLQGYNDCLRMIDDEYQELNLSKVMKWEGDLVLNPTKLDSYQTSLDKMIVKNLSIEKQDRMNDLAREIYSEMQDSLFEFDLPLEVRYDESLLRLYKYAKIKYLTQVIRQPYGIIETDLKLHLELKDCQVLGYCNVANYLLPEQIQEFATLVEKTELAVLLVEFSEKRETLQQLKQDIYRIDRDFVDWHE
>NZ_CP017151.1|WP_021349505.1|1747645_1747951_+|CRISPR-associated-endonuclease-Cas2
MRLMVMFDLPTDTSQQRKQYRQFRKKLLNEGFIMIQYSVYVRVCTTRSAAEFLERRLKDYLPDQGVIQSLMLTEKQYSDMHFLLGDEIEEVRNSSKRTIVL
>NZ_CP017151.1|WP_069776169.1|1746762_1747668_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSIIIGQHAKITHSAHMMVVQTKDGINEIPMDDIAKVLVETTQAMISSDFMSACLQRNIKVIFVDRKYQPIGETVGYQPVARDYELLERQFLWPLERREQLWTRIAHAKIESQIKVARLNGCPVQELESELEAIEVNDVSNREAVVARKYFPLLFGKDFSRRQENQYNAALDYGYAVLLAETNQSITENGYLMELGIHHQNRENRFNLGSDLMEPFRPVIDYWVTGQKFTEFNRQVRVGLVDALHMVIKYNGTEMLTQNAVRQYVRECLDYLSGERDEIEVKVEFKDEVPNHALNGHV
>NZ_CP017151.1|WP_082229465.1|1742420_1746557_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDYVKEYHIGLDIGTSSIGWAVTDSQFKLMRIKGKTAIGVRLFEEGKTAAERRTFRTTRRRLKRRKWRLHYLDEIFAPHLQEVDENFLRRLKQSNIHPEDPAKNQAFIGKLLFPDLLKKNERGYPTLIKMRDELPVEQRAHYPVTNIYKLREAMINEDRQFDLREVYLAVHHIVKYRGHFLNNASVDKFKVGRIDFDKSFNVLNEAYEELQNGEGSFTIEPSKVEKIGQLLLDTKMRKLDRQKAVAKLLEVKVADKEETKRNKQIATAMSKLVLGYKADFATVAMVNGNEWKIDLSSETSEDEIEKFREELSDAQNDILTEITSLFSQIMLNEIVPNGMSISESMMDRYWTHERQLAEVKEYLATQPASARKEFDQVYNKYIGQAPKEKGFDLEKGLKKILSKKENWKEIDELLKAGDFLPKQRISANGVIPHQMHQQELDRIIEKQAKYYPWLATENPATGERDRHQAKYELDQLVSFRIPYYVGPLVTPEVQKATSGAKFAWAKRKEDGEITPWNLWDKIDRAESAEAFIKRMTVKDTYLLNEDVLPANSLLYQKYNVLNELNNVRVNGRRLSVGIKQDIYTELFKKKKTVKASDVASLVMAKTRGVNKPSVEGLSDPKKFNSNLATYLDLKSIVGDKVDDNRYQMDLENIIEWRSVFEDGEIFADKLTEVEWLTDEQRSALVKKRYKGWGRLSKKLLTGIVDENGQRIIDLMWNTDQNFMQIVNQPVFKEQIDQLNQKAITNDGMTLRERVESVLDDAYTSPQNKKAIWQVVRVVEDIVKAVGNAPKSISIEFARNEGNKGEITRSRRTQLQKLFEDQAHELVKDTSLTEELEKVPDLSDRYYFYFTQGGKDMYTGDPINFDEISTKYDIDHILPQSFVKDDSLDNRVLTSRKENNKKSDQVPAKLYAAKMKPYWNQLLKQGLITQRKFENLTMDVDQTIKYRSLGFVKRQLVETRQVIKLTANILGSMYQEAGTDIIETRAGLTKQLREEFDLPKVREVNDYHHAVDAYLTTFAGQYLNRRYPKLRSFFVYGEYMKFKHGSDLKLRNFNFFHELMEGDKSQGKVVDQQTGELITTRDEVADYFDWVQDLKLMLVTKELKRSNGKLFDATIQNANYTKLNERKKVFVPLKKELDKTLYGSYSGIQSSYMTIVKKFDKKGSTYAVQRIPVMYSKLLELEKEQSKLNRLVQSIVTSDPQAPNNFEVLMPCVLSGQLVIDNGRKFTLTSYRYQCSTAQLFLPKKDLKYIQNNFKELKKTPDKQDKIFETIYDDILKQVDKYFSLYDINKFRSKLHDGKDKFLALENFGEKESKDKVITKILRGLHANAERTSLKEIGLSTPLGQFQSGEGGITLSDNTKIIYQSPTGLFERHVYLKDL
>NZ_CP017151.1|WP_069776167.1|1740197_1742165_+|hypothetical-protein
MGPVTGARRVSRGLAWILVACLVGGLVSNFTFSQNWVTSLILVPLTLLGWWGLPKLAPVIDRLTNRQVTLLVGVGMTVMVLLQMAVLKWLPVTVYHDPLRVLDQATRMAVGHTSWKITYFWRYPQNVPIAYLLSRWLKLTMEMGMGVNRGVHLLSMLMLDGMVLLGIDTAWRVSKKKHLVLGILAFGVLTPFAYTYYLQVFYTDLPVMFVLLYLLRTLVLWRRRNWWQKSLSGALLVLLAMLGQLTKANMIVIIPAMLLTALILWGRHRFKQSQLLVPMLLITLGVALSFPLSSTLDKAAHFTRQTDYEFPLTQWMAMGLNEKSNGVYNTKDAVANVKLKTKAARNAHNLQVIKQRLAKQNVGLIKLWLAKLMVLTNAGNIFHWYNGGMQEAPRSYLKAAPVFTGLVAISYQLATCLLFGFVIKRLLATKMTLASANGQVALLVILTALGYLAFHVLLWEVEERYGEVLVPLSWLLVTLLPAADDQPITPKQVGSVFALGTVAVLVGAMTNLGVNSSGQTVTVAAQRSQLSTQYGAKPVDLAPGKQISQVVKINGAASDVSVQIHAKSHVTVTLVELKTGDEYVFKRHADEYDYQGNVPAGTYQFVIKNQTAVDQDVDIAHVPYYRMAPYPMDDQGTVHWDTSLIYWFRDVRSAN
>NZ_CP017151.1|WP_069776166.1|1738987_1739752_-|hydroxyethylthiazole-kinase
MQNAIATIKGTNPIVLTVANNVTPADVANGLNALGASPMMSQTPEEADDMVNIAQAAAINLGTLNPHQRGEMEAVMEAAKKYHKPTVLDPVACGATMYRLRVVTELLHQYHFTVIRGNAGEIATLAGVEWQSHGIDAGEGNADLEKVARLAAKKLGSVIVLSGEVDIVTDGTRLARLPYGSPAFKTHVGTGDMLSSLIGAFLATNDDAFDAAVDAVTTFTLCGQAVEDQRPGNWYPGLLNNLDAVTDQQLAAWQ
>NZ_CP017151.1|WP_069776165.1|1738167_1738965_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MTNEFPQALTIAGSDSGGGAGMQADLKTIQMRHVFATTVVVAVTAQNTLGVQDALALPTEMIDAQLASLADDFKIRAAKTGMLADVPTVQAVVRNLKQYDFGPLTVDPVMIAKGGAKLLADEAITTVKEELLPLATLVTPNLPEAEALTGLKAERPADMVKIGQALQKLGPKNVLVKGGHLGGDQAASDFVLMEDGTSFWMTSPRIDTVRTHGTGDTISACITAELAKGVGLEQAIRTAKGYVEATIRDTIQVGHGHGPLNHWAL
>NZ_CP017151.1|WP_069776164.1|1737361_1738003_-|thiamine-phosphate-synthase
MLFKNGMLRCYLIGGSQDTHHDPDEFLTKVEAAMQAGITAFQYREKGTSTLSKAETLALGQQVRELATKYGVPLFVDDDLELAAAIKADGIHVGQKDQRIEEVLAAVSDQLMVGYSCNTAAQVAHANQLNVDYIGTGPVFPTISKDDAGSALGVDGLADFVEQSAHPVVAIGGISLDNVGATLTSGCAGLSMISMVLGADDVAGTVKKILELY
>NZ_CP017151.1|WP_069776163.1|1736487_1737300_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MTQYVQALTIAGHDSDGSAGMPADLHAFFIDGVYGQGLLTAAVSGNSYGITQQQIMPTSFIKEQFKVLADDFAIKAAKTGMLANDDVINAVADSYDEAKFGPLVVDPVIITKHGVMLLEQSAYELFRERIIPLATVITPNFYEAQKLTELELKDDDQVQEAAAKLHALGAKNVVIKGQHIEGQTTPVRDFVSLADGKTFWLEEEYVPTDRVNGTGDTFSAIIAAELAKGHSVEAGVRLAKKVVHEAIANEIEVGHQFGPINHWACQEAAN
>NZ_CP017151.1|WP_003681823.1|1736029_1736473_+|phosphate-starvation-inducible-protein-PsiE
MVIEVSSQEWFQKIAHLLELVALVAVGLLGLALIVQLGMELLAVVKLALAPVSDPGFYDFLNEVTSFFIIFEFIVMVIEALRNHGHISITMLMGLGLTALLRHLLAASNSNGIETMVEVVAIVLLTVGLAIYRRFVHDPDENFEKRI
>NZ_CP017151.1|WP_187331085.1|1750271_1750703_+|alpha/beta-hydrolase-fold-domain-containing-protein
MPINSRRVIKQDVWIERPDHSNLRLAIFRAKQVATKHPATGILWLHGGGYALETAENALVYAEQLVADGRSVMVAPEYTTSALAPYPAALDDCYLALTWLRDNATRFGVNPNQLVVGGDSAGEGLTAAVCLRARDQGDVKIDW
>NZ_CP017151.1|WP_082229467.1|1750718_1751111_+|alpha/beta-hydrolase-fold-domain-containing-protein
MLDDRLVLASAKNNNAPVWNSRVNQAAWDLYLGDLLLDKIPIYAAPGRATDLAGLPPAITYVGDLDPFLDETSLYAKRLERVGIPVACKVFDGCYHGFDQVAPHADVTKVAHDFLRTEFFKAQTKYWAEN
>NZ_CP017151.1|WP_003681801.1|1751235_1751466_-|hypothetical-protein
MKLKVQQVGDSLAFVIPKEFGIPDGQCYTVEQTADGTIIFRPIPPSLFKENGFQGNELRQKDVSLEDGVLDSEWSD
>NZ_CP017151.1|WP_069776272.1|1751795_1752362_+|hypothetical-protein
MTVYAMNLPGFLAGRSLLTPLTIYAGQTSDYKELALNIANFPKFLQLAFPTAVLDYYELLKRGLMVLTCLILLAGFWYLRRLDLTPQRFLVVATWSFWTCTMFLPSMHDRYSYFVMVMLALVALLDRRMIGVALVSIGISTVLYLRYLLNADAAIDLWPLAIIQIINYCGFTAGTFLHPQPEYLHSFR
>NZ_CP017151.1|WP_012391154.1|1752546_1753500_-|L-lactate-dehydrogenase
MSKTHQKVVLIGDGAVGSSYAFAMVQQGLAQEFAIIDLNKKRTEGDALDLEDATPFTAPKLVYGADYDTCKDADLVVITAGAPQKPGETRLDLVDKNLKIIKSVVEPVVKSGFQGIFLVAANPVDILTYAVQKFSGFPRNKVVGSGTSLDSARLRVGLSKLFNVSPVDVNANMMAEHGDTEFAAFSSATIGGLPLYDLAEAKGISKDDLYKLEDDVRNKAYAIINSKGATFYGVATALMRISRAILRDENAVLPVGAPMSGEYGLKDIYIGTPAVINANGIAEVLEVPLDEREAKAMADSAKTLEEIAKNGMAKIQG
>NZ_CP017151.1|WP_031274857.1|1754092_1754386_+|hypothetical-protein
MREHDLTYKKEYIRPMMSPEHVYVFRFGKHRLNNRVIIRYSHTWTGRVKINEIDVRMHHQHHPRIFKTEDDMLAYLAHHLEKREAKEATRVHTGEEE
>NZ_CP017151.1|WP_003681791.1|1754441_1755404_+|50S-ribosomal-protein-L11-methyltransferase
MNWTAIVVETSTEAVDAVSYILTDTGATGVKIDDAADYQKLKPGKYGPYGEIVDPSTLPHREEGAAVTGYYPPTTFVPEKIADIRQRVAKLADFGLNPAPARVAAEEIDNQDWATAWQKYYHPVRVTRELTIVPQWEEYTPATADEKLLVLDPGMAFGTGTHPTTQLMLQALTIALRGGESMIDVGTGSGVLSIAAKQLGAGEVWAYDIDDVAVKSAKKNLALNPIAKDVHTGVNSLLDGIHTQVDLVVANILAEIILPLVPQAFENLKPGGKFLTSGIINTKFETVKKAIEAQGFVVDETMRIKDWYGIIAHKPAPEEA
>NZ_CP017151.1|WP_069776171.1|1755403_1756153_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MQRYFVDQALPAHRRLNLPDDVSHHLITVMRAAAGTQVELVLADHHAYLATLLDPATAEVKVEQDLGGDSELPIEVTLACGLPKTKEKPELIVQKATELGAKRIIFFESARSVSHWNDQRQGKKVERLQKIANAAAEQSHRDQIPEVSYVKDLKSLLTVFSFDHRVVAWEESAKQGERAALATVFDQVTPGQSLLAIFGPEGGLTETEVETMTAAGVVACGLGPRILRTETAPLYLMAAVSYHFELAEH
>NZ_CP017151.1|WP_003681789.1|1756212_1756554_+|hypothetical-protein
MKSLKSLWQRADRRLWVLSILIGFVVTWLVNIVPFINKVERFAVFYLLLYGAFAIWTGFTLQNRRRCWQAFVFPVSFLLAAHLFGPKYSLYFAPAYLAVAYLAWSMVRANRNK
>NZ_CP017151.1|WP_069776172.1|1756569_1758804_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MSQTKELTHEDVKNMVAKYMNEEHVALVERAYHFAAVAHQGQVRKSGEPYIIHPIQVAGILAELKMDPETVCAGYMHDLVEDTGATLDDIKELFGPTIAMIVDGDTKISKIHYKSNKEQMAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIDYISAAIKVVKTAIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVVDSIKDCYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTVIGPEGRPLEIQIRTHQMHEVAEYGVAAHWAYKEGKTNGVDQASQDSKKLNVVKEILKLRSESNGTDEFMQGIQSDVFADKVYAFTPKGDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIIPLNYEIKNGDIVDILTSSSSAGPSRDWMDLVSTRRARNKIRQFFRTHDREENVIEGRRIMEQQLRDAGYEPAELMVSDKEEEIAGKLHYKTADDMYAALGFGDIAPIGLRNRFTEDIRKHKEEEKQNAAQKAILEGHKTLEQEPPTRQKVAKSSEGVVVEGVDNLLTRLSHCCSPVPGDAIVGYITKGRGVSVHRADCPNIKAAEKSGQRVVSVYWANPAGDKTNYNADIEVEGYNRNGLLNDIIRAINNNTRYLTSINGRIDHNKMATISATVGVRNFQHLQLIMDSLKNLPDVYVVKRVIH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP017151.1	485788-485818	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP017151.1	490000-490030	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP017151.1	1031982-1032012	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP017151.1	1607792-1607822	1.0

1. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to position: 485788-485818, mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

2. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to position: 490000-490030, mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

3. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to position: 1031982-1032012, mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

4. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to position: 1607792-1607822, mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP015861	Lactobacillus plantarum strain LZ227 plasmid LZ227p3, complete sequence	27431-27461	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP035135	Lactobacillus plantarum strain SRCM103311 plasmid unnamed4	44248-44278	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP019032	Lactobacillus fermentum strain SNUV175 plasmid pSNU175-3, complete sequence	23674-23704	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP029548	Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence	55094-55124	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP029548	Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence	1337-1367	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP029548	Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence	35705-35735	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP029548	Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence	52649-52679	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP032360	Lactobacillus plantarum strain ZFM55 plasmid unnamed1, complete sequence	27808-27838	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP018212	Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence	32959-32989	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP043940	Lactobacillus nenjiangensis strain SH-Y15 plasmid pHY011, complete sequence	23283-23313	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP032643	Lactobacillus plantarum strain ZFM9 plasmid unnamed1, complete sequence	44328-44358	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP018177	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence	43117-43147	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP018179	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-3, complete sequence	31547-31577	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP018182	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-2, complete sequence	30401-30431	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP028244	Lactobacillus plantarum strain SRCM101518 plasmid unnamed3, complete sequence	30463-30493	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP054261	Lactobacillus plantarum strain TCI507 plasmid unnamed2	15620-15650	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	MN830253	Lactobacillus phage JNU_P5, complete genome	32972-33002	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP032753	Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed2, complete sequence	20436-20466	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP011405	Lactobacillus salivarius str. Ren plasmid pR2, complete sequence	33388-33418	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	CP033373	Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence	237163-237193	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	CP033373	Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence	249367-249397	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP032745	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence	33308-33338	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP012651	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK03, complete sequence	21474-21504	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_LN898145	Lactobacillus oligofermentans DSM 15707 = LMG 22743 isolate LACOL plasmid II, complete sequence	42909-42939	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP045037	Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence	11362-11392	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP018181	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence	31820-31850	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP013152	Lactobacillus plantarum strain MF1298 plasmid pMF1298-4, complete sequence	35887-35917	0	1.0
NZ_CP017151_3	3.15\|1749608\|30\|NZ_CP017151\|CRISPRCasFinder,CRT,PILER-CR	1749608-1749637	30	GU323708	Lactobacillus phage phiPYB5, complete genome	14767-14796	0	1.0
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP054658	Lactobacillus reuteri strain AN417 plasmid pAN417A, complete sequence	20865-20895	1	0.968
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NC_021503	Lactobacillus reuteri I5007 plasmid pLRI01, complete sequence	21758-21788	1	0.968
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP040502	Lactobacillus paragasseri JV-V03 plasmid unnamed2, complete sequence	17007-17037	2	0.935
NZ_CP017151_3	3.2\|1748750\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748750-1748779	30	MN830252	Lactobacillus phage JNU_P1, complete genome	44380-44409	2	0.933
NZ_CP017151_3	3.10\|1749278\|30\|NZ_CP017151\|CRISPRCasFinder,CRT,PILER-CR	1749278-1749307	30	GU323708	Lactobacillus phage phiPYB5, complete genome	12783-12812	2	0.933
NZ_CP017151_3	3.13\|1749476\|30\|NZ_CP017151\|CRISPRCasFinder,CRT,PILER-CR	1749476-1749505	30	NC_029068	Lactobacillus phage LfeSau, complete genome	4928-4957	2	0.933
NZ_CP017151_2	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	NZ_CP045730	Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence	25375-25405	3	0.903
NZ_CP017151_3	3.4\|1748882\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748882-1748911	30	NC_029068	Lactobacillus phage LfeSau, complete genome	8459-8488	3	0.9
NZ_CP017151_3	3.5\|1748948\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748948-1748977	30	GU323708	Lactobacillus phage phiPYB5, complete genome	7185-7214	3	0.9
NZ_CP017151_3	3.11\|1749344\|30\|NZ_CP017151\|CRISPRCasFinder,CRT,PILER-CR	1749344-1749373	30	CP033375	Lactobacillus fermentum strain DR9 plasmid unnamed4, complete sequence	13919-13948	3	0.9
NZ_CP017151_3	3.11\|1749344\|30\|NZ_CP017151\|CRISPRCasFinder,CRT,PILER-CR	1749344-1749373	30	NZ_CP034100	Lactobacillus fermentum strain LMT2-75 plasmid p1, complete sequence	16531-16560	3	0.9
NZ_CP017151_3	3.12\|1749410\|30\|NZ_CP017151\|CRISPRCasFinder,CRT,PILER-CR	1749410-1749439	30	CP033375	Lactobacillus fermentum strain DR9 plasmid unnamed4, complete sequence	13919-13948	3	0.9
NZ_CP017151_3	3.12\|1749410\|30\|NZ_CP017151\|CRISPRCasFinder,CRT,PILER-CR	1749410-1749439	30	NZ_CP034100	Lactobacillus fermentum strain LMT2-75 plasmid p1, complete sequence	16531-16560	3	0.9
NZ_CP017151_3	3.14\|1749542\|30\|NZ_CP017151\|CRISPRCasFinder,CRT,PILER-CR	1749542-1749571	30	KP054477	Lactobacillus phage LfeInf, complete genome	104562-104591	3	0.9
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	AP014427	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S28-C14, * SEQUENCING IN PROGRESS *, 3 ordered pieces	37230-37259	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	AP014428	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S29-C101, * SEQUENCING IN PROGRESS *, 7 ordered pieces	7869-7898	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	AP013719	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22A-MedDCM-OCT-S33-C25, * SEQUENCING IN PROGRESS *	17416-17445	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NC_015980	Lactobacillus sanfranciscensis TMW 1.1304 plasmid pLS2, complete sequence	897-926	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	AP014435	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22C-MedDCM-OCT-S41-C155, * SEQUENCING IN PROGRESS *, 2 ordered pieces	11870-11899	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	AP013716	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S38-C22, * SEQUENCING IN PROGRESS *	21140-21169	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	AP013443	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C22C-MedDCM-OCT-S23-C7	20761-20790	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NC_029073	Geobacillus virus E3, complete genome	3294-3323	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	AP013721	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22A-MedDCM-OCT-S45-C35, * SEQUENCING IN PROGRESS *	19951-19980	6	0.8
NZ_CP017151_3	3.3\|1748816\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748816-1748845	30	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	32287-32316	6	0.8
NZ_CP017151_3	3.5\|1748948\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748948-1748977	30	MH243439	Escherichia phage vB_EcoM_NBG2, complete genome	37339-37368	6	0.8
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP054658	Lactobacillus reuteri strain AN417 plasmid pAN417A, complete sequence	17969-17998	7	0.767
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP009299	Bacillus cereus D17 plasmid unnamed, complete sequence	89571-89600	7	0.767
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP053930	Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence	87827-87856	7	0.767
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP033789	Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence	204963-204992	7	0.767
NZ_CP017151_3	3.20\|1749938\|30\|NZ_CP017151\|CRISPRCasFinder,CRT	1749938-1749967	30	MN693466	Marine virus AFVG_25M243, complete genome	13293-13322	7	0.767
NZ_CP017151_3	3.20\|1749938\|30\|NZ_CP017151\|CRISPRCasFinder,CRT	1749938-1749967	30	MN693525	Marine virus AFVG_25M131, complete genome	13071-13100	7	0.767
NZ_CP017151_3	3.20\|1749938\|30\|NZ_CP017151\|CRISPRCasFinder,CRT	1749938-1749967	30	MW057854	Providencia phage PSTCR2, complete genome	22921-22950	7	0.767
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	JN638751	Bacillus phage G, complete genome	65922-65951	8	0.733
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP007647	Lactobacillus salivarius strain JCM1046 plasmid pMP1046A, complete sequence	184594-184623	9	0.7
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP007647	Lactobacillus salivarius strain JCM1046 plasmid pMP1046A, complete sequence	84086-84115	9	0.7
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP020859	Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence	123481-123510	9	0.7
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP020859	Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence	243836-243865	9	0.7
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	94921-94950	9	0.7
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	196393-196422	9	0.7
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	64239-64268	9	0.7
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	NZ_LT604075	Lactobacillus salivarius isolate LPM01 plasmid II	217027-217056	9	0.7
NZ_CP017151_3	3.1\|1748684\|30\|NZ_CP017151\|PILER-CR,CRISPRCasFinder,CRT	1748684-1748713	30	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	64469-64498	9	0.7
NZ_CP017151_3	3.20\|1749938\|30\|NZ_CP017151\|CRISPRCasFinder,CRT	1749938-1749967	30	KU686211	Synechococcus phage S-WAM2 isolate 0810PA29, complete genome	89538-89567	9	0.7

1. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP015861 (Lactobacillus plantarum strain LZ227 plasmid LZ227p3, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

2. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP035135 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed4) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

3. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP019032 (Lactobacillus fermentum strain SNUV175 plasmid pSNU175-3, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

4. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP029548 (Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

5. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP029548 (Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

6. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP029548 (Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

7. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP029548 (Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

8. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP032360 (Lactobacillus plantarum strain ZFM55 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

9. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP018212 (Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

10. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP043940 (Lactobacillus nenjiangensis strain SH-Y15 plasmid pHY011, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

11. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP032643 (Lactobacillus plantarum strain ZFM9 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

12. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP018177 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

13. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP018179 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-3, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

14. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP018182 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

15. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP028244 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

16. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP054261 (Lactobacillus plantarum strain TCI507 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

17. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

18. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP032753 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

19. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP011405 (Lactobacillus salivarius str. Ren plasmid pR2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

20. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to CP033373 (Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

21. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to CP033373 (Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

22. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP032745 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

23. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP012651 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK03, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

24. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_LN898145 (Lactobacillus oligofermentans DSM 15707 = LMG 22743 isolate LACOL plasmid II, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

25. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP045037 (Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

26. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP018181 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

27. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP013152 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-4, complete sequence) position: , mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

28. spacer 3.15|1749608|30|NZ_CP017151|CRISPRCasFinder,CRT,PILER-CR matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 0, identity: 1.0

cgactgatcgaaaacaaacattagattata	CRISPR spacer
cgactgatcgaaaacaaacattagattata	Protospacer
******************************

29. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP054658 (Lactobacillus reuteri strain AN417 plasmid pAN417A, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtatacaagttaaa	Protospacer
*******************.***********

30. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NC_021503 (Lactobacillus reuteri I5007 plasmid pLRI01, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtatacaagttaaa	Protospacer
*******************.***********

31. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP040502 (Lactobacillus paragasseri JV-V03 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.935

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
taggtctagaataaaaagtgtacaagttaaa	Protospacer
*.**.**************************

32. spacer 3.2|1748750|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 2, identity: 0.933

ttactttgaggttacttactttggcgaaga	CRISPR spacer
ttactttgagattacttactttggtgaaga	Protospacer
**********.*************.*****

33. spacer 3.10|1749278|30|NZ_CP017151|CRISPRCasFinder,CRT,PILER-CR matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 2, identity: 0.933

gtctgatatggcgggctgaccgttgccccc	CRISPR spacer
gtctgatatggcgggctgaccactgccccc	Protospacer
*********************..*******

34. spacer 3.13|1749476|30|NZ_CP017151|CRISPRCasFinder,CRT,PILER-CR matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 2, identity: 0.933

cgaacccgaagtgactggtaccgacccgaa	CRISPR spacer
cgaatccgaagggactggtaccgacccgaa	Protospacer
****.****** ******************

35. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP045730 (Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.903

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagtctta	Protospacer
***************************.  *

36. spacer 3.4|1748882|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 3, identity: 0.9

taacaaacagtgaatagcaaagacgggtag	CRISPR spacer
taacaaacagtgaatagtaaggacgggtgg	Protospacer
*****************.**.*******.*

37. spacer 3.5|1748948|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 3, identity: 0.9

tgatatgctagttatggagaattaaaatcc	CRISPR spacer
tgatatgctagttatggaaaattaaaaccg	Protospacer
******************.********.*

38. spacer 3.11|1749344|30|NZ_CP017151|CRISPRCasFinder,CRT,PILER-CR matches to CP033375 (Lactobacillus fermentum strain DR9 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.9

tgagagcaacgaccattacataaaaggttg	CRISPR spacer
cgagagcaacggccattacataaaagattg	Protospacer
.**********.**************.***

39. spacer 3.11|1749344|30|NZ_CP017151|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034100 (Lactobacillus fermentum strain LMT2-75 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.9

tgagagcaacgaccattacataaaaggttg	CRISPR spacer
cgagagcaacggccattacataaaagattg	Protospacer
.**********.**************.***

40. spacer 3.12|1749410|30|NZ_CP017151|CRISPRCasFinder,CRT,PILER-CR matches to CP033375 (Lactobacillus fermentum strain DR9 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.9

tgagagcaacgaccattacataaaaggttg	CRISPR spacer
cgagagcaacggccattacataaaagattg	Protospacer
.**********.**************.***

41. spacer 3.12|1749410|30|NZ_CP017151|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034100 (Lactobacillus fermentum strain LMT2-75 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.9

tgagagcaacgaccattacataaaaggttg	CRISPR spacer
cgagagcaacggccattacataaaagattg	Protospacer
.**********.**************.***

42. spacer 3.14|1749542|30|NZ_CP017151|CRISPRCasFinder,CRT,PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 3, identity: 0.9

tagtcgccctgttttaaagggggttcacta	CRISPR spacer
aagtcgccccgttttaaagggtgttcacta	Protospacer
 ********.*********** ********

43. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to AP014427 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S28-C14, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gtaaaggagatggaagataatgataatgcc	Protospacer
*********.***** ******* * *..*

44. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to AP014428 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S29-C101, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gtaaaggagatggaagataatgataatgcc	Protospacer
*********.***** ******* * *..*

45. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to AP013719 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22A-MedDCM-OCT-S33-C25, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gtaaaggagatggaagataatgataatgcc	Protospacer
*********.***** ******* * *..*

46. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NC_015980 (Lactobacillus sanfranciscensis TMW 1.1304 plasmid pLS2, complete sequence) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gtaaaggagatggaatttaatgagcctaac	Protospacer
*********.****** ******. .** *

47. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to AP014435 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22C-MedDCM-OCT-S41-C155, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gtaaaggagatggaagataatgataatgcc	Protospacer
*********.***** ******* * *..*

48. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to AP013716 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S38-C22, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gtaaaggagatggaagataatgataatgcc	Protospacer
*********.***** ******* * *..*

49. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to AP013443 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C22C-MedDCM-OCT-S23-C7) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gtaaaggagatggaagataatgataatgcc	Protospacer
*********.***** ******* * *..*

50. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc-	CRISPR spacer
agaaaggaggtgtaatataatg-acttataa	Protospacer
. ********** ********* * ****

51. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to AP013721 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22A-MedDCM-OCT-S45-C35, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gtaaaggagatggaaaataatgataatgcc	Protospacer
*********.***** ******* * *..*

52. spacer 3.3|1748816|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

ggaactcgcccgtgctaggatcggatccat	CRISPR spacer
ggaactcgcccgtgctgggctcggtttcgc	Protospacer
****************.** **** *.*..

53. spacer 3.5|1748948|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to MH243439 (Escherichia phage vB_EcoM_NBG2, complete genome) position: , mismatch: 6, identity: 0.8

tgatatgctagttatggagaattaa---aatcc	CRISPR spacer
ttatatgctaattatggcgaattaattgaa---	Protospacer
* ********.****** *******   **

54. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054658 (Lactobacillus reuteri strain AN417 plasmid pAN417A, complete sequence) position: , mismatch: 7, identity: 0.767

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ataaaggaggtgaaataaaatgaagtcaat	Protospacer
.***********.**** ******.*.* .

55. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009299 (Bacillus cereus D17 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
tgaaaggaggtgaaatattatgaaaaaatt	Protospacer
  **********.***** ******  **.

56. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053930 (Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
tgaaaggaggtgaaatattatgaaaaaatt	Protospacer
  **********.***** ******  **.

57. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033789 (Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
tgaaaggaggtgaaatattatgaaaaaatt	Protospacer
  **********.***** ******  **.

58. spacer 3.20|1749938|30|NZ_CP017151|CRISPRCasFinder,CRT matches to MN693466 (Marine virus AFVG_25M243, complete genome) position: , mismatch: 7, identity: 0.767

tatgtacaacggtaagccaatcaataatca	CRISPR spacer
tatgttaaacggtaagccaatcaaagagtg	Protospacer
*****  ***************** .* ..

59. spacer 3.20|1749938|30|NZ_CP017151|CRISPRCasFinder,CRT matches to MN693525 (Marine virus AFVG_25M131, complete genome) position: , mismatch: 7, identity: 0.767

tatgtacaacggtaagccaatcaataatca	CRISPR spacer
tatgttaaacggtaagccaatcaaagagtg	Protospacer
*****  ***************** .* ..

60. spacer 3.20|1749938|30|NZ_CP017151|CRISPRCasFinder,CRT matches to MW057854 (Providencia phage PSTCR2, complete genome) position: , mismatch: 7, identity: 0.767

tatgtacaacggtaagccaatcaataatca	CRISPR spacer
tgactccaaaggtaagccaatcaagaatcc	Protospacer
*.  * *** ************** ****

61. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 8, identity: 0.733

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
gaattagagttggaatataatgaaattcaa	Protospacer
* *  .*** *****************

62. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007647 (Lactobacillus salivarius strain JCM1046 plasmid pMP1046A, complete sequence) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

63. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007647 (Lactobacillus salivarius strain JCM1046 plasmid pMP1046A, complete sequence) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

64. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

65. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

66. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

67. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

68. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

69. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT604075 (Lactobacillus salivarius isolate LPM01 plasmid II) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

70. spacer 3.1|1748684|30|NZ_CP017151|PILER-CR,CRISPRCasFinder,CRT matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 9, identity: 0.7

gtaaaggaggtggaatataatgaaattatc	CRISPR spacer
ttaaaggaggtgaaatacaatgaagaagat	Protospacer
 ***********.****.******.  . .

71. spacer 3.20|1749938|30|NZ_CP017151|CRISPRCasFinder,CRT matches to KU686211 (Synechococcus phage S-WAM2 isolate 0810PA29, complete genome) position: , mismatch: 9, identity: 0.7

tatgtacaacggtaagccaatcaataatca	CRISPR spacer
tgatgctaacggtaatccaatcaataatgg	Protospacer
*.    .******** ************ .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

712 : 59161

Lactobacillus_phage(31.25%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_187331090.1\|712_1699_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.1e-45	37.2
WP_069775544.1\|1834_2017_-	hypothetical protein	NA	NA	NA	NA
WP_041807739.1\|2327_2690_-	hypothetical protein	NA	NA	NA	NA
WP_069775545.1\|2763_3681_-	EamA family transporter	NA	NA	NA	NA
WP_021349460.1\|3923_4508_+	DUF4352 domain-containing protein	A0A0P0IXE0	Lactobacillus_phage	1.1e-41	63.2
WP_069775546.1\|4614_6468_-	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	4.4e-217	62.3
WP_069775547.1\|6593_7520_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	2.1e-63	42.6
WP_003682978.1\|7616_8474_+	patatin family protein	NA	NA	NA	NA
WP_003682977.1\|8568_9741_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_015639038.1\|9750_10851_+	AI-2E family transporter	NA	NA	NA	NA
WP_069775548.1\|10930_11671_+	sulfite exporter TauE/SafE family protein	Q6EVM7	Oenoccocus_phage	7.7e-48	41.0
WP_003684752.1\|11864_12362_-	phosphatidylglycerophosphatase A	A0A291I9Q0	Lactobacillus_phage	1.8e-45	54.3
WP_069775549.1\|12386_13427_-	serine hydrolase	NA	NA	NA	NA
WP_069775550.1\|13423_14623_-	hypothetical protein	NA	NA	NA	NA
WP_164879383.1\|14638_14815_-	hypothetical protein	NA	NA	NA	NA
WP_003682969.1\|14822_15680_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_069775551.1\|15818_18167_-	hypothetical protein	NA	NA	NA	NA
WP_069775552.1\|18507_19395_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_069775553.1\|19485_20373_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_069775554.1\|20447_21818_-	C69 family dipeptidase	NA	NA	NA	NA
WP_069775555.1\|21817_22549_-	hypothetical protein	NA	NA	NA	NA
WP_187331090.1\|22612_23599_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.1e-45	37.2
WP_069775556.1\|23785_25468_-	acetolactate synthase AlsS	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	8.4e-34	23.4
WP_069775557.1\|26024_26381_-	DUF4256 domain-containing protein	NA	NA	NA	NA
WP_069775559.1\|27422_28052_-	DUF4038 domain-containing protein	NA	NA	NA	NA
WP_082229413.1\|28193_29411_-	NADH-dependent oxidoreductase	NA	NA	NA	NA
WP_069775560.1\|29510_30461_-	sugar-binding transcriptional regulator	NA	NA	NA	NA
WP_069775561.1\|30563_31271_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_069775562.1\|31285_32401_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	7.5e-71	41.2
WP_069775563.1\|32405_33605_-	phosphopentomutase	NA	NA	NA	NA
WP_069775564.1\|33617_34286_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_069775565.1\|34794_35100_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_069775566.1\|35101_36010_-	type II CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_069775567.1\|36556_37024_-	hypothetical protein	NA	NA	NA	NA
WP_069776248.1\|37384_37999_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	2.8e-27	38.0
WP_155762347.1\|37935_38841_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.1e-14	30.8
WP_130125071.1\|38865_39816_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	4.5e-16	30.2
WP_012391635.1\|39740_40433_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069775569.1\|40758_41091_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	4.0e-12	40.9
WP_004563102.1\|41087_41453_-	CrcB family protein	NA	NA	NA	NA
WP_004563103.1\|41576_41969_+	VOC family protein	NA	NA	NA	NA
WP_003683563.1\|42043_42601_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069775570.1\|42875_44591_+	AarF/ABC1/UbiB kinase family protein	A0A0P0CRP3	Ostreococcus_lucimarinus_virus	5.0e-34	29.0
WP_004563106.1\|44652_45351_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003683555.1\|45639_46557_-	ROK family protein	NA	NA	NA	NA
WP_003683553.1\|46628_46904_+	hypothetical protein	NA	NA	NA	NA
WP_069775571.1\|46930_47389_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
WP_069775572.1\|48478_48973_-	hypothetical protein	NA	NA	NA	NA
WP_069775573.1\|49218_50178_+	transcriptional regulator	NA	NA	NA	NA
WP_069775574.1\|50379_51900_+	gluconokinase	NA	NA	NA	NA
WP_003683541.1\|51921_53268_+	gluconate permease	NA	NA	NA	NA
WP_069775575.1\|53394_54399_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_046948892.1\|54411_54753_+	Fe-S cluster assembly protein HesB	NA	NA	NA	NA
WP_069775576.1\|55006_56194_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_048340097.1\|56395_56929_-	VanZ family protein	NA	NA	NA	NA
WP_012390701.1\|57379_57832_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	51.5
WP_069775577.1\|57910_59161_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	1.2e-56	36.5

DBSCAN-SWA_2

123633 : 176276

Staphylococcus_phage(30.77%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069775606.1\|123633_124884_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_004563179.1\|125674_127684_+	KUP/HAK/KT family potassium transporter	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	2.0e-66	35.7
WP_003683387.1\|127902_128349_-	hypothetical protein	NA	NA	NA	NA
WP_004563180.1\|128345_129857_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_003683382.1\|129924_130149_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_069775607.1\|130174_132046_-	monovalent cation:proton antiporter family protein	NA	NA	NA	NA
WP_003683380.1\|132154_133567_-	C69 family dipeptidase	NA	NA	NA	NA
WP_042513914.1\|134182_135469_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.0e-47	31.2
WP_069775590.1\|135559_136558_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.3e-50	38.4
WP_004563185.1\|137080_138391_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_069775608.1\|138569_139928_-\|transposase	transposase	NA	NA	NA	NA
WP_003683374.1\|140127_140397_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_069775609.1\|140499_141363_-	metallophosphoesterase family protein	NA	NA	NA	NA
WP_069776253.1\|141619_143011_+	MFS transporter	NA	NA	NA	NA
WP_174233967.1\|143041_144268_+	MFS transporter	NA	NA	NA	NA
WP_012391369.1\|144431_145820_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_069775611.1\|146006_147233_+	MFS transporter	NA	NA	NA	NA
WP_069775612.1\|147364_148249_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	5.6e-05	31.2
WP_069775613.1\|148268_149390_-	lipolytic protein G-D-S-L family protein	NA	NA	NA	NA
WP_003683356.1\|149444_150464_-	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	4.5e-14	30.4
WP_003683354.1\|150492_151899_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	7.3e-47	28.8
WP_012391374.1\|151905_153195_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_004563195.1\|153210_154188_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_069775614.1\|154190_155282_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA
WP_003683349.1\|155632_155953_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_003683348.1\|156234_156561_-	AzlD domain-containing protein	NA	NA	NA	NA
WP_069775615.1\|156557_157259_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_069775616.1\|157266_158775_-	threonine synthase	NA	NA	NA	NA
WP_003683342.1\|158888_160166_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_003683341.1\|160175_161036_+	homoserine kinase	NA	NA	NA	NA
WP_004563200.1\|161267_161792_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069775617.1\|161892_162534_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_024500994.1\|162656_163313_+	HD domain-containing protein	A0A1S5V2G8	Saudi_moumouvirus	2.9e-06	27.9
WP_069775618.1\|163309_164053_-	peroxide stress protein YaaA	NA	NA	NA	NA
WP_003683330.1\|164326_164938_-	hypothetical protein	NA	NA	NA	NA
WP_069775619.1\|164934_165813_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	1.2e-15	38.2
WP_069775620.1\|166003_167695_+	NFACT family protein	M1I5P2	Paramecium_bursaria_Chlorella_virus	8.5e-10	36.2
WP_069775621.1\|169748_170888_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.3e-42	33.1
WP_012391386.1\|172910_173327_-	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	1.0e-25	46.8
WP_069775622.1\|173338_174376_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_012391388.1\|174426_174744_-	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	4.0e-22	51.1
WP_069775608.1\|174917_176276_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

349914 : 415819

Streptococcus_phage(16.67%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069775666.1\|349914_351603_-\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	9.0e-68	32.0
WP_069775667.1\|352021_352381_-	hypothetical protein	NA	NA	NA	NA
WP_003683669.1\|352379_352862_+	hypothetical protein	NA	NA	NA	NA
WP_015639257.1\|352862_353996_-	dihydropteroate synthase	NA	NA	NA	NA
WP_015639258.1\|353979_354570_-	non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_015639259.1\|354550_355831_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_003683662.1\|355827_356400_-	GTP cyclohydrolase I FolE	A0A2I7S8W4	Vibrio_phage	1.5e-35	43.4
WP_003686165.1\|356381_356900_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_021349083.1\|356889_357261_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_069775668.1\|357476_358160_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003686160.1\|358178_359186_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	6.6e-26	31.5
WP_003683654.1\|359259_359868_-	hypothetical protein	NA	NA	NA	NA
WP_003683652.1\|359997_360630_+	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	8.6e-48	46.8
WP_069775669.1\|360729_361848_-	glycoside hydrolase family 73 protein	A0A0K2CP65	Brevibacillus_phage	7.9e-20	43.1
WP_069775670.1\|361938_363327_-	L,D-transpeptidase	NA	NA	NA	NA
WP_003683646.1\|363451_363952_-	universal stress protein	NA	NA	NA	NA
WP_069775671.1\|364031_365432_-	dipeptidase PepV	NA	NA	NA	NA
WP_069775672.1\|365538_366414_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_003686149.1\|366407_366785_+	DUF302 domain-containing protein	NA	NA	NA	NA
WP_015639265.1\|366829_368476_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_003683636.1\|368588_368852_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_003686144.1\|369174_371592_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	66.8
WP_069775673.1\|371929_372661_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_015639269.1\|372919_374161_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.4e-107	55.1
WP_069775674.1\|374163_374955_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.1e-43	39.1
WP_003686137.1\|375237_376425_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.7e-143	67.9
WP_069775675.1\|376618_377350_+	hypothetical protein	NA	NA	NA	NA
WP_003686135.1\|377443_377980_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_069775676.1\|378019_379453_-	MFS transporter	NA	NA	NA	NA
WP_003683620.1\|379574_380030_+	transcriptional repressor	NA	NA	NA	NA
WP_012391503.1\|380248_381616_-	amino acid permease	NA	NA	NA	NA
WP_003683616.1\|381787_381946_+	hypothetical protein	NA	NA	NA	NA
WP_003686127.1\|381955_382573_+	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA
WP_069775677.1\|382675_382918_-	hypothetical protein	NA	NA	NA	NA
WP_069775678.1\|383225_384476_-\|transposase	transposase	A0A286QQE5	Streptococcus_phage	1.5e-56	37.0
WP_069775679.1\|384554_385007_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	51.5
WP_012391508.1\|385837_386269_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_012391509.1\|386480_386984_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_069775680.1\|387137_387965_-	LysM peptidoglycan-binding domain-containing protein	A0A288TY55	Enterococcus_phage	3.5e-17	67.7
WP_155762350.1\|388373_389402_-	NAD(P)-dependent alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.4e-07	25.2
WP_003683599.1\|389548_390886_-	purine/pyrimidine permease	NA	NA	NA	NA
WP_069775682.1\|391037_391910_-	SufD family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_003686107.1\|391918_392500_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0C5K925	Enterococcus_phage	4.8e-53	59.7
WP_031284742.1\|392444_394661_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.3e-247	58.8
WP_003683592.1\|395028_395712_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003683590.1\|395734_396556_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_069775683.1\|396820_397006_-	hypothetical protein	NA	NA	NA	NA
WP_069775685.1\|398176_399397_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	1.1e-94	46.0
WP_015638546.1\|399629_400067_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	6.3e-50	71.7
WP_003683586.1\|400187_400337_+	hypothetical protein	NA	NA	NA	NA
WP_003684211.1\|406974_407223_-	DUF1797 family protein	NA	NA	NA	NA
WP_004563064.1\|407556_408576_-	flippase-like domain-containing protein	NA	NA	NA	NA
WP_035437166.1\|408577_409603_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_035437163.1\|409595_410813_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_035431250.1\|412760_413027_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_004563060.1\|413156_413399_-	hypothetical protein	NA	NA	NA	NA
WP_069775687.1\|413572_415819_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	4.9e-122	40.5

DBSCAN-SWA_4

472671 : 508670

Bacillus_phage(33.33%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069775715.1\|472671_473265_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_069775716.1\|473281_473503_+	hypothetical protein	NA	NA	NA	NA
WP_069775717.1\|473540_474230_-	class I SAM-dependent methyltransferase	A0A097BYE1	Leuconostoc_phage	1.5e-34	41.6
WP_012391566.1\|474392_474965_-	NADPH-dependent F420 reductase	NA	NA	NA	NA
WP_075667505.1\|474967_475411_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_082229436.1\|477154_477661_-\|tRNA	prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_035437193.1\|477736_478519_+	dimethylargininase	NA	NA	NA	NA
WP_069775719.1\|478906_480304_+	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_015639354.1\|480460_481501_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_069775720.1\|482367_483087_+	hypothetical protein	NA	NA	NA	NA
WP_023465987.1\|483574_484696_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_069775721.1\|485105_485369_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_003684069.1\|485365_485620_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_041807836.1\|485868_486156_+\|transposase	transposase	NA	NA	NA	NA
WP_069775722.1\|486179_487058_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.8e-40	35.7
WP_080650602.1\|487855_488620_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_069775723.1\|488744_489638_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.7e-39	35.8
WP_003688751.1\|489661_489949_-\|transposase	transposase	NA	NA	NA	NA
WP_069775724.1\|490714_491644_-	abortive infection family protein	NA	NA	NA	NA
WP_069775725.1\|491991_493368_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.4e-130	52.2
WP_069775726.1\|493482_494490_-	diacylglycerol kinase	NA	NA	NA	NA
WP_003681638.1\|494502_495927_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_024501129.1\|495940_497404_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_004562976.1\|497403_497724_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_015639377.1\|497898_499011_-	CamS family sex pheromone protein	NA	NA	NA	NA
WP_069775727.1\|499013_501053_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	1.3e-100	34.9
WP_035430725.1\|501054_503325_-	DNA helicase PcrA	A7KV33	Bacillus_phage	8.2e-133	41.8
WP_003681628.1\|503502_504675_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_012391584.1\|504676_505264_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_069775728.1\|505279_505894_-	glycoside hydrolase family 73 protein	S5M633	Brevibacillus_phage	2.9e-32	51.7
WP_003681624.1\|506168_506942_-	(S)-acetoin forming diacetyl reductase	Q06VL0	Trichoplusia_ni_ascovirus	1.4e-15	30.2
WP_069775729.1\|507419_508670_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	4.0e-57	37.0

DBSCAN-SWA_5

707493 : 811842

Streptococcus_phage(20.59%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069775803.1\|707493_707964_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.9e-32	51.5
WP_069775678.1\|708042_709293_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	1.5e-56	37.0
WP_187331090.1\|709771_710758_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.1e-45	37.2
WP_069775805.1\|711562_714274_-	YhgE/Pip domain-containing protein	NA	NA	NA	NA
WP_069775806.1\|714312_714849_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_069775807.1\|715074_716118_+	galactose mutarotase	NA	NA	NA	NA
WP_069775808.1\|716370_717288_-	hypothetical protein	NA	NA	NA	NA
WP_046948921.1\|717299_717761_-	hypothetical protein	NA	NA	NA	NA
WP_003681269.1\|717861_718311_-	transcriptional repressor	NA	NA	NA	NA
WP_003681268.1\|718351_718936_-	guanylate kinase	S4W1R9	Pandoravirus	5.5e-09	34.5
WP_015639519.1\|718935_719352_-	NUDIX domain-containing protein	A0A2H4UTN1	Bodo_saltans_virus	2.4e-06	32.3
WP_069775809.1\|719452_720841_+	amino acid permease	NA	NA	NA	NA
WP_069775810.1\|721327_723724_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA
WP_024501211.1\|723805_724717_+	proline-specific peptidase family protein	NA	NA	NA	NA
WP_003681263.1\|724738_725377_+	HAD family hydrolase	NA	NA	NA	NA
WP_069775811.1\|725695_727432_+	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_003681260.1\|727659_728610_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	2.9e-92	52.7
WP_069775812.1\|728619_729540_-	ribonucleotide-diphosphate reductase subunit beta	A0A160DHK0	Gordonia_phage	6.7e-25	30.9
WP_015639528.1\|729550_731716_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	4.7e-239	57.6
WP_003681257.1\|731712_732174_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_069775813.1\|732527_733127_+	L,D-transpeptidase	NA	NA	NA	NA
WP_003685372.1\|733119_733263_+	hypothetical protein	NA	NA	NA	NA
WP_003685377.1\|733481_734555_-	phosphoesterase	A0A289YMW0	Serratia_phage	7.8e-09	25.9
WP_003681253.1\|734643_736188_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	3.2e-48	27.9
WP_003685378.1\|736747_737740_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003685380.1\|737739_738639_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_069775814.1\|738631_739393_+	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	2.9e-10	27.4
WP_003685385.1\|740177_741392_-	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	1.7e-28	29.8
WP_069775816.1\|741628_742948_+	MATE family efflux transporter	NA	NA	NA	NA
WP_041813090.1\|743232_744108_-	ROK family protein	NA	NA	NA	NA
WP_069775817.1\|744127_745480_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_187331090.1\|745709_746696_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.1e-45	37.2
WP_069775608.1\|746852_748211_-\|transposase	transposase	NA	NA	NA	NA
WP_069775818.1\|748339_749311_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_069775819.1\|749294_750179_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.1e-19	27.9
WP_003681233.1\|750298_751219_-	ribokinase	NA	NA	NA	NA
WP_069775820.1\|751571_752735_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.2e-159	71.4
WP_015638546.1\|752731_753169_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	6.3e-50	71.7
WP_023465618.1\|753314_753635_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	4.2e-19	41.6
WP_069775821.1\|753609_754419_-	TerC family protein	S5MAL1	Bacillus_phage	3.4e-41	43.6
WP_100191465.1\|754475_755363_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_023465621.1\|755471_756392_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_069775822.1\|756613_757945_+	purine permease	Q9KX94	Enterobacteria_phage	1.4e-28	29.5
WP_021349996.1\|757973_758828_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_012391720.1\|759111_759765_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_069775823.1\|759988_762118_+	LTA synthase family protein	W6LM83	Streptococcus_phage	1.3e-169	49.4
WP_069775824.1\|762512_762989_+	hypothetical protein	NA	NA	NA	NA
WP_069775825.1\|763713_764262_-	DNA-binding protein	NA	NA	NA	NA
WP_069775826.1\|764261_764492_-	cation transporter	NA	NA	NA	NA
WP_069775827.1\|764553_766407_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.8e-83	34.6
WP_003681199.1\|766600_767593_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	1.0e-18	41.1
WP_069775828.1\|767765_768725_+	nucleoside hydrolase	NA	NA	NA	NA
WP_021816586.1\|769261_769831_+	ECF transporter S component	NA	NA	NA	NA
WP_069775829.1\|769834_771217_+	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	8.0e-14	29.7
WP_069775830.1\|771206_771860_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_069775831.1\|771904_772264_+	DUF4870 domain-containing protein	NA	NA	NA	NA
WP_082229449.1\|772354_774316_+	sodium:proton antiporter	NA	NA	NA	NA
WP_069775832.1\|774733_775747_-	lipoate--protein ligase	NA	NA	NA	NA
WP_041813842.1\|776184_777435_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.2e-56	37.0
WP_003685422.1\|778315_779278_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003685424.1\|779406_779832_+	helix-turn-helix transcriptional regulator	A0A0H4ITV7	Staphylococcus_phage	1.9e-06	42.9
WP_003681179.1\|779828_780680_+	hypothetical protein	NA	NA	NA	NA
WP_069775833.1\|781050_781527_-	hypothetical protein	NA	NA	NA	NA
WP_003681177.1\|781533_781932_-	hypothetical protein	NA	NA	NA	NA
WP_003681176.1\|782030_782501_+	universal stress protein	NA	NA	NA	NA
WP_069775834.1\|782527_782878_+	ANTAR domain-containing protein	NA	NA	NA	NA
WP_003685435.1\|783057_783876_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_003681172.1\|784090_785452_-	MFS transporter	NA	NA	NA	NA
WP_069775835.1\|785662_787666_-	transketolase	NA	NA	NA	NA
WP_069775836.1\|787678_788425_-	transaldolase	E3SKN5	Synechococcus_phage	5.6e-14	30.2
WP_082229450.1\|788822_789578_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	6.0e-24	35.4
WP_069775838.1\|789579_790458_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_069775839.1\|790497_792192_-	FAD-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	5.0e-42	26.3
WP_069775840.1\|792492_793380_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_069775841.1\|793537_794377_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_069775842.1\|794393_795221_+	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	5.4e-18	26.9
WP_069775843.1\|796545_797226_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
WP_069775845.1\|798524_799475_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_015639559.1\|799916_800897_-	HoxN/HupN/NixA family nickel/cobalt transporter	NA	NA	NA	NA
WP_015639560.1\|800983_801706_-	aquaporin family protein	M1IAZ4	Acanthocystis_turfacea_Chlorella_virus	8.1e-26	32.2
WP_069775846.1\|801713_802550_-	ATP-dependent sacrificial sulfur transferase LarE	NA	NA	NA	NA
WP_003681156.1\|802556_803789_-	nickel pincer cofactor biosynthesis protein LarC	NA	NA	NA	NA
WP_003681154.1\|803785_804547_-	nickel pincer cofactor biosynthesis protein LarB	A0A288TYA6	Enterococcus_phage	5.2e-23	43.4
WP_069775847.1\|804549_805830_-	nickel-dependent lactate racemase	NA	NA	NA	NA
WP_069775848.1\|806035_806722_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_187331091.1\|806800_807787_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.6e-45	36.9
WP_069775850.1\|807802_808576_+\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	1.2e-62	53.7
WP_069775851.1\|808854_810576_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_187331090.1\|810855_811842_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.1e-45	37.2

DBSCAN-SWA_6

1004850 : 1072524

Bacillus_phage(15.38%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003682401.1\|1004850_1005864_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_069775917.1\|1006121_1007375_-\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	1.7e-84	42.0
WP_069775918.1\|1007844_1009299_+	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_069775919.1\|1009302_1010046_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-32	41.4
WP_069775920.1\|1010552_1011926_+	amino acid permease	NA	NA	NA	NA
WP_015638455.1\|1012735_1013935_+	nucleoside transporter	NA	NA	NA	NA
WP_003685735.1\|1014168_1015089_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA
WP_035430894.1\|1015277_1016015_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_069775921.1\|1016033_1016969_+	nucleoid occlusion protein	S5VSZ7	Leptospira_phage	4.6e-13	32.1
WP_082229454.1\|1016982_1017816_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.8e-16	32.9
WP_069775923.1\|1017828_1018029_+	DUF951 domain-containing protein	NA	NA	NA	NA
WP_003682418.1\|1018044_1019142_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_069775924.1\|1019175_1019949_+	DUF1129 domain-containing protein	NA	NA	NA	NA
WP_069775925.1\|1020215_1021358_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.7e-58	32.2
WP_069775926.1\|1021707_1022709_+	LCP family protein	NA	NA	NA	NA
WP_069775927.1\|1022708_1023479_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_069775928.1\|1023495_1024236_+	CpsD/CapB family tyrosine-protein kinase	NA	NA	NA	NA
WP_069775929.1\|1024262_1025033_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_035437030.1\|1025063_1026005_+	GDP-mannose 4,6-dehydratase	A0A1V0SAI6	Catovirus	5.0e-44	36.3
WP_069776266.1\|1025982_1026657_+	exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase	NA	NA	NA	NA
WP_069775930.1\|1026693_1027527_+	glycosyltransferase	F2Y1U7	Organic_Lake_phycodnavirus	5.1e-16	29.9
WP_155762357.1\|1028647_1029889_+	hypothetical protein	NA	NA	NA	NA
WP_069775931.1\|1029836_1030736_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_046949115.1\|1030837_1031863_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.3e-42	35.1
WP_003688751.1\|1032062_1032350_+\|transposase	transposase	NA	NA	NA	NA
WP_069775932.1\|1032373_1033252_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	6.8e-43	36.8
WP_069775933.1\|1033459_1034317_+	LicD family protein	A0A1V0SAS8	Catovirus	3.0e-11	35.9
WP_069775934.1\|1034306_1035797_+	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA
WP_069775935.1\|1035846_1036659_+	hypothetical protein	NA	NA	NA	NA
WP_069775936.1\|1036674_1037670_+	acyltransferase	NA	NA	NA	NA
WP_187331092.1\|1037663_1038395_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_069775938.1\|1038396_1039455_+	NAD(P)-dependent oxidoreductase	A0A2K9KZK0	Tupanvirus	3.0e-21	26.5
WP_069775939.1\|1039817_1041005_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_069775940.1\|1041325_1042204_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-42	36.4
WP_069775941.1\|1043205_1043712_-	cupin domain-containing protein	A0A291ATU0	Pandoravirus	9.7e-10	33.6
WP_024500629.1\|1043908_1044598_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.1e-35	36.3
WP_069775943.1\|1044795_1045938_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.5e-29	30.0
WP_069775944.1\|1045937_1047233_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	2.8e-05	23.8
WP_069775945.1\|1047567_1048428_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_031274479.1\|1048449_1048857_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_069775946.1\|1049054_1049600_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_069775947.1\|1049874_1051062_-	class I SAM-dependent methyltransferase	A0A2I2L5L3	Orpheovirus	1.4e-46	33.2
WP_041807629.1\|1051196_1051376_+	hypothetical protein	NA	NA	NA	NA
WP_069775948.1\|1051404_1052445_+	AI-2E family transporter	NA	NA	NA	NA
WP_021349288.1\|1052532_1054194_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_021815546.1\|1054480_1054966_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.4e-21	44.2
WP_069775949.1\|1054949_1056089_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_003682477.1\|1056107_1057403_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	8.2e-21	32.7
WP_069775950.1\|1057535_1058576_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_069775951.1\|1058587_1060138_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_069775952.1\|1060673_1061396_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	NA	NA	NA
WP_012390750.1\|1061398_1061641_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_069775953.1\|1061641_1062322_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_069775954.1\|1062325_1064551_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.8e-145	41.5
WP_054194046.1\|1064526_1065990_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.1e-61	34.6
WP_069775955.1\|1065989_1067027_+	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	1.5e-60	40.1
WP_023466051.1\|1067035_1067617_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	6.1e-24	32.4
WP_069775956.1\|1067618_1069154_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	5.8e-74	46.2
WP_069775957.1\|1069427_1070681_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_069775958.1\|1070926_1072090_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.0e-159	71.1
WP_012390758.1\|1072086_1072524_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.4e-49	71.0

DBSCAN-SWA_7

1231371 : 1239843

Enterococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021815675.1\|1231371_1233543_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.9e-249	59.4
WP_004563324.1\|1233642_1233864_-	glutaredoxin-like protein NrdH	X2KRY7	Enterococcus_phage	3.2e-10	54.7
WP_069776006.1\|1234120_1234645_+	nucleoside deaminase	A0A2H4PQS8	Staphylococcus_phage	2.0e-05	33.5
WP_069776007.1\|1234900_1236592_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	2.3e-55	38.6
WP_004562761.1\|1236614_1236923_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_004562762.1\|1236938_1237538_+	recombination protein RecR	NA	NA	NA	NA
WP_004562763.1\|1237539_1237788_+	YaaL family protein	NA	NA	NA	NA
WP_004562764.1\|1237807_1238452_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.6e-54	53.1
WP_004562765.1\|1238464_1238785_+	cyclic-di-AMP receptor	NA	NA	NA	NA
WP_069776008.1\|1238802_1239843_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.8e-27	32.1

DBSCAN-SWA_8

1286928 : 1321445

Streptococcus_phage(46.67%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003682589.1\|1286928_1287282_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_069776023.1\|1287296_1288259_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_069776024.1\|1288251_1289097_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_003682592.1\|1289093_1290107_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_003682593.1\|1290169_1291081_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.9e-70	46.1
WP_012390859.1\|1291603_1292383_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_069776025.1\|1292398_1293577_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_069776026.1\|1293601_1294576_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_015638493.1\|1294678_1295134_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	50.0
WP_069776027.1\|1295207_1296458_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.1e-57	37.3
WP_069776028.1\|1296682_1297099_+	cupin domain-containing protein	NA	NA	NA	NA
WP_069776029.1\|1297248_1298190_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.1e-78	48.4
WP_012390862.1\|1298202_1299021_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_015638627.1\|1299041_1299968_+	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	2.2e-100	58.0
WP_155762361.1\|1299988_1300366_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	2.7e-17	41.9
WP_155762367.1\|1300396_1300846_-	hypothetical protein	NA	NA	NA	NA
WP_015638629.1\|1301226_1302255_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_003682605.1\|1302280_1303222_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_003682606.1\|1303324_1304125_+	HAD family hydrolase	NA	NA	NA	NA
WP_069776030.1\|1304187_1305912_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	3.0e-196	60.2
WP_024500722.1\|1306126_1306762_+	HD domain-containing protein	NA	NA	NA	NA
WP_069776031.1\|1306767_1306998_+	hypothetical protein	NA	NA	NA	NA
WP_004563280.1\|1307097_1309113_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_069776032.1\|1309122_1311984_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	6.8e-302	54.8
WP_069776033.1\|1312073_1313159_+	hypothetical protein	NA	NA	NA	NA
WP_069776034.1\|1313377_1314247_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.3e-09	30.8
WP_003682620.1\|1314268_1315246_+	YvcK family protein	A1IMD5	Streptococcus_phage	2.7e-93	54.0
WP_003682621.1\|1315263_1316202_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.0e-49	37.1
WP_069776035.1\|1316425_1317676_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_015638493.1\|1317749_1318205_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	50.0
WP_003682627.1\|1318351_1318942_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.6e-56	56.8
WP_069776036.1\|1320176_1321445_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.3e-47	31.2

DBSCAN-SWA_9

1512303 : 1566323

Streptococcus_phage(15.38%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003686320.1\|1512303_1512810_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_069776086.1\|1512819_1515129_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.2e-85	49.6
WP_021815855.1\|1515263_1515380_-	DUF4044 domain-containing protein	NA	NA	NA	NA
WP_003682147.1\|1515456_1515843_+	hypothetical protein	NA	NA	NA	NA
WP_069776087.1\|1515984_1516416_+	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
WP_003682143.1\|1516430_1517375_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_069776088.1\|1517393_1517762_+	cell division protein	NA	NA	NA	NA
WP_069776089.1\|1517761_1519918_+	penicillin-binding protein	NA	NA	NA	NA
WP_069776090.1\|1519954_1520914_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_012390998.1\|1520941_1522318_+	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_003682130.1\|1522317_1523424_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_003686331.1\|1523440_1524286_+	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA
WP_003682126.1\|1524429_1525812_+	cell division protein FtsA	NA	NA	NA	NA
WP_003686334.1\|1525838_1527128_+	cell division protein FtsZ	NA	NA	NA	NA
WP_003686336.1\|1527166_1527637_+	cell division protein SepF	NA	NA	NA	NA
WP_003686338.1\|1527633_1527912_+	YggT family protein	NA	NA	NA	NA
WP_015638733.1\|1527922_1528708_+	RNA-binding protein	NA	NA	NA	NA
WP_003682117.1\|1528732_1529419_+	DivIVA domain-containing protein	NA	NA	NA	NA
WP_069776091.1\|1529712_1532505_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	1.1e-78	25.0
WP_003686347.1\|1532646_1532859_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_003682114.1\|1532860_1533409_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003682113.1\|1533409_1533646_+	hypothetical protein	NA	NA	NA	NA
WP_003682112.1\|1533658_1534366_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_003682111.1\|1534365_1534710_+	DUF1831 domain-containing protein	NA	NA	NA	NA
WP_003682110.1\|1534816_1535950_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_069776092.1\|1536045_1536456_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.5e-32	53.6
WP_069776093.1\|1536529_1537780_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.8e-57	37.0
WP_041807947.1\|1538372_1539968_+	amidohydrolase	NA	NA	NA	NA
WP_069776094.1\|1540075_1541008_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_003686355.1\|1541216_1541873_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_003682106.1\|1541887_1542577_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_069776095.1\|1542577_1545124_+	AAA family ATPase	A0A1P8DII4	Virus_Rctr197k	2.4e-32	29.1
WP_069775590.1\|1545381_1546380_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.3e-50	38.4
WP_003686362.1\|1547335_1547764_-	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
WP_069776097.1\|1547987_1548962_-	YegS/Rv2252/BmrU family lipid kinase	A0A1V0SBJ0	Catovirus	4.6e-08	24.7
WP_003682101.1\|1549221_1549437_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_003682098.1\|1549563_1550010_+	hypothetical protein	NA	NA	NA	NA
WP_069776098.1\|1550120_1550690_-	peptide deformylase	E3SLL2	Synechococcus_phage	9.8e-11	36.9
WP_024500785.1\|1550823_1551105_+	UPF0223 family protein	NA	NA	NA	NA
WP_069776099.1\|1551108_1551873_+	inositol monophosphatase family protein	NA	NA	NA	NA
WP_003682090.1\|1551950_1553798_+	translational GTPase TypA	E4ZFJ7	Streptococcus_phage	2.1e-22	33.3
WP_012391012.1\|1553900_1555100_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
WP_082229462.1\|1555086_1555383_+	YlbG family protein	NA	NA	NA	NA
WP_069776100.1\|1555385_1555946_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_003686377.1\|1555950_1556472_+	pantetheine-phosphate adenylyltransferase	NA	NA	NA	NA
WP_012391013.1\|1556455_1557505_+	PDZ domain-containing protein	NA	NA	NA	NA
WP_015638742.1\|1557576_1558245_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_003682078.1\|1558299_1558779_+	ComE operon protein 2	A7KUY9	Bacillus_phage	4.1e-34	56.7
WP_021350134.1\|1558779_1561017_+	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	1.6e-27	31.0
WP_069776101.1\|1561034_1562063_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_003682071.1\|1562301_1562556_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_003682069.1\|1562801_1563071_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_014562705.1\|1563454_1564642_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_069776270.1\|1564725_1565163_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	5.0e-47	71.4
WP_069775958.1\|1565159_1566323_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.0e-159	71.1

DBSCAN-SWA_10

1572702 : 1629685

Bacillus_phage(18.75%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003682055.1\|1572702_1573953_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.7e-135	57.1
WP_012391020.1\|1573966_1574560_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_003682052.1\|1574559_1574859_+	nucleoside triphosphate pyrophosphohydrolase family protein	A0A1S7FYY8	Listeria_phage	6.9e-24	51.5
WP_012391021.1\|1575125_1575272_-	hypothetical protein	NA	NA	NA	NA
WP_173031742.1\|1575474_1576206_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.9e-28	36.7
WP_069776103.1\|1576483_1578295_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_003682046.1\|1578359_1579667_+	GTPase ObgE	NA	NA	NA	NA
WP_069776104.1\|1579693_1580626_+	ribonuclease Z	NA	NA	NA	NA
WP_187331093.1\|1580652_1581486_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_069776106.1\|1581558_1583856_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.4e-70	29.3
WP_024500798.1\|1583875_1584397_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.3e-30	44.0
WP_003682041.1\|1584728_1585106_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_069776107.1\|1585185_1586184_-	D-2-hydroxyacid dehydrogenase	M1HTA3	Paramecium_bursaria_Chlorella_virus	2.3e-47	34.0
WP_024500799.1\|1586686_1587496_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
WP_012390701.1\|1587785_1588238_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	51.5
WP_069776108.1\|1588316_1589567_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	5.8e-56	36.8
WP_024500800.1\|1589742_1590279_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_024500801.1\|1590289_1590571_+	hypothetical protein	NA	NA	NA	NA
WP_069776109.1\|1590570_1590900_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003682029.1\|1591247_1591556_-	membrane protein	NA	NA	NA	NA
WP_069776110.1\|1592257_1592605_-	helix-turn-helix transcriptional regulator	E9LUL4	Lactobacillus_phage	4.6e-11	42.9
WP_069776111.1\|1592755_1593847_-	glycerol dehydrogenase	NA	NA	NA	NA
WP_015638760.1\|1594105_1594285_+	hypothetical protein	NA	NA	NA	NA
WP_069776112.1\|1595499_1595865_+	hypothetical protein	NA	NA	NA	NA
WP_012391034.1\|1596135_1596504_+	hypothetical protein	NA	NA	NA	NA
WP_069776113.1\|1596630_1597740_-	MFS transporter	NA	NA	NA	NA
WP_069776114.1\|1598325_1599915_-	asparagine synthase B	L7RC73	Acanthamoeba_polyphaga_moumouvirus	5.2e-102	40.1
WP_004563375.1\|1600840_1601071_+	hypothetical protein	NA	NA	NA	NA
WP_003682005.1\|1603413_1603854_-	hypothetical protein	NA	NA	NA	NA
WP_069776115.1\|1603864_1604854_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_155762363.1\|1604875_1605280_-	nucleoside 2-deoxyribosyltransferase	A0A1D3SPR3	Enterococcus_phage	5.7e-13	34.4
WP_003681998.1\|1605438_1606059_+	hypothetical protein	NA	NA	NA	NA
WP_155762364.1\|1606546_1607455_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	8.9e-14	26.9
WP_082229463.1\|1607391_1607742_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	5.5e-12	38.2
WP_003688751.1\|1607872_1608160_+\|transposase	transposase	NA	NA	NA	NA
WP_046948100.1\|1608183_1609062_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.5e-42	36.4
WP_069776118.1\|1609785_1610100_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_155762365.1\|1610588_1610765_+	hypothetical protein	NA	NA	NA	NA
WP_069776119.1\|1610893_1612057_+	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	7.2e-08	37.5
WP_069776121.1\|1614487_1614745_-	hypothetical protein	NA	NA	NA	NA
WP_069776122.1\|1614969_1615650_+	serine dehydratase	NA	NA	NA	NA
WP_003681986.1\|1615650_1616538_+	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA
WP_069776123.1\|1616534_1616849_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_069776124.1\|1617321_1617918_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_187331084.1\|1617953_1620563_+	hypothetical protein	NA	NA	NA	NA
WP_003685243.1\|1621976_1622711_-	lactate utilization protein C	NA	NA	NA	NA
WP_015638801.1\|1622703_1624221_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_003685238.1\|1624221_1625028_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_069776125.1\|1625280_1626450_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_069776126.1\|1626799_1627426_-	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	6.6e-16	52.9
WP_012391088.1\|1627581_1627833_+	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003685231.1\|1627909_1628137_+	YneF family protein	NA	NA	NA	NA
WP_003685229.1\|1628204_1628837_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_012391089.1\|1628932_1629685_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_11

1650442 : 1717680

Streptococcus_phage(27.78%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_130125071.1\|1650442_1651393_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	4.5e-16	30.2
WP_003681934.1\|1653023_1653503_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_003685200.1\|1653522_1654749_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_003681930.1\|1654785_1655088_+	YlxR family protein	NA	NA	NA	NA
WP_003681928.1\|1655080_1655404_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA
WP_069776133.1\|1655408_1657736_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	5.6e-20	24.6
WP_003685195.1\|1657748_1658111_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_003685192.1\|1658180_1659077_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_069776134.1\|1659087_1660053_+	riboflavin biosynthesis protein RibF	A0A1V0SD03	Indivirus	4.7e-05	27.5
WP_035436554.1\|1660167_1661556_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_012391103.1\|1663586_1664924_-	SLC45 family MFS transporter	NA	NA	NA	NA
WP_012391104.1\|1664932_1666627_-	alpha-glucosidase	NA	NA	NA	NA
WP_012391105.1\|1666784_1667771_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_021815959.1\|1669213_1669531_+	hypothetical protein	NA	NA	NA	NA
WP_003685179.1\|1669683_1670856_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_024271704.1\|1672509_1673472_+	ketopantoate reductase family protein	NA	NA	NA	NA
WP_003685171.1\|1673817_1674171_-	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_021815960.1\|1674183_1674795_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_069776137.1\|1674969_1676298_-	D-serine ammonia-lyase	NA	NA	NA	NA
WP_003685166.1\|1676587_1677988_-	amino acid permease	NA	NA	NA	NA
WP_041807745.1\|1678243_1678531_+\|transposase	transposase	NA	NA	NA	NA
WP_012391108.1\|1678554_1679433_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.7e-41	36.1
WP_041807747.1\|1680273_1680639_-	hypothetical protein	NA	NA	NA	NA
WP_041807749.1\|1680764_1681811_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_012391111.1\|1681821_1682409_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_003685154.1\|1682446_1684303_+	molecular chaperone DnaK	A0A2P1EIW2	Megavirus	3.2e-135	45.5
WP_069776138.1\|1684414_1685575_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	5.5e-16	29.0
WP_012391112.1\|1685980_1686529_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_003681896.1\|1686556_1686724_+	hypothetical protein	NA	NA	NA	NA
WP_041807752.1\|1686742_1687309_+	imidazole glycerol phosphate synthase	NA	NA	NA	NA
WP_003685146.1\|1687515_1688355_+	histidinol-phosphatase HisJ	NA	NA	NA	NA
WP_003685145.1\|1688676_1689837_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
WP_003685142.1\|1689829_1690444_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_069776139.1\|1690445_1691729_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_012391115.1\|1691730_1692315_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_012391116.1\|1692314_1692923_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_003685135.1\|1692919_1693645_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	A0A2H4UVM0	Bodo_saltans_virus	3.2e-06	28.3
WP_069776140.1\|1693634_1694420_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_003685131.1\|1694389_1694707_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_003681874.1\|1694708_1695029_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
WP_069776141.1\|1695041_1696127_+	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_069776142.1\|1696194_1698027_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	2.5e-23	26.1
WP_069776143.1\|1698539_1699043_-	hypothetical protein	NA	NA	NA	NA
WP_069776144.1\|1699078_1699702_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_069776146.1\|1701063_1702137_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	4.0e-90	48.2
WP_012391124.1\|1702148_1703324_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	8.4e-89	41.2
WP_069776148.1\|1704402_1705653_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.1e-57	37.3
WP_069776149.1\|1707015_1707471_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003681855.1\|1707631_1708102_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.0e-25	43.4
WP_069776150.1\|1708094_1709288_-	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.5e-96	48.4
WP_023465756.1\|1709274_1709883_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.4e-26	39.1
WP_003685109.1\|1709882_1710941_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	3.4e-41	33.9
WP_023466738.1\|1711351_1711837_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_023466734.1\|1712924_1713488_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.2e-31	43.8
WP_012391137.1\|1714436_1715609_+	cysteine desulfurase	NA	NA	NA	NA
WP_069776151.1\|1715898_1716351_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.4e-31	50.8
WP_069776152.1\|1716429_1717680_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	1.4e-57	36.3

DBSCAN-SWA_12

1838011 : 1846279

Staphylococcus_phage(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003683173.1\|1838011_1839214_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	3.4e-45	48.6
WP_069776207.1\|1839226_1841113_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	5.0e-51	29.0
WP_023466146.1\|1841178_1842138_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	3.5e-117	63.1
WP_003683166.1\|1842149_1842653_+	dihydrofolate reductase	A0A1Y0SUI9	Pseudomonas_phage	5.4e-21	36.0
WP_003684928.1\|1842632_1843262_-	hemolysin III family protein	NA	NA	NA	NA
WP_021816053.1\|1843428_1844271_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	3.0e-16	33.3
WP_003683161.1\|1844404_1845583_-	3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	8.7e-62	36.8
WP_015638929.1\|1845652_1846279_+	acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	4.0e-13	40.8

DBSCAN-SWA_13

1880939 : 1928919

Mycobacterium_phage(14.29%)

capsid,transposase,integrase

attL 1899509:1899525|attR 1914582:1914598

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046949115.1\|1880939_1881965_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.3e-42	35.1
WP_069776275.1\|1882186_1882828_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_049775684.1\|1883583_1884096_-	Fic family protein	NA	NA	NA	NA
WP_069776224.1\|1884487_1885045_-	adenine phosphoribosyltransferase	NA	NA	NA	NA
WP_069776225.1\|1885388_1886759_+	MFS transporter	NA	NA	NA	NA
WP_069776276.1\|1887484_1888621_+	aminotransferase	NA	NA	NA	NA
WP_164879411.1\|1888820_1888961_+	hypothetical protein	NA	NA	NA	NA
WP_003683063.1\|1889161_1889371_+	hypothetical protein	NA	NA	NA	NA
WP_069776226.1\|1889379_1890078_+\|capsid	capsid protein	O03929	Lactobacillus_phage	1.7e-57	53.8
WP_003683059.1\|1890791_1891682_-	alpha/beta hydrolase	A0A068F2G2	Mycobacterium_phage	3.9e-14	28.6
WP_003683058.1\|1891700_1892225_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_049183876.1\|1892572_1893499_+	YdcF family protein	NA	NA	NA	NA
WP_041812760.1\|1893532_1894405_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.7e-52	43.1
WP_015638975.1\|1894497_1894983_-	ECF transporter S component	NA	NA	NA	NA
WP_069776227.1\|1894998_1895829_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_069776228.1\|1895985_1897239_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_003683045.1\|1897556_1898636_+	tyrosine recombinase XerS	NA	NA	NA	NA
WP_048339968.1\|1898637_1899564_+	linear amide C-N hydrolase	A0A1J0F9I3	Only_Syngen_Nebraska_virus	2.2e-15	38.8
1899509:1899525	attL	NA	NA	NA	NA
WP_003684846.1\|1899590_1900769_-	putative C-S lyase	NA	NA	NA	NA
WP_003684844.1\|1901194_1902247_+	2,3-butanediol dehydrogenase	A0A2K9L7I1	Tupanvirus	1.6e-14	25.0
WP_003684840.1\|1903314_1903944_-	ABC transporter permease	NA	NA	NA	NA
WP_069776229.1\|1903940_1904708_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-22	37.6
WP_069776230.1\|1904688_1905333_-	ABC transporter permease	NA	NA	NA	NA
WP_003684836.1\|1905483_1906386_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_069776231.1\|1906526_1906976_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003683030.1\|1907013_1907439_-	OsmC family protein	NA	NA	NA	NA
WP_069776232.1\|1908052_1908646_-	flavodoxin	NA	NA	NA	NA
WP_069776233.1\|1908730_1909360_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_080545976.1\|1909416_1910040_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_023466098.1\|1910121_1910742_-\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	3.0e-21	35.3
WP_069776234.1\|1911038_1911818_-	alpha/beta hydrolase	A0A286MPZ4	Mycobacterium_phage	1.8e-07	29.4
WP_069776235.1\|1911801_1913235_-	triphosphoribosyl-dephospho-CoA synthase CitG	NA	NA	NA	NA
WP_069776236.1\|1913391_1914930_-	citrate lyase subunit alpha	NA	NA	NA	NA
1914582:1914598	attR	NA	NA	NA	NA
WP_069776237.1\|1914919_1915819_-	citrate (pro-3S)-lyase subunit beta	NA	NA	NA	NA
WP_069776238.1\|1915821_1916115_-	citrate lyase acyl carrier protein	NA	NA	NA	NA
WP_069776239.1\|1916116_1917166_-	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA
WP_069776240.1\|1917221_1918190_-	AEC family transporter	NA	NA	NA	NA
WP_155762366.1\|1918331_1918856_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155762361.1\|1918886_1919264_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	2.7e-17	41.9
WP_082229474.1\|1920647_1920875_-	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA
WP_082229481.1\|1920887_1921139_-	citrate lyase holo-[acyl-carrier protein] synthase	NA	NA	NA	NA
WP_069776241.1\|1921486_1921867_-	PaaI family thioesterase	NA	NA	NA	NA
WP_069776242.1\|1921901_1922723_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_069776243.1\|1922732_1924157_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	3.3e-71	32.9
WP_069776244.1\|1924204_1925398_+	MFS transporter	NA	NA	NA	NA
WP_082229482.1\|1925810_1926425_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	4.3e-28	38.0
WP_082229475.1\|1927321_1927759_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	5.9e-48	68.8
WP_069776245.1\|1927755_1928919_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	9.0e-160	71.1

Anti-CRISPR protein detection

Acr_ID: NZ_CP017151.1|WP_155762365.1|1610588_1610765_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP017151.1|WP_155762365.1|1610588_1610765_+|hypothetical-protein

1610588_1610765_+

58 aa aa

1572702-1629685

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP017151_2	Orphan	2.1\|1678163\|31\|NZ_CP017151\|CRISPRCasFinder	1678163-1678193	31	1607792-1607822	0

1. spacer 2.1|1678163|31|NZ_CP017151|CRISPRCasFinder matches to NZ_CP017151 position: 1607792-1607822, mismatch: 0

tgggcctagaataaaaagtgtacaagttaaa	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
*******************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017151

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information