CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP014693	Pseudomonas brassicacearum strain L13-6-12 chromosome, complete genome	9 crisprs	DinG,csa3,cas3,DEDDh,PD-DExK	3	0	5	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP014693_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_1

339472-339567

Orphan

Consensus_repeat	Method
GTACGACCGGAAGAGCCAGGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_1

>merge|NZ_CP014693|1|339472-339567|CRISPRCasFinder
GTACGACCGGAAGAGCCAGGTCGACTATTAGGCCGCCTCGCGAGCAAGCTTTGCTCCCACAGATCTGATGGGTGTACGACCGGGAGAGCCAGGTCG

>NZ_CP014693|1|1|339472-339567|CRISPRCasFinder
GTACGACCGGAAGAGCCAGGTCG	ACTATTAGGCCGCCTCGCGAGCAAGCTTTGCTCCCACAGATCTGATGGGT
GTACGACCGGGAGAGCCAGGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_013693411.1\|332038_332707_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP014693.1\|WP_069970823.1\|336395_338819_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273805
NZ_CP014693.1\|WP_069971599.1\|347420_349085_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341277
NZ_CP014693.1\|WP_081042449.1\|345682_347158_+\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP014693.1\|WP_038859627.1\|343589_344561_+\|NAD-dependent-epimerase	unknown	unknown	gnl\|CDD\|187563
NZ_CP014693.1\|WP_003202042.1\|334874_335384_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171561
NZ_CP014693.1\|WP_003202036.1\|338855_339257_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003202031.1\|340211_340775_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP014693.1\|WP_003202020.1\|345339_345633_+\|lipid-A-disaccharide-synthase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377870
NZ_CP014693.1\|WP_013693410.1\|332703_333888_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP014693.1\|WP_003202015.1\|349101_349863_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187629
NZ_CP014693.1\|WP_003202022.1\|344594_345338_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_CP014693.1\|WP_003202027.1\|342251_343268_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP014693.1\|WP_003202053.1\|329265_329733_-\|response-regulator	unknown	unknown	gnl\|CDD\|381103
NZ_CP014693.1\|WP_003202029.1\|340896_342240_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|236510
NZ_CP014693.1\|WP_043042168.1\|334061_334583_+\|SgcJ/EcaC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|227212
NZ_CP014693.1\|WP_003202050.1\|329729_332042_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274362
NZ_CP014693.1\|WP_003202040.1\|335383_336328_+\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP014693.1\|WP_003202034.1\|339695_340175_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_CP014693.1\|WP_043042170.1\|328336_329233_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_013693411.1\|332038_332707_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.0279e-67
NZ_CP014693.1\|WP_069970823.1\|336395_338819_+\|TonB-dependent-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	2.21552e-91
NZ_CP014693.1\|WP_069971599.1\|347420_349085_+\|AMP-binding-protein	gnl\|CDD\|341277	cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS). MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.	0
NZ_CP014693.1\|WP_081042449.1\|345682_347158_+\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.05128e-41
NZ_CP014693.1\|WP_038859627.1\|343589_344561_+\|NAD-dependent-epimerase	gnl\|CDD\|187563	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs. This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP014693.1\|WP_003202042.1\|334874_335384_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|171561	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional.	3.48631e-60
NZ_CP014693.1\|WP_003202031.1\|340211_340775_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.58645e-14
NZ_CP014693.1\|WP_003202020.1\|345339_345633_+\|lipid-A-disaccharide-synthase-N-terminal-domain-containing-protein	gnl\|CDD\|377870	pfam07578, LAB_N, Lipid A Biosynthesis N-terminal domain. This family is found at the N-terminus of a group of Chlamydial Lipid A biosynthesis proteins. It is also found by itself in a family of proteins of unknown function.	1.13126e-32
NZ_CP014693.1\|WP_013693410.1\|332703_333888_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.44067e-49
NZ_CP014693.1\|WP_003202015.1\|349101_349863_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187629	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs. HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	4.58789e-121
NZ_CP014693.1\|WP_003202022.1\|344594_345338_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	2.33495e-45
NZ_CP014693.1\|WP_003202027.1\|342251_343268_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.7898e-40
NZ_CP014693.1\|WP_003202053.1\|329265_329733_-\|response-regulator	gnl\|CDD\|381103	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins. Cyclic di-GMP phosphodiesterase response regulator RpfG, together with sensory/regulatory protein RpfC, constitute a two-component system implicated in sensing and responding to the diffusible signal factor (DSF) that is essential for cell-cell signaling. RpfC is a hybrid sensor/histidine kinase that phosphorylates and activates RpfG, which degrades cyclic di-GMP to GMP, leading to the activation of Clp, a global transcriptional regulator that regulates a large set of genes in the DSF pathway. RpfG contains a CheY-like receiver domain attached to a histidine-aspartic acid-glycine-tyrosine-proline (HD-GYP) cyclic di-GMP phosphodiesterase domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	7.45411e-48
NZ_CP014693.1\|WP_003202029.1\|340896_342240_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|236510	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase.	0
NZ_CP014693.1\|WP_043042168.1\|334061_334583_+\|SgcJ/EcaC-family-oxidoreductase	gnl\|CDD\|227212	COG4875, COG4875, Uncharacterized protein conserved in bacteria with a cystatin-like fold [Function unknown].	5.07923e-56
NZ_CP014693.1\|WP_003202050.1\|329729_332042_-\|PAS-domain-S-box-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	2.06407e-61
NZ_CP014693.1\|WP_003202040.1\|335383_336328_+\|FecR-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	2.83553e-58
NZ_CP014693.1\|WP_003202034.1\|339695_340175_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	1.11983e-95
NZ_CP014693.1\|WP_043042170.1\|328336_329233_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.15571e-34

>NZ_CP014693.1|WP_003202036.1|338855_339257_-|hypothetical-protein
MTASIPIRPPCPPGVCDCGRDALLQAPGSDLRILCLNRQEEKRLLERLENIQSLDELQRLQQRLYENLGIRLSVEPGYNEVRTMRGIAIEFQDQPGLCRKIRQSIPAAIRRGLEKRPEIAWRLLDAHDLFRDI
>NZ_CP014693.1|WP_069970823.1|336395_338819_+|TonB-dependent-receptor
MSAVAPLRLRPAFAGWRPLLNLSLMLSLSASPFFISSSLAEETDRRSYQVPAGSLGAALARFAGLAGVNLSVDPALVSGRNSAGLSGEFGVEEGFARLLSGSGLQLQAVGEQAYILTPAPEGGSLQLAPTSILGATTSTDSPAYAGGQVARRGSQGLLGSRDFMETPFSMTTYTSAAVKNQQARTLGDMIASDPSVRATNPAGGRFEQFTIRGFSLFNSDVAYNGLYGILPTYTIDMEMAERVDILKGPSQLINGISPRGSVGGGINVVPKRATDKPITSFTGSYASNNQLGGAVDVGRRFGEDDKFGIRFNGVKQAGDTEWDQQSVDREMAVLGLDFRGERLRLSTDIGHTERNTDAPQERVQVGANAQVPHASDVRDNYAQSWSKARTKDTFGTVNAEFDVNDSVMLYGGVGARKSEHDFLRHNVSVTNDAGDFTVQPRDFTRDENVRTATAGVRNWFHTGPVSHEVNLAASYFYMDFENGGARYANGRSNLYEPVQTPAPSNPTRQDDKVYTENRFSGVALSDTLGLFDDRLLLTLGARWQRVKVDDWTNNVKGDTAYDEEKVSPSGGILFKATDKLSLYANYMEGLSQGKIAPSTSVNEDEIFPPFISRQVEVGAKYDAGPFAVTAALFRIKQPAYATDATTRVFGPNGKRENTGVELSVFGEPLKGTRLLGGVMYIDSELTHTTNGTFDGNRAPATPKYNVNLGAEWDVPTVQGLTLTSRGIYSSSQYLDQSNTKEIDSWERFDVGARYAFKVDEKNVTLRANIENVADKRYWSSAGASDDSEAGLTLSTPRTYLLSATVDF
>NZ_CP014693.1|WP_003202040.1|335383_336328_+|FecR-domain-containing-protein
MRSTPSPEAREAARAAARWLTLMEFDGNAFDSAALQRWRDSSDHHEAAWQKAQRLRQRFAGVPASLGMATLDRPVLARREVLKRALGVAALVPTAWLLGRELPLEAWRADLHTATGEQRRWSLVDGSALQLNTDSAVDLDLKARRLVLVRGEMALRLAGSTPLSVQSPYGLITITRGEVCLHLGEGDCRVAVVSGSAQLQPLRGPLLSLEAGQQVNIQDSGAGPVKAFDVAQLGWRDGVLVAQDQPLGHFLRELSRYRPGVLRWDETLEALRITGSFRLDNTDRILTLLAASLPLDVHMRTRYWVTLTLRKNMA
>NZ_CP014693.1|WP_003202042.1|334874_335384_+|sigma-70-family-RNA-polymerase-sigma-factor
MCDAVTPTEHSLHALYRDHGSWLEGWLRRRMGNAWDAADLRQDTFLRVLSSSQTLADLQEPRAYLLTVGKRLLSNFYTRRNLEQAYLDALASLPEACAPSPEQRWLLLETLQALDELLDGLPPLVRRAFLWSQLEGLGYREIAERLQVSERTVKRYMAQAYEHCLLVDF
>NZ_CP014693.1|WP_043042168.1|334061_334583_+|SgcJ/EcaC-family-oxidoreductase
MKMKTCAIAALFLLAAPLVQALEATPYVYRTVAEQPKDVNDREIAALFDRWNAALQTGSATAVTGLYAPDAILQPTVSNKVRNTPAQIQDYFEHFLAGKPVGQINYREIRHLGPDAAMDSGVYTFTLTQADGSKREVQARYTFLYERLDGQWKIINHHSSAMPEVPKTLHASH
>NZ_CP014693.1|WP_013693410.1|332703_333888_-|sensor-histidine-kinase
MQSPPHDPGSALAIRSQYRQSQSRAARLGLLLGTGHELTQLPLSAMRQRALQRACAFMAMDHGLLLEWAPDQPLRTLASHGSAERLELLANLAQPQMPGPQWLESPGSALPQVLRVPLRASDGVEFGALLLGNSVALGAPDNEDIESLQLLATLLAAHLENSRLLEALQARERTMSELVHRLFSAQEDERKRVAYDLHDGLAQNLAGLHQRLQGFAGRCPSLPPALANELQSILDLAQGCVGEGRQLISGLRPHVLDDFGLYKAVDKEADRLRDAGLTVNWAEHSTARLPGNTEIALFRIAQEGINNILKHAQASHVQLGLAVDDGHACLRVEDDGRGFALEQPIETNGSCHLGLAAMQERAHLLDGHLSCCSQPGGGTRLLASVPLPAHGGQP
>NZ_CP014693.1|WP_013693411.1|332038_332707_-|response-regulator-transcription-factor
MNRPLRLLLADDHEVTRTGFISMLAGNPGFEVVGQARDGQEALDLCERLQPDIAILDIRMPVLNGLGAARILQQRQPGIKVVIFTMDDSPDHLEAAIGAGAVGYLLKDASRDEVLDALKRVAQGEEALNSSVSARLLRRMTERGANGATQVQALTARERQVLGLVAGGFSNREIGEKLGIAPGTAKAHVERVIGKLGAADRTQAAVRGVALGLVAQPAGQWP
>NZ_CP014693.1|WP_003202050.1|329729_332042_-|PAS-domain-S-box-protein
MRFLAARRWADLPLRGKALVVISLPLVVLLLSLVLIYITERQTARAEEDVRRVLLVQGDIQTVHTLLAEAAASVRGYLLTRREDFLPSYEQATPLIHAALQRLDHNIRDARMREHLKTITPLIADKLDGLLALRNGKRDDPEAITAILIENKQVLDVLREQISAMRIREDALLADRSAAASATRMRLLFATLLAAVCGLLGAIVAVLFLSKGIVARVQQVQGNAQRLALGQPLLPQPPEQDEIGQLGTRLVEAGQLLAERERALRDNEERLRLIIDGVKDYGIFALDAQGYVTTWNAGAERIKGYTEQEILGRHFSLFYLAEECPAHPEMALREATRDGHYMEEGWRCRKDGSRFWASVVITAQYDGTGALRGFSKITRDITDRRAAEIALRTAREEAESASRAKSEFLSRMSHELRTPLNAILGFAQLLDMDSTAGQRPQVSHILRAGQHLLALINEVLDIARIEAGRLPLNIEPIALSTVLHEALTLVSPMAADAGIHLAELPALPDDSGVLADRQRLVQVLLNLLSNAIKYNRPGGEVRIEVSVQAHQVSIAVNDTGHGIAPEQLDQLFKPFERLGADPQVEGTGLGLSLSKSLLEMMQGNLQVHSEPGHGCCFTLQLPGTQVVGAHLPPIAALAVTRSPVDYHGKVLCIEDNLSSLALIETLMQRRPGIQLLSSMQGQMGLDLARQHTPQLILLDVSLPDLEGLEVLRRLRQSPATAATPVLMITADASDLTHRALRDAGATAILTKPIHIQAFLGHLEHYLPEPA
>NZ_CP014693.1|WP_003202053.1|329265_329733_-|response-regulator
MNRDLRILIVDDQRPNLDLMEQLLAREGLHNVLSSTEPLRTLDLFNSFEPDLVILDLHMPAFDGFAVLEQLNRRIPANDYLPILVLTADATRDTRLRALALGARDFISKPLDALETMLRIWNLLETRALYKALRELIPSQQIELLRQHRPAAGPS
>NZ_CP014693.1|WP_043042170.1|328336_329233_-|AraC-family-transcriptional-regulator
MKVTERTSATGLQAHIRGERLATSDGVSAKEILVEIFVRERSEAHIVVPAVAEPLLVWVLSGEAIVEERVANEAWETNTVVTGDFFLTTSPVPYEMRWQVTSREPFVVMHLYLGLALLERAIAETGGSRAIQLREVSGGRDEALSALLEQIRAELTRRGETSALLIQGVAQCVAVHLARHYRDANADDMSGRNALPAFKLKRVIQLMEQHLAAPFSLGDLAQAIGMSEYHFSRLFKRATGRSPSQYFIQLRMARARQLLLETERSIIDIGLEVGYGSASHFSQIFRREVGVAPSHYRK
>NZ_CP014693.1|WP_003202034.1|339695_340175_-|nuclear-transport-factor-2-family-protein
MSASSEVRPPLPPFTRESAIEKVRLAEDGWNSRDPQKVSLAYTLDTQWRNRAEFAHNREEAKAFLTRKWAKELDYRLIKELWAFTDNRIAVRYAYEWHDDSGNWFRSYGNENWEFDDQGLMYNRYACINDMPIKESERKFRWPLGRRPDDHPGLSELGL
>NZ_CP014693.1|WP_003202031.1|340211_340775_-|TetR/AcrR-family-transcriptional-regulator
MNEITGNETRDIILDVAEKLIYKSGIAATGMDLLVKTAGVSRKSVYRYFANKDDLIVAALRRRDERWMHWFSTEVDKAPTPTARLLNLFTVLKGWFDSEGFRGCAFINTSGETGDPQDPVRLVAKLHKQKLLDYITRLCVEQGVQNPDALARQLLILIDGAITVALVMGDHSAADDAQDMLKMLLHA
>NZ_CP014693.1|WP_003202029.1|340896_342240_+|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MPSLFKRSLLPKLRSFALTADAVTILDGAAQFRRCLLEKIAQATQRIYIVALYLQQDEAGQEILDALHAAKAARPELDVVVVVDWLRAQRGLIGAKKQPGNSAWYQEQTRTHASEVPIYGVPVQTRELFGVLHLKGFVIDDCVLYSGASLNNVYLHKFDKYRYDRYHLLQNTALADSMHHLVQHGLVTSRAVHRLDLPNLPSTRSLRKDIGDLRSRLKYATYDTSVGSLDKSGLSVSPLLGVGKNNPLSRVIGELIASSRQQLTICTPYFNLPLAVTRELNRALARGVKIDIIVGDKTANDFYIPPSEPFKIIAALPYLYEISLRRFAKRHQRAIDSGQLNLHLWRDGDNTYHLKGMWIDERYTLLTGNNLNPRAFRLDLENALLLDDPKGELLAPRQAELEQIYRHTRRIERYLDLETLPDYPDAVARFLKRVSRVRIERLLYRIL
>NZ_CP014693.1|WP_003202027.1|342251_343268_+|AraC-family-transcriptional-regulator
MSKKDTISIQLVREALLQSCAPGAATDEVLNKVGIDPALLDDTQARVPAHAYARLWRLLARRLDDEFFGMDPRKLKSGSLAFLCQCAMAQPTLASGLTAGLGFLSLMLEHLPAQWMRQQSLAEIVLLEDDQEPRRAFTYFTYWMIVHGVACWLAGRRIPILSVELRCPAPDFCDDYRVMFSQNLRFDRPRTRMILAAECLDLPIRRNADELKRFLAQAPANILVKYRNPQSLASRIRHDLRQLPAEQWPETEALAQQLCVSASTLRRRLAEEGQTYQGLKDSVRKDLAITWLAEPSISFVEIASRLGFADASSFYKAFRKWSGSNPGHYRSLILNDPD
>NZ_CP014693.1|WP_038859627.1|343589_344561_+|NAD-dependent-epimerase
MKVLVTGVAGFIGFHTAKRLCSDGHQVIGIDNLNSYYSVELKQARLAQLTECRDFRFQLLDVADKQALLELFAEHAFDQVVHLAAQAGVRYSIDNPDVYAQSNLVGFLNILEACRAHRPAHLIFASSSSVYGLNDRLPYATTDPVDQPVSFYAATKRANELMAHAYSHLYGIPTTGLRFFTVYGPWGRPDMAPFKFTDAILNGRTIDVYNDGAMSRDFTYIDDIVEGLVRLIPLPPTDETGVRNKVYNIGFGSPVKLLQFIECIEEALGIRAIKNFLPLQSGDVVNTWADTRELEERVGFRPQVAVPVGVQSFVDWYRDYYAV
>NZ_CP014693.1|WP_003202022.1|344594_345338_+|glycosyltransferase-family-2-protein
MHETPYVSVLIPAKNEAGNLIPLLEEVRTALANENFEVIVVDDGSTDATAAELRTLQGSGYQQLRVLSHTRSLGQSTSIYHAAEVARGHWLATLDGDGQNDPADLPKMLDLVRGSEGTPAGVKLVAGHRVNRRDTASKRWASRFANKLRASLLKDQTPDTGCGIKLIEREAFLRLPYFDHMHRFIPALIRRHNGRMLVQPVNHRERGAGVSNYGNLDRALVGIVDLFGVWWLIKRTRLDVNAQETEV
>NZ_CP014693.1|WP_003202020.1|345339_345633_+|lipid-A-disaccharide-synthase-N-terminal-domain-containing-protein
MGRESLWLAVGFGGQLAFTGRFALQWLYSEYKKRSMIPVGFWYLSIIGSALLLAYAIYREDPVFIVGQSFGFIVYLRNLQLIAKHHEQENPELTKKG
>NZ_CP014693.1|WP_081042449.1|345682_347158_+|glycosyltransferase-family-39-protein
MVLALIIVGAGLGWRQPMNVDEERFLGVALEMLQNGSWFIPHRAGEIYADKPPLFMWTVALFVQLTHLPKVALYLPALLAGAVTTACLYDLGRRLWGRRVGVIAALLFLATYQTYSILRTGQIDGFLALWTILGIYGLCRHVLLGPAWRWYYVACAAMGFGIISKGVGFLPVLMLIPYAYALRKGWKGVVAMPGQAGRWWLGLVVALAAIALWLGPLLMIVAQGSADSLAYAQEILFKQTAGRYANAWEHREPFWYFFVQVIPKYWLPIVFMLPWLVPAWRRQLLKHDGRVLVLLGWVLLVLVFFSLSSGKRKLYIFPALPALILVVAPLVPWLLRRWFGARPRGRAVFNVLVALWLCAWFVRGFVEPHKEGINPHQTLMRDVAGMTANAELVLVGWREGHWLFAQQPIVHFGFYNGNSLEQSATWLRSHPQAFALVPARDLARCYDPQKARRVGNTSRAEWFLVGVDADNQRCQSPTPEKVYSFAWQQPL
>NZ_CP014693.1|WP_069971599.1|347420_349085_+|AMP-binding-protein
MRDYSSATSQFDYLHTVNTALHGSLEALNACVECCDRHALPGRIALFWEGRDGSDATWTYRDLQDNAARFANFLRAQGIGKGDKVAGLLPRTAELLIVVLATWRIGAVYQPLFTAFGPKAIEHRLGSSGARLVVTDAVNRPKLDEVAGCPTIVTVGGEKGQGIVRGDYSFWAEVANHSSQCEPLMLTGEDPFLLMFTSGTTGPAKALSVPLKAIVAFQNYTRDAVDLRPEDAFWNVADPGWAYGIYFGVTGPLAMGHPITFYDSPFTLESTCRVINKYGITNLTGSPTAYRLLIAGGEQFARSIKGKLRIVSSAGEPLNPEVIRWFADNLNVVIHDHYGQTELGMVLCNHHGLEHPVHLGAAGFASPGHRIVVLDENQRELGVGQPGILALDRSQSPMCWFAGYEGGPTKAFVGDYYLSGDTVELNPDGSISFVGRSDDVITTSGYRVGPFDVESALIEHAAVVEAAVIGKPDPERTELVKAFVVLSAQYRASAELAEELRQHVRKRLAAHAYPREIEFVSDLPKTPSGKLQRFILRNQEIAKAQEAAAQNVSA
>NZ_CP014693.1|WP_003202015.1|349101_349863_+|SDR-family-NAD(P)-dependent-oxidoreductase
MQIDNKIFLVSGGASGLGAATGEMLVKAGAKVMLVDLNADAVAAQAQKLGCQSVVADISNEAAAEAAVKATVDAFGGLNGLVNCAGIVRGEKILGKNGPHALASFSQVINVNLIGSFNLLRLAAAAIAETEADADGERGVIINTASVAAFDGQIGQAAYAASKGAIASLTLPAARELARFGIRVMTIAPGIFETPMMAGMTPEVRDSLAAGVPFPPRLGKPSEYAALVRHIIENSMLNGEVIRLDGALRMAAK

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Crispr_ID: NZ_CP014693_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_2

1767156-1767239

Orphan

Consensus_repeat	Method
CTGCTCCCACAGGGAATTTGCTGCCACAGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_2

>merge|NZ_CP014693|2|1767156-1767239|CRISPRCasFinder
TTGCTCCCACAGGGGCTCTGCTCCCACAGGGAATTTGCTGCCACAGGGGGACCTGCTCCCACAGGGAATTTGCTGCCACAGGGG

>NZ_CP014693|2|2|1767156-1767239|CRISPRCasFinder
TTGCTCCCACAGGGGCTCTGCTCCCACAGGGA	ATTTGCTGCCACAGGGGGAC
CTGCTCCCACAGGGAATTTGCTGCCACAGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_003199523.1\|1776381_1777206_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|377524
NZ_CP014693.1\|WP_003199521.1\|1777208_1777454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_027912681.1\|1773140_1773896_+\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|235711
NZ_CP014693.1\|WP_069971040.1\|1770412_1773130_+\|nitrate-reductase	unknown	unknown	gnl\|CDD\|239155
NZ_CP014693.1\|WP_003199553.1\|1752702_1753047_-\|YggL-family-protein	unknown	unknown	gnl\|CDD\|183281
NZ_CP014693.1\|WP_003199531.1\|1770095_1770413_+\|nitrite-reductase-small-subunit-NirD	unknown	unknown	gnl\|CDD\|239606
NZ_CP014693.1\|WP_003199517.1\|1778538_1779030_-\|ribonuclease-E-activity-regulator-RraA	unknown	unknown	gnl\|CDD\|236487
NZ_CP014693.1\|WP_003199548.1\|1754978_1757363_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP014693.1\|WP_053162182.1\|1764234_1765446_+\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_CP014693.1\|WP_003199525.1\|1774556_1775591_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|368587
NZ_CP014693.1\|WP_003199550.1\|1753278_1754745_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|224938
NZ_CP014693.1\|WP_003183614.1\|1775699_1776290_-\|RNA-polymerase-sigma-factor-SigX	unknown	unknown	gnl\|CDD\|236603
NZ_CP014693.1\|WP_069971039.1\|1767645_1770099_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224171
NZ_CP014693.1\|WP_003199543.1\|1760813_1761833_-\|quinone-dependent-dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
NZ_CP014693.1\|WP_003199519.1\|1777517_1778513_-\|zinc-transporter-ZntB	unknown	unknown	gnl\|CDD\|213367
NZ_CP014693.1\|WP_003223300.1\|1760308_1760524_+\|ribosome-modulation-factor	unknown	unknown	gnl\|CDD\|377425
NZ_CP014693.1\|WP_003199539.1\|1763291_1763867_+\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|226230
NZ_CP014693.1\|WP_028237694.1\|1762065_1763277_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|372585
NZ_CP014693.1\|WP_003199545.1\|1757506_1759777_-\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	unknown	unknown	gnl\|CDD\|236981
NZ_CP014693.1\|WP_003199535.1\|1765455_1767126_+\|bifunctional-protein-serine/threonine-kinase/phosphatase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_003199523.1\|1776381_1777206_-\|mechanosensitive-ion-channel	gnl\|CDD\|377524	pfam05552, TM_helix, Conserved TM helix. This alignment represents a conserved transmembrane helix as well as some flanking sequence. It is often found in association with pfam00924.	4.47334e-08
NZ_CP014693.1\|WP_027912681.1\|1773140_1773896_+\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|235711	PRK06136, PRK06136, uroporphyrinogen-III C-methyltransferase.	1.40367e-134
NZ_CP014693.1\|WP_069971040.1\|1770412_1773130_+\|nitrate-reductase	gnl\|CDD\|239155	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. Members of the MopB_Nitrate-R-NapA CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP014693.1\|WP_003199553.1\|1752702_1753047_-\|YggL-family-protein	gnl\|CDD\|183281	PRK11702, PRK11702, hypothetical protein; Provisional.	2.30531e-62
NZ_CP014693.1\|WP_003199531.1\|1770095_1770413_+\|nitrite-reductase-small-subunit-NirD	gnl\|CDD\|239606	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium.	2.04888e-55
NZ_CP014693.1\|WP_003199517.1\|1778538_1779030_-\|ribonuclease-E-activity-regulator-RraA	gnl\|CDD\|236487	PRK09372, PRK09372, ribonuclease E inhibitor RraA.	9.33748e-110
NZ_CP014693.1\|WP_003199548.1\|1754978_1757363_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	9.43192e-55
NZ_CP014693.1\|WP_053162182.1\|1764234_1765446_+\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	3.86218e-118
NZ_CP014693.1\|WP_003199525.1\|1774556_1775591_-\|OmpA-family-protein	gnl\|CDD\|368587	pfam05736, OprF, OprF membrane domain. This domain represents the presumed membrane spanning region of the OprF proteins. This region is involved in channel formation and is thought to form an 8-stranded beta-barrel.	1.71871e-99
NZ_CP014693.1\|WP_003199550.1\|1753278_1754745_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|224938	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].	1.46503e-122
NZ_CP014693.1\|WP_003183614.1\|1775699_1776290_-\|RNA-polymerase-sigma-factor-SigX	gnl\|CDD\|236603	PRK09640, PRK09640, RNA polymerase sigma factor SigX; Reviewed.	1.48508e-119
NZ_CP014693.1\|WP_069971039.1\|1767645_1770099_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224171	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion].	0
NZ_CP014693.1\|WP_003199543.1\|1760813_1761833_-\|quinone-dependent-dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	0
NZ_CP014693.1\|WP_003199519.1\|1777517_1778513_-\|zinc-transporter-ZntB	gnl\|CDD\|213367	cd12833, ZntB-like_1, Salmonella typhimurium Zn2+ transporter ZntB-like subgroup. A bacterial subgroup belonging to the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subgroup includes the Zn2+ transporter Salmonella typhimurium ZntB which mediates the efflux of Zn2+ (and Cd2+). Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, which occur in proteins belonging to this subfamily, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	8.22441e-116
NZ_CP014693.1\|WP_003223300.1\|1760308_1760524_+\|ribosome-modulation-factor	gnl\|CDD\|377425	pfam04957, RMF, Ribosome modulation factor. This protein associates with 70s ribosomes and converts them to a dimeric form (100S ribosomes) which appear during the transition from the exponential growth phase to the stationary phase of Escherichia coli cells.	6.49519e-24
NZ_CP014693.1\|WP_003199539.1\|1763291_1763867_+\|ANTAR-domain-containing-protein	gnl\|CDD\|226230	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms].	8.18913e-63
NZ_CP014693.1\|WP_028237694.1\|1762065_1763277_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|372585	pfam13379, NMT1_2, NMT1-like family. This family is closely related to the pfam09084 family.	7.28113e-123
NZ_CP014693.1\|WP_003199545.1\|1757506_1759777_-\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	gnl\|CDD\|236981	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL.	0
NZ_CP014693.1\|WP_003199535.1\|1765455_1767126_+\|bifunctional-protein-serine/threonine-kinase/phosphatase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.84724e-55

>NZ_CP014693.1|WP_003199535.1|1765455_1767126_+|bifunctional-protein-serine/threonine-kinase/phosphatase
MSLQLSFAEASAIGPREENQDALRLVTPAPALAASKGYLFAIADGVSQCADGGLAARSTLQALALDYYSTPQTWGVAQALDRLLLAQNRWLQANGGGQPLLTTVSALVLRGRRFTLAHVGDCRVYRWHADHLQRVSEDHVWEQQGMQHVLKRALGLDQHLILDFLDGELRTDETFVLLSDGVWAVLGDTAIAGILRDQPDLDLAAQTLVNAAHLAGSQDNASALLVRVDAVGEASIGDALIQLQQWPLPPALKPGQVFEGWQIESLLGHSQQSLLYRVRDGQGQPWLLKTLPVHLRDDSRAGQALLSEEWFLKRVAGRQFPEVHGVPQRQHLYYVMREYPGATLAELFNQGGPLPLAQWLDLAQRLVRAVGLLHRRQIYHRDIKPENLHLGDDGELRLLDFGLAYCPGLSEDQANVLPGTPSYIAPEAFGGTAPTAQQDLYAVGVTLYFLLTGHYPYGEIEAFQRPRFGVPVSASRYRPDLPEWLGQSLERAVAADPEQRFETAEEWLLLLEQGERRSLSVRPRPLLEREPLKVWRTLALVSLVVNLVLLFLVFHG
>NZ_CP014693.1|WP_053162182.1|1764234_1765446_+|NarK/NasA-family-nitrate-transporter
MNSSFWKSGHTPTLFAAFLYFDLSFMVWYLLGPLAVQISADLHLTTQQRGLMVATPILAGAVLRLFMGLLADRISPKTAGMVGQVIVISALFCAWKLGIHSYEQALLLGLFLGVAGASFAVALPLASQWYPPQHQGKAMGIAGAGNSGTVLAALIAPVMAVAFGWTNVFGFALIPLVLTLVLFAWLAKNAPERPKAKSMADYLKALGDRDSWWFMFFYSVTFGGFIGLASALPGYFNDQYGLSPVTAGYYTAACVFGGSLMRPLGGALADRFGGIRTLLGMYTVAAICIAAVGFNLPSSYAALALFVCTMLGLGAGNGAVFQLVPQRFRREIGVMTGLIGMAGGIGGFALAAGMGAIKQSTGSYQLALWLFASLGVLAWFGLHGVKRRWRTTWGSAAVTAARV
>NZ_CP014693.1|WP_003199539.1|1763291_1763867_+|ANTAR-domain-containing-protein
MLRILLINDTAKKVGRLKAALIEAGFEVIDESGLTIDLPARVETVRPDVILIDTESPGRDVMEQVVLVSRDQPRPIVMFTDEHDPNVMRQAIKSGVSAYIVEGIHAARLQPILDVAMARFESDQALRAQLLARDQQLAERKRIELAKGMLMKMKECNEEQAYTLMRRQAMSRQQKLIQVAEQIIAMNELLG
>NZ_CP014693.1|WP_028237694.1|1762065_1763277_+|ABC-transporter-substrate-binding-protein
MNEVPANPLAWVNGSDAPEKSAVNLGFMALSDCAPLVVAATQGFAQPYGLTLNLKRQASWANLRDKLVSGEIDAAHSLYGLIYAVHLGIGGVAASDMAVLMGLNQNGQSINLSHGLQAQGVTSPEALERHVHQTRPKLTFAQTFPTGTHAMWLYYWLAAQGIHPLSDVDSVVVPPPQMIAHLQAGRIDGFCVGEPWCASAVKQNLGFTLATTQTIWPDHPEKVLGCTRAFVEQYPNTARALVMAILEASRFIEQSSENRRSTAQLLTAPEYLDAPLDCIEPRLLGIYADGLGNSWQDPHAMRFHGNGEVNLPYLSDGMWFMTQFRRWGLLREDPDYLAVAQDVQQLKLYREACAALDIASPRQDMRSSQLIDGITWDGSDPAGYARSFKLHALSDAAPLLASR
>NZ_CP014693.1|WP_003199543.1|1760813_1761833_-|quinone-dependent-dihydroorotate-dehydrogenase
MYTLARELLFKLSPETSHDLSLDLIGAGGRLGLNGLLCKAPAKLPVTVMGLEFPNPVGLAAGLDKNGAAIDGFAQLGFGFVEIGTVTPRPQPGNPKPRLFRLPQAEAIINRMGFNNLGVDHLLARVAAAKYKGVLGINIGKNFDTPVERAVDDYLICLDKVYAHASYVTVNVSSPNTPGLRSLQFGDSLKQLLADLARRRAELALIHGRHVPLAIKIAPDMTDEETTQVAQALIETGMDAVIATNTTLGREGVEGLEHGDEAGGLSGAPVRDKSTHTVKVLAAELAGRLPIIAAGGITEGRHAAEKITAGASLVQIYSGFIYKGPALIRESVDAIAALG
>NZ_CP014693.1|WP_003223300.1|1760308_1760524_+|ribosome-modulation-factor
MRRLKRDPLERAFLRGYQYGVGGKSRELCPFTLPSVRQAWINGWREGRGDNWDGMTGTAGIHRLNELHAVG
>NZ_CP014693.1|WP_003199545.1|1757506_1759777_-|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL
MSDRFELFLTCPKGLEGLLIEEAVGLGLEEAREHTSAVRGMADMETAYRLCLWSRLANRVLLVLKRFPMKDAEDLYHGVLDVDWQDHMLADGTLAVEFSGHGSGIDNTHFGALKVKDAIVDKLRTPTGERPSIDKLNPDLRIHLRLDRGEAILSLDLSGHSLHQRGYRLQQGAAPLKENLAAAILIRAGWPRIAAEGGALADPMCGVGTFLVEAGMIAADMAPNLRRQQWGFTAWLGHVPALWKKLHEEASERAAAGLAKPPLWIRGYEADPRLIQPGRNNVERAGLSEWIKIYQGEVATFEPRPDQNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACLNWEAAVFTGAPDLGKRMGIRSHKQYSFWNGALPCKLLLIKVLPDQFVTGERRTPEQRQAEREQAVYDQAPEVPQERQYNKNGNPIKPAPAPAPVVEQARLSEGGQMFANRLQKNLKLLSKWAKREGVDCYRVYDADMPEYSMAIDLYHDWVHVQEYVAPKSIDPEKASARLFDALAAIPQALNVDKSRVVIKRRERQSGTKQYERQSAQGKFTEVNEGGVKLLVNLTDYLDTGLFLDHRPMRLRIQKEAAGKRFLNLFCYTATASVHAAKGGARSTTSVDLSKTYLDWARRNLSLNGFSDKNRLEQGDVMAWLEASRDEYDLIFIDPPTFSNSKRMEGVFDVQRDHVQLLDLAMARLAPGGVLYFSNNFRKFQLEDNLGERYAVEEITAKTIDPDFARNGKIHRAWKIMAR
>NZ_CP014693.1|WP_003199548.1|1754978_1757363_-|GGDEF-domain-containing-protein
MALHQVRPRILGFISEDVSAWLVASLVLLAGTVLTGLLTWAMMNLFNQQLRQRFELQAEERFSRIEEHFQDQEQRLDSLRRFFANSEGVSNTEFRGYADALLRRTRAFAWAPRVLRDERQSFEQHAQAEGATQFTIREADGDGGLRQASERDEYAPMLYIQSQASYGAPLGLDLLSEPLPRAALERARQRDGLVASQPLDLMGTDPVFARGVLLVAPVTRESASEPLGYVVAAISMRQLAGDGLPASSHDNLSMRVMDLSGENAEEALFESHNPPGRSDLSSTRLLRLADRDYRVELRPSRVFLATNHSSVTSMVILGGLLSLLLSALLYVLVSQRQRALKLVEQRTRELRAREQELRGTHGQLRGVLDAATQVAIIATDLRGVITTFNAGAEQMLGYPSCEVLQSMTLESLHVPRELQARAAQLGARFGKPIPACHAMLLEGGEQGGQQAREWTLVRRDGSHLTVNMLATPMLDDQGLWIGHLAICIDITERKRVYEALAARDLLLKKLSAHVPGGIYQFRMDFNGRFSVIYASDGIRDIYELEPDVLVQNAEAIFSRIHPLDSTRVRASIRASAHTLSPWREEYRVQLPLRGLRWVRGEATPEELPGGGVLWHGYISDISDLKRVEEELRALSVTDALTGIRNRRYFQDRLTSEMARVERGSGGLAVIMLDIDHFKRINDQHGHAVGDRVLQAVCQRVGQRLRRTDVFCRLGGEEFVVLCPDTDSESAYTLALELWEGLRAAPIEGVGFVTASFGIATWRIGEGADALLLRADSGVYAAKQAGRDRVEVQLG
>NZ_CP014693.1|WP_003199550.1|1753278_1754745_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MIKSLRPLLLASLLLPLALPVTSHAATINTALSPNVQKALKASKLQDDALSLVMVPLNGPGTPTLHNADVSVNPASTMKLVTTYAALEMLGPNHQWKTEFYTDGTLNGGILNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVQQVTGDLVLDRGFFIQPQLPEFNDDGNDENKPFLVKPDSLLVNLKALRFVARNDGGRVLVSVEPPIASIRIDNQVKAVNSKQCTGGVRYNPVAQTDGSVTVTVGGQLGDGCSSQTYLSLLDHATYTAGAVRAIWKELGGSIQGTDRLAATPSNAKVLARAFSPDLAEIIRDINKYSNNTMAQQLFLSLGAQFRNEADGDDAKAAQRVVRQWLAKKGITAPHLVMENGSGLSRAERVSAREMAAMLQAAWRSPYSAEFISSMPIAGTDGTMRKRLKTTAMAGEAHVKTGTLNTVRAIAGFSRDINGNTWAVVAILNDPKPWGASSVLDQVLLDLYRQPKLPQTASAL
>NZ_CP014693.1|WP_003199553.1|1752702_1753047_-|YggL-family-protein
MATNRSQRLRKKLCVDEFQELGFELNLDFKEDLADEAIDAFLDAFLKEAMEANGLGYVGGDDYGLVCLQKRGSVSEEQRAAVEAWLKARPELTSVEVSPLMDVWYPEKPINPVA
>NZ_CP014693.1|WP_069971039.1|1767645_1770099_+|NAD(P)/FAD-dependent-oxidoreductase
MKKLKLVMIGNGMAGVRTLEELLKLSNELYEITVFGAEPHTNYNRILLSPVLAGEQTFEEIVLNDLSWYLDNNIKLLLNRKVVEIDRVKRRVIAEDGSEAEYDRLLIATGSTPFILPIPGNTLEGVIGYRDIADTQAMINTAKTHKHAVVIGGGLLGLEAANGLKLRGMDVTVVHLGEWLLERQLDKTSGQLLQTALENRGLKFRLSEQTQALHDAGNGRVGSVQFKNGDIIPADLVVMAAGIRPNTELAEKSGIPCNRGILVNDTMQTYDPRIYAIGECASHRGTAYGLVAPLFEQAKVCANHLAQLGFATYKGSVTSTKLKVTGIDLFSAGDFMGGEGTETITLSDPIGGVYKKLVIKDDVLVGACLYGDTADGGWYFRQIRENHGISEIRDHLMFGENALGDVGHQGQDKAMSMADSAEVCGCNGVCKGTIVKAIQEHGLFSVDDVKKHTKAASSCGSCAGLVEQILINTVGGAADVKPKSEKAICGCSDLNHGQIRQAIRDQHLLTIAGAMSYLNWRTPNGCATCRPALNYYLISTWPGEAQDDPQSRLINERAHANIQKDGTYSVVPRMWGGVTNPSELRRIADVADKYNVPMVKVTGGQRIDLLGIKKQDLPGVWKDLDMPSGHAYGKSIRTVKTCVGSEFCRFGTQNSTQLGIELEHDLFNMWSPHKVKLAVSGCPRNCSEAGIKDVGIIGVDSGWEMYIGGNGGIKTEVAEFFVKLKTAEEVREYNGAFLQLYREEAFYLERTVHYMQRVGMEHIKKAVLEDPVRRKALHERLKFSLSLEQDPWKQRLEQPQLKKEFEVIPVKNLKVPA
>NZ_CP014693.1|WP_003199531.1|1770095_1770413_+|nitrite-reductase-small-subunit-NirD
MNWLDICALEDINILGSRIINGPKGDIAIFRTSDDEVFALDDRCPHKGGPLSQGLVYGKRVACPLHNWQIDLESGQAQAPDVGCAHHHSARVENGRVQLALRDAS
>NZ_CP014693.1|WP_069971040.1|1770412_1773130_+|nitrate-reductase
MNRQITASTCCYCGVGCGVLIEHDGERILGVSGDPAHPANFGKLCSKGSTLHLTGDLAARALYPELRLGKGLARARTDWDSALDHAVSVFAETITEHGPDSVAFYISGQLLTEDYYAFNKLARALVGTNNIDSNSRLCMSSAVVGYKRSLGADAPPCSYEDLELSDCVMIVGSNMAYAHPILFRRLEEAKSRRPQMKIIVIDPRRTDTCDLADLHLAILPGTDVALFHGILHLLLWEDWIDRDFIKAHTEGLAELKNLVRDYTPSMVAQLCGISVEQLHQCAEWVGTSPSFLSLWCMGLNQSTAGSAKNSALINLHLATGQIGRPGAGPFSLTGQPNAMGGRETGSLSNLLPGHREAANPEHRAEVAHYWGVEQLPATAGLSAIELFEQVRSGKIKALWIACTNPAQSMPDQTAVREALQACPFVVLQEAFRTTETAAFADLLLPAASWGEKEGSVTNSERRISHVRRAIGAPGEAQPDWAITVDFAQRLEKHLRPGQPSLFAFESPAQLFDEYKQLTRGRDLDLSGISHALIDQLGPQQWPFPDGATVGTARLYVDGIFPTDSGRARFVTDPYRAAKELRDARYPLTLNTGRLRDQWHGMSRTGTAAQLFGHVNEAVLSLHPDELQRHRLQAGDLVSLKSRRGSVIVAVDSDDSVRPGQAFLPMHWGDRFLKGGVNTLTQPAFDPLSKQPELKHSGVRLEPVNLPWQLFALIEGDVQQHLEALRPLCEAFSYVSLSLTGRERPALLIRAASAVAPEPQLLQAIDEQLGLIDGPVLAYDDPRRSIGKRVRIENGRITAIRLAGETLARHWLQNLWLEGRADEQLRRWLLAPLSAPPGNVGAATGGSKTLCNCMNVSQRAICAGIERGLDLQGLKQELGCGTQCGSCVPEIKRLLVATAQPLAAIS
>NZ_CP014693.1|WP_027912681.1|1773140_1773896_+|uroporphyrinogen-III-C-methyltransferase
MNAKVWLVGAGPGDPELLTLKAVRALGEADVVLIDDLVNAAVLEHCPDARIIAVGKRGGCRSTPQAFIHRLMLRYARQGKCVVRLKGGDPCIFGRGGEEAQWLREQGVEVEMVNGITAGLAGATQCDIPLTLRGIARGVTLVTAHTQDGSSLNWQALAQSGTTLVVYMGVAKLSEIREQLLAGGLAANTPVAMIENASLPHQRDCRSDLASMEADASTFQLKSPAILVIGAVAGAAELATSPSAWAQVSAL
>NZ_CP014693.1|WP_003199525.1|1774556_1775591_-|OmpA-family-protein
MKLKNTLGFAIGSLIAATSFGALAQGQGAVEIEGFAKKEQFDSARNFKNNGNLFGGSVGYFLTDDVELRLAYDEVHNARTDDGTNVKGANTALDALYHFNNPGDMLRPYVSAGFSDQSIDQNGSNGRNRSTFANVGGGAKLYFTENFYARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKPAAAPVPAPAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVADNATEAGRAVNRRVEAQVEAQAK
>NZ_CP014693.1|WP_003183614.1|1775699_1776290_-|RNA-polymerase-sigma-factor-SigX
MNKPQSLSTRYDPRDLSDEELVARAHTELFHVTRAYEELMRRYQRTLFNVCARYLGNDRDADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPLEEASEDKAPKPEEKGGLDRWLVYVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLREKFAGIAET
>NZ_CP014693.1|WP_003199523.1|1776381_1777206_-|mechanosensitive-ion-channel
MELDLWTQSLVTAMTALWTKVANFIPNLFGALVVLLLGFVVAKLLDTLLSKLLAKLGLDRLMGGTGLTKLLSRGGIQVPISTLVGKIVYWFVLLIFLVSAAESLGLERVSATLDMLALYLPKVFGAALVLLVGVLLAQLANGLVRGAAEGVGLDYAAGVGRIAQGLVIIISISVAISQLEVKTDLLNHVIVIVLITVGLAVALAMGLGSREIAGQILAGIYVRELYEVGQQVRVGEVEGQIEEIGTVKTTLLTEEGELVSLSNRILLEQHVSSR
>NZ_CP014693.1|WP_003199521.1|1777208_1777454_-|hypothetical-protein
MHDPFEQSLRDMLKASPSSRDDDACLGRVLKTANRQVGAGDLFSLLGRWLPALMIALNNGSAHLSPVSRRKPVTRTADKAD
>NZ_CP014693.1|WP_003199519.1|1777517_1778513_-|zinc-transporter-ZntB
MFEEENAQWGLVHALVLDGKGGARSIARTELDDLQLQAHESLWLHWDRSHPQTHTWLRKSSGLSEFNCDLLLEENTRPRLLPLPNAELLLFLRGINLNPGAEPEDMVSVRIFASAQRVISLRLRPLRATDELLAQLAEGKGPKTASELILYMAQYLTNKVQDLVTCLSEIVDTEEEKLDTDERYTPEHDAILHIRRRAAGLKRFLAPQRDIFGQMTRLKLPWFCDDDGDYWNELNNSLTRYLEELELTRERVGLVLEAEDRRLSVRMNRTMYRFGIVTGIFLPMSFLTGLLGINVGGIPFSASPYGFMVACLLMICVALGQWWLFRRLRWV
>NZ_CP014693.1|WP_003199517.1|1778538_1779030_-|ribonuclease-E-activity-regulator-RraA
MNHYLTPDLCDAYPELVQVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVELKGNGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVVYGCIRDVDIIAQTDLGVQALASHPMKTDRRGVGELNVPVTFAGVTFRPGEYVYADNNGVIVSPSPLKMPE

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Crispr_ID: NZ_CP014693_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_3

1774029-1774127

Orphan

Consensus_repeat	Method
CCAGGCCGGCTGTTAGGCCGCCTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_3

>merge|NZ_CP014693|3|1774029-1774127|CRISPRCasFinder
CCAGGCCGGCTGTTAGGCCGCCTCGCGAGCAAGCTTTGCTCCCACAGATCGGATGGGCGTACGACCGGGAGAACCAGACCGGCTGTTAGGCCGCCTCGC

>NZ_CP014693|3|3|1774029-1774127|CRISPRCasFinder
CCAGGCCGGCTGTTAGGCCGCCTCGC	GAGCAAGCTTTGCTCCCACAGATCGGATGGGCGTACGACCGGGAGAA
CCAGACCGGCTGTTAGGCCGCCTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_003199523.1\|1776381_1777206_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|377524
NZ_CP014693.1\|WP_003199521.1\|1777208_1777454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003199508.1\|1783871_1784099_-\|MbtH-family-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP014693.1\|WP_027912681.1\|1773140_1773896_+\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|235711
NZ_CP014693.1\|WP_069971040.1\|1770412_1773130_+\|nitrate-reductase	unknown	unknown	gnl\|CDD\|239155
NZ_CP014693.1\|WP_003199531.1\|1770095_1770413_+\|nitrite-reductase-small-subunit-NirD	unknown	unknown	gnl\|CDD\|239606
NZ_CP014693.1\|WP_003199517.1\|1778538_1779030_-\|ribonuclease-E-activity-regulator-RraA	unknown	unknown	gnl\|CDD\|236487
NZ_CP014693.1\|WP_053162182.1\|1764234_1765446_+\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_CP014693.1\|WP_003199513.1\|1780304_1782680_-\|phosphoenolpyruvate-synthase	unknown	unknown	gnl\|CDD\|235809
NZ_CP014693.1\|WP_003183614.1\|1775699_1776290_-\|RNA-polymerase-sigma-factor-SigX	unknown	unknown	gnl\|CDD\|236603
NZ_CP014693.1\|WP_003199525.1\|1774556_1775591_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|368587
NZ_CP014693.1\|WP_003199543.1\|1760813_1761833_-\|quinone-dependent-dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
NZ_CP014693.1\|WP_003199519.1\|1777517_1778513_-\|zinc-transporter-ZntB	unknown	unknown	gnl\|CDD\|213367
NZ_CP014693.1\|WP_003199539.1\|1763291_1763867_+\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|226230
NZ_CP014693.1\|WP_003223300.1\|1760308_1760524_+\|ribosome-modulation-factor	unknown	unknown	gnl\|CDD\|377425
NZ_CP014693.1\|WP_069971039.1\|1767645_1770099_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224171
NZ_CP014693.1\|WP_028237694.1\|1762065_1763277_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|372585
NZ_CP014693.1\|WP_003199516.1\|1779156_1780146_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP014693.1\|WP_003199535.1\|1765455_1767126_+\|bifunctional-protein-serine/threonine-kinase/phosphatase	unknown	unknown	gnl\|CDD\|270916
NZ_CP014693.1\|WP_003199510.1\|1782864_1783683_+\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|235419

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_003199523.1\|1776381_1777206_-\|mechanosensitive-ion-channel	gnl\|CDD\|377524	pfam05552, TM_helix, Conserved TM helix. This alignment represents a conserved transmembrane helix as well as some flanking sequence. It is often found in association with pfam00924.	4.47334e-08
NZ_CP014693.1\|WP_003199508.1\|1783871_1784099_-\|MbtH-family-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	1.2427e-32
NZ_CP014693.1\|WP_027912681.1\|1773140_1773896_+\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|235711	PRK06136, PRK06136, uroporphyrinogen-III C-methyltransferase.	1.40367e-134
NZ_CP014693.1\|WP_069971040.1\|1770412_1773130_+\|nitrate-reductase	gnl\|CDD\|239155	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. Members of the MopB_Nitrate-R-NapA CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP014693.1\|WP_003199531.1\|1770095_1770413_+\|nitrite-reductase-small-subunit-NirD	gnl\|CDD\|239606	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium.	2.04888e-55
NZ_CP014693.1\|WP_003199517.1\|1778538_1779030_-\|ribonuclease-E-activity-regulator-RraA	gnl\|CDD\|236487	PRK09372, PRK09372, ribonuclease E inhibitor RraA.	9.33748e-110
NZ_CP014693.1\|WP_053162182.1\|1764234_1765446_+\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	3.86218e-118
NZ_CP014693.1\|WP_003199513.1\|1780304_1782680_-\|phosphoenolpyruvate-synthase	gnl\|CDD\|235809	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated.	0
NZ_CP014693.1\|WP_003183614.1\|1775699_1776290_-\|RNA-polymerase-sigma-factor-SigX	gnl\|CDD\|236603	PRK09640, PRK09640, RNA polymerase sigma factor SigX; Reviewed.	1.48508e-119
NZ_CP014693.1\|WP_003199525.1\|1774556_1775591_-\|OmpA-family-protein	gnl\|CDD\|368587	pfam05736, OprF, OprF membrane domain. This domain represents the presumed membrane spanning region of the OprF proteins. This region is involved in channel formation and is thought to form an 8-stranded beta-barrel.	1.71871e-99
NZ_CP014693.1\|WP_003199543.1\|1760813_1761833_-\|quinone-dependent-dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	0
NZ_CP014693.1\|WP_003199519.1\|1777517_1778513_-\|zinc-transporter-ZntB	gnl\|CDD\|213367	cd12833, ZntB-like_1, Salmonella typhimurium Zn2+ transporter ZntB-like subgroup. A bacterial subgroup belonging to the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subgroup includes the Zn2+ transporter Salmonella typhimurium ZntB which mediates the efflux of Zn2+ (and Cd2+). Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, which occur in proteins belonging to this subfamily, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	8.22441e-116
NZ_CP014693.1\|WP_003199539.1\|1763291_1763867_+\|ANTAR-domain-containing-protein	gnl\|CDD\|226230	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms].	8.18913e-63
NZ_CP014693.1\|WP_003223300.1\|1760308_1760524_+\|ribosome-modulation-factor	gnl\|CDD\|377425	pfam04957, RMF, Ribosome modulation factor. This protein associates with 70s ribosomes and converts them to a dimeric form (100S ribosomes) which appear during the transition from the exponential growth phase to the stationary phase of Escherichia coli cells.	6.49519e-24
NZ_CP014693.1\|WP_069971039.1\|1767645_1770099_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224171	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion].	0
NZ_CP014693.1\|WP_028237694.1\|1762065_1763277_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|372585	pfam13379, NMT1_2, NMT1-like family. This family is closely related to the pfam09084 family.	7.28113e-123
NZ_CP014693.1\|WP_003199516.1\|1779156_1780146_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	3.47198e-14
NZ_CP014693.1\|WP_003199535.1\|1765455_1767126_+\|bifunctional-protein-serine/threonine-kinase/phosphatase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.84724e-55
NZ_CP014693.1\|WP_003199510.1\|1782864_1783683_+\|kinase/pyrophosphorylase	gnl\|CDD\|235419	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator.	1.83031e-131

>NZ_CP014693.1|WP_027912681.1|1773140_1773896_+|uroporphyrinogen-III-C-methyltransferase
MNAKVWLVGAGPGDPELLTLKAVRALGEADVVLIDDLVNAAVLEHCPDARIIAVGKRGGCRSTPQAFIHRLMLRYARQGKCVVRLKGGDPCIFGRGGEEAQWLREQGVEVEMVNGITAGLAGATQCDIPLTLRGIARGVTLVTAHTQDGSSLNWQALAQSGTTLVVYMGVAKLSEIREQLLAGGLAANTPVAMIENASLPHQRDCRSDLASMEADASTFQLKSPAILVIGAVAGAAELATSPSAWAQVSAL
>NZ_CP014693.1|WP_069971040.1|1770412_1773130_+|nitrate-reductase
MNRQITASTCCYCGVGCGVLIEHDGERILGVSGDPAHPANFGKLCSKGSTLHLTGDLAARALYPELRLGKGLARARTDWDSALDHAVSVFAETITEHGPDSVAFYISGQLLTEDYYAFNKLARALVGTNNIDSNSRLCMSSAVVGYKRSLGADAPPCSYEDLELSDCVMIVGSNMAYAHPILFRRLEEAKSRRPQMKIIVIDPRRTDTCDLADLHLAILPGTDVALFHGILHLLLWEDWIDRDFIKAHTEGLAELKNLVRDYTPSMVAQLCGISVEQLHQCAEWVGTSPSFLSLWCMGLNQSTAGSAKNSALINLHLATGQIGRPGAGPFSLTGQPNAMGGRETGSLSNLLPGHREAANPEHRAEVAHYWGVEQLPATAGLSAIELFEQVRSGKIKALWIACTNPAQSMPDQTAVREALQACPFVVLQEAFRTTETAAFADLLLPAASWGEKEGSVTNSERRISHVRRAIGAPGEAQPDWAITVDFAQRLEKHLRPGQPSLFAFESPAQLFDEYKQLTRGRDLDLSGISHALIDQLGPQQWPFPDGATVGTARLYVDGIFPTDSGRARFVTDPYRAAKELRDARYPLTLNTGRLRDQWHGMSRTGTAAQLFGHVNEAVLSLHPDELQRHRLQAGDLVSLKSRRGSVIVAVDSDDSVRPGQAFLPMHWGDRFLKGGVNTLTQPAFDPLSKQPELKHSGVRLEPVNLPWQLFALIEGDVQQHLEALRPLCEAFSYVSLSLTGRERPALLIRAASAVAPEPQLLQAIDEQLGLIDGPVLAYDDPRRSIGKRVRIENGRITAIRLAGETLARHWLQNLWLEGRADEQLRRWLLAPLSAPPGNVGAATGGSKTLCNCMNVSQRAICAGIERGLDLQGLKQELGCGTQCGSCVPEIKRLLVATAQPLAAIS
>NZ_CP014693.1|WP_003199531.1|1770095_1770413_+|nitrite-reductase-small-subunit-NirD
MNWLDICALEDINILGSRIINGPKGDIAIFRTSDDEVFALDDRCPHKGGPLSQGLVYGKRVACPLHNWQIDLESGQAQAPDVGCAHHHSARVENGRVQLALRDAS
>NZ_CP014693.1|WP_069971039.1|1767645_1770099_+|NAD(P)/FAD-dependent-oxidoreductase
MKKLKLVMIGNGMAGVRTLEELLKLSNELYEITVFGAEPHTNYNRILLSPVLAGEQTFEEIVLNDLSWYLDNNIKLLLNRKVVEIDRVKRRVIAEDGSEAEYDRLLIATGSTPFILPIPGNTLEGVIGYRDIADTQAMINTAKTHKHAVVIGGGLLGLEAANGLKLRGMDVTVVHLGEWLLERQLDKTSGQLLQTALENRGLKFRLSEQTQALHDAGNGRVGSVQFKNGDIIPADLVVMAAGIRPNTELAEKSGIPCNRGILVNDTMQTYDPRIYAIGECASHRGTAYGLVAPLFEQAKVCANHLAQLGFATYKGSVTSTKLKVTGIDLFSAGDFMGGEGTETITLSDPIGGVYKKLVIKDDVLVGACLYGDTADGGWYFRQIRENHGISEIRDHLMFGENALGDVGHQGQDKAMSMADSAEVCGCNGVCKGTIVKAIQEHGLFSVDDVKKHTKAASSCGSCAGLVEQILINTVGGAADVKPKSEKAICGCSDLNHGQIRQAIRDQHLLTIAGAMSYLNWRTPNGCATCRPALNYYLISTWPGEAQDDPQSRLINERAHANIQKDGTYSVVPRMWGGVTNPSELRRIADVADKYNVPMVKVTGGQRIDLLGIKKQDLPGVWKDLDMPSGHAYGKSIRTVKTCVGSEFCRFGTQNSTQLGIELEHDLFNMWSPHKVKLAVSGCPRNCSEAGIKDVGIIGVDSGWEMYIGGNGGIKTEVAEFFVKLKTAEEVREYNGAFLQLYREEAFYLERTVHYMQRVGMEHIKKAVLEDPVRRKALHERLKFSLSLEQDPWKQRLEQPQLKKEFEVIPVKNLKVPA
>NZ_CP014693.1|WP_003199535.1|1765455_1767126_+|bifunctional-protein-serine/threonine-kinase/phosphatase
MSLQLSFAEASAIGPREENQDALRLVTPAPALAASKGYLFAIADGVSQCADGGLAARSTLQALALDYYSTPQTWGVAQALDRLLLAQNRWLQANGGGQPLLTTVSALVLRGRRFTLAHVGDCRVYRWHADHLQRVSEDHVWEQQGMQHVLKRALGLDQHLILDFLDGELRTDETFVLLSDGVWAVLGDTAIAGILRDQPDLDLAAQTLVNAAHLAGSQDNASALLVRVDAVGEASIGDALIQLQQWPLPPALKPGQVFEGWQIESLLGHSQQSLLYRVRDGQGQPWLLKTLPVHLRDDSRAGQALLSEEWFLKRVAGRQFPEVHGVPQRQHLYYVMREYPGATLAELFNQGGPLPLAQWLDLAQRLVRAVGLLHRRQIYHRDIKPENLHLGDDGELRLLDFGLAYCPGLSEDQANVLPGTPSYIAPEAFGGTAPTAQQDLYAVGVTLYFLLTGHYPYGEIEAFQRPRFGVPVSASRYRPDLPEWLGQSLERAVAADPEQRFETAEEWLLLLEQGERRSLSVRPRPLLEREPLKVWRTLALVSLVVNLVLLFLVFHG
>NZ_CP014693.1|WP_053162182.1|1764234_1765446_+|NarK/NasA-family-nitrate-transporter
MNSSFWKSGHTPTLFAAFLYFDLSFMVWYLLGPLAVQISADLHLTTQQRGLMVATPILAGAVLRLFMGLLADRISPKTAGMVGQVIVISALFCAWKLGIHSYEQALLLGLFLGVAGASFAVALPLASQWYPPQHQGKAMGIAGAGNSGTVLAALIAPVMAVAFGWTNVFGFALIPLVLTLVLFAWLAKNAPERPKAKSMADYLKALGDRDSWWFMFFYSVTFGGFIGLASALPGYFNDQYGLSPVTAGYYTAACVFGGSLMRPLGGALADRFGGIRTLLGMYTVAAICIAAVGFNLPSSYAALALFVCTMLGLGAGNGAVFQLVPQRFRREIGVMTGLIGMAGGIGGFALAAGMGAIKQSTGSYQLALWLFASLGVLAWFGLHGVKRRWRTTWGSAAVTAARV
>NZ_CP014693.1|WP_003199539.1|1763291_1763867_+|ANTAR-domain-containing-protein
MLRILLINDTAKKVGRLKAALIEAGFEVIDESGLTIDLPARVETVRPDVILIDTESPGRDVMEQVVLVSRDQPRPIVMFTDEHDPNVMRQAIKSGVSAYIVEGIHAARLQPILDVAMARFESDQALRAQLLARDQQLAERKRIELAKGMLMKMKECNEEQAYTLMRRQAMSRQQKLIQVAEQIIAMNELLG
>NZ_CP014693.1|WP_028237694.1|1762065_1763277_+|ABC-transporter-substrate-binding-protein
MNEVPANPLAWVNGSDAPEKSAVNLGFMALSDCAPLVVAATQGFAQPYGLTLNLKRQASWANLRDKLVSGEIDAAHSLYGLIYAVHLGIGGVAASDMAVLMGLNQNGQSINLSHGLQAQGVTSPEALERHVHQTRPKLTFAQTFPTGTHAMWLYYWLAAQGIHPLSDVDSVVVPPPQMIAHLQAGRIDGFCVGEPWCASAVKQNLGFTLATTQTIWPDHPEKVLGCTRAFVEQYPNTARALVMAILEASRFIEQSSENRRSTAQLLTAPEYLDAPLDCIEPRLLGIYADGLGNSWQDPHAMRFHGNGEVNLPYLSDGMWFMTQFRRWGLLREDPDYLAVAQDVQQLKLYREACAALDIASPRQDMRSSQLIDGITWDGSDPAGYARSFKLHALSDAAPLLASR
>NZ_CP014693.1|WP_003199543.1|1760813_1761833_-|quinone-dependent-dihydroorotate-dehydrogenase
MYTLARELLFKLSPETSHDLSLDLIGAGGRLGLNGLLCKAPAKLPVTVMGLEFPNPVGLAAGLDKNGAAIDGFAQLGFGFVEIGTVTPRPQPGNPKPRLFRLPQAEAIINRMGFNNLGVDHLLARVAAAKYKGVLGINIGKNFDTPVERAVDDYLICLDKVYAHASYVTVNVSSPNTPGLRSLQFGDSLKQLLADLARRRAELALIHGRHVPLAIKIAPDMTDEETTQVAQALIETGMDAVIATNTTLGREGVEGLEHGDEAGGLSGAPVRDKSTHTVKVLAAELAGRLPIIAAGGITEGRHAAEKITAGASLVQIYSGFIYKGPALIRESVDAIAALG
>NZ_CP014693.1|WP_003223300.1|1760308_1760524_+|ribosome-modulation-factor
MRRLKRDPLERAFLRGYQYGVGGKSRELCPFTLPSVRQAWINGWREGRGDNWDGMTGTAGIHRLNELHAVG
>NZ_CP014693.1|WP_003199525.1|1774556_1775591_-|OmpA-family-protein
MKLKNTLGFAIGSLIAATSFGALAQGQGAVEIEGFAKKEQFDSARNFKNNGNLFGGSVGYFLTDDVELRLAYDEVHNARTDDGTNVKGANTALDALYHFNNPGDMLRPYVSAGFSDQSIDQNGSNGRNRSTFANVGGGAKLYFTENFYARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGSKPAAAPVPAPAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVADNATEAGRAVNRRVEAQVEAQAK
>NZ_CP014693.1|WP_003183614.1|1775699_1776290_-|RNA-polymerase-sigma-factor-SigX
MNKPQSLSTRYDPRDLSDEELVARAHTELFHVTRAYEELMRRYQRTLFNVCARYLGNDRDADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPLEEASEDKAPKPEEKGGLDRWLVYVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLREKFAGIAET
>NZ_CP014693.1|WP_003199523.1|1776381_1777206_-|mechanosensitive-ion-channel
MELDLWTQSLVTAMTALWTKVANFIPNLFGALVVLLLGFVVAKLLDTLLSKLLAKLGLDRLMGGTGLTKLLSRGGIQVPISTLVGKIVYWFVLLIFLVSAAESLGLERVSATLDMLALYLPKVFGAALVLLVGVLLAQLANGLVRGAAEGVGLDYAAGVGRIAQGLVIIISISVAISQLEVKTDLLNHVIVIVLITVGLAVALAMGLGSREIAGQILAGIYVRELYEVGQQVRVGEVEGQIEEIGTVKTTLLTEEGELVSLSNRILLEQHVSSR
>NZ_CP014693.1|WP_003199521.1|1777208_1777454_-|hypothetical-protein
MHDPFEQSLRDMLKASPSSRDDDACLGRVLKTANRQVGAGDLFSLLGRWLPALMIALNNGSAHLSPVSRRKPVTRTADKAD
>NZ_CP014693.1|WP_003199519.1|1777517_1778513_-|zinc-transporter-ZntB
MFEEENAQWGLVHALVLDGKGGARSIARTELDDLQLQAHESLWLHWDRSHPQTHTWLRKSSGLSEFNCDLLLEENTRPRLLPLPNAELLLFLRGINLNPGAEPEDMVSVRIFASAQRVISLRLRPLRATDELLAQLAEGKGPKTASELILYMAQYLTNKVQDLVTCLSEIVDTEEEKLDTDERYTPEHDAILHIRRRAAGLKRFLAPQRDIFGQMTRLKLPWFCDDDGDYWNELNNSLTRYLEELELTRERVGLVLEAEDRRLSVRMNRTMYRFGIVTGIFLPMSFLTGLLGINVGGIPFSASPYGFMVACLLMICVALGQWWLFRRLRWV
>NZ_CP014693.1|WP_003199517.1|1778538_1779030_-|ribonuclease-E-activity-regulator-RraA
MNHYLTPDLCDAYPELVQVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVELKGNGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVVYGCIRDVDIIAQTDLGVQALASHPMKTDRRGVGELNVPVTFAGVTFRPGEYVYADNNGVIVSPSPLKMPE
>NZ_CP014693.1|WP_003199516.1|1779156_1780146_-|alpha/beta-fold-hydrolase
MQSSSNLFPVALISAERRGDLSEDVYRLKPGNSPDASVELAVTRLGMADACETRGVPVILLHGSFSNRRFWYSPKGLGLGAYLARLGFDVWIPEMRGHGLSQRNQGYRNNRVADYARYDLPAIGAFVREQSGQVPHWIGHSLGGITLAAALGGHYLGEPAVASAAFFGTQVSRTYWPLKIPPVEWSGRFILKRFAQLSGSRLKRGPEDEPIGLALESMRWYGLFGRFGDAEKNWWAGLADVQLPVLAVSATGDHQDPTWACRKLFDQIGSEHKQFVCLGRGQGFTEDFGHVEMLVSKAAHLEVWPLVARWLKDQQAPLLAEQPQLAEAV
>NZ_CP014693.1|WP_003199513.1|1780304_1782680_-|phosphoenolpyruvate-synthase
MVEYVVSLDKLGVHDVEHVGGKNASLGEMISNLAGAGVSVPGGFATTAQAYRDFLELSGLNKQIHDALDALDVDDVNALAKTGAQIRQWIMEAEFPEKLNAEIRTAFAKLSEGNPDIAVAVRSSATAEDLPDASFAGQQETFLNIRGVENVIRAAKEVFASLFNDRAISYRVHQGFDHKLVALSAGVQRMVRSETGTAGVMFTLDTESGFRDVVFITGAYGLGETVVQGAVNPDEFYVHKGTLQAGRPAILRRNLGSKAIKMIYGDEAKAGRSVKTVDVDKAERARFCLSDAEVSELAKQAMIIEQHYKCPMDIEWAKDGDDGKLYIVQARPETVKSRTQANVMERYLLKETGTVLVEGRAIGQRIGAGKVRIIKDVSEMDKVQAGDVLVSDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKDGQGVTVSCAEGDTGYIFEGELGFDIKKNSVDAMPDLPFKIMMNVGNPDRAFDFAQLPNAGVGLARLEFIINRMIGVHPKALLNYDGLPQEIKDSVDKRIAGYNDPVGFYVEKLVEGISTLAAAFWPKKVIVRLSDFKSNEYANLIGGKLYEPEEENPMLGFRGASRYISEAFRDCFELECRALKRVRNEMGLTNVEIMVPFVRTLGEASQVVDLLAENGLARGENGLRVIMMCELPSNAILAEEFLEFFDGFSIGSNDLTQLTLGLDRDSGIIAHLFDERNPAVKKLLANAIAACNKAGKYIGICGQGPSDHPDLAKWLMEQGIESVSLNPDSVLETWFFLAEGQAAV
>NZ_CP014693.1|WP_003199510.1|1782864_1783683_+|kinase/pyrophosphorylase
MKRSAFFISDGTGITAETLGQSLLAQFENITFAKFIRPYIDSVDKARAMVQQINKAAETDGFRPIIFDTIVNQDIREILATSNGFMIDIFSTFLAPLEQELSEHSSYSVGKSHSIGHNSNYMERIEAVNFALDNDDGARTHYYDKADLILVGVSRCGKTPTCLYMAMQFGIRAANYPLTEDDMERLQLPSALRAHQHKLFGLTIDPDRLTAIRNERKPNSRYSSYAQCEFEVREVENLFRRENIPHINSTHFSVEEISAKILVEKGVERRFK
>NZ_CP014693.1|WP_003199508.1|1783871_1784099_-|MbtH-family-protein
MTSVFDREDIVFQVVVNHEEQYSIWPDYKVVPEGWRTVGKSGFKKECLAYIEEVWTDMRPLSLRKKMEEQAAVAH

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Crispr_ID: NZ_CP014693_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_4

2444194-2444288

Orphan

Consensus_repeat	Method
TCGCGAGCAAGCTCGCTCCCACAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_4

>merge|NZ_CP014693|4|2444194-2444288|CRISPRCasFinder
TCGCGAGCAAGCTCGCTCCCACAATTTGATCGGGTACAGCCGGAAAGACAGGCCGACTGTCAGGCCGCCTTCGCGAGCAGGCTCGCTCCCACAAT

>NZ_CP014693|4|4|2444194-2444288|CRISPRCasFinder
TCGCGAGCAAGCTCGCTCCCACAAT	TTGATCGGGTACAGCCGGAAAGACAGGCCGACTGTCAGGCCGCCT
TCGCGAGCAGGCTCGCTCCCACAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_003198276.1\|2455312_2456425_-\|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176260
NZ_CP014693.1\|WP_147282110.1\|2439194_2439608_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003198291.1\|2447544_2447868_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|378771
NZ_CP014693.1\|WP_003198305.1\|2439748_2440564_-\|lipid-II-degrading-bacteriocin	unknown	unknown	gnl\|CDD\|258996
NZ_CP014693.1\|WP_003198311.1\|2437156_2437339_-\|DUF2635-domain-containing-protein	unknown	unknown	gnl\|CDD\|378516
NZ_CP014693.1\|WP_003198302.1\|2440788_2441139_-\|pyocin-R2,-holin	unknown	unknown	gnl\|CDD\|318333
NZ_CP014693.1\|WP_170862085.1\|2451472_2452108_-\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NZ_CP014693.1\|WP_028237203.1\|2441205_2441787_-\|DUF642-domain-containing-protein	unknown	unknown	gnl\|CDD\|275156
NZ_CP014693.1\|WP_003198277.1\|2454458_2455304_-\|S-formylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|178061
NZ_CP014693.1\|WP_003198282.1\|2452149_2452899_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP014693.1\|WP_003198287.1\|2450415_2451261_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|236782
NZ_CP014693.1\|WP_003198289.1\|2449301_2450309_-\|RNA-polymerase-sigma-factor-RpoS	unknown	unknown	gnl\|CDD\|235548
NZ_CP014693.1\|WP_069971124.1\|2443727_2444081_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_039012729.1\|2442444_2443179_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP014693.1\|WP_080684706.1\|2440565_2440880_-\|Com-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|287133
NZ_CP014693.1\|WP_028237206.1\|2452886_2453945_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP014693.1\|WP_080684707.1\|2441825_2441984_-\|Com-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|287133
NZ_CP014693.1\|WP_003184863.1\|2453941_2454415_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|376811
NZ_CP014693.1\|WP_167331288.1\|2444834_2447402_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
NZ_CP014693.1\|WP_003198309.1\|2437335_2437920_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_003198276.1\|2455312_2456425_-\|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase	gnl\|CDD\|176260	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.	0
NZ_CP014693.1\|WP_003198291.1\|2447544_2447868_+\|ferredoxin-family-protein	gnl\|CDD\|378771	pfam11953, DUF3470, Domain of unknown function (DUF3470). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 50 amino acids in length. This domain is found associated with pfam00037. This domain has a single completely conserved residue N that may be functionally important.	2.99735e-22
NZ_CP014693.1\|WP_003198305.1\|2439748_2440564_-\|lipid-II-degrading-bacteriocin	gnl\|CDD\|258996	pfam14859, Colicin_M, Colicin M. Colicin M is a toxin produced by, and active against, Escherichia coli. It catalyzes the hydrolysis of lipid I and lipid II peptidoglycan intermediates, therefore inhibiting peptidoglycan biosynthesis and leading to lysis of the bacterial cells.	1.81322e-146
NZ_CP014693.1\|WP_003198311.1\|2437156_2437339_-\|DUF2635-domain-containing-protein	gnl\|CDD\|378516	pfam10948, DUF2635, Protein of unknown function (DUF2635). This is a family of phage proteins with unknown function.	3.67098e-14
NZ_CP014693.1\|WP_003198302.1\|2440788_2441139_-\|pyocin-R2,-holin	gnl\|CDD\|318333	pfam16085, Phage_holin_3_5, Bacteriophage holin Hol, superfamily III. Phage_holin_6_2 is a family of holins classified as 1.E.20 in the TC database. The hol gene (PRF9) product (117 aas) of Pseudomonas aeruginosa PAO1 exhibits a hydrophobicity profile similar to holins of P2 and phiCTX phages with two peaks of hydrophobicity that might correspond to either one or two TMSs. Hol functions in conjunction with the lytic enzyme, Lys, a glycosyl hydrolase that breaks-up the murein in the bacterial cell-wall, causing lysis of the cell and hence entry of phage particles. Several members are annotated as pyocin R2_PP when encoded on the chromosome.	7.22698e-52
NZ_CP014693.1\|WP_170862085.1\|2451472_2452108_-\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	2.74756e-116
NZ_CP014693.1\|WP_028237203.1\|2441205_2441787_-\|DUF642-domain-containing-protein	gnl\|CDD\|275156	TIGR04362, hypothetical_protein, choice-of-anchor C domain. This family describes an extracellular bacterial domain that occurs on a number of proteins with PEP-CTERM (exosortase recognition site) sequences at the C-terminus, as well some with an apparent alternate anchor sequence. Note that related pfam04862 (DUF642), as of release 26, is double the length of this model because it has two tandem regions homologous to this domain. pfam04862, in turn, belongs to a Pfam clan called the galactose-binding domain-like superfamily.	8.25769e-22
NZ_CP014693.1\|WP_003198282.1\|2452149_2452899_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	2.61749e-136
NZ_CP014693.1\|WP_003198287.1\|2450415_2451261_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|236782	PRK10871, nlpD, murein hydrolase activator NlpD.	1.25156e-74
NZ_CP014693.1\|WP_003198289.1\|2449301_2450309_-\|RNA-polymerase-sigma-factor-RpoS	gnl\|CDD\|235548	PRK05657, PRK05657, RNA polymerase sigma factor RpoS; Validated.	0
NZ_CP014693.1\|WP_003198277.1\|2454458_2455304_-\|S-formylglutathione-hydrolase	gnl\|CDD\|178061	PLN02442, PLN02442, S-formylglutathione hydrolase.	1.35995e-151
NZ_CP014693.1\|WP_039012729.1\|2442444_2443179_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	4.79846e-21
NZ_CP014693.1\|WP_080684706.1\|2440565_2440880_-\|Com-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|287133	pfam10122, Mu-like_Com, Mu-like prophage protein Com. Members of this family of proteins comprise the translational regulator of mom.	6.75298e-08
NZ_CP014693.1\|WP_080684707.1\|2441825_2441984_-\|Com-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|287133	pfam10122, Mu-like_Com, Mu-like prophage protein Com. Members of this family of proteins comprise the translational regulator of mom.	1.41033e-09
NZ_CP014693.1\|WP_003184863.1\|2453941_2454415_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|376811	pfam02542, YgbB, YgbB family. The ygbB protein is a putative enzyme of deoxy-xylulose pathway (terpenoid biosynthesis).	8.07104e-102
NZ_CP014693.1\|WP_167331288.1\|2444834_2447402_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NZ_CP014693.1\|WP_028237206.1\|2452886_2453945_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	1.60815e-163

>NZ_CP014693.1|WP_069971124.1|2443727_2444081_+|hypothetical-protein
MPKNTPNPPDDHISRSQSANAKKLDDAATRALDYYLKPKADKDTADTPDTLFIIAPNIDAECLLANLSETLASANAMVSDLAFDLKGSRRNILLGVQQMIELSQLLANRALDVVEPR
>NZ_CP014693.1|WP_039012729.1|2442444_2443179_-|helix-turn-helix-transcriptional-regulator
MQKRNVSTVLRALLDQHGISPTELHRRTGVPQSTLSRILSGKIVDPSDKHISKIAEYFAVSTDQLRGRADVVLVGNARRDEPHSELKDISLWDDETPVEEDEVSVPFLREVELAAGSGRFVIEESERSSLRFGKRSLRHNGVQFDQAKCVTVRGNSMLPVLRDGATVGVNAGKCGIGDIVDGDLYAINHNGQLRVKQLYRLPTGIRLRSFNRDEHPDEDYTFQEMQDEQIVILGHVFWWGMYAR
>NZ_CP014693.1|WP_080684707.1|2441825_2441984_-|Com-family-DNA-binding-transcriptional-regulator
MLKDFRCGHCKRLLARMGENTELQIKCSRCGALNHVKAVEPRVIARERDERC
>NZ_CP014693.1|WP_028237203.1|2441205_2441787_-|DUF642-domain-containing-protein
MNRFKKYVAPLLLSIALLGVGSKASAANLLLNGSFEQPGCSGSCILDTPAKANFITGWTTFLSGAEYFNMPASIGGSVAADGVVIVDLANYVYGNGGGIQQNFATAVGAKYRLTFSAGNSRYASRSGDGTIQVKVAGQSVTFNTPSAKGTAVEWSTITYDFTATSAQTTLAFSNEQNPYANFAFIDNVIVEPL
>NZ_CP014693.1|WP_003198302.1|2440788_2441139_-|pyocin-R2,-holin
MTNEQQALLDMPIWLVIVLALVGGVSGEMWRADKEGARGWSLLRRLALRSGACVVCGVSATMLLYALGMSIWSACALGCLTAMAGADVAIGLYERWVAKRLGVCEVPPRDVPPDQQ
>NZ_CP014693.1|WP_080684706.1|2440565_2440880_-|Com-family-DNA-binding-transcriptional-regulator
MWRSVFTSAGSPSGSAYAKCRRGTFLPTSSEAIPRTCVCFCRCLKIAYGKCNRLLVRVGEYAQLQIKCSRCGTLNHVKAASLKPSPLSDMKAEFSATNHSTQRN
>NZ_CP014693.1|WP_003198305.1|2439748_2440564_-|lipid-II-degrading-bacteriocin
MEFELPATYVYPDEYGTSRSTGFTVPSPGAIVNRMVQERSAAYARGDWAPMLERHLHAMHSNKPAYGLDGFIMGDLKVAHGADLLLLKNPKLSTADAWNQGIKEGSKIQNNAQLAVPTEFSGGTFTPFKAIQHWLLGNGNTASVQISRIGINPTPEKIPDLMAIINTARIGETTVNFNTSYYTGQDSVIPRIYLGTITLNITGKITRNTSGTVSFSGVVKAFSDRYDANASSHRTGFDEAATTALREVGRVANAKDYAIQINGELPISYAR
>NZ_CP014693.1|WP_147282110.1|2439194_2439608_-|hypothetical-protein
MKLGAAAIVFALMACVFLLFAIDGVPENPGNPSDTSGLPPVAMYVVILFSLVGVSSFLSCLGGVGLIVMRYKAYKLRLFIYALANLVFMLTAILGVLVSGAYTYDTFLGILGLIFYALTLVLLVLAAPKKQESIIRL
>NZ_CP014693.1|WP_003198309.1|2437335_2437920_-|hypothetical-protein
MKITPILTQLREQCPTLAHRVAAGFDLATLQAETPLQTPCAYVLPTADIASKNAAQNVTLQAVRDRFDAVLVLDATDATKALDLLHDLRAELWRALVGFKPGAEYTGVEYDGSELVSINSSRVLYRLRFFVEFQLGRNLASQPAESWHERELDGLSSFTGATVRVDAIDPADPNLKRPGPDGRVELTFSGDVTP
>NZ_CP014693.1|WP_003198311.1|2437156_2437339_-|DUF2635-domain-containing-protein
MSKRITVLPAPGRAVPDPEAGDLLPLEGREVPDNAWWRRRLADGDITTKAVKAAKPQGAK
>NZ_CP014693.1|WP_167331288.1|2444834_2447402_+|DNA-mismatch-repair-protein-MutS
MNDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGMAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERVNPVELLIPDDWPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGCLLAYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTAMGSRLLTRWLNRPLRDLTVLLARQSSITCLLDRYRFEQLQPQLKEIGDIERILARIGLRNARPRDLARLRDALGALPELQVAMTDLEAPHLQQLARTTSTYPELAALLEKAIIDNPPAVIRDGGVLKTGYDAELDELQALSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIELPSKQAEQAPADYVRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLISQLPPLQDTAGALAELDVLSNLAERALNLDLNCPRFVSEPCMRISQGRHPVVEQVLTTPFVANDLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAHLRAYTLFATHYFELTVLPESQPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSEVITRAREHLSRLETTSLPHEAPRPTKGKPAAPQQSDLFASLPHPVLDELAKLDLDDLTPRRALDLLYTLKTRI
>NZ_CP014693.1|WP_003198291.1|2447544_2447868_+|ferredoxin-family-protein
MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPANAIFSEDEVPAGMENFIELNAELADIWPNITEKKDALPDAEEWDGKEGKLKDLER
>NZ_CP014693.1|WP_003198289.1|2449301_2450309_-|RNA-polymerase-sigma-factor-RpoS
MALSKEVPEFDIDDEVLLMETGIAMDSMSNDEGATPPSVRAKSKHSASLKQHKYIDYTRALDATQLYLNEIGFSPLLSPEEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARELTQKLDHEPSPEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTLLDTLTDDRPTDPCELLQDDDLSQSIDQWLSELTDKQREVVIRRFGLRGHESSTLEDVGLEIGLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
>NZ_CP014693.1|WP_003198287.1|2450415_2451261_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MSLTVIAQRMGITSFQRLVTGLVLSTLLVGCSSTPSGNVRVVDRNNATPQRPTVTTGQYVVRRGDTLFSIAFRYGWDYKALAARNNIPAPYTIHPGQTIRFDGRSGSTPTAVVTQSGSTPSSSSKTTVIRRPTGAEAATVPSVASKPTPVPMPPAGPAPTGWGWPSSGVLIGKFSSNGSLNKGIDIAGDLGQPVLAASDGTVVYAGSGLRGYGELVIIKHSDTYVSAYGHNRRLLVREGQQVKVGQTIAEMGSTGTDRVKLHFEIRRQGKPVDPLQFLPRR
>NZ_CP014693.1|WP_170862085.1|2451472_2452108_-|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MTSQRTRERLIQRLYEEGLSNAQVLEVIRRTPRHLFVDEALAHRAYEDTALPIGHNQTISQPYMVARMSELLLEAGPLDKVMEIGTGSGYQTAVLSQLVERVFSVERIKVLQDRAKERLVELNLRNVVFRWGDGWEGWPALAPYNGIIVTAVATDVPQALLDQLAPGGRLVIPVGAGEVQQLMLIVREEHGFSRHVLGAVRFVPLLNGPLA
>NZ_CP014693.1|WP_003198282.1|2452149_2452899_-|5'/3'-nucleotidase-SurE
MRILISNDDGVTAPGLAALYAALADFAECVVIAPDQDKSGASSSLTLDRPLHPCYLDNGFISLNGTPTDCVHLGLNGLLEREPDMVVSGINLGANLGDDVLYSGTVAAALEGRFLEKPSFAFSFVSRQVDNLPTAAYFARKLVEAHGELELPPRTVLNVNIPNLPLDHIRGIQLTRLGHRARAAKPMHVVDPRGKAGYWIAAAGDAEDGGPGTDFHAVMQGYVSITPLQLDRTFNDAFRNLDGWLEGLR
>NZ_CP014693.1|WP_028237206.1|2452886_2453945_-|tRNA-pseudouridine(13)-synthase-TruD
MTELELLGPRAYGEPLGSAVLKATAEDFQVDEVLDIPLTGDGEHLWIWVEKRGLNTEEAARRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTARHRRKLQRGAHSANGFTLRLTQFKGDTAAIDARLQRIVRQGIPNYFGAQRFGHDGGNVVDARAWAVRKALPEQRNVRSRLLSTARSFLFNRVLAARVADGTWQKAQVGDLLAFTDSRSFFPAGEAECSDPRLAILDLHPTGPQWGEGPSPAAGATFELEQAIAAGEADLRDWLINAGMSHERRILRLPIGGLSWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
>NZ_CP014693.1|WP_003184863.1|2453941_2454415_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGYDVHRFAEGDFITLGGVRIAHGFGLLAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPQFKGADSRVLLRHVVSLIHAKGWKVGNVDNTIVAQAPKMAPHIEAMRQLIAEDLQVELDQVNVKATTTEKLGFVGREEGIAVHSVALLLRP
>NZ_CP014693.1|WP_003198277.1|2454458_2455304_-|S-formylglutathione-hydrolase
MSLENISCQKSFGGWHKRYRHRSDVLGCDMVFAVYLPPQAEQGGKLPVLYWLSGLTCTDENFMQKAGAQRMAAELGLIIVAPDTSPRGADVPGDPDGAWDFGLGAGFYLNATQDPWARHYRMHDYVVQELPTLVEAHFPASDKRGISGHSMGGHGALVCALRNPGRYRSVSAFSPINNPMDCPWGQKAFSRYLGEDRSKWREWDACALIAEAQEKLPLLVDQGDRDDFLANQLKPEALQQAAKAADHPLELRLQPGYDHSYFFIASFIDDHLQHHARALKA
>NZ_CP014693.1|WP_003198276.1|2455312_2456425_-|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase
MIKSRAAVAFEAKKPLEIVEVDVAMPKAGEVLLRVVASGVCHTDAYTLSGADPEGIFPSILGHEGGAIVEAIGEGVTSVAVGDHVIPLYTPECGQCKFCKSGKTNLCQAIRATQGKGLMPDGTSRFSYKGETIFHYMGTSTFSEYTVLPEISVAKIQKEAPLEKVCLLGCGVTTGIGAVLNTAKVKPGDTVAIFGLGGIGLSAVIGAVKAKASRIIAIDINPAKFEIAKQLGATDCVNPKDFDRPIQEVIVDMTDGGVDFSFECIGNVQLMRAALECCHKGWGESVIIGVAGAGQEIATRPFQLVTGRVWRGSAFGGVRGRSELPSYVAMAETGEIPLDTFITHTMGLEDINKAFDLMHEGKSIRTVIHF

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Crispr_ID: NZ_CP014693_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_5

2555794-2555926

Orphan

Consensus_repeat	Method
CAGGCCGGCTGTCGGGCCGCCTCGCGAGCAAGCTTTGCTCCCACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_5

>merge|NZ_CP014693|5|2555794-2555926|CRISPRCasFinder
CAGGCCGGCTGTCGGGCCGCCTCGCGAGCAAGCTTTGCTCCCACAGGTCCTGCTCAAACAGATCTGATGGGTGTACGACCGGGAGAACCAGGCCGGCTGTCAGGCCGCCTCGCGAGCAAGCTTTGCTCCCACA

>NZ_CP014693|5|5|2555794-2555926|CRISPRCasFinder
CAGGCCGGCTGTCGGGCCGCCTCGCGAGCAAGCTTTGCTCCCACA	GGTCCTGCTCAAACAGATCTGATGGGTGTACGACCGGGAGAAC
CAGGCCGGCTGTCAGGCCGCCTCGCGAGCAAGCTTTGCTCCCACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_003198122.1\|2545127_2545946_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP014693.1\|WP_013692360.1\|2556600_2557971_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270425
NZ_CP014693.1\|WP_069971132.1\|2551956_2553666_-\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
NZ_CP014693.1\|WP_013692359.1\|2558091_2559501_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_CP014693.1\|WP_170845966.1\|2563486_2564260_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP014693.1\|WP_069971133.1\|2554445_2555645_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|224717
NZ_CP014693.1\|WP_003198121.1\|2546093_2547518_+\|gamma-aminobutyraldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237391
NZ_CP014693.1\|WP_003198105.1\|2556128_2556416_-\|DUF3509-domain-containing-protein	unknown	unknown	gnl\|CDD\|338217
NZ_CP014693.1\|WP_069971131.1\|2548224_2548410_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003198095.1\|2561043_2561775_-\|DsbC-family-protein	unknown	unknown	gnl\|CDD\|182802
NZ_CP014693.1\|WP_003198112.1\|2550602_2551709_-\|NADH:flavin-oxidoreductase/NADH-oxidase	unknown	unknown	gnl\|CDD\|239242
NZ_CP014693.1\|WP_003198109.1\|2553755_2554298_-\|YaeQ-family-protein	unknown	unknown	gnl\|CDD\|377782
NZ_CP014693.1\|WP_003198093.1\|2562060_2562957_-\|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|234713
NZ_CP014693.1\|WP_003198098.1\|2559606_2560911_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NZ_CP014693.1\|WP_003198090.1\|2564241_2564778_-\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP014693.1\|WP_003198088.1\|2564783_2565035_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|234588
NZ_CP014693.1\|WP_013692362.1\|2548771_2550400_+\|glucan-biosynthesis-protein-D	unknown	unknown	gnl\|CDD\|237327
NZ_CP014693.1\|WP_003198117.1\|2547879_2548179_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP014693.1\|WP_003198119.1\|2547653_2547917_+\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl\|CDD\|226420
NZ_CP014693.1\|WP_003175895.1\|2563090_2563441_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_003198095.1\|2561043_2561775_-\|DsbC-family-protein	gnl\|CDD\|182802	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional.	6.33964e-67
NZ_CP014693.1\|WP_003198122.1\|2545127_2545946_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	7.31047e-77
NZ_CP014693.1\|WP_069971132.1\|2551956_2553666_-\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
NZ_CP014693.1\|WP_013692359.1\|2558091_2559501_-\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP014693.1\|WP_170845966.1\|2563486_2564260_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	7.91098e-159
NZ_CP014693.1\|WP_069971133.1\|2554445_2555645_+\|CoA-transferase	gnl\|CDD\|224717	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion].	1.83763e-154
NZ_CP014693.1\|WP_003198121.1\|2546093_2547518_+\|gamma-aminobutyraldehyde-dehydrogenase	gnl\|CDD\|237391	PRK13473, PRK13473, aminobutyraldehyde dehydrogenase.	0
NZ_CP014693.1\|WP_013692360.1\|2556600_2557971_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270425	cd13707, PBP2_BvgS_D2, The second of the two tandem periplasmic domains of sensor-kinase BvgS; the type 2 peripasmic-binding fold protein. This group contains the second domain of the periplasmic solute-binding domains of BvgS and related proteins. BvgS is composed of two periplasmic domains homologous to bacterial periplasmic-binding proteins (PBPs), a transmembrane region followed successively by a cytoplasmic PAS (Per/ARNT/SIM), a Histidine-kinase (HK), a receiver and a Histidine phosphotransfer (Hpt) domains. The sensor protein BvgS can autophosphorylate and phosphorylate the response regulator BvgA. The BvgAS phosphorelay controls the expression of virulence factors in response to certain environmental stimuli in Bordetella pertussis. Its close homologs, Escherichia coli EvgS and Klebsiella pneumoniae KvgS, appear to be involved in the transcriptional regulation of drug efflux pumps and in countering free radical stresses and sensing iron limiting conditions, respectively. The periplasmic sensor domain of BvgS belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.19015e-75
NZ_CP014693.1\|WP_003198105.1\|2556128_2556416_-\|DUF3509-domain-containing-protein	gnl\|CDD\|338217	pfam12021, DUF3509, Protein of unknown function (DUF3509). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 92 to 110 amino acids in length. This protein has two completely conserved residues (G and R) that may be functionally important.	4.41565e-29
NZ_CP014693.1\|WP_003198112.1\|2550602_2551709_-\|NADH:flavin-oxidoreductase/NADH-oxidase	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	0
NZ_CP014693.1\|WP_003198109.1\|2553755_2554298_-\|YaeQ-family-protein	gnl\|CDD\|377782	pfam07152, YaeQ, YaeQ protein. This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialized transcription elongation protein. YaeQ is known to compensate for loss of RfaH function.	3.19756e-85
NZ_CP014693.1\|WP_003198093.1\|2562060_2562957_-\|site-specific-tyrosine-recombinase-XerD	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	0
NZ_CP014693.1\|WP_003198098.1\|2559606_2560911_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
NZ_CP014693.1\|WP_003198090.1\|2564241_2564778_-\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.35564e-69
NZ_CP014693.1\|WP_003198088.1\|2564783_2565035_-\|30S-ribosomal-protein-S16	gnl\|CDD\|234588	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed.	3.96741e-42
NZ_CP014693.1\|WP_013692362.1\|2548771_2550400_+\|glucan-biosynthesis-protein-D	gnl\|CDD\|237327	PRK13273, mdoD, glucan biosynthesis protein D; Provisional.	0
NZ_CP014693.1\|WP_003198117.1\|2547879_2548179_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.83927e-11
NZ_CP014693.1\|WP_003198119.1\|2547653_2547917_+\|ribbon-helix-helix-protein,-CopG-family	gnl\|CDD\|226420	COG3905, COG3905, Predicted transcriptional regulator [Transcription].	3.1393e-09
NZ_CP014693.1\|WP_003175895.1\|2563090_2563441_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	8.6376e-70

>NZ_CP014693.1|WP_069971133.1|2554445_2555645_+|CoA-transferase
MSLTAKPLAGVKVIELGTLIAGPFASRICGEFGAEVIKVESPDGGDPLRKWRKLYEGTSLWWFVQARNKKSLTLNLKHPEGLAILKKLIGEADILIENFRPGVLEKLGLGWDVLHALNPKLVMVRLSGFGQTGPMKDQPGFGAVGESMGGLRYITGFEDRPPVRTGISIGDSIAALWGVIGALMALRHREINGGTGQVVDVALYEAIFAMMESMVPEFDVFGFIRERTGNIMPGITPSSIHTSADGKHVQIGANGDAIFKRFMQIIGRDDLANDPQLAXNDGRDSRRDELYGVIDRWVNSLPLDSVIDQLNQAGVPASRIFSAEDMFSDPQFLAREMFLQAKLPDGKAFKMPGIVPKLSDTPGTSEWVGPALGEHNAQVLGELGYDAQQIAKLRSDGAI
>NZ_CP014693.1|WP_003198109.1|2553755_2554298_-|YaeQ-family-protein
MAQPSTTYKFELNLTDLDRNVYENVKQTIARHPSETEERMTVRLLAYAFWYNELLAFGRGLSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGSLRVWEGKVIPAVKNLKNVNIAAVPQEVLETLAQDMPRVIKWDVMISEGTIFVTDDRGQHEVQLQWLLGERG
>NZ_CP014693.1|WP_069971132.1|2551956_2553666_-|single-stranded-DNA-specific-exonuclease-RecJ
MRIEPRQLPDTLPFLGDLPPLLTRLYAARGVHSEAELDKSLARLIPFQQLKGIDAAVDLLVTALEQRQRILIVGDFDADGATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEVALAREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGLELPEADAIVNPNQPGCEFPSKALAGVGVIFYVLMALRARLRSLGWYASTPQPNIGELLDLVALGSVADVVPLDANNRILVHQGLERIRAGRARPGIKAILEVAKRDASRITSTDLGFILGPRLNAAGRLDDMSLGIECLLTNDPALAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPQWHQGVIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVPGFHIRDALSVVAAQHPTLISKYGGHAMAAGLTLPEANFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHAGPWGQHFPEPMFHGLFQLVEQRVVGERHLKVILKSECGSVKLDGIAFGIDREIWPNPTVRWVELAYKLDLNEFRGQETVQLMIAHIEPR
>NZ_CP014693.1|WP_003198112.1|2550602_2551709_-|NADH:flavin-oxidoreductase/NADH-oxidase
MSLLLEPYTLRQLTLPNRIAVSPMCQYSSTDGLANDWHLVHLGSRAVGGAGLVFTEATAVTADGRITAQDLGLWNDEQIEPLQRITRFITAQGAVPGIQLAHAGRKASTWRPWLGKHGSVKPADGGWVPVGPSPIAFDPQHTPPVQLDEGQIADVIQAFVDSAKRALTAGFKVVEVHAAHGYLLHQFLSPLSNQRRDQYGGSFENRIRLVLQVTEAVRAVWPEELPVFVRVSATDWVEDGWNPDETVELARRFRALGVDLIDVSSGGTAANAEIPTGPGYQTRFAERVRKESEIATGTVGMITEPAQAEHILRTCQADIIFLARELLRDPYWALHADDDLGGRKATWPAQYQRATHRDQPIHESDLRD
>NZ_CP014693.1|WP_013692362.1|2548771_2550400_+|glucan-biosynthesis-protein-D
MHRRNLLKASMAFAAYTGLSASGLMAARAWAADQTADGEARPFDFNGLKDQARRLAESRYVDTKQVLPETLAQMSPLQFNAIQYDVNHSLWNDLDGRQLDAQFFHVGMGFKQPVRMYSVDPKTRMAREVHFRPELFNYQKTTVNTAQLKGDLGFAGFRVFKAPELDRHDIVSFLGASYFRAVDASGQYGLSARGLAIDTYAKKREEFPDFTKFWFETPEKNSTRFVVYALLDSPSATGAYRFDIDCQPTRVVMEIDAHINARTAIEQLGIAPMTSMFSCGTVERRMCDTIHPQIHDSDRLAMWRGNGEWVCRPLNNPATLQFNAFADKDPKGFGLVQTDHDFASYQDTVDWYSKRPSLWVEPTTAWGEGSVDLLEIPTTGETLDNIVAFWTPKKPVAAGDSLNYGYKLYWSALPPVSTDLAHVDATRSGMGGFIEGWAPGEHYPTVWARRFAVDFSGGGLDQLPPGTGIEPVVTCSHGEVKDFNVLVMDAIKGYRITFDWYPTDDSVEPVQMRLFIRTKDRTLSETWLYQYFPPAPDKRKYP
>NZ_CP014693.1|WP_069971131.1|2548224_2548410_-|hypothetical-protein
MTRIQGITEMLGIFPGLTNPRRTRRLSLEELRLVERYRELSENDRIAMRYLVDAMRSVSRF
>NZ_CP014693.1|WP_003198117.1|2547879_2548179_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MPSIVLTDKAQSDLDSIHEHYQSAIGAEGADDVISAILETLRQLQRFPGSGRPSVAPDIRELVLTRYPFVAPYRLKHGQLQVLRILHQRTERLQDWSVE
>NZ_CP014693.1|WP_003198119.1|2547653_2547917_+|ribbon-helix-helix-protein,-CopG-family
MASPVLSFRVEEGLAQQLDLLAAATDRDRQYHLKRALVRYVEAESWHLQAISEGIADADAGNLTDLDAVKAKWAKRAEHRTDRQSTE
>NZ_CP014693.1|WP_003198121.1|2546093_2547518_+|gamma-aminobutyraldehyde-dehydrogenase
MQTKLLINGHLVNGEGPGQAVFNPALGRVLVEINEASEAQVDAAVRAADTAFESWSQVPPKDRSLLLLKLADAIEAHGEELAKLESDNCGKPLSAALNDEIPAIADVFRFFAGASRCMSGSAGGEYLPGHTSMIRRDPVGVIASIAPWNYPLMMVAWKIAPALAAGNTVVLKPSEQTPLTALRLAELASEIFPAGVLNVIFGRGQTVGNPLVTHPKVRMVSLTGSIATGSNIISSTSDSVKRMHMELGGKAPVIIFDDADIDAAVEGIRTFGFYNAGQDCTAACRIYAQQGIYDQFVEKLGAAVGSIKYGPQTAPDTEMGPLITAQHRDRVAGFVERAIAQPHIRLITGGKAVDGNGFFFEPTVLADAQQDDEIVRREVFGPVVSVTPFLDEAQVLAWANDSDYGLASSVWTADIGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKRSGYGKDMSMYGLEDYTVVRHVMFKH
>NZ_CP014693.1|WP_003198122.1|2545127_2545946_+|ABC-transporter-permease
MHSDSQDRASWGLRIAAWGGLVFLHFPILIIFLYAFNTEDAAFSFPPKGLTLKWFSVAFARPDVLEAIKLSLQVAAIATLIAMVLGTLASAALYRRDFFGKQGISLMLILPIALPGIITGIALLATFKTLGIEPGMFTIIVGHATFCVVIVYNNVIARLRRTSHSLIEASMDLGADGWQTFRYIILPNLGSALLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLSRPRDVPVTNVVAMLVMMVTMLPILGAYYLTRGGESVAGSGGK
>NZ_CP014693.1|WP_003198105.1|2556128_2556416_-|DUF3509-domain-containing-protein
MESISLLLGEALSPYQVTLTPSGAKGECLVTLKNASGAIMVERVFNQAQLTDKRQLTDVVDGLHRDVLIAEGRLEPCVIAALRNLARDKVMVGAN
>NZ_CP014693.1|WP_013692360.1|2556600_2557971_-|transporter-substrate-binding-domain-containing-protein
MSFFSKGKPALGWVMGLALMYWAQGGDAAQLAAFETPPFNPGERLVLDAQELKWIKDNPRVIVATMQFPLYLFKDELGQWSGLNHDILQRITQMTGLEFVHRESFSPGELLTLLENSEADMTTLLAMNDERRDFLSFSHAFGGSGWVFVGRDGESILHSLEQLEGKVLALPARHALEAEIRRDYPAIKLRTTKTYGEARALVESREAYATIENETGVHLYPAGQLQVGRGLEGKWEPDYLAVRQDLTVLLGILNKALEAFPAKDMRALRSKWVAGITPVQAPSIWERVSRWGYWCVVVVVVFGLLSLLWNRRLQIQIDQRLKAEAILKDQLMLQRALMDAIPDPIFIRDLEGRLIMCNKSYEDQFATRFEKLRGTRLTDSAAFPPATAELLHGEVMEQLRTGQSRFVDRQLMFSSGLREIYHWSVPFYGADGQLRGILGGWTDAGRRWRRCDKLMA
>NZ_CP014693.1|WP_013692359.1|2558091_2559501_-|threonine-synthase
MRYISTRGQAPALNFEDVLLAGLATDGGLYVPENLPRFTQEEIASWAGLPYHELAFRVMRPFVTGSIPDADFKKILEETYGVFSHNAIAPLRQLNGNEWVMELFHGPTLAFKDFALQLLGRLLDYVLQKRGERVVIVGATSGDTGSAAIEGCKHCENVDIFILHPHNRVSEVQRRQMTTIFGDNIHNIAIEGNFDDCQEMVKASFADQSFLKGTRLVAVNSINWARIMAQIVYYFHAALQLGGPARSVSFSVPTGNFGDIFAGYLARNMGLPINQLIVATNRNDILHRFMSGNQYVKETLHATLSPSMDIMVSSNFERLLFDLHGRNGAAIAGLMDSFRQGGGFSVEPERWTEARKLFDSLAVDDEQTCETIAEVFEQSGELLDPHTAIGVRAARECRRSLDIPMVILGTAHPVKFPEAVEKAGVGKALELPAHLSDLFERDERCTVLPNDLKAVQAFVSQHGNRGKPL
>NZ_CP014693.1|WP_003198098.1|2559606_2560911_-|homoserine-dehydrogenase
MNPVKVGICGLGTVGGGTFNVLQRNAEEIARRAGRGIEVAQIAMRTPKPQFQTTGIAITNDVFEVATNPEIDIVIELVGGYTVARELVLKAIENGKHVVTANKALIAVHGNEIFAKAREKGVIVAFEAAVAGGIPVIKAIREGLSANRINWVAGIINGTGNFILTEMREKGRTFEDVLAEAQALGYAEADPTFDVEGIDAAHKLTILASIAFGIPLQFDKAYTEGITKLTTADVNYAEALGYRIKHLGVARSTANGIELRVHPTLIPADRLIANVNGVMNAVMVNGDASGSTLFYGAGAGMEPTASSVIADLVDVVRAMTSDPENRVPHLAFQPDSLSAHPILPIEACESSYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRVVEQRINDAIAALEALQGVVGPVVRIRVEHLN
>NZ_CP014693.1|WP_003198095.1|2561043_2561775_-|DsbC-family-protein
MRLIQMFTAAAIALASTFAIADDAADKAIRKSLENLQLEVPIETISASPMAGLYEIKLKGSRVLYASADGQYIVQGNLFELKDGKPVNLTEMTERQGISKLINGIPVAETVVYPAIGETKSHITVFTDTTCPYCHKLHAEVPELNKRGIEVRYVAFPRQGLGSPGDEQLQAVWCSKDKKAAMDKMVDGKEIKAAKCENPVSKQFALGQSIGVNGTPAIVLADGQVIPGYQPAPQVAKLALGAK
>NZ_CP014693.1|WP_003198093.1|2562060_2562957_-|site-specific-tyrosine-recombinase-XerD
MPAIDHPLIDQFLDALWLEKGLSDNTRDAYRSDLALFNGWLQENHLELINAGRELILDHLAWRLEQNYKPRSTARFLSGLRGFYRYLLREKLIAVDPTLRVEMPQLGRPLPKSLSEADVEALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDARHELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGINKSLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG
>NZ_CP014693.1|WP_003175895.1|2563090_2563441_-|50S-ribosomal-protein-L19
MTNKIILALEAEQMTKEIPTFAPGDTIVVQVKVKEGDRSRLQAFEGVVIAKRNRGVNSAFTVRKISNGVGVERTFQTYSPQIDSMAVKRRGDVRKAKLYYLRDLSGKAARIKEKLA
>NZ_CP014693.1|WP_170845966.1|2563486_2564260_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MGCGFLNVANLRVEVITLFPEMFSAISEYGITSRAVKQELLQLTCWNPRDYTTDRHHTVDDRPFGGGPGMVMKIKPLEDALVQARTAAGEGAKVIYLSPQGRQLTQSAVRELANSDALILIAGRYEGIDERFIEAHVDEEWSIGDYVLSGGELPAMVLIDAVTRLLPGALGHADSAEEDSFTDGLLDCPHYTRPEVYADQRVPDVLLSGNHAHIRRWRLQQSLGRTYERRADLLESRSLSGEEKKLLEEYIRERDDS
>NZ_CP014693.1|WP_003198090.1|2564241_2564778_-|ribosome-maturation-factor-RimM
MNATPKDADDLIVVGKIYSVHGVRGEVKVYSFTDPIKNLLDYKTWTLKREGSVKQVELVSGRGNDKFLVAKLKDLDDREEARLLAGYEICVPRNLFPELTDGEYYWYQLVGLKVIDHLGQLLGKIDHLLETGSNDVMVVKPCVGSLDDRERLLPYTEQCVLAVDLAAGEMKVEWDADF
>NZ_CP014693.1|WP_003198088.1|2564783_2565035_-|30S-ribosomal-protein-S16
MLTIRLALGGSKKRPFYHLTVTDSRNPRDGSHKEQVGFFNPVARGQEVRLSVNQERVAYWLSVGAQPSERVAQLLKESAKAAA

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Crispr_ID: NZ_CP014693_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_6

3136437-3136532

Orphan

Consensus_repeat	Method
ACAGCCGACCTGGCTCTCCCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_6

>merge|NZ_CP014693|6|3136437-3136532|CRISPRCasFinder
ACAGCCGACCTGGCTCTCCCGGTTGTACACCCGTCAGATCTGTGGGAGCAAAGCTTGCTCGCGAGGGGGCCTGACAGCCGACCTGGTTCTCCCGGT

>NZ_CP014693|6|6|3136437-3136532|CRISPRCasFinder
ACAGCCGACCTGGCTCTCCCGGT	TGTACACCCGTCAGATCTGTGGGAGCAAAGCTTGCTCGCGAGGGGGCCTG
ACAGCCGACCTGGTTCTCCCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_069971206.1\|3145631_3146912_-\|lipid-IV(A)-3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|235589
NZ_CP014693.1\|WP_003197180.1\|3131935_3132457_-\|TIGR02281-family-clan-AA-aspartic-protease	unknown	unknown	gnl\|CDD\|226106
NZ_CP014693.1\|WP_003197169.1\|3138797_3139415_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|182682
NZ_CP014693.1\|WP_003197174.1\|3136586_3136946_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003197177.1\|3133439_3135344_-\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|235501
NZ_CP014693.1\|WP_003197187.1\|3127021_3128539_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226249
NZ_CP014693.1\|WP_069971204.1\|3137439_3138255_-\|3',5'-cyclic-AMP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182997
NZ_CP014693.1\|WP_003197179.1\|3132453_3133440_-\|esterase-like-activity-of-phytase-family-protein	unknown	unknown	gnl\|CDD\|379191
NZ_CP014693.1\|WP_043041918.1\|3125673_3126888_-\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP014693.1\|WP_003197192.1\|3122693_3123554_+\|phosphatidylserine-decarboxylase	unknown	unknown	gnl\|CDD\|234591
NZ_CP014693.1\|WP_003197166.1\|3139629_3140376_+\|DUF3298-domain-containing-protein	unknown	unknown	gnl\|CDD\|378702
NZ_CP014693.1\|WP_003197154.1\|3146934_3147825_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP014693.1\|WP_003197182.1\|3129660_3131925_-\|DNA-topoisomerase-IV-subunit-A	unknown	unknown	gnl\|CDD\|235503
NZ_CP014693.1\|WP_003197157.1\|3144153_3145593_+\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP014693.1\|WP_003186471.1\|3138354_3138807_-\|DUF1249-domain-containing-protein	unknown	unknown	gnl\|CDD\|225693
NZ_CP014693.1\|WP_003197185.1\|3128776_3129481_-\|membrane-integrity-associated-transporter-subunit-PqiC	unknown	unknown	gnl\|CDD\|377153
NZ_CP014693.1\|WP_003197160.1\|3141808_3143698_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP014693.1\|WP_033028051.1\|3123751_3125512_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_069971205.1\|3140344_3141637_-\|putative-hydroxymethylpyrimidine-transporter-CytX	unknown	unknown	gnl\|CDD\|274096
NZ_CP014693.1\|WP_003197175.1\|3135386_3135995_-\|esterase	unknown	unknown	gnl\|CDD\|225692

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_069971206.1\|3145631_3146912_-\|lipid-IV(A)-3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	0
NZ_CP014693.1\|WP_003197180.1\|3131935_3132457_-\|TIGR02281-family-clan-AA-aspartic-protease	gnl\|CDD\|226106	COG3577, COG3577, Predicted aspartyl protease [General function prediction only].	2.94893e-47
NZ_CP014693.1\|WP_003197169.1\|3138797_3139415_-\|NUDIX-domain-containing-protein	gnl\|CDD\|182682	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional.	6.53901e-77
NZ_CP014693.1\|WP_003197177.1\|3133439_3135344_-\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|235501	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed.	0
NZ_CP014693.1\|WP_003197187.1\|3127021_3128539_+\|HAMP-domain-containing-protein	gnl\|CDD\|226249	COG3726, AhpA, Uncharacterized membrane protein affecting hemolysin expression [General function prediction only].	1.59965e-45
NZ_CP014693.1\|WP_069971204.1\|3137439_3138255_-\|3',5'-cyclic-AMP-phosphodiesterase	gnl\|CDD\|182997	PRK11148, PRK11148, cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional.	1.16055e-101
NZ_CP014693.1\|WP_003197179.1\|3132453_3133440_-\|esterase-like-activity-of-phytase-family-protein	gnl\|CDD\|379191	pfam13449, Phytase-like, Esterase-like activity of phytase. This is a repeated domain that carries several highly conserved Glu and Asp residues indicating the likelihood that the domain incorporates the enzymic activity of the PLC-like phospho-diesterase part of the proteins.	3.96574e-08
NZ_CP014693.1\|WP_043041918.1\|3125673_3126888_-\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.87443e-102
NZ_CP014693.1\|WP_003197192.1\|3122693_3123554_+\|phosphatidylserine-decarboxylase	gnl\|CDD\|234591	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed.	0
NZ_CP014693.1\|WP_003197166.1\|3139629_3140376_+\|DUF3298-domain-containing-protein	gnl\|CDD\|378702	pfam11738, DUF3298, Protein of unknown function (DUF3298). This family of bacterial protein C-terminal regions is highly conserved but the function is not known. Several members are annotated as being endo-1,4-beta-xylanase-like, but this could not be confirmed, and the structure can be defined as a heat-shock cognate 70kd protein 44kd ATPase.	0.000107647
NZ_CP014693.1\|WP_003197154.1\|3146934_3147825_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.19106e-39
NZ_CP014693.1\|WP_003197182.1\|3129660_3131925_-\|DNA-topoisomerase-IV-subunit-A	gnl\|CDD\|235503	PRK05561, PRK05561, DNA topoisomerase 4 subunit A.	0
NZ_CP014693.1\|WP_003197157.1\|3144153_3145593_+\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	3.57652e-113
NZ_CP014693.1\|WP_003197185.1\|3128776_3129481_-\|membrane-integrity-associated-transporter-subunit-PqiC	gnl\|CDD\|377153	pfam03886, ABC_trans_aux, ABC-type transport auxiliary lipoprotein component. ABC_trans_aux is a family of bacterial proteins that act as auxiliarires to the ABC-transporter in the gamma-hexachlorocyclohexane uptake permease system in Sphingobium japonicum. Gamma-hexachlorocyclohexane, or Lindane, can be used as the sole source of carbon in S.japonicum in aerobic conditions. Lindane is an insecticide.	2.09466e-31
NZ_CP014693.1\|WP_003186471.1\|3138354_3138807_-\|DUF1249-domain-containing-protein	gnl\|CDD\|225693	COG3151, COG3151, Uncharacterized protein conserved in bacteria [Function unknown].	9.0213e-52
NZ_CP014693.1\|WP_003197160.1\|3141808_3143698_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP014693.1\|WP_069971205.1\|3140344_3141637_-\|putative-hydroxymethylpyrimidine-transporter-CytX	gnl\|CDD\|274096	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX. On the basis of a phylogenomic study of thiamine biosythetic, salvage, and transporter genes and a highly conserved RNA element THI, this protein family has been identified as a probable transporter of hydroxymethylpyrimidine (HMP), the phosphorylated (by ThiD) form of which gets joined (by ThiE) to hydroxyethylthiazole phosphate to make thiamine phosphate. [Transport and binding proteins, Nucleosides, purines and pyrimidines, Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	1.05816e-113
NZ_CP014693.1\|WP_003197175.1\|3135386_3135995_-\|esterase	gnl\|CDD\|225692	COG3150, COG3150, Predicted esterase [General function prediction only].	7.04902e-74

>NZ_CP014693.1|WP_003197175.1|3135386_3135995_-|esterase
MSGSILYIHGFNSAPASTKACQLTEVMARLGLSDQLQVPALHHHPRQAIGQLEQAITELGRPLLVGSSLGGYYATHLAERHGLKALLVNPAVSPHRMFDGYLGTQKNLYTDETWELTHDHVTALAELQVPAPRDPQRFQVWLQTGDETLDYRHAQQYYRACALRIQAGGDHSFQGFAQQLPALLSFAGIGADLYQAIDFTSL
>NZ_CP014693.1|WP_003197177.1|3133439_3135344_-|DNA-topoisomerase-IV-subunit-B
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQVILHADHSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALSTQVRVRVKRDGNEYQMTFADGYKATELEVVGTVGKRNTGTSVYFAPDPKYFDSPKFSVSRLKHVLKAKAVLCPGLLVSFEDKATGEKVEWHYEDGLRSYLVDAVNDFERLPNEPFCGSLAGNKEAVDWALLWLPEGGESVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNANPETGLALAELAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFLVEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAADMSQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIYYALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDFEATSEMMDMLLAKKRAGDRKSWLESKGDLAEVLA
>NZ_CP014693.1|WP_003197179.1|3132453_3133440_-|esterase-like-activity-of-phytase-family-protein
MRNGFALALLLWAGVVVAGPAPELKLLSEHAVDGMRGGNLSGLALCGSEMWTVSDRDDDRIYRLAPSESSLWQAEVVEIEVPAVPDSGLPWGLKSRTWAASFLRGGELDFEGISCDSAGNRYVVSESQAAVLQVPPAGPASWLKIAPTMIRQARASGMLLHFNALFEGLAVNPAGDQLWLAAERERRGLLLIKRQQTVWDCDGNCVLLSEAGLEMQPAQFPKAKAVSRDFADLSLFNGKLFTLERNAFQICRRDPQTAQVERCWSFAAEALQDGRRYSQDYGLAEALVVDTEGAWIGLDNNDGARADGETRPIIWRFAAPDGGWGASP
>NZ_CP014693.1|WP_003197180.1|3131935_3132457_-|TIGR02281-family-clan-AA-aspartic-protease
MSQSPPGRRAGRVLMILAWCAALFLATRFFAQWEQRQQNPNAQVYSQRGEGFIEVKLVGNRQGHFVASGQINGQPVDFMLDTGATDVAIPVELAERLKLEKGFGVTLSTANGLSEGYRTRIDRLQLGDIVLRDVRALVAPGLGGTQVLLGMSALNKLEFTQRDGTMLLRQTTN
>NZ_CP014693.1|WP_003197182.1|3129660_3131925_-|DNA-topoisomerase-IV-subunit-A
MSDILADSLDGVERRSLADFTENAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELGLDADSKHKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRYSEVLLSELGQGTADWGPNFDGTLDEPLVLPARLPNILLNGTTGIAVGMATDVPPHNLREVATACVRLLDEPKATVEQLCEHIQGPDYPTEAEIITPRADLLKIYETGRGSVRMRAVYHVEDGDIIVTALPHQVSGAKVLEQIAAMMQAKPSKAPQVADLRDESDHENPCRIVIIPVNSRVDHDALMQHLFASTDLESSYRVNINIIGLDGKPQLKNLRALLVEWLEFRVKTVRRRLQFRLDKVERRLHLLDGLLIAYLNLDEVIHIIRTEEHPKASLIARFALSEIQADYILDTRLRQLARLEEMKLRAEQDELLKEQAKLQALLGSEAKLKKLVRTELLKDAETYGDDRRSPIVERAEAKALSEHDLLPNEKVTVVLSEKGWVRSAKGHDIDATGLSYKAGDGFKALAAGRSNQFAVFVDSTGRSYSVPAHTLPSARGQGEPLTGRLTPPPGATFECVLMPDDDGLYVIASDAGYGFVVKGEDLQAKNKAGKALLSLPNNAKVIAPRPVADRESNWLASVTTEGRLLVFKISDLPQLGKGKGNKIIGISGERVASREEYVTDIAVLPEGATLVLQAGKRTLSLKADDLEHYKGERGRRGNKLPRGFQRVDALLVENLN
>NZ_CP014693.1|WP_003197185.1|3128776_3129481_-|membrane-integrity-associated-transporter-subunit-PqiC
MTALRLPILWLAGLLGLAGCSMNQPVSLYQLDSGTPAQPAQSTGMAVLLGPVLIADYLQRETLLQRQPDGSLQAATDGRWAGSLSSDIDQLLLRQVAGHLDSQRVVLAPATQGFTPDVQVLLSITRLDSGKAQPAVLDAQWRLIDRRGKVRENRIVHLQEQHAGTTAAQVQAQGVLLQRLAEQLSVSLKPLANQPPVAEVPRKAAPAPAKPVEKDKDKIPMALPIRTDMEVFRF
>NZ_CP014693.1|WP_003197187.1|3127021_3128539_+|HAMP-domain-containing-protein
MNRPTPVKTDNFFLLIFRALRHRRVPIALRIASHNVILVALALVIYACVMGLQFKQAMHEQADALGESLTTQTATSATELLVSNDILSLNVLLNNLTKNKLVAHAAIYSVDNRILAEAGQRPKPGLLGESGGMYQSKITFQDVTAGQLRISLDMDQFQQPMTISLQSMGILSAILLALALALSLRLGRHISTPLLQLRVWLRDIDEHTPATQRQDEIGDLARQLHASFAPEPEPVPEPEDIDYVDDDDAEPGFEVRNLRDPGFDESQPMPASKPAPRHVVRTVEDDEDDDAFADLRDESVDGTPQPVARPVASNLPQHSAVLAVQLGAQDQLRRLPQARLKELLERYRDCLDQAASLYQGELHTLNDGSTLMLFHTEDSGDDYLTNAICCGELLRALGHQLQIEVADSGITLQLQLGLTLGDGLFGLSQIDLLLTETAQDALALSQHSRNLLLVERKINDDALIRQRARIRPIASPEGACCVERLMEPYPSMLERQLARMHERQA
>NZ_CP014693.1|WP_043041918.1|3125673_3126888_-|phosphoserine-phosphatase-SerB
MREIVLINITGSDRPGLTAAITGVLAQGGVNILDIGQAVIHDTLSFGILVEIPDAEQGKSVLKDILFTAYKLDQQVRFTPVSEDDYRHWVAGQGKKRHIVTLLTRKVTAEQLQRVSSITAKYDLNIDHIDRLSGRMPLDTPDDKGKGCIEFSVRGEPADPQALRAEFLSVAQELNVDIAFQEDSLFRRNRRLAVFDMDSTLIEAEVIDELAKAAGVGDKVSAITERAMAGELDFRASFKERLALLKGLDVSVLDSIGASLRLTEGAETLFAELKRLGYKTAILSGGFTYFAKQLQAKLGIDYVFANELEVVDGKVTGVAVEPIVDAQRKADLLRELAEKEGLRLEQTIAVGDGANDLPMLAIAGLGVAFRAKPLVKQSARQAISTLGLDGVLYLLGFRDRDGQP
>NZ_CP014693.1|WP_033028051.1|3123751_3125512_+|hypothetical-protein
MNETSPLQLLRVMTPTQARLSFCDATPRDLKRWIANLPKANIGETARLLYQALGELNQLLTPSDNRLQLLELLRPEVYYVCKHLERHFLQQAIVLDERSRKIVNLCQALQTQLAMGYKQIVARMASKYTKDRARLLSTALQRAMHALNGPLLRASQLYSPVPEGLWLDLHQLYRIACLHRLQHLSVSDELASQVHQLNPEQTYVVALLLGASRSNQLRQSQIGWLTQALESWSQWVKLDPTSSAASLFAVAPELDVGPRYRSKFRAEQQPTLQGFDPQPLVRAIATHLEQPAEHSLPIPGGMSVDTLHHLQAAWGEAAERSFQRTEGNGTLTLCVGMSALHYYLGGERSFTEILKSPGTRKARFEASPSKTSDTWKQAFDAAPAGDSDLLPYEEIEYPVNPADDDGTSSDNQHHFPTYDLPIINHSPGGYCLGWPKEVPEQLQAGEMIGIRDTSDQAWSVAVVRWIRQVRNGAMQMGIELVAPHAQPCGLQLVREENEHGHYLRGLLLPEISAIDLPPTMIAPRLPFQEGQRVLINTNGQERRAGLDRRVTSTHSFNQFAYHPEDSTANGDGGEQEGNFDSLWKSL
>NZ_CP014693.1|WP_003197192.1|3122693_3123554_+|phosphatidylserine-decarboxylase
MKNRLFILTQYLLPHHLLSRLAGCIAECRVRWFKNAFTAWFAKRYQVDMSQALVEDLTAYEHFNAFFTRALKDGARPLDDTPGAILSPADGAVSQLGPIEHGRVFQAKGHSFSVLELLGGDAANAAPFMGGDFATIYLSPKDYHRVHMPLAGTLREMVYIPGRIFSVNQTTAENVPELFARNERVACIFDTERGPMAVVLVGAMIVASIETVWAGLVTPPKRQLKTFRYDEAARAPIHLEKGAELGRFKLGSTAIVLFGPDQVKWAEGLVAGSPVQMGQGLALPKA
>NZ_CP014693.1|WP_003197174.1|3136586_3136946_-|hypothetical-protein
MSEDNSGPTKKDSISPEASQIPPILDEAAKRAIDHYLDPKPQAKKKKPSGQLFTVVEGVDTESLLANLSETLASADAMVSDLAFDLKGSRRHVALGIQQLIELGALLANRMLDNVNTQS
>NZ_CP014693.1|WP_069971204.1|3137439_3138255_-|3',5'-cyclic-AMP-phosphodiesterase
MPSVSSLTTADAALLVQLSDSHLFAEADASLLGMNTRDSLWAVIDLVLKQQPDIDLMLATGDLSQDGTLESYAAFRQLTARIDAPARWIPGNHDEPQVMLEAAVKSTLLDPVVDIGNWRVTMLDSAVPGSVPGFLAEEQLILLANALSEAPERHHLVCLHHHPVSIGCAWMEPIGLRNPEALFAVLDRFPQVRAVLWGHVHQEVDRMREGVRLLASPSTCIQFEPGSEDFAVGSQAPGYRWLRLLPDGRLETGVERVVGFAFTPDYGSNGY
>NZ_CP014693.1|WP_003186471.1|3138354_3138807_-|DUF1249-domain-containing-protein
MVLNKLRDRYRVDLVGLQAACEANYARLMRLLPDMRNDPAPRRIAVTHGDQMLGVLALEVLQTCPYTTTLQVRQEHSLPWLPVPQLEVQVYHDARMAEVVSAEHARRFRGIYPYPNASMHQPDEKAQLNLFLGEWLSHCLALGHEFEVVR
>NZ_CP014693.1|WP_003197169.1|3138797_3139415_-|NUDIX-domain-containing-protein
MTDFANAAPSTVDIVKRESCFQGFYKLDRVHLRHELFAGGMSREISRELFVRHDAVCVLPYDPQRDEVVLIEQFRVGAMDKIANPWLVELVAGLIDKDEQPEEVAHREAQEEAGLAFAALWPMTKYFPSPGGSDEFVHLYLGRCDSTGAGGLHGLVEEAEDIRVKVWSFEDALQAVRDGQICNAPSIIALQWLALNREEVRGLWS
>NZ_CP014693.1|WP_003197166.1|3139629_3140376_+|DUF3298-domain-containing-protein
MSLFKTASVAAIALTLGACQSLFQPNYRAPLETTRDASEQLQQGCASADCPLVNIDTLHFPTEPALDGIVEKRLLQMTRTTPDAPVAPTLAAYREQFLRNATPRNSSYLQAKVREQHDGLVIIELSSYLDTGGAHGTPGRGFINYSRQQHKVLTLSDMLLPGQEEAFWKAAQVAHNSWLISTKLDQEPEFLKQWSFQKTPHVALTYGGVILKYEVSTIAPYALGHIELKIAYPRLNGILKPELFPGRS
>NZ_CP014693.1|WP_069971205.1|3140344_3141637_-|putative-hydroxymethylpyrimidine-transporter-CytX
MNIQPSTYSPNTAVPLDKRVFGARDLFSLWFSLGIGLMVLQVGALLAPGLGLSGSLLAIFLGTLVGVLLLAAVGVIGSDTGLSAMAALKLSLGGKGASVPAVLNLLQLIGWGSFEIIVMRDAASLLGARAFSEGSLGSNPLLWTLFFGALATLLAVSGPLTFVRKVLRKWGIWLLLAACIWLTWNLFAKADLAALWAQAGDGSMPLAVGFDIAIAMPLSWLPLIADYSRFGKRAKNVFGGTALGFFIGNFWLMSLGVAYTLAFAPSGEVNALLLALAGAGLGIPLLLILLDESENAFADIHSAAVSSGMLSGLKVEHLALAIGVLCTLIACFAPLAQYQNFLLLIGSVFAPLFGVVLVDHFILRKRSSQVVSAALRWPALLAWLGGVSTYHLLANFYPDIGATLPSLILAGLLQLLLGRAFSYGRGTARA
>NZ_CP014693.1|WP_003197160.1|3141808_3143698_-|phosphomethylpyrimidine-synthase-ThiC
MTTKSKNATNLSESAQVDQQSVQPFTRSQKIYVQGSRPDIRVPMREISLDVTPTDFGGEINAPVVVYDTSGPYTDPNVIIDVRKGLADVRSSWIEARGDTERLAGLSSSFGQERLADPELTKLRFAHVNNPRRAKPGANVSQMHYARKGIITAEMEYVAIRENMKLEVARAAGLLDQQHAGHSFGASVPKVITPEFVRDEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGAAEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIEAVDVDVAQGLAEQAERFKKEGSQLYKKV
>NZ_CP014693.1|WP_003197157.1|3144153_3145593_+|TolC-family-outer-membrane-protein
MLRKLSLALAVSCASNAMAWAAEAPLTTKTDLVSVYQEAVDNNADLAAARAQYGAQKEVVPQARAGLLPNLSAGADLNNTRTELDQPAMTATRSSTVYQATLSQPIFRADRWFQLQAAKSVDEQASLQLSATEQNMILQSAESYFNVLRSQDNLASTKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRILAQRQVDDAFEALITLTNRQYNSLQGIVHTLPILPPTPNDAKAWVDTAAKQNLNLLASNYAVDAAEDTLRQRKAGHAPTLDAIAQYKKGDNDGLGFTNPNPTGQRYGGDAEQRTIGLQLSIPIYSGGLTSSQVRESYSQLTQTEQQREGLRRQVVENTRNLHRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDAQRQLYTSVRNYNNARYDYILDNLRLKQAAGTLSPADLQDLSRYLKPDYNPDRDFLPPDLAQAAAAQLRSRPTQ
>NZ_CP014693.1|WP_069971206.1|3145631_3146912_-|lipid-IV(A)-3-deoxy-D-manno-octulosonic-acid-transferase
MNRTLYSALFYLGLPLVAIRLWLRARKAPAYARRIGERFSWGLPVMVPGGIWVHAVSVGESIAAAPMIRALLQRYPQLPITVTCMTPTGSERIQALFANEPRIQHCYLPYDLPCAAKRFLDRVRPSLAVIMETELWPNHIHQCARRGIPVALANARLSERSARGYGRFPKLTRPMLAEMSLFAVQTEAEAERFRQLGARAETVEVTGSIKFDLTIDPQLLEDASALRRRWQATERPVWIAASTHEGEDEVVLAAHRRLLESYPDALLILVPRHPERFDAVHQLCVSEGLATVRRSSGQSVTAQASVLLGDTMGELLFLYALADSAFVGGSLVPNGGHNLLEPAALAKPVLSGPHLFNFLEIAAQLHAAGALAEVDDAESLALAVQRLFELPRDAQRMAEAGLKVMRSNQGALQRLLEGLGRLLARQ
>NZ_CP014693.1|WP_003197154.1|3146934_3147825_-|LysR-family-transcriptional-regulator
MNVQWNLEQLRLFVGVAEKRSFSAVARDQRKAQSAISSAIALLETDLGVSLFERSSGRQPRLTDAGEALLEEAREVLRQCERLNGRALALMRGQEASLRLAQDEAMPYQPVIDSLAALAEQFPTLEVQLASAAQGDVARKLVERRADLGLLFYHDQIPEALERRVLGSVEMVTVCGRGHPLANHAYVTCREMARHRQLLMATQSSVYPGSEQASPQVWRADSFYVLAEWLRSGLGWAWLPRHVVQYPAYLGDMVELSSEWTPPALVVELVWRRDEPLGPAARWLAERFAVQLQAIG

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Crispr_ID: NZ_CP014693_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_7

3544617-3544756

Orphan

Consensus_repeat	Method
GTCCTGCTCAAACAGATCTGACGGGTGTACGACCGGGAGAGCCAGGTCGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_7

>merge|NZ_CP014693|7|3544617-3544756|CRISPRCasFinder
GTCCTGCTCAAACAGATCTGACGGGTGTACGACCGGGAGAGCCAGGTCGGCTGTCAGGCCGCCTCGCGAGCAAGCTTTGCTCCCACAGGTCCTGCTCAAACAGATCTGACGGGTGTACGACCGGGAGAGCCAGGTCGGCT

>NZ_CP014693|7|7|3544617-3544756|CRISPRCasFinder
GTCCTGCTCAAACAGATCTGACGGGTGTACGACCGGGAGAGCCAGGTCGGCT	GTCAGGCCGCCTCGCGAGCAAGCTTTGCTCCCACAG
GTCCTGCTCAAACAGATCTGACGGGTGTACGACCGGGAGAGCCAGGTCGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_069971252.1\|3527047_3541186_+\|retention-module-containing-protein	unknown	unknown	gnl\|CDD\|369942
NZ_CP014693.1\|WP_003196528.1\|3555181_3557062_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP014693.1\|WP_027912081.1\|3544961_3546908_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP014693.1\|WP_003196536.1\|3547815_3548508_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP014693.1\|WP_043043120.1\|3541817_3542162_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003196554.1\|3523145_3525302_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
NZ_CP014693.1\|WP_069971254.1\|3550908_3554448_+\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|341253
NZ_CP014693.1\|WP_003196558.1\|3520500_3521403_-\|TauD/TfdA-family-dioxygenase	unknown	unknown	gnl\|CDD\|225086
NZ_CP014693.1\|WP_069971253.1\|3544173_3544362_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003196534.1\|3549192_3549969_+\|DUF3050-domain-containing-protein	unknown	unknown	gnl\|CDD\|378614
NZ_CP014693.1\|WP_155252638.1\|3526687_3526831_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003196538.1\|3546922_3547615_-\|transglutaminase-like-cysteine-peptidase	unknown	unknown	gnl\|CDD\|226198
NZ_CP014693.1\|WP_003196556.1\|3521788_3523156_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP014693.1\|WP_033063711.1\|3557805_3558807_+\|FecR-family-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP014693.1\|WP_039011935.1\|3542744_3544175_-\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|226192
NZ_CP014693.1\|WP_003196529.1\|3554480_3554951_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP014693.1\|WP_003196532.1\|3549965_3550898_+\|diiron-oxygenase	unknown	unknown	gnl\|CDD\|378680
NZ_CP014693.1\|WP_028237216.1\|3557315_3557816_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|182018
NZ_CP014693.1\|WP_003196552.1\|3525339_3526689_-\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP014693.1\|WP_003196545.1\|3541327_3541666_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_003196558.1\|3520500_3521403_-\|TauD/TfdA-family-dioxygenase	gnl\|CDD\|225086	COG2175, TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	1.47983e-101
NZ_CP014693.1\|WP_069971252.1\|3527047_3541186_+\|retention-module-containing-protein	gnl\|CDD\|369942	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal. Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.	4.48718e-12
NZ_CP014693.1\|WP_003196528.1\|3555181_3557062_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.08112e-79
NZ_CP014693.1\|WP_003196536.1\|3547815_3548508_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.18934e-40
NZ_CP014693.1\|WP_003196554.1\|3523145_3525302_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP014693.1\|WP_033063711.1\|3557805_3558807_+\|FecR-family-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	4.41612e-78
NZ_CP014693.1\|WP_027912081.1\|3544961_3546908_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.61318e-54
NZ_CP014693.1\|WP_069971254.1\|3550908_3554448_+\|non-ribosomal-peptide-synthetase	gnl\|CDD\|341253	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	5.30918e-140
NZ_CP014693.1\|WP_003196534.1\|3549192_3549969_+\|DUF3050-domain-containing-protein	gnl\|CDD\|378614	pfam11251, DUF3050, Protein of unknown function (DUF3050). This bacterial family of proteins has no known function.	1.09221e-122
NZ_CP014693.1\|WP_003196538.1\|3546922_3547615_-\|transglutaminase-like-cysteine-peptidase	gnl\|CDD\|226198	COG3672, COG3672, Predicted transglutaminase-like cysteine proteinase [General function prediction only].	1.57234e-41
NZ_CP014693.1\|WP_003196556.1\|3521788_3523156_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	7.77439e-128
NZ_CP014693.1\|WP_003196552.1\|3525339_3526689_-\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	1.12258e-75
NZ_CP014693.1\|WP_003196529.1\|3554480_3554951_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	4.47035e-33
NZ_CP014693.1\|WP_003196532.1\|3549965_3550898_+\|diiron-oxygenase	gnl\|CDD\|378680	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF. This family is a metalloenzyme which is involved in the biosynthesis of antibiotic aureothin by catalyzing the formation of p-nitrobenzoic acid from p-aminobenzoic acid. AurF is a non-heme di-iron monooxygenase which creates nitroarenes via the sequential oxidation of aminoarenes.	0.000415127
NZ_CP014693.1\|WP_028237216.1\|3557315_3557816_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|182018	PRK09651, PRK09651, RNA polymerase sigma factor FecI; Provisional.	1.29465e-56
NZ_CP014693.1\|WP_039011935.1\|3542744_3544175_-\|IS1182-family-transposase	gnl\|CDD\|226192	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.30406e-32

>NZ_CP014693.1|WP_069971253.1|3544173_3544362_+|hypothetical-protein
MGSPCDEVLGNHSKGWLRGFYTLWAQRGYLGIHAEVPTAQCLRSASVVNGAPEINVHHEAAW
>NZ_CP014693.1|WP_039011935.1|3542744_3544175_-|IS1182-family-transposase
MKRFIQGEHRDQTTLLPESLDDYVSDTNPVRVVDVFVDELDLISLGFDSAVPAKTGRPAYHPAVMLKIYIYGYLNRIQSSRRLEREAQRNVELMWLTGRLMPDFKTIANFRKDNGKAIRGVCRQFVVLCQQLGLFSEHFVAIDGSKFKAVNNRDRNFTSAKLKRRMEDIESSIARYLKALDEADREEPKSSGPKGGLEEKIAKLKEQMKALQAIEIQLEASPDKQISLTDPDARSMMMTSGHGIVGYNVQTAVDTKHHLIVAHEVTNVGHDRDQLSSMAQQAREAMQIESLSVVADRGYYKSVEILACHEAGITAYVPKTLSSRAKFDGRFGNDEFVYDADKDVYVCPAKQVLIWRNSYVDKGKKLDVYWHSNCRACSIKAQCTPARERKIRRWEHEALLEEMQARLNNEPQMMNIRKRTVEHPFGTLKQWMGATHFLTRRLAGVSTEMSLNVLAYNWKRVMKILGAQGLMKALAA
>NZ_CP014693.1|WP_043043120.1|3541817_3542162_-|hypothetical-protein
MTTAETKNTSRSSTTLDEAAERVLDYYLNPKPTDEASGKNQTAQLFMVSPDIDTETLLANASEDLLSISAIAADLADDVDVSRRSVILAISRMADGVHLLVEGAMDRLEVQASN
>NZ_CP014693.1|WP_003196545.1|3541327_3541666_+|hypothetical-protein
MFYVQRDAQGLLVRVEATAYAEATETLPADNHEIQDWFANQAVENSLKQLKQSDLEMIRVLDDLIQVLTSKGVIRVTDLPPAAQAKLMDRTQAREALGGLSRLIDDDEKGLI
>NZ_CP014693.1|WP_069971252.1|3527047_3541186_+|retention-module-containing-protein
MSSVIAVVKSIVGQVFVVSPEGIRRVLIEGDRLYTGDQLDTGPSGAVTLDLADGRTLDLGRDTQWSANAPDSSTDLAQATAQAAPSVEELQQAIAAGVDPTTALEATAAGATAAGTGGAAGGGHSFVVLDATAGSVDPTVGFPTEGLAAAAATDNNTLGGDTTDTTANAVLNATMTLSATPTLTEAGGVLVYTATVTQAPQTALTVTLSNGAVIVIPAGQLTGSVNVPLAPNDTVYNDPSQISVTVTGTTGGTGIAVTVPTTPAVTQITDTIDTTTVTLSAGNTVTEGGQITYTATLTNPAQTPVTVTLSNGSVITIAAGQTTGTVNVDTPANDVYNNGSTVSTTITGATGGNFENLVPSTTPAVTTITDSVDTTGLTLTASNTITEGGQITYTATLTNPAQTPVTVTLSNGSVITIAAGQTSGTVNVETPANDVYNNGSTVSTTITGATGGNFENLVPSTTPAVTTITDSVDSTGLTLTASNTITEGGQITYTATLTNPAQTPVTVTLSNGSVITIAAGQTTGTVNVETPANDVYNNGSTVSTTITGATGGNFENLVPSTTPAVTTITDSVDSTGLTLTASNTITEGGSIVYTATLTNPAQTPVTVTLSNGSVITIAAGQTTGTVNVETPANDVYNNGSTVSTTITGATGGNFENLVPSTAPAVTTITDSADTTGLTLTASNTITEGGQITYTATLTNPAQTPVTVTLSNGSVITIAAGQTTGTVNVETPANDVYNNGSTVSTTITGATGGNFENLVPSTTPAVTTITDSADTTGLTLTASNTITEGGQITYTATLTNPAQTPVTVTLSNGSVITIAAGQTTGTVNVETPANDVYNNGSTVSTTITGATGGNFENLVPSTTPAVTTITDSVDTTGLTLTASDTITEGGSIVYTATLTNPAQTPVTVTLSNGSVITIAAGQTTGTVNVETPANDVYNNGSTVSTTITGATGGNFENLVPSTAPAVTTITDSVDTTDLSLSASTEVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSGTVNFVTPNDALAGGDNLSVKIDDAKGGNYENLAIDGKPADTTVTDVQDTTGLTLSATDSVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSASVNFVTPNDALAGGDSLSVKIDDAKGGNYEKLDIDATPADTTVTDVQDTTGLTLSATDSVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSASVNFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDGKPADTTVTDTQDTTGLTLSATDSVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVITLSNGQTITIPVGASSGTVNFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDATPANTTVTDVQDTTGLTLSATDTVTEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVITLSNGQTITIPVGASSGTVNFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDGKPADTIVTDTQDTTGLTLSATDTVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVITLSNGQTITIPVGASSASVNFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDATPADTTVTDVQDTTGLTLSATDSVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSASVNFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDGKPADTTVTDTQDTTGLTLSATDTVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSASVNFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDGKPADTIVTDTQDTTGLTLSATDTVTEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSASVNFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDGKPADTIVTDTQDTTGLTLSATDTVTEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSASVNFVTPNDALAGGDNLSVKIDDAKGSNYEKLDIDATPANTTVTDVQDTTGLTLSATDSVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSASANFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDGKPADTIVTDTQDTTGLTLSATDTVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLLPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTDAPLVVTLSNGQTITIPVGASSASVNFVTPNDALAGGDNLSVKIDDAKGGNYEKLDIDGKPADTIVTDTQDTTGLTLSATDTVAEGGSIVYTATLTNAAGSPVTVTLSNGAVINIAAGATTGTVTVDAPKDDVYKDAGKVEVSIDKATGGNFENLVPSTTPAVTDVTDTIDNTTVSITGSTSVTEGQAATYTVSLTNPAQTEVTLKIVYSGTAADGTDFTGVYTVKIPANATSATFNVATLDDKITEGTENFVVKIDSATGGNFEHLAVSGTNGSVSTSIIDNDAPPALDLDANNSSGKTGADYQVTFTEGTTGSGVSIADTDLSITDPDSTMLTGATIVLTNRQPGDALNLGNSVNGISINANSTDGKVVLTLTXNATLADYMQQIKNISFINNSEDPSTVPRIITVTVTDGTSYSNTATTTVNVVGVNDAPVATGGAVTGTEDTSLVLGWSTFGISDVDSSATSLGVKITELPADGKLQYLDGATWKDVANNQTFTKADIDAGKLRFTPDANESGANGYVGSSTGNNQADYAQVKFQPTDGQALGNTSTVKIDITPVADAPTLNVAGNNVTSTGLIKEVWTGLSGLGTDGSGAPSGTLKSVIDAAGTPNSSSTVTNVQSDSNVNPGTASKTSGLIFLEAGKTYTFSGTGDDSLLVTIGGKTAAATTWGAGGQLNGSFTPTTSGYYTLDIYHHNQTGPGSYDVNLSVNGSTPVDLSSAGVPLYTGVTDLANSGVTVSDLHGTNGEGYYDGFKLNEGAEGTSVHLSKITTALTDTDGSESLSVKIGGMPEGSVLNDGAGHFATVGSNGEASVSGWNLGSLTLTPPTYYNGQLNLTVTSTSTEALGGSATTTAQIPVTVYPATYNAITATSGSDNVTGTDGNDIVVADIGGLTVVPGVNYNIAFMVDSSGSMSDSSIAAAKASLTSVFNTLKQSMGSNAGTVNIFLADFDNQVNKTVAVNLNDPNALTLLKGVLDSMVSGGGTNYEDVFKTTANFFNSTQALNNTGAKNLTYFITDGKPTFYQTGEQTNPTLYGNVKLDDVLSAANYTVGKYYTQTIDSTHKYTIYENGQMYLSTKSGKNWNDSYVGTVHAEGNGTFELSNQGGTGYGDYWNYVDSAAGSTDSFTLLKGLSTVEAIGLNNDVTLNDLKPYDSDSTPQTNIDPNNLANSIIGHTEATLPGSDTVNGGNGNDILFGDLVSFNGVAGEGYQAIQAFVAQQNGVDVSKVTTSNVHQYITEHYTAFDVSGAHDGNDTLLGGAGNDIIFGQGGNDTLDGGKGNDILLGGTGNDTLIGGQGNDTLIGGLGGDTFVWKAGDTGTDVIKDFKASEGDRIDLRDLLQGESGSTIDHFLKISTVDGVSSLQVSTSGQFNGANGGAATPDVTIKLEGNNWSNVNLNSLIAGSDPTIKVDHNNS
>NZ_CP014693.1|WP_155252638.1|3526687_3526831_+|hypothetical-protein
MMDFFLKHLSWITAKRGAASDDGNRNDRMSESSKQELEHALKEQVAA
>NZ_CP014693.1|WP_003196552.1|3525339_3526689_-|TolC-family-outer-membrane-protein
MRLYLFKALPFALAASFVQAQTLPQAMQQALDVHPEIQAGVNSRLAADYQLKAAKGGYLPRVDLAAGYGREGTDSVTTRSGGTNHWETLNRSESSLRLSQMVFDGFATSSEVGRQQATVNARAYSLLDASERTGLTVAQVYLDVLTRREFVRLAEENLKSHERIFDQIKLRTSRGVGSGADLDQAEARMAQARNNLITEQTNLADAETNYLSAVGQLPDQLERPADFLALLPANLTEARAQMLENSPVLRSAEADIAAAEQQYEAAKSSFYPRFDAELGRTADNDLDGQNGHNNEWQAMLRMRFNLYAGGSNKADLESKSYLSNQALDIRNNALRQLNEELGLAWNALNNANAQVPVAQQYVDRSANVRTAYQKQFSLGERTLLDLLDSENELFSASRRLAEIKNVQLFTQYRIKATMGQLLKSQGVVAPLASVVQNDMKPKVQLPGMN
>NZ_CP014693.1|WP_003196554.1|3523145_3525302_-|type-I-secretion-system-permease/ATPase
MESEVSPVELVHDPRTLHDDPLLDGLLALCMLHQKPASAAMLTTGLPLPKQRLSVELLSRAAARAGLQGRVLQRKLEQIPTIAMPALLLLKDGRSAVLLGWVGDDQARLLLSESDGGEVTISRELLADDYSGKVFFAQPQHKFDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASLLINIIAMAAPLFVMNVYDRVVPNQAESTLWVLAVGITGAYVFDLILKMLRSLCLDLAGKKTDLIISATLFERIVGMSMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFMVIAIIGGHLVWIPVLAFPIALLIGYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVNNAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAGVVMIVFGVYLIIAGSLSMGGLVACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRKVLQGAVECRQLNFTYPNQQNPALKNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDGALLVDGVDIRQIDVSELRYNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELAGVHEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERLKQRLAAVVENKTVLLVTHRASLLSLVDRLLVIDRGQILADGPKAAVMEALKKGQISVA
>NZ_CP014693.1|WP_003196556.1|3521788_3523156_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MLLKSGFKGAVGRYFKGSDSLHGQPLPEVNKALIEDAPRVVRLTIWGIIGFFVFLMLWANFAEIDEVTKGDGKAIPSSKIQKIQNLEGGIVAELFVKEGQIVDAGASLIRLDDTRFVSNVGETEADRLSMLLRVERLSAEVDDRPLNFPADVLKAVPGQAASEESLYLSRRQQLHDEIGGLQEQLIQRQQELREFVSKQAQYRSGLALQRQEINMSEPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATGKALEDRVSRTLVTSPVRGIVNKLLVNTIGGVIQPGSDLVEIVPLDDTILVEAKIRPQDIAFLHPGQDATVKFTAYDYTIYGGMKAKLEQIGADTITDEDKKTTYYVIKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTVLSYLLKPIIKARSEALHER
>NZ_CP014693.1|WP_003196558.1|3520500_3521403_-|TauD/TfdA-family-dioxygenase
MSAVSYSPDSPIANIAPQSFEIRPLRDAVGAEIVGLDLSRPVNDQDFARIHRAHLDYHVVVFRDQRITPEQQIAFSRRFGVLQIHVLKQFLLAGHPEILIVSNIIENGQSVGLGDAGKFWHSDLSYKELPSLGSMLHAQELPSEGGDTLFADMHKAWDALPEALRKAVEGRSAAHSYTARYSETKFEGNWRPTLTPEQLAQVAEVVHPIVRTHPETGRKALFVSEGFTTRIVGLPEDESAALLAELYAHSVLPQNIYRHQWQPHDLVFWDNRSLIHLAAGCPSHLRRKLYRTTIQGDAPF
>NZ_CP014693.1|WP_027912081.1|3544961_3546908_-|EAL-domain-containing-protein
MSLFKQLLIAICLFLVVAFSGSFMVSLESSRAQYVNQLRSHAQDAATALALSLTPNIDDPAMVELMVSSIFDSGYYASIRVVDVATDKTLVERTGTPDAGSVPQWFVKLIGLEPAGGDAIVSRGWEQAARVEVVSHPMFALAKLWQSALGSLGWLLLCGAVSAVLGALLLRRQLKPLDYMVHQSHAIARREFLSLPELPRTPELRRVVQAMNQMVEKLKALFQEQAERSEKLRVESYQDNLTGLANRRYFEMQLNARVSNPEQASSGYLLLLRVKDLAGLNQRLGGQRTDQLLQAVGEQLLRECERYPETHNLVTRIRGGEFAVLAPGLVREEALQLAQNLEAALASLHATGATDVASVASIGLAPFVHGDSPQAVLQLGDQALAQAESQGEPGWACLDHSAVASVGDDHHAWHTLLDQALNHQRFELYFQPVVAAQDTQVVLHYKVLSRLLDEHGQTIPAGRFLPWLERFGWTARLDRLMLEQVLRQMAGHEQSLALNLSSATLADPQALNKIFEILRAHSNLGSRLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLSRLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELAVIREMGLFGVQGQLVGEPKRWG
>NZ_CP014693.1|WP_003196538.1|3546922_3547615_-|transglutaminase-like-cysteine-peptidase
MAAPFPVLRSLRWLCSALLLAGLMLGGLQADWDFAQISRRAQALYGPLGEGQQRIDAWQQLLATQKQIPELEQLKVVNLFFNKQVRYVEDIDLWREVDYWETPIQALWKGAGDCEDYAIAKYFSLRHLGVSSDKLRITYVKALRQNRAHMVLTYYATPEAMPLVLDSLIDGILPASQRTDLLPVYSFNAEGLWLPGAKGNKKVGDTKRLSRWQDVLKKMQAEGFPVETTN
>NZ_CP014693.1|WP_003196536.1|3547815_3548508_+|GntR-family-transcriptional-regulator
MTQKPKPLSTIQVNGPIPADQARSIIEESLREAILDGRLPCGTALRQQELADLFGVSRMPVREALRQLEAQSLLNVVQHKGAVVAPLITNNAVETYALRSVLESFALRLSIPLLDDNDLALAAQYIEQLETETDHAQIGKLNRLFHMSLYHKAPNSKLLDLIERELNEEERFLRFHLSSMGLGKLSQDDHRALLDAARAKDIDNAVVLLERHLEKASVTMRRYLEQSSNL
>NZ_CP014693.1|WP_003196534.1|3549192_3549969_+|DUF3050-domain-containing-protein
MQPTKEQLSLKKHELGQHPVFSEITSIDLLRRFMESHVFAVWDFMSLTKRLQRELTCVHLPWLPPADPHAARLINEIVLGEESDDRPGAGYCSHFELYLDAMREIGADTRAIEQFITLQQEGVSPETALDSVEVEPAAARFVRQTLHTALHAPAHSVAAAFVHGRESVIPQMFQRMLDAWGIGLDQAPTFRYYLQRHIEVDSEDHGPAAEKLLARLIDGDPQRETEVLVAALAAVHSRAALWDGLRQSMAQPVAQVTP
>NZ_CP014693.1|WP_003196532.1|3549965_3550898_+|diiron-oxygenase
MNAVEYQSFADAWESRATIRTRPRRRVEDDDKLIFPMSRQPLVHSQTFLSHCPQLRDFVLVQSLYKFINDVVIFETELVDHTARRIAKNRFGIEFPFACRYDAMTVVVDEDYHALVAMDFMQQTIDMTGIEPIPLPGQIELSRAIPATLAQAPEHLLSAVELICIAIAENTVTNEVAAFARDDSVKASIKGLMADHLLDEGRHSGFWTRLVQIYWRTAPEEDRAAIARLMPGFIVQYLASDLQQAFDFELIAHLPVDESVRQSLREEASALAYPINRFHPLVGNITRFFRSSSMLASPCVRDALADYLTP
>NZ_CP014693.1|WP_069971254.1|3550908_3554448_+|non-ribosomal-peptide-synthetase
MKRLEIAVPGTSQAMAELARELELHGHGIVDRQSPANHGAVDLLIDDGTTPRAIEALSCLQVRVALRTLPGEVLPQPVVIFRDGAQRLLCQEVIAPQSDGSGQSLRLRTLATVVETGARLVSQLSRDDTCFDHWPTVHADAVDQPLLGLDALEPLAFEHGLNRPPVHWLLAAADVPVMHSIEQRMLDDATQPALWVDGQLIDYKSLRRLALRLQQPMLEILHRAEHEKGSAGEPVGARLARDEDTEVLNPTASSFIGGKPSSHRPSSHKVIGVCLPKSAHLYAAILAVLGCGAVYLPLDPQHPAQRRRFILENAQADLLLHDGDSDLGDLSLPTLNVQQLPSPKPGIPTSLIRRTVDSDEPAVAIYTSGTTGQPKGVLLSHRNLSHFCAWYGDYVGLQRDSRALQFSTINFDASLLDILPTFIHGALLVVPSEDQRRDPQQLVALIHQQHISHAFLPPALLSVMPLDTPLGLAHLITGGDVCEPFVIEQLAPQCQFHNIYGPTETTVLATTRQFGVGDNNRNLGVPIANGRVLILDEQLQPVPQGVPGELYIAGPGVGLGYLNDPTLTATRYLDLTLPTGQTLRVYRTGDIGQWTDNGIELCGRRDNQVKIRGFRVEPEEIEHCLRDSQLFRQVAVGVDERRRILAFLVHPEHSGDALQALREHVQNSLPSYMHPAAYVELPSLPYTSNGKVDRRALLAMAVQVQVDGQRRQPQNALETQLQQLWAELLELPVEDIATDESFFNLGGHSILLSRLLLSIRQTFGRSLSINRFIEAPTLMTLAKLLDDPDQNSASILSPQAFIDAEAELNLDPLPISQCGDVHKVVVTGANSFLGVHIVEALLAWGATEVACLVRASAEQSAAERFSQALQDNHLTHLDLDRVSVYAADITQPQLGLPDDVYARIDRTFGALVHNAAHVNHVLDYESLARDNVEPIFECLRLCEGRSKKIFNFVSTLSASSALDADGQVLEQPAAKTPPIYIKNGYNLSKWVGERILQRARDRGVSVNLFRPGNISFNSLTGVCQPHKNRLMLMLKGSIQLGQVPELSLNFDLMPVDFLARFIAFHASRYQPTQAVFNLHNPQPLSWDAYVASFRDSGREFSLVSVAEWQRQLARVDADNALFGVLGFYLNGFEEDIGDISLISHDNARAGVRQMGASYPEKSPALLRRGADYLKAIDFI
>NZ_CP014693.1|WP_003196529.1|3554480_3554951_+|SRPBCC-family-protein
MSAFQPDTLIKNPQACQVETSVEVAADAARVWDVVGDFGGFNHFIPALEHIEMTGEGVRSLRKKFFRDGQNLVVEQLNSRDDQAMHMTWTLIYNTLGIDNLWAAMRVEPLADNRCRATWTIIADHTDAHTPAGFRDFLQGFADEAMGNVQGMFPEA
>NZ_CP014693.1|WP_003196528.1|3555181_3557062_-|methyl-accepting-chemotaxis-protein
MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIGSSLESSIEQSGDLTASSIQNWMSGRILVLENLAQNIAHQGATADLPGLVDQPALTSNFQFTYVGQANGVFTQRPDAKMPDGYDPRQRPWYKQAVTADKTMLTPPYLAAVGGLVVTVALPVKHNGELLGVVGGDLSLETLVKIINSVDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPGTPVRIGKGIQEVELNGQDRILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAAIALLLSLLIQVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVERIHASISEVSSATRQVHDLSQRVMTSSNASLVGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQIGSREAVTTMNASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMDVSHINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI
>NZ_CP014693.1|WP_028237216.1|3557315_3557816_+|sigma-70-family-RNA-polymerase-sigma-factor
MSSPELAVQALYSRHHGWLNTWLRTRLGNAADAADLAQDTFMRLLQRSERLELRAPRAFLRTIAQGLVIDHWRRAEIERAYLETIAHLPEAETPGAEAQALILELLEAIARMLEGLKPKVRRAFLLAQCEGLTYKQIAEQMGISLRSVERYVADALYHCYVLRYES
>NZ_CP014693.1|WP_033063711.1|3557805_3558807_+|FecR-family-protein
MKAEPAEHLQSRRNGPSQQVVRQAINWLLRLRNHTTHPTLRQQCDTWRAAHPEHELAWQRVQSLHSELTSNLRAVPGAHVALDTLENSAQRLSRRQALKLLSGVALVGCAAWLGKDLGWQPWNADFATATGERRGFQLPDGTRLELNTHSAANLDFSARQRLITLARGEIMVTCGRDPGRPLRVQSRHGLFEGLEGRFVVRQDSDCTRLSVTSGRVVIRSHPNSDGTPIQVEAGQSYLVTTSTATLAPPLDMDAGAWADGLIVTRNMRLADFLNEVGRYRPGYLNCAASIADLRLSGVFRLEDTDKLLAVLPRTLPVQVRYRTRWWITVQRLA

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Crispr_ID: NZ_CP014693_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_8

4198219-4198317

Orphan

Consensus_repeat	Method
AGCCGACCTGGCTCTCCCGGTCGTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_8

>merge|NZ_CP014693|8|4198219-4198317|CRISPRCasFinder
AGCCGACCTGGCTCTCCCGGTCGTACACCCATCAGATTTGTGGGAGTAAAGCTTGCTCGCGAGGCGGCCTGACAGCCGACCTGGTTCTCCCGGTCGTAC

>NZ_CP014693|8|8|4198219-4198317|CRISPRCasFinder
AGCCGACCTGGCTCTCCCGGTCGTAC	ACCCATCAGATTTGTGGGAGTAAAGCTTGCTCGCGAGGCGGCCTGAC
AGCCGACCTGGTTCTCCCGGTCGTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_003206565.1\|4205278_4206022_-\|DUF2059-domain-containing-protein	unknown	unknown	gnl\|CDD\|378261
NZ_CP014693.1\|WP_003206583.1\|4198435_4199029_-\|type-III-secretion-system-stator-protein-SctL	unknown	unknown	gnl\|CDD\|368784
NZ_CP014693.1\|WP_013694482.1\|4199593_4200481_-\|type-III-secretion-inner-membrane-ring-lipoprotein-SctJ	unknown	unknown	gnl\|CDD\|274190
NZ_CP014693.1\|WP_013694484.1\|4194997_4197148_-\|type-III-secretion-system-outer-membrane-ring-subunit-SctC	unknown	unknown	gnl\|CDD\|274174
NZ_CP014693.1\|WP_003206571.1\|4202222_4203146_-\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
NZ_CP014693.1\|WP_003206603.1\|4190968_4191223_+\|type-III-secretion-system-export-apparatus-subunit-SctS	unknown	unknown	gnl\|CDD\|130470
NZ_CP014693.1\|WP_172831542.1\|4193253_4193757_+\|type-III-effector	unknown	unknown	unknown
NZ_CP014693.1\|WP_003206573.1\|4201919_4202129_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_069971315.1\|4192035_4193136_+\|type-III-secretion-system-export-apparatus-subunit-SctU	unknown	unknown	gnl\|CDD\|130471
NZ_CP014693.1\|WP_003206595.1\|4193912_4194362_-\|CesT-family-type-III-secretion-system-chaperone	unknown	unknown	gnl\|CDD\|341107
NZ_CP014693.1\|WP_003206577.1\|4200495_4200870_-\|type-III-secretion-system-inner-rod-subunit-SctI	unknown	unknown	gnl\|CDD\|374927
NZ_CP014693.1\|WP_003206593.1\|4194407_4194785_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003206570.1\|4203550_4204126_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003206587.1\|4197140_4197578_-\|type-III-secretion-system-chaperone	unknown	unknown	gnl\|CDD\|341100
NZ_CP014693.1\|WP_003206575.1\|4200929_4201859_-\|type-III-secretion-protein	unknown	unknown	gnl\|CDD\|368170
NZ_CP014693.1\|WP_028237453.1\|4204234_4205182_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP014693.1\|WP_003206581.1\|4199006_4199597_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003206600.1\|4191222_4192020_+\|type-III-secretion-system-export-apparatus-subunit-SctT	unknown	unknown	gnl\|CDD\|130468
NZ_CP014693.1\|WP_003206591.1\|4194791_4195001_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003206585.1\|4197564_4197789_-\|type-III-secretion-protein	unknown	unknown	gnl\|CDD\|336357

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_003206583.1\|4198435_4199029_-\|type-III-secretion-system-stator-protein-SctL	gnl\|CDD\|368784	pfam06188, HrpE, HrpE/YscL/FliH and V-type ATPase subunit E. This is a prokaryotic family that contains proteins of the FliH and HrpE/YscL family. These proteins are involved in type III secretion, which is the process that drives flagellar biosynthesis and mediates bacterial-eukaryotic interactions. This family also V-type ATPase subunit E. This subunit appears to form a tight interaction with subunit G in the F0 complex. Subunits E and G may act together as stators to prevent certain subunits from rotating with the central rotary element. pfam01991 also contains V-type ATPase subunit E proteins.	3.36036e-23
NZ_CP014693.1\|WP_013694484.1\|4194997_4197148_-\|type-III-secretion-system-outer-membrane-ring-subunit-SctC	gnl\|CDD\|274174	TIGR02516, type_III_yscC, type III secretion outer membrane pore, YscC/HrcC family. A number of proteins homologous to the type IV pilus secretin PilQ (TIGR02515) are involved in type IV pilus formation, competence for transformation, type III secretion, and type II secretion (also called the main terminal branch of the general secretion pathway). The clade described by this model contains the outer membrane pore proteins of bacterial type III secretion systems, typified by YscC for animal pathogens and HrcC for plant pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	5.3127e-136
NZ_CP014693.1\|WP_003206571.1\|4202222_4203146_-\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	1.13859e-103
NZ_CP014693.1\|WP_003206603.1\|4190968_4191223_+\|type-III-secretion-system-export-apparatus-subunit-SctS	gnl\|CDD\|130470	TIGR01403, Secretion_system_apparatus_protein_SsaS, type III secretion protein, HrpO family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FliQ. This model may not identify all type III secretion system FliQ homologs. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.20446e-20
NZ_CP014693.1\|WP_003206595.1\|4193912_4194362_-\|CesT-family-type-III-secretion-system-chaperone	gnl\|CDD\|341107	cd17024, T3SC_IA_DspF-like, Class IA type III secretion system chaperone protein, similar to Erwinia amylovora DspF (DspF/AvrF family protein). This family includes type III secretion system (T3SS) chaperone proteins similar to Erwinia amylovora DspF, Pantoea stewartii WtsE, Pseudomonas viridiflava AvrF, and similar proteins, all of which bind AvrE family type III effector proteins. In E. amylovora, a gram-negative enterobacterium that causes a devastating blight disease of apple and pear trees, the T3SS allows injection of effector DspE via the chaperone DspF. DspE has been shown to interact with several apple proteins, suppress salicylic acid-mediated host defenses and cause necrotic cell death in host and non-host plants. In Pectobacterium carotovorum, DspE is required early in solanum tuberosum leaf infection to cause cell death. Effector WtsE in P. stewartii causes disease-associated cell death in corn and requires the chaperone protein WtsF for stability.	8.41352e-34
NZ_CP014693.1\|WP_003206577.1\|4200495_4200870_-\|type-III-secretion-system-inner-rod-subunit-SctI	gnl\|CDD\|374927	pfam17001, T3SS_basalb_I, Type III secretion basal body protein I, YscI, HrpB, PscI. T3SS_basalb_I represents a family of Gram-negative type III secretion basal body proteins I. It is the inner rod protein of the secreted needle. YscI is suggested to form a rod that allows substrate passage across the inner membrane of the needle protein YscF through it.	1.8517e-19
NZ_CP014693.1\|WP_069971315.1\|4192035_4193136_+\|type-III-secretion-system-export-apparatus-subunit-SctU	gnl\|CDD\|130471	TIGR01404, Surface_presentation_of_antigens_protein_SpaS, type III secretion protein, YscU/HrpY family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	2.16268e-124
NZ_CP014693.1\|WP_003206565.1\|4205278_4206022_-\|DUF2059-domain-containing-protein	gnl\|CDD\|378261	pfam09832, DUF2059, Uncharacterized protein conserved in bacteria (DUF2059). This domain, found in various prokaryotic proteins, has no known function.	0.00224564
NZ_CP014693.1\|WP_003206587.1\|4197140_4197578_-\|type-III-secretion-system-chaperone	gnl\|CDD\|341100	cd16364, T3SC_I_like, class I type III secretion system (T3SS) chaperones and similar proteins. This family contains class I type III secretion system (T3SS) chaperones mainly found in Gram-negative bacteria such as Pseudomonas, Yersinia, Salmonella, Escherichia and Erwinia, among others. A wide variety of these bacterial pathogens and symbionts require a T3SS to inject eukaryotic host cells with effector proteins important for suppressing host defenses and establishing infection. Many of these effector proteins interact with specific type III secretion chaperones prior to secretion. These T3SS chaperones have been classified as class I type III secretion chaperones (T3SC), which are small structurally conserved dimers that interact specifically with T3SS effector proteins. Class I T3SC consists of two subclasses: IA and IB. Class IA T3SC binds a single effector, whereas class IB T3SC binds to several effectors. Class IA and Class IB T3SCs typically exhibit little sequence similarities, but share a common overall heart-shaped structure fold (alpha-beta-beta-beta-alpha-beta-beta-alpha) and features, such as a small size, an acidic pI and an amphipathic C-terminal alpha-helix. Chaperone protein CesT serves a chaperone function for the enteropathogenic Escherichia coli (EPEC) translocated intimin receptor (Tir) protein, which confers upon EPEC the ability to alter host cell morphology following intimate bacterial attachment. In Pseudomonas aeruginosa, chaperone ExsC binds small secreted protein ExsE as well as the non-secreted anti-activator protein ExsD; it relieves repression of the transcriptional activator ExsA (which activates expression of T3SS genes) by ExsD. P. aeruginosa SpcU binds the cytotoxin ExoU, which is a broad-specificity phospholipase A2 (PLA2) and lysophospholipase, and maintains the N-terminus of ExoU in an unfolded state which is required for secretion. Salmonella enterica chaperone SicP forms a complex with effector protein SptP at an early stage of its secretion process in order to avoid premature degradation, while chaperone SigE binds to effector SigD, which, upon translocation into the host cell, preferentially dephosphorylates specific inositol phospholipids that are thought to be crucial for subsequent activation of the host cell Ser-Thr kinase Akt. This family also includes Yersinia chaperone/escortee pairs SycE/YopE, SycH/YopH, SycT/YopT and SycN+YscB/YopN, all of which bind to specific Yersinia outer proteins (Yops). Also included are several DspF and related sequences from several plant pathogenic bacteria. The "disease-specific" (dsp) region next to the hrp gene cluster of Erwinia amylovora is required for pathogenicity but not for elicitation of the hypersensitive reaction. In addition, a group of proteins including Escherichia coli YbjN, Erwinia amylovora AmyR, and their homologs, are included in this family. They share a class I T3SC-like fold with T3SS chaperone proteins but appear to function independently of the T3SS.	1.60644e-05
NZ_CP014693.1\|WP_028237453.1\|4204234_4205182_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	5.61635e-39
NZ_CP014693.1\|WP_003206585.1\|4197564_4197789_-\|type-III-secretion-protein	gnl\|CDD\|336357	pfam06266, HrpF, HrpF protein. The species Pseudomonas syringae encompasses plant pathogens with differing host specificities and corresponding pathovar designations. P. syringae requires the Hrp (type III protein secretion) system, encoded by a 25-kb cluster of hrp and hrc genes, in order to elicit the hypersensitive response (HR) in nonhosts or to be pathogenic in hosts. The exact function of HrpF is unknown but the protein is needed for pathogenicity.	2.16729e-12
NZ_CP014693.1\|WP_003206575.1\|4200929_4201859_-\|type-III-secretion-protein	gnl\|CDD\|368170	pfam04877, Hairpins, HrpZ. HrpZ from the plant pathogen Pseudomonas syringae binds to lipid bilayers and forms a cation-conducting pore in vivo. This pore-forming activity may allow nutrient release or delivery of virulence factors during bacterial colonisation of host plants. The family of hairpinN proteins, Harpin, has been merged into this family. HrpN is a virulence determinant which elicits lesion formation in Arabidopsis and tobacco and triggers systemic resistance in Arabidopsis.	0.000243004
NZ_CP014693.1\|WP_003206600.1\|4191222_4192020_+\|type-III-secretion-system-export-apparatus-subunit-SctT	gnl\|CDD\|130468	TIGR01401, Secretion_system_apparatus_protein_SsaT, type III secretion protein SpaR/YscT/HrcT. This model represents members of bacterial type III secretion systems homologous to the flagellar biosynthetic protein FliR (TIGRFAMs:TIGR01400). [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	6.84646e-56
NZ_CP014693.1\|WP_013694482.1\|4199593_4200481_-\|type-III-secretion-inner-membrane-ring-lipoprotein-SctJ	gnl\|CDD\|274190	TIGR02544, YOP_proteins_translocation_lipoprotein, type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	2.02394e-75

>NZ_CP014693.1|WP_003206585.1|4197564_4197789_-|type-III-secretion-protein
MSSADAVQRRLDTYFQRATDNVNNAAMNAAESQSLDDMHSFVTSMNGMSVAVNAATQQTTAHHNLAKAIIDAMP
>NZ_CP014693.1|WP_003206587.1|4197140_4197578_-|type-III-secretion-system-chaperone
MQCHELRTQLTRWSASVDGPEHFTVVIDDGDATFSKLEEGLLVSVELSVPATREVALEDLLRLAHPSLSRFPGALARSPQDGRLWLLAQLPPDRHIDDLIEVLEALLNQRDTWQSILNKDQRAVAAPVARRLSHSHLLGTGIRHA
>NZ_CP014693.1|WP_013694484.1|4194997_4197148_-|type-III-secretion-system-outer-membrane-ring-subunit-SctC
MPNRWLAPYRLMTAGKVHLRQLIAHRWTGPSLIALALTGALGASLPAQAAVPTDWKNTPYAYDAQSTPLAKVLGDFANTFAVQLVIDGTVKGTVDGRMRAESPQAFLDRLGLENRFQWFMYGNTLYVSPLQNQDSTRLEVSADAVPDMKQALTDIGLLDPRFGWGELPDEGVVLVSGPERYVRLVAQFAEVRKTPEEKQEVISFPLRYATAADRNVKYRGETLVIPGVASILKGLLESRSAVSGGMQTASPQASFQNMQNQQSMTMGNIEQLAMNGMGRPNTSRVPSGANSGAGGRGKIRVEADVRNNAVLIYDAPKRREIYTPLIRDVDVPRKLVEIDAIILDIDRTQLAELASNWNVESGDLIGGASMIRPGASSTVFIQDYGDFSAQLRALEGRGLASVVANPSVLTLENQPAVIDFSRTEYISAIGERVATVEPITAGTSLQVVPHAIETGGRNQIQMSLEIEDGRIEPSEVGQQTPSVRRGVVSTQAVMGESRSLVVGGFHTEETGDNLERVPWLGRIPLIGPLLFSSTTRETSRRERVFILTPRLIGDQVDPARYISALDREQVDSAMARLEERRNGTRPVGRIEVSDVLAQLADGNIPATFKQAPSIPYSPDTLCALQPGLSLDAARAQWFAGPDYGIAVGVIRNDDQRRLRFDEASCGSRWTLATSAWPKVWLEPGEETEVFVVMKQPTRTPGGERPSLLQTSARTLP
>NZ_CP014693.1|WP_003206591.1|4194791_4195001_-|hypothetical-protein
MSRTPLLLVLLLSLPVFAGCANRSGCQGDACSRAEPDNGRLVIWWSPGMRGGLGSPEHPLDHSVVPLEN
>NZ_CP014693.1|WP_003206593.1|4194407_4194785_-|hypothetical-protein
MSFSVHSVSTRQAFQKNIIAGIATYWEIAPGIEFCLRREPHSVGLALQIQSQALRANQIQHALERRFAHPTDYAQLFVFLDPQRALVVWQALPDSSISIELLDEIQSRQLSLLGLEDLDDYSATY
>NZ_CP014693.1|WP_003206595.1|4193912_4194362_-|CesT-family-type-III-secretion-system-chaperone
MTVAPLAQRLISALAEHLHADLQLEGGVCALYDASNREAVVIELPGHGDVAILHSSIDVPAHAPGLHKRLLELNFRLDLLGGSWLALDDKSSVRLCAHCPLAMLDEVQFCHWVVGFIAQVGDVRARLAVPATPGGPRPASLNMSRTRLG
>NZ_CP014693.1|WP_172831542.1|4193253_4193757_+|type-III-effector
MPEPRPLTSPLGGTGALRGTDSLSPSRSPSLSQRPREAQQREGTQXLHDRGRSSSTPPAVHQRGRTRTRDTNHTAAPNDTQPLDDAQTPSRTPDSFMSEMETRQKQLMEKQFQLQMGMEERQSAMLLVKSSADMAKLMSDTVTEVTKGFMDSARKVMQEGGEAMKLR
>NZ_CP014693.1|WP_069971315.1|4192035_4193136_+|type-III-secretion-system-export-apparatus-subunit-SctU
MSEDSGEKTKRATPKKIRDARNKGQVGQSQDLSSLLVLAAITEVALTQADDSMQALGDMVTFPLHRLDVDFVRAFEETLAHAGGVLLNFTLMTVGLAIVTRLVAGWIQFGFLFAPEALQPDPNRLNPMNQAKQMFSGQALINLFMGLVKAVFIGAVIYLVTLPALGSLINLVNGDLNSYWRGLASLFRHIMHICLGVLLVLALLDFGLQKYFFAKRLRMSEEEVRKEFKEMEGDPHVKMHRRSLARQLVDQPVNKETKPVEDADMLVVNPTHFAVALLYRPEETPLPQLIVKGVDAEARALIERAKVARVPVIQCIWLARTIYREDVGAYIPRETLQAVAHIYRVLRELDDEAKGEVIEIPELNQR
>NZ_CP014693.1|WP_003206600.1|4191222_4192020_+|type-III-secretion-system-export-apparatus-subunit-SctT
MTAQAFGPYFDLLLSIALGMARIYPVAYLVPVFCFQHLRGLPRHAVVFALGMLPAPGIRQALIDAQVNWLSLAGLMFKELVLGFLLGVLLAMPFWLYESVGALLDNQRGALIGGQLNPALGSDTTPLGLLFKEMTILLLVTTLGIGTLTQVIWDSYLVWSPTVWFPLPGADGFGVFLGLLGEMFMHMMLYAAPFIGLLLLVEFSLALLSLYSPQLQVFVLAMPAKSLIGLGFLLFYLPTLWDAMTGRLGRYGEIRHLLHLLLPSP
>NZ_CP014693.1|WP_003206603.1|4190968_4191223_+|type-III-secretion-system-export-apparatus-subunit-SctS
MDALTLFKEGMLLVVLLSAPPLIVAVIVGVLTSLVQALMQIQDQTLPFGIKLVAVGLTLLVTGRWIGVELLGLLRRAFEMMANT
>NZ_CP014693.1|WP_003206583.1|4198435_4199029_-|type-III-secretion-system-stator-protein-SctL
MLARRSLELRPDGQGLSQPYIARETLVDCARAQVVLEQAQAQAGQLLERANAEADATVLEAQAQFWEKAETLLAAWDTQRQAMWERIESSAAHLVNEALGTLLNEVPQQARIDALVRQLASRQDDPISATLRCHPEDLASLTRSLGTDSRRPWTPVADADMERHQLKLETPGGTYQLDWPTAVEALRLPEPQNITAS
>NZ_CP014693.1|WP_003206581.1|4199006_4199597_-|hypothetical-protein
MTAEIAWVRWWSLAWREADRGWYSPALGLLTAPQIDVLARGQHAALAHSFGMTPCTPPPPSPALQSLFCGTPRTLALACELVANTCAPLTATQALSAQDRAWCERTARALRPGHWLEQDQDPLALLRAWLDERAWERARLAFPRDRIIAIESAPAPQPPAAKLNTLWQSACWKAEQSLAPSAPIQTERHDARSAFA
>NZ_CP014693.1|WP_013694482.1|4199593_4200481_-|type-III-secretion-inner-membrane-ring-lipoprotein-SctJ
MSMRAFSTLLLCLLLTGCDERTALHSHLSEQDANEVIAELANKNVEASKQVDKDGLTVLVEPADMNSAVQVLEAAGLPRRSRSSLGEIFRKEGVISTPMEERARYIYALSQELESTLSQIDGVVLARVHVVLPERVAPGEPVQPASASVFIKHTNALDPDSITPRVRNLVASGIPGMADATQNPTKLSVVFVPAAPYQERRKMAYFGPFLMQADDIGYWRAVTVTASITLLAILMGVLYGLYRLWRQGVLVLPRLLDRKFSKPARTPAAPQSSATPGLFAVKNPGTKPDSNGTAA
>NZ_CP014693.1|WP_003206577.1|4200495_4200870_-|type-III-secretion-system-inner-rod-subunit-SctI
MDVQAIDPSNLASTAAKTSAKPHASAETSDVSWFNAQMRDKAPAPDSENNVAARIIDSLSSRSGELQRLDDRANRDMLKAIRTADPKDMLQSNRSLSSFHLESLMTAKIVSKGSQAIEKLTNLQ
>NZ_CP014693.1|WP_003206575.1|4200929_4201859_-|type-III-secretion-protein
MHIDLPDSLRAQRDLPHDESTRRPAPTPPGLANVVAEHLALHGTGDRLRESLVQWGAEHGSTGGQSRFGWPSPQDRLAAETDDPLRLVLEDILEEINGGTGSNLDVDIDDAYSNEDLFNDLAQMFAHRRQPIGDNDVDSQSDFGNANNPFCGALFGAWEMEGDHATRRSRHDASLSLLLKIIAVLGRRKLLTLLDIEEGDGQARYEPDDQDLLFEIAAFMDQHPARYPPPTPPDAERWTWTERIARGTALDARETRLFQLALEELDFALARLAGQQPLLRQRTRRNREEIEFHLSVTGSARNVLRLMCA
>NZ_CP014693.1|WP_003206573.1|4201919_4202129_-|hypothetical-protein
MSFGGASLAASTAAMQQMDATSAAMTTMKSQFDQKKLVADTMNAIAAGSMDTATKAITAMGEASKNIRF
>NZ_CP014693.1|WP_003206571.1|4202222_4203146_-|sigma-54-interacting-transcriptional-regulator
MQKLLCAALSNPYKEDALNLEAFVQSVAPLMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQLFGANTGAFTGANQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQSIPVNMRVIASAQCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRREAQALDRPYVAPSPALLRQLLGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKLKEHLQQFEKILIEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQISTS
>NZ_CP014693.1|WP_003206570.1|4203550_4204126_-|hypothetical-protein
MRPSHRTTLLASLLALGCAVVLWMAYDWFQGRFLRAFSQHTAVFSGDPLRLPADLAGPGAIRLVHFWDPACPCNVGNQQHLSELVDKYVPQGVEFYAVQKAGSQGQLPATLSHFKTLPTLPGSSQIPASPAVAIWDRSGKLAYFGPYSEGLTCNSSNSFIEPILEALSVGREVSATHTLAVGCYCPWSVSN
>NZ_CP014693.1|WP_028237453.1|4204234_4205182_+|alpha/beta-hydrolase
MPATFDPDLLRASLQPLAQWQALSEQAQAYQRFYGLDFPQRSVRKGLGRFEVGGYELVSQVWWPEKAVATLFVFHGYYDHMGLYRHLIEWALEQKFAVIACDLPGHGLSSGERASIGDFAEYQAALQGLLAEAGTLDLPQPWHLCGQSTGGAIVVDHVLNQGAQSPAQGQVILLSPLVRPRAWGWSRLSYYLLKPFVKGIARRFSENSTDPDFLPFLQADPLQPLRLPTAWVGALGQWIKRIEAAPSSPRQPLIVQGQADMTVDWAHNLQVLRSKFDRPQVLMLPEGRHHLANEALALRQEMFGFLTKRMSRVRR
>NZ_CP014693.1|WP_003206565.1|4205278_4206022_-|DUF2059-domain-containing-protein
MRRLLFSLLMFCVLPAWADSYDQLYKVAGWPEQRAHFNDALSAAQQRYQSSLPPAVFQALVNNSNQRFASQAMDQRAEAQMRKNLRDPSPALSFFQSPLGRKVVAAELLATRRDQLAKNAKGLPKMPASDNRLLIIGHLAQALPAREAGAEVSLAIAGVAADSLSSMIPGLLGGGQAQGMLNGQRQRLMEQIGADLNNTLLYVYRDLTDTELEEFATFAESTEGQAYYQAALAAIRAGLAVGQNLGQ

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Crispr_ID: NZ_CP014693_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP014693_9

6671729-6671823

Orphan

Consensus_repeat	Method
TCGCGAGCAAGCTCGCTCCCACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP014693_9

>merge|NZ_CP014693|9|6671729-6671823|CRISPRCasFinder
TCGCGAGCAAGCTCGCTCCCACAGGGGGATTGGGTAAGGCATCAATATTTGTGTTGAATTTGCAGCTGTCTTCGCGAGCAAGCTCGCTCCCACAG

>NZ_CP014693|9|9|6671729-6671823|CRISPRCasFinder
TCGCGAGCAAGCTCGCTCCCACAG	GGGGATTGGGTAAGGCATCAATATTTGTGTTGAATTTGCAGCTGTCT
TCGCGAGCAAGCTCGCTCCCACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP014693.1\|WP_013693534.1\|6668900_6670700_-\|thiamine-pyrophosphate-requiring-protein	unknown	unknown	gnl\|CDD\|181344
NZ_CP014693.1\|WP_027911906.1\|6645804_6648165_+\|type-II-secretion-system-secretin-GspD	unknown	unknown	gnl\|CDD\|274175
NZ_CP014693.1\|WP_069971581.1\|6652749_6665373_+\|filamentous-haemagglutinin-family-protein	unknown	unknown	gnl\|CDD\|372178
NZ_CP014693.1\|WP_027911911.1\|6674545_6675757_+\|cytochrome-c-biogenesis-protein-DipZ	unknown	unknown	gnl\|CDD\|239310
NZ_CP014693.1\|WP_003202574.1\|6680611_6681628_+\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NZ_CP014693.1\|WP_069971580.1\|6649722_6650934_+\|type-II-secretion-system-inner-membrane-protein-GspF	unknown	unknown	gnl\|CDD\|273980
NZ_CP014693.1\|WP_003202577.1\|6679597_6680575_+\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|238958
NZ_CP014693.1\|WP_028236928.1\|6676313_6678179_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225822
NZ_CP014693.1\|WP_003202596.1\|6668208_6668889_-\|DUF2238-domain-containing-protein	unknown	unknown	gnl\|CDD\|378345
NZ_CP014693.1\|WP_003202589.1\|6673138_6673879_-\|response-regulator	unknown	unknown	gnl\|CDD\|181883
NZ_CP014693.1\|WP_027911912.1\|6675979_6676309_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP014693.1\|WP_003202591.1\|6671831_6673142_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP014693.1\|WP_003202593.1\|6670843_6671485_-\|ferric-reductase-like-transmembrane-domain-containing-protein	unknown	unknown	gnl\|CDD\|225338
NZ_CP014693.1\|WP_027911905.1\|6645229_6645808_+\|type-II-secretion-system-protein-M	unknown	unknown	gnl\|CDD\|377391
NZ_CP014693.1\|WP_013693533.1\|6674102_6674366_+\|DUF2790-domain-containing-protein	unknown	unknown	gnl\|CDD\|371321
NZ_CP014693.1\|WP_003202578.1\|6678521_6679595_+\|NAD(+)/NADH-kinase	unknown	unknown	gnl\|CDD\|225740
NZ_CP014693.1\|WP_003202598.1\|6665521_6668095_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|227334
NZ_CP014693.1\|WP_027911907.1\|6648304_6649723_+\|type-II-secretion-system-ATPase-GspE	unknown	unknown	gnl\|CDD\|131585
NZ_CP014693.1\|WP_060613926.1\|6651362_6652538_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270283
NZ_CP014693.1\|WP_039012217.1\|6681627_6682740_+\|acetoin-dehydrogenase-dihydrolipoyllysine-residue-acetyltransferase-subunit	unknown	unknown	gnl\|CDD\|184875

Protein	Function_ID	Function_description	E-value
NZ_CP014693.1\|WP_013693534.1\|6668900_6670700_-\|thiamine-pyrophosphate-requiring-protein	gnl\|CDD\|181344	PRK08273, PRK08273, thiamine pyrophosphate protein; Provisional.	0
NZ_CP014693.1\|WP_027911906.1\|6645804_6648165_+\|type-II-secretion-system-secretin-GspD	gnl\|CDD\|274175	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D. In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See ). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516). [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP014693.1\|WP_069971581.1\|6652749_6665373_+\|filamentous-haemagglutinin-family-protein	gnl\|CDD\|372178	pfam12545, DUF3739, Filamentous haemagglutinin family outer membrane protein. This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with pfam05860.	2.13491e-43
NZ_CP014693.1\|WP_027911911.1\|6674545_6675757_+\|cytochrome-c-biogenesis-protein-DipZ	gnl\|CDD\|239310	cd03012, TlpA_like_DipZ_like, TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.	6.87397e-77
NZ_CP014693.1\|WP_003202574.1\|6680611_6681628_+\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	3.65663e-180
NZ_CP014693.1\|WP_069971580.1\|6649722_6650934_+\|type-II-secretion-system-inner-membrane-protein-GspF	gnl\|CDD\|273980	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F. This membrane protein is a component of the terminal branch complex of the general secretion pathway (GSP), also known as the"Type II" secretion pathway. The GSP transports proteins (generally virulence-associated cell wall hydrolases) across the outer membrase of the bacterial cell. Transport across the inner membrane is often, but not exclusively handled by the Sec system. This model was constructed from the broader subfamily model, pfam00482 which includes components of pilin complexes (PilC) as well as other related genes. GspF is nearly always gene clustered with other GSP subunits. Some genes from Xylella and Xanthomonas strains score below the trusted cutoff due to excessive divergence from the family such that a sequence from Deinococcus which does not appear to be GspF scores higher. [Protein fate, Protein and peptide secretion and trafficking].	2.08348e-177
NZ_CP014693.1\|WP_003202577.1\|6679597_6680575_+\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	gnl\|CDD\|238958	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).	5.02301e-140
NZ_CP014693.1\|WP_028236928.1\|6676313_6678179_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225822	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].	0
NZ_CP014693.1\|WP_003202596.1\|6668208_6668889_-\|DUF2238-domain-containing-protein	gnl\|CDD\|378345	pfam09997, DUF2238, Predicted membrane protein (DUF2238). This domain, found in various hypothetical bacterial proteins, has no known function.	4.42254e-55
NZ_CP014693.1\|WP_003202589.1\|6673138_6673879_-\|response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	9.56171e-75
NZ_CP014693.1\|WP_003202591.1\|6671831_6673142_-\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.14771e-42
NZ_CP014693.1\|WP_003202593.1\|6670843_6671485_-\|ferric-reductase-like-transmembrane-domain-containing-protein	gnl\|CDD\|225338	COG2717, COG2717, Predicted membrane protein [Function unknown].	0.00433651
NZ_CP014693.1\|WP_027911905.1\|6645229_6645808_+\|type-II-secretion-system-protein-M	gnl\|CDD\|377391	pfam04612, T2SSM, Type II secretion system (T2SS), protein M. This family of membrane proteins consists of Type II secretion system protein M sequences from several Gram-negative (diderm) bacteria. The precise function of these proteins is unknown, though in Vibrio cholerae, the T2SM (EpsM) protein interacts with the T2SL (EpsL) protein, and also forms homodimers.	5.97687e-20
NZ_CP014693.1\|WP_013693533.1\|6674102_6674366_+\|DUF2790-domain-containing-protein	gnl\|CDD\|371321	pfam10976, DUF2790, Protein of unknown function (DUF2790). This family of proteins with unknown function appear to be restricted to Pseudomonadaceae.	5.04154e-19
NZ_CP014693.1\|WP_003202578.1\|6678521_6679595_+\|NAD(+)/NADH-kinase	gnl\|CDD\|225740	COG3199, COG3199, Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only].	1.51972e-60
NZ_CP014693.1\|WP_003202598.1\|6665521_6668095_-\|EAL-domain-containing-protein	gnl\|CDD\|227334	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms].	8.301e-82
NZ_CP014693.1\|WP_027911907.1\|6648304_6649723_+\|type-II-secretion-system-ATPase-GspE	gnl\|CDD\|131585	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E. This family describes GspE, the E protein of the type II secretion system, also called the main terminal branch of the general secretion pathway. This model separates GspE from the PilB protein of type IV pilin biosynthesis. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP014693.1\|WP_060613926.1\|6651362_6652538_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|270283	cd13565, PBP2_PstS, Substrate binding domain of ABC-type phosphate transporter, a member of the type 2 periplasmic-binding fold superfamily. This subfamily contians phosphate binding domain found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBPII superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.35853e-22
NZ_CP014693.1\|WP_039012217.1\|6681627_6682740_+\|acetoin-dehydrogenase-dihydrolipoyllysine-residue-acetyltransferase-subunit	gnl\|CDD\|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	0

>NZ_CP014693.1|WP_003202593.1|6670843_6671485_-|ferric-reductase-like-transmembrane-domain-containing-protein
MPTATASPFRYQGWSLFSLLAALVLLMTGLILVLNPDLTEGVRSAIRATARSSFILFLLAFTASAFAVLVPSPLSRSLVRERRFIGLAFAFSHLVHAVLIYSYGQLNPEFWPGRTTLGNVPGTVGYVFILLLALTSFKSTTRLIGFKAWKRLHVTGMWVLAAIFAYSNFKRIPMSAWYVLPFGLICAATAIRLVGKLAQATQRRQRPQHATDL
>NZ_CP014693.1|WP_013693534.1|6668900_6670700_-|thiamine-pyrophosphate-requiring-protein
MSMTVGDFLVERLYEWGVRRIYGYPGDGINGVFGALNRAQGKIRFIQARHEEMAAFMACAHAKFTGELGVCIATSGPGASHLVTGLYDARMDHMPVLAISGQQARAALGGHYQQELDLVSLFKDVAGAFVQQASVPAQVRHLLDRAVRTAVGERRVTALILPNDLQEMEYTAPRHKHGTVHSGVGYRKPSVVPYEEDLRKAAEVLNAGKKVAILVGAGALHATDEVIAIAEKLGAGVAKALLGKAAVPDDLPWVTGTIGLLGTEPSDNLMAGCDTLLMIGSGFPYAEFLPPEGQARGVQIDIQADMLSLRYPMEVNLHGDSVDTLRALLPLIEEKPDRTWRKKIEHWRERWERTLEKRARVSAKPINPQRVTFELSPRLPEHAIITCDSGSCANWYARDIKIRRGMMCSLSGGLASMGAAVPYAIAAKFCHPQRPVIALVGDGAMQMNNMAELITVAKYWRTWANGTWICAVFNNRDLNQVTWEQRVMEGDPKFAASQDIPDVPYHLFAESIGLKGILVLHEDDVATAWETALAADRPVLIEFRTDPDVPPLPPHIKLEQAKKFASTLLQGDPNERGIVVETAKQVLSSLLPGQRTDKE
>NZ_CP014693.1|WP_003202596.1|6668208_6668889_-|DUF2238-domain-containing-protein
MPTIELHRRYERSLLLAFCVVWGWLAIAPIKRSDWLAENLLVIALLVVLVTVHRRFSFSRLSATLLFVFLCIHEVGAHYTYAKVPYNQWWQALTGGQSLDQFMGFQRNQFDRLVHFSYGLLLAYPLREALLRVAPATGFRGYFLAWSLILASSAIYEIIEWLGGAYIGGDTAKAFVGAQQDPWDSQKDMALAALAAFMALLVAAGVSYLRQRDFALEWTLRFKART
>NZ_CP014693.1|WP_003202598.1|6665521_6668095_-|EAL-domain-containing-protein
MIEIAGNDSTVLSPGSPTRSFTRRTFPAIMLLLFVMSALAIAVLLNITGAQDRRAREQSLFFAQRAIEGIRKGIGRDLSDYSKWSDAYRHLHASVDKEWAYDQENVGSSVFSLYGYQAVFVISPTGQTVYSVIDGQMSEVDADTWLAGDLRALLKKASAAENHEEVVVEMLHHEDAPAFVAASAITVGTDSSVPEIPGPPSLMLFVKVLDPGALENLARDFALPDAHIARTPGPADTAQLQLDELTQEALAWRPQTPGQDLRKFLLPLLAVALLVLGILALAVLRHALAMLRAQERQYASLLAHRKALERSEERFRDIAEVSSDWLWEVDSTGTLTYLSERFDQVTGFSPTEWLGKPLHRLLHPHGGSISIAQWLLGGANSVSSAPLLCEYTARNQRIRTCKLSVRAIEAGTLGFRGTATDITDELRALAQIKHLSLHDPLTGLANRNRLFDCLREHLGRADRPPLALLNLDMDRFKPVNDSLGHAVGDKVLKEVAHILQQNVRGTDLVARLGGDEFVIVMPDPGDASDLDQLCARLIDCMQRPMHLDGNTLYLGVSIGVAWSQPGDERADELLRHADIALYAAKAAGRNTWRVYVEAMGNLARDRRRYEQQLRDAMQRDQLELRYLPRFDVSAEQLHGFEAQTFWHHPEKGELGGADFIPVAETSGQLEELGTWMLINVCEEAATWPSAVNVSIAVSPRWFNSSFLLNQVQEALETSGLAPHRLTLEVAEGVLLADHKTVASTLHALKDLGVRINIDKFGTSIASLREVLDQPFDGIRFDRNILTQLGLEDDKEGVLAMIRLSRSVGLMVTAEGIENARQFSQLRNVSCDHVQGPYFGAALARSEMASFFTTPRWL
>NZ_CP014693.1|WP_069971581.1|6652749_6665373_+|filamentous-haemagglutinin-family-protein
MLRCKPQTNLNAPRRDGELSMLRLKPLAQAIALLMVAGNAQAATAFSSAWFAAKGASQAGGAARPTTAQPGMPPPLAQQQRANAQLQRSLTNLNNTVAAIAAQQAAQAAGRQAALGQVQVVPDGLGEGGLKVDNSLTQGWLNAKGPQQTQTGGKTTVKIEQTADKAILNWETFNVGRNTTVDFQQQSDWAVLNRVNDPQARPSQIQGQIKGNGTVMLVNRNGIIFSGSSQVNVRNLAAVAANISDEQFSKRGLYVDATGSQPTFTDAAGKIEVQQGALIQTHRAATSTAGGGYALLLGSEVENAGSIITAKGQTTLAAGDSFYIRRGQGTSGNLRSTTRGNEVATSLKPGSSAGTVINSGLIQASTGDVTLTGHTVQQNGVAVASSSVDIRGAVHLLNASSDSSGSVILGQGSATAVLLDAAGGSALDSQRNAGPAGLDGTPNNLITGQFNNLSSVVDRSDQSRVEIVSGGSVDFQNGSITLATGGQVAVSAAGRSLVRDGAVIDVSGAIGVKVAMESNSIKVNVQGNEQRDAPVNREGGKLTNNDVWVDVRDLIYVPAGTNGYATDRWYTAGGLLEVGGYLGTRGHSAGEWAAQGGTLTFTGNDVVTQQAAQLNLSGGTLDVQSGYLRQSWLKGPNGRLYDLSKAPGDILYTGIYKGYEDHSQRWGQTDYYYNPLIAPRQRFEAGYTVGRDAGKLVVSTRNAVLEGQIVGEVYQGERQTQAPNLNLDGYQQSQNAVARRAQLWVGSYTPIYDKASGVINSALNPTLDQVTVGKVTEKIAAGLDLTSVVDTDRQGKLVLDNDLLNGFQLGAVKVAAAEGIKVDGTLKVADGGDITLYAPQVEVNADLTARSGRIALGNVLKQVRTDNFQMGDVVLSPVTGQRAVVTLGEGVTLNAAGRWSNLLLDGNDRQGLPFINGGTVSVRSGGDIDVGQGSLIDVSSGAAVMADGKTRGGKGGDLTLTAGLSASSGNGALNLDGELRGTGVSGGGTLKLAANKVLIGNSVEPLESDILQLGSDFFDKGFSAYDITGNEGLTVVDGTRVDVTMPVYRFGEQALSTGSGAEAADALQRWTPQLYQEDAIKGVLSQRRGASLSLTAGTENASAADMASTVLNLGKGSVISVDPGQGIDVRSIGQLTANGTLNAWGGRVSLNGLSVTGAGEGVNAQGHGRSIWLGEQALIDVSSRAVTAQDMRGQTYGLVRDGGQIVIGGQIDAAKGSAAASELFVVVRDGARLQADGSQAVLDIPGQGRTSVASSGGSISLASANGLYLDGDFSARSGGTGAAGGSLSVALETPYYRNDAVSDRVLQVRELVLGQNAQATLLGDTAETSADSLVYGHGRLGADQVQSGGFDSLALLSNGLLSVDGDVSLSLGQSLSLYARSFVTSANAPANTRVQLNASHVLLSGPAAGRPNPDGYTRPAVEGGGVSLLANKAKFSVNADLLDVQGSVIFSGKGMLRQADGRTVELERAGFDRVQLSSQGDLRFLAGFSGAYMPEGFTTQLLTPSDMILQAAQLYPATGVGARILAGYGWGTEPGSGMILYDPARSLVIGRTTQVAPQVPYSVFGRLQLGSAKIEQGGVVRAPLGLLEVGTNDSLAGVSARVDLLPGSLTSVSGLGLVLPYGGTVDGQSYQYAGKKVVLLGQGAATGNGDLSIGVILGGKSVAAQEGSVLDLSGGGELLGAGFISGRGGSTDARFNPLVQIGANGGFTLPGLSSNPVYAIVPGNRSQYAPVAPEGGAVDPRVGQQITIGAGVPGLAAGTYTLMPSTYALLPGAFRVEVNGLAGQGSTSSAQQMRNGSWTTAGVLSVANTGQRNSLSSQVILTSGDVLRRYSQYNETSYAQFAVADAARLGVPRALLPVDAKTLKLNLAKGTADQAFSFKGIGKFAPQTGGYGGTVAVVASNGTALEVVAEGRGATAGFEGVTLNAESLNALNASRQVIGGQFSVLYGQGGNYITPQRVSRSVALREGATLSAPEVFLLADGGELLVEQGAAINTIGRGKAAYDARDGFIYNLNVTFQNYSLLAASNGLLNVLAPVSGTSGTVNIGGCSLTPCSGVTRIHSEGSIVAASGSSLQLDDQVRYGTRHLTLALSNINVGTAQALSNAATRHVLPAGLTLSQTVLDRLLRGDTEYGAPALETLELSASQALNFYGTVSLDTYDPTTGKSRLNNLMLSTPAIYGAGTASDVATIRTANLIWNGAVGAPGSVIAGGAGTGAGRLDIQAQRIEFGYGEFAQPSSITTLDRLALGFANVNLSASERLTANHKGSLAVYQSQGAYDAKTGYAYGGGNLNILTPLLTGEAGSVNRITAGGAINVTGTTAKPGAVSGLGGELSLKGASLNLASAVMLPSGKLTLSATDDLTLVDEALIDVAGRTVTFNDVTRYSAGGEVILQSLNGNIRQADGSSIDLSARNNQAGRLSAVALDEGAGIVDLQGRILGSSTGEYDAGGTAMPYLAGGVEIQAQHLGGSGNLSEQFAALNQRLNDGQVFGSRGFQLKQGDLVIGNELKASTISVSVDNGNLLVNGKVDASGERVGSIRLAAGRSLTLGSNAVLDAHGNRLRVDSYGKIIDSPNRAMVDLTSRGGVLTVADGARIDLRHGTAAPAGQHDGRARGTLELNARRAGPDATHGDIAIDASGNLDIQGARSIAVNGMWQYSDADYGSDPAASGRPYQVIDQAYLDGKHLDSIAFINAALTNSDLMQRKLAGLNNARYADAFHLRPGVEIVSATADGDLVVQGDLDLSRYRYASVNPHTQKTDIYGSGEAGALTLRAGGDLSIYGSINDGFAPPPPTQDDKGWVLLPGIDFTGGDIVVPGAGVTLADGTAFPAGTTLNYDLPIKDVTLAAGTRLPVAAILKQPLELPAGTVLAAAVHDASGNLLFAAGTLLSRAQTLEPGSQLGAGSVLSGAAELRGFTWPKGVALPNVANAGNAQTNILKLEGSLVLNRGSLIPSGTDVKLPDGVESVQFRPEVAGSDGRMWAIAPMLAEGSQSWSLRLVAGADTTAADSRIVRPEPIHGDLRLADSHYGMFGVLVPGKGSLIWTEAGVEDMLNNGITVELGQPVDETIFRDIFGYESAEAFCADFGGNCTLQSSYKWTKSAEEQLANSGFEVKAGELISQAAAQFFKFDSVQSLCDAVPEVCTPADGEYKPVAGSVRPSVIRTGVGDLELLSGGSLRMDSLFGIYTAGTSSGPTFPGDPYNQPKALGSNDAVLNDADGSNEKLVDGGTESLYRAWYPDAGGNLLLKVGGDLSGNLTAPATPNGRPNPADKGQDSVNVGNWLWRQGNGNSLNGQPTAWWINFGSYTASTELGGADQMAGFTGFGTLGGGDLDVQVDGDAGVLNQLTGSDFSANINPRSQGLLLAVGSTGRVGADGSLQLTGGGDLNLRVGGALNPEGLFVSGHLNGAVINLRGHAQIDSGAIGRIDLQYGNAVAAQSPGETRAYDSFKSTRGFATGGLTLMPGDATFDLTTSGDLVVMDVADPGRAPMMSASRFKDGNTNGSGLSWFTLWTANTAVDLWSSGGNLTPFTFSTATDLAVVYPSILRAVAASGSLYYGKSSQLYDTGYKGDNRPALLLAPGINSELQFMAGDSIYGGDMSVSRSGAASTALATPLRPAFVGIVDGFIIKASNLSADGNLARPDANILPLFAFDTSSASSEWALNVDPARFYALEGDLLAVATGRSMTSVSTGRWPGRIAYEGAGPVRMMAGRDIVSSGIPLGGSLNENSDVGNYTSTGNLFIHNNPTDISIVSAGRDILYSTFNVAGPGLLEITAGRNILMDDKVSITSIGAVVPGDSRPGASLVLQAGAGLNGADYERFVKAYLDPANQALAGVPLANQDGKVAKTYEAELVDWLKERFGFSGDTEQARNFFAALPAEQQRVFARDVYFAELKAGGREYNEAGGVRQGSYLRGREAIDLLFPSKDVAGNAITYKGDITMFGGAGVHTDFGGSIQMLTPGGGQTFGIEGNAPPSTAGVITQGEGDIQLYAQNSILLGQSRIMTTFGGSILGWSAQGDINAGRGSKTTVVYTPPKRLYDTWGNVTLSPSVPSTGAGIATLNPIAEVAPGDIDLIAPLGTIDAGEAGIRVSGNVNIAALTVVNAANIQTQGKSTGVPLAASVNTGAITSASSAASSATQAAEDVARQQQNAARQNQASVFTVQVVSFGSEQLAPSRDGASREAPRAYDPASPVQVLGAGPLDEQSRQRLTEEERGRLSL
>NZ_CP014693.1|WP_060613926.1|6651362_6652538_+|substrate-binding-domain-containing-protein
MFKRNVLAVSLTLAGLCAAQAAMADVNGGGATLPQPLYQTSGVLTAGFAPYIGVGSGAGKSAFLTNDYTKFVPGDTSGKKVHWAGSDSKLSATELSTYVSAHGAAWGPLIQVPSVATSVAIPFNKTGTANVDLSVNQLCGVFSGRLTDWSQITGSGRTGAITVVYRAESSGTSELFTRFLNAKCAETGTFAITTNFASSYSGGLPASAVSATGSQAVMTALNAAQGRITYMSPDYAATTLAGLDDATKVARVAGVSPAPANVSAAIALVPVPAAANRADPNAWVPVFAATTNANDPSVVAYPTSGYPILGFTNVIFSQCYANAAQSTQVRDFFTRHYGAVAANNNDAAITANRFVPLPTTWKNAIRGSFLTTTSAQSIGNTNVCNGIGRPL
>NZ_CP014693.1|WP_069971580.1|6649722_6650934_+|type-II-secretion-system-inner-membrane-protein-GspF
MNRYRFEAADAQGKIESGHLEADSQGAAFNLLRSRGLTALQVQVERNTPPANGGGLFSAKLSDNDLAWATRQLASLLGASLPLEAALSATVEQAERKHIAQTLSAVRADVRSGMRLAEALAARPRDFPEIYRALIAAGEESGDLAQVMERLADYIEERNNLRGKILTAFIYPGVVGLVSVAIVIFLLSYVVPQVVSAFSQARQDLPALTVAMLTASDFIRAWXWLCFGVLAGGFWSWRMYLRKPAARLNWHARVLRLPLIGRFVLGLNTARFASTLAILGGAGVPLLRALEAARQTLSNDRLSQSVSEATAKVREGVNLAAALRVEKVFPPVLIHLIASGEKTGCLPPMLERAAQTLSRDIERRAMGMTALLEPLMIVVMGGVVLVIVMAVLLPIIEINQLVQ
>NZ_CP014693.1|WP_027911907.1|6648304_6649723_+|type-II-secretion-system-ATPase-GspE
MNTLPYAWAKAQRLVLRQSEEGAVLMVCPSTPGWSISEVRRQFGEVRLERVRDEELDGLLNSAYADTGSAAAVVGAAENEVDLDRLMQDIPEITDLLDTQDGAPVIRMINALLTQAARDEASDIHIEPYESHSVVRYRVDGTLRDVVSPRKALHGALVSRIKIMAQLDIAEKRLPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDKQAGRLQLETLGMDPDVLGKLDHLIRQPHGIVLVTGPTGSGKTTSLYAALARLDASVHNILTVEDPVEYDLPGISQIQVNAKIDMTFALALRAILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAVSAVNRLIDMGVEPFLLASSMLGVLAQRLVRRLCPQCKQPDPATPGTWRPVGCPSCNQTGYSGRTGIHELFCIDDDIRTLIHQGAGEQALRAAARRAGMFSMREDGERWVRSGTTAPEEILRVTRDA
>NZ_CP014693.1|WP_027911906.1|6645804_6648165_+|type-II-secretion-system-secretin-GspD
MKGARYPRHWRKAAPLLLLALSACNSTPPASQPPLLVDSELGIPLGSTQRSGDALLDRQRAQDLREHKPAVRHQVDLTARAREPRSTAPARTPLGDQPVTLNFVEADIQAVVRALSRSTGQQFLVDPRVKGNLTLVSEGPVPAHQAYDMLLAALRMQGFSVVDVGGVAQVVPEADAKLLGGPIYSADKPAGNGMLTRTFRLQYENAVNLIPVLRPIVSPNNPINAYPGNNTIVVTDYAENLSRVAQLIEGIDTPSAIDTDVVPIHNGIAVDIAQMVSDLLETQGGDQTQKINVIGDPRSNSIIIRAGSPERTELARNLIYKLDNAQNNPSNLHVVYLRNAQAGKLAQALRGLLTGESEGEGSDNSRSVLSGMGGNTNGQSGQSSSGDGTSSTTGGSASTSGNGYAQGSNGTTSASTKNEQGTAFSAGGVTIQADATTNTLLISAPDPLYRNLREVIDLLDQRRAQVVIESLIVEVGEDDASEFGVQWQTGNLGGSGVIGGVNLGGTGLNLNGKTSIDVLPQGLNLGVVNGTVDIPGIGKILDLKVLARALKSKGGTNVLSTPNLLTLDNEAASIFVGQTIPFVSGSYVTGGGGTSNNPFQTVTREEVGLKLNVRPQISEGGTVKLDIYQEVSSVDNRASSTTGIVTNKRAIDTSILLDDGQIMVLGGLLQDGYSQSNDAVPWLSTIPGIGALFRNERRQITKTNLMVFLRPYIIRDTAAGRGITLNRYDFMRRAQGLLQPERSWALPDMQAPQLPASARAIPGAAPVSLQAPRAVIKAVPVEGGTR
>NZ_CP014693.1|WP_027911905.1|6645229_6645808_+|type-II-secretion-system-protein-M
MNKQSLALAWGRWQACRTRLRTFWQELAVREQAAVALAALVLGGCLVWLALIQPPLKTIAYWQAETPKLRSQTEALEVLLRDVAGLAPDQPLEAALRQSLDASGLSEHYQLRAPDAERPNAWQLTFDQAPAEAVISWLLGNPRQFSLEVIEARLQRTALANPDNHDNDTDNTAGTLSGTVRMDQAQGAKEAS
>NZ_CP014693.1|WP_003202591.1|6671831_6673142_-|HAMP-domain-containing-protein
MSLPLRWPRTLASRLSLIFLIGLILAQGLSFGVQYYERYQSAKSTMLGNLETDVSTSVAILDRLPATERQAWLPKLARRNYGYLLDEGQSGQPMDLADAPISVSSIQEAIGQAYGLTFKQIPGPKMHYQAHLRLGDGSPLTIDVRPAMTPLSPWLPMVLLGQLALLIGCTWLAVRLAVGPLTRLAQAVETLDPNAHSVRLDEKGPTEVVHAAKAFNAMQDRIAAYLKERMQLLAAISHDLQTPITRMKLRAEFMDEGIERDKLWSDLSEMEHLVREGVAYARSIHGATEASCRISLDAFLDSLAFDYQDTGKDVQLTGKNAAVIDTRPHALRRVLVNLVDNALKFGGAAQIHVQIADNGQLAIQILDRGPGINEQELAEVLKPFYRVESSRNRETGGTGLGLAIAQQLAIAMGGSLTLSNRDGGGLCAELRLAFAS
>NZ_CP014693.1|WP_003202589.1|6673138_6673879_-|response-regulator
MDHVDHVLIVDDDREIRELVGNYLKKNGLRTTVVADGRQMRAFLETTPVDLIVLDIMMPGDDGLVLCRELRAGKHKATPVLMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTRMLPPNLVVTESGRLLAFGRWRLDTTARHLLDTDGTMVALSGAEYRLLRVFLDHPQRVLNRDQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDAREPAYIKTVRSEGYVFSLPVEILEASV
>NZ_CP014693.1|WP_013693533.1|6674102_6674366_+|DUF2790-domain-containing-protein
MNSKAIYAACLFAALNICTLSARAESNVQAQAYTYGTHLDIQKVLSLSEDAEPTCGVVNAQMTYLDSAGHKQALDYRKLSDNCNDGN
>NZ_CP014693.1|WP_027911911.1|6674545_6675757_+|cytochrome-c-biogenesis-protein-DipZ
MLLIAFLGGILTILSPCILPVVPFLFARADRSRGSVLLTLGGMVLTFALVSSLAVVSSEWVLRASSVGRQVALVVMVVFALSLIFSRVGTWLARPLVSLGNRLDAGAGRMAGPVASVLVGVATGLLWAPCAGPILGVILTGAMLQGASAQTSLLLLAYGLGSALSLGTLILAGRGLVGRLKLSLPITTWLRRGTGLAVLLAAVAIGTGADDRLLAATSSQQSASLEKSLLENVPKAIDYVVSKAGASSMPALESQGAMPALDGAVQWLNSPPLSSESLKGKVVLVDFWTYDCINCQHTLPYVNGWAKKYEKDGLVVIGVHTPEYGYEKIIDNVREQVRKLDIHYPVAIDNQYAIWRAFNNQYWPAHYFIDAKGQVRYSHFGEGRYGEQEQVIQQLLQEAKAGQ
>NZ_CP014693.1|WP_027911912.1|6675979_6676309_+|hypothetical-protein
MRISMWVVATFLLAAVSLEAQARALTQNQQSVCRWGSDIAAGAQASKLSGVSLYGARKKLQVRKFPRPWMRMTALGITEQTYNSASRLKPVAVKQTYYEQCVRHELARR
>NZ_CP014693.1|WP_028236928.1|6676313_6678179_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MLSAHSRAHVDCVSRVVKNANQLPQLPVPDLILDSWRRSMEQHHLDPGSLQGPRILSQDVLKQCRERSELFLNIASEEVARLHGRVRDADYCVLLTDAQGQTIDYRVETTIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTAKAPVTVHKRDHFRAAFIGLTCSAAPVFDPQGELLGVLDVSAVRSPDDRRSQHLIRQMVVQSAREIEQAFFMSSAQGYWVLRAHRNAGYVDSQPDFLFAWDDDGCLQALNPAARQYLLQHYGQLPQHIGQVFDQQLLHRARDESLCSLDHAMHGRLSAPRQRASSRSRVAMTPLEIDPRLADSLRLAVRVKDRNLPVLIQGETGSGKEVFARQLHQASQRRDRPFVALNCAAIPESLIESELFGYVAGAFTGASAKGMQGLLQQADGGTLFLDEIGDMPLALQTRLLRVLAEGEVAPLGASRRKAVDIQVICATHRDLETLVAAGEFREDLYFRLGGARFQLPPLRERSDRLALINRILAEESTLCGATVQLSSAALECLLGYHWPGNVRQLRHVLRYACAVCEASVVQLSHLPESMHRVDATDHGPEPSASPERQALLDALVRHRWKPTAAARALGISRATLYRRVNLHGIEMPGRSPA
>NZ_CP014693.1|WP_003202578.1|6678521_6679595_+|NAD(+)/NADH-kinase
MSRRPLTVGIIANPASGRDVRRLTANAGLFSSTDKVSVIQRLLAAFGATGIEQVLMPTDMIGMAAAVLKNSHSRQARSSHWPALEFLDLTLRQTVEDTRRAARLMAEREVALIAVLGGDGTHKAVAAEVGDIPLLTLSTGTNNAFPELREATSAGLAGGLYASGRIPDSIGLRRNKRLLVCDAGRGLREVALVDVAVSPLRFVGARAISRAQDLAEVFVTFAEPQSIGLSALCGLWFPVSRQAPGGAWMRLDPQSPEALLVPLAPGLLQGCGVLAAGPLEPGIAHGLSLSSGTLALDGEREIEFNARDRPTVTLDAGGPLSIDVNAVLAYAAQHRLLAIGREHPQHPLNLQEDTPGE
>NZ_CP014693.1|WP_003202577.1|6679597_6680575_+|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha
MSTPLTHDQLLHAYQVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLGDDDCIASNHRGHGHCIAKGVDVYGMMAEIYGKKTGVCQGKGGSMHIADFEKGMLGANGIVGAGAPLVVGAALAARLKGTDSVAVVFFGDGGSNEGAVFEAMNMASVWNLPCLFIAENNGYAEATASNWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAVERARAGEGPSLIEVKLTRYYGHFEGDAQTYRAPDEVKHFRENQDCLMQFRERTTRAGLLTVEQLDQIDKEVDMLIENAVNKAKSDPKPTAADLLTDVYVSYP
>NZ_CP014693.1|WP_003202574.1|6680611_6681628_+|alpha-ketoacid-dehydrogenase-subunit-beta
MARKISYQQAINEALAQEMRRDPSVFIMGEDVAGGAGAPGENDAWGGVLGVTKGLYAQFPGRVLDTPLSEIGYVGAAVGAATCGVRPVCELMFVDFAGCCLDQILNQAAKFRYMFGGKASTPLVIRTMVGAGLRAAAQHSQMLTSLWTHIPGLKVVCPSSPYDAKGLLIQAIRDNDPVIFCEHKLLYSMQGEVPEELYTIPFGEANFLRDGKDVTLVSYGRTVNTAMDAARSLAGRGIDCEVIDLRTTSPLDEDSILESVEKTGRLVVIDEANPRCSMATDISALVAQKAFGALKAPIEMVTAPHTPVPFSDSLEDLYIPDAAKIEQAVLNVIEWSKR
>NZ_CP014693.1|WP_039012217.1|6681627_6682740_+|acetoin-dehydrogenase-dihydrolipoyllysine-residue-acetyltransferase-subunit
MSQIHTLTMPKWGLSMTEGRVDAWLKEEGQAITKGDEVMDVETDKISSSVEAPFSGILRRQIARQDETLAVGALLGIVVDGDASEAEIDAVIEQFQSTFVPGDAADEDSGPKPQKVELDGRVIRYFERGEGGTPLLLVHGFGGDLNNWLFNHEALAAGRRVIALDLPGHGESSKTLQRGDLDELSGVVLALLDHLDINAAHLVGHSMGGAVSLNAARLMPQRVRSLTLIGSAGLGAEINGSYLQGFVEAANRNALKPQLVQLFSNAELVNRQMLDDMLKYKRLEGVDAALQQLSATLFADGRQQMDLREVVQAGDVPSLVIWGSDDAIIPAVHSEGLRAQVEVLSGQGHMVQMEAAEQVNRLILGFIEQH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP014693_2	2.1\|1767188\|20\|NZ_CP014693\|CRISPRCasFinder	1767188-1767207	20	NZ_CP014693.1	1767223-1767242	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	4266304-4266339	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	4794682-4794717	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	5184685-5184720	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	5684400-5684435	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	6545586-6545621	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	2772315-2772350	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	4309488-4309523	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	4638533-4638568	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	5185544-5185579	0	1.0
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	5999975-6000010	0	1.0
NZ_CP014693_5	5.1\|2555839\|43\|NZ_CP014693\|CRISPRCasFinder	2555839-2555881	43	NZ_CP014693.1	2770220-2770262	1	0.977
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	5684312-5684347	1	0.972
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	6248670-6248705	1	0.972
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	6248743-6248778	1	0.972
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	87597-87632	1	0.972
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	2770185-2770220	1	0.972
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	4309400-4309435	1	0.972
NZ_CP014693_5	5.1\|2555839\|43\|NZ_CP014693\|CRISPRCasFinder	2555839-2555881	43	NZ_CP014693.1	4309435-4309477	2	0.953
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	4339161-4339196	2	0.944
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	4339233-4339268	2	0.944
NZ_CP014693_7	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	NZ_CP014693.1	5888525-5888560	2	0.944

1. spacer 2.1|1767188|20|NZ_CP014693|CRISPRCasFinder matches to position: 1767223-1767242, mismatch: 0, identity: 1.0

atttgctgccacagggggac	CRISPR spacer
atttgctgccacagggggac	Protospacer
********************

2. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 4266304-4266339, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

3. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 4794682-4794717, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

4. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 5184685-5184720, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

5. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 5684400-5684435, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

6. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 6545586-6545621, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

7. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 2772315-2772350, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

8. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 4309488-4309523, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

9. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 4638533-4638568, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

10. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 5185544-5185579, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

11. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 5999975-6000010, mismatch: 0, identity: 1.0

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtcaggccgcctcgcgagcaagctttgctcccacag	Protospacer
************************************

12. spacer 5.1|2555839|43|NZ_CP014693|CRISPRCasFinder matches to position: 2770220-2770262, mismatch: 1, identity: 0.977

ggtcctgctcaaacagatctgatgggtgtacgaccgggagaac	CRISPR spacer
ggtcctgctcaaacagatctgatgggtgtacgaccaggagaac	Protospacer
***********************************.*******

13. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 5684312-5684347, mismatch: 1, identity: 0.972

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtaaggccgcctcgcgagcaagctttgctcccacag	Protospacer
** *********************************

14. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 6248670-6248705, mismatch: 1, identity: 0.972

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gttaggccgcctcgcgagcaagctttgctcccacag	Protospacer
**.*********************************

15. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 6248743-6248778, mismatch: 1, identity: 0.972

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gttaggccgcctcgcgagcaagctttgctcccacag	Protospacer
**.*********************************

16. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 87597-87632, mismatch: 1, identity: 0.972

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtaaggccgcctcgcgagcaagctttgctcccacag	Protospacer
** *********************************

17. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 2770185-2770220, mismatch: 1, identity: 0.972

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtaaggccgcctcgcgagcaagctttgctcccacag	Protospacer
** *********************************

18. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 4309400-4309435, mismatch: 1, identity: 0.972

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtgaggccgcctcgcgagcaagctttgctcccacag	Protospacer
** *********************************

19. spacer 5.1|2555839|43|NZ_CP014693|CRISPRCasFinder matches to position: 4309435-4309477, mismatch: 2, identity: 0.953

ggtcctgctcaaacagatctgatgggtgtacgaccgggagaac	CRISPR spacer
ggtcctgctcaaacagatctgattgatgtacgaccgggagaac	Protospacer
*********************** *.*****************

20. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 4339161-4339196, mismatch: 2, identity: 0.944

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtaaggccgtctcgcgagcaagctttgctcccacag	Protospacer
** ******.**************************

21. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 4339233-4339268, mismatch: 2, identity: 0.944

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtaaggccgtctcgcgagcaagctttgctcccacag	Protospacer
** ******.**************************

22. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to position: 5888525-5888560, mismatch: 2, identity: 0.944

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtaaggccgcctcgcgcgcaagctttgctcccacag	Protospacer
** ************* *******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1563606 : 1649035

uncultured_Caudovirales_phage(48.89%)

portal,protease,tail,holin,integrase,capsid,tRNA,plate,terminase,head,lysis

attL 1576612:1576641|attR 1650232:1650261

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003183176.1\|1563606_1564890_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.1e-138	59.5
WP_003199862.1\|1565002_1565638_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.0e-61	61.7
WP_003199860.1\|1565731_1567042_-	trigger factor	NA	NA	NA	NA
WP_003199858.1\|1568082_1568937_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.1e-29	33.6
WP_003199856.1\|1569247_1570186_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
WP_027912605.1\|1570359_1570554_-	hypothetical protein	NA	NA	NA	NA
WP_069970975.1\|1570655_1571333_-	hypothetical protein	NA	NA	NA	NA
WP_003199851.1\|1571556_1571721_+	hypothetical protein	NA	NA	NA	NA
WP_069970976.1\|1571791_1572541_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	7.8e-40	38.6
WP_003199848.1\|1572567_1572819_-	hypothetical protein	NA	NA	NA	NA
WP_003199846.1\|1572958_1573855_+	transcriptional activator NhaR	NA	NA	NA	NA
WP_003199844.1\|1573851_1575003_-	MFS transporter	NA	NA	NA	NA
WP_003199842.1\|1575286_1576519_+	serine/threonine transporter SstT	NA	NA	NA	NA
1576612:1576641	attL	NA	NA	NA	NA
WP_003199840.1\|1576729_1577239_-	DUF1993 domain-containing protein	NA	NA	NA	NA
WP_013692649.1\|1577369_1578017_+	DUF480 domain-containing protein	NA	NA	NA	NA
WP_027912606.1\|1578023_1578845_-	shikimate 5-dehydrogenase	NA	NA	NA	NA
WP_003199833.1\|1579107_1579461_+	hypothetical protein	NA	NA	NA	NA
WP_013692648.1\|1579536_1581057_-	purine permease	NA	NA	NA	NA
WP_003199829.1\|1581180_1582005_-	arylamine N-acetyltransferase	NA	NA	NA	NA
WP_069970977.1\|1582120_1582915_-	exodeoxyribonuclease III	NA	NA	NA	NA
WP_038856250.1\|1582984_1585561_-	EAL domain-containing protein	G3MA91	Bacillus_virus	2.5e-21	32.4
WP_003199824.1\|1585766_1587338_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_069970978.1\|1587540_1588200_-	ribonuclease T2	NA	NA	NA	NA
WP_013692645.1\|1588396_1589755_+	chromate efflux transporter	A0A219VHC2	Ochrobactrum_phage	4.7e-27	58.5
WP_069971612.1\|1589751_1590183_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069970979.1\|1590318_1590807_+	hypothetical protein	NA	NA	NA	NA
WP_069971613.1\|1590837_1591218_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003199813.1\|1591314_1591722_+	DoxX family protein	NA	NA	NA	NA
WP_013692642.1\|1591734_1592952_-	MFS transporter	NA	NA	NA	NA
WP_027912614.1\|1593203_1594253_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	6.8e-74	44.8
WP_069970980.1\|1594439_1595348_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_069970981.1\|1595352_1596849_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
WP_069970982.1\|1596859_1598155_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_069970983.1\|1598337_1599285_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_069970984.1\|1599295_1600147_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_069970985.1\|1600154_1600442_-	metal-sensing transcriptional repressor	NA	NA	NA	NA
WP_018610006.1\|1600824_1601100_-	hypothetical protein	NA	NA	NA	NA
WP_003199786.1\|1601610_1601781_+	hypothetical protein	NA	NA	NA	NA
WP_069970986.1\|1601780_1602380_+	putative adenosine monophosphate-protein transferase Fic	NA	NA	NA	NA
WP_069970987.1\|1602472_1603195_+	metallophosphoesterase	A0A291L9W7	Bordetella_phage	8.6e-44	40.9
WP_069970988.1\|1604311_1606003_+	AAA family ATPase	Q2P9X8	Enterobacteria_phage	3.3e-131	47.8
WP_155772341.1\|1605999_1607001_+	hypothetical protein	Q2P9X7	Enterobacteria_phage	2.2e-66	40.2
WP_069970989.1\|1607146_1608067_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_069970990.1\|1608101_1609379_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	6.5e-111	50.1
WP_041476085.1\|1609371_1609797_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	5.3e-17	43.0
WP_069970991.1\|1609896_1610598_+	SOS response-associated peptidase family protein	A0A2H4J5W2	uncultured_Caudovirales_phage	1.9e-56	48.7
WP_155772342.1\|1610594_1610786_-	hypothetical protein	NA	NA	NA	NA
WP_069970993.1\|1610869_1611664_-	DNA adenine methylase	C7BGE1	Burkholderia_phage	1.6e-99	65.4
WP_069970994.1\|1611813_1612353_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	4.6e-50	66.1
WP_069970995.1\|1612334_1612898_-	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	3.5e-77	75.9
WP_069970996.1\|1612964_1614011_-	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	7.3e-145	73.0
WP_053124044.1\|1614074_1614281_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	1.7e-21	70.1
WP_069970997.1\|1615109_1617743_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	5.9e-66	36.2
WP_069970998.1\|1617842_1618169_-\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	1.6e-18	47.6
WP_069970999.1\|1618240_1618750_-\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	5.6e-66	70.1
WP_069971000.1\|1618762_1619926_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	3.6e-185	82.6
WP_069971001.1\|1620013_1620433_-\|tail	phage tail protein	Q9ZXK5	Pseudomonas_virus	5.5e-27	55.0
WP_069971003.1\|1622408_1623011_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	2.0e-78	69.2
WP_069971004.1\|1623007_1623892_-\|plate	baseplate J/gp47 family protein	A0A2H4JFK9	uncultured_Caudovirales_phage	7.6e-111	70.3
WP_069971005.1\|1623888_1624215_-	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.4e-33	65.7
WP_069971006.1\|1624219_1624468_-	hypothetical protein	A0A2H4J885	uncultured_Caudovirales_phage	1.1e-11	56.1
WP_069971007.1\|1624527_1625091_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	2.5e-59	60.1
WP_069971008.1\|1625087_1625612_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.7e-46	54.1
WP_053124065.1\|1625604_1626267_-	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	3.7e-78	66.1
WP_069971009.1\|1626263_1626578_-	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	4.0e-30	58.7
WP_069971010.1\|1626580_1627576_-\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	6.1e-165	85.2
WP_069971011.1\|1627636_1627846_-	hypothetical protein	NA	NA	NA	NA
WP_069971012.1\|1627892_1628237_-\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	2.2e-42	78.9
WP_069971013.1\|1628233_1629394_-\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	7.6e-151	76.3
WP_069971014.1\|1629390_1630872_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	7.5e-244	85.0
WP_014339651.1\|1630871_1631078_-	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	4.0e-23	79.4
WP_069971015.1\|1631079_1633092_-\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	0.0e+00	84.2
WP_069971016.1\|1633096_1633657_-\|terminase	terminase small subunit	A0A2H4JG15	uncultured_Caudovirales_phage	1.6e-58	65.1
WP_046047803.1\|1633820_1634165_-\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	3.3e-46	84.3
WP_069971017.1\|1634691_1635057_-	hypothetical protein	NA	NA	NA	NA
WP_069971018.1\|1635049_1637266_-	conjugal transfer protein TraC	A0A2D1GN57	Marinobacter_phage	3.2e-190	47.2
WP_046047806.1\|1637255_1637483_-	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	1.5e-07	42.7
WP_069971019.1\|1637475_1637994_-	hypothetical protein	NA	NA	NA	NA
WP_081339730.1\|1638325_1638583_-	hypothetical protein	A0A0D4DBS7	Acinetobacter_phage	6.4e-10	46.2
WP_069971021.1\|1638662_1639388_+	peptidase S24	A5VW98	Enterobacteria_phage	1.1e-25	37.8
WP_069971022.1\|1639681_1640272_+	hypothetical protein	NA	NA	NA	NA
WP_069971023.1\|1640281_1640566_+	phage antirepressor KilAC domain-containing protein	NA	NA	NA	NA
WP_172831538.1\|1640591_1640732_+	hypothetical protein	NA	NA	NA	NA
WP_069971024.1\|1640724_1641033_+	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_069971025.1\|1641129_1641549_+	hypothetical protein	NA	NA	NA	NA
WP_069971026.1\|1641545_1641767_+	hypothetical protein	NA	NA	NA	NA
WP_069971027.1\|1641856_1642153_+	hypothetical protein	NA	NA	NA	NA
WP_069971028.1\|1642149_1642416_+	pyocin activator PrtN family protein	A0A2K8HN48	Pseudomonas_phage	3.5e-19	58.8
WP_155772343.1\|1642447_1645393_-	NACHT domain-containing protein	NA	NA	NA	NA
WP_081339731.1\|1645398_1646781_-	hypothetical protein	NA	NA	NA	NA
WP_069971029.1\|1646824_1647913_-\|integrase	site-specific integrase	L7TP61	Pseudomonas_virus	7.6e-153	72.7
WP_069971030.1\|1648015_1649035_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
1650232:1650261	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2398269 : 2477737

Pseudomonas_phage(66.67%)

protease,tail,holin,tRNA,bacteriocin,plate,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003198389.1\|2398269_2399985_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_003198388.1\|2400002_2400956_+	hypothetical protein	NA	NA	NA	NA
WP_003198386.1\|2401112_2402174_-	DNA polymerase IV	NA	NA	NA	NA
WP_003198384.1\|2402999_2405642_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_039010734.1\|2405641_2406931_+	virulence factor family protein	NA	NA	NA	NA
WP_003198381.1\|2407192_2409094_-	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	1.3e-78	34.9
WP_003198379.1\|2409367_2410708_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_003198377.1\|2410936_2411410_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003198375.1\|2411493_2412204_+	RNA-binding protein S4	NA	NA	NA	NA
WP_003198373.1\|2412261_2412723_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.4e-36	50.0
WP_003198370.1\|2412728_2413427_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_003198368.1\|2413636_2414416_-	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_003198364.1\|2414537_2415464_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003184792.1\|2415468_2415831_-	diacylglycerol kinase	NA	NA	NA	NA
WP_003198362.1\|2415903_2416557_-	response regulator transcription factor	NA	NA	NA	NA
WP_003198361.1\|2416770_2417517_-	DTW domain-containing protein	NA	NA	NA	NA
WP_069971118.1\|2417701_2418124_+	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA
WP_003198357.1\|2418124_2418319_-	hypothetical protein	NA	NA	NA	NA
WP_003198355.1\|2418784_2419903_+	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_003198353.1\|2419948_2420416_-	recombination regulator RecX	NA	NA	NA	NA
WP_003198351.1\|2420424_2421477_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.9e-109	61.4
WP_003198349.1\|2421560_2422061_-	CinA family protein	B5TK85	Pseudomonas_phage	3.9e-88	100.0
WP_060613440.1\|2422132_2422669_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	2.1e-87	98.9
WP_003198344.1\|2422650_2423214_-	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	1.2e-104	100.0
WP_069971119.1\|2423238_2423685_-	hypothetical protein	B5TK82	Pseudomonas_phage	1.1e-36	57.3
WP_069971120.1\|2423685_2424582_-\|tail	phage tail protein	B5TK81	Pseudomonas_phage	5.6e-69	53.4
WP_028237193.1\|2424693_2425254_-\|tail	tail fiber assembly protein	B5TK80	Pseudomonas_phage	2.9e-108	100.0
WP_069971121.1\|2425261_2426356_-\|tail	phage tail protein	B5TK79	Pseudomonas_phage	1.4e-207	99.7
WP_003198332.1\|2426383_2426893_-	hypothetical protein	B5TK78	Pseudomonas_phage	1.3e-86	100.0
WP_069971122.1\|2426889_2428044_-\|tail	phage tail protein	B5TK77	Pseudomonas_phage	2.1e-217	99.5
WP_003198328.1\|2428055_2428655_-	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	8.5e-114	100.0
WP_069971123.1\|2428642_2429683_-\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	3.5e-187	98.3
WP_003198324.1\|2429672_2430071_-	phage GP46 family protein	B5TK74	Pseudomonas_phage	1.2e-71	100.0
WP_003198323.1\|2430070_2430580_-\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	4.4e-87	99.4
WP_013692396.1\|2430979_2432020_-	hypothetical protein	B5TK72	Pseudomonas_phage	9.1e-196	99.7
WP_013692395.1\|2432023_2433262_-	DNA circularization N-terminal domain-containing protein	B5TK71	Pseudomonas_phage	1.0e-230	99.8
WP_003198318.1\|2433248_2434823_-	hypothetical protein	B5TK70	Pseudomonas_phage	1.4e-171	100.0
WP_003198316.1\|2434953_2435250_-\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	1.1e-45	100.0
WP_003198314.1\|2435246_2435594_-\|tail	phage tail tube protein	B5TK68	Pseudomonas_phage	5.7e-62	100.0
WP_003198312.1\|2435660_2437157_-\|tail	phage tail sheath subtilisin-like domain-containing protein	B5TK67	Pseudomonas_phage	4.2e-279	100.0
WP_003198311.1\|2437156_2437339_-	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	6.3e-28	100.0
WP_003198309.1\|2437335_2437920_-	hypothetical protein	B5TK65	Pseudomonas_phage	3.7e-106	100.0
WP_147282110.1\|2439194_2439608_-	hypothetical protein	B5TK63	Pseudomonas_phage	6.6e-65	100.0
WP_003198305.1\|2439748_2440564_-\|bacteriocin	lipid II-degrading bacteriocin	B5TK62	Pseudomonas_phage	6.7e-154	100.0
WP_080684706.1\|2440565_2440880_-	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	2.4e-06	77.4
WP_003198302.1\|2440788_2441139_-\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	1.4e-60	100.0
WP_028237203.1\|2441205_2441787_-	DUF642 domain-containing protein	NA	NA	NA	NA
WP_080684707.1\|2441825_2441984_-	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	6.0e-19	93.8
WP_039012729.1\|2442444_2443179_-	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	2.0e-136	99.2
WP_069971124.1\|2443727_2444081_+	hypothetical protein	B5TK57	Pseudomonas_phage	6.2e-56	97.4
WP_167331288.1\|2444834_2447402_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-26	23.0
WP_003198291.1\|2447544_2447868_+	ferredoxin family protein	NA	NA	NA	NA
WP_003198289.1\|2449301_2450309_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.6e-34	35.8
WP_003198287.1\|2450415_2451261_-	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	8.3e-06	33.3
WP_170862085.1\|2451472_2452108_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.1e-41	49.3
WP_003198282.1\|2452149_2452899_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.2e-68	52.6
WP_028237206.1\|2452886_2453945_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_003184863.1\|2453941_2454415_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_003198277.1\|2454458_2455304_-	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_003198276.1\|2455312_2456425_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	3.1e-32	29.3
WP_013692389.1\|2456532_2457429_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003198271.1\|2457596_2458304_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_003184873.1\|2458300_2458579_-	cell division protein FtsB	NA	NA	NA	NA
WP_013692387.1\|2458750_2460040_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	7.7e-136	59.0
WP_003198268.1\|2460201_2461047_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	2.3e-48	42.4
WP_003198266.1\|2461051_2462683_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.0e-156	53.1
WP_013692386.1\|2462957_2464286_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_003198261.1\|2464419_2465367_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_003198259.1\|2465516_2469038_-	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	1.3e-198	36.5
WP_013692385.1\|2469221_2469866_-	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	3.8e-27	39.2
WP_003198254.1\|2469862_2470993_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_003198252.1\|2470995_2471772_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_003184897.1\|2471768_2472209_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_003198250.1\|2472314_2473370_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_003184901.1\|2473373_2473877_-	OmpH family outer membrane protein	NA	NA	NA	NA
WP_039010695.1\|2473922_2476310_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_027913160.1\|2476384_2477737_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA

DBSCAN-SWA_3

3848932 : 3924028

Tupanvirus(28.57%)

protease,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069971284.1\|3848932_3850894_+\|protease	protease modulator HflK	NA	NA	NA	NA
WP_003207028.1\|3850890_3851931_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_003207022.1\|3851927_3852980_+\|protease	protease modulator HflK	NA	NA	NA	NA
WP_027912853.1\|3852976_3854896_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.0e-48	28.3
WP_003207018.1\|3855081_3856269_+	class I SAM-dependent methyltransferase	A0A2K9L0U7	Tupanvirus	3.6e-39	34.4
WP_003207017.1\|3856265_3857705_-	cardiolipin synthase	NA	NA	NA	NA
WP_003207015.1\|3857847_3858369_+	DUF3617 domain-containing protein	NA	NA	NA	NA
WP_003207014.1\|3858494_3859370_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_060614250.1\|3859380_3860247_-	metal ABC transporter permease	NA	NA	NA	NA
WP_003207009.1\|3860246_3860915_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_003207007.1\|3860911_3861808_-	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_069971285.1\|3862461_3863670_+	GTP-binding protein	NA	NA	NA	NA
WP_033028165.1\|3863669_3864320_+	DUF1826 domain-containing protein	NA	NA	NA	NA
WP_003207001.1\|3864316_3864670_-	hypothetical protein	NA	NA	NA	NA
WP_003207000.1\|3864697_3865663_+	cobalamin biosynthesis protein CobW	NA	NA	NA	NA
WP_013694603.1\|3865675_3866098_-	DUF3301 domain-containing protein	NA	NA	NA	NA
WP_003206995.1\|3866217_3867090_+	pyridoxal kinase PdxY	NA	NA	NA	NA
WP_003206993.1\|3867139_3867625_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003206991.1\|3867903_3869667_+	cation:proton antiporter	NA	NA	NA	NA
WP_003187120.1\|3869680_3870088_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_013694601.1\|3870228_3871104_-	Tim44 domain-containing protein	NA	NA	NA	NA
WP_069971286.1\|3871333_3873517_-	DNA helicase II	A7KV33	Bacillus_phage	1.4e-118	37.5
WP_027912848.1\|3873778_3876652_+	EAL domain-containing protein	NA	NA	NA	NA
WP_003187110.1\|3876975_3877842_+	transcriptional regulator HexR	NA	NA	NA	NA
WP_013694599.1\|3878004_3878214_+	hypothetical protein	NA	NA	NA	NA
WP_013694598.1\|3878155_3879118_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003206982.1\|3879305_3880721_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_003206980.1\|3880733_3882542_+	sodium-extruding oxaloacetate decarboxylase subunit alpha	NA	NA	NA	NA
WP_069971287.1\|3882605_3884630_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_003206976.1\|3884912_3885746_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003206974.1\|3885742_3886564_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003206973.1\|3886677_3887577_+	homocysteine S-methyltransferase family protein	NA	NA	NA	NA
WP_069971288.1\|3887850_3893166_+	hypothetical protein	NA	NA	NA	NA
WP_003206968.1\|3893325_3893997_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013694592.1\|3894007_3894454_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003206964.1\|3894456_3895098_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
WP_003206962.1\|3895198_3896743_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_069971289.1\|3896779_3901381_-	hypothetical protein	NA	NA	NA	NA
WP_013694590.1\|3901626_3902727_-	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_069971290.1\|3902738_3903770_-	histone deacetylase family protein	A0A2K9L0J7	Tupanvirus	4.0e-34	35.5
WP_080587866.1\|3903935_3904532_-	hypothetical protein	NA	NA	NA	NA
WP_013694587.1\|3904595_3905624_-	hypothetical protein	NA	NA	NA	NA
WP_013694586.1\|3905745_3906312_-	hypothetical protein	NA	NA	NA	NA
WP_038858168.1\|3907405_3907792_+	hypothetical protein	NA	NA	NA	NA
WP_038858169.1\|3908087_3908708_+	hypothetical protein	NA	NA	NA	NA
WP_043042233.1\|3909173_3909533_-	hypothetical protein	B5TK57	Pseudomonas_phage	3.6e-27	58.8
WP_043042232.1\|3910138_3912322_-	lipase family protein	Q58MF5	Prochlorococcus_phage	3.8e-10	33.3
WP_043042242.1\|3912334_3913108_-	hypothetical protein	NA	NA	NA	NA
WP_027912838.1\|3913140_3913911_-	hypothetical protein	NA	NA	NA	NA
WP_027912837.1\|3913907_3914762_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_043042231.1\|3914758_3916822_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.4e-29	25.7
WP_069971291.1\|3917253_3918810_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_053163654.1\|3918842_3919346_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_069971292.1\|3919371_3920847_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_027912832.1\|3920855_3921266_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_069971293.1\|3921272_3923060_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_027912830.1\|3923023_3924028_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_4

4328306 : 4384135

Burkholderia_phage(28.57%)

holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027912932.1\|4328306_4330010_-\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	5.0e-50	29.9
WP_003206360.1\|4330157_4331630_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_003206359.1\|4331709_4332330_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_003206357.1\|4332642_4333821_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.9e-26	37.6
WP_003206355.1\|4333817_4334663_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_003206353.1\|4334734_4335682_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_028237464.1\|4336106_4337483_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_013694424.1\|4337997_4339101_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_003206350.1\|4339521_4339785_-	hypothetical protein	NA	NA	NA	NA
WP_069971330.1\|4340164_4341328_-	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA
WP_027912933.1\|4341348_4341825_-	thioesterase family protein	NA	NA	NA	NA
WP_003206344.1\|4341954_4342920_-	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_014340599.1\|4343079_4343967_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_013694418.1\|4344038_4344983_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_069971331.1\|4345169_4346129_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_003206338.1\|4346197_4347382_+	hypothetical protein	NA	NA	NA	NA
WP_038855930.1\|4347557_4347974_-	DUF3010 family protein	NA	NA	NA	NA
WP_013694416.1\|4348006_4348330_-	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	8.3e-31	67.6
WP_003206334.1\|4348313_4348568_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	1.1e-22	60.7
WP_069971332.1\|4348656_4349058_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_003206328.1\|4349293_4350271_+	membrane dipeptidase	NA	NA	NA	NA
WP_003177589.1\|4350351_4350882_+	hypothetical protein	NA	NA	NA	NA
WP_003206325.1\|4350897_4352958_+	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_003206324.1\|4353128_4355078_+	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_069971333.1\|4355077_4356298_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_003206321.1\|4356311_4357082_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_069971334.1\|4358203_4361656_+	GMC family oxidoreductase N-terminal domain-containing protein	NA	NA	NA	NA
WP_003206319.1\|4361802_4363671_+	hypothetical protein	NA	NA	NA	NA
WP_060614196.1\|4363698_4364943_+	hypothetical protein	NA	NA	NA	NA
WP_003206316.1\|4365062_4366358_-	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_003206314.1\|4366641_4367742_+	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_003206313.1\|4367956_4368997_-	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_003206311.1\|4369231_4369936_+	conjugal transfer protein TraX	NA	NA	NA	NA
WP_003206308.1\|4370251_4371505_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	2.5e-99	52.7
WP_003206307.1\|4371526_4372777_+	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_003206305.1\|4372791_4373121_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_003206303.1\|4373117_4376135_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_003206301.1\|4376295_4376928_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_003206299.1\|4377110_4377968_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_003206297.1\|4378149_4379349_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	2.9e-12	29.7
WP_003206294.1\|4379452_4379665_-	cold shock domain-containing protein	A0A2H4N7Y6	Lake_Baikal_phage	7.9e-14	57.8
WP_027912940.1\|4380024_4380597_-	hypothetical protein	NA	NA	NA	NA
WP_003206290.1\|4380702_4381125_-	DUF3757 domain-containing protein	NA	NA	NA	NA
WP_069971628.1\|4381424_4382003_+	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_003206286.1\|4382043_4382385_-	hypothetical protein	NA	NA	NA	NA
WP_003206284.1\|4382555_4383449_-	acyltransferase	NA	NA	NA	NA
WP_003206282.1\|4383628_4384135_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA

DBSCAN-SWA_5

6264466 : 6270732

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003203323.1\|6264466_6265747_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.4e-99	54.2
WP_003203321.1\|6265747_6267142_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_038855926.1\|6267261_6268266_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003203316.1\|6268354_6269356_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	4.8e-162	83.2
WP_003203314.1\|6269352_6269688_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.0e-44	80.2
WP_003203312.1\|6269684_6269978_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	6.3e-30	66.7
WP_028237175.1\|6269977_6270340_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	4.4e-41	70.8
WP_013693700.1\|6270339_6270732_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	4.2e-53	79.8

Anti-CRISPR protein detection

Acr_ID: NZ_CP014693.1|WP_003206334.1|4348313_4348568_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP014693.1|WP_003206334.1|4348313_4348568_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin

4348313_4348568_-

84 aa aa

4328306-4384135

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP014693_7	Orphan	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	4339161-4339196	2
NZ_CP014693_7	Orphan	7.1\|3544669\|36\|NZ_CP014693\|CRISPRCasFinder	3544669-3544704	36	4339233-4339268	2

1. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to NZ_CP014693 position: 4339161-4339196, mismatch: 2

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtaaggccgtctcgcgagcaagctttgctcccacag	Protospacer
** ******.**************************

2. spacer 7.1|3544669|36|NZ_CP014693|CRISPRCasFinder matches to NZ_CP014693 position: 4339233-4339268, mismatch: 2

gtcaggccgcctcgcgagcaagctttgctcccacag	CRISPR spacer
gtaaggccgtctcgcgagcaagctttgctcccacag	Protospacer
** ******.**************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP014693

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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