CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017270	Geosporobacter ferrireducens strain IRF9 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP017269	Geosporobacter ferrireducens strain IRF9 chromosome, complete genome	5 crisprs	cas3,DEDDh,DinG,WYL,csa3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,cas14k	0	4	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017269_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017269_1

420770-420921

Orphan

Consensus_repeat	Method
GGTGGTATTGGCGATAACACATCATTGTTATTCTTCTTCCTATTGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017269_1

>merge|NZ_CP017269|1|420770-420921|CRISPRCasFinder
GGTGGTATTGGCGATAACACATCATTGTTATTCTTCTTCCTATTGCTAGTGTTGATATTCTGTAATTGTGGATTGTTTGGAGGAATTGGCGGTGTCGGTGGTATCGGTGGTATCGGCGATAACACATCATTGTTATTCTTCTTCCTATTGCT

>NZ_CP017269|1|1|420770-420921|CRISPRCasFinder
GGTGGTATTGGCGATAACACATCATTGTTATTCTTCTTCCTATTGCT	AGTGTTGATATTCTGTAATTGTGGATTGTTTGGAGGAATTGGCGGTGTCGGTGGTATC
GGTGGTATCGGCGATAACACATCATTGTTATTCTTCTTCCTATTGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017269.1\|WP_069974080.1\|425288_426407_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|236413
NZ_CP017269.1\|WP_069974076.1\|422338_423457_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|376614
NZ_CP017269.1\|WP_069974070.1\|416265_416745_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069974071.1\|417091_418348_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069974073.1\|419612_420509_-\|divergent-polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|377404
NZ_CP017269.1\|WP_069974068.1\|413024_414209_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380570
NZ_CP017269.1\|WP_069974081.1\|426432_428280_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP017269.1\|WP_069974079.1\|424993_425194_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069974083.1\|428917_429922_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|234934
NZ_CP017269.1\|WP_069974066.1\|411175_412072_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
NZ_CP017269.1\|WP_083273320.1\|428361_428820_-\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
NZ_CP017269.1\|WP_069974072.1\|418588_419569_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069974078.1\|424174_424897_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_CP017269.1\|WP_069974069.1\|414469_416056_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP017269.1\|WP_069974075.1\|421533_422247_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224495
NZ_CP017269.1\|WP_156782311.1\|423423_424143_-\|tRNA-(adenine(22)-N(1))-methyltransferase-TrmK	unknown	unknown	gnl\|CDD\|378972
NZ_CP017269.1\|WP_069974067.1\|412083_412962_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324
NZ_CP017269.1\|WP_069974084.1\|430260_431292_-\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|179673
NZ_CP017269.1\|WP_069974065.1\|410405_411179_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223488
NZ_CP017269.1\|WP_069974064.1\|409683_410412_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487

Protein	Function_ID	Function_description	E-value
NZ_CP017269.1\|WP_069974080.1\|425288_426407_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP017269.1\|WP_069974066.1\|411175_412072_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	5.60954e-73
NZ_CP017269.1\|WP_069974073.1\|419612_420509_-\|divergent-polysaccharide-deacetylase-family-protein	gnl\|CDD\|377404	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase. This family is divergently related to pfam01522 (personal obs:Yeats C).	9.32863e-83
NZ_CP017269.1\|WP_069974076.1\|422338_423457_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	6.98588e-51
NZ_CP017269.1\|WP_069974068.1\|413024_414209_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380570	cd06347, PBP1_ABC_LivK_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	3.30202e-144
NZ_CP017269.1\|WP_069974081.1\|426432_428280_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP017269.1\|WP_069974083.1\|428917_429922_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|234934	PRK01286, PRK01286, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP017269.1\|WP_083273320.1\|428361_428820_-\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	1.93102e-51
NZ_CP017269.1\|WP_069974078.1\|424174_424897_-\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	7.66203e-18
NZ_CP017269.1\|WP_069974069.1\|414469_416056_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	4.42404e-169
NZ_CP017269.1\|WP_069974075.1\|421533_422247_-\|hypothetical-protein	gnl\|CDD\|224495	COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only].	4.82921e-11
NZ_CP017269.1\|WP_156782311.1\|423423_424143_-\|tRNA-(adenine(22)-N(1))-methyltransferase-TrmK	gnl\|CDD\|378972	pfam12847, Methyltransf_18, Methyltransferase domain. Protein in this family function as methyltransferases.	1.53656e-76
NZ_CP017269.1\|WP_069974067.1\|412083_412962_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	9.60835e-73
NZ_CP017269.1\|WP_069974084.1\|430260_431292_-\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|179673	PRK03910, PRK03910, D-cysteine desulfhydrase; Validated.	5.38538e-98
NZ_CP017269.1\|WP_069974065.1\|410405_411179_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223488	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	8.75599e-125
NZ_CP017269.1\|WP_069974064.1\|409683_410412_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	2.62052e-126

>NZ_CP017269.1|WP_069974073.1|419612_420509_-|divergent-polysaccharide-deacetylase-family-protein
MRIKKLLTGIGGFLLIVFTYLALNHVTLLNVQLGGIIDSVEKAEILEEIKGYGALQGGARLFRVEEDKKYRAKVAFLIDDFGNNGEGTAEMMTIDRPMTFAIMPFMKYSKRDAENAHKKGYEVIVHLPMETRKNSVRGLSAGAIKTSQTDDEIKSFVINAFKDVPYAVGANNHMGVLASSDRRVVNAVVSVLKKKDKYIVDSKTTPKSVISEVARAHEVPVIEMSVFLDNEKAPETIKRQINLLAYSALKRGYAIGIGHVGPLGGSNTAKMIKEMIPELEKRGIKIVFVSELMRDKYK
>NZ_CP017269.1|WP_069974072.1|418588_419569_+|hypothetical-protein
MANTNKSPQVSLALPDRCCTAETGCHFDGSLRNVVSEPIYVQKVYDAALFNLQGLTTVTGQPFTPALGAGARILRILDIRCRKFFNPANINDPRNLVATPTTTVAGAEFVQDGCGRPVTVIGPDGTASENLLFADTEECDELGKGTPIFGTQIIEITGNVIVEIDVVIADHKKCEKTVTLSANVPIAKEGAPLILTNFFELCIPSVFDTAFLPRFTEFCNISCETRLATNSITRDIVIDPNTGAVRANLIIALCVTCEKKIVVPVQLCVLSTGFPVLQADVSPICTTFPQLFPDQIDKKRRPCPPRKWSEDVVTEATEAAEEASIE
>NZ_CP017269.1|WP_069974071.1|417091_418348_-|hypothetical-protein
MSFANQKNALVTDQAGNIHSFRWDNEKIIYACFYKHTKKMEKEILVEACMPEFDVIIDKKDTIYLTCQQKEGKLLLFIYRLGIWEREVLLSSEGINIYNLSVISWKDGLYIFYCVPSFESNKVYRIYYLYRKDEIWRNAELGDIRVKTLLNPLQVLSTSQGLILGYYNLVNGAEQLFIKLYDGTLDLWRDTLQVTDGLNDKLYIDILLVEEEELNIVYSEYIDGNLVVKYEKYKMAGNKLIKKSEYELSNPGNCSYPTLIMFDNMLWTVWTEYDYVASSFSEDNGMTWSVPYQWTESKEGIFVRYKYCLNPRNSDRSYLLNYSYGKDFPDFTFLGFGSFEKAVEMPLITKKKREEEVEEILSIPENQENDLVEVNHEIIEQENLIGIKEKLLELEDRIEQIENFINRRRRGFLFPPRE
>NZ_CP017269.1|WP_069974070.1|416265_416745_+|hypothetical-protein
MLPIYAKNKGRKTFPITEKINTFKLMNFVKALQDITRYKFHCQVYTKNMGNSWSFRYTAQNKILITISFHDDAQEDCSYIYIQDFNFPKSCIEKQMDQKILKLFLQHFQNLDFDMLRFRLLGEETRTLSQHFAFRRTSLDEAYMSLKTVFIPLHTNNVS
>NZ_CP017269.1|WP_069974069.1|414469_416056_-|DEAD/DEAH-box-helicase
MNNITFKQLGLMPEILKAIDALGYEEPTPIQKAAMPAVMDGKDIIGQAQTGTGKTAAFSMPVIQKLSLDVKGPQALILTPTRELAVQVADEISKFSKYLSGVKTLAIYGGQPIERQIKALKAGVQIVVGTPGRMIDHINRKTIKLNNVHTVVLDEADQMLDMGFLEDIERILQETPENRQTLLFSATMPKEIENLARNYQKKPEKIKVVHEVLTVPLIEQYYYEVKPHEKLEVLTRLLDMEKEGLTIIFCRTKKGVDELVESLQSRGYFSEGLHGDLKQSQRDRVMKKFREGTVDLLVATDVAARGLDVNNVHIVINYDIPEDLEYYVHRIGRTGRAGKAGVTYTFVTGRQIGLLKSIERFTKSKIRRKPIPSVNDLAERQREVFKKRIVSTIEAGHLTPYISLTETLAEEYSSIEVAAALAKIIMEKERTGLVDRSEDLFDDTGATESDKARIFINIGKRDRIRAADILGAVANEGGISGREVGTIDLFDKYAFVEVPKNQAAKLVKKLNKIRIKGKKINAEPANQR
>NZ_CP017269.1|WP_069974068.1|413024_414209_-|ABC-transporter-substrate-binding-protein
MKKKTSYLVLTAFLIFALVLGGCAPKTQDTPAAGGEAAQEIVKVGWIGSLSGDQAVWGQCELNTVKMMFEEINEKGGLLGKKVEVVGYDTRGDATEAVNAVKRLTAQDKVVAIIGPNASGQAIAVSSVLEEMKVADIATVATNPKVTVVDDKVKPFNFRVCFIDPYQGAVAAGYATEVLGFKKAAILYDVADDYSQGLTEFFEKYFVEKGGQIVAKEAFKFGDVDFRPQLSKIKEAKPEVIFMPYFFKEVALSANQARELGIDAVLMGGDGWPSDVLLEMAKDAVEGSYFVNHLDFEDPDVQDFKAAYRTKYNSPVELNGYLAYDAVKLLEAAVNNANSLDSVAIRDALETASVKGITGQITISKDTHNPEGKDAAIIKIVDGEYVFQQKYSAK
>NZ_CP017269.1|WP_069974067.1|412083_412962_-|branched-chain-amino-acid-ABC-transporter-permease
MSAFMQQIINGLSIGSVYALMAVGYSLVYSIMNFSNFAHGGVIMLGSYFGFFLLTLYELPFVPAFALAAIGAGALALVIERIAYRPLRKRSAPFLYFIISAMGASIFLENIVIATIGPTFKTYPRILSPQPFTFGSLSIGRLDMMMFIISGISLTLLVYIIEKTKIGMAIRATAYNMRASALMGVNTDKIIFIVFGLGGFLGGIAGVLFGMKYTVYPQIGFITIKSFIAAVFGGLGSLQGAVIGSVLLGIIETLTSGYLSSQYRDLIAFALLIFILIVRPMGLMGKMTEDKA
>NZ_CP017269.1|WP_069974066.1|411175_412072_-|branched-chain-amino-acid-ABC-transporter-permease
MDWFYVQGILILSGIYLLAVLGLSLLTGFTGLFSFGHAGFMAIGAYVTAMMTVNFKIPFVFALLIGGSAAALLSLLIGRLTLNLKGDYFCIATLGLGEAIRLILDNVQYFGGARGWPGIPLKTSLVNVIVINIIAIIVMANLIRSRHGRNFIAIREEEMASQIIGINVFRYKMISLAISAMYAGIAGGMLAHYLGFLQPKMFQMAKSTELTIMVIFGGLGSISGSALGAIVLTALPELLRSFAKWRLVVYGLAVIFIMITRPQGLMGGYELTFRNIKRFFSQIGLKSKEKTSAGGDQS
>NZ_CP017269.1|WP_069974065.1|410405_411179_-|ABC-transporter-ATP-binding-protein
MNILEMKNVTKQFGGLTAVGNVSIQVEKGSIFGLIGPNGAGKTTIFNLITGIYKVSEGEIIFQDQRIDQFQPYQIADMGITRTFQNIRLFKKLTAYENILTACHYNANYNILDAVIRTHRFKKEEKMLHDHAEELMEIMELKDRKDIVSSNLPYGLQRRLEIARALALNPKLLLLDEPAAGMNPDETIKLMELIRQIREQFKLTVVVIEHHMDLIMGVCDKIAVLNFGRKLAEGTAQEIQENPKVIEAYLGEEEVNC
>NZ_CP017269.1|WP_069974064.1|409683_410412_-|ABC-transporter-ATP-binding-protein
MLKVENLNVYYGGIHALRGIDIEVQKGQIVSIIGANGAGKSTLLNAISGVIRPKEGSIKYRGKDLPAMPYKIVEAGISQVPEGRLIFANLTVKDNLIIGAYLRKDKEGIAQDLKNVYQLFPRLEERMNQMAGTLSGGEQQMLAMGRGLMSNPDLILLDEPSLGLAPLLVKTIFEIIEDIKKMNKTILLVEQNAYKALSIADKAYVLEQGKIIKEGNAKELTKDPSIQEAYLGKSHGTGEASK
>NZ_CP017269.1|WP_069974075.1|421533_422247_-|hypothetical-protein
MKQLDLLWELQEMEQLLSEKKKLLKNLQQPKEIEEKIQEHKKMKNGYETIRKQLEDTQKDIKKIEHDLKELDFKKEEVKGKLYSGKINDLKQLGILMKEQEKAEGQYTQVEANLVEKIEETESLEEKVREEEKMERKMGSKIKHMLKERKIDIEKLQVEIEALTKKIEIHLNNIEKAYIDVYEDVKRRKNNPIALVEYDICTGCHMDLPVMTMSDLKNHKLVTCNNCSRILYVQLKG
>NZ_CP017269.1|WP_069974076.1|422338_423457_-|Nif3-like-dinuclear-metal-center-hexameric-protein
MAESGRKIIEIIEKQAPLYLAESWDNVGLQLGNPDKLVKKIMVCLEVTEAVLQEADAKRIDMIVAHHPLIFKPMKKFTTDDPLGRMIYFLIQKDILLYCAHTNLDMAYGGLNDLLAFNIGLSEIKSLTNTYQRKYFKIVVFVPESHEEEVRSALCSAGAGFIGNYSDCSFKVKGEGTFRPLRGANPYIGSIGEVERLKESRVETIIAEDCLQTALKKMLHAHPYEEVAYDLYPLGNVYEKNGLGRMGYLKNPEKLLELCNRLKRLLGIETIKIMGDQSKIVKKVGLCTGSGAEFIYNAYQEGCDCFITGDVKYHEAQYAQQLDIPVIDAGHFDTENYACGLYAKSLEKQLADNHCHVDICFSSTNINPFCYI
>NZ_CP017269.1|WP_156782311.1|423423_424143_-|tRNA-(adenine(22)-N(1))-methyltransferase-TrmK
MNMKLKPRLLAIAQMVKNNSVVADIGTDHGYIPVYLINHEIARKVIAADINRGPLNSANSTIKAHGLENYIETRLGSGLEVLLPGEVDTVIIAGMGGLLIRDLLNARPDIVQTVTTFILQPMVAQDELRKWLIHNSFQIVEEKLVKEDHRIYEIMVVQKGHQEIPDDLYYDIGIKLIENKDPLLREFLLKHIQKNKVIIEGLKDQSSEEGCAKRLSCREKLEKLEEVLQWLNQEEKLLK
>NZ_CP017269.1|WP_069974078.1|424174_424897_-|HAD-family-hydrolase
MINTILFDLDGTLLPMDVDVFMSNYFKALGKKCAHLVDPKKLPKMILDSTECMVRSVDAVKTNQEVFMEDFAKKIESDFQSLLPVLDEFYKEEFQNLKFTTQPVEIVVEVIKILKEKGYTLVVATNPLFPRQAILHRIQWSGLEENDFSLITDYESMHFCKPNLDFYSEILQKIEKRSEECIMVGNDVQEDIIAEKLGMKTFLIEDNIINRENKEPSPEYRGSYQDLLDFVMALPNLKKE
>NZ_CP017269.1|WP_069974079.1|424993_425194_+|hypothetical-protein
MNEKKTQSHSMTPNPSLVHFKWGGTTTEWEEEADQLMNCLQDQLDSKENDIVKEKKIEYAKQKQYW
>NZ_CP017269.1|WP_069974080.1|425288_426407_-|RNA-polymerase-sigma-factor-RpoD
MSKKVEEQKVESVKTLIDKGKKRGILTYNEIMNTLEEIELDKEQVEEVYDNLASMGIDIVGERDDEDLDDIPEAEEIDDIPETEEIVDLDISIPKGINIDDPVRMYLKEIGKVPLLSAEEEIELAKKMEQGDDEAKKRLCEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDWRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRISRQLLQELGREPRPEEIAKEMDLPVEKVREILKIAQEPVSLETPIGEEEDSHLGDFIPDDDAPAPAEAAAFSMLKEQLIEVLDTLTPREQKVLRLRFGLDDGRARTLEEVGKKFDVTRERIRQIEAKALRKLRHPSRSKKLKDYLE
>NZ_CP017269.1|WP_069974081.1|426432_428280_-|DNA-primase
MGINLHEGLIEEIRNRSDIVEAVSKYVNLKKAGSNYKGLCPFHHEKTPSFIVSEEKQLYHCFGCGEGGDIINFIMKMENLDFIDAVTTLGEKAGIRIEEASSKEEKKEFENRNRIYEMNREAALFFYSNLIKKENKGLEYLKERKVDLSTIKKFGLGYAENQWEALNNYLLKKGYTQEMILSAGLVLKRNQKDGCYDRFRNRIIFPIINTTGKVIGFGGRALGDEQPKYLNSPETSVFNKGRNLYGLNTAKKVLGKEKRMIVVEGYMDVISLSQRGISNVVASLGTALTKEQAALLKRYTDEVYIAYDGDSAGQAAALRGLEVLGEAGCDVKVVIFTQGKDPDEIITKKGKKVFLDELEGALSLIDYKITLVKKENDLTTIEGRIKFVKAIAEIIKQLKSPVEVDAYIKKISIEAQISEDAIKTEIYGNNRYNQPVKMHKPIVSGEKHRSKFERHTNKYNIESIQPTEKLGYLEAERGILKLMLMNKQYFNNVVSTFPELNFTDPVHKKIAKLVARAYEDMDVIDMDSLMNQLDINEITILHNIKKVIIPEDNTQKALIDFMNQIQKFDLMKRKKDIETELKEMEKKENKSQMEIARIRELCIQLEKILKELKHL
>NZ_CP017269.1|WP_083273320.1|428361_428820_-|YaiI/YqxD-family-protein
MMIIYVDGDACPVKGEIVEVSKKYDLQVIMVLSICHLTKSDGFSEYVVVDHRDQSVDMEIINRVKKGDVVITDDYGLASIVLMKEALCMSSRGMQYTAENIDLLLYKRHMNQKIMRAGGKVKGPAKRSNSEDRQFLINYEKMLKQSLYNSLL
>NZ_CP017269.1|WP_069974083.1|428917_429922_-|deoxyguanosinetriphosphate-triphosphohydrolase
MLFREITEKYEEERFSPYAARSQHTKGRRLTEALCEVRTEFQRDRDRILHAKAFRRLKHKTQVFLSPEGDHYRTRLTHTLEVAQISRTIARALQLNEDLTEAIALGHDLGHTPFGHSGERILNEVHPMGFHHNEQSLRVVDHLEKGKRGYGLNLTFEVRDGILHHTGADRPATLEGQIVKISDRIAYINHDIDDAIRAGVLKYEDLPKDCLENLGATHSDRIHTMIMDLIHHSIHQPKLSQSREKLFYIDKLRAFMFENVYLNKKAKREEEKAQHIIQELYHYFLKNCDRLPEEMGQRIEEFGIQETVKDYIAGMTDRYAIQKYMDIFVPTVWK
>NZ_CP017269.1|WP_069974084.1|430260_431292_-|pyridoxal-phosphate-dependent-enzyme
MLVKREKISFLDPQPTPINYLPTLSKELGVELFIKRDDLTLFGAGGNKLRKLEYILYDAIQKGATTLLTVGGAQTNHGRLTAAVAAKYGMKCAIVCVDEYPGEISANILLDGILNAEVVMKKNDGRDKDEQLAETVATVKARYEDMGETVYEIPLGGSDVVGMMGYYECAVEITAQAQKLGIEDATVVTGVGSMGTYLGLYCGLKNEGSPLGITGIAILPFNDYHDRRIVEYFENAKEEYNLSIDACRKDFNIETGYTRGAYNNSDSTVRQAIYRMARSEAILLDPCYTGKVFAGVLDMIEEGKIKKGEKIILLHTGGMPGFYTKHHRVEFEKELMGHVTIVE

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Crispr_ID: NZ_CP017269_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017269_2

1535569-1535664

Orphan

Consensus_repeat	Method
AATTTATTAAATTTTTTGACCTTCAG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP017269_2

>merge|NZ_CP017269|2|1535569-1535664|CRISPRCasFinder
AATTTATTAAATTTTTTGACCTTCAGACGCAATAGGGTGCCTATGGGAAGGAGGTAGAGGAGGTATTTCTAATTTATTAAATTTTTTGACGTTCAG

>NZ_CP017269|2|2|1535569-1535664|CRISPRCasFinder
AATTTATTAAATTTTTTGACCTTCAG	ACGCAATAGGGTGCCTATGGGAAGGAGGTAGAGGAGGTATTTCT
AATTTATTAAATTTTTTGACGTTCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017269.1\|WP_069975127.1\|1535114_1535501_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP017269.1\|WP_069975148.1\|1546127_1548194_-\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_CP017269.1\|WP_069975142.1\|1545140_1545512_-\|NAD-binding-protein	unknown	unknown	gnl\|CDD\|223643
NZ_CP017269.1\|WP_083273433.1\|1534841_1535006_-\|transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP017269.1\|WP_069975123.1\|1532243_1533638_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP017269.1\|WP_069975145.1\|1545539_1546115_-\|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl\|CDD\|376890
NZ_CP017269.1\|WP_069975133.1\|1539384_1539948_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017269.1\|WP_069975104.1\|1527054_1528602_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173855
NZ_CP017269.1\|WP_069975119.1\|1530482_1531247_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP017269.1\|WP_069975125.1\|1533720_1534641_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069975117.1\|1529478_1530420_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP017269.1\|WP_069975135.1\|1540028_1540913_+\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|379081
NZ_CP017269.1\|WP_069975139.1\|1541633_1542335_-\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_CP017269.1\|WP_156782513.1\|1528588_1529446_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224094
NZ_CP017269.1\|WP_069981342.1\|1526237_1527023_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP017269.1\|WP_069975121.1\|1531593_1532247_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP017269.1\|WP_069975131.1\|1538090_1539056_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP017269.1\|WP_069975140.1\|1542363_1545093_-\|sensor-histidine-kinase-KdpD	unknown	unknown	gnl\|CDD\|225115
NZ_CP017269.1\|WP_069975137.1\|1540956_1541532_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP017269.1\|WP_069975128.1\|1537599_1537818_-\|cation-transporter	unknown	unknown	gnl\|CDD\|236827

Protein	Function_ID	Function_description	E-value
NZ_CP017269.1\|WP_069975127.1\|1535114_1535501_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.63701e-15
NZ_CP017269.1\|WP_069975148.1\|1546127_1548194_-\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP017269.1\|WP_069975142.1\|1545140_1545512_-\|NAD-binding-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	5.73428e-06
NZ_CP017269.1\|WP_083273433.1\|1534841_1535006_-\|transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	4.64793e-07
NZ_CP017269.1\|WP_069975123.1\|1532243_1533638_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.17532e-53
NZ_CP017269.1\|WP_069975145.1\|1545539_1546115_-\|potassium-transporting-ATPase-subunit-KdpC	gnl\|CDD\|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	4.24464e-96
NZ_CP017269.1\|WP_069975133.1\|1539384_1539948_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	5.63699e-14
NZ_CP017269.1\|WP_069975104.1\|1527054_1528602_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173855	cd08490, PBP2_NikA_DppA_OppA_like_3, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	3.77306e-167
NZ_CP017269.1\|WP_069975119.1\|1530482_1531247_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.0754e-27
NZ_CP017269.1\|WP_069975140.1\|1542363_1545093_-\|sensor-histidine-kinase-KdpD	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	0
NZ_CP017269.1\|WP_069975117.1\|1529478_1530420_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.375e-106
NZ_CP017269.1\|WP_069975135.1\|1540028_1540913_+\|4Fe-4S-binding-protein	gnl\|CDD\|379081	pfam13237, Fer4_10, 4Fe-4S dicluster domain. This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	1.59065e-09
NZ_CP017269.1\|WP_069975139.1\|1541633_1542335_-\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.49222e-77
NZ_CP017269.1\|WP_156782513.1\|1528588_1529446_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	6.35813e-95
NZ_CP017269.1\|WP_069981342.1\|1526237_1527023_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.63238e-116
NZ_CP017269.1\|WP_069975121.1\|1531593_1532247_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.22249e-81
NZ_CP017269.1\|WP_069975128.1\|1537599_1537818_-\|cation-transporter	gnl\|CDD\|236827	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional.	2.13842e-08
NZ_CP017269.1\|WP_069975137.1\|1540956_1541532_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.39824e-18
NZ_CP017269.1\|WP_069975131.1\|1538090_1539056_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	7.92494e-26

>NZ_CP017269.1|WP_069975127.1|1535114_1535501_+|winged-helix-turn-helix-transcriptional-regulator
MRKQVLPHNHGKDIENILKKMPDTECFLDASAVFQQLCDGSRLRILWLLCHCEECGINIAAAVGMSNAAVSHHLKSLKLNGLVTSRRAGKEVYYTLANTETAQLIHRIIDDFFQMTCPSKGIAEYIQE
>NZ_CP017269.1|WP_083273433.1|1534841_1535006_-|transposase
MAPCIQNNPLGFQAIERIFADFKEKYGMSYTQYRGIQKVHDEAMLDFTCVNMKK
>NZ_CP017269.1|WP_069975125.1|1533720_1534641_+|hypothetical-protein
MKKPNSKERHFKKSVLAAAMIIGANIIAFQGFTQAASAAVYNKTNIIPTSYANSTSVSSQTVQNSLPEGYKKANYKVGTINLPYYKNQTPAEKDMTKEAAAELVAQYLWQVYGANLEGQTIEMGYDAPTENTPRPMWIAEVELKGQNYADGYRVDRYGVWIDSVTGELYNIGLNRTLKEKVPVGPDWSLNESEYEAAAKKLAEKYNIVNSTVQSIQFTGQGASFSTNISSTYGDPTISFQVHGENGEVALMTISRYDKVLLGVMYNGQYKYDLLKIEELVQEMEAKAKADEATSADKSKVPTLMGN
>NZ_CP017269.1|WP_069975123.1|1532243_1533638_+|HAMP-domain-containing-histidine-kinase
MKHRTFLTTLALFLFFFNLGIFIISVAIFKDTVHRAEERSLGEHYFIASALIKDFHVVESRGINIEGSLSSLLQPYSYLSGDKKAGLALYKDNQLVYSNHDTFVLQRNSLEPPKNGNRVATVRKADKKTYVIVSGNLPIPYDFYTLIYTYDTTDAIRSWSYLKNMLFLAGFVLSVLLAFGLLIILNRIFKPLKQISQTSKNIANGAYETRLPIYGHDELSEMAQSFNHMAEEIQHQMAELIDTADKKQQFIDNFAHELRTPLTAIYGYAEYMQKAVLSEDDRLSALTYIMSESRRLQTIAFQLLELANLQNNQITCEEQKISRLFEMVKQTLHGKLAEKNIYIEFNSEIETIWGDACLLESLLINLIDNAIKACGKGGHIFVCAVHEAGKKTILIRDNGKGMTPEVLSQIMEPFYRGEKSRSRSDGGAGLGLAICKQIALHHGAELSFTSFPGKGTTAKITFTT
>NZ_CP017269.1|WP_069975121.1|1531593_1532247_+|response-regulator-transcription-factor
MASILIVEDEVAINELIKRNLQLVGHHCTPVFDGKTAISEIQCQSYDLMILDIMLPGLDGFEVIKHANETPTIFLTAKNSLPDRIKGFSMGADDYLTKPFEMLELLARVEAVLRRTQKSRNDFEVGDVKIDFDGHQVYHKGQLVECTPKEYELLEVLVNNRNIALSRERLLELVWGYDFDGDTRTIDVHIQKLRKKLGWEDVIKTVYKLGYRLEVSQ
>NZ_CP017269.1|WP_069975119.1|1530482_1531247_-|class-I-SAM-dependent-methyltransferase
MKALLESVEEYWRQRADGYCQVNLEELDSFKRRAWTDLINEYAPRISGKRLRVLDIGTGPGFFAIIMAACGYEVTAIDYTETMLQKAKNNAGIYRNAIHFERMDAHNLKFEENTFDLIVTRNLTWNLERPDMAYREWHRVLAQGGRLLNFDANWYLHVHDAEKRKAYEQDRVNCAERGFADHYIHTDTEAMEEIARKLPLSKEHRPEWDVKELRKIGFGKIMIVKEIGSSVWDEEEIVNYGSTPMFMVCAEKSK
>NZ_CP017269.1|WP_069975117.1|1529478_1530420_-|ABC-transporter-permease
MKKYIGRRLLQLIPIILGITFLSFALMQTAAGDAVDALYDNTSGGVSEQIKVEKRAELGLDKPFLVQYFNWLMDAVRGDMGVSYISKKQVFETFISKLPATIYLTLAAILVTVLVSIPLGILAAVKRNQFIDYFIRMMSFIGNSMPSFFISLLLIYVFALKLNILPVIGNSEGWKSIILPTLTLAIAMSSKYTRQVRAAVLEELNKDYVMGARARGIRESVIFYASVLKTAMLTIITLLALSIGSLLGGTAIIESIFMWDGVGKLAVDSITMRDYPMIQAYVIWMALIYVAVNLTTDILYHYLDPRIRILQEE
>NZ_CP017269.1|WP_156782513.1|1528588_1529446_-|ABC-transporter-permease-subunit
MRSGHHQDYTLIKFYVLLTLVGGLLLIAAFAHRLVPFDPYAQDLSKALQPPSSAHWLGTDRYGRDMLSRVMMGAQSTIFTSLLLVGIISIIGTWIGVVCGYIGGKIDTFIMRVSDVFLAFPGMVFAIAVAGVLGGGIMNAVIALACISWPKYARLARGQVLSVKTMPYIAAAKMSGSGTLKVIFKHIIPNIIGTILVTATLDIGTMIMELAGLSFLGLGAMPPTAEWGSMMSNGRSMLQTSPWVILAPGCAIFISVMLFNLFGDTVRDLLDPRIIQRRGKGNETI
>NZ_CP017269.1|WP_069975104.1|1527054_1528602_-|ABC-transporter-substrate-binding-protein
MKQYRKIGGMLLAVALVVSSMTGCTNTKADTTEKVFNYGTMAYGVAMGNAGLNPHEGYSGWSTVRYGVGETLFKFNASMELEPWLAKDYQQVNEYTVKINLRDDVFFSNGNKMTGEAVKVCLENLVTVHDRAPKDLQIKSIAAEGQSVTIVSENKVPGLVNYLADPYGAIIDMEAGVSEDKNVVGTGPYVAVKVSDTEIHLEANNKYWNGVPKVDKVNIKSISDGDTLTMALQSGEIDAAQGLPYASLKLFQNDDRYTISSTETSRVYQAALNYHSKMIQDSAVRKAMAMCTDKEGFTAVLLQGNGSPAVGPFPDNFKFGGNAVKEVPYDIEGAKEVLESAGWVDTDGDGIREKNGQKLSIDWLTYTSRQELPLLAESVQASYKKAGIEVKVNATDSYKDFLKAGKYDVFANAFVAAPTGDPQYYFTTHLVDGSDYNRGYYHNDKVEKWVEELRNEFDLNKRSNLAVKIVQQVLDDNAYIYASHLKMSFVMKKGITGFTAHPSDYYEITADLDKN
>NZ_CP017269.1|WP_069981342.1|1526237_1527023_-|ABC-transporter-ATP-binding-protein
MQQSLLEMRHVEISYGGEPVVHDVNLVLKPGEILGVVGESGSGKSTLIKAAMGLLGNQGRITGGDILYKGNSLLHMKPEALRKMRGPEIAMVFQNCASSLCPIRRIGDQLFELMEQHNQRNREKVIDRALDLFEKMNLSDGRNILESYPFELSGGMNQRVGIVMAMMLKPALLFADEPTSALDVIVQAQVVKELMKLRDEFGTAIVIVTHNIGLVSYMADKAAVMYQGRLLEYGATKEIISNPQEAYTQRLIQAVPKIRRG
>NZ_CP017269.1|WP_069975128.1|1537599_1537818_-|cation-transporter
MKKTIKLQNLDCGNCAAKIENAIVKLEGVIGVKVNFMGQKMILEAPDDRFNEILEEAKKIAKKIEPDIEVMA
>NZ_CP017269.1|WP_069975131.1|1538090_1539056_+|helix-turn-helix-transcriptional-regulator
MFSAILSHFSDRIIAGQGKDHISYNLKTLDGKGTASVYSVFPGIEIGNLVFQTSHLNPIKHAQMNIVEINHCKEGRAECKMSDGCFQYIGEGDLFMNTLNNYSDSIELPLGYYHGIMVLIDIDIAAPVILELFPNIPINMQELSERFFDHDKCFLIQEKPEIQHIFSGMYTIPASARLLYYRLKIQELLLYLYFFLPSKEKPKKTYPQQQVEIIKQIQKKITGEPEHRFTIEDLAREYCISPTALKSNFKGVYGVPIATYMKKYRIQQAAILLRQTQLSVAEIAAKIGYESQSKFGAAFKEIMKITPLEYRRKFAYTTNNF
>NZ_CP017269.1|WP_069975133.1|1539384_1539948_+|TetR/AcrR-family-transcriptional-regulator
MQILKDEIRNKILDVAENLFYQNGFRDTTTRSIAKAVGISVSNLYLYYENKEAIFYGVTDGFFEYFINGFKTFVNHDDKSNGMNIDISHVFQRIIKVDQKKFIIIADKSQGTKYEGFKEQIINILSNHMLSQVNKEFVEDELIIYILAKNFMEGIIEIAKNYKDDRWLEKSIGTLVSYHINGMKHLM
>NZ_CP017269.1|WP_069975135.1|1540028_1540913_+|4Fe-4S-binding-protein
MKAVIVVFSPSGNTERVGKLLKTSLEQNSIGAELINIAGKEKYFLTKYTQSFLQEIVNEHDILFIGSPVYAHHLQYHVKDLIESLPRPMDGWGKIAVPFVTYGGIHSGIALDEAGKLLRKSGRKVLAGLKVSSSHHMTRAFMKEEYNKNPDEDKLISIIEDLVQLVKSVDLNSTKDYSNHLRYQSVKTYLKAKVIFKEKVWHEKRYPKVLIDYNKCIQCGKCVSVCPVCHLEQDLDSLIVKNINTQCIHCFNCIFECPQKAISPMGDLEKAKIFMENMIKKAKEHPDTCLYPTT
>NZ_CP017269.1|WP_069975137.1|1540956_1541532_+|class-I-SAM-dependent-methyltransferase
MGIKKFLLDGQSENGNLIYKKMLMWLNNPKRVKYNNPDRLVQASGIQSGQTVLEIGCGSGFFTVSASKILGDEGKLYSIDIHPLAVEETQKKVDQLELKNVIVKKEDAMKSSFGDSMFDLVLLYGVVPAPVIPMKDISREIYRVLKPGGIYAIWTLSPFWSPCTALKCASFEKMKKLNGVFRLRKVNYPNQ
>NZ_CP017269.1|WP_069975139.1|1541633_1542335_-|response-regulator
MDNKPLILVIEDDKAIRNFISAALRTQGYKYIETENGEKGLTLIMSHNPDIIILDLGLPDMDGLRIIEKVRLWSNTPIIVVSARGQEREKVEALDLGADDYITKPFGISELLARLRVSLRHIYRHGSEQKACMSEFVLGDLKIDFEKRIVSLRNEEIHLTPIEYKILTLLSRHAGKVLTHNFILKEVWGSTIGNEAQSLRVFMASLRRKIEKEPAQPRYILTEVGVGYRMVDE
>NZ_CP017269.1|WP_069975140.1|1542363_1545093_-|sensor-histidine-kinase-KdpD
MNSNGIKNINLETRPDPEQLLAKIKSENNLKAKGMLKIFFGYAAGVGKTYAMLDAAHAVKKSGVDVVVGYIEPHTRPETLALLDGLEVLETKSVFYRGIYIKEFDLETAGKRKPEIILVDELAHTNAPGSKYKKRWQDIYELLDAGIDVYTTVNVQHIESLNDIVASITNVFVKETIPDKVFDEAGQVELIDIEPEDLLKRFNEGKVYRKEQAKRAQSNFFQKENLVALREIALRRTADRVNREVQIARLSKTNIKILPVKEQLLVCISPAPTSAKVIRTAARMADSLQATWIAVYVQTSENKYIDKTVQEQLQKNMTLAEQLGAEVVTLHGDNIADQLVSYAKLRNATKIVIGRNQKSRNPLLRILKKDIVNRLLDLTAYIDVHVIPGISQDYDNRTKPKHKNADLFLKFTFSKIDFLKIIGVLIFATALAYSFYAIGFAEANIIMAYIVGVLVMTLITKGYLMGMIGSVLSVLAFNYFFTEPRFTFSVYDAGYLVTFPIMLSVALITSTLTSRIQHQMVTSLKREEHTQMLYDVTRSFLNVSNRESIVVKGIEYLTSVLKRDIIVYLGDENDNLAEPILNAQGKMTQDLLDKNEEAVVNWVFKNRKNAGVGTDTLPGSVAYYVPIKTHQKIMGVIGIKCYDDILDIDQRHFLDSVTVQMAIALEREKLTEEQAKIKIEVEREKLRSDLLRALSHDLRSPLAGIAGATTTILENREILDPETVNELLNGIYEDSEWLTRLVENLLSMTRIDEGKLQLRKKPESIEEVISEAIQHIKKRAKDHVIKVQIPEDIFIVPMDGKLIEQVLINLIDNAIKYTPKGTTIEIRAFEAGESAYMEVSDNGEGVPEDSIKHIFNRFYTSESSSRDSRRGIGLGLAICKSIVEAHGGKIEAHNKKEGGARFRFSLPLD
>NZ_CP017269.1|WP_069975142.1|1545140_1545512_-|NAD-binding-protein
MNYVIIGGDSKACRDFINILAGSIDHLTIICPEIQYAQSLPAEFKGNLVIGNLRKESTLEKANLSSADTVLIWTKNEDINALLAAAVKKIYNVKNVVVYTCESKNSKFYEDLEIDTVAISKFL
>NZ_CP017269.1|WP_069975145.1|1545539_1546115_-|potassium-transporting-ATPase-subunit-KdpC
MKNNVVQQSFKFVLVMTIITGFIYPLACTAIAQIIFPDKANGSILYQNNKPVASELIGQEFTSEKYFWSRLSATSPYPYNGGDSSGSNKTPAGEEIADAVQQRIKLIRALDPENDQKIPVDFITASGSGLDPHISPAAALYQAGRISKVRNIEKAVLMNLIEKNTEKRQLGILGEPRVNVVKLNIDLDNLE
>NZ_CP017269.1|WP_069975148.1|1546127_1548194_-|potassium-transporting-ATPase-subunit-KdpB
MKKEENKFVTKDIFINAIKDSICKLSLKTQIKNPVMFVVYIGAILTTGLFFGALFGYADAHAGFIFGISMLLWFTVIFANFAEAIAEGRGKAQAESLRKAKKDVSAKKLENPDRNASFEMVKSSQLKKGDIVFVKAGEQIPADGEVIEGAASVDESAITGESAPVIRESGGDRSAVTGGTTVLSDWLMIRVTAEAGESFLDKMIAMVEGATRQKTPNEIALQILLTTLTIIFLVVTATLYPYSVFGVEQSGRGEVTSITALIALLVCLAPTTIGALLSAIGIAGMSRLNQANVLATSGRAIEAAGDVDTLLLDKTGTITLGNRRASEFKPVQGVSEKELADAAQLSSLADETPEGRSIVVLAKENYGLRGRNLNELKAKFIPFSAKTRMSGVDIGADEIRKGAADAVKSYVESKGGNFPKSCQEIVESISKAGGTPLVVAKNNKVLGVIYLKDIIKSGVKEKFEDLRKMGIKTIMITGDNPLTAAAIAAEAGVDDFLAEATPEAKLELIREYQQKGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDIVRIGKQLLMTRGALTTFSIANDIAKYFAIIPPLFVGMYPVLGKLNIMGLSSPESAVFSAVIYNAFIIIGLIPLALKGVKYQELPADKLLRKNLLVYGVGGIIAPFAAIKLIDLFITAIGIV

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Crispr_ID: NZ_CP017269_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017269_3

3213821-3213906

Orphan

Consensus_repeat	Method
TGGAAGAACAGCAGCAACAGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017269_3

>merge|NZ_CP017269|3|3213821-3213906|CRISPRCasFinder
TGGAAGAACAGCAGCAACAGCTGCAGCAGCAAAGTGAAGAATTGCAGCAGACCAATTCTCAACTGGAAGAACAGCAGCAACAGCTG

>NZ_CP017269|3|3|3213821-3213906|CRISPRCasFinder
TGGAAGAACAGCAGCAACAGCTG	CAGCAGCAAAGTGAAGAATTGCAGCAGACCAATTCTCAAC
TGGAAGAACAGCAGCAACAGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017269.1\|WP_069977913.1\|3217364_3218723_-\|PFL-family-protein	unknown	unknown	gnl\|CDD\|180009
NZ_CP017269.1\|WP_069977926.1\|3223116_3224079_+\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	unknown	unknown	gnl\|CDD\|237373
NZ_CP017269.1\|WP_069981455.1\|3224093_3226283_+\|DNA-topoisomerase-III	unknown	unknown	gnl\|CDD\|236078
NZ_CP017269.1\|WP_069977919.1\|3219354_3220944_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|237894
NZ_CP017269.1\|WP_069977894.1\|3205059_3205323_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP017269.1\|WP_069977931.1\|3228169_3229246_-\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238525
NZ_CP017269.1\|WP_069977896.1\|3205466_3207650_-\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|185053
NZ_CP017269.1\|WP_069977888.1\|3196656_3197973_+\|B12-binding-domain-containing-radical-SAM-protein	unknown	unknown	gnl\|CDD\|223963
NZ_CP017269.1\|WP_083273582.1\|3199377_3200628_-\|threonine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236182
NZ_CP017269.1\|WP_069977928.1\|3226455_3227700_+\|S-methyl-5-thioribose-kinase	unknown	unknown	gnl\|CDD\|236561
NZ_CP017269.1\|WP_069977904.1\|3211081_3212371_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_CP017269.1\|WP_069981454.1\|3201237_3202950_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP017269.1\|WP_069977914.1\|3218738_3219008_-\|ACT-domain-containing-protein	unknown	unknown	gnl\|CDD\|178923
NZ_CP017269.1\|WP_069977924.1\|3221171_3223025_+\|DNA-mismatch-repair-protein	unknown	unknown	gnl\|CDD\|213250
NZ_CP017269.1\|WP_069977911.1\|3215964_3217119_+\|protein-glutamate-O-methyltransferase-CheR	unknown	unknown	gnl\|CDD\|224271
NZ_CP017269.1\|WP_156782410.1\|3227925_3228084_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069977898.1\|3207790_3209155_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069977892.1\|3203092_3205018_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP017269.1\|WP_069977900.1\|3209269_3210589_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|250388
NZ_CP017269.1\|WP_069977890.1\|3197986_3199348_+\|cobalamin-B12-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|275160

Protein	Function_ID	Function_description	E-value
NZ_CP017269.1\|WP_069977913.1\|3217364_3218723_-\|PFL-family-protein	gnl\|CDD\|180009	PRK05313, PRK05313, hypothetical protein; Provisional.	0
NZ_CP017269.1\|WP_069977926.1\|3223116_3224079_+\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	gnl\|CDD\|237373	PRK13387, PRK13387, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional.	2.19832e-84
NZ_CP017269.1\|WP_069981455.1\|3224093_3226283_+\|DNA-topoisomerase-III	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP017269.1\|WP_069977919.1\|3219354_3220944_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP017269.1\|WP_069977894.1\|3205059_3205323_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	3.49959e-10
NZ_CP017269.1\|WP_069977931.1\|3228169_3229246_-\|aminopeptidase-P-family-protein	gnl\|CDD\|238525	cd01092, APP-like, Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.	4.07725e-101
NZ_CP017269.1\|WP_069977896.1\|3205466_3207650_-\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	0
NZ_CP017269.1\|WP_069977888.1\|3196656_3197973_+\|B12-binding-domain-containing-radical-SAM-protein	gnl\|CDD\|223963	COG1032, COG1032, Fe-S oxidoreductase [Energy production and conversion].	1.99181e-27
NZ_CP017269.1\|WP_069977911.1\|3215964_3217119_+\|protein-glutamate-O-methyltransferase-CheR	gnl\|CDD\|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	1.76517e-59
NZ_CP017269.1\|WP_069977904.1\|3211081_3212371_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.55876e-50
NZ_CP017269.1\|WP_069981454.1\|3201237_3202950_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.71232e-47
NZ_CP017269.1\|WP_069977914.1\|3218738_3219008_-\|ACT-domain-containing-protein	gnl\|CDD\|178923	PRK00194, PRK00194, ACT domain-containing protein.	2.47674e-39
NZ_CP017269.1\|WP_069977924.1\|3221171_3223025_+\|DNA-mismatch-repair-protein	gnl\|CDD\|213250	cd03283, ABC_MutS-like, ATP-binding cassette domain of MutS-like homolog. The MutS protein initiates DNA mismatch repair by recognizing mispaired and unpaired bases embedded in duplex DNA and activating endo- and exonucleases to remove the mismatch. Members of the MutS family possess C-terminal domain with a conserved ATPase activity that belongs to the ATP binding cassette (ABC) superfamily. MutS homologs (MSH) have been identified in most prokaryotic and all eukaryotic organisms examined. Prokaryotes have two homologs (MutS1 and MutS2), whereas seven MSH proteins (MSH1 to MSH7) have been identified in eukaryotes. The homodimer MutS1 and heterodimers MSH2-MSH3 and MSH2-MSH6 are primarily involved in mitotic mismatch repair, whereas MSH4-MSH5 is involved in resolution of Holliday junctions during meiosis. All members of the MutS family contain the highly conserved Walker A/B ATPase domain, and many share a common mechanism of action. MutS1, MSH2-MSH3, MSH2-MSH6, and MSH4-MSH5 dimerize to form sliding clamps, and recognition of specific DNA structures or lesions results in ADP/ATP exchange.	5.37466e-87
NZ_CP017269.1\|WP_083273582.1\|3199377_3200628_-\|threonine-ammonia-lyase	gnl\|CDD\|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0
NZ_CP017269.1\|WP_069977928.1\|3226455_3227700_+\|S-methyl-5-thioribose-kinase	gnl\|CDD\|236561	PRK09550, mtnK, methylthioribose kinase; Reviewed.	1.37504e-97
NZ_CP017269.1\|WP_069977892.1\|3203092_3205018_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP017269.1\|WP_069977900.1\|3209269_3210589_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|250388	pfam01134, GIDA, Glucose inhibited division protein A.	2.26941e-29
NZ_CP017269.1\|WP_069977890.1\|3197986_3199348_+\|cobalamin-B12-binding-domain-containing-protein	gnl\|CDD\|275160	TIGR04367, protein_of_the_SAM_superfamily, hopanoid C-3 methylase HpnR. Members of this are family are a B12-binding domain/radical SAM domain protein required for 3-methylhopanoid production. Activity was confirmed by mutant phenotype by disrupting this gene in Methylococcus capsulatus strain Bath. This protein family should only occur in genomes that encode a squalene-hopene cyclase (see TIGR01507). [Fatty acid and phospholipid metabolism, Biosynthesis].	7.13111e-35

>NZ_CP017269.1|WP_069977904.1|3211081_3212371_+|hybrid-sensor-histidine-kinase/response-regulator
MKRNTPYKILIVDDNHNNLFSLRTLIEEYIDAEVIEADSGKKALQEISGNVVDLIILDVQMEDMDGFEIASLIKQRKKTKDIPIVFLTASYIGEEFKKRGFQIGAVDYLTKPIDEYQLINRINIYLKLIEKERNMNILLEQKVKEQTSALQKAKEEAEAANAAKDIFLANISHELRTPLNIILGTTQMLNLYLRSDKEIDRDQIRKKVDMQVQNCYRLLRLVNNIIDISKIDTGHFEISMSKCNIVQIVEAIALSVAEYVEDKGIRLIFDTNVEEKIIACDLDAIERIILNLLSNAIKFTQTGGNIYVDVEDLQDRVKISVRDTGIGIEEDKVHLVFERFKQVDELLTRKQEGSGIGLSLIKSLVEMHDGRIYVHSEYQKGSEFIVELPVNLKCMQVSEDCSAGYMPNESVVQKIQVEFSDIYFLDAIG
>NZ_CP017269.1|WP_069977900.1|3209269_3210589_-|FAD-dependent-oxidoreductase
MTKIVVIGGGWAGCAAAVSAAKAGAQVTLLERTDMLLGTGLVGGIMRNNGRFTATEELIAMGGGDLFQICDQHSRHKNISFPGHDHVNLYDIADTHGAVLGHLQHLDVHIVFESRVNKAVMQEKQITAVEDQSGRVFHGDTFIDTTGTAGPMHNCVKYGNGCAMCILRCPSFGGRVSIANLAGIEEMVGKKADGSIGAMSGACKLYKESLSQEIQDALSTKGVAIIPLSQELIEDHLGVKACQQYALQEFKDNIILLDTGHAKLMAPYFSLERLRKIPGFEYARYEDPYAGGKGNSMRYFSMAPRDNHLKVEGVDNLFCAGEKAGLLVGHTEAIITGTLAGHNSVRQALNKPLLQLSKETAIGDAIAFVKEMMTTEAGMGKKYTFSGSIYFERMKEKGLYRKEQKQISKDIEALGYTGIFAQKLIKDMDSEIIKSKICS
>NZ_CP017269.1|WP_069977898.1|3207790_3209155_-|hypothetical-protein
MVQLTMLHYAYFFIVLIIMVTMAFRKDTVLPCILGIFAIGFLSSGSLLTGVQVVYNALIAAGNEFWGIIVVISLVVAMSHALQDIGADELMMAPIKKLMINPVVAFFGLGFMMMFFSWFIWPSPSVALVGAIMLPAALKAGLPPIWAAVAMNIFGHGVALSSDYFIQGAPSITAKAAAIENPLMLIQASIPLWLTMSIVTVACSFFMMRRDMKGFEEIAVAVEAEEITKPTMGVYLVAILTPLIFLLDVYVMYKYKLRGGDATALVGGTAILVMSFVAIVQHSLIDSLEKITDYVRGGFIFGIKIFAPVIIIGAFFFLGSEEIAKQILGENATGLLSDLGMYLADRIALSKFPVAMIQMIIGGITGLDGSGFSGLPLVGSLAQTFSSAISINKESLAVLGQISAIWVGGGTIIPWGIIPVAAICNVSPLDLARKNIIPVAVGLIATFIVSMFIL
>NZ_CP017269.1|WP_069977896.1|3205466_3207650_-|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein
MSEIYKDPSYTPTERAQDLLSRMTMEEKVGQMCQVDGRIDADTWIYEKHIGSFLHVTGDAPIYLQEKAAHTRLGIPIFFGIDAIHGHAFCSGATVFPSPLAMSCSWNPELLETVAHITACEVIMTGLHWTFSPVLCIGRDLRWGRIDETFGEDPYLIGVLARAMIKGYQGEKLSDPYSILACAKHFAAYGETQGGRDSAEADVSERKLRSVFLPPFREAVDAGCATFMAGYNAIDGIPCSANRWLLNDVLKEEWSFKGFVVTDWNNVGHLHTTQKVAPTFEKACEIAVWAGNDMMMSTPDFYEKTVALVKEGVIGEAQLNAACLRILELKFALGLFDHKRFPDRSKAADIVGCEAHKKAAYEAALQSIVLLKNDNHVLPLSKDVKRIALIGPNCENVQSQLGDWSFGTREYPEQPTLDYHPEYDISPIVTVLKGIQQRAGKGIQVVYEKGCDLLDNKEHNFPAAVKAAEESDVIIAVVGDTNTLNGETRDRADLNLTGAQQKLLETLKEIGKPLVVILINGKPLTIPWVKDNADAILEAWNPGMEGGNAVAAILFGDFNPCGKLTISFPCHVGQQPVYYNQLPGWHGGKYVEISEDPLFPFGFGLSYTRYEYSNLTLSSTMLKEDDTLIVSVDICNVGNYTGTEIVQLYVNDLYSSVTIPIKELKGFTRVTLNPGEQQRISIHLPIASLSLVDRQCRSIVEPGEFEIMVGSSSRDEDLLKKVIRVME
>NZ_CP017269.1|WP_069977894.1|3205059_3205323_-|thioredoxin-family-protein
MKPILMFMMDSCPYCKEAFRWMEELKREDSRYQSLEINMIDERLQPDLANQYDYYYVPTYYVDGIKLHEGAATKEKIRSVFENALGK
>NZ_CP017269.1|WP_069977892.1|3203092_3205018_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MNLLSAENLSKSYSEKPLLKHISFGIDEGDKIGIIGINGTGKTTLLKIIAGAEQADEGRLIKGNDVRIEYLPQDICFDTDATVLEQVFRGDSPLMQLIRTYEEALQNPSTSNETIIKLTHDMDTLNAWNLENEAKAVLTKLGITEFSAKIRTLSGGQKKRIALAAALINPSDLLILDEPTNHLDHETIDWLEDYLNRRKGALLMITHDRYFLDRVVNQIIELDQGSLYAYKGNYNNFLEKKLEREELVAANERKRQGLFRKELAWIRRGAKARTTKQKARIERFEKLSASAADLNENRLEISIAGSRLGKKVVELEHIYKAFDEKTVIEDFSYILLRNDRVGILGPNGTGKTTFINILSGKIKPDSGKIEIGETVKIGLFSQETDHMDDHARVIEYIREGSEYLTTADGLKITASQMLERFLFPPSMQWAPIGKLSGGEKRRLYLLRVLMEGPNVLLLDEPTNDLDIETLTILEDYLEDFQGAVIAVSHDRYFLDKVAEKIFVFTGKGRIRQYTGNYTEFKENHIGDLQNTPIENKTAGKDREKESRNNHPSNKNQLNSTKEKTLKFSFKEQREFEEIDGIISGLEAQIQTVEEKIKQTTSEYTLLQQLLEEKEALEKQLDEKMKRWVYLNELAEEIEKRK
>NZ_CP017269.1|WP_069981454.1|3201237_3202950_+|methyl-accepting-chemotaxis-protein
MKWYLNLKTGTKIISGFLILSILIGLVGFIGITNMKVINEGMNVMYHDRLIPIQLLGEIQKNVMSIRMNLFHLLMYENKLSVSEVKKIINELKDETDELIKRYTSIALVEEEEQLLQQFTNHLTEYGYAQSKYVALVESNNMSGAAIAFENIKKTGDAVQQSLDHLINFNNQSGEEIKFRSDDLYKKSVVNMIAIIVGAVIIAVLFGSILSVIITKPLKRSLRFAEDFGNGDLTQQIRIDRRDEIGLLIAALDKSVTNIQSLLKEIILSSSEMHVSSEELSAATEEVLAQMQHIDTATNGISRGTEDASVALEQVSTSSQKVSETTGQLVQKAREGSNAAVEIKQRADQMKREAEQSKEAAEKIYQEKQNKILTAIEDGRVVKEIEVMASGISSIAERINLLSLNAAIEAARAGEHGRGFAVVAEEVRKLAEESSKTVARIQGVIQQVHTAFMNLSGNANEILQFIDEKVKKDYDTLEKTGLQYKKDAEFINELIEDFSLKIERISLITNEVSEAIESVSATSEETTASSQEISSNVSQVVDALEKAAKVSQEQAEIAEKLNEMIQRFKV
>NZ_CP017269.1|WP_083273582.1|3199377_3200628_-|threonine-ammonia-lyase
MKMSNASYSTQVRGGDVADSLQFKEARDRLKNVVEETNLLYSAVFSSEFGNNVYIKPENLQKTGAFKIRGAYNKISKLSLKERQKGLISSSAGNHAQGVAYAAQQLGVKATLVMPKTTPLIKVEATRNYGAQVVLSGDCYDEAYAEALRLQKENQSLFIHPFNDLDVIEGQGTIGLEILEELENVDCILVPIGGGGLIAGIAAAVKSLRPDIKIIGVEPEGAKAMKLSMENNKLTYLKTVDTIADGVAVKKPGDLTFSIIKDYVDEIVTVSDFDIMEAFLLLLEKHKLIGENAGVLSLAGLKKIQEKNKNVVCVVSGGNIDVLTISSLINRGLVSRGRIFCFSVDLPDKPGELLRISEILAKLNANVIKLNHNQFKSLDRLMDVQLEVTVETNGHKHIEQIIHEMSQMGYEIEKVY
>NZ_CP017269.1|WP_069977890.1|3197986_3199348_+|cobalamin-B12-binding-domain-containing-protein
MKVLLVRPPRMKQAITLGEFMYSEPIGLEMIYAMLEERHEVEILDLMSEGESLEAKLSGFHPEAVGITTLCIDVPAVKDLAERVKQVNPEIITIIGGTQTYLNSEAFFIDAVDHVMKYTTRENVEKLFSYLENKESPPLLDGVCSRSNGFQSTKVCGINEYIHPNRTSTAKYRSQYSYFGYKPAAIMGTAQGCAKTCRFCLRWRIEGYTEKYFPLDFVKEEIRSIQEDTIMVFDNDLLHNGERIEALCDFLEEEKIYKNFICYASVNSILKNQTAIRRFKGLGLKAVLVGYETFKQEELEAYEKKSSIEDNLKASRFMKEIGLDVWASFMLHPDWSTEDFKGLRKYLKALQPEISTFSPLTPFPNLPLYGEYKERLLVEKEDYESWSFGQVIIRPSKMSLQRYYYEMLKTNLYVNLFQNNTGYMIRKFGFNTVFRLGKGSIKLLRRYMKLMMQ
>NZ_CP017269.1|WP_069977888.1|3196656_3197973_+|B12-binding-domain-containing-radical-SAM-protein
MKKLLLIQSTPYDGDRKLIKKKKLYFVGLGLPLLAALTPEDWQVEIILETIEDIPFDTDADLIAIGSMGHAVIRSIDIATEFKRRGKTVIMGGYMVSLMAEEAKQYCDSVVIGDAEKIWKRLLRDYETNNLKDFYREELTALSTPPPRFDLIVEKNIGDFLPVQAGRGCPNSCSFCSVYCLYKNRYLKRDIAEVVRDIRQVKELGFRKFLLLDDNIVSDREYLMALCKEIKSLGMEWTSQCSITIGEDSELLQWVAESGCTALSFGLESISAESLQCMDKAWAKPARYAELIKNIQEAGIDISTEMVVGADGDTLQSIKETARFIEANKVVVPRFYILTPIPGTKYYDKMKDENRICNEDMYSYNGSEAVHIPKNMSPEKLTRAYWELYNEVFSFVSIFKRTILRKEFLKKKDRYLFYFLVNLYYRYQIKRKITPNII
>NZ_CP017269.1|WP_069977911.1|3215964_3217119_+|protein-glutamate-O-methyltransferase-CheR
MNINIHYDGKGIRHMAIIGELDTREKIQQLLSHMEQNIEETHITFFDSSILHWSIIEKLYALQKHKRSRVFVLKPYLYAYLSKIGIRSYYVAQEPEGCKKESEVTTRNSKALYAQQVMDFLTAIYDQYGYDYTQYQIDSIMRRIKLCMLKENIQSFEVFKRVVLENEEVFERLFLDFSINITDFFRDPEVFAAIRDKILPYLDSFHHIKIWCAGCSTGQEAYSLAIMLDELNMLNKTQIYATDINPFVVEEAENGLYPLAGIENNIRNYRNAKGSKSFMKYFKVKETYMEIDVRLKKSILFFQHSLVNSGSINEFQLILCRNVLIYFSPDLQKNILKNFYCSLNQNGFLILGKREGILNNGGHQYFCNYDPENRMFRRRALKEA
>NZ_CP017269.1|WP_069977913.1|3217364_3218723_-|PFL-family-protein
MINYKNIMETIRMIEKEKLDIRTITMGISLLDCCDSDGKKSRIKIYDKITKCAENLVKVGDEIETEYGIPIINKRISVTPIALVAQSSQDPDYVAYAKTLDQAAETVGINFIGGYSALVQKGYTKGDRTLIHSIPEALSVTEKVCASINVGCTKSGINMDAVRDLGLIIKKTADLTKDRDSIGCAKLVVFANAVEDNPFMAGAFHGVGEAECIINVGISGPGVVKSALEGTKGQPFDVVAETIKKTAFKITRVGQLVAQEASKRLQVPFGIVDLSLAPTPAIGDSVGRILEEMGLESCGCHGTTAALALLNDAVKKGGIMASSHVGGLSGAFIPVSEDEGMIHAVNIGSLSLDKLEAMTAVCSVGIDMVAVPGDTPASTLSAIIADEAAIGVINNKTTGVRIIPVHGKSLGDTVEFGGLLGHAPIMAVSKFSSNDFISRGGRIPAPVHSFKN
>NZ_CP017269.1|WP_069977914.1|3218738_3219008_-|ACT-domain-containing-protein
MKAFITVIGKDKIGIIHGVTTVLKAYQINILDITQTLLQEYFTMIMLVDLESMTIDFKELKTKLEESGQDLGMSIRIQHEDIFHSMHTI
>NZ_CP017269.1|WP_069977919.1|3219354_3220944_-|ATP-binding-cassette-domain-containing-protein
MITVTNISLRYGERKLFEDVNLKFTPGNCYGVIGANGAGKSTFLKILSGEIEPNTGDVSIPSTIRMSVLKQDHYQYDENQVLETVIMGNARLYEIMKEKDAIYAKEDFTDEDGIKASELEGEFAELNGWEAEAEASSLLQGLGIGTALHDKKVADLSGAEKVKVLLAQALFGKPGILILDEPTNHLDIKSINWLEEFLIEFEGIVIVVSHDRHFLNKVCTHMADVDFGKIKLFVGNYDFWYESSQLALQMMKDQNKKKEEKIKELQEFIARFSANASKSKQATSRKKLLEKITIDDIQPSSRKYPYVGFKPEREVGNDILFVEGLTKTIDGEKILDNVSFTVSKGDKIAFVGSREIVNTTLFKILMGEMEADSGTFKWGVTITKAYFPKDNSEFFNDVELNLVDWMRQFSEEKSESYLRGFLGRMLFSGEEALKQAKVLSGGERVRCMLSRMMLSSANVLILDQPTNHLDLESITAVNNGLRDFKSNVLFTSHDHQFIQTIANRIIEITPSGIIDKQMTYDEYLESIGL
>NZ_CP017269.1|WP_069977924.1|3221171_3223025_+|DNA-mismatch-repair-protein
MKTAKETYKKRIEHYEKKSSKLLKEMNRVSHLRIFTAAAAVFSMIFLSKTAINYVTWGIGFLFFIIFIYLVYMHHRMKSVNRYLIMLKEVNETSMKRINGEWKEFPDKGDVFQEEDHDFSKDLDIFGQGSLYQWTSTANTCMGKAKLAEMLTSPCKDKVQIEERQAAIQELAQKRWWRQRLQAESMLKGEEAQDIEELLQWAENDHPLYSRTWVRIFLRLLPVVTTITLLLAFSTNLLARYIPLLLLAVHFFLLSYDVKKRTQELALIYRCKNSIKVYGKILSHFEKVHFESSYLGSLKERLMDSRGVTAVAQIKKLEGVVDQILNRNNMAFFPINLLVLWDYQCMLAVEDWKQQAGPMLRRYLEVIGEIEGLASLALIRYDYPQWVMPEITKTPSRLNAKTIGHPLLTNKQVCNDVAIDTPAKVLLITGSNMSGKSTLLRTLGINLVLAYAGAPVCAKIMECSMLQIYTCMRISDNLEKSISSFYGELLRIKRIVEASKKDGQVFFLLDEIFKGTNSHDRHMGAKMLIQQLHHNNAIGLVSTHDLELGELEKESGQIVKNYHFQEHYRDNQIYFDYKLRPGISTTRNALYLMKMAGVEFEDGEEVLAEKHAVNAKP
>NZ_CP017269.1|WP_069977926.1|3223116_3224079_+|1,4-dihydroxy-2-naphthoate-polyprenyltransferase
MSLSCFLKLVEIQTKVASAIPFSLGTLYALYRFQQFNLKNFLLMFISLLAFDMVTTVINNYLDYKKAIKTHGFNYETHNAIVKYDLKESIVIATIAILLAIAVCVGFLLFLNTNKVVLLLGVISFIVGVLYSFGPMPISRMPLGEIFSGLFMGFVIVFISAYIHVYDKNIITLLYHDGMLRLEMNIVELLYLFLMSVPAVMGIANIMLANNICDIEDDMENKRYTLPIYIGKENALKLFKALYYITYADIILLLIVGVEPMISLLMLLTLIPVRKNLKIFYERQTKRDTFILAVKNFIIINVSRIFTIGTALLINFFLIH
>NZ_CP017269.1|WP_069981455.1|3224093_3226283_+|DNA-topoisomerase-III
MSKAIVLAEKPSVGRDIARVLNCNKKGNGYFEGERYIVTWALGHLVTLADPEVYDQKYAAWKIEDLPMLPQHLKLVVIKQSSKQYHTVKELMGRRDVNEIIIATDAGREGELVARWIIEKAQVKKPIKRLWISSVTDKAIREGFQKLRNGKEYENLYASAVARSEADWLVGINATRALTCKYNAQLSCGRVQTPTLAIIARREQEIQSFQPKTFYGITADTEKLKLTWQDKQSKDVKSFDKDKVDKILIDLQKKDAQVIEVDKVHKKSFSPQLYDLTELQRDANRVFGYSAKETLSIMQKLYEQHKLLTYPRTDSRYLSTDIVDTLKDRIKGCSVGPYAAIGGKLLRQPVKANKSFVDDGKVSDHHAIIPTEQTAFLGDLNDKERKIYDLVVKRFFAVLYPPFEYEQTTIKAKIGEELFIAKGKRVIAQGWKEVYGNHFEEEGQKEDVSEQTLPLVNQGDKLPVIVLVQTKGQTKPPAPFNEGTLLSAMENPVKYMAGEAKELIKTIGETGGLGTVATRADIIEKLFNSFLIEKRGKDIWITSKGKQLLELVPEELKSPSLTAQWEQKLGAIAKGSLKKDTFLQEMRIYAKEVVQEIKNSEENFRHDNLTKTKCPECGKYMLEVKGKKGKMLVCQDRDCGHRKRLATVTNARCPNCHKKLELRGEGEGQIFVCPCGHREKLSAFQERKKQDSNKVSKKDVAKYLNQQKKVQDEPVNTALAEALAKLKLK
>NZ_CP017269.1|WP_069977928.1|3226455_3227700_+|S-methyl-5-thioribose-kinase
MMIITTDNIVEYVLKNTELFTTRQLCVEDISDFNPQEEKEGFVNYIYRVYNHEKSVIVKQARPYLKYFGESYTLTPLRNLLEHETLKLRGGIVPQYTPKTFFIDKENNIFIMEDLSYLKVMRFQLNKMMYFPKFSKQIGEYLAKSNFYTSELYLDAETHRLLQASFINADMRSIMENAAFIRGAFAEIDYNTPNKRLLNVSERVWSKEEIILECYKMRDIFMKRGECLIHGDLHTSNIFIDCDRMKIIDMEYTFMGPYSFDMGYLIANFVSQFSAFTFKSNIGEEQKENYCCYLLNTIKEMYEYYVHYFNECWEKDLKEEYRSVKGYKESILDTFLSEVIGFAACANMIRLISLAGYPDYDVMEEMADKCNAQGLSIVIDQFMLLNRSKIKSIDELIHIILDIRKDYIKNTLLK
>NZ_CP017269.1|WP_156782410.1|3227925_3228084_+|hypothetical-protein
MKYKNPYGIDVLQQNERENKKRLERLESYIKQIADDLKDMELKLEQFEALGK
>NZ_CP017269.1|WP_069977931.1|3228169_3229246_-|aminopeptidase-P-family-protein
MHKERVEKVLSAMQQQHISQMIISDPASIFYLLGKWIHPGERMLVLYLSLEENHKLFINELFPVHEDLGVDKVWFKDTDQPVTLLAQHMEGENVVGIDKNWPSHFLLTLMEHKSDCNYVNGSLLIDQIRSVKDSLERDLMRKASSFNDTAMGSIIHLLSSTHTEKEMAQKLLAIYEELGTEGPSFDPIIAYGANAADPHHGPGNGILKEGDSIIIDIGCKHASYCADMTRTFFYKSASEKAQKVYNIVKEANARAISIIKPGVRFCDIDAAARSYIEEQGYGKYFTHRTGHSIGIEVHDFGDVSAVNTDSVAPGMIFSIEPGIYLPGEFGVRIEDLVLVTEDGCEVLNKFSKELSVIG

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Crispr_ID: NZ_CP017269_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017269_4

3341917-3345719

Unclear

Consensus_repeat	Method
GTTTTATCTGCACTACGTGAGATGTAAAT	CRT
GTTTTATCTGCACTACGTGAGATGTAAAT	PILER-CR
GTTTTATCTGCACTACGTGAGATGTAAAT	CRISPRCasFinder

57 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

The CRISPR arrays of NZ_CP017269_4

>merge|NZ_CP017269|4|3341917-3345719|CRT,PILER-CR,CRISPRCasFinder
GGTTTACTGCAACAAAGTGAGTTTTAAACAGTTCTCAAAGCAACGCAAATCGGCTAAAATGAATATATACAGCTATTTTAGTTTTTGGGGTTTTATCTGCACTACGTGAGATGTAAATTCGTGTAATCTGAGCAAACTTATTGAAATGTGGCTGGTTTTATCTGCACTACGTGAGATGTAAATTTAAGTAAAGGATGTGGATACTGTGGATATTGGAGAGTTTTATCTGCACTACGTGAGATGTAAATGAATACTACATAATTGACATGGATTTTGCAGGCAAAGTTTTATCTGCACTACGTGAGATGTAAATGTTAGATGATGGTTATATCACCTTCTTCGATCTATTCGGTTTTATCTGCACTACGTGAGATGTAAATCTGGAACTCTCCCTGCTTCCACATTGACCCCAAGTGTTTTATCTGCACTACGTGAGATGTAAATTATAAACATAATGAGAAATGGTATTATGACAAGCAAGTTTTATCTGCACTACGTGAGATGTAAATTATAATAGCAGCATACTGAAGCATGATATTATCCCAGTTTTATCTGCACTACGTGAGATGTAAATTAAATGCGACAGCTCTTATGTATGGTATAGGAAGGTAAGTTTTATCTGCACTACGTGAGATGTAAATTCGGCATGGGGAGAGATCGGACGAAAGTTGATGATTCGTTTTATCTGCACTACGTGAGATGTAAATTGCTTTTGTTCCAATTTGGAGTGATTCTGAAAATAAGTTTTATCTGCACTACGTGAGATGTAAATCTGATACTTAGTGTAGGATACAATACCCTTAGGTACGTTTTATCTGCACTACGTGAGATGTAAATCTATATATTTCTTTTTTATTTACATTCTTTTCATTCGTTTTATCTGCACTACGTGAGATGTAAATTAGTTCTCCTGTCGTAAAGGCGAACCATGCACCGATTGTTTTATCTGCACTACGTGAGATGTAAATTCGTATCCAACCTTTTCAACTAGCTTACATACCTTTTCGTTTTATCTGCACTACGTGAGATGTAAATCAAGCAGAAGAAAGGGCAGTGGCAGAGGAAAGGGCATGTTTTATCTGCACTACGTGAGATGTAAATGATGCTAACTCGAGAATTTCATCAGTATCTCCTTCTGCGTTTTATCTGCACTACGTGAGATGTAAATTAATATCTTCCACTTTATTCACCTCCTTCCAGGCTTGGTTTTATCTGCACTACGTGAGATGTAAATTATTTTGCAAGGCTTTTACAGTAGCTTCAAAAGCTTCGTTTTATCTGCACTACGTGAGATGTAAATCAATCTTTTTTAGCAAATGCATTTTCTAACTTACTCAGTTTTATCTGCACTACGTGAGATGTAAATTTGGAAGATTGATAAGGTTAAGGATAAAGACGTACAGTTTTATCTGCACTACGTGAGATGTAAATTTAGATTTGTATTAACTTTATTTTCTTGAATGTCTTTGTTTTATCTGCACTACGTGAGATGTAAATGTTAAAACCTTGTTAAGTTTTTTATTCATTCTATTAAGTTTTATCTGCACTACGTGAGATGTAAATTATAGAGTCTTTTCTAATTCTTTTATATATCTTTTCGTTTTATCTGCACTACGTGAGATGTAAATTTAGTCTAGCTCATAAGCGTCAGCATAAAAAAAGGCAAGTTTTATCTGCACTACGTGAGATGTAAATTCCTAGGCCTTTGCTGTTCCATGCTTCTATCCATCTGTTTTATCTGCACTACGTGAGATGTAAATTGGGATTATCAATATATACAACATTCGGAAGGAAATGAGTTTTATCTGCACTACGTGAGATGTAAATTAATGATCTATGATGGAAATATTCTTATTTGGAATTTTGTTTTATCTGCACTACGTGAGATGTAAATCAGCGATAGCAAGGGAAAGGCATGAGAAGCGAACAAGTTTTATCTGCACTACGTGAGATGTAAATTTGATTAGCCGGCGCAGGAAGCCCTCTGTTGAGTTTACAGGTTTTATCTGCACTACGTGAGATGTAAATATTAAACAGCAGCCTAAACAAACTAAATTTCATACACCAGTTTTATCTGCACTACGTGAGATGTAAATTGTAAAACTACTAGAATATGTCACATTTTCAGCCAAGTTTTATCTGCACTACGTGAGATGTAAATGTCTTCACTAACCTTATGATAAGGACGATCTTTTGTAGAGTTTTATCTGCACTACGTGAGATGTAAATGAGTTTAAGGACCCACAAGCAGGTTTCACCTTCCAGAGTTTTATCTGCACTACGTGAGATGTAAATAAATAGAAAGGTTCTTGATCTTTCAGATATGGTTTTGTTTTATCTGCACTACGTGAGATGTAAATAGGATAAGGATGGAAAATTAGCTCTTGAAGTTTGTACAGTTTTATCTGCACTACGTGAGATGTAAATAGGGTAGTAATGGATACACATCCGCATTGCAGATGCGTTTTATCTGCACTACGTGAGATGTAAATTAATTCTCTATAGGAAGGAGGTATCCTGCATATTTCGTTTTATCTGCACTACGTGAGATGTAAATGGGTGCAACAGAGATTATTACTGGTGAATTCATCAAGTTTTATCTGCACTACGTGAGATGTAAATCGGAAGATAATGAACCGAGGATTTTTTATGCTCAAAGTTTTATCTGCACTACGTGAGATGTAAATTAAGTCAGAAGCTTCTGAGAAAGTCATAACATCATGGTTTTATCTGCACTACGTGAGATGTAAATCTCAACTTGGGATACACTAAACAATATCACTAAGTATGTTTTATCTGCACTACGTGAGATGTAAATCATAAAGATTGGAATTATGTGATTTTTTATAATAATTGTTTTATCTGCACTACGTGAGATGTAAATTATATTCGCTCCCTTTATGTATGGTTGCCGAGTTTCGTTTTATCTGCACTACGTGAGATGTAAATATACCACAAACACCATACAATCACCAAAAAGTATACAGTTTTATCTGCACTACGTGAGATGTAAATCGAATATCCTTCTTCGCACCATATGGCCTCTATTGGTTTTATCTGCACTACGTGAGATGTAAATCTGTCTTTCCCCATACAACAATTCTGAAAAAATCTGCGTTTTATCTGCACTACGTGAGATGTAAATATCATAAGCATTATCAGGTCTAACGCATCCACTTCGTTTTATCTGCACTACGTGAGATGTAAATTGAAACATGATAAATTGCTCCCGGGTAAACAGGTCGAGTTTTATCTGCACTACGTGAGATGTAAATTAAAAGAACTTGGTAAGACAAATAGTAAAAAAGATAGGTTTTATCTGCACTACGTGAGATGTAAATTACAAACATATTCTATAAGATCATGGATGCTTACTTGTGTTTTATCTGCACTACGTGAGATGTAAATGGGGTAACAAAAGCAGATACAGAACCAGAACTCGTATGTTTTATCTGCACTACGTGAGATGTAAATATGTTTCGGCAGAAGTGGCTTGACTTTTTTACGCAACGTTTTATCTGCACTACGTGAGATGTAAATGGTATTACCACCTGCATCAGTAGCAGTACCCCTCCAGGTTTTATCTGCACTACGTGAGATGTAAATCATAAAAAACCTTTATTCTGTCATCCACTTCTTTTTGTTTTATCTGCACTACGTGAGATGTAAATATATTGTACCTCTACAAAAAGTGTTATCCTGAAAATGTTTTATCTGCACTACGTGAGATGTAAAGTTAAGGGCCCGAATAACAATGAAGCCAAGAAAAATATCGTTTTATCTGTATTACGTGAAATAGAAAG

>NZ_CP017269|4|1|3341917-3345719|CRT
GGTTTACTGCAACAAAGTGAGTTTTAAAC	AGTTCTCAAAGCAACGCAAATCGGCTAAAATGAATATATACAGCTATTTTAGTTTTTGGG
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGTGTAATCTGAGCAAACTTATTGAAATGTGGCTG
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAAGTAAAGGATGTGGATACTGTGGATATTGGAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	GAATACTACATAATTGACATGGATTTTGCAGGCAAA
GTTTTATCTGCACTACGTGAGATGTAAAT	GTTAGATGATGGTTATATCACCTTCTTCGATCTATTCG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGGAACTCTCCCTGCTTCCACATTGACCCCAAGT
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAAACATAATGAGAAATGGTATTATGACAAGCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAATAGCAGCATACTGAAGCATGATATTATCCCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAATGCGACAGCTCTTATGTATGGTATAGGAAGGTAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGGCATGGGGAGAGATCGGACGAAAGTTGATGATTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TGCTTTTGTTCCAATTTGGAGTGATTCTGAAAATAA
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGATACTTAGTGTAGGATACAATACCCTTAGGTAC
GTTTTATCTGCACTACGTGAGATGTAAAT	CTATATATTTCTTTTTTATTTACATTCTTTTCATTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAGTTCTCCTGTCGTAAAGGCGAACCATGCACCGATT
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGTATCCAACCTTTTCAACTAGCTTACATACCTTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	CAAGCAGAAGAAAGGGCAGTGGCAGAGGAAAGGGCAT
GTTTTATCTGCACTACGTGAGATGTAAAT	GATGCTAACTCGAGAATTTCATCAGTATCTCCTTCTGC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATATCTTCCACTTTATTCACCTCCTTCCAGGCTTG
GTTTTATCTGCACTACGTGAGATGTAAAT	TATTTTGCAAGGCTTTTACAGTAGCTTCAAAAGCTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	CAATCTTTTTTAGCAAATGCATTTTCTAACTTACTCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTGGAAGATTGATAAGGTTAAGGATAAAGACGTACA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAGATTTGTATTAACTTTATTTTCTTGAATGTCTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	GTTAAAACCTTGTTAAGTTTTTTATTCATTCTATTAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAGAGTCTTTTCTAATTCTTTTATATATCTTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAGTCTAGCTCATAAGCGTCAGCATAAAAAAAGGCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TCCTAGGCCTTTGCTGTTCCATGCTTCTATCCATCT
GTTTTATCTGCACTACGTGAGATGTAAAT	TGGGATTATCAATATATACAACATTCGGAAGGAAATGA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATGATCTATGATGGAAATATTCTTATTTGGAATTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	CAGCGATAGCAAGGGAAAGGCATGAGAAGCGAACAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTGATTAGCCGGCGCAGGAAGCCCTCTGTTGAGTTTACAG
GTTTTATCTGCACTACGTGAGATGTAAAT	ATTAAACAGCAGCCTAAACAAACTAAATTTCATACACCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TGTAAAACTACTAGAATATGTCACATTTTCAGCCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	GTCTTCACTAACCTTATGATAAGGACGATCTTTTGTAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	GAGTTTAAGGACCCACAAGCAGGTTTCACCTTCCAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	AAATAGAAAGGTTCTTGATCTTTCAGATATGGTTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	AGGATAAGGATGGAAAATTAGCTCTTGAAGTTTGTACA
GTTTTATCTGCACTACGTGAGATGTAAAT	AGGGTAGTAATGGATACACATCCGCATTGCAGATGC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATTCTCTATAGGAAGGAGGTATCCTGCATATTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	GGGTGCAACAGAGATTATTACTGGTGAATTCATCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	CGGAAGATAATGAACCGAGGATTTTTTATGCTCAAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAGTCAGAAGCTTCTGAGAAAGTCATAACATCATG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTCAACTTGGGATACACTAAACAATATCACTAAGTAT
GTTTTATCTGCACTACGTGAGATGTAAAT	CATAAAGATTGGAATTATGTGATTTTTTATAATAATT
GTTTTATCTGCACTACGTGAGATGTAAAT	TATATTCGCTCCCTTTATGTATGGTTGCCGAGTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	ATACCACAAACACCATACAATCACCAAAAAGTATACA
GTTTTATCTGCACTACGTGAGATGTAAAT	CGAATATCCTTCTTCGCACCATATGGCCTCTATTG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGTCTTTCCCCATACAACAATTCTGAAAAAATCTGC
GTTTTATCTGCACTACGTGAGATGTAAAT	ATCATAAGCATTATCAGGTCTAACGCATCCACTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TGAAACATGATAAATTGCTCCCGGGTAAACAGGTCGA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAAAGAACTTGGTAAGACAAATAGTAAAAAAGATAG
GTTTTATCTGCACTACGTGAGATGTAAAT	TACAAACATATTCTATAAGATCATGGATGCTTACTTGT
GTTTTATCTGCACTACGTGAGATGTAAAT	GGGGTAACAAAAGCAGATACAGAACCAGAACTCGTAT
GTTTTATCTGCACTACGTGAGATGTAAAT	ATGTTTCGGCAGAAGTGGCTTGACTTTTTTACGCAAC
GTTTTATCTGCACTACGTGAGATGTAAAT	GGTATTACCACCTGCATCAGTAGCAGTACCCCTCCAG
GTTTTATCTGCACTACGTGAGATGTAAAT	CATAAAAAACCTTTATTCTGTCATCCACTTCTTTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	ATATTGTACCTCTACAAAAAGTGTTATCCTGAAAAT
GTTTTATCTGCACTACGTGAGATGTAAAG	TTAAGGGCCCGAATAACAATGAAGCCAAGAAAAATATC
GTTTTATCTGTATTACGTGAAATAGAAAG

>NZ_CP017269|4|1|3342006-3345652|PILER-CR
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGTGTAATCTGAGCAAACTTATTGAAATGTGGCTG
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAAGTAAAGGATGTGGATACTGTGGATATTGGAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	GAATACTACATAATTGACATGGATTTTGCAGGCAAA
GTTTTATCTGCACTACGTGAGATGTAAAT	GTTAGATGATGGTTATATCACCTTCTTCGATCTATTCG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGGAACTCTCCCTGCTTCCACATTGACCCCAAGT
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAAACATAATGAGAAATGGTATTATGACAAGCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAATAGCAGCATACTGAAGCATGATATTATCCCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAATGCGACAGCTCTTATGTATGGTATAGGAAGGTAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGGCATGGGGAGAGATCGGACGAAAGTTGATGATTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TGCTTTTGTTCCAATTTGGAGTGATTCTGAAAATAA
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGATACTTAGTGTAGGATACAATACCCTTAGGTAC
GTTTTATCTGCACTACGTGAGATGTAAAT	CTATATATTTCTTTTTTATTTACATTCTTTTCATTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAGTTCTCCTGTCGTAAAGGCGAACCATGCACCGATT
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGTATCCAACCTTTTCAACTAGCTTACATACCTTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	CAAGCAGAAGAAAGGGCAGTGGCAGAGGAAAGGGCAT
GTTTTATCTGCACTACGTGAGATGTAAAT	GATGCTAACTCGAGAATTTCATCAGTATCTCCTTCTGC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATATCTTCCACTTTATTCACCTCCTTCCAGGCTTG
GTTTTATCTGCACTACGTGAGATGTAAAT	TATTTTGCAAGGCTTTTACAGTAGCTTCAAAAGCTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	CAATCTTTTTTAGCAAATGCATTTTCTAACTTACTCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTGGAAGATTGATAAGGTTAAGGATAAAGACGTACA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAGATTTGTATTAACTTTATTTTCTTGAATGTCTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	GTTAAAACCTTGTTAAGTTTTTTATTCATTCTATTAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAGAGTCTTTTCTAATTCTTTTATATATCTTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAGTCTAGCTCATAAGCGTCAGCATAAAAAAAGGCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TCCTAGGCCTTTGCTGTTCCATGCTTCTATCCATCT
GTTTTATCTGCACTACGTGAGATGTAAAT	TGGGATTATCAATATATACAACATTCGGAAGGAAATGA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATGATCTATGATGGAAATATTCTTATTTGGAATTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	CAGCGATAGCAAGGGAAAGGCATGAGAAGCGAACAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTGATTAGCCGGCGCAGGAAGCCCTCTGTTGAGTTTACAG
GTTTTATCTGCACTACGTGAGATGTAAAT	ATTAAACAGCAGCCTAAACAAACTAAATTTCATACACCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TGTAAAACTACTAGAATATGTCACATTTTCAGCCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	GTCTTCACTAACCTTATGATAAGGACGATCTTTTGTAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	GAGTTTAAGGACCCACAAGCAGGTTTCACCTTCCAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	AAATAGAAAGGTTCTTGATCTTTCAGATATGGTTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	AGGATAAGGATGGAAAATTAGCTCTTGAAGTTTGTACA
GTTTTATCTGCACTACGTGAGATGTAAAT	AGGGTAGTAATGGATACACATCCGCATTGCAGATGC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATTCTCTATAGGAAGGAGGTATCCTGCATATTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	GGGTGCAACAGAGATTATTACTGGTGAATTCATCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	CGGAAGATAATGAACCGAGGATTTTTTATGCTCAAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAGTCAGAAGCTTCTGAGAAAGTCATAACATCATG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTCAACTTGGGATACACTAAACAATATCACTAAGTAT
GTTTTATCTGCACTACGTGAGATGTAAAT	CATAAAGATTGGAATTATGTGATTTTTTATAATAATT
GTTTTATCTGCACTACGTGAGATGTAAAT	TATATTCGCTCCCTTTATGTATGGTTGCCGAGTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	ATACCACAAACACCATACAATCACCAAAAAGTATACA
GTTTTATCTGCACTACGTGAGATGTAAAT	CGAATATCCTTCTTCGCACCATATGGCCTCTATTG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGTCTTTCCCCATACAACAATTCTGAAAAAATCTGC
GTTTTATCTGCACTACGTGAGATGTAAAT	ATCATAAGCATTATCAGGTCTAACGCATCCACTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TGAAACATGATAAATTGCTCCCGGGTAAACAGGTCGA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAAAGAACTTGGTAAGACAAATAGTAAAAAAGATAG
GTTTTATCTGCACTACGTGAGATGTAAAT	TACAAACATATTCTATAAGATCATGGATGCTTACTTGT
GTTTTATCTGCACTACGTGAGATGTAAAT	GGGGTAACAAAAGCAGATACAGAACCAGAACTCGTAT
GTTTTATCTGCACTACGTGAGATGTAAAT	ATGTTTCGGCAGAAGTGGCTTGACTTTTTTACGCAAC
GTTTTATCTGCACTACGTGAGATGTAAAT	GGTATTACCACCTGCATCAGTAGCAGTACCCCTCCAG
GTTTTATCTGCACTACGTGAGATGTAAAT	CATAAAAAACCTTTATTCTGTCATCCACTTCTTTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	ATATTGTACCTCTACAAAAAGTGTTATCCTGAAAAT
GTTTTATCTGCACTACGTGAGATGTAAAG

>NZ_CP017269|4|4|3342006-3345719|CRISPRCasFinder
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGTGTAATCTGAGCAAACTTATTGAAATGTGGCTG
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAAGTAAAGGATGTGGATACTGTGGATATTGGAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	GAATACTACATAATTGACATGGATTTTGCAGGCAAA
GTTTTATCTGCACTACGTGAGATGTAAAT	GTTAGATGATGGTTATATCACCTTCTTCGATCTATTCG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGGAACTCTCCCTGCTTCCACATTGACCCCAAGT
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAAACATAATGAGAAATGGTATTATGACAAGCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAATAGCAGCATACTGAAGCATGATATTATCCCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAATGCGACAGCTCTTATGTATGGTATAGGAAGGTAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGGCATGGGGAGAGATCGGACGAAAGTTGATGATTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TGCTTTTGTTCCAATTTGGAGTGATTCTGAAAATAA
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGATACTTAGTGTAGGATACAATACCCTTAGGTAC
GTTTTATCTGCACTACGTGAGATGTAAAT	CTATATATTTCTTTTTTATTTACATTCTTTTCATTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAGTTCTCCTGTCGTAAAGGCGAACCATGCACCGATT
GTTTTATCTGCACTACGTGAGATGTAAAT	TCGTATCCAACCTTTTCAACTAGCTTACATACCTTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	CAAGCAGAAGAAAGGGCAGTGGCAGAGGAAAGGGCAT
GTTTTATCTGCACTACGTGAGATGTAAAT	GATGCTAACTCGAGAATTTCATCAGTATCTCCTTCTGC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATATCTTCCACTTTATTCACCTCCTTCCAGGCTTG
GTTTTATCTGCACTACGTGAGATGTAAAT	TATTTTGCAAGGCTTTTACAGTAGCTTCAAAAGCTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	CAATCTTTTTTAGCAAATGCATTTTCTAACTTACTCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTGGAAGATTGATAAGGTTAAGGATAAAGACGTACA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAGATTTGTATTAACTTTATTTTCTTGAATGTCTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	GTTAAAACCTTGTTAAGTTTTTTATTCATTCTATTAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TATAGAGTCTTTTCTAATTCTTTTATATATCTTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TTAGTCTAGCTCATAAGCGTCAGCATAAAAAAAGGCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TCCTAGGCCTTTGCTGTTCCATGCTTCTATCCATCT
GTTTTATCTGCACTACGTGAGATGTAAAT	TGGGATTATCAATATATACAACATTCGGAAGGAAATGA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATGATCTATGATGGAAATATTCTTATTTGGAATTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	CAGCGATAGCAAGGGAAAGGCATGAGAAGCGAACAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TTGATTAGCCGGCGCAGGAAGCCCTCTGTTGAGTTTACAG
GTTTTATCTGCACTACGTGAGATGTAAAT	ATTAAACAGCAGCCTAAACAAACTAAATTTCATACACCA
GTTTTATCTGCACTACGTGAGATGTAAAT	TGTAAAACTACTAGAATATGTCACATTTTCAGCCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	GTCTTCACTAACCTTATGATAAGGACGATCTTTTGTAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	GAGTTTAAGGACCCACAAGCAGGTTTCACCTTCCAGA
GTTTTATCTGCACTACGTGAGATGTAAAT	AAATAGAAAGGTTCTTGATCTTTCAGATATGGTTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	AGGATAAGGATGGAAAATTAGCTCTTGAAGTTTGTACA
GTTTTATCTGCACTACGTGAGATGTAAAT	AGGGTAGTAATGGATACACATCCGCATTGCAGATGC
GTTTTATCTGCACTACGTGAGATGTAAAT	TAATTCTCTATAGGAAGGAGGTATCCTGCATATTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	GGGTGCAACAGAGATTATTACTGGTGAATTCATCAA
GTTTTATCTGCACTACGTGAGATGTAAAT	CGGAAGATAATGAACCGAGGATTTTTTATGCTCAAA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAGTCAGAAGCTTCTGAGAAAGTCATAACATCATG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTCAACTTGGGATACACTAAACAATATCACTAAGTAT
GTTTTATCTGCACTACGTGAGATGTAAAT	CATAAAGATTGGAATTATGTGATTTTTTATAATAATT
GTTTTATCTGCACTACGTGAGATGTAAAT	TATATTCGCTCCCTTTATGTATGGTTGCCGAGTTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	ATACCACAAACACCATACAATCACCAAAAAGTATACA
GTTTTATCTGCACTACGTGAGATGTAAAT	CGAATATCCTTCTTCGCACCATATGGCCTCTATTG
GTTTTATCTGCACTACGTGAGATGTAAAT	CTGTCTTTCCCCATACAACAATTCTGAAAAAATCTGC
GTTTTATCTGCACTACGTGAGATGTAAAT	ATCATAAGCATTATCAGGTCTAACGCATCCACTTC
GTTTTATCTGCACTACGTGAGATGTAAAT	TGAAACATGATAAATTGCTCCCGGGTAAACAGGTCGA
GTTTTATCTGCACTACGTGAGATGTAAAT	TAAAAGAACTTGGTAAGACAAATAGTAAAAAAGATAG
GTTTTATCTGCACTACGTGAGATGTAAAT	TACAAACATATTCTATAAGATCATGGATGCTTACTTGT
GTTTTATCTGCACTACGTGAGATGTAAAT	GGGGTAACAAAAGCAGATACAGAACCAGAACTCGTAT
GTTTTATCTGCACTACGTGAGATGTAAAT	ATGTTTCGGCAGAAGTGGCTTGACTTTTTTACGCAAC
GTTTTATCTGCACTACGTGAGATGTAAAT	GGTATTACCACCTGCATCAGTAGCAGTACCCCTCCAG
GTTTTATCTGCACTACGTGAGATGTAAAT	CATAAAAAACCTTTATTCTGTCATCCACTTCTTTTT
GTTTTATCTGCACTACGTGAGATGTAAAT	ATATTGTACCTCTACAAAAAGTGTTATCCTGAAAAT
GTTTTATCTGCACTACGTGAGATGTAAAG	TTAAGGGCCCGAATAACAATGAAGCCAAGAAAAATATC
GTTTTATCTGTATTACGTGAAATAGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017269.1\|WP_069978089.1\|3340576_3341557_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP017269.1\|WP_069978106.1\|3353206_3354271_+\|P1-family-peptidase	unknown	unknown	gnl\|CDD\|239071
NZ_CP017269.1\|WP_069978094.1\|3345899_3346508_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_156782412.1\|3334388_3336155_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NZ_CP017269.1\|WP_069978100.1\|3349396_3351274_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|225116
NZ_CP017269.1\|WP_069978104.1\|3352096_3353131_+\|HD-GYP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP017269.1\|WP_069978091.1\|3341558_3341822_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP017269.1\|WP_069978111.1\|3355849_3356605_+\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350237
NZ_CP017269.1\|WP_069978074.1\|3333620_3334349_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP017269.1\|WP_069978087.1\|3340055_3340580_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP017269.1\|WP_069978098.1\|3348593_3349202_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069978078.1\|3336156_3337068_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_CP017269.1\|WP_069978102.1\|3351467_3351887_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
NZ_CP017269.1\|WP_069978072.1\|3332598_3333555_+\|transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP017269.1\|WP_069978096.1\|3346796_3347855_-\|2,3-butanediol-dehydrogenase	unknown	unknown	gnl\|CDD\|176195
NZ_CP017269.1\|WP_069978083.1\|3337071_3337749_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
NZ_CP017269.1\|WP_069978109.1\|3354412_3355660_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|226925
NZ_CP017269.1\|WP_069978085.1\|3337778_3340025_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP017269.1\|WP_069978066.1\|3331902_3332367_+\|QueT-transporter-family-protein	unknown	unknown	gnl\|CDD\|377623
NZ_CP017269.1\|WP_069978113.1\|3356656_3357484_-\|phosphoenolpyruvate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|378168

Protein	Function_ID	Function_description	E-value
NZ_CP017269.1\|WP_069978089.1\|3340576_3341557_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	1.40487e-162
NZ_CP017269.1\|WP_069978106.1\|3353206_3354271_+\|P1-family-peptidase	gnl\|CDD\|239071	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates. DmpA is synthesized as a single polypeptide precursor, which is autocatalytically cleaved to the active heterodimeric form. The cleavage results in two polypeptide chains, with one chain containing an N-terminal nucleophile. This group represents one of the rare aminopeptidases that are not metalloenzymes. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucleophilic attack of the side chain of an N-terminal serine, threonine, or cysteine.	0
NZ_CP017269.1\|WP_069978102.1\|3351467_3351887_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	1.51763e-35
NZ_CP017269.1\|WP_156782412.1\|3334388_3336155_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	6.53538e-23
NZ_CP017269.1\|WP_069978100.1\|3349396_3351274_+\|diguanylate-cyclase	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	4.58411e-54
NZ_CP017269.1\|WP_069978104.1\|3352096_3353131_+\|HD-GYP-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	4.79685e-65
NZ_CP017269.1\|WP_069978091.1\|3341558_3341822_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.01168e-29
NZ_CP017269.1\|WP_069978111.1\|3355849_3356605_+\|NYN-domain-containing-protein	gnl\|CDD\|350237	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains. This N-terminal LabA-like PIN domain is found in a well conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. LabA from Synechococcus elongatus PCC 7942, (which does not contain this C-terminal domain), has been shown to play a role in cyanobacterial circadian timing. The LabA-like C-terminal domains characteristic of this subfamily may be related to the LOTUS domain family (which also co-occurs with LabA-like N-terminal domains). The function of the N-terminal domain is unknown. The LabA-like PIN domain family also includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Other members are the LabA-like PIN domains of human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.02314e-65
NZ_CP017269.1\|WP_069978074.1\|3333620_3334349_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	9.40479e-23
NZ_CP017269.1\|WP_069978087.1\|3340055_3340580_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	9.95614e-59
NZ_CP017269.1\|WP_069978078.1\|3336156_3337068_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	5.1941e-55
NZ_CP017269.1\|WP_069978072.1\|3332598_3333555_+\|transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	5.83424e-39
NZ_CP017269.1\|WP_069978096.1\|3346796_3347855_-\|2,3-butanediol-dehydrogenase	gnl\|CDD\|176195	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.	0
NZ_CP017269.1\|WP_069978083.1\|3337071_3337749_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.61101e-37
NZ_CP017269.1\|WP_069978109.1\|3354412_3355660_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|226925	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only].	4.19138e-29
NZ_CP017269.1\|WP_069978085.1\|3337778_3340025_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	4.61272e-60
NZ_CP017269.1\|WP_069978066.1\|3331902_3332367_+\|QueT-transporter-family-protein	gnl\|CDD\|377623	pfam06177, QueT, QueT transporter. This family includes the queT gene encoding a hypothetical integral membrane protein with 5 predicted transmembrane regions. The queT genes in Firmicutes are often preceded by the PreQ1 (7-aminomethyl-7-deazaguanine) riboswitches of two distinct classes, suggesting involvement of the QueT transporters in uptake of a queuosine biosynthetic intermediate.	7.05381e-48
NZ_CP017269.1\|WP_069978113.1\|3356656_3357484_-\|phosphoenolpyruvate-hydrolase-family-protein	gnl\|CDD\|378168	pfam09370, PEP_hydrolase, Phosphoenolpyruvate hydrolase-like. This domain has a TIM barrel fold related to IGPS and to phosphoenolpyruvate mutase/aldolase/carboxylase.	0

>NZ_CP017269.1|WP_069978091.1|3341558_3341822_+|CRISPR-associated-endonuclease-Cas2
MFVIVTYDVGEKRVNKVRKHLKKYLIWVQNSVFEGEITEGKLEKCLMELSRKINKHEDSIYVYKIKIPSQITKDIIGEEKNVDDMFL
>NZ_CP017269.1|WP_069978089.1|3340576_3341557_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MSRDYYIFSNGRIMRKDNTIYFEDAIGARRALPVEDVDKIHFFGETDLNSKLLNYVSKYGILLNFYNYHGFYTGTFYSRKKNVSGFLLVKQAEHYSNLSKRLYLAKSFIDSAVFHILRNLRNYAGTEEFIEKIETERNNIYKSSQIDELMGTEGRIRKIYYEAFNKVLKNGFCLEKRQKRPPTDPVNALISFGNSMIYTTVLGEIYKTQLEPTISYLHQPSTKRFSLSLDLAEIFKPLIIDPIIFRLANNRMITEDDFDEEEEVCFLNEQGKKKFLKEFEAKLETTITHRKLGRKVSYKTFIRLECYKLIKHLVDDEIYKPLKAWW
>NZ_CP017269.1|WP_069978087.1|3340055_3340580_+|CRISPR-associated-protein-Cas4
MDYDFEKLKTQGTKVNYYYICKRKLWFFDKGISMEDNSDRVLQGKILHESSYPRIETREILIDDMLKIDIMDNDFIREIKISSKMTNADYMQTVYYLYYLKQLGIKKKGMINYVKERKREEIELTEELEKEIEKTLIDINDILSRDKPPRLEKLPYCKKCAYYGFCYIKEDDDK
>NZ_CP017269.1|WP_069978085.1|3337778_3340025_+|CRISPR-associated-helicase/endonuclease-Cas3
MMIYAKSKPIESLKEHTDKLIRNYYLLQECYGKKIQNPKMWNMLLTAVRYHDAGKIYCQFQNKIIENIRKEYKAEIQGVEQIVDYDLPHNYLSPAFLPHFKDLGLSKKEFQVLVQAIAYHHERNQEPDTLKIRDIIEQDLQYKIENVRNELLVEVPDKLMSQYTAYISSLKRIKSDDENYFLYVLIKGLLHRIDHSASASLQDYFEEIERDVNKNVAQYTSDYLTRKNYPLRDVQIFSQNNKEKNLIVVASTGMGKTESALLWIDNDKAFFTLPLRVSINALYDRVTKKEDIEKKEDGMGYEYTGLLHSTSMDHLDEAGYENWEEIYDHSRILSSKLTFTTIDQIFKFPFKYRGYEKLYATMAYSKVVIDEIQAYSPDIAAVLLKGLEMIHQIGGKFMIMTATLPKLYIQTLQERGVLTQDDFVMGEYLSDRIRHKIEVKDKAIMSDIDEIIKRGKEKKVLVIVNTVDRAIELYGELSRTGEADVYLLHSLFIQKHRSYLERQIKDFANMSDTKGIWITTQIVEASLDVDFDYLFTELSALDSLFQRLGRCYRKRKFDLSEPNAYIYTEEVKGIGTIYDKDIWNMGKAAITEYNFKELSERDKVNMVDHLYSEENLKETRFLKTFKNALSFLDTNNDYELSSNEAQRVLRDIESINTIPREIYESIDDLLQKYKAEADKNERKRLRREISKYTVNVPLYKVKKNKGAVSPINIAGLENFVILEREYDFPEDIMKGKGVIVDEALSNMF
>NZ_CP017269.1|WP_069978083.1|3337071_3337749_+|type-I-B-CRISPR-associated-protein-Cas5
MKVLKLKLFQETACYKKPFAFKVGETYPLPPYSTVKGMLHKILKVEEGSPPVPMRISIQGNYESKFVNYQSMYFFKPNETTKMPLNIHLLYNVQLIIHVDAVEEVLNRIVEGLKNLEEHLSLGRKEDLVRIDEVKYVEVKSYDPDLEGESFIIQNPIYIPVDSLPSDVDGINYRLNWKYNVVNGLRQWDKIDVKYVEEGTEITDEVQVDNDGEPGDLIYFNTTLI
>NZ_CP017269.1|WP_069978078.1|3336156_3337068_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAKGLSMTVIFQAGSLNYGEGIGNISELKKLRRGNGNVYTYASRQCLRYDIARLGHELFSWNLQVVDKSKGTMQFKDEYTIKDSPEMDLFGYMKTKAKGDNEKGGADTRSAAARISHAISVEPYKSDMDFMTSKGLADRIHEQCDPVNVEQHQSYYTYTITIDLDKVGVDGKVILDNSEKQKRVKELLTIVKLLNRNIRGRQETLAPLFVIGGIYDIANPFFQGRIDLETKGDKYSIKIKPIESALETTLFDKSIKEDTIIGMVDDIFANKAEFKKILPNQVLSVEKYFKALEEKLDEIYHQR
>NZ_CP017269.1|WP_156782412.1|3334388_3336155_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MGLIGFIRILKEAGKIDDNDIKKMKNNYIEFNSELLEDFHKNYFDYFLKRYDISVRECEKIDRYLLIAQKEDKFKNATDWIKGVVDNNRKKIKGKLENKVFEQQFDEIYKNLSKIKKADQIEELKDSVSQFKKLMTVKDVNNKLSINFVRSIFSKQYFGQASFLQKPCAAKSVEEQSEIMFRDYIKPVIGLSELMDQSKDIDALKMNLENELKDSSLSKNYEKMLKTISGLAKTRDSLEAVKKCFYEDMLYCSVWENFRATNDFTEGVFAPLAVSNNNAKNYMWDFCTFYPISDIAKLILLCTPAGTVDMQDEYFGFVNLDTDVYELFRQNENLRLKKEEDNVFESLIYDIVSEAREKSKWMLQNILFIEFKMDIDSKNCKLNYFNIPKNVASYFKKHAQNDLGEIKDKTFKKDLVALMLDNKTIKTITYQYNEKSKGKEQIANNIERLIEVKLRSIISSEKYSAYDALLATIAKHKFNRTKEGCEKVDSKKIWVIYKSGQELNTYFKRNQSENKIQGIAYRLLNASKAGNKKEFLDSLLRIYMTAGKEVPSIFLNVMHEQDLEFETVAHAFVSGLISSENHGVKEDK
>NZ_CP017269.1|WP_069978074.1|3333620_3334349_+|CRISPR-associated-endoribonuclease-Cas6
MRLKCEYKASKIPITYQMMFVSLIKEALKISDSDYFQKLYKYGDAANKQSKNFTFAVYMKDYEIADEIFSIKDKVVLNISSPDLEFMIKVYNGLLKLNQFKYKDYLLNKIRIDLVKEKEITSSEVMLKTLSPICIKTKNHRFMKPEDETYVDELNYIADIVLRNYRGQGLQEKLDFIPLQMKKTVVKEEIRDYKANTGDKHLQIHAYAGTFKLKGNVDDLKDLYALGISFKRNQGFGMVEVI
>NZ_CP017269.1|WP_069978072.1|3332598_3333555_+|transcriptional-regulator
MSSIGNALKLYLLLQSKGKMKIRDIAKELEVDERTVRRYRDDLEQAMIYIDSQAGKHGGYYLHNDNYLLGLNLTCEEYLTFLMIKEELEKSNHVVLKDYDSALQKIQQVYISGKNEKDRINIFNFIAKGTKANININEERKKLIDIHAAALTKNKIQIQYTSLSSGLTERIVRPYATIQYKGDMYFTGYCERKQAIADFKLCRIHEYTVLNEKFLADKSFDLDEYMKNCIGIFKDDEIHIKLKVYHPMSQIVKEKIWVENQIITENEEDHSIIYEATMKGVEEIKSWILSMGSKVKVISPQFLADKIKNEIKNMHKIY
>NZ_CP017269.1|WP_069978066.1|3331902_3332367_+|QueT-transporter-family-protein
MKKTVFLVQAALIGAIYAVITIAFAPISYGEIQVRISEALTILPFFTPAAIPGLFVGCIVANIYGGGGPVDIVFGSLATLLAAFLSYKVPKKWMVPIPPIVVNGIVVGFILNYLYQVPLLAAMGWVTLGQTIACYGLGYPLIGLLERYRDKIFR
>NZ_CP017269.1|WP_069978094.1|3345899_3346508_+|hypothetical-protein
MNQNFFDMEVQGLLEQLDETDKKPMEMYMRMIGNPNKVKEFCQIFFRSVEENGSAFTICMKIIEKTRRKEFFPVLMEAVQKAVNPIQVQSIFKSCNALPDDMAIVKSFMKPFVEAMQNNMDTEVCYHGVCLMYRIVSKFPEIEEDLKSLQIYVNHERIQNISRRFDILDKWQTANHRGKNTPGYFMNENDFLEFALKFIRIK
>NZ_CP017269.1|WP_069978096.1|3346796_3347855_-|2,3-butanediol-dehydrogenase
MKAAVWYGKKDVRIMDVPEPSAPGEGKVKIKVHWCGICGSDLHEYLVGPIFIPTTEPHPLTGDVAPVILGHEFSGEIVEIGPGVTNFKVGDRVAPDACQVCHKCYACKIGKYNVCDQLAFTGLMTNGAFAEYVVVPEYTLYKIPDNMSYETAALLEPLAVGVHAVRQAPIALGESVVIFGAGTIGLATLQAVRAAGVSKIYVVEVAKARKDFAKQLGATEVFDPTKMDIKEKIKEVTKGVGADVVFECIGSHKVTPIAVEIARAGGKIVIVGVYEKETSLNFNNVVFKDKHIIGSLAYAGDFAIAIDLINDGRINVEPLITGKIRIDDLIEKGFDELVNRKEENIKIIVTPW
>NZ_CP017269.1|WP_069978098.1|3348593_3349202_+|hypothetical-protein
MNQNFFDMEVQGLLEQLDETDKKPMEMYMRMIGNPNKVKEFCQIFFRSVEENGSQFTICMKTIEKTRRKEFFPVLMEAVQEAVKPIQVQSIFKSCNALPDDMAIVKSFMKPIVEAMQNNMDTEVFYHGVCLMYRIVSKFPEIEEDLKSMQIYVSHEEIQNISRKFDILDKWETANHRGKNKPGYFMNENDFLEFALKFIKIR
>NZ_CP017269.1|WP_069978100.1|3349396_3351274_+|diguanylate-cyclase
MTAQLKSHSQDTYRALIENMLDGFAYHKIVFDDEGKPIDYIFLDVNDAFEQLTGLKKEEILGKRMTSVFENNLEEDSDWIDLYGQVAITGESIRFEKYFHPLKRWYSVSAYSNETGYFSTIFHDITNNKENEEKLSRERDVITKLMETSPAGITVVDRKGQIIFANARAEKIFGLTRSEITTRKYNEAKWRNMDINGRPLADEELIFRKVLETGEAIDDYHQMIERPDGTRVFLSINGAPLLNEEGIISGIVFAINDITQTMQAEEEIRYLSFHDKLTGLYNRAYFEEELARLDTGRQLPLSLILGDANGLKLVNDAFGHEAGDNLLKRVAEIFKEVCRQEDIIARVGGDEFAVILPNVGTDELADIIARMKDRCKEETADPIKVSIALGAATKEYESQNIQALFKLAEDRMYQNKLFESKSTRSSILASLKQSLEERTHETEEHGQRMKLLALKLGRTIGLNENQLYKLDLLAQLHDIGKIAIPDYILEKNNELTEDEWKIMRTHSEIGYRIAGASQELTVIADSILYHHEHWDGSGYPQGIQGEEIPLLARIIAVIDAYDCMTHDRPFARAKSKGEALVELRSCAGKHFDPNIVEAFIQMLAHKKQSNAQREVAVSVESEQKI
>NZ_CP017269.1|WP_069978102.1|3351467_3351887_+|Hsp20/alpha-crystallin-family-protein
MFGGLVPFSKRTGEMENIFERMFQEDFGLPAISTGMRVDIKEDEKGYVLEAEIPGVDKEQIHIDYRNDYLIISVENKVEVNEERENYIWRERKMAKTSRSFYVENIHSEAIEARYENGILKILLPKDEHKKTSKKIEIQ
>NZ_CP017269.1|WP_069978104.1|3352096_3353131_+|HD-GYP-domain-containing-protein
MVRSLEEMELYTKKIEVNKLTPGDILAYDLYLDHGAMIIPAGTKLTVNHIVRLKNMEEKIVSIDLTKVYIKSIQDSKVLMKKAMDGKPITKKEVVKMLQPLLKETRREKNIVRLLLQLQSQDDYTFQHTVNIGIVAGVIAKWMGYTDEEELSKITIAGTLHDIGKSKIPMQILKKPGPLTPVEFEVIKKHPRLGYDILNKMPSYEDEIKLAVRQHHEREDGRGYPQGLVGDDIHPYAKIIAVADVYHAMTSKRVYRGRISPFLVLDHLHSNMDRLDTEIILVFVKNMLNCLIGSKVGLSDGRKGHVTFVDPKAIGYPVIRLEGSHKIIDLYEQKDLTVEEILIE
>NZ_CP017269.1|WP_069978106.1|3353206_3354271_+|P1-family-peptidase
MKKQKRIRDYGICIGSMPTGKKNLITDVAGVKVGHTTISKGDIKTGVTAVLPHDGNLFQEKVLSAIHVANGFGKTMGSIQIEELGNIETPILMTNTLSIGTVSDALISYMLEGNGDIGLTTGTVNPVVCECNDGYLNDIRGRHVTETDVWHAIRNASEDFEEGGVGAGTGMSCYGLKGGIGSASRIVNLSNEDYTVGALVLTNMGRTEDFLLSGEPLGRWIKERDKEIVQEEDRGSIIMLLATDIPLTERQLKRVAKRAVVGLARTGSYIGHGSGDIVITFTTANKVPHERHEGTYAIRMIHEDIIDEVFQASAEAVEEAILNSMIAAETAVGRNGHIRKSLKLYQDLFERKKR
>NZ_CP017269.1|WP_069978109.1|3354412_3355660_+|GNAT-family-N-acetyltransferase
MNSIRKLTKQDSETFSRLIVNAYPGFGHTQTDRENFQSRMDSIVDTDDGGGFYGFFLDETIVGGMRLFDFQMNLFSQKINVGGIGAVCVDLLHKKERIAKELLTYFLEHYRDAGSSMVMLYPFNANFYRRMGFGYGTKMNQYRVKPESFPKGTSKEHIVYLNEKDQQAYIECYQRYMNKTNGLLAKKSFEIRNTFDGDYRIVGYKEDGKLLGYVVFTFEKEKESYRFIYNMIVKEFIYETKEALAELCTFLHTQADQVHRIHINLQEESFHYLLSDPTNGLNDTFQTFFLETDASGIGVMYRVINVEGIFKELHAHNFNDETCRLKLWIEDDFFPKNNGSWIIHFINGKAVRVSEEDYEAEVSMKICDFSSMLMGAVNFRTLYHFGLAEISDEKYVGQVNRIFMTDHKPVCMTMF
>NZ_CP017269.1|WP_069978111.1|3355849_3356605_+|NYN-domain-containing-protein
MIENYNDSKENRMAVLIDGENAQPSLLGKMLAETGKHGSVTVRRIYGDWTTSNMNGWKDALHNYAIQPIQQFRYTVGKNATDSALIIDAMDILHGKLVDGFCIVSSDSDYTRLATRIREEGIFVMGIGEKKTPKAFVNACDVFIYTENISPREIKPILKEDNQKKKENGKALALVQMLREAFEMVVQEDGWAHLGSMGKALLQLDPGFDPRTYGHKQLSQLIRAYSKHFVLKRIDESGPSAVYVQSKEQGA
>NZ_CP017269.1|WP_069978113.1|3356656_3357484_-|phosphoenolpyruvate-hydrolase-family-protein
MPIKREQILQNLKGQIAQGKALLGAGAGTGISAKSAEAGGVDLIIIYNSGRYRMAGRGSLAGLLPYGDANAIVVEMASEVLPVVKHTPVLAGVCGTDPFRLMNVFLRQLKDIGFSGVQNFPTVGLIDGVFRANLEETGMGYDLEVEMIRKAHELDLLTTPYVFNEEEAEKMAKAGADVLVAHMGLTTKGTIGAKTALTLDGCVERIQAIHDVGKAINPDIMVICHGGPIAEPEDARYILSKTAGVVGFFGASSIERLPTEVGIKHQVMDFKNILL

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Crispr_ID: NZ_CP017269_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017269_5

3857916-3858007

Orphan

Consensus_repeat	Method
CTGTATAACAGCGCTTATGTTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017269_5

>merge|NZ_CP017269|5|3857916-3858007|CRISPRCasFinder
CTGTATAACAGCGCTTATGTTGACGAAGAATGCAGGCTTGATCCCACGGTGTCTTCCCGTGTTGCCCAGCTGTATAACAGCGCTTATATTGA

>NZ_CP017269|5|5|3857916-3858007|CRISPRCasFinder
CTGTATAACAGCGCTTATGTTGA	CGAAGAATGCAGGCTTGATCCCACGGTGTCTTCCCGTGTTGCCCAG
CTGTATAACAGCGCTTATATTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017269.1\|WP_069979003.1\|3869846_3870554_+\|RraA-family-protein	unknown	unknown	gnl\|CDD\|319245
NZ_CP017269.1\|WP_069978976.1\|3848856_3849249_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP017269.1\|WP_069978981.1\|3851756_3853286_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239739
NZ_CP017269.1\|WP_069981505.1\|3867201_3868386_+\|thiolase-family-protein	unknown	unknown	gnl\|CDD\|238383
NZ_CP017269.1\|WP_083273629.1\|3864864_3867183_+\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|224170
NZ_CP017269.1\|WP_069978974.1\|3848266_3848713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017269.1\|WP_069981503.1\|3846502_3848092_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225307
NZ_CP017269.1\|WP_069978979.1\|3849970_3851158_+\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
NZ_CP017269.1\|WP_069978997.1\|3861086_3862340_+\|2-hydroxyacyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|377594
NZ_CP017269.1\|WP_069979000.1\|3863487_3864843_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|188463
NZ_CP017269.1\|WP_069979002.1\|3868829_3869792_+\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
NZ_CP017269.1\|WP_069979004.1\|3870566_3871400_+\|transketolase	unknown	unknown	gnl\|CDD\|238970
NZ_CP017269.1\|WP_083273628.1\|3854629_3854989_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP017269.1\|WP_069978993.1\|3858436_3859210_-\|2-hydroxyglutaryl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|224835
NZ_CP017269.1\|WP_069978989.1\|3856235_3856820_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017269.1\|WP_069978987.1\|3855583_3856249_-\|chloramphenicol-acetyltransferase-CAT	unknown	unknown	gnl\|CDD\|227182
NZ_CP017269.1\|WP_069978995.1\|3859416_3860814_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
NZ_CP017269.1\|WP_069978985.1\|3853724_3854354_+\|chloramphenicol-acetyltransferase	unknown	unknown	gnl\|CDD\|227182
NZ_CP017269.1\|WP_069978999.1\|3862336_3863467_+\|2-hydroxyacyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|377594
NZ_CP017269.1\|WP_069978978.1\|3849465_3849978_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271193

Protein	Function_ID	Function_description	E-value
NZ_CP017269.1\|WP_069979003.1\|3869846_3870554_+\|RraA-family-protein	gnl\|CDD\|319245	cd16841, RraA_family, ribonuclease activity regulator RraA family. RraA protein family is named after the regulator of ribonuclease activity A (RraA), a protein that binds to RNase E and inhibits RNase E endonucleolytic cleavages. Members also include proteins with other functions, like a 4-hydroxy-4-methyl-2-oxoglutarate/4-carboxy-4-hydroxy-2-oxoadipate (HMG/CHA) aldolase from Pseudomonas putida, which catalyzes the last step of the bacterial protocatechuate 4,5-cleavage pathway and the uncharacterized YER010Cp protein from yeast, an organism lacking RNAse E.	1.33128e-22
NZ_CP017269.1\|WP_069978976.1\|3848856_3849249_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.90841e-10
NZ_CP017269.1\|WP_069978981.1\|3851756_3853286_-\|recombinase-family-protein	gnl\|CDD\|239739	cd03770, SR_TndX_transposase, Serine Recombinase (SR) family, TndX-like transposase subfamily, catalytic domain; composed of large serine recombinases similar to Clostridium TndX and TnpX transposases. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. TndX mediates the excision and circularization of the conjugative transposon Tn5397 from Clostridium difficile. TnpX is responsible for the movement of the nonconjugative chloramphenicol resistance elements of the Tn4451/3 family. Mobile genetic elements such as transposons are important vehicles for the transmission of virulence and antibiotic resistance in many microorganisms.	4.8051e-63
NZ_CP017269.1\|WP_069981505.1\|3867201_3868386_+\|thiolase-family-protein	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	0
NZ_CP017269.1\|WP_083273629.1\|3864864_3867183_+\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|224170	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism].	2.85592e-77
NZ_CP017269.1\|WP_069981503.1\|3846502_3848092_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|225307	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only].	0
NZ_CP017269.1\|WP_069978979.1\|3849970_3851158_+\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	4.41597e-85
NZ_CP017269.1\|WP_069978997.1\|3861086_3862340_+\|2-hydroxyacyl-CoA-dehydratase	gnl\|CDD\|377594	pfam06050, HGD-D, 2-hydroxyglutaryl-CoA dehydratase, D-component. Degradation of glutamate via the hydroxyglutarate pathway involves the syn-elimination of water from 2-hydroxyglutaryl-CoA. This anaerobic process is catalyzed by 2-hydroxyglutaryl-CoA dehydratase, an enzyme with two components (A and D) that reversibly associate during reaction cycles. This component contains one non-reducible [4Fe-4S]2+ cluster and a reduced riboflavin 5'-monophosphate.	2.40991e-78
NZ_CP017269.1\|WP_069979000.1\|3863487_3864843_+\|hypothetical-protein	gnl\|CDD\|188463	TIGR03948, hypothetical_protein_FAEPRAM212_02812, butyryl-CoA:acetate CoA-transferase. This enzyme represents one of at least two mechanisms for reclaiming CoA from butyryl-CoA at the end of butyrate biosynthesis (an important process performed by some colonic bacteria), namely transfer of CoA to acetate. An alternate mechanism transfers the butyrate onto inorganic phosphate, after which butyrate kinase transfers the phosphate onto ADP, creating ATP. [Energy metabolism, Fermentation].	8.2523e-143
NZ_CP017269.1\|WP_069979002.1\|3868829_3869792_+\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	2.44356e-26
NZ_CP017269.1\|WP_069979004.1\|3870566_3871400_+\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	1.13405e-145
NZ_CP017269.1\|WP_083273628.1\|3854629_3854989_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.95241e-08
NZ_CP017269.1\|WP_069978993.1\|3858436_3859210_-\|2-hydroxyglutaryl-CoA-dehydratase	gnl\|CDD\|224835	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism].	1.13134e-85
NZ_CP017269.1\|WP_069978989.1\|3856235_3856820_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.0434e-14
NZ_CP017269.1\|WP_069978987.1\|3855583_3856249_-\|chloramphenicol-acetyltransferase-CAT	gnl\|CDD\|227182	COG4845, COG4845, Chloramphenicol O-acetyltransferase [Defense mechanisms].	6.52339e-68
NZ_CP017269.1\|WP_069978995.1\|3859416_3860814_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	1.02559e-135
NZ_CP017269.1\|WP_069978985.1\|3853724_3854354_+\|chloramphenicol-acetyltransferase	gnl\|CDD\|227182	COG4845, COG4845, Chloramphenicol O-acetyltransferase [Defense mechanisms].	7.01037e-70
NZ_CP017269.1\|WP_069978999.1\|3862336_3863467_+\|2-hydroxyacyl-CoA-dehydratase	gnl\|CDD\|377594	pfam06050, HGD-D, 2-hydroxyglutaryl-CoA dehydratase, D-component. Degradation of glutamate via the hydroxyglutarate pathway involves the syn-elimination of water from 2-hydroxyglutaryl-CoA. This anaerobic process is catalyzed by 2-hydroxyglutaryl-CoA dehydratase, an enzyme with two components (A and D) that reversibly associate during reaction cycles. This component contains one non-reducible [4Fe-4S]2+ cluster and a reduced riboflavin 5'-monophosphate.	1.79884e-96
NZ_CP017269.1\|WP_069978978.1\|3849465_3849978_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271193	cd01193, INT_IntI_C, Integron integrase and similar protiens, C-terminal catalytic domain. Integron integrases mediate site-specific DNA recombination between a proximal primary site (attI) and a secondary target site (attC) found within mobile gene cassettes encoding resistance or virulence factors. Unlike other site specific recombinases, the attC sites lack sequence conservation. Integron integrase exhibits broader DNA specificity by recognizing the non-conserved attC sites. The structure shows that DNA target site recognition are not dependent on canonical DNA but on the position of two flipped-out bases that interact in cis and in trans with the integrase. Integron-integrases are present in many natural occurring mobile elements, including transposons and conjugative plasmids. Vibrio, Shewanella, Xanthomonas, and Pseudomonas species harbor chromosomal super-integrons. All integron-integrases carry large inserts unlike the TnpF ermF-like proteins also seen in this group.	4.97211e-57

>NZ_CP017269.1|WP_069978989.1|3856235_3856820_-|TetR/AcrR-family-transcriptional-regulator
MPTKGDNTKQLIKDTAKHLFSNKGYASVTMKDICDACNLSRGGLYRHYSSTKEIMLEILTDDKEEMKKLLECSFQKKVPAVQLFDGFLNMIRADIQNGANRFYFVIHEFAFVESEQNEYMENRFNSAVQMLSMLLNYGKRTLEFKEFETNAIATHIAFFRDSIVTSSISLHLSNDLIDQQLKLIKDMVIRNESE
>NZ_CP017269.1|WP_069978987.1|3855583_3856249_-|chloramphenicol-acetyltransferase-CAT
MNPNNFTPIDLQTWPLAQMFYYYTQMAPTTYTVNVSMDVTILRKTLKDKEMKFFPAYLYLVTKAIEKQPELRISKQDDILGHWDFLTPAYPQFHDDDKTTSLLWTEYCNDFMTFYSNYIDDTKRYGDSHGILSAKGIPPASAYIISCIPWFTFNSFSLHNHGIKDYYVPSLEAGAFYENNGKILMPLSITVHHATTDGYSLKVFFEELQQSMDNPEEWLAL
>NZ_CP017269.1|WP_083273628.1|3854629_3854989_-|sigma-70-family-RNA-polymerase-sigma-factor
MLEAMKAADRQESAYKRRTYYHRAHYTLDMGDGIANECVTKPETPEEIYIKEETTQEIEDAIENLTEAQKRRLRQRYFEGMKIQQIADMEGVNHSTICYSLRASLKSLKKQTQIKRFRE
>NZ_CP017269.1|WP_069978985.1|3853724_3854354_+|chloramphenicol-acetyltransferase
MGNTYEIIDESKWKRALHCQIFRNSIEPSYCVTFELDITNFLEKVRAEKISFTLSLIFAVSKCANNIEEFRYRFLDGQIVLYDRINTAFTYLDKNTELFKVVNVDMQDTLASYISVAAQKATNQKDYFTGPLGNDVFQFSPMPWVSYTHISHTNSGKKDNSTPLFDWGKYFDRDGKKILPFSVQVHHSFVDGIHIGKLVDSLQDYLNKI
>NZ_CP017269.1|WP_069978981.1|3851756_3853286_-|recombinase-family-protein
MKRQPDKKIYLYGRLSHEDELQGDSNSIINQRKILTKYAEENGFTPYEFIYDDGFSGADFERPSFTKMIEEVEAGNVATVIVKDMSRFGRDYLKVGFYTEILFSEKDVRLIAVNDNVDIGRGENDFTSMMNLFNEWYVKNTSKKIRAVWQAKGKSGERLAVIPPYGYRKDPDNPKQLVIDEESAANVRRIFRLSVDGYGPAQIASLLNDEHILNPSGYKYEHDIVKKARPCKDPYFWNTTTVHKPEYLGLTINFKTWSKSYKDNRPRLNPPEKQLVFEDTHPAIIDPETWDIVRSMRQHKRRAPRYGKSGLFSGVAYCADCGAKLYFYTRSIKNKWGTRYEGSYSCSEYRKDVQYQGKRKCTCHFIRESQLEQLVLEELRDLLRYIPKHEKQFARVVMDRSAQEYKRETAAKKRTAEKHRCRIAELDTLIERLYVDNVSGKITDERYEKMSGKFETEQEELTPAIVHEFIDRIIVHEPEQARGDRRQKVETIYNNIGAVDRLSLMGLGT
>NZ_CP017269.1|WP_069978979.1|3849970_3851158_+|IS91-family-transposase
MVELQDIFNQYGQGYREKHRLPNHILKAMSAIASCRTHTLGGHVDECDSCGHIRVSYNSCRNRHCPKCQTLTKERWIENRKKDLLPVGYFHVVFTMPEELNFMTLLNQREIYSILFKAVSETLLELGRDAKYLGGEIGFISILHTWGQNLMDHPHIHCIVPGGGLSHDGSRWISARKDFFIPVKVLSRKFRGKFLYYLKRIYSEKKLKLVGNIKILKNVGEFKYFIGKLYKREWVVYCKPPFQSAEHVLEYLGRYTHRVAISNHRIVKLDNGQVTFRWRNYRDGNKKKLMTLTVEEFIRRFLIHILPSRFVKIRHYGILSNRNRKIKITKCKVMMGVVLRKDDNAVVKLSVAELLLKLTGVDITRCPCCEKGKMLTKEKPIPKNCSPPEREIKTA
>NZ_CP017269.1|WP_069978978.1|3849465_3849978_+|tyrosine-type-recombinase/integrase
MPLYSYQHLAILMTIYAAGLTVSEAAKLKVSDIDSKNMQISVRCGKGKKDRYTLLSKTNLDILREYWMRYHPGDYLFMGADGKSPITARTIQRIFEEAKEKAGIKKNASVHTLRHSFATHLLEAGTDICYIQRLLGHTSINTTTIYLHLRRMDLLNIVSPLDSLTGVNNG
>NZ_CP017269.1|WP_069978976.1|3848856_3849249_+|GNAT-family-N-acetyltransferase
MIKYHRDKKVDYNRLIDLFNQVGWRDKTNDRDRLKAMVDNSQIVVTAWDEDVMVGSARCTTDYVFNGQINNVVVDAEYRRKGIEKALINKILEHSNQVTYMLRGDTRNEGFYRRLGFEDGSIALVYKRQG
>NZ_CP017269.1|WP_069978974.1|3848266_3848713_+|hypothetical-protein
MKKFFKIVGIGFISGILLFTLSRHGWRVFGFSMCDSPSSLYAEMVSVENDILRIKGGTTSSASAYVGHIYVVEDRSLYVGVKHNTLLGFINRWGDFYIRIAVDTTHIENVYFKDKNREKLIWNVHEGLIRTAPQATQSIDGAAEDNQE
>NZ_CP017269.1|WP_069981503.1|3846502_3848092_+|NAD(P)/FAD-dependent-oxidoreductase
MIRVNEIKLSIEEDLNNIKEKIIKKLRIQPQELLSYQIYKESIDARKGDEIFFVYTVDVSLKDEGKVLKKHKNLIKTPSYSYKEIPSGKIPMNDRPVVIGTGPAGMFAGLILAQRGYKPILLERGRDVDARSKDVEDFWLRGQFQKESNVQFGEGGAGTFSDGKLTTRIKDVRVRKVLEEFVEAGAPEEILYSYKPHIGTDILKDVVKNIRKEMKKLGGDIRFDSKVTDLLIEGGKIKAVEVNCQEWIRTENVVLAIGHSARDTYEMLYQRGVQLRQKPFSIGVRIEHPQELIDQSQYKKFSGHSRLGAADYRLTYQSTKERAVYTFCMCPGGMVVAANSEEAMVVTNGMSEYSRDRENANSALLVQVNTEDFGGSHPLQGMEFQRIWEREAFKLGGSNYHAPVQRVEDFLEGVPSKRIGMVKPSYLPGVTPTDLRKCLPDFVIEAMKEAIPEMDKKLKGFALADALMTGVETRSSAPVRIERFEETLESLNVKGLYPVGEGGGYAGGIVSAAVDGIKAAEKIIQKYRV
>NZ_CP017269.1|WP_069978993.1|3858436_3859210_-|2-hydroxyglutaryl-CoA-dehydratase
MFFLGIDIGSSATKLVVIDKNKNIVGRSVVQLGTGTSGVENAVSNLYISHDFNPNDITGSVVTGYGRKQFRSADTEISEISCHAKGVSHLCPSVRTIIDIGGQDTKIIRIDEKGKIQDFTMNDKCAAGTGRFISVMSKVLDVDIADMGSIDKEATEIISISNTCAVFAESEVISKLSSGFSIPNIVAGIHQSVARRVAGLAYRNRIEPVLALTGGVAQNMGMIRALEQELNNQLIIPYEPQLTGALGAALFALENNR
>NZ_CP017269.1|WP_069978995.1|3859416_3860814_+|sigma-54-interacting-transcriptional-regulator
MTEKNLLYEVLEQSNEGFLIMDAKGTVITVNKAWIQLCTNVLDFDKNVIGTHVFEFKEYINYFSVAEYIVKNKTSYSKVYAPFEDRVIFSSGKPITDNSGKIIYFVVKVNDISDIFHLRNQVENFSRIKELYIEYSKSQTNADLNPIQADPKMQKIYQKCLAISATDATVLIMGESGSGKEIVANFIHNNSNRSEKPFVSINCGAIPGTLIESELFGYAPGAFTGANKTGKKGIFEAANTGTLLLDEIGDMPLEMQVKLLRVMENKVIRRVGSEKDISVDVRIIAATNCALPQLVKEGKFRRDLYYRLNVIRITVPPLRERPKDIVALSKYFHNLFSRKYHHTAAKKVFPDQLLEQFLLYDWPGNVRELRNIMEQLVLLSENGTLDQNIFLSIINDDMSIQNRIITENVSVKQIARLDDIIEETEKQLFKKAYRMKKTSREIAKLLNVSQTTVIRKLKKYGITTD
>NZ_CP017269.1|WP_069978997.1|3861086_3862340_+|2-hydroxyacyl-CoA-dehydratase
MSERRITSKQLLQKLQLDYYLDLNKARYNGRKVAWASSIVPQEFMEVMNIAVAYPENHSAAIAAKKGALPYIDQAEKMGYSNDICSYARINLAYAAMKTNEIPPLPKPNFVVCTNNICNVLIKWYESLAKHFKVPFFLIDVPFNHENCGVNEETSTFNPIPQDRIDYVKAQFEEFIKFLEDICGKKFDYEKFKEVMTISNRTAKAWSKAMNYASMMPTPLDGFNMFNYMAMMVCLRGKKESAMLYEMIAAEMEENIKAGKSQFPGEQKYRIMWDGIACWPYLKHNYTSMLKNGVVISGSTYPKAWEIVYEVGNMDELASIYAGIGNNRNLADQRDIRAVIQRSCKCDGVIYHMNRSCKVMDFMQPEMRRQISEITNIPFVSFDGDQSDPKNFSEAQFETRVEALVENMKGNKEGLAQ
>NZ_CP017269.1|WP_069978999.1|3862336_3863467_+|2-hydroxyacyl-CoA-dehydratase
MSRVDDLLKQMIYVTENVDKVVSDKKHSGKKVVGVLPIYAPEELVHAAGMFPVGCWGGSTNISMAAKYLPPFACSIMQAVMEYAERGTYKDLDALLVPTPCDTLKAISQNLIYACPDQKIIILTHPQNNKMEAGVIFAKSEFAKVKAQLEAVAGTTISDQVINESIEIYNDHRSALMKFTEIIANNPGVLSAVNRHYVIKSGLYMEKEEHTKLIRELNSILKAEPKMDWPGKKIVLAGILAEPNGLLEIFDEFSLAVVADELAQESRQFRTLVPEGKDPLERLARQWQNREACSVILDSEKKRAKHIAALAKANQADGVIFCQMKFCDPEEFDYPSIKKACEDAQIPLLHLESDQLSDSTGQYRTRIQAFCELLGH
>NZ_CP017269.1|WP_069979000.1|3863487_3864843_+|hypothetical-protein
MNYIKEYQNKLMTADDAARTVKNGDFVMYPHFAIKTPLLDEALAMRKMELEDVKINFVTLTYMPEVIKADPEGEVFIFRDGSFSAATRGFCKMGIPIVAIPSLYHEAGRNYEIEQLKHDVLFLAVTPMDDKGYFNLGPSSSYIVDMIKERGGIGRSMKIFVEVNAKLPRVPGDNHVHISQVDGIIEGEPEDMMAIPKIPPTAVDKKIAEHIMSEMVDGACLQLGIGGMPNYVGSMLADSDFKDLGCHTEMFVDAYMDLYNAGKLTNKRKNIDVGKSVFTFAMGSRKLYEFLSNNLEVECRSVSYTNNPFIIAQNHNVFSICSCIAVDMMGNVSSESVGYKQISATGGQWDYHYASMHSNGGKGFVCMPSTKKDHKGNVTSNIVPSLPVGTQISVACNTTNYVVTEYGAVNIKGLSMWERVESLVSIAHPDFREEILQAAAKAGIWRRSNKR
>NZ_CP017269.1|WP_083273629.1|3864864_3867183_+|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein
MKYNIKKAAVIGAGVMGAGIAAILANAGITVVLLDIVPKEFLGAEGKKRSALAVGAIERLLADKKLPAFATDEMAKYITPGNLEDDLSLISDCDWIIEVVAENLEIKHKLIERLLPHIKADAILSTNTSGIPVASIAKNMPVDLQKRFLGTHFFNPPRYMRLLEIIPTAETETDVIEYMTDFGYHILGKGVVKAHDTPNFIANRIGAVVTPLAFRQMKKYGFGIDKIDVLTGKLIGRAKSATFETADLVGLDVLAHVNNNILGALTDEEEKEYFKLPEEIRAMCENGQLGNKTDAGFYKRVKDENNKKIKLVWDFAKQEYVMPDQIEVPFIEVGKKISRLRDRLCALIYSDEAESKFLWENISEIIYYSAKVKNEVADDYKDIDNAMKWGYNWEVGPFELWDLIGFEKAALRMKADGKKLPEWVEERLVKKENFYERDPDFNSFESVYPVLKKFNHSTLLDLGDGVLGLEFKSPGDSITANIRKELVTAIDQVENKNQYKGLVLLNSGGNFLVGADLKEMITSIMAGQLNDVGDKISEFQQVSLRIKYARKPVIAAVHGMVLGGGCEFALQASRIVAHVDTYMGLVEVGVGLIPAGGGLKELVQRNEKLLKSLSCNDFTPTIQKLLFQVATAQVSKNAYEALQLGYLQPTDIIIAQIDGLTERAKEEVLRLAKDGFRQVLPKQTQVTGNSGMATLRAIIMGMTEGGFITGYDAEIAEKIAKVLTGGDVPNGSQITEQELLRLEKEGFTELIQNAKTHERISGMVKNRRPVRN
>NZ_CP017269.1|WP_069981505.1|3867201_3868386_+|thiolase-family-protein
MKNNAVLVAMGRSAIGKAPKGTLRYTRPEELASQVLQGVLAQLPDLPQGQIDDLILGCAMPEAEQGLNVARMIALKAGLGESTPGQTINRFCASGLQSIAIAANTITSRQNDIVIAGGLESMSALPMGGNMMRPDPGLIKNSPHVYDSMGITAENVAAKYHISRENQDAFSVRSHVRAYEAAGNGKFVEEIIPVYADVIEKTENGRTVTNKIIFDKDEGIRPDSSIEALAKLKPIFKVKGSVTPGNSSQTSDGAAFVVMMSEDNAKAFGYQPIAKLIGYSVVGVPPDLMGIGPIYAIPKVLQRNGLTLKDIDLIELNEAFASQSIACINELGLNIDKVNVNGGAIALGHPLGCTGTVLTIKLLQELRRRGQKRGIVSMCIGGGMGAAGVFELIG
>NZ_CP017269.1|WP_069979002.1|3868829_3869792_+|AEC-family-transporter
MNTFTYILLNSIMPIFIIISLGFVLGKKFEMNIFTLSRIVVYLLVPAFIFENIFTVNFDFSMVKILLFSVVYLVSNYILAKIISNILKYDARLSDAFANSIMFNNIGNIGLPLITLAFSTAPFVVGEKTPYLNEALAALVVVMIFNNVTSNTIGFYIGGRGTVSFKKSIINTLKLPAIHAITLALIIKALHFDITLTPIWSALILLKNGLGAIALIAMGVHLSTIKLDFKDVNVYISSFIRLIIGPLLAMLLIYIFRFDSVVAQTILIAYSVPIGLTTALIAIEYNNNQDYTIQAVVASTLFSTITLPFVIYIAGMIYPA
>NZ_CP017269.1|WP_069979003.1|3869846_3870554_+|RraA-family-protein
MKRLNKEQLNVLKEFDTPTVCNALEGFRIRSNTVGFCHPGMVLRTSDTKPMVGYAVTAKISGWGKPTEEQKEMMFSYFRDVRDVEEPTVAVIQDIDERPIGSFWGEVQATTFKALGAVGTLTQGGIRDLNEVDALGFYFFSTEMMVARAESHLVERNTPVEICGLTIHPGDLIHADHHGATVIPAAVAPRLAEACRRVAKAELFVLEPCLKAIERGEKPTVDQLRQWREQMVRLR
>NZ_CP017269.1|WP_069979004.1|3870566_3871400_+|transketolase
MRRNLNKEQLIEKSRQLRINILKMLSKAGSGHPGGSLSAIDILTVLYNNILRHDPKIPGWEERDRLILSKGHVCPALYAVLADFEYFHEDELKGLRKYGSMLQGHPCMNKTPGVEVSGGSLGQGLSIATGIALGGRLDQKDFRVYCLMGDGEIQEGQIWEAAMAAGHYKLDQLCGIVDYNRLQIDGVVDEVMGINPCKDKWIAFNWNVIEVDGHDVLKVEEAFKQAEAYKGKPTVIIAHTVKGKGVSFMENSPAWHGTAPNHAQLEEALLELESKKG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017269_4	4.24\|3343480\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3343480-3343515	36	AP013434	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-U-MedDCM-OCT-S32-C65	6205-6240	7	0.806
NZ_CP017269_4	4.32\|3344013\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3344013-3344048	36	MN693914	Marine virus AFVG_250M396, complete genome	1462-1497	7	0.806
NZ_CP017269_4	4.13\|3342754\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3342754-3342789	36	NZ_KT020842	Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence	7310-7345	8	0.778
NZ_CP017269_4	4.24\|3343480\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3343480-3343515	36	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	37394-37429	8	0.778
NZ_CP017269_4	4.24\|3343480\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3343480-3343515	36	NC_010933	Bacillus cereus strain G9241 plasmid pBC210, complete sequence	192225-192260	8	0.778
NZ_CP017269_4	4.24\|3343480\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3343480-3343515	36	NZ_CP009940	Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence	204734-204769	8	0.778
NZ_CP017269_4	4.24\|3343480\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3343480-3343515	36	NZ_CP009591	Bacillus cereus G9241 plasmid pBC210, complete sequence	112250-112285	8	0.778
NZ_CP017269_4	4.24\|3343480\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3343480-3343515	36	NZ_CP013332	Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence	16243-16278	8	0.778
NZ_CP017269_4	4.11\|3342624\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3342624-3342659	36	KJ603229	Shigella phage POCJ13, complete genome	3997-4032	10	0.722
NZ_CP017269_4	4.11\|3342624\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3342624-3342659	36	NC_029120	Shigella phage 75/02 Stx, complete genome	3997-4032	10	0.722
NZ_CP017269_4	4.13\|3342754\|36\|NZ_CP017269\|CRT,PILER-CR,CRISPRCasFinder	3342754-3342789	36	NZ_AP017978	Neochlamydia sp. S13 plasmid pS13, complete sequence	100044-100079	10	0.722

1. spacer 4.24|3343480|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to AP013434 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-U-MedDCM-OCT-S32-C65) position: , mismatch: 7, identity: 0.806

---tatagagtcttttctaattcttttatatatcttttc	CRISPR spacer
ggataca---tcttctctaattcttttatatatttttta	Protospacer
   **.*   ****.******************.****

2. spacer 4.32|3344013|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to MN693914 (Marine virus AFVG_250M396, complete genome) position: , mismatch: 7, identity: 0.806

tgtaaaactactagaatatgtcacattttcagccaa	CRISPR spacer
taaagaactactagattatatcacattttcagttaa	Protospacer
*. *.********** ***.************..**

3. spacer 4.13|3342754|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT020842 (Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence) position: , mismatch: 8, identity: 0.778

-ctatatatttcttttttatttacattcttttcattc	CRISPR spacer
cttata-atttcttttttatttaaattattttctaat	Protospacer
 .**** **************** *** *****   .

4. spacer 4.24|3343480|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 8, identity: 0.778

tatagagtcttttctaattcttttatatatcttttc	CRISPR spacer
cttattctttttactaattcttttatataccttttc	Protospacer
. **   *.*** ****************.******

5. spacer 4.24|3343480|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to NC_010933 (Bacillus cereus strain G9241 plasmid pBC210, complete sequence) position: , mismatch: 8, identity: 0.778

tatagagtcttttctaattcttttatatatcttttc	CRISPR spacer
cttattctttttactaatttttttatatatcttttc	Protospacer
. **   *.*** ******.****************

6. spacer 4.24|3343480|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009940 (Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence) position: , mismatch: 8, identity: 0.778

tatagagtcttttctaattcttttatatatcttttc	CRISPR spacer
cttattctttttactaatttttttatatatcttttc	Protospacer
. **   *.*** ******.****************

7. spacer 4.24|3343480|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009591 (Bacillus cereus G9241 plasmid pBC210, complete sequence) position: , mismatch: 8, identity: 0.778

tatagagtcttttctaattcttttatatatcttttc	CRISPR spacer
cttattctttttactaatttttttatatatcttttc	Protospacer
. **   *.*** ******.****************

8. spacer 4.24|3343480|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013332 (Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.778

tatagagtcttttctaattcttttatatatcttttc	CRISPR spacer
taattatttttttctaattcttttagatatttttta	Protospacer
**   * *.**************** ****.****

9. spacer 4.11|3342624|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to KJ603229 (Shigella phage POCJ13, complete genome) position: , mismatch: 10, identity: 0.722

tgcttttgttccaatttggagtgattctgaaaataa	CRISPR spacer
ctgttttgttccactttggattgattctggtcctca	Protospacer
.  ********** ****** ********.   * *

10. spacer 4.11|3342624|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to NC_029120 (Shigella phage 75/02 Stx, complete genome) position: , mismatch: 10, identity: 0.722

tgcttttgttccaatttggagtgattctgaaaataa	CRISPR spacer
ctgttttgttccactttggattgattctggtcctca	Protospacer
.  ********** ****** ********.   * *

11. spacer 4.13|3342754|36|NZ_CP017269|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP017978 (Neochlamydia sp. S13 plasmid pS13, complete sequence) position: , mismatch: 10, identity: 0.722

ctatatatttcttttttatttacattcttttcattc	CRISPR spacer
ccctctatttgttttttatttaaattcttttgggat	Protospacer
*. * ***** *********** ******** .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

193163 : 232876

Erwinia_phage(12.5%)

protease,integrase,transposase

attL 193121:193136|attR 247874:247889

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
193121:193136	attL	NA	NA	NA	NA
WP_069973842.1\|193163_194561_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IDZ7	Erwinia_phage	8.9e-29	25.4
WP_069973843.1\|194576_195110_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_069973844.1\|195212_197288_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	4.3e-96	37.7
WP_069973845.1\|197364_198447_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.7e-32	41.4
WP_083273301.1\|198470_198968_-	ATP-binding protein	NA	NA	NA	NA
WP_169832947.1\|199069_199420_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069973848.1\|201003_201663_-	hypothetical protein	NA	NA	NA	NA
WP_169832948.1\|202502_204986_-	AAA family ATPase	A0A1V0SET7	Hokovirus	1.5e-18	27.6
WP_069973850.1\|205703_205985_+	hypothetical protein	NA	NA	NA	NA
WP_069973851.1\|205979_206849_-	HNH endonuclease	NA	NA	NA	NA
WP_069973852.1\|206896_207817_-	hypothetical protein	NA	NA	NA	NA
WP_069973853.1\|209182_215548_-	hypothetical protein	NA	NA	NA	NA
WP_069973854.1\|215624_215864_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_069973855.1\|216308_217742_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_156782293.1\|218192_218450_+	hypothetical protein	NA	NA	NA	NA
WP_083273302.1\|218430_219174_+\|transposase	transposase	NA	NA	NA	NA
WP_069973857.1\|219220_219967_-	potassium channel family protein	A0A1B0Y2S3	Lactobacillus_phage	4.3e-22	41.1
WP_083273804.1\|220185_220998_-	thermonuclease family protein	A0A2P1JU10	Anoxybacillus_phage	4.2e-23	46.8
WP_069973859.1\|221608_222490_-\|integrase	tyrosine-type recombinase/integrase	S5M9V8	Brevibacillus_phage	1.7e-30	32.4
WP_069973861.1\|223006_225490_-	hypothetical protein	NA	NA	NA	NA
WP_156782294.1\|226118_226454_-	hypothetical protein	NA	NA	NA	NA
WP_069973863.1\|226434_226641_-	hypothetical protein	NA	NA	NA	NA
WP_069973864.1\|226725_227511_-	DNA adenine methylase	Q0SPG6	Clostridium_phage	1.0e-98	66.5
WP_069973865.1\|227580_227829_-	hypothetical protein	NA	NA	NA	NA
WP_069973866.1\|228038_228245_+	hypothetical protein	NA	NA	NA	NA
WP_083273805.1\|228287_229526_+	DNA polymerase IV	NA	NA	NA	NA
WP_069973868.1\|229541_229805_+	hypothetical protein	NA	NA	NA	NA
WP_069973869.1\|229885_230209_+	hypothetical protein	NA	NA	NA	NA
WP_069973871.1\|231132_231435_-	hypothetical protein	NA	NA	NA	NA
WP_083273303.1\|231454_231595_-	hypothetical protein	NA	NA	NA	NA
WP_069973872.1\|231598_232249_-	hypothetical protein	NA	NA	NA	NA
WP_169832949.1\|232552_232876_+\|transposase	transposase	NA	NA	NA	NA
247874:247889	attR	NA	NA	NA	NA

DBSCAN-SWA_2

288089 : 295276

Clostridium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069973922.1\|288089_288797_-	DUF2786 domain-containing protein	A0A172JHR5	Bacillus_phage	4.6e-26	35.4
WP_069973923.1\|289200_289383_-	DUF2175 family protein	NA	NA	NA	NA
WP_069973924.1\|289403_289955_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_156782301.1\|290150_290306_-	hypothetical protein	NA	NA	NA	NA
WP_069981249.1\|290317_290524_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069973925.1\|290715_291090_+	helix-turn-helix domain-containing protein	A0A1L2BY72	Clostridium_phage	9.9e-20	45.6
WP_069973926.1\|291288_291537_-	type II toxin-antitoxin system Phd/YefM family antitoxin	E4ZFM1	Streptococcus_phage	5.2e-09	42.4
WP_069973927.1\|292027_292540_+	ImmA/IrrE family metallo-endopeptidase	A0A0A8WEK1	Clostridium_phage	1.6e-15	34.9
WP_069973928.1\|292560_294237_+	recombinase family protein	A0A1L2BY67	Clostridium_phage	2.8e-77	35.6
WP_069973929.1\|294190_295276_-	YifB family Mg chelatase-like AAA ATPase	A0A0R6PGP8	Moraxella_phage	3.1e-05	23.7

DBSCAN-SWA_3

2080216 : 2091428

Prochlorococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069976026.1\|2080216_2081758_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	9.4e-48	51.8
WP_069976028.1\|2081723_2082392_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.1e-20	34.7
WP_069976030.1\|2082379_2083423_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	4.8e-72	46.4
WP_069976032.1\|2083434_2084850_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.4e-59	34.1
WP_069976035.1\|2084871_2085570_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FUQ7	Synechococcus_phage	4.3e-40	39.6
WP_156782363.1\|2085808_2087146_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.7e-45	30.5
WP_069976037.1\|2087645_2091428_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	7.7e-35	24.4

DBSCAN-SWA_4

2917100 : 2956846

Bacillus_phage(27.27%)

protease,transposase,integrase

attL 2956307:2956322|attR 2962592:2962607

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069977380.1\|2917100_2919017_+\|protease	ATP-dependent protease, Lon family	A0A0R6PGP8	Moraxella_phage	2.2e-22	26.5
WP_069977382.1\|2919130_2920462_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	3.1e-108	48.1
WP_069977384.1\|2920619_2921108_+	ferritin family protein	NA	NA	NA	NA
WP_069977386.1\|2921120_2922323_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_083273553.1\|2922477_2923110_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069977387.1\|2923312_2923522_+	DUF1858 domain-containing protein	NA	NA	NA	NA
WP_069977388.1\|2923620_2924286_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_069977389.1\|2924490_2925777_+	adenylosuccinate synthase	A0A285PX35	Cedratvirus	8.1e-69	35.0
WP_069977390.1\|2926297_2927281_-	ATP-binding protein	L0P359	Streptococcus_phage	5.0e-10	29.1
WP_069977391.1\|2927295_2928345_-	DnaD domain protein	NA	NA	NA	NA
WP_069977392.1\|2928492_2930007_+	M1 family metallopeptidase	NA	NA	NA	NA
WP_069977393.1\|2930215_2931613_+	M23 family metallopeptidase	A0A7K9	Microcystis_virus	2.0e-25	52.6
WP_069977394.1\|2931671_2932976_-	S8 family peptidase	A0A2K9L1G5	Tupanvirus	9.8e-22	34.5
WP_069977396.1\|2933165_2933993_+	hypothetical protein	NA	NA	NA	NA
WP_069977398.1\|2934357_2935047_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.3e-46	45.2
WP_069977400.1\|2935048_2936854_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	4.2e-39	36.0
WP_069977402.1\|2936946_2937438_+	hypothetical protein	NA	NA	NA	NA
WP_069977404.1\|2937461_2938904_+	hypothetical protein	NA	NA	NA	NA
WP_069977406.1\|2938921_2939758_+	two-component system regulatory protein YycI	NA	NA	NA	NA
WP_069977407.1\|2939986_2941240_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_069977409.1\|2941351_2942158_+	MBL fold metallo-hydrolase	A0A2I7SDH3	Paenibacillus_phage	1.5e-33	33.9
WP_069981432.1\|2942345_2943443_+	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	2.9e-19	27.0
WP_069977411.1\|2943505_2943673_+	CxxH/CxxC protein	NA	NA	NA	NA
WP_069977413.1\|2943719_2944199_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_069977415.1\|2944381_2945020_+	chloramphenicol acetyltransferase	NA	NA	NA	NA
WP_069977417.1\|2945167_2945452_+	hypothetical protein	NA	NA	NA	NA
WP_069977419.1\|2945831_2946851_-	hypothetical protein	NA	NA	NA	NA
WP_069977421.1\|2946859_2947057_-	hypothetical protein	NA	NA	NA	NA
WP_069977423.1\|2947481_2947985_+	hypothetical protein	NA	NA	NA	NA
WP_069977425.1\|2948216_2948519_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_069977427.1\|2948502_2948847_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_069977429.1\|2949330_2949885_+	DUF1697 domain-containing protein	NA	NA	NA	NA
WP_156782397.1\|2950173_2950467_+	hypothetical protein	NA	NA	NA	NA
WP_069977433.1\|2950627_2951494_+	DUF89 family protein	NA	NA	NA	NA
WP_069977435.1\|2951581_2952394_+\|transposase	transposase	NA	NA	NA	NA
WP_069977437.1\|2952669_2953536_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_069977439.1\|2953532_2954684_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_069977443.1\|2955379_2955904_+\|transposase	transposase	NA	NA	NA	NA
2956307:2956322	attL	NA	NA	NA	NA
WP_083273559.1\|2956474_2956846_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1P8CWQ3	Bacillus_phage	2.9e-27	47.5
WP_083273559.1\|2956474_2956846_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1P8CWQ3	Bacillus_phage	2.9e-27	47.5
2962592:2962607	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3094786 : 3108021

Clostridium_phage(75.0%)

tail,portal,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069977704.1\|3094786_3096442_+	hypothetical protein	S6B1J7	Thermus_phage	1.8e-33	43.2
WP_069977706.1\|3096455_3097223_+	hypothetical protein	NA	NA	NA	NA
WP_069977716.1\|3097466_3097910_+	hypothetical protein	A0A2I7R4K7	Vibrio_phage	2.2e-13	34.6
WP_069977718.1\|3098034_3098565_+	phage scaffolding protein	NA	NA	NA	NA
WP_069977721.1\|3098597_3099035_+	hypothetical protein	J9QE32	Clostridium_phage	2.6e-11	35.5
WP_069977723.1\|3099037_3100096_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0K2SUH8	Clostridium_phage	3.6e-83	48.2
WP_156782404.1\|3100112_3100559_+\|portal	phage portal protein	A0A0A7RVT1	Clostridium_phage	7.4e-30	45.5
WP_069977725.1\|3100569_3100965_+	hypothetical protein	A0A0A7RTP2	Clostridium_phage	8.9e-19	45.2
WP_069977727.1\|3101219_3102392_+	hypothetical protein	NA	NA	NA	NA
WP_069977729.1\|3102406_3102826_+	hypothetical protein	A0A0A8WJR4	Clostridium_phage	1.3e-20	35.7
WP_069977735.1\|3102827_3103796_+	hypothetical protein	A0A0A7RWY4	Clostridium_phage	6.4e-18	25.9
WP_083273577.1\|3103792_3104230_+	DUF2577 domain-containing protein	NA	NA	NA	NA
WP_069977737.1\|3104229_3104658_+	DUF2634 domain-containing protein	A0A0A7RUS1	Clostridium_phage	2.7e-13	37.2
WP_069977738.1\|3104657_3105731_+\|plate	baseplate J/gp47 family protein	A0A0A7RUN3	Clostridium_phage	1.6e-54	40.3
WP_069977739.1\|3105693_3106278_+	YmfQ family protein	S6BFJ0	Thermus_phage	7.7e-35	46.1
WP_069977742.1\|3106280_3106667_+	hypothetical protein	NA	NA	NA	NA
WP_069977744.1\|3106666_3107488_+	hypothetical protein	NA	NA	NA	NA
WP_069977746.1\|3107766_3108021_+	hemolysin XhlA family protein	A0A0A7RWZ1	Clostridium_phage	2.7e-08	53.1

DBSCAN-SWA_6

4095485 : 4151161

Bacillus_phage(20.0%)

coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156782436.1\|4095485_4095644_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_069979380.1\|4096695_4097886_+	amidohydrolase	NA	NA	NA	NA
WP_069979382.1\|4097954_4099499_+	AbgT family transporter	NA	NA	NA	NA
WP_069979393.1\|4100005_4100530_+	folate family ECF transporter S component	NA	NA	NA	NA
WP_069979395.1\|4100747_4101350_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_069979397.1\|4101815_4102451_+	cobalamin B12-binding domain-containing protein	NA	NA	NA	NA
WP_069979399.1\|4102584_4103736_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
WP_156782437.1\|4103750_4103897_+	hypothetical protein	NA	NA	NA	NA
WP_069979401.1\|4104017_4105178_+	hypothetical protein	NA	NA	NA	NA
WP_069979403.1\|4105614_4106181_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069979405.1\|4106277_4107003_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_069979407.1\|4107856_4108366_+	hypothetical protein	NA	NA	NA	NA
WP_083273645.1\|4108488_4109379_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_069979409.1\|4109686_4111426_+	hypothetical protein	NA	NA	NA	NA
WP_156782438.1\|4111533_4111776_-	hypothetical protein	NA	NA	NA	NA
WP_069979412.1\|4111953_4113342_-	MATE family efflux transporter	NA	NA	NA	NA
WP_069979414.1\|4113347_4113818_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_069979416.1\|4114167_4114626_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069979418.1\|4114663_4115215_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069979420.1\|4115432_4115816_-	helix-turn-helix domain-containing protein	A0A0A8WE28	Clostridium_phage	4.3e-18	46.6
WP_083273646.1\|4115962_4116241_+	helix-turn-helix transcriptional regulator	A0A139ZPK3	Marinitoga_camini_virus	2.3e-05	45.6
WP_069979424.1\|4116326_4117247_+	diguanylate cyclase	G3MA91	Bacillus_virus	2.1e-10	30.9
WP_069979426.1\|4117373_4118264_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_069979428.1\|4118493_4119549_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_069979430.1\|4119605_4120100_+	TRAP transporter small permease subunit	NA	NA	NA	NA
WP_069979432.1\|4120090_4121452_+	TRAP transporter large permease	NA	NA	NA	NA
WP_156782538.1\|4121467_4122781_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_069981523.1\|4122836_4124108_+	aconitase X catalytic domain-containing protein	NA	NA	NA	NA
WP_069979440.1\|4124104_4124524_+	DUF126 domain-containing protein	NA	NA	NA	NA
WP_069979442.1\|4124696_4125446_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_069979444.1\|4125697_4126681_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_069979446.1\|4126720_4127530_-	ABC transporter permease	NA	NA	NA	NA
WP_069979448.1\|4127534_4128512_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-21	32.7
WP_069979450.1\|4128523_4129336_-	ABC transporter permease	NA	NA	NA	NA
WP_156782440.1\|4129946_4130651_+	hypothetical protein	NA	NA	NA	NA
WP_069981524.1\|4131219_4133208_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.2e-06	78.9
WP_069979452.1\|4133801_4135538_+	biosynthetic-type acetolactate synthase large subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	2.4e-60	29.2
WP_069979453.1\|4135620_4135827_+	hypothetical protein	NA	NA	NA	NA
WP_083273651.1\|4136012_4136597_+\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_069979457.1\|4136814_4137060_+	hypothetical protein	NA	NA	NA	NA
WP_083273652.1\|4137285_4137870_+\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_069979461.1\|4138071_4140729_-	ABC transporter permease	NA	NA	NA	NA
WP_069979463.1\|4140742_4141411_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-37	39.2
WP_069979464.1\|4141526_4142444_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_069979465.1\|4142436_4143114_-	response regulator transcription factor	NA	NA	NA	NA
WP_069979466.1\|4143449_4143704_+	hypothetical protein	NA	NA	NA	NA
WP_069979476.1\|4143823_4144852_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_069979477.1\|4144869_4145892_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_069979478.1\|4145893_4147045_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_069979479.1\|4147136_4148150_-	GDP-mannose 4,6-dehydratase	E3T4Y8	Cafeteria_roenbergensis_virus	4.6e-43	32.1
WP_069979480.1\|4148155_4149478_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.9e-74	36.8
WP_069979481.1\|4149602_4150478_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.2e-85	55.4
WP_083273653.1\|4150564_4151161_+\|coat	outer spore coat protein CotE	NA	NA	NA	NA

DBSCAN-SWA_7

4985750 : 5067314

Erysipelothrix_phage(79.63%)

tail,capsid,head,holin,portal,protease,terminase,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069980522.1\|4985750_4986473_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_156782553.1\|4986618_4986807_+\|coat	spore coat associated protein CotJA	NA	NA	NA	NA
WP_069980524.1\|4986831_4987089_+\|coat	spore coat protein CotJB	NA	NA	NA	NA
WP_156782474.1\|4987102_4987216_+	manganese catalase family protein	NA	NA	NA	NA
WP_069980525.1\|4987537_4988236_+	hypothetical protein	NA	NA	NA	NA
WP_069980526.1\|4988309_4988507_+	hypothetical protein	NA	NA	NA	NA
WP_069980527.1\|4988952_4989402_+	hypothetical protein	NA	NA	NA	NA
WP_069980529.1\|4989865_4990264_+	hypothetical protein	NA	NA	NA	NA
WP_069980530.1\|4990324_4990735_+	FosX/FosE/FosI family fosfomycin resistance thiol transferase	NA	NA	NA	NA
WP_069980531.1\|4990932_4992378_-	recombinase family protein	A0A0A7RTP8	Clostridium_phage	2.6e-39	32.5
WP_069980532.1\|4994184_4994565_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	1.5e-26	45.6
WP_069980533.1\|4994542_4994932_-	hypothetical protein	NA	NA	NA	NA
WP_069980534.1\|4995129_4995324_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_069980535.1\|4995748_4995952_+	hypothetical protein	NA	NA	NA	NA
WP_069980536.1\|4995963_4996182_+	hypothetical protein	NA	NA	NA	NA
WP_069980538.1\|4997169_4997418_-	hypothetical protein	NA	NA	NA	NA
WP_069980539.1\|4997701_4997926_+	hypothetical protein	NA	NA	NA	NA
WP_069980540.1\|4998076_4998739_+	hypothetical protein	NA	NA	NA	NA
WP_069980541.1\|4998906_4999434_+	manganese catalase family protein	NA	NA	NA	NA
WP_069980542.1\|4999888_5000314_+	DUF3795 domain-containing protein	NA	NA	NA	NA
WP_069980543.1\|5000485_5000797_-	hypothetical protein	NA	NA	NA	NA
WP_069980544.1\|5001090_5002227_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_069980545.1\|5002469_5004455_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_069980546.1\|5005035_5006403_+	DUF4910 domain-containing protein	NA	NA	NA	NA
WP_069980547.1\|5006850_5007048_+	putative motility protein	NA	NA	NA	NA
WP_069980548.1\|5007558_5008077_+	hypothetical protein	A0A2H4J162	uncultured_Caudovirales_phage	4.2e-08	41.5
WP_156782554.1\|5008182_5008662_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_083273737.1\|5009867_5010293_+	hypothetical protein	NA	NA	NA	NA
WP_069980550.1\|5010441_5011095_+	HAD family phosphatase	NA	NA	NA	NA
WP_069980551.1\|5011216_5012581_+	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA
WP_069980552.1\|5012641_5014018_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	9.9e-57	32.1
WP_069980553.1\|5014424_5016932_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_069980554.1\|5016932_5019386_-	site-specific DNA-methyltransferase	Q1MVP0	Enterobacteria_phage	9.1e-29	27.6
WP_069980555.1\|5019406_5021044_-	DUF2326 domain-containing protein	NA	NA	NA	NA
WP_069980556.1\|5021027_5021261_-	hypothetical protein	NA	NA	NA	NA
WP_069980557.1\|5021244_5022483_-	hypothetical protein	NA	NA	NA	NA
WP_069980558.1\|5022510_5022726_-	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	5.3e-10	48.5
WP_169833029.1\|5023088_5023232_+	hypothetical protein	A0A0A8WJA8	Clostridium_phage	2.8e-07	77.3
WP_069980559.1\|5023529_5024078_+	sigma-70 family RNA polymerase sigma factor	A0A2K5B267	Erysipelothrix_phage	1.3e-63	66.3
WP_069980560.1\|5024142_5024805_+	Rha family transcriptional regulator	A0A2K5B268	Erysipelothrix_phage	9.8e-103	84.1
WP_069980561.1\|5024819_5025041_+	hypothetical protein	A0A2K5B269	Erysipelothrix_phage	2.5e-26	76.7
WP_069980562.1\|5025027_5025459_+	DUF4406 domain-containing protein	A0A2K5B270	Erysipelothrix_phage	9.3e-62	77.8
WP_069980563.1\|5025528_5027877_+	hypothetical protein	A0A2K5B271	Erysipelothrix_phage	0.0e+00	93.6
WP_069980564.1\|5028034_5028319_+	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	8.6e-32	77.8
WP_069980565.1\|5028296_5028776_+	HNH endonuclease	A0A2I7QIM4	Bacillus_phage	2.9e-24	57.7
WP_069980566.1\|5030126_5030351_+	hypothetical protein	A0A2K5B274	Erysipelothrix_phage	1.8e-24	76.7
WP_069980567.1\|5030347_5030773_+	DUF1492 domain-containing protein	A0A2K5B275	Erysipelothrix_phage	1.4e-65	87.2
WP_083273884.1\|5030914_5031274_+	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	2.0e-38	61.2
WP_069980568.1\|5031391_5031931_+\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	1.4e-54	58.5
WP_156782475.1\|5031927_5033097_+	methionine adenosyltransferase	A0A2K5B278	Erysipelothrix_phage	3.1e-152	69.0
WP_069980570.1\|5033086_5034322_+	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	1.0e-174	70.8
WP_069980571.1\|5034314_5036051_+	DNA (cytosine-5-)-methyltransferase	A0A1P8DJM9	Virus_Rctr41k	2.5e-33	26.1
WP_069980572.1\|5036145_5036838_+	virulence protein	A0A2K5B280	Erysipelothrix_phage	2.8e-60	51.7
WP_069980573.1\|5036821_5037052_+	DUF4314 domain-containing protein	A0A2K5B281	Erysipelothrix_phage	2.1e-20	64.0
WP_069980574.1\|5037041_5037221_+	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_069980575.1\|5037225_5037450_+	hypothetical protein	A0A2K5B284	Erysipelothrix_phage	5.7e-23	60.8
WP_069980576.1\|5037558_5039160_+\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	1.6e-268	83.9
WP_069981583.1\|5039178_5040435_+\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	3.1e-198	80.8
WP_069980577.1\|5040431_5041112_+\|protease	Clp protease ClpP	A0A2K5B288	Erysipelothrix_phage	4.5e-79	66.4
WP_069980578.1\|5041124_5042324_+\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	3.7e-169	72.6
WP_069980579.1\|5042339_5042558_+	Head fiber protein	A0A2K5B289	Erysipelothrix_phage	8.1e-14	60.8
WP_069980580.1\|5042577_5042886_+\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	1.2e-42	81.4
WP_069980581.1\|5042889_5043225_+\|head	phage head closure protein	A0A2K5B291	Erysipelothrix_phage	1.3e-31	60.4
WP_069980582.1\|5043217_5043649_+	HK97 gp10 family phage protein	A0A2K5B292	Erysipelothrix_phage	1.6e-45	64.3
WP_069980583.1\|5043645_5043999_+	hypothetical protein	A0A2K5B293	Erysipelothrix_phage	2.5e-28	52.7
WP_069980584.1\|5044002_5044605_+\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	6.6e-82	76.6
WP_069980585.1\|5044616_5045000_+	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	1.5e-42	69.4
WP_069980586.1\|5045213_5047499_+\|tail	phage tail protein	A0A2K5B297	Erysipelothrix_phage	7.2e-12	80.0
WP_069980587.1\|5047512_5048286_+\|tail	phage tail family protein	A0A2I4R672	Erysipelothrix_phage	3.9e-79	57.4
WP_069980588.1\|5048290_5050813_+\|tail	phage tail protein	A0A2K5B298	Erysipelothrix_phage	0.0e+00	61.8
WP_069980589.1\|5050827_5051022_+	hypothetical protein	A0A2K5B299	Erysipelothrix_phage	2.1e-13	52.3
WP_156782555.1\|5051028_5051613_+	hypothetical protein	A0A2K5B2A0	Erysipelothrix_phage	1.4e-52	55.2
WP_069980591.1\|5051609_5054081_+	glycosyl hydrolase	A0A2K5B2A1	Erysipelothrix_phage	0.0e+00	68.7
WP_069980592.1\|5054167_5054575_+\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	3.1e-51	70.4
WP_069980593.1\|5054574_5055519_+	N-acetylmuramoyl-L-alanine amidase	H7BVK7	unidentified_phage	1.9e-46	43.1
WP_069980594.1\|5055649_5055868_+	hypothetical protein	A0A2I4R673	Erysipelothrix_phage	1.6e-30	91.7
WP_069980595.1\|5055842_5056160_+	rRNA biogenesis protein rrp5	A0A2K5B2A7	Erysipelothrix_phage	1.3e-36	79.0
WP_069980596.1\|5056152_5057289_+	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	1.7e-211	95.8
WP_069980597.1\|5057294_5057846_+	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	2.0e-101	99.5
WP_069981584.1\|5057919_5059860_+	DNA polymerase	A0A2K5B2B0	Erysipelothrix_phage	0.0e+00	97.8
WP_003762658.1\|5059915_5060131_+	hypothetical protein	A0A2K5B2B1	Erysipelothrix_phage	4.2e-31	93.0
WP_069980598.1\|5060192_5061755_+	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	3.6e-281	93.5
WP_069980599.1\|5061755_5062172_+	recombinase	A0A2K5B2B3	Erysipelothrix_phage	5.6e-72	99.3
WP_179948113.1\|5062173_5063739_+	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	5.5e-253	87.1
WP_061106158.1\|5064327_5064693_+	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	6.1e-14	40.2
WP_061106156.1\|5064841_5065063_+	cation transporter	NA	NA	NA	NA
WP_061106154.1\|5065234_5065456_+	cation transporter	NA	NA	NA	NA
WP_069980600.1\|5065469_5067314_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.6e-118	40.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017269

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection