CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016875	Legionella pneumophila subsp. pneumophila strain FFI329 plasmid, complete sequence	0 crisprs	RT	0	0	0	0
NZ_CP016874	Legionella pneumophila subsp. pneumophila strain FFI329, complete genome	3 crisprs	csa3,RT,cas3,DEDDh,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,PrimPol,WYL,DinG	0	34	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016874_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016874_1

1938738-1939488

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	PILER-CR

12 spacers

cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1

The CRISPR arrays of NZ_CP016874_1

>merge|NZ_CP016874|1|1938738-1939488|CRISPRCasFinder,CRT,PILER-CR
CTTCTAAGCTGCCTGTGCGGCAGTGAACACTGGGGCGACGAGTTAAAAAATGTATCGAATCTTTCTAAGCTGCCTGTGCGGCAGTGAACTAGATTAACTAAAAAGGGAGGTGTGGTTGTTTTTTCTAAGCTGCCTGTGCGGCAGTGAACTGGTCTGGAGTTGTAGTTAAGAGCAGGCAAGATTTCTAAGCTGCCTGTGCGGCAGTGAACTCATCATTTCTAGCCCAGCCGGATTTCTGTCTTTTCTAAGCTGCCTGTGCGGCAGTGAACAGGCTGTTTTCTGACTTTTGCGCCGTGCATTTTTTCTAAGCTGCCTGTGCGGCAGTGAACATTTTGTCTACATTTTCCCGATGCTTTATATTTTTCTAAGCTGCCTGTGCGGCAGTGAACTGTCGTCTTGCGGTCTATCTCCGTACACTTTGTTTCTAAGCTGCCTGTGCGGCAGTGAACGGGTCACAATCGACTTTAGTAATCATGATGGCTTTCTAAGCTGCCTGTGCGGCAGTGAACTTTGTGGGCAACCCTACCCTGTCGTGTCTGTTGTTTCTAAGCTGCCTGTGCGGCAGTGAACGAATTAATGGAAGACAAAGACGCGCCGCAAGATTTCTAAGCTGCCTGTGCGGCAGTGAACGCACAAAAGACTTAAGAGCTAAGGACGTAGTATTTCTAAGCTGCCTGTGCGGCAGTGAACCAACTTTCAGGCGGTGTTTGTGCCGTGGTACTTTTCTAAGCTGCCTGTGCGGCAGTGAACT

>NZ_CP016874|1|1|1938738-1939488|CRISPRCasFinder
CTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACTGGGGCGACGAGTTAAAAAATGTATCGAATC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAGATTAACTAAAAAGGGAGGTGTGGTTGTTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGGTCTGGAGTTGTAGTTAAGAGCAGGCAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCATCATTTCTAGCCCAGCCGGATTTCTGTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGGCTGTTTTCTGACTTTTGCGCCGTGCATTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATTTTGTCTACATTTTCCCGATGCTTTATATT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGTCGTCTTGCGGTCTATCTCCGTACACTTTG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GGGTCACAATCGACTTTAGTAATCATGATGGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTGTGGGCAACCCTACCCTGTCGTGTCTGTTG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GAATTAATGGAAGACAAAGACGCGCCGCAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCACAAAAGACTTAAGAGCTAAGGACGTAGTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CAACTTTCAGGCGGTGTTTGTGCCGTGGTACT
TTTCTAAGCTGCCTGTGCGGCAGTGAACT

>NZ_CP016874|1|1|1938738-1939487|CRT
CTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACTGGGGCGACGAGTTAAAAAATGTATCGAATC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAGATTAACTAAAAAGGGAGGTGTGGTTGTTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGGTCTGGAGTTGTAGTTAAGAGCAGGCAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCATCATTTCTAGCCCAGCCGGATTTCTGTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGGCTGTTTTCTGACTTTTGCGCCGTGCATTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATTTTGTCTACATTTTCCCGATGCTTTATATT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGTCGTCTTGCGGTCTATCTCCGTACACTTTG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GGGTCACAATCGACTTTAGTAATCATGATGGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTGTGGGCAACCCTACCCTGTCGTGTCTGTTG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GAATTAATGGAAGACAAAGACGCGCCGCAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCACAAAAGACTTAAGAGCTAAGGACGTAGTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CAACTTTCAGGCGGTGTTTGTGCCGTGGTACT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NZ_CP016874|1|1|1938739-1939427|PILER-CR
TTCTAAGCTGCCTGTGCGGCAGTGAACA	CTGGGGCGACGAGTTAAAAAATGTATCGAATCT
TTCTAAGCTGCCTGTGCGGCAGTGAACT	AGATTAACTAAAAAGGGAGGTGTGGTTGTTTT
TTCTAAGCTGCCTGTGCGGCAGTGAACT	GGTCTGGAGTTGTAGTTAAGAGCAGGCAAGAT
TTCTAAGCTGCCTGTGCGGCAGTGAACT	CATCATTTCTAGCCCAGCCGGATTTCTGTCTT
TTCTAAGCTGCCTGTGCGGCAGTGAACA	GGCTGTTTTCTGACTTTTGCGCCGTGCATTTT
TTCTAAGCTGCCTGTGCGGCAGTGAACA	TTTTGTCTACATTTTCCCGATGCTTTATATTT
TTCTAAGCTGCCTGTGCGGCAGTGAACT	GTCGTCTTGCGGTCTATCTCCGTACACTTTGT
TTCTAAGCTGCCTGTGCGGCAGTGAACG	GGTCACAATCGACTTTAGTAATCATGATGGCT
TTCTAAGCTGCCTGTGCGGCAGTGAACT	TTGTGGGCAACCCTACCCTGTCGTGTCTGTTGT
TTCTAAGCTGCCTGTGCGGCAGTGAACG	AATTAATGGAAGACAAAGACGCGCCGCAAGAT
TTCTAAGCTGCCTGTGCGGCAGTGAACG	CACAAAAGACTTAAGAGCTAAGGACGTAGTAT
TTCTAAGCTGCCTGTGCGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016874.1\|WP_011216749.1\|1952648_1952939_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225495
NZ_CP016874.1\|WP_011216763.1\|1933646_1933973_-\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376187
NZ_CP016874.1\|WP_080020799.1\|1934937_1935915_+\|lytic-murein-transglycosylase	unknown	unknown	gnl\|CDD\|274067
NZ_CP016874.1\|WP_011216767.1\|1928847_1930476_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP016874.1\|WP_011216746.1\|1954981_1956469_-\|lpg2912-family-Dot/Icm-T4SS-effector	unknown	unknown	unknown
NZ_CP016874.1\|WP_010948608.1\|1931598_1932300_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP016874.1\|WP_011216756.1\|1943858_1944884_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP016874.1\|WP_011216766.1\|1930472_1931618_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP016874.1\|WP_011216762.1\|1933965_1934385_-\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|378048
NZ_CP016874.1\|WP_011216757.1\|1943294_1943849_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP016874.1\|WP_011216747.1\|1953687_1954584_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365909
NZ_CP016874.1\|WP_011216754.1\|1945837_1947103_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP016874.1\|WP_011216760.1\|1936219_1937266_+\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|223567
NZ_CP016874.1\|WP_070322272.1\|1944899_1945841_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP016874.1\|WP_080020801.1\|1927958_1928804_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
NZ_CP016874.1\|WP_011216753.1\|1947095_1950491_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NZ_CP016874.1\|WP_011216752.1\|1950487_1951456_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP016874.1\|WP_080020800.1\|1932242_1933490_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|182528
NZ_CP016874.1\|WP_080020850.1\|1937342_1937879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016874.1\|WP_011216748.1\|1953228_1953420_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016874.1\|WP_011216749.1\|1952648_1952939_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	1.04018e-22
NZ_CP016874.1\|WP_011216763.1\|1933646_1933973_-\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	3.38351e-16
NZ_CP016874.1\|WP_080020800.1\|1932242_1933490_+\|FtsX-like-permease-family-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	3.04027e-46
NZ_CP016874.1\|WP_011216767.1\|1928847_1930476_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	9.60384e-32
NZ_CP016874.1\|WP_010948608.1\|1931598_1932300_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	3.13975e-112
NZ_CP016874.1\|WP_011216753.1\|1947095_1950491_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP016874.1\|WP_011216766.1\|1930472_1931618_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.75306e-31
NZ_CP016874.1\|WP_011216762.1\|1933965_1934385_-\|nucleotidyltransferase	gnl\|CDD\|378048	pfam08780, NTase_sub_bind, Nucleotidyltransferase substrate binding protein like. Nucleotidyltransferases (EC 2.7.7) comprise a large enzyme family with diverse roles in polynucleotide synthesis and modification. This domain is structurally related to kanamycin nucleotidyltransferase (KNTase) and forms a complex with HI0073, a sequence homolog of the nucleotide-binding domain of this nucleotidyltransferase superfamily.	1.84677e-53
NZ_CP016874.1\|WP_080020799.1\|1934937_1935915_+\|lytic-murein-transglycosylase	gnl\|CDD\|274067	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	1.3847e-138
NZ_CP016874.1\|WP_011216754.1\|1945837_1947103_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	2.15582e-162
NZ_CP016874.1\|WP_011216760.1\|1936219_1937266_+\|pyridine-nucleotide-disulfide-oxidoreductase	gnl\|CDD\|223567	COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only].	9.26274e-05
NZ_CP016874.1\|WP_070322272.1\|1944899_1945841_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	1.2493e-139
NZ_CP016874.1\|WP_080020801.1\|1927958_1928804_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	5.53465e-160
NZ_CP016874.1\|WP_011216747.1\|1953687_1954584_+\|hypothetical-protein	gnl\|CDD\|365909	pfam00153, Mito_carr, Mitochondrial carrier protein.	0.00272222
NZ_CP016874.1\|WP_011216752.1\|1950487_1951456_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP016874.1\|WP_011216757.1\|1943294_1943849_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	9.12405e-87
NZ_CP016874.1\|WP_011216756.1\|1943858_1944884_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0

>NZ_CP016874.1|WP_080020850.1|1937342_1937879_+|hypothetical-protein
MTWLGNAKDKKMIKIFIYLGLLLSSNLLMAKPLSQLDSANLAPCFNIEQAERIGKQINKLLQHEFCEENINPKKFASISHNILPKIMTETFLGVTPPENWQQLSNDIIKNCITNKNLCKKAARKELEECIKPKIPLILIQFGPWFAQNCPQLNKSLIEQWPNKQTILKKIINENKSVE
>NZ_CP016874.1|WP_011216760.1|1936219_1937266_+|pyridine-nucleotide-disulfide-oxidoreductase
MKHKSFQWSVVGAGPAGIAAVGKLLDYGIAPSEILWIDPHFKVGDFGQLWRHVSSNTTVKLFSSFLHAANSFSYKKAPSTFRLNNLDPDNTCLLSDVAEPLQWVTSVLVNQVIAEETVIHSLSLSGGCWTLCSDTQQYRAKNVILATGAVPSSLNCPGVNVVPFEIAIDKQRLASFVDTNETYGVFGSSHSAIMILRSLIELGVKKVINFYRSPCRYAINMGNWILFDNTGLKGDTAAWARKHIDGVLPANLVRYYPSELNIARHLPECDKVIYAVGFERRKNMIIDNYEHVTPNPHVGIIGPGLFGLGIAYPELNVDPFGTVEHQVGLWKFMVYLCKVLPVWFKYPA
>NZ_CP016874.1|WP_080020799.1|1934937_1935915_+|lytic-murein-transglycosylase
MRGRAMKKWGLAIVALMLFNQMTYASQSWNQWVAGVREEALQQGIPPGLFDEAFAGIHEPSRKIKGFLRSQPEHRLTFMKYRNTRADNYRIVIGRKEYKRNKEILEEIAQQYGVNPCFIVSFWGMETSYGSYMGNFPVINALATLAYDSNRKDFFRKELFLALHILKGGHVSLADFKGEWAGASGQPQFLPSSWVKYAVDYDGDGRKDIWKSKPDVFASIANYMKQNGWQAGEPWAIQVKLPAKFDMKLEGKSIVKPVSEWNALGVRTESGEPLPYQNLQASIVQPYGGPTFLAFPNYKMILRYNNSIYYAGAIGYMADKICQGQ
>NZ_CP016874.1|WP_011216762.1|1933965_1934385_-|nucleotidyltransferase
MTNIDVRWQQRLNNYARALQQLSLAVNLAQTRPLSDLEKQGLIQAFEFTHELAWNVMKDYFFFQGNSAITGSRDATRESFNKGLIKEGEIWMEMIKSRNQTSHTYNQSVADEIVKNIINSYHTSFQAFLEKMQGLKEHE
>NZ_CP016874.1|WP_011216763.1|1933646_1933973_-|nucleotidyltransferase-domain-containing-protein
MNEQLNHLYGLPSHAIEALKCVFKEYPQIDNAILYGSRAKGTYHQGSDIDLCLTGNLLGITELLSIENKIDDLLLPWKVDISLKHTIDNPDLLEHIERAGILFYTKES
>NZ_CP016874.1|WP_080020800.1|1932242_1933490_+|FtsX-like-permease-family-protein
MQTPNNLSRWSNYSGVRAMNFLNHCQQALVNLTASKLRSLLAVLGILVGTAAVVALISCGQLATEKALEQFKALGTDLLAVSVYQKVPSKSHSESDSLTIDQWQQIAERIPYVLRIAPYSTAYQTLSFNGKVMQGAVIGADESLADIIHVTLTQGHFVSFLDSFEHFCVIGDSLAQQIKEITLDDPIGKQLRIGQSLYTIIGVAERWKENGFFNEDINQAVIIPLAGMSLVSKDAKINNAVLLLKPDSPIDEVINEIKEIINSQAPKLSVFPRSAKQIIASMENQGRIFTLLLAVIGGISLLVGGIGVMNVMLVSVSERKKEIGIRKAVGAKNREIQALFLVESVMLSLLGGVLGVVLGLIFTRIVAYFSDWTFTIYLLPPIAGFLVSAATGIFFGFYPARRASKLEPMVSLRSE
>NZ_CP016874.1|WP_010948608.1|1931598_1932300_+|ABC-transporter-ATP-binding-protein
MSWFMIDRPLIQLSDLVKTYHLEGISTTVLKAVSLTVNEGDLLAIVGASGSGKSTLMNIIGLLDKPDAGTYTLNNRNVASLSDDEAADLRNQNIGFVFQQFNLLPRFTAMQNVALPLTYRGVNPTLIKEKVEQALDKVGMRQYIRHRPTQLSGGQQQRVAIARALVTDPQVILADEPTGALDSRTGSEVMNLFLALHQEGRTIIMVTHDEHVAAQCKRRITLADGAIIAESGQ
>NZ_CP016874.1|WP_011216766.1|1930472_1931618_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MNNYLKIFSIVSLILMLVSCGSSDKPQTSSLKTYEVKPQPLHKTLHFTGTVQPIRESSLTSPMEAVVETMHFHYGQMVKKGEIVLTLNSNELQKQYNDTLTDYLKAKDSYSIAKAKFVGTEELWNAGLISKNNYLSEKSGLDTARVTLMQATRKLSEMLEKMDDKNTQNISNLSLADFDKVRKILTSNHNLIHLKAPSDGIMLYPPKSGEDKNNRVTVGSTIKSGQVIALIGDLKGISVEIDVPEIDIDKIRPGMEATISGVAFGRHQLKGKLVAVNAQASNTSTGGLPSFTAVVEVNSLTPEQQSWIKVGMSASIELNVESNNQLLIPIAAVKREKGSSVVHVQLAKGKVQKRMITTGAAQADSVVVESGLKSGDVVVYD
>NZ_CP016874.1|WP_011216767.1|1928847_1930476_+|TolC-family-protein
MKFLNKSTALLPVIILSGLISFHASSAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKAAIANPEYMLKNWIELPTSPESKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLRLANNEFELQYALGASGVVQKSTFEGIGSSTNHSFLASPELDLKTKIGTKASVSIDNNVSTNNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRALILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDFKLASQELLQMIGLDPDLHISVPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADERAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYNGNNITESARVTLTIPLNDIGRRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYALEKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRYGG
>NZ_CP016874.1|WP_080020801.1|1927958_1928804_+|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MEQNAVPDYAIGDIQGCYDPLQRLLELIDFNEKDDCLWFVGDLVNRGPDSLAVLRFIYSLPVKPKITLGNHDLHLLGLLFGGQPWKGHDDTLEEVMLADDGEELGHWLRKQSLLCRSSELNIVMCHAGIAPLWDLSKAVGLANELEAVLSGDSYHEFFAQMYGNKPDIWSDDLVGLDRLRVITNYFTRMRYCDAHGRLDLGYKGTLSKAPNHLYPWFEVPCRKEIEMDIVFGHWAALMGRSSHPRIHAIDTGCLWGGQLTALRLQDRQRFSVPGYGVSRFE
>NZ_CP016874.1|WP_011216757.1|1943294_1943849_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLEISILPDSEFTTPVLMNAIYTNLHKALHTLASTSIGVSFPKYSSTLGNILRIHGKKEVLQDLQNLNWIGGMIGYCEASLIKTVPADTKFRTVSRKQPTMSQSKLRRLIKRNTLTEDEIRQYKAKMFSKGLDNPYIELVSVSNGQRHRRYIEFGELFNEPSPGLFDQFGLSNSATVPWFD
>NZ_CP016874.1|WP_011216756.1|1943858_1944884_-|type-I-F-CRISPR-associated-protein-Csy3
MTKKEHIASVLAFEKKLVPSDGYMYGCKWEHKDKATPLRLNEKSVRGTISNRLKPALQRDPAALNNEVEKPNLQTVDTCSLGSEEDTLKLYFTLKVLGGLKHPSACNNAAFKQSYQLAVSNYLETKGMRELAKRYALNIANARFLWRNRFGAENIQVEVRALNEGAEKSWNFNALDFNPRDLETTTNEVDSLADRIADALASDNDFLMLQITCYARIGKAQDVYPSEELVLDKGKGKKSKILYAVDGIAAMHSQKIGNALRTIDTWYPEFSDPVSSAGPIAIEPYGAVTNLGKAFRTPADKQDFYTFFDTWARGGELSRVEDEHYMMAVLVRGGVFGESDK
>NZ_CP016874.1|WP_070322272.1|1944899_1945841_-|type-I-F-CRISPR-associated-protein-Csy2
MSSNLILLPRIRVQNANALSSPFTIGFPAMTAWLGGVHALQRKLNTNNITVIFSAVGVVVHRFDLQIYKGPGDFVHSIVGTGNPLEPKSEKDKPKGNAVRPSFIEEPRCHLEVSLLVEYSGIEAQDEQLMLERIYQLMLGNMKLAGGDILNCKEPEILRDFQKAKRKLMPGYALIERRDLMQAAMEQGQDAMDAMLDYVAVHYSCTKEIVNGQERVIWQRKRKSTGLDDQTGWIVPIATGFHGISELGTAINQRDPDTPHLFAESVVTLGEFKMPYRLESPDDLLWRYHVESENNLYLCIQQKSISETSNDDY
>NZ_CP016874.1|WP_011216754.1|1945837_1947103_-|type-I-F-CRISPR-associated-protein-Csy1
MFDPAITDFFAERKKSWLKKKLKPDMTELEKNNILQECEDIFALENWLPNAAKRAGWMSISTHPCTFSHPSSRKNKNGYVTSIIAKAPRKADGYLRSGNVHVALDALGNAAALDVYKFLSLVTEDGKTIIEHIQQNTEVAKSLLSIKTDSYENLRVGFLEMVSSNEASITSSKIKQVYFPMGNEYHQLSVLSNSGMIFELRERIDALRFSDTVKRGRELRRGNFYSELGYKEIYDVTTIAYGGTKPQNVSVLNNQYGGKAYLLFSAPPMLEQREITFPTKDFFVQSIRYYDCKEILEQLDNIFKIECYGKISLDKIRKGRDRCLSDMLDMILQKMMVLREASKNQFRSQSSSLPDWQKIWLCEQYIEERVKRDDWLETLCVQIALWINSAYKNSIKHPTMLGEAERRYFNDFINQHREALR
>NZ_CP016874.1|WP_011216753.1|1947095_1950491_-|type-I-F-CRISPR-associated-helicase-Cas3
MMVIFVSQCEKKALARTRRVLDAFADRIGDNTWQTVITQEGLLAVKKLLRKTASKNTAVSCHWIRSRSRTELVWVVGNKGKFDREGRVAVNSTSKNQVYRDDLLDWKLLPVIQSLACLAALLHDWGKANARFQQKLAKNFKGIPADRLRHEWVSCLILKALILNTDNPYSDSDWLGTLKDGIINEDAIKTALRMSCEKPLADLPNIAKLIAWLVVSHHKLPVNPDNLFNGSECFSLDGLLKLIDKSWGYENKTVDEISLCLEFPHGLLTRSSKWLSQIKRWSAKVLGMEELISQTINDGSYCVLLHHARLSLMLGDHYFSSLDVNQTSNWKFTTELIANTQKDKSPKQALDQHLVGVYESARDVVAKLPLIENRLEFSFNTAELKRKSPPAYAWQDTAAKKVRDWRLSCNDTRKGFFAVNIASTGCGKTFANAKVMMALSEDGDSLRYVLALGLRTLTLQTGDEYRERIFNKNDGSDLAVLIGSKAIADLHYQSRLDQTYEQEQQGSESIESLLADSDEIVYQGELPEEGLTTILKKHKDRQLLYAPVLVCTIDHMIAATETTRGGRYILPSLRLLSSDLVIDEVDDFTGSDLIAIGRLIHLAGMLGRKVMISSATIPPAMAEGYFNAYREGWLLYCKTRNANPMVGCAWIDEFSTQVEEIGIREHATQEFRKIHDKYIDRRVKHLNKQPAKRKAIVINCEEVMKRSDEPVVKNKKEAWFNRIAQTTLDMHKLNNTIDKKTGLKVSFGVVRIANIQPCIQLTRYLLTYDWPEHSEARIMAYHSRQVLLLRHEQEKHLDKVLKRKEKRGEKPQAFYDETIRRHLDTIAANRPDVKNLLFILVATPVEEVGRDHDFDWAVIEPSSYRSIIQLAGRVMRHREDKIEYPNIAILQYNWRTIKYGDAERKPRFYFPGYEPDPRKRQANKLSNGKNDCLNSHDIFKIVDINLIKARLDSIPRIQEQPENSKTPMALLEHAVIESLLTNYEGKGPETLQGYIQWYWRLTALPQYLNRFRQSTKTTQLYRVANETGKAWFTERDTRGYFSYVNTGEFARQDDAYQISTLPLTAEQSQRLWIQRDYFHLLREQMEISEMSIDKAAIHYGEISLDVYPDSINTEYEYNDQLGLYKKESNHV
>NZ_CP016874.1|WP_011216752.1|1950487_1951456_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MEILTDLKAILHSKRANIYYLEKCRIMQKDGRVLYLTEAKNENQYWNIPIANTTCLLLGTGTSITQAAMRMLAQAGVLVGFCGGGGTPLLMANEVEWLTPQSEYRPTEYMQGWMKFWFDEQKRLYAAKQFQLSRIEYLRVHWKKSRDLAAEGFNSDDLQPELLSSELKIKKAKEVVKLMQNEAELTKQLYRYAANRTQYGKFIREREAIDKANIFLNHGNYLAYGLAATTLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDALILPWAFICAKENSSEQEFRQQCLQAFIDHKALDYMFEQVKAMALNTDWESENSEENLL
>NZ_CP016874.1|WP_011216749.1|1952648_1952939_+|helix-turn-helix-domain-containing-protein
MDKKLFERLYESMTQMNEIIDGERVPSREFVVDAVHIKEIRKKTGLTQEKFCHLIDVNIGTLRNWEQGRREPTGPAKALLRAINKDPEHVLAALAG
>NZ_CP016874.1|WP_011216748.1|1953228_1953420_-|hypothetical-protein
MRNKDEKAKEVATDSRCAESNRLTHLITGAILADNCFFPNGAYSIKPMVSSPQPPQEKTTPSM
>NZ_CP016874.1|WP_011216747.1|1953687_1954584_+|hypothetical-protein
MKDKTIPSPDAKSFNKKEFSENVAKGAIVGATSTTMTFGLFDKPLAIATKASSEVAQHPWRGIKSLFAGALNGSFSTSWNNSLYAQAYRAYLEHPVKGYPVALLNSCLKNVVFFPAKYGSERALYALSGNEQQAKNYSGFLAGLMTVYLTAPISVVKARLMTNVPLNTLSLKRLGSGVNAIAMRDCIQYGIYFNAKERLNEKIGDGVMAGGIAGIVGYVFSNPLSVIGLNQKTAVESVNIPNMAKRIYQANGVKGFYPLVGLAAWGMFARGVAIHQGTKLYESLQEKEAYGRPTRNRE
>NZ_CP016874.1|WP_011216746.1|1954981_1956469_-|lpg2912-family-Dot/Icm-T4SS-effector
MSYSKIDVLERKWSSLEAIVKSYTDPVEYHLPEIKKLMTAEFVVDFSSHAIYLHTEYVHRFTQQLINLRNTSPNDERLVYIHQLWTDLLNCRNQNPLKIKHHKKLDGECTFNFSLKMMEGKPYDFKEVQILDPNNTAEFNKAMGEIKRIDSLAHGANFGDLPFIGDIVLSSMLHYKETICFIAKDKNDEVIGYCWGMMLRDIPAGEKDKVNVFWVMNLAKHPDFYDPNIKVGEVLRQHLANTLSKNPDCHFLGYEHVLNHNFHLAIVDGGVPKKEETISIGQNQYQAKSLVKYEPLKMQYDRKHIIKTNNHQYPYPKVDVIKSNFFTALWYAAPTAFDFILGGMLIYGRAYYQQWTHSMLGQPVTHRIEKPISQEQQICDMNILKRIILSDVWGQQGTTLFFDACIPNTIQKLQQLVKEDQIEFASLQQCVAKSGWALCRSKLTAYFYFAITQSQYPSAAINLLIQNDMTPKKWIELISEERQIFAQQSSERASI

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Crispr_ID: NZ_CP016874_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016874_2

1939854-1943063

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	PILER-CR

53 spacers

cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1

The CRISPR arrays of NZ_CP016874_2

>merge|NZ_CP016874|2|1939854-1943063|CRISPRCasFinder,CRT,PILER-CR
TTTCTAAGCTGCCTGTGCGGCAGTGAACTAATAACTGCGAATAGGGCGCACGAACATCAATTTCTAAGCTGCCTGTGCGGCAGTGAACTTATTAAAAGACGCATACAGCAGGCTTTGTAATTTCTAAGCTGCCTGTGCGGCAGTGAACAAATCTTAAAGGTCGCCGCCAATATAAGCAGCTTTCTAAGCTGCCTGTGCGGCAGTGAACAACTTAGCCCCTAAGCCTCCAATAGCTGCACATTTCTAAGCTGCCTGTGCGGCAGTGAACCCTTGTGGTTATGCCTTCTATGTTGTCGTAATTTTCTAAGCTGCCTGTGCGGCAGTGAACATAATTTACATTTGGATAAAACATAATCAGGATTTCTAAGCTGCCTGTGCGGCAGTGAACAGTGCATAGTATTATTCATGATAATTGCATTATTTCTAAGCTGCCTGTGCGGCAGTGAACGTGTTATTCGGGAAGGTTCAATCCGGTTATTTTTTCTAAGCTGCCTGTGCGGCAGTGAACTAAGAAATGGCACAAGTATTAAAGAATGTAGTTTTCTAAGCTGCCTGTGCGGCAGTGAACGGTGTAAACTTAGTGTAGCAGTTCGACCTTATTTTTCTAAGCTGCCTGTGCGGCAGTGAACTAACACCCGAATATACAGATTAAAGACGCGAATTTCTAAGCTGCCTGTGCGGCAGTGAACTCTGCTCCTAGCACTAACCCAGGCGTTGTGAATTTCTAAGCTGCCTGTGCGGCAGTGAACTTGTACATTATGGCACTTCTCCTTCGCTGCAATTTCTAAGCTGCCTGTGCGGCAGTGAACCCCAAATGACTTTGGTCTAACGTAACATCTATTTTCTAAGCTGCCTGTGCGGCAGTGAACGCTGTCAAAGAAATAGAAAATTTTGACTTGTATTTCTAAGCTGCCTGTGCGGCAGTGAACATTCAAATGATTGCTTTGGTCAAACAGAATATTTTCTAAGCTGCCTGTGCGGCAGTGAACGTCTTTACTTGTCAATCGGGAATGTTGCGACTTTTCTAAGCTGCCTGTGCGGCAGTGAACTTTTTGTTAATACAACGCCATTGGAAGCCAAATTTCTAAGCTGCCTGTGCGGCAGTGAACCAATCCGATAGAGCAGTCGCAGAAGTTCAAGCTTTCTAAGCTGCCTGTGCGGCAGTGAACAAAAATTTATCGCATGACGTTGAAGGCGAAATTTTCTAAGCTGCCTGTGCGGCAGTGAACCATACGACAAGGAAGGAAACGCAAGGATGGACTTTCTAAGCTGCCTGTGCGGCAGTGAACCCTCTGTTTCTTGCTCGCTGGCATCGTGGGAATTTCTAAGCTGCCTGTGCGGCAGTGAACCTAGTAACTCTATTAAGTCCACGCTTTCTTGTTTTCTAAGCTGCCTGTGCGGCAGTGAACGTACTCATAATACCTTTTTGTCATTTCAAAGATTTCTAAGCTGCCTGTGCGGCAGTGAACGTACATAAGATTTAGGGATAGATTTTTCAAATTTTCTAAGCTGCCTGTGCGGCAGTGAACGTGCAATACGCACAAGCAAAGCAACAGCAAGCTTTCTAAGCTGCCTGTGCGGCAGTGAACGATTTCCGTGTTTTCCTGCTCTCCGACTGCCTTTTCTAAGCTGCCTGTGCGGCAGTGAACTACTAAAACAAGATGAAATACGACTGGCTCATTTTCTAAGCTGCCTGTGCGGCAGTGAACTACAGGCTGGAGATATTGTTCCAGTCTTGTCTTTTCTAAGCTGCCTGTGCGGCAGTGAACTGCTGGGTGGCCAGTGCCGTTGCGCTATCAGATTTCTAAGCTGCCTGTGCGGCAGTGAACTCAAAGAACAGTCAAGAAAAAGAAACCAATCATTTCTAAGCTGCCTGTGCGGCAGTGAACCTTTTTGCTCGTGGTTATGTTACTTTCACTATTTTCTAAGCTGCCTGTGCGGCAGTGAACGACGCAAGAACCAACCTTGGCTTGGGCACAATTTTCTAAGCTGCCTGTGCGGCAGTGAACTAAGCTCTTTTTGGCTGTCTCGGTTGGCTTTTTTTCTAAGCTGCCTGTGCGGCAGTGAACCACAAAGAACCACCGGAAGCGCAGTCGGTATATTTCTAAGCTGCCTGTGCGGCAGTGAACTGAAGAGATGGCAAAAAAGACTGTGTTGAGAATTTCTAAGCTGCCTGTGCGGCAGTGAACTTTATCTATCCCTTAATCTCTTGCGCTGTTATTTTCTAAGCTGCCTGTGCGGCAGTGAACTGGTGCCGGTACTCGCAGGAACTGTTAATGGTGTTTCTAAGCTGCCTGTGCGGCAGTGAACCTAGTTCTCCATTTTTAATTTATGAAGCAGATTTTCTAAGCTGCCTGTGCGGCAGTGAACACTTGCGCTTGACGACGATTCGTTTTTTTGCTTTTCTAAGCTGCCTGTGCGGCAGTGAACGATAACAGTACTATAATTAGAGAAGTTAAAGATTTCTAAGCTGCCTGTGCGGCAGTGAACATTTAACTTATAGGCGTCAATTTGATTCAGCATTTCTAAGCTGCCTGTGCGGCAGTGAACTAAGAATTAGAAGAGAGTCTCCAGTGGATACATTTCTAAGCTGCCTGTGCGGCAGTGAACACGGCTACAGTGCGCGAGCTTGTGCTTAGGATTTTCTAAGCTGCCTGTGCGGCAGTGAACGATTGATAATGATTAAGTGTCATATGTGTAATTTTCTAAGCTGCCTGTGCGGCAGTGAACGTATAGTAGAATCATTGTGTAATGTTTTTTCATTTCTAAGCTGCCTGTGCGGCAGTGAACTCTGGATGATACAAAGAACACGCCTTGCGATATTTCTAAGCTGCCTGTGCGGCAGTGAACTTTTAGCTGATGTTAGCTCGGTAATATTAAGTTTTCTAAGCTGCCTGTGCGGCAGTGAACAGACACCCCATCCCATTAAAATGTGTCGGTATTTTCTAAGCTGCCTGTGCGGCAGTGAACAAGTTGATTAACTGCGCATATGATGTGCTGAATTTCTAAGCTGCCTGTGCGGCAGTGAACTCATTCACATTTAACTCCAAATTTTGTTTATTTTTCTAAGCTGCCTGTGCGGCAGTGAACGTAAACGCCATCTATTGATAGTTGATTCATCGTTTCTAAGCTGCCTGTGCGGCAGTGAACTGTTTCAGAAAAGAACTTAAAGTTTTTTAAAATTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NZ_CP016874|2|2|1939854-1943063|CRISPRCasFinder
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAATAACTGCGAATAGGGCGCACGAACATCAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTATTAAAAGACGCATACAGCAGGCTTTGTAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AAATCTTAAAGGTCGCCGCCAATATAAGCAGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AACTTAGCCCCTAAGCCTCCAATAGCTGCACA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCTTGTGGTTATGCCTTCTATGTTGTCGTAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATAATTTACATTTGGATAAAACATAATCAGGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGTGCATAGTATTATTCATGATAATTGCATTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTGTTATTCGGGAAGGTTCAATCCGGTTATTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAGAAATGGCACAAGTATTAAAGAATGTAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GGTGTAAACTTAGTGTAGCAGTTCGACCTTATT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAACACCCGAATATACAGATTAAAGACGCGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCTGCTCCTAGCACTAACCCAGGCGTTGTGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTGTACATTATGGCACTTCTCCTTCGCTGCAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCCAAATGACTTTGGTCTAACGTAACATCTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCTGTCAAAGAAATAGAAAATTTTGACTTGTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATTCAAATGATTGCTTTGGTCAAACAGAATAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTCTTTACTTGTCAATCGGGAATGTTGCGACT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTTTGTTAATACAACGCCATTGGAAGCCAAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CAATCCGATAGAGCAGTCGCAGAAGTTCAAGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AAAAATTTATCGCATGACGTTGAAGGCGAAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CATACGACAAGGAAGGAAACGCAAGGATGGAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCTCTGTTTCTTGCTCGCTGGCATCGTGGGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CTAGTAACTCTATTAAGTCCACGCTTTCTTGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTACTCATAATACCTTTTTGTCATTTCAAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTACATAAGATTTAGGGATAGATTTTTCAAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTGCAATACGCACAAGCAAAGCAACAGCAAGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GATTTCCGTGTTTTCCTGCTCTCCGACTGCCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TACTAAAACAAGATGAAATACGACTGGCTCAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TACAGGCTGGAGATATTGTTCCAGTCTTGTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGCTGGGTGGCCAGTGCCGTTGCGCTATCAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCAAAGAACAGTCAAGAAAAAGAAACCAATCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CTTTTTGCTCGTGGTTATGTTACTTTCACTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GACGCAAGAACCAACCTTGGCTTGGGCACAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAGCTCTTTTTGGCTGTCTCGGTTGGCTTTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CACAAAGAACCACCGGAAGCGCAGTCGGTATA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGAAGAGATGGCAAAAAAGACTGTGTTGAGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTATCTATCCCTTAATCTCTTGCGCTGTTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGGTGCCGGTACTCGCAGGAACTGTTAATGGTG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CTAGTTCTCCATTTTTAATTTATGAAGCAGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACTTGCGCTTGACGACGATTCGTTTTTTTGCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GATAACAGTACTATAATTAGAGAAGTTAAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATTTAACTTATAGGCGTCAATTTGATTCAGCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAGAATTAGAAGAGAGTCTCCAGTGGATACA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACGGCTACAGTGCGCGAGCTTGTGCTTAGGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GATTGATAATGATTAAGTGTCATATGTGTAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTATAGTAGAATCATTGTGTAATGTTTTTTCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCTGGATGATACAAAGAACACGCCTTGCGATA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTTAGCTGATGTTAGCTCGGTAATATTAAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGACACCCCATCCCATTAAAATGTGTCGGTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AAGTTGATTAACTGCGCATATGATGTGCTGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCATTCACATTTAACTCCAAATTTTGTTTATT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTAAACGCCATCTATTGATAGTTGATTCATCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGTTTCAGAAAAGAACTTAAAGTTTTTTAAAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NZ_CP016874|2|2|1939854-1943063|CRT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAATAACTGCGAATAGGGCGCACGAACATCAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTATTAAAAGACGCATACAGCAGGCTTTGTAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AAATCTTAAAGGTCGCCGCCAATATAAGCAGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AACTTAGCCCCTAAGCCTCCAATAGCTGCACA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCTTGTGGTTATGCCTTCTATGTTGTCGTAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATAATTTACATTTGGATAAAACATAATCAGGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGTGCATAGTATTATTCATGATAATTGCATTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTGTTATTCGGGAAGGTTCAATCCGGTTATTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAGAAATGGCACAAGTATTAAAGAATGTAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GGTGTAAACTTAGTGTAGCAGTTCGACCTTATT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAACACCCGAATATACAGATTAAAGACGCGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCTGCTCCTAGCACTAACCCAGGCGTTGTGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTGTACATTATGGCACTTCTCCTTCGCTGCAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCCAAATGACTTTGGTCTAACGTAACATCTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCTGTCAAAGAAATAGAAAATTTTGACTTGTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATTCAAATGATTGCTTTGGTCAAACAGAATAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTCTTTACTTGTCAATCGGGAATGTTGCGACT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTTTGTTAATACAACGCCATTGGAAGCCAAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CAATCCGATAGAGCAGTCGCAGAAGTTCAAGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AAAAATTTATCGCATGACGTTGAAGGCGAAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CATACGACAAGGAAGGAAACGCAAGGATGGAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCTCTGTTTCTTGCTCGCTGGCATCGTGGGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CTAGTAACTCTATTAAGTCCACGCTTTCTTGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTACTCATAATACCTTTTTGTCATTTCAAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTACATAAGATTTAGGGATAGATTTTTCAAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTGCAATACGCACAAGCAAAGCAACAGCAAGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GATTTCCGTGTTTTCCTGCTCTCCGACTGCCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TACTAAAACAAGATGAAATACGACTGGCTCAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TACAGGCTGGAGATATTGTTCCAGTCTTGTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGCTGGGTGGCCAGTGCCGTTGCGCTATCAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCAAAGAACAGTCAAGAAAAAGAAACCAATCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CTTTTTGCTCGTGGTTATGTTACTTTCACTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GACGCAAGAACCAACCTTGGCTTGGGCACAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAGCTCTTTTTGGCTGTCTCGGTTGGCTTTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CACAAAGAACCACCGGAAGCGCAGTCGGTATA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGAAGAGATGGCAAAAAAGACTGTGTTGAGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTATCTATCCCTTAATCTCTTGCGCTGTTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGGTGCCGGTACTCGCAGGAACTGTTAATGGTG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CTAGTTCTCCATTTTTAATTTATGAAGCAGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACTTGCGCTTGACGACGATTCGTTTTTTTGCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GATAACAGTACTATAATTAGAGAAGTTAAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATTTAACTTATAGGCGTCAATTTGATTCAGCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAGAATTAGAAGAGAGTCTCCAGTGGATACA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACGGCTACAGTGCGCGAGCTTGTGCTTAGGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GATTGATAATGATTAAGTGTCATATGTGTAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTATAGTAGAATCATTGTGTAATGTTTTTTCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCTGGATGATACAAAGAACACGCCTTGCGATA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTTAGCTGATGTTAGCTCGGTAATATTAAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGACACCCCATCCCATTAAAATGTGTCGGTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AAGTTGATTAACTGCGCATATGATGTGCTGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCATTCACATTTAACTCCAAATTTTGTTTATT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTAAACGCCATCTATTGATAGTTGATTCATCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGTTTCAGAAAAGAACTTAAAGTTTTTTAAAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NZ_CP016874|2|2|1942256-1943063|PILER-CR
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GATAACAGTACTATAATTAGAGAAGTTAAAGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATTTAACTTATAGGCGTCAATTTGATTCAGCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAGAATTAGAAGAGAGTCTCCAGTGGATACA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACGGCTACAGTGCGCGAGCTTGTGCTTAGGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GATTGATAATGATTAAGTGTCATATGTGTAAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTATAGTAGAATCATTGTGTAATGTTTTTTCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCTGGATGATACAAAGAACACGCCTTGCGATA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTTAGCTGATGTTAGCTCGGTAATATTAAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGACACCCCATCCCATTAAAATGTGTCGGTAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AAGTTGATTAACTGCGCATATGATGTGCTGAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCATTCACATTTAACTCCAAATTTTGTTTATT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTAAACGCCATCTATTGATAGTTGATTCATCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGTTTCAGAAAAGAACTTAAAGTTTTTTAAAA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016874.1\|WP_011216749.1\|1952648_1952939_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225495
NZ_CP016874.1\|WP_011216763.1\|1933646_1933973_-\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376187
NZ_CP016874.1\|WP_080020799.1\|1934937_1935915_+\|lytic-murein-transglycosylase	unknown	unknown	gnl\|CDD\|274067
NZ_CP016874.1\|WP_011216767.1\|1928847_1930476_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP016874.1\|WP_011216746.1\|1954981_1956469_-\|lpg2912-family-Dot/Icm-T4SS-effector	unknown	unknown	unknown
NZ_CP016874.1\|WP_010948608.1\|1931598_1932300_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP016874.1\|WP_011216756.1\|1943858_1944884_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP016874.1\|WP_011216766.1\|1930472_1931618_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP016874.1\|WP_011216762.1\|1933965_1934385_-\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|378048
NZ_CP016874.1\|WP_011216757.1\|1943294_1943849_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP016874.1\|WP_011216747.1\|1953687_1954584_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365909
NZ_CP016874.1\|WP_011216754.1\|1945837_1947103_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP016874.1\|WP_011216760.1\|1936219_1937266_+\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|223567
NZ_CP016874.1\|WP_070322272.1\|1944899_1945841_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP016874.1\|WP_080020801.1\|1927958_1928804_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
NZ_CP016874.1\|WP_011216753.1\|1947095_1950491_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NZ_CP016874.1\|WP_011216752.1\|1950487_1951456_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP016874.1\|WP_080020800.1\|1932242_1933490_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|182528
NZ_CP016874.1\|WP_080020850.1\|1937342_1937879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016874.1\|WP_011216748.1\|1953228_1953420_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016874.1\|WP_011216749.1\|1952648_1952939_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	1.04018e-22
NZ_CP016874.1\|WP_011216763.1\|1933646_1933973_-\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	3.38351e-16
NZ_CP016874.1\|WP_080020800.1\|1932242_1933490_+\|FtsX-like-permease-family-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	3.04027e-46
NZ_CP016874.1\|WP_011216767.1\|1928847_1930476_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	9.60384e-32
NZ_CP016874.1\|WP_010948608.1\|1931598_1932300_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	3.13975e-112
NZ_CP016874.1\|WP_011216753.1\|1947095_1950491_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP016874.1\|WP_011216766.1\|1930472_1931618_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.75306e-31
NZ_CP016874.1\|WP_011216762.1\|1933965_1934385_-\|nucleotidyltransferase	gnl\|CDD\|378048	pfam08780, NTase_sub_bind, Nucleotidyltransferase substrate binding protein like. Nucleotidyltransferases (EC 2.7.7) comprise a large enzyme family with diverse roles in polynucleotide synthesis and modification. This domain is structurally related to kanamycin nucleotidyltransferase (KNTase) and forms a complex with HI0073, a sequence homolog of the nucleotide-binding domain of this nucleotidyltransferase superfamily.	1.84677e-53
NZ_CP016874.1\|WP_080020799.1\|1934937_1935915_+\|lytic-murein-transglycosylase	gnl\|CDD\|274067	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	1.3847e-138
NZ_CP016874.1\|WP_011216754.1\|1945837_1947103_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	2.15582e-162
NZ_CP016874.1\|WP_011216760.1\|1936219_1937266_+\|pyridine-nucleotide-disulfide-oxidoreductase	gnl\|CDD\|223567	COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only].	9.26274e-05
NZ_CP016874.1\|WP_070322272.1\|1944899_1945841_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	1.2493e-139
NZ_CP016874.1\|WP_080020801.1\|1927958_1928804_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	5.53465e-160
NZ_CP016874.1\|WP_011216747.1\|1953687_1954584_+\|hypothetical-protein	gnl\|CDD\|365909	pfam00153, Mito_carr, Mitochondrial carrier protein.	0.00272222
NZ_CP016874.1\|WP_011216752.1\|1950487_1951456_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP016874.1\|WP_011216757.1\|1943294_1943849_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	9.12405e-87
NZ_CP016874.1\|WP_011216756.1\|1943858_1944884_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0

>NZ_CP016874.1|WP_080020850.1|1937342_1937879_+|hypothetical-protein
MTWLGNAKDKKMIKIFIYLGLLLSSNLLMAKPLSQLDSANLAPCFNIEQAERIGKQINKLLQHEFCEENINPKKFASISHNILPKIMTETFLGVTPPENWQQLSNDIIKNCITNKNLCKKAARKELEECIKPKIPLILIQFGPWFAQNCPQLNKSLIEQWPNKQTILKKIINENKSVE
>NZ_CP016874.1|WP_011216760.1|1936219_1937266_+|pyridine-nucleotide-disulfide-oxidoreductase
MKHKSFQWSVVGAGPAGIAAVGKLLDYGIAPSEILWIDPHFKVGDFGQLWRHVSSNTTVKLFSSFLHAANSFSYKKAPSTFRLNNLDPDNTCLLSDVAEPLQWVTSVLVNQVIAEETVIHSLSLSGGCWTLCSDTQQYRAKNVILATGAVPSSLNCPGVNVVPFEIAIDKQRLASFVDTNETYGVFGSSHSAIMILRSLIELGVKKVINFYRSPCRYAINMGNWILFDNTGLKGDTAAWARKHIDGVLPANLVRYYPSELNIARHLPECDKVIYAVGFERRKNMIIDNYEHVTPNPHVGIIGPGLFGLGIAYPELNVDPFGTVEHQVGLWKFMVYLCKVLPVWFKYPA
>NZ_CP016874.1|WP_080020799.1|1934937_1935915_+|lytic-murein-transglycosylase
MRGRAMKKWGLAIVALMLFNQMTYASQSWNQWVAGVREEALQQGIPPGLFDEAFAGIHEPSRKIKGFLRSQPEHRLTFMKYRNTRADNYRIVIGRKEYKRNKEILEEIAQQYGVNPCFIVSFWGMETSYGSYMGNFPVINALATLAYDSNRKDFFRKELFLALHILKGGHVSLADFKGEWAGASGQPQFLPSSWVKYAVDYDGDGRKDIWKSKPDVFASIANYMKQNGWQAGEPWAIQVKLPAKFDMKLEGKSIVKPVSEWNALGVRTESGEPLPYQNLQASIVQPYGGPTFLAFPNYKMILRYNNSIYYAGAIGYMADKICQGQ
>NZ_CP016874.1|WP_011216762.1|1933965_1934385_-|nucleotidyltransferase
MTNIDVRWQQRLNNYARALQQLSLAVNLAQTRPLSDLEKQGLIQAFEFTHELAWNVMKDYFFFQGNSAITGSRDATRESFNKGLIKEGEIWMEMIKSRNQTSHTYNQSVADEIVKNIINSYHTSFQAFLEKMQGLKEHE
>NZ_CP016874.1|WP_011216763.1|1933646_1933973_-|nucleotidyltransferase-domain-containing-protein
MNEQLNHLYGLPSHAIEALKCVFKEYPQIDNAILYGSRAKGTYHQGSDIDLCLTGNLLGITELLSIENKIDDLLLPWKVDISLKHTIDNPDLLEHIERAGILFYTKES
>NZ_CP016874.1|WP_080020800.1|1932242_1933490_+|FtsX-like-permease-family-protein
MQTPNNLSRWSNYSGVRAMNFLNHCQQALVNLTASKLRSLLAVLGILVGTAAVVALISCGQLATEKALEQFKALGTDLLAVSVYQKVPSKSHSESDSLTIDQWQQIAERIPYVLRIAPYSTAYQTLSFNGKVMQGAVIGADESLADIIHVTLTQGHFVSFLDSFEHFCVIGDSLAQQIKEITLDDPIGKQLRIGQSLYTIIGVAERWKENGFFNEDINQAVIIPLAGMSLVSKDAKINNAVLLLKPDSPIDEVINEIKEIINSQAPKLSVFPRSAKQIIASMENQGRIFTLLLAVIGGISLLVGGIGVMNVMLVSVSERKKEIGIRKAVGAKNREIQALFLVESVMLSLLGGVLGVVLGLIFTRIVAYFSDWTFTIYLLPPIAGFLVSAATGIFFGFYPARRASKLEPMVSLRSE
>NZ_CP016874.1|WP_010948608.1|1931598_1932300_+|ABC-transporter-ATP-binding-protein
MSWFMIDRPLIQLSDLVKTYHLEGISTTVLKAVSLTVNEGDLLAIVGASGSGKSTLMNIIGLLDKPDAGTYTLNNRNVASLSDDEAADLRNQNIGFVFQQFNLLPRFTAMQNVALPLTYRGVNPTLIKEKVEQALDKVGMRQYIRHRPTQLSGGQQQRVAIARALVTDPQVILADEPTGALDSRTGSEVMNLFLALHQEGRTIIMVTHDEHVAAQCKRRITLADGAIIAESGQ
>NZ_CP016874.1|WP_011216766.1|1930472_1931618_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MNNYLKIFSIVSLILMLVSCGSSDKPQTSSLKTYEVKPQPLHKTLHFTGTVQPIRESSLTSPMEAVVETMHFHYGQMVKKGEIVLTLNSNELQKQYNDTLTDYLKAKDSYSIAKAKFVGTEELWNAGLISKNNYLSEKSGLDTARVTLMQATRKLSEMLEKMDDKNTQNISNLSLADFDKVRKILTSNHNLIHLKAPSDGIMLYPPKSGEDKNNRVTVGSTIKSGQVIALIGDLKGISVEIDVPEIDIDKIRPGMEATISGVAFGRHQLKGKLVAVNAQASNTSTGGLPSFTAVVEVNSLTPEQQSWIKVGMSASIELNVESNNQLLIPIAAVKREKGSSVVHVQLAKGKVQKRMITTGAAQADSVVVESGLKSGDVVVYD
>NZ_CP016874.1|WP_011216767.1|1928847_1930476_+|TolC-family-protein
MKFLNKSTALLPVIILSGLISFHASSAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKAAIANPEYMLKNWIELPTSPESKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLRLANNEFELQYALGASGVVQKSTFEGIGSSTNHSFLASPELDLKTKIGTKASVSIDNNVSTNNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRALILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDFKLASQELLQMIGLDPDLHISVPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADERAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYNGNNITESARVTLTIPLNDIGRRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYALEKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRYGG
>NZ_CP016874.1|WP_080020801.1|1927958_1928804_+|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MEQNAVPDYAIGDIQGCYDPLQRLLELIDFNEKDDCLWFVGDLVNRGPDSLAVLRFIYSLPVKPKITLGNHDLHLLGLLFGGQPWKGHDDTLEEVMLADDGEELGHWLRKQSLLCRSSELNIVMCHAGIAPLWDLSKAVGLANELEAVLSGDSYHEFFAQMYGNKPDIWSDDLVGLDRLRVITNYFTRMRYCDAHGRLDLGYKGTLSKAPNHLYPWFEVPCRKEIEMDIVFGHWAALMGRSSHPRIHAIDTGCLWGGQLTALRLQDRQRFSVPGYGVSRFE
>NZ_CP016874.1|WP_011216757.1|1943294_1943849_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLEISILPDSEFTTPVLMNAIYTNLHKALHTLASTSIGVSFPKYSSTLGNILRIHGKKEVLQDLQNLNWIGGMIGYCEASLIKTVPADTKFRTVSRKQPTMSQSKLRRLIKRNTLTEDEIRQYKAKMFSKGLDNPYIELVSVSNGQRHRRYIEFGELFNEPSPGLFDQFGLSNSATVPWFD
>NZ_CP016874.1|WP_011216756.1|1943858_1944884_-|type-I-F-CRISPR-associated-protein-Csy3
MTKKEHIASVLAFEKKLVPSDGYMYGCKWEHKDKATPLRLNEKSVRGTISNRLKPALQRDPAALNNEVEKPNLQTVDTCSLGSEEDTLKLYFTLKVLGGLKHPSACNNAAFKQSYQLAVSNYLETKGMRELAKRYALNIANARFLWRNRFGAENIQVEVRALNEGAEKSWNFNALDFNPRDLETTTNEVDSLADRIADALASDNDFLMLQITCYARIGKAQDVYPSEELVLDKGKGKKSKILYAVDGIAAMHSQKIGNALRTIDTWYPEFSDPVSSAGPIAIEPYGAVTNLGKAFRTPADKQDFYTFFDTWARGGELSRVEDEHYMMAVLVRGGVFGESDK
>NZ_CP016874.1|WP_070322272.1|1944899_1945841_-|type-I-F-CRISPR-associated-protein-Csy2
MSSNLILLPRIRVQNANALSSPFTIGFPAMTAWLGGVHALQRKLNTNNITVIFSAVGVVVHRFDLQIYKGPGDFVHSIVGTGNPLEPKSEKDKPKGNAVRPSFIEEPRCHLEVSLLVEYSGIEAQDEQLMLERIYQLMLGNMKLAGGDILNCKEPEILRDFQKAKRKLMPGYALIERRDLMQAAMEQGQDAMDAMLDYVAVHYSCTKEIVNGQERVIWQRKRKSTGLDDQTGWIVPIATGFHGISELGTAINQRDPDTPHLFAESVVTLGEFKMPYRLESPDDLLWRYHVESENNLYLCIQQKSISETSNDDY
>NZ_CP016874.1|WP_011216754.1|1945837_1947103_-|type-I-F-CRISPR-associated-protein-Csy1
MFDPAITDFFAERKKSWLKKKLKPDMTELEKNNILQECEDIFALENWLPNAAKRAGWMSISTHPCTFSHPSSRKNKNGYVTSIIAKAPRKADGYLRSGNVHVALDALGNAAALDVYKFLSLVTEDGKTIIEHIQQNTEVAKSLLSIKTDSYENLRVGFLEMVSSNEASITSSKIKQVYFPMGNEYHQLSVLSNSGMIFELRERIDALRFSDTVKRGRELRRGNFYSELGYKEIYDVTTIAYGGTKPQNVSVLNNQYGGKAYLLFSAPPMLEQREITFPTKDFFVQSIRYYDCKEILEQLDNIFKIECYGKISLDKIRKGRDRCLSDMLDMILQKMMVLREASKNQFRSQSSSLPDWQKIWLCEQYIEERVKRDDWLETLCVQIALWINSAYKNSIKHPTMLGEAERRYFNDFINQHREALR
>NZ_CP016874.1|WP_011216753.1|1947095_1950491_-|type-I-F-CRISPR-associated-helicase-Cas3
MMVIFVSQCEKKALARTRRVLDAFADRIGDNTWQTVITQEGLLAVKKLLRKTASKNTAVSCHWIRSRSRTELVWVVGNKGKFDREGRVAVNSTSKNQVYRDDLLDWKLLPVIQSLACLAALLHDWGKANARFQQKLAKNFKGIPADRLRHEWVSCLILKALILNTDNPYSDSDWLGTLKDGIINEDAIKTALRMSCEKPLADLPNIAKLIAWLVVSHHKLPVNPDNLFNGSECFSLDGLLKLIDKSWGYENKTVDEISLCLEFPHGLLTRSSKWLSQIKRWSAKVLGMEELISQTINDGSYCVLLHHARLSLMLGDHYFSSLDVNQTSNWKFTTELIANTQKDKSPKQALDQHLVGVYESARDVVAKLPLIENRLEFSFNTAELKRKSPPAYAWQDTAAKKVRDWRLSCNDTRKGFFAVNIASTGCGKTFANAKVMMALSEDGDSLRYVLALGLRTLTLQTGDEYRERIFNKNDGSDLAVLIGSKAIADLHYQSRLDQTYEQEQQGSESIESLLADSDEIVYQGELPEEGLTTILKKHKDRQLLYAPVLVCTIDHMIAATETTRGGRYILPSLRLLSSDLVIDEVDDFTGSDLIAIGRLIHLAGMLGRKVMISSATIPPAMAEGYFNAYREGWLLYCKTRNANPMVGCAWIDEFSTQVEEIGIREHATQEFRKIHDKYIDRRVKHLNKQPAKRKAIVINCEEVMKRSDEPVVKNKKEAWFNRIAQTTLDMHKLNNTIDKKTGLKVSFGVVRIANIQPCIQLTRYLLTYDWPEHSEARIMAYHSRQVLLLRHEQEKHLDKVLKRKEKRGEKPQAFYDETIRRHLDTIAANRPDVKNLLFILVATPVEEVGRDHDFDWAVIEPSSYRSIIQLAGRVMRHREDKIEYPNIAILQYNWRTIKYGDAERKPRFYFPGYEPDPRKRQANKLSNGKNDCLNSHDIFKIVDINLIKARLDSIPRIQEQPENSKTPMALLEHAVIESLLTNYEGKGPETLQGYIQWYWRLTALPQYLNRFRQSTKTTQLYRVANETGKAWFTERDTRGYFSYVNTGEFARQDDAYQISTLPLTAEQSQRLWIQRDYFHLLREQMEISEMSIDKAAIHYGEISLDVYPDSINTEYEYNDQLGLYKKESNHV
>NZ_CP016874.1|WP_011216752.1|1950487_1951456_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MEILTDLKAILHSKRANIYYLEKCRIMQKDGRVLYLTEAKNENQYWNIPIANTTCLLLGTGTSITQAAMRMLAQAGVLVGFCGGGGTPLLMANEVEWLTPQSEYRPTEYMQGWMKFWFDEQKRLYAAKQFQLSRIEYLRVHWKKSRDLAAEGFNSDDLQPELLSSELKIKKAKEVVKLMQNEAELTKQLYRYAANRTQYGKFIREREAIDKANIFLNHGNYLAYGLAATTLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDALILPWAFICAKENSSEQEFRQQCLQAFIDHKALDYMFEQVKAMALNTDWESENSEENLL
>NZ_CP016874.1|WP_011216749.1|1952648_1952939_+|helix-turn-helix-domain-containing-protein
MDKKLFERLYESMTQMNEIIDGERVPSREFVVDAVHIKEIRKKTGLTQEKFCHLIDVNIGTLRNWEQGRREPTGPAKALLRAINKDPEHVLAALAG
>NZ_CP016874.1|WP_011216748.1|1953228_1953420_-|hypothetical-protein
MRNKDEKAKEVATDSRCAESNRLTHLITGAILADNCFFPNGAYSIKPMVSSPQPPQEKTTPSM
>NZ_CP016874.1|WP_011216747.1|1953687_1954584_+|hypothetical-protein
MKDKTIPSPDAKSFNKKEFSENVAKGAIVGATSTTMTFGLFDKPLAIATKASSEVAQHPWRGIKSLFAGALNGSFSTSWNNSLYAQAYRAYLEHPVKGYPVALLNSCLKNVVFFPAKYGSERALYALSGNEQQAKNYSGFLAGLMTVYLTAPISVVKARLMTNVPLNTLSLKRLGSGVNAIAMRDCIQYGIYFNAKERLNEKIGDGVMAGGIAGIVGYVFSNPLSVIGLNQKTAVESVNIPNMAKRIYQANGVKGFYPLVGLAAWGMFARGVAIHQGTKLYESLQEKEAYGRPTRNRE
>NZ_CP016874.1|WP_011216746.1|1954981_1956469_-|lpg2912-family-Dot/Icm-T4SS-effector
MSYSKIDVLERKWSSLEAIVKSYTDPVEYHLPEIKKLMTAEFVVDFSSHAIYLHTEYVHRFTQQLINLRNTSPNDERLVYIHQLWTDLLNCRNQNPLKIKHHKKLDGECTFNFSLKMMEGKPYDFKEVQILDPNNTAEFNKAMGEIKRIDSLAHGANFGDLPFIGDIVLSSMLHYKETICFIAKDKNDEVIGYCWGMMLRDIPAGEKDKVNVFWVMNLAKHPDFYDPNIKVGEVLRQHLANTLSKNPDCHFLGYEHVLNHNFHLAIVDGGVPKKEETISIGQNQYQAKSLVKYEPLKMQYDRKHIIKTNNHQYPYPKVDVIKSNFFTALWYAAPTAFDFILGGMLIYGRAYYQQWTHSMLGQPVTHRIEKPISQEQQICDMNILKRIILSDVWGQQGTTLFFDACIPNTIQKLQQLVKEDQIEFASLQQCVAKSGWALCRSKLTAYFYFAITQSQYPSAAINLLIQNDMTPKKWIELISEERQIFAQQSSERASI

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Crispr_ID: NZ_CP016874_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016874_3

2577816-2577982

Orphan

Consensus_repeat	Method
AAATTACTGTTATGGCGGTAAATTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP016874_3

>merge|NZ_CP016874|3|2577816-2577982|CRISPRCasFinder
ATATTACTGTTATAGCAGTAAAAATGATAAAAATAAATTTATTATTGCATTTCCTTGCATTAATTCACCATAAATTACTGTTATGGCGGTAAATTTAATTGATTTCCTGATTTTCCCATATTTATTTATTATAAATTCCTAAAAATTACTGTTATCGCGGTAAATTT

>NZ_CP016874|3|3|2577816-2577982|CRISPRCasFinder
ATATTACTGTTATAGCAGTAAAAAT	GATAAAAATAAATTTATTATTGCATTTCCTTGCATTAATTCACCAT
AAATTACTGTTATGGCGGTAAATTT	AATTGATTTCCTGATTTTCCCATATTTATTTATTATAAATTCCTAA
AAATTACTGTTATCGCGGTAAATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016874.1\|WP_052585451.1\|2587867_2588260_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|379098
NZ_CP016874.1\|WP_011216262.1\|2571880_2572786_-\|Mrr-restriction-system-protein	unknown	unknown	gnl\|CDD\|377369
NZ_CP016874.1\|WP_044496821.1\|2589079_2589688_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379128
NZ_CP016874.1\|WP_129827326.1\|2578930_2580442_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP016874.1\|WP_080444601.1\|2587784_2587910_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP016874.1\|WP_070322486.1\|2585383_2586601_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP016874.1\|WP_044496813.1\|2589684_2590536_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP016874.1\|WP_011216259.1\|2576326_2577265_-\|HipA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377920
NZ_CP016874.1\|WP_011216258.1\|2577261_2577570_-\|toxin-HipA	unknown	unknown	gnl\|CDD\|274416
NZ_CP016874.1\|WP_011216264.1\|2569727_2570366_+\|methyltransferase	unknown	unknown	gnl\|CDD\|370496
NZ_CP016874.1\|WP_011216266.1\|2567368_2568823_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016874.1\|WP_145923833.1\|2584394_2585354_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223616
NZ_CP016874.1\|WP_011216263.1\|2570433_2570868_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016874.1\|WP_011216267.1\|2566094_2567003_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP016874.1\|WP_011216260.1\|2574713_2575802_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP016874.1\|WP_011216261.1\|2572984_2574358_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379049
NZ_CP016874.1\|WP_011216257.1\|2577569_2577794_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|213767
NZ_CP016874.1\|WP_044496812.1\|2586607_2587660_-\|LD-carboxypeptidase	unknown	unknown	gnl\|CDD\|132883
NZ_CP016874.1\|WP_011216256.1\|2578223_2578892_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016874.1\|WP_061466927.1\|2583241_2584306_+\|ThiF-family-adenylyltransferase	unknown	unknown	gnl\|CDD\|238386

Protein	Function_ID	Function_description	E-value
NZ_CP016874.1\|WP_052585451.1\|2587867_2588260_-\|IS3-family-transposase	gnl\|CDD\|379098	pfam13276, HTH_21, HTH-like domain. This domain contains a predicted helix-turn-helix suggesting a DNA-binding function.	1.23731e-12
NZ_CP016874.1\|WP_044496821.1\|2589079_2589688_+\|hypothetical-protein	gnl\|CDD\|379128	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin. AbiEi_4 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	3.91722e-10
NZ_CP016874.1\|WP_129827326.1\|2578930_2580442_-\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	2.17572e-16
NZ_CP016874.1\|WP_080444601.1\|2587784_2587910_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	0.00336282
NZ_CP016874.1\|WP_070322486.1\|2585383_2586601_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.47159e-10
NZ_CP016874.1\|WP_044496813.1\|2589684_2590536_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	1.0708e-43
NZ_CP016874.1\|WP_011216259.1\|2576326_2577265_-\|HipA-domain-containing-protein	gnl\|CDD\|377920	pfam07804, HipA_C, HipA-like C-terminal domain. The members of this family are similar to a region close to the C-terminus of the HipA protein expressed by various bacterial species. This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis. When expressed alone, it is toxic to bacterial cells, but it is usually tightly associated with HipB, and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products.	9.25522e-60
NZ_CP016874.1\|WP_011216258.1\|2577261_2577570_-\|toxin-HipA	gnl\|CDD\|274416	TIGR03071, couple_hipA, HipA N-terminal domain. Although Pfam models pfam07805 and pfam07804 currently are called HipA-like N-terminal domain and HipA-like C-terminal domain, respectively, those models hit the central and C-terminal regions of E. coli HipA but not the N-terminal region. This model hits the N-terminal region of HipA and its homologs, and also identifies proteins that lack match regions for pfam07804 and pfam07805.	4.82275e-45
NZ_CP016874.1\|WP_061466927.1\|2583241_2584306_+\|ThiF-family-adenylyltransferase	gnl\|CDD\|238386	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). .	5.38923e-46
NZ_CP016874.1\|WP_011216264.1\|2569727_2570366_+\|methyltransferase	gnl\|CDD\|370496	pfam09445, Methyltransf_15, RNA cap guanine-N2 methyltransferase. RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe Tgs1 and Giardia lamblia Tgs2 catalyze methylation of the exocyclic N2 amine of 7-methylguanosine.	3.69766e-29
NZ_CP016874.1\|WP_145923833.1\|2584394_2585354_+\|AAA-family-ATPase	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	4.26446e-40
NZ_CP016874.1\|WP_011216262.1\|2571880_2572786_-\|Mrr-restriction-system-protein	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	5.78788e-29
NZ_CP016874.1\|WP_011216267.1\|2566094_2567003_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.62318e-50
NZ_CP016874.1\|WP_011216260.1\|2574713_2575802_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.18165e-11
NZ_CP016874.1\|WP_011216261.1\|2572984_2574358_-\|ATP-binding-protein	gnl\|CDD\|379049	pfam13173, AAA_14, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.22163e-29
NZ_CP016874.1\|WP_011216257.1\|2577569_2577794_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|213767	TIGR03070, couple_hipB, transcriptional regulator, y4mF family. Members of this family belong to a clade of helix-turn-helix DNA-binding proteins, among the larger family pfam01381 (HTH_3; Helix-turn-helix). Members are similar in sequence to the HipB protein of E. coli. Genes for members of the seed alignment for this protein family were found to be closely linked to genes encoding proteins related to HipA. The HibBA operon appears to have some features in common with toxin-antitoxin post-segregational killing systems. [Regulatory functions, DNA interactions].	8.54843e-24
NZ_CP016874.1\|WP_044496812.1\|2586607_2587660_-\|LD-carboxypeptidase	gnl\|CDD\|132883	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	5.78468e-120

>NZ_CP016874.1|WP_011216257.1|2577569_2577794_-|helix-turn-helix-transcriptional-regulator
MPAHEIANLVHYYRKHSGLSQQELARLAGVGKTVIYDIEKGKESVRLNTLLKVLDVLNIQMKFETPFPQTRDNN
>NZ_CP016874.1|WP_011216258.1|2577261_2577570_-|toxin-HipA
MRKAYISVNGIRAGILEELEGKKYQFTYLNDYQGAPVSLTMPLTNKIYDFDVFPPFFEGLLPEGIMLEALLRKYKIDKNDYFGQLIIVGQDVVGAVTIEELR
>NZ_CP016874.1|WP_011216259.1|2576326_2577265_-|HipA-domain-containing-protein
MKRCPITYDLISDQENYSQRGLHLLSPQLKNLSPLDLSADEQRQEAIARVGKMSIQGVQKKLSAKLKIKEGGFEIVDQKGQYILKPQSDIYPELPENEAITMTLAKAIGLEVPVHGLVYSKDNSLTYFIKRFDRIGHNKKLALEDFAQLSGEDRHTKYKSSMEKVIAVIQQFCTFPKIEFVKLFKLTLFNFLVGNEDMHLKNFSLITKDRKISISPAYDLINSTIAQKNTKEEIALPLKGKKNNLTKSDFLKYFAVEKLGLNQNVIDGIVQEFHQIIPEWRKLIGFSFLSQQMQEKYIELLDQRCKRFNFFD
>NZ_CP016874.1|WP_011216260.1|2574713_2575802_+|DDE-type-integrase/transposase/recombinase
MKTFFILIFYLLRSFAIMLSPGGTKKLVAENIILRKQLIITNRTRKKAPNLTKWERLLFAFLSGIVGIQRLFKTAVVIKPETLLKLHKNLVNKKYSSLFSRNSKRKPGLKGPNQDIINAVIAMKQRNPRFGCRRIAMQMNNIFGLNIDKDVVRRILAKFYRPTSGDKGPSWLTFIGHMKDSLWSIDFFRCESINLKSFWVMIVMDQFSRRIIGFASHQGDLHGLAICCMFNKIISEIKPPKYLSSDNDPLFQFHRWQANLRILEIEEIKTIPYTPISHPFVERLIRICRNELLDQTLFWTKSDLAAKFALFQTYFNEKRAHMGINGDTPNQIVNHDKSQVIDIKNYRWQKLCRGLFQLPIAA
>NZ_CP016874.1|WP_011216261.1|2572984_2574358_-|ATP-binding-protein
MKRTLLKHLENWLISSDRKPLVIRGARQVGKTWLVRHFAEKSGKKLIELNFEKNPSYASLFNPNDPAKILLNLSTISNQKIDPEKCLLFLDEIQASPQLFSKLRWFAEDLPQLSVIAAGSLLEFVLAQHTFSMPVGRISYMHLEPLSFEEFLLANDKQSLYDYLYVYDLKTEVPAAIHENLTSLFKEYILVGGLPAVVSNWIKERSLNQVSQIQNDLLATYRDDFSKYSGRIATERLDEVMSSIPRMLGQKFIFSKVNKTIQSGTIKQILELLEKARISHRVKSCSANGVPLAAEVKEKYFKEIFLDVGLCSTALGLNLNQINSIDEIIMINNGGIAEQIVGQLLRTIDPPYIEPNLYCWHREEVGSSAEIDYVIQYGNKVIPIEVKAGSTGSLKSLHFFMGLKKYPFALRINSDYPNITNVDVKDNLGNPVKYNLISIPFYLVRQIHRLLTYVDLN
>NZ_CP016874.1|WP_011216262.1|2571880_2572786_-|Mrr-restriction-system-protein
MAKSRTRKIAEKTIFAAFNILKNAGGELRGKEVIDKIRETVEFDDYEKHIYEKTGYVRWESILHFYTIDCMKAGYLRKSKGFWILTDEGAEAIKLGPEHLLNSVNKIYRQWNAVRKTENHESEIEDIEQASIATGQVQKAILDQYEENANAGIREFICNKNPYEFQDLVAALLDTMGYHISHITERGPDGGIDIVAYTDPLGTKQPRIIVQVKHRPLDSVASDAIQKLSGTLKRNTDVGIFVTSGQFSKPAIKEAINSREHIELIDFDRLIELWIEYYPKMRDDQKNLLPLHPIYFLGSNE
>NZ_CP016874.1|WP_011216263.1|2570433_2570868_-|hypothetical-protein
MPFQLPFEKKKNPLNPERLCSSDICFVNLSVFSASELFAGADPEKVIQELTMVNKSYGSAISYNRLPAGSTKDLSEHSKYYLNLIDKAIEDVNLSLDDNSKATYSLRFALLQPLLVNLVAAAEVLKNEKTQEQEQKSSHSVRFM
>NZ_CP016874.1|WP_011216264.1|2569727_2570366_+|methyltransferase
MKSSEICPFGPKLQQYWDKRYDYFHRFDEGIQTDSEGLHTVMPEEATLTQAKLFNNAKIVVDGFCGIGGSAIALARTGKKVIAIEMDSVRLAMAKNNARVYGVEHLITFVHGDFFDVAAEIKADAVLIDPPWGWPRYRKIEEFRLQHFNPNGSKLLSYVLDHFNKIVLRAPKTFITSELDQFNVNYEIHSDKLHHSIISISVCITNHSKRKS
>NZ_CP016874.1|WP_011216266.1|2567368_2568823_-|hypothetical-protein
MENKTKALNFLNRIERCLVPQSNPQMMKQLLSALGLDNVTTGNEEYKFFIQTIRKKAIDLKLLIDKIKSDILKNEPLCTLLAYIEENELIDDAEIENASSTIQLQINLLCLLEAITITMANSNDFAHDIYNHMMKQRGKGATGNPFYNFLFGIPSRATLFERLKLISIDPGLTSIIFHRLMGANPETQADLDDFVSQNRLSGWNADIELANFDVASTSTLPAMGVNILEAVWEDATGHNKNTGGILNAQAGLGLIGIMEEQEYTTSFKLAETTLPQGTALHSDLGYSLIPELKVDNSPKKVSQFHIDKRWMNLYNSWNLCFVIANIDPVFVPLKLLIPSVFSAEPSNYKETRVLTLFLVANLFLNQKTLNHPLFSNNFSFRNGATIMKKWGEINKNHASELLQQCCLKEYKEPDALYNSIFGEHPHLNFVLKLVSYFQDSHQFRLTKTAKQTTLSDYSFFSGNAASMDNSEQLHLASQPSLNKV
>NZ_CP016874.1|WP_011216267.1|2566094_2567003_-|LysR-family-transcriptional-regulator
MNILSCLKGFIATVDCKSFSKAAQKLYISPSKLSKQITWLEEELKVTLLVRSTTRLTVTDSGHRLYEKSLQLFEQLEAVKVIATPDQLELNGVIRLYLTVTPAIPYLTTLSIQFMRQYPKIEVDIIVGSDTKELYSSTFDLAISFDDVKHSKLVCKMLFSIQRKVFASPAYIAQHGLPQTLDELPKHNCLINTLYGLQNKWVFNKKIIHVSGSFKSNNAGVLKQAAVADVGILWVPYFSVYEEIKNGALTPVLPHESSPEINLYAICPKSTVDEQKINLLLSFFCEKALSENIVTSFIDENN
>NZ_CP016874.1|WP_011216256.1|2578223_2578892_-|hypothetical-protein
MEFAKPVKVAFGRLEHIAFIKRHLDVYKKPDITQYPIAAYEFDFLDFIYSLGLINILAFVCISLFPSYFKYDPFKIFNIIPIMLLLIVNTVLVAAVIAFFHWGLCKGLGFIYKIKTHTFYEAGIFWRVFRVLSLSYLLITIPLLIQINSIFTHEGLGRTLNLISLLTIILMLMLQIKLFILPLYKIGKQFGKALGSIQSLLVIASALLINNFFGNRYHLVFL
>NZ_CP016874.1|WP_129827326.1|2578930_2580442_-|Fic-family-protein
MMKPSEKLAESLEVLHNLQKQGKYAIRSKDISRTHRERLVENAFLEEVVKGWYVPIKPDEQKGESTAWYASFWSFCASYLNERFGDEWCLSPEQSLLLHSENWTVPKQLMIRSPNGTNRNMELPHNTALFSVQYKMPAAQDIEIKQDMRIYAIVPALLYCSPKFFSQYPTEARSVLSMFNSASDLLHYLLEEGHSWIAGRICGALQNIGKSHIAEEIKKTMESAGYQIREEDPFLTNTPIDFSATYKPAYRSRLEVMWHDMRDTVRENFPKPRLTTIDIKKYIEQVDEKYISDAYHSLSIEGYQVSPDLIEKVRSGQWNPDATEQDRNHRSALAARGYWQAFQAVKKSLMEILNGDNPGKIIQKEHGDWYRELFQPSVAVGLLKPTDLAGYRRSPVFIRQSKHIPPRWQILSELMEEFFQLITQEKEPSVRVVLGHFFFVYIHPYSDGNGRIGRFLMNLMLASGHYPWTIIPVERRNEYMEALEQASVHQNILPFTKFIASCI
>NZ_CP016874.1|WP_061466927.1|2583241_2584306_+|ThiF-family-adenylyltransferase
MKQIKLNDNLYLQPYESQIIIHLPDDQSLKIEERELFIDLLYEIKRSGLNGLEEVYKQITLNHDLSREEFNDLIETLSDNNIIKFKTDYTHSLSDKELIKYDRQIKSFATLQSNNIDDAIHFQEKIKSSSVGILGVGGVGSYVSYGLASMGIGKLTLIDHDHIELSNTARQMLYNENDIGKQKLEVAQQKLNLVNPSMDIVTINKRITSSLDLEPHLDNLDILILCADTPRGKIVYMVDDACQNKGCPFIFGLPSFNQITCGPLIIPNKTRSYSEIFPVPIEIDIADISVSEKEKTNLINSGLVATIIDPYNAIAGKLVALEVIKFLTGFLPCQLIDRVFNFDTNTLSSSITEV
>NZ_CP016874.1|WP_145923833.1|2584394_2585354_+|AAA-family-ATPase
MLEAQTNIVLDGEWCLFKENNDKAIFNQIIQDHGPNINLQNALNYLLESESVYSNLISDYLVKYRGSSNRGNNILGQYGYNLLSLKEETCLHREQEQELIKICLTRNYKNNVMLIGSSGVGKTFLISSIARLMNLDIYYVDISSILSGSKYRGEFEKKFHTLLNEALKSKTTLFFDEAHTILNTGNSDGGISGADILKPYLMNSDFRMIGATTIDEAEAFTKDKAFSRRFNFLKLEELPIEKTKDIIKRKYTQTLNWDQKTFNKIFTYLDSVFLNRNYPDKALDFFDFYFSGERLSFFNINNDIEKVLNLFTKMNTIIA
>NZ_CP016874.1|WP_070322486.1|2585383_2586601_+|MFS-transporter
MPLFYRLLTYTILFSCIRMLIGGYASLYLMQHGFSIADISFLKAFQSLVIVLIQIPIGYLIDNRSNRYPFILISIFFAAIWMFLTAVGNNSIYFFIAELFNALSLAIFNAVMLPILVETYTYETGKNDYNYTLGKFFKYQNLLMAISVILGSGFVRIDSRYVWLVSAFLLFSTAIFSILSKDIKKFNFLPPSNSERKVKKHFRQIIELIKTENLMILLLVNIALTTVFQILAQFWQVIIYSYLDENTSYALTYGLIFSAILLLQAVGSHLAEKRSSLKLSLLSMLLFVGNTAYLIFFNNYFIFKVIPVILFIMSFILFKYPSIIISAILHKNINNKVRATFDSIISLLTMVISTIVFYLIGVLLNKYGNNVIMLSLGSLSLLSLLLTSVYLLKNKYTLKNSLAAA
>NZ_CP016874.1|WP_044496812.1|2586607_2587660_-|LD-carboxypeptidase
MQKLILPKKLSAGDKIAVISASWGGPGTFPYRYEIGKKRLQNVFGLEVVEMPHALSDSEWVYQNPKARADDLMQAFLDPTIKGIFSTIGGDDAIRLLPYINFEIIRKNPKVVLGYSDSTVIHFICLKAGLATFYGTSVMTGFAENVEMHDYTVQGIKQTLFTDNIIGNIPTPIEGWTKEYLDWKDPSNQNIKRKLQKTEKWEFIGNTQKIVQGRLLGGCIEVLQFINGTEIWPTLDIWSGCILFLETSEEGITPLALKRILRNLAAQGILSKIAGVLFSKPGGSHVFFPQFKEYGKAILEVFDEFEIPRASIVINMDFGHSDPMWIMPYGCLAEINPFEETVSLLETAVL
>NZ_CP016874.1|WP_080444601.1|2587784_2587910_-|IS3-family-transposase
MSRSVAKNHIFEYIEIYYNRKRLHARLDYGSPDEFEVKKVA
>NZ_CP016874.1|WP_052585451.1|2587867_2588260_-|IS3-family-transposase
MIKEASNQFKVQLMCSLLSVSASGYYAWLNRKPSRQAEKNLELTKKIKALFDEEKSRAGAPRITKRLHQQGVHVGKQRVARVMRQQGWRAKASKKFKATTNSNHQLPVAPNLLQQNLCLGQSLKIIYSNI
>NZ_CP016874.1|WP_044496821.1|2589079_2589688_+|hypothetical-protein
MKTKDSYKQIVLQMARKTGVIKMSDLTKQGITRATVSRLVNENKLEKLAPGLYCLPETKFSEKESLIIIASRVPQAVFCLLTALQIHDLTTQLPRKVWIAMPKGSHVPKMDYPPLKMVQYSDEAFSEGIEIIESDNIKLRVYKCAKTIADCFKHRNKIGLDVAIEALKEAYTKNKVTVDELWHYAKICRVANVMRPYIEAIQ
>NZ_CP016874.1|WP_044496813.1|2589684_2590536_+|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MTKNIGESVRSRLKNIAIKEGSDFNAILTRYGLERLLYRIGESEYSNQFLLKGALLFNLWYDMPHRPTKDIDLLGFGDNDLAYIKQTFSKICSISADDGINFLSESVTVDTIKKDGGYTGARVELFGELAKAKIKIQIDIGYGDAVTPGPIDAHYPVLLNDLPAPKIRTYPIYTVIAEKLHAIALLGMANSRLKDYLDLYVLLSNEQLDNQVLAKAIQATFTRRGMAIPEELPIGLTDEFANDPSRESMWKAFLRKNELEQKPLTEVIAVIRNLIQVPYSLAK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016874_2	2.31\|1941683\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941683-1941714	32	KT271770	Legionella pneumophila strain Murcia-2001 4983 plasmid Mobile Element-1, complete sequence	25183-25214	2	0.938
NZ_CP016874_2	2.37\|1942043\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1942043-1942074	32	KT271770	Legionella pneumophila strain Murcia-2001 4983 plasmid Mobile Element-1, complete sequence	20873-20904	2	0.938
NZ_CP016874_3	3.1\|2577841\|46\|NZ_CP016874\|CRISPRCasFinder	2577841-2577886	46	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	257659-257704	2	0.957
NZ_CP016874_2	2.38\|1942103\|33\|NZ_CP016874\|CRISPRCasFinder,CRT	1942103-1942135	33	KT271770	Legionella pneumophila strain Murcia-2001 4983 plasmid Mobile Element-1, complete sequence	19977-20009	5	0.848
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	106922-106953	6	0.812
NZ_CP016874_2	2.37\|1942043\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1942043-1942074	32	NC_028886	Bacillus phage phi4B1, complete genome	20314-20345	6	0.812
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	FN667788	Campylobacter phage CP220, complete genome	12917-12948	6	0.812
NZ_CP016874_1	1.6\|1939067\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1939067-1939098	32	AP018320	Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome	215093-215124	7	0.781
NZ_CP016874_1	1.18\|1939068\|32\|NZ_CP016874\|PILER-CR	1939068-1939099	32	AP018320	Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome	215093-215124	7	0.781
NZ_CP016874_2	2.5\|1940122\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940122-1940153	32	NZ_CP019368	Borrelia turicatae 91E135 isolate Oz1 plasmid lpT39, complete sequence	30632-30663	7	0.781
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	KX501134	Phage DP-2017a isolate CA39E hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds	3309-3340	7	0.781
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	KX501136	Phage DP-2017a isolate CA40B hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds	3309-3340	7	0.781
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	KX501135	Phage DP-2017a isolate CA40A hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds	3309-3340	7	0.781
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	KX501137	Phage DP-2017a isolate CA40C hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds	3309-3340	7	0.781
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	KX501138	Phage DP-2017a isolate CA40D hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds	3309-3340	7	0.781
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	KX501139	Phage DP-2017a isolate CA40E hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds	3309-3340	7	0.781
NZ_CP016874_2	2.7\|1940242\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940242-1940273	32	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	387218-387249	7	0.781
NZ_CP016874_2	2.7\|1940242\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940242-1940273	32	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	401169-401200	7	0.781
NZ_CP016874_2	2.13\|1940603\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940603-1940634	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	1062219-1062250	7	0.781
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NZ_CP044508	Chryseobacterium sp. strain SNU WT7 plasmid unnamed1, complete sequence	61282-61313	7	0.781
NZ_CP016874_2	2.24\|1941263\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941263-1941294	32	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	5966-5997	7	0.781
NZ_CP016874_2	2.30\|1941623\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941623-1941654	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	444237-444268	7	0.781
NZ_CP016874_2	2.41\|1942284\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942284-1942315	32	NZ_CP015635	Borrelia turicatae strain BTE5EL plasmid lp44	35291-35322	7	0.781
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	643709-643740	7	0.781
NZ_CP016874_2	2.46\|1942584\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942584-1942615	32	MN693762	Marine virus AFVG_250M302, complete genome	30004-30035	7	0.781
NZ_CP016874_2	2.46\|1942584\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942584-1942615	32	MN694601	Marine virus AFVG_250M301, complete genome	30003-30034	7	0.781
NZ_CP016874_2	2.51\|1942884\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942884-1942915	32	MN693967	Marine virus AFVG_250M992, complete genome	3939-3970	7	0.781
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NC_013164	Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence	109614-109645	7	0.781
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NZ_CP033927	Chryseobacterium joostei strain DSM 16927 plasmid unnamed, complete sequence	4127-4158	7	0.781
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NC_019507	Campylobacter phage CP21, complete genome	106769-106800	7	0.781
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	MT932329	Campylobacter phage F379, complete genome	169660-169691	7	0.781
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	HE815464	Campylobacter phage CP21 complete sequence	106769-106800	7	0.781
NZ_CP016874_1	1.12\|1939428\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1939428-1939459	32	NC_015169	Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence	182406-182437	8	0.75
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	KX879627	Campylobacter phage vB_CjeM_Los1, complete genome	131679-131710	8	0.75
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	MN694235	Marine virus AFVG_250M703, complete genome	24259-24290	8	0.75
NZ_CP016874_2	2.9\|1940362\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940362-1940393	32	MN694181	Marine virus AFVG_250M537, complete genome	23442-23473	8	0.75
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NZ_CP020745	Bacillus mycoides strain Gnyt1 plasmid unnamed2, complete sequence	109782-109813	8	0.75
NZ_CP016874_2	2.16\|1940783\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940783-1940814	32	NZ_CP020699	Sulfitobacter sp. D7 plasmid p5SUD7, complete sequence	59706-59737	8	0.75
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NZ_CP015644	Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence	41497-41528	8	0.75
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NZ_CP015644	Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence	55535-55566	8	0.75
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NZ_CP017431	Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence	129039-129070	8	0.75
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NZ_CP017431	Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence	143081-143112	8	0.75
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NZ_CP017429	Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence	4629-4660	8	0.75
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NZ_CP017429	Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence	18670-18701	8	0.75
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NZ_CP016158	Staphylococcus simulans strain MR2 plasmid unnamed1	3775-3806	8	0.75
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NZ_CP016158	Staphylococcus simulans strain MR2 plasmid unnamed1	17815-17846	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1745507-1745538	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	366517-366548	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.26\|1941383\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941383-1941414	32	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	31739-31770	8	0.75
NZ_CP016874_2	2.29\|1941563\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941563-1941594	32	MG945363	UNVERIFIED: Microviridae sp. isolate 3125-1711, complete genome	1758-1789	8	0.75
NZ_CP016874_2	2.31\|1941683\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941683-1941714	32	NC_017903	Escherichia coli Xuzhou21 plasmid pO157_Sal, complete sequence	23201-23232	8	0.75
NZ_CP016874_2	2.36\|1941983\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941983-1942014	32	NC_004775	Enterobacteria phage epsilon15, complete genome	30427-30458	8	0.75
NZ_CP016874_2	2.36\|1941983\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941983-1942014	32	NC_019691	Synechococcus sp. PCC 7502 plasmid pSYN7502.01, complete sequence	24966-24997	8	0.75
NZ_CP016874_2	2.36\|1941983\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941983-1942014	32	NZ_CP015507	Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence	77715-77746	8	0.75
NZ_CP016874_2	2.36\|1941983\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941983-1942014	32	MN694416	Marine virus AFVG_250M895, complete genome	40579-40610	8	0.75
NZ_CP016874_2	2.36\|1941983\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941983-1942014	32	NC_022775	Lactobacillus phage phiJB, complete genome	2839-2870	8	0.75
NZ_CP016874_2	2.39\|1942164\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1942164-1942195	32	NC_022882	Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence	213833-213864	8	0.75
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NZ_CP050095	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence	115164-115195	8	0.75
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	313004-313035	8	0.75
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	163142-163173	8	0.75
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	105247-105278	8	0.75
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	282828-282859	8	0.75
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	193794-193825	8	0.75
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	JQ177062	Bdellovibrio phage phi1422, complete genome	21141-21172	8	0.75
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	MK496762	Capybara microvirus Cap3_SP_315, complete genome	1128-1159	8	0.75
NZ_CP016874_1	1.10\|1939308\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1939308-1939339	32	MG869625	Polaromonas sp. W11N plasmid pW11NP2, complete sequence	48097-48128	9	0.719
NZ_CP016874_1	1.22\|1939309\|32\|NZ_CP016874\|PILER-CR	1939309-1939340	32	MG869625	Polaromonas sp. W11N plasmid pW11NP2, complete sequence	48097-48128	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NZ_CP050068	Klebsiella aerogenes strain 035 plasmid p35, complete sequence	111971-112002	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NZ_CP034201	Klebsiella pneumoniae subsp. pneumoniae strain KpvST383_NDM_OXA-48 plasmid pKpvST383L, complete sequence	26437-26468	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NZ_CP031582	Klebsiella pneumoniae strain N4b plasmid pIncHI1B-1502320, complete sequence	192781-192812	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NZ_CP040726	Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_virulence, complete sequence	327249-327280	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	CP052327	Klebsiella pneumoniae strain E16KP0017 plasmid pE16K0017-1, complete sequence	4933-4964	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NZ_CP050380	Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence	305938-305969	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NZ_CP031372	Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence	118156-118187	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	CP052240	Klebsiella pneumoniae strain E17KP0027 plasmid pE17KP0027-1, complete sequence	4933-4964	9	0.719
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NZ_CP032223	Klebsiella pneumoniae strain AR_0046 plasmid unnamed1, complete sequence	55313-55344	9	0.719
NZ_CP016874_2	2.9\|1940362\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940362-1940393	32	AP013375	Uncultured Mediterranean phage uvMED DNA, complete genome, group G13, isolate: uvMED-CGR-U-MedDCM-OCT-S29-C4	9358-9389	9	0.719
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NZ_KU882686	Staphylococcus lugdunensis strain Tlug63N-4 plasmid pT63N, complete sequence	16758-16789	9	0.719
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NZ_KR230047	Staphylococcus epidermidis strain SP1 plasmid pSP01, complete sequence	54818-54849	9	0.719
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NZ_CP042965	Bartonella krasnovii strain OE 1-1 plasmid pOE11-1, complete sequence	1900-1931	9	0.719
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	MK721197	Enterococcus phage vB_EfaP_Efmus2, complete genome	11742-11773	9	0.719
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NC_049939	Enterococcus phage vB_EfaP_Ef7.3, complete genome	12098-12129	9	0.719
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	LT630001	Enterococcus phage Idefix genome assembly, chromosome: IDF	11326-11357	9	0.719
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	MK721195	Enterococcus phage vB_EfaP_Efmus1, complete genome	11310-11341	9	0.719
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NC_049936	Enterococcus phage vB_EfaP_Efmus3, complete genome	11661-11692	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NZ_CP018235	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed7, complete sequence	65616-65647	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NZ_CP016290	Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence	236116-236147	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1090582-1090613	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NC_014111	Xylella fastidiosa plasmid pXF-RIV11, complete sequence	19013-19044	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NC_014113	Xylella fastidiosa plasmid pXF-RIV19, complete sequence	18280-18311	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NZ_CP006739	Xylella fastidiosa MUL0034 plasmid unnamed2, complete sequence	6996-7027	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NZ_CP048285	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence	380-411	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NC_017561	Xylella fastidiosa subsp. fastidiosa GB514 plasmid, complete sequence	14729-14760	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	3826-3857	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	318507-318538	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	MN813698	Gordonia phage Volt, complete genome	66726-66757	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	MH479925	Gordonia phage Ronaldo, complete genome	66562-66593	9	0.719
NZ_CP016874_2	2.21\|1941083\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941083-1941114	32	MK919478	Gordonia phage Ziko, complete genome	67030-67061	9	0.719
NZ_CP016874_2	2.27\|1941443\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941443-1941474	32	CP000617	Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence	212454-212485	9	0.719
NZ_CP016874_2	2.31\|1941683\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941683-1941714	32	NC_021336	Bacillus phage MG-B1, complete genome	7928-7959	9	0.719
NZ_CP016874_2	2.31\|1941683\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941683-1941714	32	MN938931	Streptococcus phage D4446, complete genome	21935-21966	9	0.719
NZ_CP016874_2	2.36\|1941983\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941983-1942014	32	NZ_CP021236	Pontibacter actiniarum strain DSM 19842 plasmid unnamed, complete sequence	169898-169929	9	0.719
NZ_CP016874_2	2.42\|1942344\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942344-1942375	32	MT179807	Escherichia phage vB_EcoM_IME537, complete genome	51335-51366	9	0.719
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NZ_CP018232	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete sequence	211726-211757	9	0.719
NZ_CP016874_2	2.45\|1942524\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942524-1942555	32	NZ_CP013486	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence	10396-10427	9	0.719
NZ_CP016874_2	2.5\|1940122\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940122-1940153	32	MN693140	Marine virus AFVG_25M121, complete genome	1139-1170	10	0.688
NZ_CP016874_2	2.9\|1940362\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940362-1940393	32	NZ_CP023282	Nostoc sp. CENA543 plasmid pCENA543b, complete sequence	1781-1812	10	0.688
NZ_CP016874_2	2.14\|1940663\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940663-1940694	32	NC_007105	Bacillus cereus E33L plasmid pE33L54, complete sequence	41208-41239	10	0.688
NZ_CP016874_2	2.14\|1940663\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940663-1940694	32	NZ_CP009966	Bacillus cereus E33L plasmid pBCO_2, complete sequence	41777-41808	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NZ_CP021525	Acetobacter ascendens strain SRCM101447 plasmid pAP1447-1	89499-89530	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554775	Lactococcus phage AM11, complete genome	9559-9590	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554773	Lactococcus phage AM8, complete genome	9559-9590	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554768	Lactococcus phage AM1, complete genome	9558-9589	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554769	Lactococcus phage AM2, complete genome	9558-9589	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554772	Lactococcus phage AM5, complete genome	10942-10973	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554770	Lactococcus phage AM3, complete genome	9559-9590	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554777	Lactococcus phage LW81, complete genome	10701-10732	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NC_049856	Lactococcus phage AM4, complete genome	10941-10972	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	NC_049856	Lactococcus phage AM4, complete genome	117486-117517	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554776	Lactococcus phage AM12, complete genome	9539-9570	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	MK721183	Enterococcus phage vB_EfaP_Ef7.2, complete genome	11715-11746	10	0.688
NZ_CP016874_2	2.15\|1940723\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940723-1940754	32	KY554774	Lactococcus phage AM9, complete genome	9558-9589	10	0.688
NZ_CP016874_2	2.17\|1940843\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940843-1940874	32	MN180248	UNVERIFIED: Wolbachia phage WO isolate Seq1WORi_AMD1 genomic sequence	4882-4913	10	0.688
NZ_CP016874_2	2.24\|1941263\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941263-1941294	32	NZ_CP014200	Escherichia coli strain MRE600 plasmid pMRE600-2, complete sequence	35145-35176	10	0.688
NZ_CP016874_2	2.24\|1941263\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941263-1941294	32	NZ_CP042885	Escherichia coli O10:H32 strain NMBU-W12E19 plasmid pNMBU-W12E19_01, complete sequence	91975-92006	10	0.688
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	NC_021796	Cellulophaga phage phi38:1, complete genome	17341-17372	10	0.688
NZ_CP016874_2	2.25\|1941323\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1941323-1941354	32	KC821612	Cellulophaga phage phi40:1, complete genome	17341-17372	10	0.688
NZ_CP016874_2	2.44\|1942464\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1942464-1942495	32	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	171884-171915	10	0.688
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NZ_CP054369	Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence	137519-137550	10	0.688
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NZ_CP012377	Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence	95658-95689	10	0.688
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NZ_CP050647	Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence	96526-96557	10	0.688
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NZ_CP010126	Escherichia coli strain C8 plasmid A, complete genome	70749-70780	10	0.688
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NZ_CP031323	Escherichia coli strain ST2350 isolate Es_ST2350_SE1_NDM_03_2018 plasmid pEsST2350_SE_2, complete sequence	32793-32824	10	0.688
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	30520-30551	11	0.656
NZ_CP016874_2	2.6\|1940182\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940182-1940213	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	163472-163503	11	0.656
NZ_CP016874_2	2.7\|1940242\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940242-1940273	32	NZ_LR215007	Mycoplasma conjunctivae strain NCTC10147 plasmid 11	591-622	11	0.656
NZ_CP016874_2	2.7\|1940242\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940242-1940273	32	LR214964	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 10	1858-1889	11	0.656
NZ_CP016874_2	2.7\|1940242\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940242-1940273	32	LR214969	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 15	1771-1802	11	0.656
NZ_CP016874_2	2.16\|1940783\|32\|NZ_CP016874\|CRISPRCasFinder,CRT	1940783-1940814	32	NC_019731	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.03, complete sequence	39408-39439	11	0.656
NZ_CP016874_2	2.53\|1943004\|32\|NZ_CP016874\|CRISPRCasFinder,CRT,PILER-CR	1943004-1943035	32	NZ_AP017969	Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence	61229-61260	11	0.656

1. spacer 2.31|1941683|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KT271770 (Legionella pneumophila strain Murcia-2001 4983 plasmid Mobile Element-1, complete sequence) position: , mismatch: 2, identity: 0.938

tcaaagaacagtcaagaaaaagaaaccaatca	CRISPR spacer
tcaaagaacagtcaagaaaaagaaaccaatat	Protospacer
******************************

2. spacer 2.37|1942043|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KT271770 (Legionella pneumophila strain Murcia-2001 4983 plasmid Mobile Element-1, complete sequence) position: , mismatch: 2, identity: 0.938

tttatctatcccttaatctcttgcgctgttat	CRISPR spacer
tttatctatcccttaatctcttgagcagttat	Protospacer
*********************** ** *****

3. spacer 3.1|2577841|46|NZ_CP016874|CRISPRCasFinder matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 2, identity: 0.957

gataaaaataaatttattattgcatttccttgcattaattcaccat	CRISPR spacer
gataaaaataaatttattattgcatttatttgcattaattcaccat	Protospacer
*************************** .*****************

4. spacer 2.38|1942103|33|NZ_CP016874|CRISPRCasFinder,CRT matches to KT271770 (Legionella pneumophila strain Murcia-2001 4983 plasmid Mobile Element-1, complete sequence) position: , mismatch: 5, identity: 0.848

tggtgccggtactcgcaggaactgttaatggtg	CRISPR spacer
tggtgcctgtactcgcaggaacagttaacaatg	Protospacer
******* ************** *****...**

5. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 6, identity: 0.812

gtgcaata--cgcacaagcaaagcaacagcaagc	CRISPR spacer
--gcaatggtcgcagaagcaaagcgacagcaaga	Protospacer
  *****.  **** *********.********

6. spacer 2.37|1942043|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_028886 (Bacillus phage phi4B1, complete genome) position: , mismatch: 6, identity: 0.812

tttatctatcccttaatctcttgcgctgttat	CRISPR spacer
ttcatctctcccttaatctcttgctttcttgt	Protospacer
**.**** **************** .* **.*

7. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 6, identity: 0.812

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
tatataataaaataacttaaagttttttgaaa	Protospacer
*.* * * **** ***************.***

8. spacer 1.6|1939067|32|NZ_CP016874|CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 7, identity: 0.781

attttgtctacattttcccgatgctttatatt	CRISPR spacer
cttttgtctacatttcccctatgcttcaatat	Protospacer
 **************.*** ******.*   *

9. spacer 1.18|1939068|32|NZ_CP016874|PILER-CR matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 7, identity: 0.781

attttgtctacattttcccgatgctttatatt	CRISPR spacer
cttttgtctacatttcccctatgcttcaatat	Protospacer
 **************.*** ******.*   *

10. spacer 2.5|1940122|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP019368 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpT39, complete sequence) position: , mismatch: 7, identity: 0.781

----ccttgtggttatgccttctatgttgtcgtaat	CRISPR spacer
taagtctag----tatgccttctatgttgttgtaat	Protospacer
    .** *    *****************.*****

11. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KX501134 (Phage DP-2017a isolate CA39E hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds) position: , mismatch: 7, identity: 0.781

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataatctacatttggttaaaacatcctctcta	Protospacer
*****.********* ********  **   *

12. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KX501136 (Phage DP-2017a isolate CA40B hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds) position: , mismatch: 7, identity: 0.781

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataatctacatttggttaaaacatcctctcta	Protospacer
*****.********* ********  **   *

13. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KX501135 (Phage DP-2017a isolate CA40A hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds) position: , mismatch: 7, identity: 0.781

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataatctacatttggttaaaacatcctctcta	Protospacer
*****.********* ********  **   *

14. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KX501137 (Phage DP-2017a isolate CA40C hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds) position: , mismatch: 7, identity: 0.781

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataatctacatttggttaaaacatcctctcta	Protospacer
*****.********* ********  **   *

15. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KX501138 (Phage DP-2017a isolate CA40D hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds) position: , mismatch: 7, identity: 0.781

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataatctacatttggttaaaacatcctctcta	Protospacer
*****.********* ********  **   *

16. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KX501139 (Phage DP-2017a isolate CA40E hypothetical protein, tape measure, hypothetical protein, LysM, D-like protein, hypothetical protein, type IV secretion protein, baseplate, hypothetical protein, hydrolase, hypothetical protein, helicase, primase, type III restriction endonuclease, and exonuclease genes, complete cds) position: , mismatch: 7, identity: 0.781

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataatctacatttggttaaaacatcctctcta	Protospacer
*****.********* ********  **   *

17. spacer 2.7|1940242|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 7, identity: 0.781

agtgcatag--tattattcatgataattgcatta	CRISPR spacer
--taaaaagtttatcattcattataattgcatta	Protospacer
  *. * **  ***.****** ************

18. spacer 2.7|1940242|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 7, identity: 0.781

agtgcatag--tattattcatgataattgcatta	CRISPR spacer
--taaaaagtttatcattcattataattgcatta	Protospacer
  *. * **  ***.****** ************

19. spacer 2.13|1940603|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 7, identity: 0.781

ttgtacattatggcacttctccttcgctgcaa	CRISPR spacer
ggcttccttatggcatgtctccttcgctgcaa	Protospacer
   * * ********. ***************

20. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP044508 (Chryseobacterium sp. strain SNU WT7 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
actttatatgaaatagagaattttgacttata	Protospacer
.** *  * ********.***********.**

21. spacer 2.24|1941263|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gtactcataatacctttttgtcatttcaaaga	CRISPR spacer
gatagcgtaatacctttttgtaatttcaatga	Protospacer
*    *.************** ******* **

22. spacer 2.30|1941623|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tgctgggtggccagtgccgttgcgctatcaga	CRISPR spacer
tgctcggtggccagtgccgtggcgcggccggc	Protospacer
**** *************** **** ..*.*

23. spacer 2.41|1942284|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015635 (Borrelia turicatae strain BTE5EL plasmid lp44) position: , mismatch: 7, identity: 0.781

gataacagtactataattagagaagttaaaga	CRISPR spacer
gacgttaatactattattaaagaagttaaaga	Protospacer
**.. .*.****** ****.************

24. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 7, identity: 0.781

-acggctacagtgcgcgagcttgtgcttaggat	CRISPR spacer
ggcggtca-agagcgcgagcttgtgctgaggaa	Protospacer
 .***..* ** *************** ****

25. spacer 2.46|1942584|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to MN693762 (Marine virus AFVG_250M302, complete genome) position: , mismatch: 7, identity: 0.781

gtata-gtagaatcattgtgtaatgttttttca	CRISPR spacer
-tctatgtagaatccttgtgtaatatttttaac	Protospacer
 * ** ******** *********.*****

26. spacer 2.46|1942584|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to MN694601 (Marine virus AFVG_250M301, complete genome) position: , mismatch: 7, identity: 0.781

gtata-gtagaatcattgtgtaatgttttttca	CRISPR spacer
-tctatgtagaatccttgtgtaatatttttaac	Protospacer
 * ** ******** *********.*****

27. spacer 2.51|1942884|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to MN693967 (Marine virus AFVG_250M992, complete genome) position: , mismatch: 7, identity: 0.781

tcattcacatttaactccaaattttgtttatt	CRISPR spacer
accattatatttaactcaaaattttatttatt	Protospacer
 *  *.*.********* *******.******

28. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NC_013164 (Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence) position: , mismatch: 7, identity: 0.781

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
cttatcccaaaaaaacttcaagttttttaaaa	Protospacer
. * **  ****.***** *************

29. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033927 (Chryseobacterium joostei strain DSM 16927 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
aggtttgaaaaagaactgaaagtttttgaaaa	Protospacer
 * **...********* ********* ****

30. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 7, identity: 0.781

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
tatataataaaataacttaaagttttttgaat	Protospacer
*.* * * **** ***************.**

31. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 7, identity: 0.781

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
tatataataaaataacttaaagttttttgaat	Protospacer
*.* * * **** ***************.**

32. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 7, identity: 0.781

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
tatataataaaataacttaaagttttttgaat	Protospacer
*.* * * **** ***************.**

33. spacer 1.12|1939428|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_015169 (Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequence) position: , mismatch: 8, identity: 0.75

caactttcaggcggtgtttgtgccgtggtact	CRISPR spacer
cagcacatcggcgatgtttttgccgtggtact	Protospacer
**.* . . ****.***** ************

34. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KX879627 (Campylobacter phage vB_CjeM_Los1, complete genome) position: , mismatch: 8, identity: 0.75

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattatcatttggataaaacagagagatgc	Protospacer
******  *************** *.  * *

35. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MN694235 (Marine virus AFVG_250M703, complete genome) position: , mismatch: 8, identity: 0.75

ataatttacatttggataaaacataatcagga	CRISPR spacer
caatctttgatttgaataaaacaaaatcagga	Protospacer
  * .**  *****.******** ********

36. spacer 2.9|1940362|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MN694181 (Marine virus AFVG_250M537, complete genome) position: , mismatch: 8, identity: 0.75

taagaaatggcacaagtattaaagaatgtagt	CRISPR spacer
taagaaatggcagaagtattaaaggtaaactt	Protospacer
************ ***********.  .   *

37. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP020745 (Bacillus mycoides strain Gnyt1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
atgattgttgaaatagaaaattttgacttgta	Protospacer
.. .*..  ***********************

38. spacer 2.16|1940783|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP020699 (Sulfitobacter sp. D7 plasmid p5SUD7, complete sequence) position: , mismatch: 8, identity: 0.75

attcaaatgattgctttggtcaaacagaatat	CRISPR spacer
accctcatgattgctttggcgaaacagaatgg	Protospacer
*..*  *************. *********.

39. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP015644 (Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gtacat-aagatttagggatagatttttcaaat	CRISPR spacer
-tatttccgaatttaggtattgatttttcaaat	Protospacer
 **. *  ..******* ** ************

40. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP015644 (Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gtacat-aagatttagggatagatttttcaaat	CRISPR spacer
-tatttccgaatttaggtattgatttttcaaat	Protospacer
 **. *  ..******* ** ************

41. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP017431 (Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtacat-aagatttagggatagatttttcaaat	CRISPR spacer
-tatttccgaatttaggtattgatttttcaaat	Protospacer
 **. *  ..******* ** ************

42. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP017431 (Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtacat-aagatttagggatagatttttcaaat	CRISPR spacer
-tatttccgaatttaggtattgatttttcaaat	Protospacer
 **. *  ..******* ** ************

43. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP017429 (Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

gtacat-aagatttagggatagatttttcaaat	CRISPR spacer
-tatttccgaatttaggtattgatttttcaaat	Protospacer
 **. *  ..******* ** ************

44. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP017429 (Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

gtacat-aagatttagggatagatttttcaaat	CRISPR spacer
-tatttccgaatttaggtattgatttttcaaat	Protospacer
 **. *  ..******* ** ************

45. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP016158 (Staphylococcus simulans strain MR2 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

gtacat-aagatttagggatagatttttcaaat	CRISPR spacer
-tatttccgaatttaggtattgatttttcaaat	Protospacer
 **. *  ..******* ** ************

46. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP016158 (Staphylococcus simulans strain MR2 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

gtacat-aagatttagggatagatttttcaaat	CRISPR spacer
-tatttccgaatttaggtattgatttttcaaat	Protospacer
 **. *  ..******* ** ************

47. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

48. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

49. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

50. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

51. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

52. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

53. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

54. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

55. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

56. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

57. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

58. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

59. spacer 2.26|1941383|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaatacgcacaagcaaagcaacagcaagc	CRISPR spacer
gggcagtacgcaccagcaaagcaacgcgcatc	Protospacer
* ***.******* ***********.   * *

60. spacer 2.29|1941563|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MG945363 (UNVERIFIED: Microviridae sp. isolate 3125-1711, complete genome) position: , mismatch: 8, identity: 0.75

tacaggctggagatattgttccagtcttgtct	CRISPR spacer
ttaatgctggagatattgttcctttctttctt	Protospacer
*  * *****************  **** ..*

61. spacer 2.31|1941683|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_017903 (Escherichia coli Xuzhou21 plasmid pO157_Sal, complete sequence) position: , mismatch: 8, identity: 0.75

tcaaagaacagtcaagaaaaagaaaccaatca	CRISPR spacer
acaaaaaacagtcaagaaatagaaaaaacttc	Protospacer
 ****.************* *****  * *.

62. spacer 2.36|1941983|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_004775 (Enterobacteria phage epsilon15, complete genome) position: , mismatch: 8, identity: 0.75

tgaagagatggcaaaaaagactgtgttgagaa	CRISPR spacer
cgatgagatggcaaaaaagacggtgatccgcc	Protospacer
.** ***************** *** *  *

63. spacer 2.36|1941983|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_019691 (Synechococcus sp. PCC 7502 plasmid pSYN7502.01, complete sequence) position: , mismatch: 8, identity: 0.75

tgaagagatggcaaaaaagactgtgttgagaa	CRISPR spacer
tgaagagatggcaaagaatactggtaagggat	Protospacer
***************.** ****    *.**

64. spacer 2.36|1941983|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP015507 (Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence) position: , mismatch: 8, identity: 0.75

tgaagagatggcaaaaaagactgtgttgagaa-----	CRISPR spacer
tgaagagatggtaaaaaaga-----ttgggagacagc	Protospacer
***********.********     ***.**.

65. spacer 2.36|1941983|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MN694416 (Marine virus AFVG_250M895, complete genome) position: , mismatch: 8, identity: 0.75

tgaagagatggcaaaaaagactgtgttgagaa	CRISPR spacer
gaatgagatggctaaaaagacagtgttccgga	Protospacer
 .* ******** ******** *****  *.*

66. spacer 2.36|1941983|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 8, identity: 0.75

tgaagagatggcaaaaaagactgtgttgagaa---	CRISPR spacer
ataagagatggcaaaaaagatt---ctgagactca	Protospacer
  ******************.*   .*****

67. spacer 2.39|1942164|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_022882 (Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence) position: , mismatch: 8, identity: 0.75

ctagttctccatttttaatttatgaagcagat	CRISPR spacer
ataattctccatttttaatttttgaacagtgt	Protospacer
 **.***************** ****  . .*

68. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050095 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence) position: , mismatch: 8, identity: 0.75

acggctacagtgcgcgagcttgtgcttaggat--	CRISPR spacer
gcggcaacagtgcgcgcgcttgtg--gaggccgg	Protospacer
.**** ********** *******   *** .

69. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 8, identity: 0.75

acggctacagtgcgcgagcttgtgcttaggat--	CRISPR spacer
gcggcaacagtgcgcgcgcttgtg--gaggccgg	Protospacer
.**** ********** *******   *** .

70. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 8, identity: 0.75

acggctacagtgcgcgagcttgtgcttaggat--	CRISPR spacer
gcggcaacagtgcgcgcgcttgtg--gaggccgg	Protospacer
.**** ********** *******   *** .

71. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 8, identity: 0.75

acggctacagtgcgcgagcttgtgcttaggat--	CRISPR spacer
gcggcaacagtgcgcgcgcttgtg--gaggccgg	Protospacer
.**** ********** *******   *** .

72. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 8, identity: 0.75

acggctacagtgcgcgagcttgtgcttaggat--	CRISPR spacer
gcggcaacagtgcgcgcgcttgtg--gaggccgg	Protospacer
.**** ********** *******   *** .

73. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 8, identity: 0.75

acggctacagtgcgcgagcttgtgcttaggat--	CRISPR spacer
gcggcaacagtgcgcgcgcttgtg--gaggccgg	Protospacer
.**** ********** *******   *** .

74. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to JQ177062 (Bdellovibrio phage phi1422, complete genome) position: , mismatch: 8, identity: 0.75

acggctacagtgcgcgagcttgtgcttaggat---	CRISPR spacer
tcggctacagtgcgcgagcgagtg---ggggtatc	Protospacer
 ******************  ***   .**.*

75. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to MK496762 (Capybara microvirus Cap3_SP_315, complete genome) position: , mismatch: 8, identity: 0.75

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
ttttatttgaaagaacataaagttttttcaaa	Protospacer
* ** .  .******* *********** ***

76. spacer 1.10|1939308|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MG869625 (Polaromonas sp. W11N plasmid pW11NP2, complete sequence) position: , mismatch: 9, identity: 0.719

gaattaatggaagacaaagacgcgccgcaaga	CRISPR spacer
ggaggctcggaaaacaaagacgccccgcaagc	Protospacer
*.*    .****.********** *******

77. spacer 1.22|1939309|32|NZ_CP016874|PILER-CR matches to MG869625 (Polaromonas sp. W11N plasmid pW11NP2, complete sequence) position: , mismatch: 9, identity: 0.719

gaattaatggaagacaaagacgcgccgcaaga	CRISPR spacer
ggaggctcggaaaacaaagacgccccgcaagc	Protospacer
*.*    .****.********** *******

78. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP050068 (Klebsiella aerogenes strain 035 plasmid p35, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

79. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP034201 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST383_NDM_OXA-48 plasmid pKpvST383L, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

80. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP031582 (Klebsiella pneumoniae strain N4b plasmid pIncHI1B-1502320, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

81. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP040726 (Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_virulence, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

82. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to CP052327 (Klebsiella pneumoniae strain E16KP0017 plasmid pE16K0017-1, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

83. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP050380 (Klebsiella pneumoniae strain 51015 plasmid p51015_NDM_1, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

84. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP031372 (Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

85. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to CP052240 (Klebsiella pneumoniae strain E17KP0027 plasmid pE17KP0027-1, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

86. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP032223 (Klebsiella pneumoniae strain AR_0046 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ataatttacatttggataaaacataatcagga	CRISPR spacer
ataattaacatttgtataaaacagtaggtgag	Protospacer
****** ******* ********  *   *..

87. spacer 2.9|1940362|32|NZ_CP016874|CRISPRCasFinder,CRT matches to AP013375 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G13, isolate: uvMED-CGR-U-MedDCM-OCT-S29-C4) position: , mismatch: 9, identity: 0.719

taagaaatggcacaagtattaaagaatgtagt	CRISPR spacer
atataaatggcagaagtatttaagaatgctta	Protospacer
  * ******** ******* *******.

88. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_KU882686 (Staphylococcus lugdunensis strain Tlug63N-4 plasmid pT63N, complete sequence) position: , mismatch: 9, identity: 0.719

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
cccataaaagaaattgaaaatattgactttat	Protospacer
 *..* ******** ****** *******

89. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_KR230047 (Staphylococcus epidermidis strain SP1 plasmid pSP01, complete sequence) position: , mismatch: 9, identity: 0.719

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
cccataaaagaaattgaaaatattgactttat	Protospacer
 *..* ******** ****** *******

90. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP042965 (Bartonella krasnovii strain OE 1-1 plasmid pOE11-1, complete sequence) position: , mismatch: 9, identity: 0.719

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
aatgtcaaagaaatacataattttgtatcaga	Protospacer
. ************* * *******  *.. *

91. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MK721197 (Enterococcus phage vB_EfaP_Efmus2, complete genome) position: , mismatch: 9, identity: 0.719

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
tctctcaaagcaatagaaaatttttggaagtt	Protospacer
 ** ****** ************* .   **

92. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_049939 (Enterococcus phage vB_EfaP_Ef7.3, complete genome) position: , mismatch: 9, identity: 0.719

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
tctctcaaagcaatagaaaatttttggaagtt	Protospacer
 ** ****** ************* .   **

93. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to LT630001 (Enterococcus phage Idefix genome assembly, chromosome: IDF) position: , mismatch: 9, identity: 0.719

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
tctctcaaagcaatagaaaatttttggaagtt	Protospacer
 ** ****** ************* .   **

94. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MK721195 (Enterococcus phage vB_EfaP_Efmus1, complete genome) position: , mismatch: 9, identity: 0.719

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
tctctcaaagcaatagaaaatttttggaagtt	Protospacer
 ** ****** ************* .   **

95. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_049936 (Enterococcus phage vB_EfaP_Efmus3, complete genome) position: , mismatch: 9, identity: 0.719

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
tctctcaaagcaatagaaaatttttggaagtt	Protospacer
 ** ****** ************* .   **

96. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP018235 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed7, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaagg---atggac	CRISPR spacer
acgacgacgaggaaggaatcgcaaggcgtctg---	Protospacer
   *****.********* *******    **

97. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP016290 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaagg---atggac	CRISPR spacer
acgacgacgaggaaggaatcgcaaggcgtctg---	Protospacer
   *****.********* *******    **

98. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaaggatggac	CRISPR spacer
cagaccacaaggaaggaaacgcagaccgagat	Protospacer
** ** *****************..   .**.

99. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_014111 (Xylella fastidiosa plasmid pXF-RIV11, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaaggatggac	CRISPR spacer
gagaagaaaaggaaggagacgcaaggattccg	Protospacer
 * * ** *********.**********

100. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_014113 (Xylella fastidiosa plasmid pXF-RIV19, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaaggatggac	CRISPR spacer
gagaagaaaaggaaggagacgcaaggattccg	Protospacer
 * * ** *********.**********

101. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP006739 (Xylella fastidiosa MUL0034 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaaggatggac	CRISPR spacer
gagaagaaaaggaaggagacgcaaggattccg	Protospacer
 * * ** *********.**********

102. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP048285 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaagg-atggac	CRISPR spacer
acgacgacgaggaaggaaccgcaaggcgtcgg-	Protospacer
   *****.********* ******* .* *.

103. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_017561 (Xylella fastidiosa subsp. fastidiosa GB514 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaaggatggac	CRISPR spacer
gagaagaaaaggaaggagacgcaaggattccg	Protospacer
 * * ** *********.**********

104. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaagg---atggac	CRISPR spacer
acgacgacgaggaaggaatcgcaaggcgtctg---	Protospacer
   *****.********* *******    **

105. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaagg---atggac	CRISPR spacer
acgacgacgaggaaggaatcgcaaggcgtctg---	Protospacer
   *****.********* *******    **

106. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MN813698 (Gordonia phage Volt, complete genome) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaaggatggac	CRISPR spacer
aacacgaaaagaaaggaaacgcaaggctattg	Protospacer
 *.**** ***.************** *.

107. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MH479925 (Gordonia phage Ronaldo, complete genome) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaaggatggac	CRISPR spacer
aacacgaaaagaaaggaaacgcaaggctattg	Protospacer
 *.**** ***.************** *.

108. spacer 2.21|1941083|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MK919478 (Gordonia phage Ziko, complete genome) position: , mismatch: 9, identity: 0.719

catacgacaaggaaggaaacgcaaggatggac	CRISPR spacer
aacacgaaaagaaaggaaacgcaaggctattg	Protospacer
 *.**** ***.************** *.

109. spacer 2.27|1941443|32|NZ_CP016874|CRISPRCasFinder,CRT matches to CP000617 (Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence) position: , mismatch: 9, identity: 0.719

gatttccgtgttttcctgctctccgactgcct	CRISPR spacer
ggattccgtgtttttctgctcgccgatgtttt	Protospacer
*. ***********.****** ****.  ..*

110. spacer 2.31|1941683|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_021336 (Bacillus phage MG-B1, complete genome) position: , mismatch: 9, identity: 0.719

tcaaagaacagtcaagaaaaagaaaccaatca	CRISPR spacer
aaaaagaacagtcaacaaaaagcaataaaggg	Protospacer
  ************* ****** **. **  .

111. spacer 2.31|1941683|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MN938931 (Streptococcus phage D4446, complete genome) position: , mismatch: 9, identity: 0.719

tcaaagaacagtcaagaaaaagaaaccaatca	CRISPR spacer
gttgaaaacagtcaagaaaatgtaaccaaccg	Protospacer
 . .*.************** * ******.*.

112. spacer 2.36|1941983|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP021236 (Pontibacter actiniarum strain DSM 19842 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgaagagatggcaaaaaagactgtgttgagaa	CRISPR spacer
gaaagagatggctcaaaagactgtgaaaacta	Protospacer
 .**********  ***********  .*  *

113. spacer 2.42|1942344|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to MT179807 (Escherichia phage vB_EcoM_IME537, complete genome) position: , mismatch: 9, identity: 0.719

atttaacttataggcgtcaatttgattcagca	CRISPR spacer
tgccgaatgataggcgtcaaattgtttcagca	Protospacer
  ...* * *********** *** *******

114. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018232 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

acggctacagtgcgcgagcttgtgcttaggat----	CRISPR spacer
gcggcaacagtgcgcgcgcttgtg----gaagccgg	Protospacer
.**** ********** *******    *.*

115. spacer 2.45|1942524|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013486 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence) position: , mismatch: 9, identity: 0.719

gattgataatgattaagtgtcatatgtgtaat	CRISPR spacer
aaggtcaaatgagtaagtgtgatatgtgtatt	Protospacer
.*     ***** ******* ********* *

116. spacer 2.5|1940122|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MN693140 (Marine virus AFVG_25M121, complete genome) position: , mismatch: 10, identity: 0.688

ccttgtggttatgccttctatgttgtcgtaat	CRISPR spacer
cgcctctgttatgccttctatgctatcgtatc	Protospacer
* .. . ***************.*.***** .

117. spacer 2.9|1940362|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP023282 (Nostoc sp. CENA543 plasmid pCENA543b, complete sequence) position: , mismatch: 10, identity: 0.688

taagaaatggcacaagtattaaagaatgtagt	CRISPR spacer
ttttttgtggcacaagtttaaaagaatgtaag	Protospacer
*     .********** * **********.

118. spacer 2.14|1940663|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_007105 (Bacillus cereus E33L plasmid pE33L54, complete sequence) position: , mismatch: 10, identity: 0.688

cccaaatgactttggtctaacgtaacatctat	CRISPR spacer
aggaaatgactttggtcttacgtcactagcag	Protospacer
   *************** **** **   .*

119. spacer 2.14|1940663|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP009966 (Bacillus cereus E33L plasmid pBCO_2, complete sequence) position: , mismatch: 10, identity: 0.688

cccaaatgactttggtctaacgtaacatctat	CRISPR spacer
aggaaatgactttggtcttacgtcactagcag	Protospacer
   *************** **** **   .*

120. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP021525 (Acetobacter ascendens strain SRCM101447 plasmid pAP1447-1) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
actgtcaaaaaaacagaaaattttttcaccat	Protospacer
.********.***.**********  * .

121. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554775 (Lactococcus phage AM11, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgaaga	Protospacer
 . .******** ******* ******  . *

122. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554773 (Lactococcus phage AM8, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgaaga	Protospacer
 . .******** ******* ******  . *

123. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554768 (Lactococcus phage AM1, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgaaga	Protospacer
 . .******** ******* ******  . *

124. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554769 (Lactococcus phage AM2, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgaaga	Protospacer
 . .******** ******* ******  . *

125. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554772 (Lactococcus phage AM5, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgcaga	Protospacer
 . .******** ******* ****** .. *

126. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554770 (Lactococcus phage AM3, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgaaga	Protospacer
 . .******** ******* ******  . *

127. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554777 (Lactococcus phage LW81, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ctaatcaaagaactagaaaagtttgacgaaga	Protospacer
 . .******** ******* ******  . *

128. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_049856 (Lactococcus phage AM4, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgcaga	Protospacer
 . .******** ******* ****** .. *

129. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_049856 (Lactococcus phage AM4, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgcaga	Protospacer
 . .******** ******* ****** .. *

130. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554776 (Lactococcus phage AM12, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgaaga	Protospacer
 . .******** ******* ******  . *

131. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MK721183 (Enterococcus phage vB_EfaP_Ef7.2, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
tctctcaaagcaatagaaaatttttgaaaatt	Protospacer
 ** ****** ************* .   .*

132. spacer 2.15|1940723|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KY554774 (Lactococcus phage AM9, complete genome) position: , mismatch: 10, identity: 0.688

gctgtcaaagaaatagaaaattttgacttgta	CRISPR spacer
ttaatcaaagaactagaaaagtttgacgaaga	Protospacer
 . .******** ******* ******  . *

133. spacer 2.17|1940843|32|NZ_CP016874|CRISPRCasFinder,CRT matches to MN180248 (UNVERIFIED: Wolbachia phage WO isolate Seq1WORi_AMD1 genomic sequence) position: , mismatch: 10, identity: 0.688

gtctttacttgtcaatcgggaatgttgcgact	CRISPR spacer
actctgctttgtaaatcgggaatgttgctacc	Protospacer
....*  .**** *************** **.

134. spacer 2.24|1941263|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP014200 (Escherichia coli strain MRE600 plasmid pMRE600-2, complete sequence) position: , mismatch: 10, identity: 0.688

gtactcataatacctttttgtcatttcaaaga	CRISPR spacer
agaagcataataccattttgtcttttcacttt	Protospacer
. *  ********* ******* *****

135. spacer 2.24|1941263|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_CP042885 (Escherichia coli O10:H32 strain NMBU-W12E19 plasmid pNMBU-W12E19_01, complete sequence) position: , mismatch: 10, identity: 0.688

gtactcataatacctttttgtcatttcaaaga	CRISPR spacer
agaagcataataccattttgtcttttcacttt	Protospacer
. *  ********* ******* *****

136. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_021796 (Cellulophaga phage phi38:1, complete genome) position: , mismatch: 10, identity: 0.688

gtacataagatttagggatagatttttcaaat	CRISPR spacer
cctcggaagttttagggatagttttttcatcc	Protospacer
 . *. *** *********** *******  .

137. spacer 2.25|1941323|32|NZ_CP016874|CRISPRCasFinder,CRT matches to KC821612 (Cellulophaga phage phi40:1, complete genome) position: , mismatch: 10, identity: 0.688

gtacataagatttagggatagatttttcaaat	CRISPR spacer
cctcggaagttttagggatagttttttcatcc	Protospacer
 . *. *** *********** *******  .

138. spacer 2.44|1942464|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 10, identity: 0.688

acggctacagtgcgcgagcttgtgcttaggat	CRISPR spacer
gcggcaacagtgcgcgcgcttgtggaggccag	Protospacer
.**** ********** *******   .  *

139. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054369 (Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence) position: , mismatch: 10, identity: 0.688

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
actgtcagaaaagaactgaacgtttttccgtc	Protospacer
  * ************* ** ******. .

140. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012377 (Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence) position: , mismatch: 10, identity: 0.688

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
actgtcagaaaagaactgaacgtttttccgtc	Protospacer
  * ************* ** ******. .

141. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050647 (Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence) position: , mismatch: 10, identity: 0.688

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
actgtcagaaaagaactgaacgtttttccgtc	Protospacer
  * ************* ** ******. .

142. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010126 (Escherichia coli strain C8 plasmid A, complete genome) position: , mismatch: 10, identity: 0.688

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
actgtcagaaaagaactgaacgtttttccgtc	Protospacer
  * ************* ** ******. .

143. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031323 (Escherichia coli strain ST2350 isolate Es_ST2350_SE1_NDM_03_2018 plasmid pEsST2350_SE_2, complete sequence) position: , mismatch: 10, identity: 0.688

tgtttcagaaaagaacttaaagttttttaaaa	CRISPR spacer
actgtcagaaaagaactgaacgtttttccgtc	Protospacer
  * ************* ** ******. .

144. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 11, identity: 0.656

ataatttacatttggataaaacataatcagga	CRISPR spacer
tatttttaaatttggataaaatataatactag	Protospacer
    **** ************.*****   ..

145. spacer 2.6|1940182|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 11, identity: 0.656

ataatttacatttggataaaacataatcagga	CRISPR spacer
tatttttaaatttggataaaatataatactag	Protospacer
    **** ************.*****   ..

146. spacer 2.7|1940242|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NZ_LR215007 (Mycoplasma conjunctivae strain NCTC10147 plasmid 11) position: , mismatch: 11, identity: 0.656

agtgcatagtattattcatgataattgcatta	CRISPR spacer
cccgcatagtattattcttgatattttttgct	Protospacer
  .************** ***** ** .  .

147. spacer 2.7|1940242|32|NZ_CP016874|CRISPRCasFinder,CRT matches to LR214964 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 10) position: , mismatch: 11, identity: 0.656

agtgcatagtattattcatgataattgcatta	CRISPR spacer
cccgcatagtattattcttgatattttttgct	Protospacer
  .************** ***** ** .  .

148. spacer 2.7|1940242|32|NZ_CP016874|CRISPRCasFinder,CRT matches to LR214969 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 15) position: , mismatch: 11, identity: 0.656

agtgcatagtattattcatgataattgcatta	CRISPR spacer
cccgcatagtattattcttgatattttttgct	Protospacer
  .************** ***** ** .  .

149. spacer 2.16|1940783|32|NZ_CP016874|CRISPRCasFinder,CRT matches to NC_019731 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.03, complete sequence) position: , mismatch: 11, identity: 0.656

attcaaatgattgctttggtcaaacagaatat	CRISPR spacer
ccagaaatgattgccttgctcaaacagccgtc	Protospacer
 .  **********.*** ********    .

150. spacer 2.53|1943004|32|NZ_CP016874|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017969 (Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence) position: , mismatch: 11, identity: 0.656

tgtttcagaaaagaacttaaagttttttaaaa-----	CRISPR spacer
-attt----aaaaaacttaaagttattttttatagtc	Protospacer
 .***    ***.*********** ***   *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

546275 : 552212

Staphylococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011215285.1\|546275_547100_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.8e-53	43.9
WP_011215284.1\|547096_548734_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.1e-154	52.3
WP_011215283.1\|548859_549327_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.0e-22	49.1
WP_011215282.1\|549334_550543_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.1e-99	48.7
WP_011215281.1\|550539_551154_-	riboflavin synthase	A0A2I2L4R9	Orpheovirus	6.0e-22	39.5
WP_011215280.1\|551138_552212_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.4e-29	27.5

DBSCAN-SWA_2

888383 : 895222

Acinetobacter_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011215026.1\|888383_889181_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-21	33.8
WP_010946576.1\|889547_890510_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.2e-38	34.1
WP_010946575.1\|890499_891051_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	1.5e-27	47.7
WP_011215025.1\|891047_891617_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_011215024.1\|891597_892107_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_010946572.1\|892103_892829_+	LPS export ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-17	28.3
WP_011215023.1\|892862_893441_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.0e-55	53.2
WP_011215022.1\|893418_894453_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	2.1e-75	47.6
WP_011215021.1\|894445_895222_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	3.9e-58	48.6

DBSCAN-SWA_3

905549 : 971147

Pseudomonas_phage(18.18%)

protease,transposase,coat,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011215012.1\|905549_906149_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_011215011.1\|906279_906654_+	hypothetical protein	NA	NA	NA	NA
WP_011215010.1\|906654_907905_-	O-antigen ligase family protein	NA	NA	NA	NA
WP_011215009.1\|907907_908687_-	glycosyltransferase family 2 protein	S5WBE2	Pseudomonas_phage	3.4e-06	30.1
WP_080020511.1\|908910_911184_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.6e-167	42.3
WP_011215007.1\|911209_911545_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	5.8e-11	36.5
WP_011215006.1\|911946_913203_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.9e-14	74.1
WP_011215005.1\|913312_914011_-	hypothetical protein	NA	NA	NA	NA
WP_080020510.1\|914205_914874_+	pseudouridine synthase	NA	NA	NA	NA
WP_011215003.1\|914809_915289_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_010946548.1\|915285_916194_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_011213320.1\|916171_917209_-	rod shape-determining protein	NA	NA	NA	NA
WP_011215002.1\|917404_917722_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_011215001.1\|917813_919229_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_011215000.1\|919203_920295_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_011214999.1\|920291_921134_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_011214998.1\|921130_922570_-	cation:proton antiporter	NA	NA	NA	NA
WP_011214997.1\|922811_925199_-	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	6.3e-176	38.3
WP_011214996.1\|925423_926422_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_011214995.1\|926650_928354_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_011214994.1\|928525_930229_-	sulfate permease	A0A2H4J153	uncultured_Caudovirales_phage	2.5e-41	26.5
WP_011214993.1\|930381_931752_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	5.7e-113	49.9
WP_011214992.1\|931748_933398_+	L-aspartate oxidase	NA	NA	NA	NA
WP_011214991.1\|933473_934817_+	quinolinate synthase NadA	NA	NA	NA	NA
WP_010946534.1\|934992_935379_-	DUF3757 domain-containing protein	NA	NA	NA	NA
WP_080020509.1\|935764_937024_-	MFS transporter	NA	NA	NA	NA
WP_014326780.1\|937177_937885_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_011214988.1\|938083_939460_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_011214987.1\|939556_940999_-	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	7.1e-74	40.4
WP_080020508.1\|940995_942171_-	DUF1574 domain-containing protein	NA	NA	NA	NA
WP_080020507.1\|942378_943680_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_010946522.1\|943666_944620_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_011214984.1\|944701_945439_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_011214983.1\|945442_946444_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_011214982.1\|946662_948645_+	acyltransferase family protein	A0A1R3Y5Q6	Salmonella_virus	1.4e-48	31.8
WP_010946518.1\|948770_949019_-	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	3.0e-12	70.6
WP_011214981.1\|949524_950232_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_011214980.1\|950463_951483_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_011214979.1\|951476_952370_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_011214978.1\|952538_953612_-	acyltransferase	NA	NA	NA	NA
WP_011214977.1\|953734_954892_-	hypothetical protein	NA	NA	NA	NA
WP_011214976.1\|954897_956322_-	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	4.2e-10	27.1
WP_010946509.1\|956318_957170_-	ABC transporter	NA	NA	NA	NA
WP_080020506.1\|957135_958830_-	hypothetical protein	NA	NA	NA	NA
WP_011214974.1\|959146_960667_-	hypothetical protein	NA	NA	NA	NA
WP_011214973.1\|960868_961588_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011214972.1\|961600_962692_+\|coat	spore coat protein	NA	NA	NA	NA
WP_080020505.1\|962645_963683_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_011214970.1\|963693_964821_+	hypothetical protein	NA	NA	NA	NA
WP_011214969.1\|965710_966739_-	radical SAM protein	NA	NA	NA	NA
WP_011214968.1\|966772_968056_-	hypothetical protein	NA	NA	NA	NA
WP_011214967.1\|968381_969410_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_155118629.1\|970039_971147_+\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1259374 : 1306205

Acinetobacter_phage(10.0%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148264547.1\|1259374_1260549_-\|transposase	IS3-like element ISLpn7 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.3e-61	43.3
WP_011214767.1\|1261507_1263202_-	sodium:proton antiporter	NA	NA	NA	NA
WP_011214766.1\|1263355_1264291_+	universal stress protein	NA	NA	NA	NA
WP_011214765.1\|1264333_1267024_+	cation-transporting P-type ATPase	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.1e-80	28.9
WP_011214764.1\|1267142_1267415_+\|transposase	IS5/IS1182 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.1e-11	40.0
WP_011214763.1\|1267442_1267922_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011214762.1\|1267913_1268249_-	endonuclease domain-containing protein	NA	NA	NA	NA
WP_011214761.1\|1268447_1268915_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011214760.1\|1268911_1269520_+	AAA family ATPase	NA	NA	NA	NA
WP_080020465.1\|1269473_1270244_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_129904874.1\|1270227_1270452_+	hypothetical protein	NA	NA	NA	NA
WP_011214758.1\|1270515_1271364_+	lpg0518 family Dot/Icm T4SS effector	NA	NA	NA	NA
WP_011214757.1\|1271672_1272503_+	aldo/keto reductase	NA	NA	NA	NA
WP_011214755.1\|1273340_1274273_-	Dot/Icm T4SS effector LegD2	NA	NA	NA	NA
WP_011214754.1\|1274610_1274874_-	hypothetical protein	NA	NA	NA	NA
WP_011214753.1\|1275043_1276087_-	GNAT family N-acetyltransferase	A0A2K5B2B6	Erysipelothrix_phage	1.6e-11	31.9
WP_011214752.1\|1276345_1277626_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.0e-95	46.2
WP_011214751.1\|1277647_1278052_-	fluoride efflux transporter CrcB	NA	NA	NA	NA
WP_011214750.1\|1278055_1278826_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_011214749.1\|1278822_1279275_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_011214748.1\|1279392_1280412_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_010946255.1\|1280425_1280926_-	OmpH family outer membrane protein	NA	NA	NA	NA
WP_080020464.1\|1281040_1283401_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_011214746.1\|1283523_1284951_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_011214745.1\|1284908_1285706_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_011214744.1\|1285716_1286433_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	2.7e-21	37.3
WP_011214743.1\|1286782_1288054_+	hypothetical protein	NA	NA	NA	NA
WP_011214742.1\|1288131_1288428_+	hypothetical protein	NA	NA	NA	NA
WP_011214741.1\|1288530_1290075_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_011214740.1\|1290061_1291204_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_010946247.1\|1291284_1292622_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	7.7e-22	27.4
WP_011214739.1\|1292694_1293810_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011214738.1\|1293983_1295459_+	adenosine deaminase	NA	NA	NA	NA
WP_011214737.1\|1295548_1296664_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_072401670.1\|1296666_1297992_-	argininosuccinate lyase	NA	NA	NA	NA
WP_011214735.1\|1297894_1299112_-	argininosuccinate synthase	NA	NA	NA	NA
WP_011214734.1\|1299108_1299777_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-25	37.6
WP_080020463.1\|1299760_1300426_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_011214732.1\|1300404_1301139_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011214731.1\|1301268_1301727_+	arginine repressor ArgR	NA	NA	NA	NA
WP_011214730.1\|1301926_1302496_-	cupin	NA	NA	NA	NA
WP_011214729.1\|1302715_1304011_-	adenylosuccinate synthase	A0A285PX35	Cedratvirus	4.2e-73	34.7
WP_080020462.1\|1304145_1305066_-\|protease	protease modulator HflC	R4VJU7	Alteromonas_phage	2.3e-09	29.6
WP_011214727.1\|1305062_1306205_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA

DBSCAN-SWA_5

1606362 : 1664792

Wolbachia_phage(50.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011214509.1\|1606362_1607205_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_011214508.1\|1608303_1609278_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_011214507.1\|1609434_1610667_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_011214506.1\|1610663_1611812_-	MFS transporter	NA	NA	NA	NA
WP_011214505.1\|1611808_1613251_-	FAD-binding protein	NA	NA	NA	NA
WP_011214504.1\|1613247_1614084_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_080020421.1\|1614073_1615153_-	L-tyrosine/L-tryptophan isonitrile synthase family protein	NA	NA	NA	NA
WP_011214502.1\|1615233_1616094_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011214501.1\|1616474_1617041_+	F-box protein	NA	NA	NA	NA
WP_011214500.1\|1617306_1618062_+	ABC transporter permease	NA	NA	NA	NA
WP_080020420.1\|1618030_1618816_+	MCE family protein	NA	NA	NA	NA
WP_011214498.1\|1618812_1619538_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_011214497.1\|1619638_1620049_+	peptide chain release factor-like protein	NA	NA	NA	NA
WP_011214496.1\|1620315_1621200_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_011214495.1\|1621354_1621810_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_011214494.1\|1621891_1622665_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_011214493.1\|1623164_1623881_-	porin family protein	NA	NA	NA	NA
WP_011214492.1\|1624369_1624789_+	YjbQ family protein	NA	NA	NA	NA
WP_011214491.1\|1624917_1625895_-	hypothetical protein	NA	NA	NA	NA
WP_011214490.1\|1626206_1626686_+	hypothetical protein	NA	NA	NA	NA
WP_011214489.1\|1626860_1627073_+	ParD-like family protein	NA	NA	NA	NA
WP_080020419.1\|1627041_1627815_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_080020418.1\|1627877_1629008_+	EAL domain-containing protein	NA	NA	NA	NA
WP_011214486.1\|1629031_1629910_+	diguanylate cyclase	NA	NA	NA	NA
WP_011214484.1\|1631222_1633589_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_011214483.1\|1633582_1634293_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-33	37.7
WP_080020417.1\|1634764_1635652_-	hypothetical protein	NA	NA	NA	NA
WP_011214481.1\|1635771_1637208_-	hypothetical protein	NA	NA	NA	NA
WP_070322478.1\|1637198_1637414_+	hypothetical protein	NA	NA	NA	NA
WP_011214479.1\|1637605_1638694_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_011214478.1\|1638695_1639490_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_011214477.1\|1639874_1640189_+	hypothetical protein	NA	NA	NA	NA
WP_011214476.1\|1640403_1640628_+	hypothetical protein	NA	NA	NA	NA
WP_011214475.1\|1641076_1641592_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_041173710.1\|1641922_1642807_-	hypothetical protein	NA	NA	NA	NA
WP_011214473.1\|1642953_1644057_-	nucleoside hydrolase	NA	NA	NA	NA
WP_011214472.1\|1644444_1644693_+	hypothetical protein	NA	NA	NA	NA
WP_011214471.1\|1645942_1646890_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_129827387.1\|1646879_1647170_-	hypothetical protein	NA	NA	NA	NA
WP_148264545.1\|1647601_1648776_-\|transposase	IS3-like element ISLpn7 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.3e-61	43.3
WP_011214461.1\|1649679_1651098_-\|transposase	IS4-like element ISLpn2 family transposase	Q9JMP3	Wolbachia_phage	5.6e-55	32.5
WP_105625135.1\|1651554_1652421_-	virulence protein RhuM/Fic/DOC family protein	Q9JMN3	Wolbachia_phage	2.0e-18	44.0
WP_041173706.1\|1652841_1653336_+	hypothetical protein	NA	NA	NA	NA
WP_011214466.1\|1653422_1654844_-\|transposase	transposase	NA	NA	NA	NA
WP_011214463.1\|1655956_1658188_-	hypothetical protein	NA	NA	NA	NA
WP_080020416.1\|1658350_1659331_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA
WP_129827406.1\|1662048_1663223_-\|transposase	IS3-like element ISLpn7 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.3e-61	43.3
WP_011214461.1\|1663373_1664792_-\|transposase	IS4-like element ISLpn2 family transposase	Q9JMP3	Wolbachia_phage	5.6e-55	32.5

DBSCAN-SWA_6

2634395 : 2641796

Pseudomonas_phage(33.33%)

integrase,tRNA

attL 2632764:2632778|attR 2650462:2650476

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2632764:2632778	attL	NA	NA	NA	NA
WP_058450423.1\|2634395_2634764_+	hypothetical protein	A0A059VFY6	Pseudomonas_phage	7.3e-15	37.8
WP_070322496.1\|2634814_2635750_+\|integrase	site-specific integrase	A0A059VF45	Pseudomonas_phage	8.2e-71	47.1
WP_010948067.1\|2636007_2637879_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.3e-35	32.8
WP_080020730.1\|2637959_2639708_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.8e-58	35.2
WP_011216250.1\|2639704_2640148_-	lpg2359 family Dot/Icm T4SS effector	A0A292GL36	Xanthomonas_phage	8.2e-21	43.2
WP_010948064.1\|2640350_2640590_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_011216249.1\|2640794_2641796_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	9.0e-92	51.0
2650462:2650476	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2994040 : 3004162

Micromonas_pusilla_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011215985.1\|2994040_2995975_+	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	1.3e-147	49.6
WP_011215984.1\|2996163_2997303_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	2.0e-23	26.4
WP_080020679.1\|2997385_2998510_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	1.3e-51	35.4
WP_011215982.1\|2998718_2999867_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.2e-126	58.5
WP_011215981.1\|2999885_3001211_+	adenosylhomocysteinase	S4VPF6	Pandoravirus	4.7e-48	31.4
WP_080020678.1\|3001328_3002342_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_011215979.1\|3002473_3004162_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	1.0e-15	30.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016874

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection