CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017639	Corynebacterium sp. NML98-0116 chromosome	5 crisprs	cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG,DEDDh,PrimPol,cas4,WYL,csa3	0	17	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017639_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017639_1

18554-18693

TypeI-E

Consensus_repeat	Method
CCTGGCCGACCCCCGACCTGGGCTTTTATCGACGCCGCTTCCCAAAA	CRISPRCasFinder

1 spacers

cas2,cas1,cas6e,cas5

The CRISPR arrays of NZ_CP017639_1

>merge|NZ_CP017639|1|18554-18693|CRISPRCasFinder
CCTGGCCGACCCCCGACCTGGGCTTTTATCGACGCCGCTTCCCAAAACAGGGAATTTGGTGTCAGTCCGTGCTTGGTGTGCACCACATTCCTACCTGGCCGACCCCCAACCTGGGCTTTTATCGACGCCGCTTCCCAAAA

>NZ_CP017639|1|1|18554-18693|CRISPRCasFinder
CCTGGCCGACCCCCGACCTGGGCTTTTATCGACGCCGCTTCCCAAAA	CAGGGAATTTGGTGTCAGTCCGTGCTTGGTGTGCACCACATTCCTA
CCTGGCCGACCCCCAACCTGGGCTTTTATCGACGCCGCTTCCCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017639.1\|WP_070363398.1\|22429_24010_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP017639.1\|WP_070361622.1\|6959_8459_-\|anthranilate-synthase-component-1	unknown	unknown	gnl\|CDD\|237428
NZ_CP017639.1\|WP_070361625.1\|11138_12017_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP017639.1\|WP_070361628.1\|14401_15631_-\|DUF4032-domain-containing-protein	unknown	unknown	gnl\|CDD\|379077
NZ_CP017639.1\|WP_070361635.1\|25799_26738_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP017639.1\|WP_070361632.1\|20836_21820_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361636.1\|26739_27453_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP017639.1\|WP_070363399.1\|21950_22385_+\|DUF2871-domain-containing-protein	unknown	unknown	gnl\|CDD\|378551
NZ_CP017639.1\|WP_070361633.1\|24162_25167_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361637.1\|27449_28172_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP017639.1\|WP_070361629.1\|17162_18257_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238562
NZ_CP017639.1\|WP_070361626.1\|12020_12866_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP017639.1\|WP_070363397.1\|15640_16765_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP017639.1\|WP_070361631.1\|19532_20672_-\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|223358
NZ_CP017639.1\|WP_070361627.1\|12948_14277_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP017639.1\|WP_070361623.1\|9256_10471_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP017639.1\|WP_070363396.1\|8708_9185_-\|SdpI-family-protein	unknown	unknown	gnl\|CDD\|379303
NZ_CP017639.1\|WP_070361624.1\|10460_11129_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361634.1\|25446_25803_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_CP017639.1\|WP_070361630.1\|19104_19536_-\|DUF488-domain-containing-protein	unknown	unknown	gnl\|CDD\|377317

Protein	Function_ID	Function_description	E-value
NZ_CP017639.1\|WP_070363398.1\|22429_24010_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.42311e-60
NZ_CP017639.1\|WP_070361622.1\|6959_8459_-\|anthranilate-synthase-component-1	gnl\|CDD\|237428	PRK13564, PRK13564, anthranilate synthase component 1.	0
NZ_CP017639.1\|WP_070361625.1\|11138_12017_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.79409e-67
NZ_CP017639.1\|WP_070361628.1\|14401_15631_-\|DUF4032-domain-containing-protein	gnl\|CDD\|379077	pfam13224, DUF4032, Domain of unknown function (DUF4032). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 170 amino acids in length. The family is found in association with pfam06293.	4.8663e-71
NZ_CP017639.1\|WP_070361635.1\|25799_26738_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.5174e-123
NZ_CP017639.1\|WP_070361637.1\|27449_28172_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.64697e-44
NZ_CP017639.1\|WP_070363399.1\|21950_22385_+\|DUF2871-domain-containing-protein	gnl\|CDD\|378551	pfam11070, DUF2871, Protein of unknown function (DUF2871). This family of proteins has no known function.	6.94819e-48
NZ_CP017639.1\|WP_070361629.1\|17162_18257_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	2.44195e-64
NZ_CP017639.1\|WP_070361626.1\|12020_12866_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.49279e-57
NZ_CP017639.1\|WP_070363397.1\|15640_16765_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	1.95017e-179
NZ_CP017639.1\|WP_070361636.1\|26739_27453_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	6.63927e-77
NZ_CP017639.1\|WP_070361627.1\|12948_14277_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	2.71368e-29
NZ_CP017639.1\|WP_070361623.1\|9256_10471_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	1.75001e-76
NZ_CP017639.1\|WP_070363396.1\|8708_9185_-\|SdpI-family-protein	gnl\|CDD\|379303	pfam13630, SdpI, SdpI/YfhL protein family. This family of proteins includes the SdpI and YfhL proteins from B. subtilis. The SdpI protein is a multipass integral membrane protein that protects toxin-producing cells from being killed. Killing is mediated by the exported toxic protein SdpC an extracellular protein that induces the synthesis of an immunity protein.	6.45985e-13
NZ_CP017639.1\|WP_070361631.1\|19532_20672_-\|NADP-dependent-malic-enzyme	gnl\|CDD\|223358	COG0281, SfcA, Malic enzyme [Energy production and conversion].	1.1789e-168
NZ_CP017639.1\|WP_070361634.1\|25446_25803_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	2.0069e-41
NZ_CP017639.1\|WP_070361630.1\|19104_19536_-\|DUF488-domain-containing-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	2.58453e-17

>NZ_CP017639.1|WP_070361629.1|17162_18257_-|ABC-transporter-substrate-binding-protein
MRHHAVAATLLTATLLVTGCTAENSAENSAENTAEETTQTTQEDTTRLLTDIDGTDVRVPKQVTRLADTWDVNNQFVLMLGGGDTLVATTEEAKRLPWLTKIYPHVTELPTPASGTRLNVEELKEINPEMLLTSSKEQVEAARAQGIPAARVDFDDFEQLMKSVRITANALGTEEADQKATEYVTYMERNLKMVADRLGGMPGEKKPKVLHIVGGEDVTQADGPDSLVGEWVAATGARNVIEEVVDVTTVTPQDIVDAAPDFIIVGGMEAQLGVDKLVNDPALANVPAVKQGNVVKNPVGTSNWGRYSAEEALQLLWAAKLFHPEKFEDVDLVAETQQFYSTFYGYELSTEDAQRILDGEGPAA
>NZ_CP017639.1|WP_070363397.1|15640_16765_-|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MASVTYDNATRIYPGATTPSVDKLNLEIADGEFLVLVGPSGSGKSTALRMLAGLEDTNEGHIRIGDRDVTHVSPKDRDIAMVFQNYALYPHMTVRENMGFALKIAGMDKAEIDKRVEEAAKTLDLTQYLDRKPKALSGGQRQRVAMGRAIVRKPQVFLMDEPLSNLDAKLRVQTRTQIANLQRRMGVTTLYVTHDQTEALTMGDRIAVLNFGVLQQVGTPRELYDHPNNVFVAGFIGSPAMNLSTFDVDLNEKVAKLGRASIPLSDEHISHLTVEDDGQVILGFRPESLQVVDETAKHSIPVEIDFVEELGSDSYLYGHLAGGGWKEEGLEEETSGQIVVRTAPLSGVMKGDVVHVQIVDGGLHVFSKATGQRI
>NZ_CP017639.1|WP_070361628.1|14401_15631_-|DUF4032-domain-containing-protein
MREKLSVVSPVYAPTLLKMPWAQPLEDWSSDLLAALPRGISRHTVRLIEADGLVFAVKEIGGEVAYHEYNMLRRLQELDAPCVVPVAVITHRVDENGEELTPCLVTEHLRFSLPYRDVFSRDITVDTINKLVRALAVLLVRLHLLHFYWGDVSLSNTLFRRDADQFSAYLVDAETGEFHDPISDGRRLYDVDVARVNIIGEMMDLQAGGYLREDVDVITLGNDIASTYNELWDLMTGELIVEGDAFGAIAGRVAKINELGFDVGEVEIEHDGEDTYRVIIEPAVFSTGFYQKKLLRLTGLEVQDRQAQRLLGEMEVYRAVRYGGKLPLEAVAHRWMVKNYEPIVELIPPQLREKLEPAQIFHEILDHRWFMSQNDQRYVTLAEAAQSYFDHVLPGHPDEAIVYKLPPEM
>NZ_CP017639.1|WP_070361627.1|12948_14277_-|ABC-transporter-substrate-binding-protein
MKKFTRAFASTAVAALAASALVACGGGGDTEGPNVYFLNFKPEQDATYQAIAEEYTAETGVPVKVVTAASGNYEQTLRTEVGKSDAPTLFQMNGPTGFKTWKDYTADLSDFSLAQDLNEDVTPLTAEDGTVRGIPFAVEGFGIIYNEEITDKYFALPNPAVASMDEVKNFESLKKLAEDMQSKKDELGIDGTFASTSLTSGEDWRWQTHLANGPMHFEFEDLGTTDAEDVTFKYNKEFKNLFDLYLNNSTIAPTLAPSKAVSDSMAEFALGQAAFVQNGNWAWSQIADVNGNVVKEDKIKFLPMYMGLPDEEKTGINVGTENYLAINAKAPEEDQQATKDFLNWLFTSEAGKKHVIEDLGFIAPFKNYTETDVPADPLARQVQEAISNTELTTLPWDFQFFPSQQFKDDFGGNLAQYASGNMEWADVVAKFSEDWKAEKGSN
>NZ_CP017639.1|WP_070361626.1|12020_12866_-|sugar-ABC-transporter-permease
MQQSLKKYFPIFVLPTLLAFLIAFLAPFVIGFLLSFTSFHTITDATWVGVDNYVQAFQAREGFVRAFGFTALVSIVSIITVNVFAFAIAWTLTRKLKGTNFFRTVFFMPNLIGGIVLGYTWQSMINAVLAQYGTTIVSDWKYGYLGLVILINWQLVGYMMIIYIAGLQNVPPELIEAAELDGVSKWEMLRHVTIPMIMPSITICLFLTLSNTFKLFDQNLALTNGAPGGATEMVALNIVNTMFLRNNVEGVGQAKAVIFVVVVVVIAMFQLRATRSKEVEA
>NZ_CP017639.1|WP_070361625.1|11138_12017_-|carbohydrate-ABC-transporter-permease
MATKTKAPVTASEASVSGPAKVLIYAVLVFLTVVFLGPIVFIFLNSFKQKFAISNNPFAIPLGDMWAGFENYITGIQGEGFAWAIVWSFTITILSVASIVFFSSMTAYYITRVKTWWTSTLYYLFVFSMVIPFQMVMFPTVTIADRLGLANPLGMVVLYTGFGAGLSVFMFAGFVKSIPLEIEEAATIDGCSPLQTFFRVVLPMLKPTAVTVAILNAMWVWNDYLLPYLVIGLSTPYRTIPVVIQQFVGSQGNRDMGAMMAMLVLAIVPIIIFYMSSQKHIVEGVAAGAVKG
>NZ_CP017639.1|WP_070361624.1|10460_11129_-|hypothetical-protein
MSLFNPDSRFMSAFTLMADIVIVNMLFVLSSLPIVTGGMAIRAANVVTGYMVEGRGSRYGLHYLREFRYGGGKFGGASTQWWGILVAIALGVIYQQWVIFQAGIDGHLLNLTQGLTLSGILIIAGISVWFFALQAQLDLQATSEGQQKAPLGETLGRSVILTFQQLPRTLGALLCIGAAASLPLWTSVAVWIPAYFFLVPALTLFLVQLLVAAPLGRGLASD
>NZ_CP017639.1|WP_070361623.1|9256_10471_+|dicarboxylate/amino-acid:cation-symporter
MKSKVLSSLLFWIVVAIVAGFLCSFFFPDWLARVFVTFNGLFSNFLGFFVPILIFSLIAPAIAGLGKGAGKWLGITAGVAYGSTIISGLIAWGGASALYPTLLAGTQLRTDIDDPSEGGLSPFFEVEMPAPFEVMSALLLAFVIGIAMTTVKSRTMHEVLNELRDVIMKVVQSFVIPLLPLFIFGTFLNLAMNENFGSTMAAFGVVLLLSVGMTIVIVLGQYLIAGAVAGQNPFTALKNMLPAYFTALGTSSSAATIPVTYQSTLKNKVDENVAGFIVPLCATIHLSGSMMKITLYALAIVFMAQLPITGGAVVGFVLLLGIMMIAAPGVPGGAIMAAVGLLQANLGFDESMISLMIAAYIVVDSFGTAANVTGDGAIAMIVNRFAKGKIVTQDMERAKEVTSR
>NZ_CP017639.1|WP_070363396.1|8708_9185_-|SdpI-family-protein
MLLAQSPNGPFSDTSSINTIIGILLIVFTVALLIPGVLATAGKLPGNGVIGLRVPEVRKHESTWRQAHRVTGPFWVLAAVAFAIGAAFAFIAYGWMWILVAVAVVAGFVSISVGGNFGARAAALVDAALDASDSDSSDEPAVDLGALRKAAGKADEQQ
>NZ_CP017639.1|WP_070361622.1|6959_8459_-|anthranilate-synthase-component-1
MSTHTTRRVKYHADAASLFAHLGGTTTRDTVLLESADITTRSGIQSVAVLRAAVRATCSGSRVHVEPLTAFGRTVADQLREQLGEYHVGENVYAFPPVAAAVVADERERLTATSTVEVLRALSRFGFLAGGFAYDYLETFEALPAVADGANTYPDYQFVLAEVLLRIDHQAQTATLSGVGIDALAERIDAASPPPLRSSAGPGGTLVARADIPDAQFCADVERLKEHIYNGDIYQVVPARSFIADCPDAFAAYLQLRATNPSPYMFYQRGVDKHGDSFELFGASPESNLKYTNADREVQLYPIAGTRPRGLAEDGTVDHELDTRMELQLRTDAKEVAEHTMLVDLARNDVARVAEPGTRRVAELLQVDRYSRVMHLVSRVTARLAGDLDALDAYRACMNMGTLTGAPKLRATSLIRSLEGARRGSYGGAVGYLDSNGDFDTCIVIRSAYVTGGKAIVQAGAGVVRDSNPQSEADETLHKAYAVLNAIALAAGAELEVIK
>NZ_CP017639.1|WP_070361630.1|19104_19536_-|DUF488-domain-containing-protein
MRLYTLGFSHKRAEEFFTILRDNNISRVVDIRRSNTNQLAGFTKMHDLEYFLRTILDMPYLHELTLASSHELMHAYRHNEIPFDKFAAALRAEYDERHAADLDRDTFSDVVLLCSEADPSTCHRIVAANYLAEHWDNVEVIHL
>NZ_CP017639.1|WP_070361631.1|19532_20672_-|NADP-dependent-malic-enzyme
MQEQPTTDEIFAAHEGGKLSIQSRMEVNTMRDLAICYTPGVAEVCEAIAQEPAKARHYTGAGNTVAVVTDGTAVLGLGDIGPLASLPVMEGKAQLFQQFAGLNSFPIVLDTQDVDEIVDTVVRIAPSFAAINLEDIAAPRCFDIERRLDERLNIPVMHDDQHGTAVVIYAALRNAARVLGRTLADLRVVISGAGAAGIACVDMLLDAGIHDIIVLDSQGPIHADRAGLTPVKQSLAARTNPRNIHTTVDDALRDADTFIGLSRGHITEEQVLLMAEAPILFSLANPTPEIEPEVARKHGGVVATGRSDMPNQINNVLAFPGIFRGAIDAGATRITRPMLLAASEAIASLIDAPTAHNIVPQALDPRVAPAVAKAVADAV
>NZ_CP017639.1|WP_070361632.1|20836_21820_+|hypothetical-protein
MQRATKLGAVALAATLALAGAAAPNAAADLSSVRYTAGVVVNQGDVVEVGITKCQVGYVDAASKTAYVARHCFSQDAGEILYKKSQAVGYSTRAGLIDARFKNDDVMAVRLYEDIIAGQNLFSGDAIADYDSLEADMEVCANSVKQRKVVCGHIQGAGDGVIKVEADETFIQGDSGGPAWLVDDSGNPLSFVGVISQTSSTETPQGKPWYEWKLTSVTAKSCRASTEVPSYTRTQPESCGIHDDAPGLLAPETRTRPPGQPWMKRVANEFEVLSSKIKAGEPLSRQQEDMVLGLTLSIVIGVSGLGLYAAYLLGEPVIARFVDGLKR
>NZ_CP017639.1|WP_070363399.1|21950_22385_+|DUF2871-domain-containing-protein
MQKLYRAAVLYLVLGLGAGLFYREFTRANDFPEGQFTQLGVTHTHLLVLGFVMSLIFLVLEKLFRVSRSGKLFTWFFWVYNVGVLMTSGMMVWHGILTVQGKESTAMIAGIAGLGHIAITIALGLFMAALGRALKPVEQESVRR
>NZ_CP017639.1|WP_070363398.1|22429_24010_+|MFS-transporter
MSLAVLSVGLGVIVLDGTIVGVALPSIITDLGLDLTQAQWVNSLYAVLLAALLLSTGKIADSWGRKRAFLAGLGVFVAGSVLAGFSTSASTLISARAVQAVGAALIMPSTLSTVNAVFRGKYRAAAFGVWGAVISGAAAVGPLAGGALTQWVSWHWIFLVNVPIGMLVAIGAVLTVRETRSPDKLPGIDVDGAQLSAIAFGTLVFAIIEAPDLGWWTPKEPLTVFGWTWSTTAPVSPVPVSLAISAVAFALFIRWEQHRKRVERSALLDLGLFSYSTFSWGNITAGAVAIGEFAIIFILPLYLINALGLSVMSAGLVLAAMAVGAFLSGAAARHVAARFGAPGTVLIGLALEVVGVIILASVMGANTSGWLIAAPLTLYGLGLGLASAQLTGTVLRDIPVQRSGQGSATQSTVRQIGSALGTAVSGSVCSMALAITLPKTLTAAGITGPLADATSSTTRQSAGSAITQLRMEGTASAFGDQTAAVVQALSEGMADAARWSLLAATAFLALGFVGALQVRRAAKAGA
>NZ_CP017639.1|WP_070361633.1|24162_25167_-|hypothetical-protein
MNTLYNGMTIDLDTPLIHQKQRTPNHAYQQVSVRRYLQNEHCLQPWQVQNNARYHPKNVRYHAPAAVRAIAHAVEQPGSIIAGFSALALYGLPYLVEGADTTLVTTSGHTSVAGACRPTIRRSRISLATWTVTHRGVSLQAVTPLTAVIQALVQVKRGEHLWRTVTVEGLAPEEVRGIQLVDCVRRFWGITPSSIAKAARHKIDATWLHKVLRHSSVLADSPKETEMRLLVAALANRYGCTVEEQVPLRVGDQLVTVFDLAIPELKIAVMYDGAHHSDYQQRNKDSSITLKMIRQGWTPARCSAATMFECLTLIEELMQEGRVRVQTRKVPNGF
>NZ_CP017639.1|WP_070361634.1|25446_25803_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MMVLIVTACPAGLRGDLTKWLMELSPGVFVGTPSARIRDLLWDRTIELCKDGRALLVYSSNNEQGMEFREHRHAWKPTDFDGITLMMRENARAPKRRTGWSKARRQRIAYERDRRTSS
>NZ_CP017639.1|WP_070361635.1|25799_26738_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MPTPDELPITRRALARMSDRLSFLYAERCVVNRDGNALTITDQRGTAHVPATQLAVLLLGPGTRITYAAMALLGDAGTSTVWVGERGVRYYASGRPPAKSSRMALLQAEVVTHQRKRLDCARKMYSLRFPGEDVSTLTMAQLRGREGSRMKRVYAAEAERTGVYWDRRSYDPHDFDSGTPINQALTAASAALYGIAHAVIAGLGFVPALGVVHTGTDRAFVYDIADLYKAEIAIPAAFDAVAEAKGKPHIEVRRKVRDAVVEKRLMQRMVKDLQYVMDVPEEELYSDVELMLWSELEVISAGVNWAEEEALQ
>NZ_CP017639.1|WP_070361636.1|26739_27453_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MSNTFTRILINPARRQGRRLLTDSQAMHAAVRSAFPPDLDETAGRVLWRVDSQEHTHVLYIVGPGKPTADSIVEQAGWDTRPAKIADYSRFLDSIMKGQRWKFELVANPTYSEFQQGKRGKIKAHVSPRHQLAWLRKKSLAHGFALAPGLDDEVNDEERAHWDAFEAPAVIQSWTDVFHRKKADGTKGRPVRIAKARFSGVLEVTDVEAFRRTLTQGIGRGRGYGCGLLTLAPSNRC
>NZ_CP017639.1|WP_070361637.1|27449_28172_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSSSLLLLLKGPLQSWGDESRHKIRATALTPTKSGIIGLIAAAQGRRRTDPVEDLTRLRLGVRVDQSGSLLRDYQTAQPWLTDPNASAELITRYFLSDAAFVVAVESDDRALLEGIAEALRAPAFPLFMGRRSCPVHPGLVIGIVDTDAETALREHPTWHATAQHKREAPKHVNLALYRDADEEEQGGVRRQDVPISFDPQHRRYGWRDVLRVEDVAIDNPDGTESLVDSDVFFETVIKA

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Crispr_ID: NZ_CP017639_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017639_2

34769-38761

TypeI-E

I-E

Consensus_repeat	Method
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CRISPRCasFinder
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CRT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	PILER-CR

65 spacers

cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

The CRISPR arrays of NZ_CP017639_2

>merge|NZ_CP017639|2|34769-38761|CRISPRCasFinder,CRT,PILER-CR
GTCCTCCCCGCGCTCGCGGGGATGAGCCCGGCGTGAAAAGCGCGACCAGTTGTTCTGGGAGGTCCTCCCCGCGCTCGCGGGGATGAGCCCACTTTCGCCACCATCGACTGTGAGGGGTACGCGTCCTCCCCGCGCTCGCGGGGATGAGCCCGTCTCGCCAAATCTGCTCATCGACACCCGTCGGTCCTCCCCGCGCTCGCGGGGATGAGCCCCAACCAGGGTTTTGCAACTTCCAATATTCCGCGTCCTCCCCGCGCTCGCGGGGATGAGCCCCGTCTCGATTCGATTGACCAGGCGACCGCGAAGTCCTCCCCGCGCTCGCGGGGATGAGCCCGGCGTTGTCCGCCTTGTGCGTAATGACACCGCGTCCTCCCCGCGCTCGCGGGGATGAGCCCCTAGTAACATAGAATACTAGGTGTAAGGCAAGGTCCTCCCCGCGCTCGCGGGGATGAGCCGCAAAGGAGCTAATCAATGAGTAAGGAACTCGAGTCCTCCCCGCGCTCGCGGGGATGAGCCCAAAACCCCCGCGCAAAATGCATCACATACCCCGTCCTCCCCGCGCTCGCGGGGATGAGCCCACACCCTGGGCGGCGTTGTGGTCAATGATGGTGTCCTCCCCGCGCTCGCGGGGATGAGCCCGATTCGAAGGGCTTCTCGTAGGTCGTGGTCGAGTCCTCCCCGCGCTCGCGGGGATGAGCCACCGTGAGGCAGTCCGAATCGGCGTGCATTCGCGTCCTCCCCGCGCTCGCGGGGATGAGCCCGCGACCTTGACGTGTGGTGGAGCAAGCTGCCAGTCCTCCCCGCGCTCGCGGGGATGAGCCGTAGGTGTCAGTCCAGTCGAGGCCCATCACCATGTCCTCCCCGCGCTCGCGGGGATGAGCCCGGCACTGACTCCACCCCGCAAATGCGGACCGCGTCCTCCCCGCGCTCGCGGGGATGAGCCGGTATCCTTCCAGGAATTCTCCGACGTGATGGAGTCCTCCCCGCGCTCGCGGGGATGAGCCCGGTGACAACTTTCATTGCTCGCATGGTGGCGAGTCCTCCCCGCGCTCGCGGGGATGAGCCCCTATCCACCAAGAAGATGAAGTCGGTCGCGCCGTCCTCCCCGCGCTCGCGGGGATGAGCCCCAGGGGTCGGCGCAGGGGCTGACCCGCAATGTGTCCTCCCCGCGCTCGCGGGGATGAGCCGGCGGCAAGCGCCGCCGAATCGTACTCCCCCAAGTCCTCCCCGCGCTCGCGGGGATGAGCCGCGCCGACCATCAAAGTCGGCACAGACGGGGTGGTCCTCCCCGCGCTCGCGGGGATGAGCCGTCGGCCAAAAACTTTCGCGTCGCCTCGTGCTCGTCCTCCCCGCGCTCGCGGGGATGAGCCCTTTATATGTAAGCAAGGACCGAAAGGGTCCATGTCCTCCCCGCGCTCGCGGGGATGAGCCTTCTGGTTTTCCCTCGCATGGTGGACGCACATTGTCCTCCCCGCGCTCGCGGGGATGAGCCCCCCTGATTCGTCCGGCTTAAACGGATCCCCAAGTCCTCCCCGCGCTCGCGGGGATGAGCCCACCGGCTTCACATATTTTCGCCCAGGCCCTACGTCCTCCCCGCGCTCGCGGGGATGAGCCCCACTTGCGCAGGATGCGCCCATAATTCTGTCTGTCCTCCCCGCGCTCGCGGGGATGAGCCCGCACAACCTCCACACAGTTCGGGTCGGGGTGTGTCCTCCCCGCGCTCGCGGGGATGAGCCCTCATGTGTGACGGGGTGAAGATCGCCGACCGGGTCCTCCCCGCGCTCGCGGGGATGAGCCCGGAATGAACTCCGAAACGACGTTTACGTTCCCGTCCTCCCCGCGTTCGCGGGGATGAGCCCGTTGTTTGTAGGTTGGTCACGTCGGCGATCGCGTCCTCCCCGCGCTCGCGGGGATGAGCCTAAGCGCTGGGTTGATGCCCAACTCGCAGAAAAGTCCTCCCCGCGCTCGCGGGGATGAGCCGTTTGGCAAGCAGGTTTCTCATTGTTCTCTTTCGTCCTCCCCGCGCTCGCGGGGATGAGCCCAAAATCCTCAATTTCACGCTGCCTGCGCATCCGTCCTCCCCGCGCTCGCGGGGATGAGCCCCCGGACCCACACGAAACCATCCCCGATGTGAGGTCCTCCCCGCGCTCGCGGGGATGAGCCCTCAATTGCCTCGAACCCCAACGATGTTTCAGGGTCCTCCCCGCGCTCGCGGGGATGAGCCAACGCCTCAACCATGTCGCGCACCAAGTACTGGGTCCTCCCCGCGCTCGCGGGGATGAGCCTCTGCTCCGGCTTGCCGCTCTTGCGAGCCTTAGGTCCTCCCCGCGCTCGCGGGGATGAGCCCCAACAACGCGAACGCCGTGACTATCGGATTCGGTCCTCCCCGCGCTCGCGGGGATGAGCCCATTTCGTCTGACAGACGGTGAAACGCGTCGTCGTCCTCCCCGCGCTCGCGGGGATGAGCCGCTGCGGGGTCGCTGAACGTTCCGGGTGGCTTTGTCCTCCCCGCGCTCGCGGGGATGAGCCCATCTGGTGGAGTCCAAAACGAGGGTGCAGGCGGTTCTCCCCGCGCTCGCGGGGATGAGCCCAGCACCAGAACCCACGCGGAATGCGATTCAAAGTCCTCCCCGCGCTCGCGGGGATGAGCCTGCGAAACTGTCACTCAATTACCCCACCAGGTCGTCCTCCCCGCGCTCGCGGGGATGAGCCCGTCGCAGCCAGCTTCGTGGCCTTGTCAATCGCGTCCTCCCCGCGCTCGCGGGGAGGAGCCCACATGGAGGAAGCATGAAACCACACCCAGAAAGTCATCCCCGCGCTCGCGGGGATGAGCCCCACCCTGCTCGATATACACCCCACGATGAGAAGTCCTCCCCGCGCTCGCGGGGATGAGCCGGATTCACGCAATGAAAGTGCGTGCTGAGCACGGTCCTCCCCGCGCTCGCGGGGATGAGCCCATATCCGACGCGCGTTCAGTTGCAGGGGGGCTGTCCTCCCCGCGCTCGCGGGGATGAGCCCTCAATCGCCGCCGCATTCGACTTCTTCGTCTCGTCCTCCCCGCGCTCGCGGGGATGAGCCGGATTCACGCAATGAAAGTGCGTGCTGAGCACGGTCCTCCCCGCGCTCGCGGGGATGAGCCGGCCTACACCCTCGAGGAGGCTATCGCTGACCCGTCCTCCCCGCGCTCGCGGGGATGAGCCCAGGTCGTCGCGTGACCTGGCTGACCAGCTCAAGTCCTCCCCGCGCTCGCGGGGATGAGCCCGCCAGCGCAACGGCAACGTTTTCATTTCATGAGTCCTCCCCGCGCTCGCGGGGATGAGCCCAAAACAGTGTCCCTGTGGCTTAATGCAGAGCGGTCCTCCCCGCGCTCGCGGGGATGAGCCCGCGTCCAGTTCTGCGTCAGCCCCGGCCTTTTTGTCCTCCCCGCGCTCGCGGGGATGAGCCCTAATTGACAACAGCAACTAAAGCGTCTGCCAAGTCCTCCCCGCGCTCGCGGGGATGAGCCCAATAACTACGCGCCGGGTTCGGGTGATACGAAGTCCTCCCCGCGCTCGCGGGGATGAGCCGTTGTGCGGTTCCACCGTCGCGAAATTCGCTTTGTCCTCCCCGCGCTCGCGGGGATGAGCCGCGTCGTGCAGCTCTGAACACATGGATTGACCAGTCCTCCCCGCGCCTGCGGGGATGAGCCGGCGGCGTTTCCTGGCCGGTATGCCGAAAAGATGTCCTCCCCGCGCTCGCGGGGATGAGCCCGTCACCGGAATTGACGCATACCCAACAGCAGAGTCCTCCCCGCGCCTGCGGGGATGAGCCCATCAACCCCGCCCCGAACTGGTACCAGGTGCGGTCCTCCCCGCGCCTGCGGGGATGAGCCGCCCTCGCCGGTATCGAGTGGGCGGGCCCAAATATCCTCCCCGCGCCTGCGGGGATGAGCCTCTGGTCTGATGGGCGGTAGGGCTTAAGTTTCCGTCCTCCCCGCGCCTGCGGGGATGAGCC

>NZ_CP017639|2|2|34769-38761|CRISPRCasFinder
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGCGTGAAAAGCGCGACCAGTTGTTCTGGGAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CACTTTCGCCACCATCGACTGTGAGGGGTACGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGTCTCGCCAAATCTGCTCATCGACACCCGTCG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCAACCAGGGTTTTGCAACTTCCAATATTCCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCGTCTCGATTCGATTGACCAGGCGACCGCGAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGCGTTGTCCGCCTTGTGCGTAATGACACCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCTAGTAACATAGAATACTAGGTGTAAGGCAAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCAAAGGAGCTAATCAATGAGTAAGGAACTCGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAAAACCCCCGCGCAAAATGCATCACATACCCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CACACCCTGGGCGGCGTTGTGGTCAATGATGGT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGATTCGAAGGGCTTCTCGTAGGTCGTGGTCGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	ACCGTGAGGCAGTCCGAATCGGCGTGCATTCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCGACCTTGACGTGTGGTGGAGCAAGCTGCCA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTAGGTGTCAGTCCAGTCGAGGCCCATCACCAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGCACTGACTCCACCCCGCAAATGCGGACCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGTATCCTTCCAGGAATTCTCCGACGTGATGGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGTGACAACTTTCATTGCTCGCATGGTGGCGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCTATCCACCAAGAAGATGAAGTCGGTCGCGCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCAGGGGTCGGCGCAGGGGCTGACCCGCAATGT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGCGGCAAGCGCCGCCGAATCGTACTCCCCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCGCCGACCATCAAAGTCGGCACAGACGGGGTG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTCGGCCAAAAACTTTCGCGTCGCCTCGTGCTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTTTATATGTAAGCAAGGACCGAAAGGGTCCAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TTCTGGTTTTCCCTCGCATGGTGGACGCACATT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCCCTGATTCGTCCGGCTTAAACGGATCCCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CACCGGCTTCACATATTTTCGCCCAGGCCCTAC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCACTTGCGCAGGATGCGCCCATAATTCTGTCT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCACAACCTCCACACAGTTCGGGTCGGGGTGT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCATGTGTGACGGGGTGAAGATCGCCGACCGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGAATGAACTCCGAAACGACGTTTACGTTCCC
GTCCTCCCCGCGTTCGCGGGGATGAGCC	CGTTGTTTGTAGGTTGGTCACGTCGGCGATCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TAAGCGCTGGGTTGATGCCCAACTCGCAGAAAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTTTGGCAAGCAGGTTTCTCATTGTTCTCTTTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAAAATCCTCAATTTCACGCTGCCTGCGCATCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCCGGACCCACACGAAACCATCCCCGATGTGAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCAATTGCCTCGAACCCCAACGATGTTTCAGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	AACGCCTCAACCATGTCGCGCACCAAGTACTGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TCTGCTCCGGCTTGCCGCTCTTGCGAGCCTTAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCAACAACGCGAACGCCGTGACTATCGGATTCG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATTTCGTCTGACAGACGGTGAAACGCGTCGTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCTGCGGGGTCGCTGAACGTTCCGGGTGGCTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATCTGGTGGAGTCCAAAACGAGGGTGCAGGCG
GTTCTCCCCGCGCTCGCGGGGATGAGCC	CAGCACCAGAACCCACGCGGAATGCGATTCAAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TGCGAAACTGTCACTCAATTACCCCACCAGGTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGTCGCAGCCAGCTTCGTGGCCTTGTCAATCGC
GTCCTCCCCGCGCTCGCGGGGAGGAGCC	CACATGGAGGAAGCATGAAACCACACCCAGAAA
GTCATCCCCGCGCTCGCGGGGATGAGCC	CCACCCTGCTCGATATACACCCCACGATGAGAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGATTCACGCAATGAAAGTGCGTGCTGAGCACG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATATCCGACGCGCGTTCAGTTGCAGGGGGGCT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCAATCGCCGCCGCATTCGACTTCTTCGTCTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGATTCACGCAATGAAAGTGCGTGCTGAGCACG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGCCTACACCCTCGAGGAGGCTATCGCTGACCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAGGTCGTCGCGTGACCTGGCTGACCAGCTCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCCAGCGCAACGGCAACGTTTTCATTTCATGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAAAACAGTGTCCCTGTGGCTTAATGCAGAGCG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCGTCCAGTTCTGCGTCAGCCCCGGCCTTTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTAATTGACAACAGCAACTAAAGCGTCTGCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAATAACTACGCGCCGGGTTCGGGTGATACGAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTTGTGCGGTTCCACCGTCGCGAAATTCGCTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCGTCGTGCAGCTCTGAACACATGGATTGACCA
GTCCTCCCCGCGCCTGCGGGGATGAGCC	GGCGGCGTTTCCTGGCCGGTATGCCGAAAAGAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGTCACCGGAATTGACGCATACCCAACAGCAGA
GTCCTCCCCGCGCCTGCGGGGATGAGCC	CATCAACCCCGCCCCGAACTGGTACCAGGTGCG
GTCCTCCCCGCGCCTGCGGGGATGAGCC	GCCCTCGCCGGTATCGAGTGGGCGGGCCCAAAT
ATCCTCCCCGCGCCTGCGGGGATGAGCC	TCTGGTCTGATGGGCGGTAGGGCTTAAGTTTCC
GTCCTCCCCGCGCCTGCGGGGATGAGCC

>NZ_CP017639|2|1|34769-38761|CRT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGCGTGAAAAGCGCGACCAGTTGTTCTGGGAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CACTTTCGCCACCATCGACTGTGAGGGGTACGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGTCTCGCCAAATCTGCTCATCGACACCCGTCG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCAACCAGGGTTTTGCAACTTCCAATATTCCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCGTCTCGATTCGATTGACCAGGCGACCGCGAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGCGTTGTCCGCCTTGTGCGTAATGACACCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCTAGTAACATAGAATACTAGGTGTAAGGCAAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCAAAGGAGCTAATCAATGAGTAAGGAACTCGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAAAACCCCCGCGCAAAATGCATCACATACCCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CACACCCTGGGCGGCGTTGTGGTCAATGATGGT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGATTCGAAGGGCTTCTCGTAGGTCGTGGTCGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	ACCGTGAGGCAGTCCGAATCGGCGTGCATTCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCGACCTTGACGTGTGGTGGAGCAAGCTGCCA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTAGGTGTCAGTCCAGTCGAGGCCCATCACCAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGCACTGACTCCACCCCGCAAATGCGGACCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGTATCCTTCCAGGAATTCTCCGACGTGATGGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGTGACAACTTTCATTGCTCGCATGGTGGCGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCTATCCACCAAGAAGATGAAGTCGGTCGCGCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCAGGGGTCGGCGCAGGGGCTGACCCGCAATGT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGCGGCAAGCGCCGCCGAATCGTACTCCCCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCGCCGACCATCAAAGTCGGCACAGACGGGGTG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTCGGCCAAAAACTTTCGCGTCGCCTCGTGCTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTTTATATGTAAGCAAGGACCGAAAGGGTCCAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TTCTGGTTTTCCCTCGCATGGTGGACGCACATT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCCCTGATTCGTCCGGCTTAAACGGATCCCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CACCGGCTTCACATATTTTCGCCCAGGCCCTAC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCACTTGCGCAGGATGCGCCCATAATTCTGTCT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCACAACCTCCACACAGTTCGGGTCGGGGTGT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCATGTGTGACGGGGTGAAGATCGCCGACCGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGAATGAACTCCGAAACGACGTTTACGTTCCC
GTCCTCCCCGCGTTCGCGGGGATGAGCC	CGTTGTTTGTAGGTTGGTCACGTCGGCGATCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TAAGCGCTGGGTTGATGCCCAACTCGCAGAAAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTTTGGCAAGCAGGTTTCTCATTGTTCTCTTTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAAAATCCTCAATTTCACGCTGCCTGCGCATCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCCGGACCCACACGAAACCATCCCCGATGTGAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCAATTGCCTCGAACCCCAACGATGTTTCAGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	AACGCCTCAACCATGTCGCGCACCAAGTACTGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TCTGCTCCGGCTTGCCGCTCTTGCGAGCCTTAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCAACAACGCGAACGCCGTGACTATCGGATTCG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATTTCGTCTGACAGACGGTGAAACGCGTCGTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCTGCGGGGTCGCTGAACGTTCCGGGTGGCTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATCTGGTGGAGTCCAAAACGAGGGTGCAGGCG
GTTCTCCCCGCGCTCGCGGGGATGAGCC	CAGCACCAGAACCCACGCGGAATGCGATTCAAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TGCGAAACTGTCACTCAATTACCCCACCAGGTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGTCGCAGCCAGCTTCGTGGCCTTGTCAATCGC
GTCCTCCCCGCGCTCGCGGGGAGGAGCC	CACATGGAGGAAGCATGAAACCACACCCAGAAA
GTCATCCCCGCGCTCGCGGGGATGAGCC	CCACCCTGCTCGATATACACCCCACGATGAGAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGATTCACGCAATGAAAGTGCGTGCTGAGCACG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATATCCGACGCGCGTTCAGTTGCAGGGGGGCT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCAATCGCCGCCGCATTCGACTTCTTCGTCTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGATTCACGCAATGAAAGTGCGTGCTGAGCACG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGCCTACACCCTCGAGGAGGCTATCGCTGACCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAGGTCGTCGCGTGACCTGGCTGACCAGCTCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCCAGCGCAACGGCAACGTTTTCATTTCATGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAAAACAGTGTCCCTGTGGCTTAATGCAGAGCG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCGTCCAGTTCTGCGTCAGCCCCGGCCTTTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTAATTGACAACAGCAACTAAAGCGTCTGCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAATAACTACGCGCCGGGTTCGGGTGATACGAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTTGTGCGGTTCCACCGTCGCGAAATTCGCTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCGTCGTGCAGCTCTGAACACATGGATTGACCA
GTCCTCCCCGCGCCTGCGGGGATGAGCC	GGCGGCGTTTCCTGGCCGGTATGCCGAAAAGAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGTCACCGGAATTGACGCATACCCAACAGCAGA
GTCCTCCCCGCGCCTGCGGGGATGAGCC	CATCAACCCCGCCCCGAACTGGTACCAGGTGCG
GTCCTCCCCGCGCCTGCGGGGATGAGCC	GCCCTCGCCGGTATCGAGTGGGCGGGCCCAAAT
ATCCTCCCCGCGCCTGCGGGGATGAGCC	TCTGGTCTGATGGGCGGTAGGGCTTAAGTTTCC
GTCCTCCCCGCGCCTGCGGGGATGAGCC

>NZ_CP017639|2|1|35440-38761|PILER-CR
GTCCTCCCCGCGCTCGCGGGGATGAGCC	ACCGTGAGGCAGTCCGAATCGGCGTGCATTCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCGACCTTGACGTGTGGTGGAGCAAGCTGCCA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTAGGTGTCAGTCCAGTCGAGGCCCATCACCAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGCACTGACTCCACCCCGCAAATGCGGACCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGTATCCTTCCAGGAATTCTCCGACGTGATGGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGTGACAACTTTCATTGCTCGCATGGTGGCGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCTATCCACCAAGAAGATGAAGTCGGTCGCGCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCAGGGGTCGGCGCAGGGGCTGACCCGCAATGT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGCGGCAAGCGCCGCCGAATCGTACTCCCCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCGCCGACCATCAAAGTCGGCACAGACGGGGTG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTCGGCCAAAAACTTTCGCGTCGCCTCGTGCTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTTTATATGTAAGCAAGGACCGAAAGGGTCCAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TTCTGGTTTTCCCTCGCATGGTGGACGCACATT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCCCTGATTCGTCCGGCTTAAACGGATCCCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CACCGGCTTCACATATTTTCGCCCAGGCCCTAC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCACTTGCGCAGGATGCGCCCATAATTCTGTCT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCACAACCTCCACACAGTTCGGGTCGGGGTGT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCATGTGTGACGGGGTGAAGATCGCCGACCGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGGAATGAACTCCGAAACGACGTTTACGTTCCC
GTCCTCCCCGCGTTCGCGGGGATGAGCC	CGTTGTTTGTAGGTTGGTCACGTCGGCGATCGC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TAAGCGCTGGGTTGATGCCCAACTCGCAGAAAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTTTGGCAAGCAGGTTTCTCATTGTTCTCTTTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAAAATCCTCAATTTCACGCTGCCTGCGCATCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCCGGACCCACACGAAACCATCCCCGATGTGAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCAATTGCCTCGAACCCCAACGATGTTTCAGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	AACGCCTCAACCATGTCGCGCACCAAGTACTGG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TCTGCTCCGGCTTGCCGCTCTTGCGAGCCTTAG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CCAACAACGCGAACGCCGTGACTATCGGATTCG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATTTCGTCTGACAGACGGTGAAACGCGTCGTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCTGCGGGGTCGCTGAACGTTCCGGGTGGCTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATCTGGTGGAGTCCAAAACGAGGGTGCAGGCG
GTTCTCCCCGCGCTCGCGGGGATGAGCC	CAGCACCAGAACCCACGCGGAATGCGATTCAAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	TGCGAAACTGTCACTCAATTACCCCACCAGGTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGTCGCAGCCAGCTTCGTGGCCTTGTCAATCGC
GTCCTCCCCGCGCTCGCGGGGAGGAGCC	CACATGGAGGAAGCATGAAACCACACCCAGAAA
GTCATCCCCGCGCTCGCGGGGATGAGCC	CCACCCTGCTCGATATACACCCCACGATGAGAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGATTCACGCAATGAAAGTGCGTGCTGAGCACG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CATATCCGACGCGCGTTCAGTTGCAGGGGGGCT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTCAATCGCCGCCGCATTCGACTTCTTCGTCTC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGATTCACGCAATGAAAGTGCGTGCTGAGCACG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GGCCTACACCCTCGAGGAGGCTATCGCTGACCC
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAGGTCGTCGCGTGACCTGGCTGACCAGCTCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCCAGCGCAACGGCAACGTTTTCATTTCATGA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAAAACAGTGTCCCTGTGGCTTAATGCAGAGCG
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGCGTCCAGTTCTGCGTCAGCCCCGGCCTTTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CTAATTGACAACAGCAACTAAAGCGTCTGCCAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CAATAACTACGCGCCGGGTTCGGGTGATACGAA
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GTTGTGCGGTTCCACCGTCGCGAAATTCGCTTT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	GCGTCGTGCAGCTCTGAACACATGGATTGACCA
GTCCTCCCCGCGCCTGCGGGGATGAGCC	GGCGGCGTTTCCTGGCCGGTATGCCGAAAAGAT
GTCCTCCCCGCGCTCGCGGGGATGAGCC	CGTCACCGGAATTGACGCATACCCAACAGCAGA
GTCCTCCCCGCGCCTGCGGGGATGAGCC	CATCAACCCCGCCCCGAACTGGTACCAGGTGCG
GTCCTCCCCGCGCCTGCGGGGATGAGCC	GCCCTCGCCGGTATCGAGTGGGCGGGCCCAAAT
ATCCTCCCCGCGCCTGCGGGGATGAGCC	TCTGGTCTGATGGGCGGTAGGGCTTAAGTTTCC
GTCCTCCCCGCGCCTGCGGGGATGAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017639.1\|WP_084028515.1\|41508_43098_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240129
NZ_CP017639.1\|WP_070361638.1\|28168_29299_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP017639.1\|WP_070361637.1\|27449_28172_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP017639.1\|WP_070361646.1\|43602_43803_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361650.1\|46103_46478_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361635.1\|25799_26738_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP017639.1\|WP_070361640.1\|29945_31649_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP017639.1\|WP_070361647.1\|43900_44128_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070363398.1\|22429_24010_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP017639.1\|WP_070361648.1\|44141_44915_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361633.1\|24162_25167_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_145945212.1\|45402_46131_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361651.1\|47056_48520_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017639.1\|WP_145945213.1\|46474_46759_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361643.1\|41164_41509_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361639.1\|29323_29953_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP017639.1\|WP_084028514.1\|39461_41168_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP017639.1\|WP_070361636.1\|26739_27453_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP017639.1\|WP_070361634.1\|25446_25803_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_CP017639.1\|WP_070361641.1\|31707_34494_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031

Protein	Function_ID	Function_description	E-value
NZ_CP017639.1\|WP_084028515.1\|41508_43098_+\|hypothetical-protein	gnl\|CDD\|240129	cd04859, Prim_Pol, Prim_Pol: Primase-polymerase (primpol) domain of the type found in bifunctional replicases from archaeal plasmids, including ORF904 protein of the crenarchaeal plasmid pRN1 from Sulfolobus islandicus (pRN1 primpol). These primpol domains belong to the archaeal/eukaryal primase (AEP) superfamily. This group includes archaeal plasmids and bacteriophage AEPs. The ORF904 protein is a multifunctional protein having ATPase, primase and DNA polymerase activity, and may play a role in the replication of the archaeal plasmid. The pRN1 primpol domain exhibits DNA polymerase and primase activities; a cluster of active site residues (three acidic residues, and a histidine) is required for both these activities. For pRN1 primpol, the primase activity prefers dNTPs to rNTPs; incorporation of dNTPs requires rNTP as cofactor. The pRN1 primpol contains an unusual zinc-binding stem, which is not conserved in other members of this group.	3.46463e-10
NZ_CP017639.1\|WP_070361638.1\|28168_29299_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.54179e-161
NZ_CP017639.1\|WP_070361637.1\|27449_28172_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.64697e-44
NZ_CP017639.1\|WP_070361635.1\|25799_26738_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.5174e-123
NZ_CP017639.1\|WP_070361640.1\|29945_31649_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	4.09262e-104
NZ_CP017639.1\|WP_070363398.1\|22429_24010_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.42311e-60
NZ_CP017639.1\|WP_070361651.1\|47056_48520_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.31535e-11
NZ_CP017639.1\|WP_070361639.1\|29323_29953_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	3.68161e-33
NZ_CP017639.1\|WP_084028514.1\|39461_41168_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	3.57599e-35
NZ_CP017639.1\|WP_070361636.1\|26739_27453_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	6.63927e-77
NZ_CP017639.1\|WP_070361634.1\|25446_25803_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	2.0069e-41
NZ_CP017639.1\|WP_070361641.1\|31707_34494_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.50411e-83

>NZ_CP017639.1|WP_070361641.1|31707_34494_-|CRISPR-associated-helicase/endonuclease-Cas3
MRPGHELPESTLETAQLFEKWVSQRSPQAQSLWAKSGDDTGHLSVPQHLVDAACSAAAVFDVWVADNIKREIAGHLGITVEELRTFYIWLAGTHDVGKITRAFQTQLQDRAGYEHIINSIVDTGLDLEKDELPKMPHGRSSGVILRRWLEAQGMPRTMATWVGSIGDAHHGVASTGDEKSAIEAVLEEYPAAWLGVQDEIVSAMTTTLHAQPVLDKIGKIEDPEAGVAQFLTGLVVIADWIASNAEAFPMVVDKGQVERLRSGMAQTDLTAPWHPAKPISDIDELYRASFAWPQHFNARNVQRALAEAARRATRPTLFILEAETGVGKTEAALAAAHIIADQTGAQGIYFAAPTMATANGLLERTIDWARNTSGVGAVTSLYLAHSKNQLSRAAMSLPRGIAEDETSNRGDVIASSWMRGRRRGLLSNIVVGTIDQVLMMSLMQRFSMLRHAALAGKVIIFDEVHAYDAYTSEYLETTLEWLAYYGASVIMMSATLPAQRRASLVEAYTGVAPEEAPHGYPLITVADESATTYITPPPNPTNMVATIEHIDDSLDTLRGTLDNLLIDGGCALIICNTIARAQDAYRELKTQYADDIELHHAGFIAWERSQKEDELREQLGPHARRGAGRPYRKVVVATQVAEQSLDIDADVLITDIAPMDLAVQRAGRLQRHSRPVDDRPPQLQDPKIFIRGVLSPLPTPEFDGGAKAIYDPQILLSTLLHLPTTFHRPDDIEELVQSTYDLDTTVVPDEMQQIWDEAAGVSQLRQHNARERSKSFRTPSPFCSTRLNEFFKDSKAVLNLDREEAGAAQVRDAEPTVEVIPIIETDYGYRLWGVDKEVLADAEPDYQTAFQLASSTVRLPARLTRYESDFNIVMDALEENTPVTWSKHYLLNGQLALPLDEDGETRIGRFLVRYSSELGIEVSFERGE
>NZ_CP017639.1|WP_070361640.1|29945_31649_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNVTFNLVHEPWICTTTADGDKVLSLQQIFDGTEQPLSVVGDSPTQDYAVLRVLLAIYWRAHHHHLKSSVPTGRRSRGFRWESWFQEQRNQARQHQRDDIVLAYLKEYEHRFNLIDDEVPFMQVANLHTSKNTHSPISRILPDAEADFFTMRTGAGRASISFPEAARWLIHQHAYDYSGIKSGAADDPRVKGGRGYPIGTGWAGMTGGTVVRGDTLQETLVLNTVKEAVDPTATGDTPIWERDPDTAKQRLFDPSAPKEGVMPNGPADLATWQTRRIRLFPEGDRVTRVLVCNGDRIPDAGKNVFGDPMTPYRYSPNQSKKDLTAYYPKPYDSERTVWNSIDALLVSENDAGFGGKNLAPIKPATLANLAEIADVTREQELLDIAIVSMAYGPQSSSVGTVISGEIGLPLYLLQNNEYSTTDRQRVRAAAQAVRDTAVCLGWFEGQLAVAAGGEYSFGTKSADRLYALLEPEFMTWLRNLNIDDVASECVRWQELVRDSALELAAELVRGAGPKAMIGRLDSTEDGKGRVINAGSIHNQLLRKLRDALPLLAQRNADRTSQQGENHD
>NZ_CP017639.1|WP_070361639.1|29323_29953_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTKPTLRAAVGATATRLQNHYLEQAHTALGASARGSLADLRKYASIGLEHNPLALQDVLMLLQPELSDQELGKSDKPSPSEYAAFYALALFGVHMQSARTPAHKQGDSFALACGQLYRKTESNSIKQRFDAMQVALDFPSRITHLRSLVSLLRSQDLPFDYGQFAGDLRSLQNPKYRDGVLLRWGRDFAIGTLRPSAQAEAQELDNAIR
>NZ_CP017639.1|WP_070361638.1|28168_29299_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSLIIDIHALQTVPPSLINRDDTGAPKTAVFGGVPRQRVSSQSWKRAIRKYFAEHFDPESIGDRSKRLPEKIAKQLAKVAGISDEDAIKRTEQLFNAVKIKTVVEKPKKGDDTEHNPWPQTTYLIFLSPQQIDRAVRELAERDGQKFTKAEATAILDTNHSVDMSMFGRMVADDASFNVDAAVQVAHAIGVHASAPEFDFYTAVDDLAEEGEETGAGMLGTVQMMSSSLYRYATINVDGLKKNLESTDATIKAVEQFIEAFVASMPTGKINTFANQTLPELVFVTVRDTRPVSLVTAFEDAVTATEQLDRRHVAAARLADEARAIQDTYGFVPTSQYVLGLGDIAAPFDGLAERVTLKELGERVAADVATALGDDA
>NZ_CP017639.1|WP_070361637.1|27449_28172_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSSSLLLLLKGPLQSWGDESRHKIRATALTPTKSGIIGLIAAAQGRRRTDPVEDLTRLRLGVRVDQSGSLLRDYQTAQPWLTDPNASAELITRYFLSDAAFVVAVESDDRALLEGIAEALRAPAFPLFMGRRSCPVHPGLVIGIVDTDAETALREHPTWHATAQHKREAPKHVNLALYRDADEEEQGGVRRQDVPISFDPQHRRYGWRDVLRVEDVAIDNPDGTESLVDSDVFFETVIKA
>NZ_CP017639.1|WP_070361636.1|26739_27453_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MSNTFTRILINPARRQGRRLLTDSQAMHAAVRSAFPPDLDETAGRVLWRVDSQEHTHVLYIVGPGKPTADSIVEQAGWDTRPAKIADYSRFLDSIMKGQRWKFELVANPTYSEFQQGKRGKIKAHVSPRHQLAWLRKKSLAHGFALAPGLDDEVNDEERAHWDAFEAPAVIQSWTDVFHRKKADGTKGRPVRIAKARFSGVLEVTDVEAFRRTLTQGIGRGRGYGCGLLTLAPSNRC
>NZ_CP017639.1|WP_070361635.1|25799_26738_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MPTPDELPITRRALARMSDRLSFLYAERCVVNRDGNALTITDQRGTAHVPATQLAVLLLGPGTRITYAAMALLGDAGTSTVWVGERGVRYYASGRPPAKSSRMALLQAEVVTHQRKRLDCARKMYSLRFPGEDVSTLTMAQLRGREGSRMKRVYAAEAERTGVYWDRRSYDPHDFDSGTPINQALTAASAALYGIAHAVIAGLGFVPALGVVHTGTDRAFVYDIADLYKAEIAIPAAFDAVAEAKGKPHIEVRRKVRDAVVEKRLMQRMVKDLQYVMDVPEEELYSDVELMLWSELEVISAGVNWAEEEALQ
>NZ_CP017639.1|WP_070361634.1|25446_25803_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MMVLIVTACPAGLRGDLTKWLMELSPGVFVGTPSARIRDLLWDRTIELCKDGRALLVYSSNNEQGMEFREHRHAWKPTDFDGITLMMRENARAPKRRTGWSKARRQRIAYERDRRTSS
>NZ_CP017639.1|WP_070361633.1|24162_25167_-|hypothetical-protein
MNTLYNGMTIDLDTPLIHQKQRTPNHAYQQVSVRRYLQNEHCLQPWQVQNNARYHPKNVRYHAPAAVRAIAHAVEQPGSIIAGFSALALYGLPYLVEGADTTLVTTSGHTSVAGACRPTIRRSRISLATWTVTHRGVSLQAVTPLTAVIQALVQVKRGEHLWRTVTVEGLAPEEVRGIQLVDCVRRFWGITPSSIAKAARHKIDATWLHKVLRHSSVLADSPKETEMRLLVAALANRYGCTVEEQVPLRVGDQLVTVFDLAIPELKIAVMYDGAHHSDYQQRNKDSSITLKMIRQGWTPARCSAATMFECLTLIEELMQEGRVRVQTRKVPNGF
>NZ_CP017639.1|WP_070363398.1|22429_24010_+|MFS-transporter
MSLAVLSVGLGVIVLDGTIVGVALPSIITDLGLDLTQAQWVNSLYAVLLAALLLSTGKIADSWGRKRAFLAGLGVFVAGSVLAGFSTSASTLISARAVQAVGAALIMPSTLSTVNAVFRGKYRAAAFGVWGAVISGAAAVGPLAGGALTQWVSWHWIFLVNVPIGMLVAIGAVLTVRETRSPDKLPGIDVDGAQLSAIAFGTLVFAIIEAPDLGWWTPKEPLTVFGWTWSTTAPVSPVPVSLAISAVAFALFIRWEQHRKRVERSALLDLGLFSYSTFSWGNITAGAVAIGEFAIIFILPLYLINALGLSVMSAGLVLAAMAVGAFLSGAAARHVAARFGAPGTVLIGLALEVVGVIILASVMGANTSGWLIAAPLTLYGLGLGLASAQLTGTVLRDIPVQRSGQGSATQSTVRQIGSALGTAVSGSVCSMALAITLPKTLTAAGITGPLADATSSTTRQSAGSAITQLRMEGTASAFGDQTAAVVQALSEGMADAARWSLLAATAFLALGFVGALQVRRAAKAGA
>NZ_CP017639.1|WP_084028514.1|39461_41168_+|recombinase-family-protein
MSKRPVRAVIVTRLSRETENSTSIERQEKDCREKCKAEGWQVVGVAKDVNVSAGRRNPWQREGLREWIGKSKADPGRTDEFDVLVFWRMDRLVRSVTQLWELLIWAGEHGVTLVSATEQMFDTTKPEGKLMISMVGAFAELELEAIRERIHADQQHRITAGQYAGGVPPWGYRPVKNEQGEWMLEPDPQQVKVINRVVHALLHENKSLKAITRELNAEGVPTVRDLNNARHGRPMKGYSWSTTPLTRQLRNPTLLGLVTIAEGVQDAHGRPVRDKYGNRTYEKGRILLGPDNRPLRRAEPVISKEDFDAVQKVLDARSVKTPKSSRSSSLLLNVLFCGCCGDKAYLLHRSDGKYASYYRCSSMSHQRGGRRECSPKQISTQADWIEDVVTTAFLGVFGDSVRTVRVWHEGTDTSNEIEELNESMNSVAGVLARQRPGSAAFNSLSHQIDQIQARLDELEAVETTPSGWIWEPTGQTIREWWENASVKERNAYLVECGVRAEFEHAGPNQRGINPSVRISFEDFEGVMSTLTPSEPAERLSEALKEVPSSVTMHLHNGDASFEQREEEK
>NZ_CP017639.1|WP_070361643.1|41164_41509_+|hypothetical-protein
MIVSHWLSDNAGVLVVRDERTPRTAQLDDCILENGWGLRLALQYGQLLLEAWGSAGVVPVDVLEESGFIRMQDVASEYGVPLEVLVQQMLEDGLLLEVGGALVASPHPAVRRMD
>NZ_CP017639.1|WP_084028515.1|41508_43098_+|hypothetical-protein
MASFYRLAVSNKQDKQQEGGSRLVCLDTVFSGVRAVRCKPGTKEIVQGSPAVDPTEAVNRAGINGTGGLVVVDFDAKNGASELELQRAFPGVLDSPTLVVSTATKGCCHYVYRWPGKLPVRAGDSSVTLVPGVEVPARYMMYGSSVNGVTYTVLRDEPVAELPADLYAVLVADWQQLEHPTPVTGLSLTQQEREARAFELLKSFGKYEAGKTNEKFLEVAFPVLQLLGVERGALELEAAWPSATDSEAEIRARVSSAVASYTAEADPSNTGARYSPTRARVLLKLERAARYGAWKGRSAPNDRRVLLAVLERASRVNELVVSYPAETLANRVGIKPSSVRESLERLSSAGWLYWMPKHSLVALTSSELVRLLIKGNSPSRGSSTGGGYSPFQSQEATSFLHPVDEVWRAPGLRARHAHLFDLVDAGVNVRSSLVARSGASKATVSETVRSLQEHGLIVENAGVLEVAPTASSVVATLREQASETYASVRAGIESDHRRLEAFRNERRLENQQRLEDAYRRRELEETAPV
>NZ_CP017639.1|WP_070361646.1|43602_43803_+|hypothetical-protein
MYRYSNGSTPDQQQEANRRYRRKQAHYRQWLDDVAAELGLNRDQLTTSRNAELVARALALTTPQQE
>NZ_CP017639.1|WP_070361647.1|43900_44128_+|hypothetical-protein
MPLPLNGTAVTQFVADQLMQRPAHQLARALASLEEPAGTMTDPEVRVRTPRTSDTVAKLEFLFSGNEPEFTTNHY
>NZ_CP017639.1|WP_070361648.1|44141_44915_+|hypothetical-protein
MSYCTTPDLVIHAVHKLGEKHPKPVQDLLDAAQALEEIGKQAPSWEGVEDPTKVVDVVQEQVRYRVMNSDELREVRNQARTKIANALAREMEDHTGAYLKAIQKTFEAAANQYTEAVAELPREFDSKDLLEWEPVRFDAYTRAKQANAVLDQAKTWMFELGKVVNSENYPPSLSTELLVLEPQALEHYVSIQTADGTCTDNALRAVNPVRLKAVKDGVPLRLSLPSKVRKAVTQFEAQRQQLSDTEARELRLRAPAY
>NZ_CP017639.1|WP_145945212.1|45402_46131_+|hypothetical-protein
MTTTLPEPPVLTKKQRARLECQQRRQQARAYYAEAQTPAQFTHLVNRWLEFQQAQKLPQEHHQALREAGVKRCPSCTVVKDLEAFSTLKNGSQNYQCKTCAANRYGDYRKENLEQVRARDRKASARWKRANPWAVRLGNGYQRAVRMGAPAVRITPEQLLNYWESVGIDPSKSYYTGTPLTPENCSLDHLDPLGRSGTMGHVLENLFPCTVEENTHHKRGLAPHHGLRNIREKVCKPTNQKG
>NZ_CP017639.1|WP_070361650.1|46103_46478_+|hypothetical-protein
MQTNQPEGLNTAGKHLWDSMHNEFDFAGEPGKLVILERACRTADQIAKLEEATSNAPMTATGSMGQLVIHPFIQEIRQQTSTLNTLIKSLGLPDSDEEAAVKAKTRQQAATKAANARWNRGGGK
>NZ_CP017639.1|WP_145945213.1|46474_46759_+|hypothetical-protein
MTVRRGRAVTSTPEAVAQLLREPALQQLPAAPALEAGTGMALPGATGRYELFFAELLAEVEAEVPHATRSFGLEVARLAGVSLADWYRLVMREQ
>NZ_CP017639.1|WP_070361651.1|47056_48520_+|DDE-type-integrase/transposase/recombinase
MAIPLHKRRKVADFDPVRDGKTVTQFCKELGISRQTYHNIKNRIAQKGRAGIVPDSTAPKNPMKKFDEADKIAVIHARQQLMEQGLDYGPWSIYYFLFDSVGADRTPSRSTIASWLYELGFVDANARKRPRSSYKRFARDFVGELWQIDGLVYRLFDHAHTHVTIYQIIDDASRFDVGTTAFALPENGTDARATLAAAFAAYGKPQEILSDNGDAFATYHRGFLSATETWLASQGVLAIAGFAPTTQGKDERSHRTLTQFLDARHPASLAEVNTYLAEYRQVYNEQRRHQSLLVGKMHITPRQAFDTFPKAPSPTHPLDPDQIWARVVAYNQAHNPQAISKMPNGPVEAATSHEANTDDMAAQQGIPPTDTSTLTAPTPQSTNHWGIPDQLCVSKDGVVRVCGFGLYIGLRFKNRRLYSTVAVDNVAEFYTAHDGEFLFSVPLPITLSHRPPGGQININLVEGMKHRQPPRMNPKLSKPRPKRRLQP

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Crispr_ID: NZ_CP017639_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017639_3

107085-107170

Unclear

Consensus_repeat	Method
AAACCGGCACGATCGTGCCGAAACT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP017639_3

>merge|NZ_CP017639|3|107085-107170|CRISPRCasFinder
AAACCGGCACGATCGTGCCGAAACTGCCTCTTGCGCACCACTATTCCGCACAATATACTTCAAAACGGCACGATCGTGCCGAAACT

>NZ_CP017639|3|3|107085-107170|CRISPRCasFinder
AAACCGGCACGATCGTGCCGAAACT	GCCTCTTGCGCACCACTATTCCGCACAATATACTTC
AAAACGGCACGATCGTGCCGAAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017639.1\|WP_070361675.1\|95674_97927_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350194
NZ_CP017639.1\|WP_070361686.1\|110238_111972_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225420
NZ_CP017639.1\|WP_070361688.1\|114556_116275_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|376109
NZ_CP017639.1\|WP_070363403.1\|104441_104783_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380358
NZ_CP017639.1\|WP_070361689.1\|117926_118292_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|198372
NZ_CP017639.1\|WP_070361682.1\|107216_107441_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|213767
NZ_CP017639.1\|WP_070361672.1\|88366_88930_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070363404.1\|113613_114387_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361676.1\|98292_100380_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|226003
NZ_CP017639.1\|WP_070361674.1\|89309_95678_+\|DEAD/DEAH-box-helicase	cas3	cd09710_cas3_CAS-I-D	gnl\|CDD\|224126
NZ_CP017639.1\|WP_070361683.1\|107593_108955_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273283
NZ_CP017639.1\|WP_070361677.1\|101601_103656_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226406
NZ_CP017639.1\|WP_143000787.1\|109091_109436_+\|excisionase-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP017639.1\|WP_070361678.1\|104798_105230_-\|DUF488-domain-containing-protein	unknown	unknown	gnl\|CDD\|377317
NZ_CP017639.1\|WP_070361681.1\|106717_106918_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_083290909.1\|100640_101108_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070361685.1\|109432_110017_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379205
NZ_CP017639.1\|WP_070361687.1\|112503_113460_+\|diaminopimelate-dehydrogenase	unknown	unknown	gnl\|CDD\|273877
NZ_CP017639.1\|WP_070363405.1\|116936_117674_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_084028520.1\|105516_106125_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP017639.1\|WP_070361675.1\|95674_97927_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|350194	cd18807, SF1_C_UvrD, C-terminal helicase domain of UvrD family helicases. UvrD is a highly conserved helicase involved in mismatch repair, nucleotide excision repair, and recombinational repair. It plays a critical role in maintaining genomic stability and facilitating DNA lesion repair in many prokaryotic species including Helicobacter pylori and Escherichia coli. This family also includes ATP-dependent helicase/nuclease AddA and helicase/nuclease RecBCD subunit RecB, among others. UvrD family helicases are DEAD-like helicases belonging to superfamily (SF)1, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF2 helicases, SF1 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	4.2716e-15
NZ_CP017639.1\|WP_070361686.1\|110238_111972_-\|AAA-family-ATPase	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	8.39633e-29
NZ_CP017639.1\|WP_070363403.1\|104441_104783_+\|cupin-domain-containing-protein	gnl\|CDD\|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	2.20975e-25
NZ_CP017639.1\|WP_070361689.1\|117926_118292_-\|hypothetical-protein	gnl\|CDD\|198372	cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases. This subgroup is composed of uncharacterized bacterial and archaeal xylulose kinases-like proteins with similarity to bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. The presence of Mg2+ or Mn2+ is required for catalytic activity. D-XK exists as a dimer with an active site that lies at the interface between the N- and C-terminal domains. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	7.68631e-23
NZ_CP017639.1\|WP_070361682.1\|107216_107441_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|213767	TIGR03070, couple_hipB, transcriptional regulator, y4mF family. Members of this family belong to a clade of helix-turn-helix DNA-binding proteins, among the larger family pfam01381 (HTH_3; Helix-turn-helix). Members are similar in sequence to the HipB protein of E. coli. Genes for members of the seed alignment for this protein family were found to be closely linked to genes encoding proteins related to HipA. The HibBA operon appears to have some features in common with toxin-antitoxin post-segregational killing systems. [Regulatory functions, DNA interactions].	2.57998e-15
NZ_CP017639.1\|WP_070361676.1\|98292_100380_-\|DUF262-domain-containing-protein	gnl\|CDD\|226003	COG3472, COG3472, Uncharacterized conserved protein [Function unknown].	1.22979e-34
NZ_CP017639.1\|WP_070361674.1\|89309_95678_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|224126	COG1205, COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only].	1.69066e-70
NZ_CP017639.1\|WP_070361683.1\|107593_108955_+\|hypothetical-protein	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	6.1253e-98
NZ_CP017639.1\|WP_070361677.1\|101601_103656_+\|hypothetical-protein	gnl\|CDD\|226406	COG3889, COG3889, Predicted solute binding protein [General function prediction only].	5.67476e-10
NZ_CP017639.1\|WP_143000787.1\|109091_109436_+\|excisionase-family-DNA-binding-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.00631e-13
NZ_CP017639.1\|WP_070361678.1\|104798_105230_-\|DUF488-domain-containing-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	4.27694e-23
NZ_CP017639.1\|WP_070361688.1\|114556_116275_-\|transcriptional-regulator	gnl\|CDD\|376109	pfam18685, DUF5635, Family of unknown function (DUF5635). This is a domain of unknown function which is found at the C-terminal region of pfam13749 in actinobacteria.	2.7121e-38
NZ_CP017639.1\|WP_070361685.1\|109432_110017_+\|hypothetical-protein	gnl\|CDD\|379205	pfam13470, PIN_3, PIN domain. Members of this family of bacterial domains are predicted to be RNases (from similarities to 5'-exonucleases).	0.00162894
NZ_CP017639.1\|WP_070361687.1\|112503_113460_+\|diaminopimelate-dehydrogenase	gnl\|CDD\|273877	TIGR01921, Meso-diaminopimelate_D-dehydrogenase, diaminopimelate dehydrogenase. This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.	3.19845e-159
NZ_CP017639.1\|WP_084028520.1\|105516_106125_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	9.17591e-13

>NZ_CP017639.1|WP_070361681.1|106717_106918_-|hypothetical-protein
MTAPLVENLSKEAARHELAELKKSIESLSGDSFEEFEERADNYNLTPREFAVWERVSELRWLLGDD
>NZ_CP017639.1|WP_084028520.1|105516_106125_+|GNAT-family-N-acetyltransferase
MPTIRRARPDDAEALVELSIATFTQTFGHLYDPADLAAFLNEAYDLQKHKILLADPDHATWVVEDNGALVGYALAGPCSLPHPDVLPEDRELKRLYLLADHQQSGLGSTLIELVLDWIGPRTAWLGVWSQNFGAQRFYHRYGFSKAGEYFFKVGNHRDHANLFRSISNDFGVVIRRAFPIFGHGHLELKNNGCCLALSPFQA
>NZ_CP017639.1|WP_070361678.1|104798_105230_-|DUF488-domain-containing-protein
MRIYTLGFSHKSAEEFFDILRESGVRRVVDIRRSNTNQLAGFTKKDDLRYFLRVILDMPYTHELALAPSADLMHAYRHDEVGFDEFSKQLREEYDAGEVSSLDRSLFDDAVLLCSEADPSTCHRLVAAEYLAEVWDDVEIVHL
>NZ_CP017639.1|WP_070363403.1|104441_104783_+|cupin-domain-containing-protein
MQTINAVAPRPDNARPGVKRLLQGDGANLIVFNFCPGQTLPAHKAAHPITVQCLNGSLEFECGGERFPLKQGEVVHLRAYVPHAVYCPDNALSAGNILLLSMLTGERHGEQDS
>NZ_CP017639.1|WP_070361677.1|101601_103656_+|hypothetical-protein
MNRKKLVALCGAIAIACGSITAVGGPVAGAYVEKQDTAGMQPSPDVTDAAKIPAVDVKVETDKADEVKAGDTFNITISGTAEAPFPAGDAAAQPGQSNILGFTVEVTLPDGIELADQAAVNINGQSLGTLAFNQLPSGSYEVDLRGAMGEKGNFQITVPVKATKDAPAGETLTFSGAAQALINPEFSFDAVPGKRTVSPQEVDGKCTWIAKTEYELHAGEYGAWLTELFLGVIDPANVQLGDATITIFDADGKKVTGKAGEFDAEGRLTDPRTLEKRNEQYKNTTWQQTYDWGLNLNRADLNKTLGQVFLPSGSRVVIEQPVYDNQRHCSMTEVYPSDIYSSYVGGVIMNPIKRETAKTQISAPEAPTSPAETPTPTVTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTADCDCSPTTVTETATTTEKAPEPTTETATVTTKEITPTTVTKKVPEPTTETTTVTTKETTPTTVTATATETTTTTTTTTEKATETVTTTVTTTPVAPADPQDPTPTVTATSTPTAPGKTAERCFANALASPLFYFVPVGVLAAVGGELARPYAGALNEQLARINADIQAAFQQDSPDRGRNGRTPRNDDPSAALRAQLEEANRRFQEIASDPNVQRIGTVAAVIFGLAAASAILYDWCSSEPGKAFTAVEGSSAAERFLNRNR
>NZ_CP017639.1|WP_083290909.1|100640_101108_+|hypothetical-protein
MLFAWPDRKHLNDLWGIDADALVVIEWNTEETQEWIEDNQPILLLHDRTTPYVPDEEETTHAEPLPNGIDRILEYVARMAAGYSSGLKWNEVDKLKADMMNRPDRWKPVTVEQVRAKCKELGMRPNDVDTIADLLQRRKDGRSFRVEPSYRNFHS
>NZ_CP017639.1|WP_070361676.1|98292_100380_-|DUF262-domain-containing-protein
MASIFRTVPWDVQQLVNDVHSGRIQLPDLQRPFVWPTSKVRDLFDSMYRGYPVGELMFWDVAADGESRSISGDANFIGQHQIIDGQQRLTSLYAAIKGFPVRDVNYNEKRIRIAFNPFSEKFEVRTPPIAKSPEWVEDISTYFASSYKARKAFFKRYEESGGTLSDEEEEAVHDVFSKLSGLEKYRFNVVHLQSEADKRLVADVFVRINSEGVRLKAYDYILTWLSVFWPEGREQIEEFSRNSRMSPAHASSALGKEIQWTAHNPYIDVENGHLVRAMVAVGQRRGRLQDAYAALQAKDRHTGRVNSERQERELGLLKDALPVVVDHTNWTEFTRSIQAAGFRTNRNVTSHMNIIYSYVIFLLGRNDFDVELARLRALVARWLFMSQLTARYTGSSESQIQKDLDQIAALDKGDADGFEELLNRTISTQLTEDYWRFNLPQNLVTSGAALSPHYQCYLAALNILDAKMFMLNERVRDWMDPNQPAAKGTEGHHLFPRKYLEKVLGITDFKRINQVANFAPTDWATNIHISDRAPKDYWQELVEKRAPDEEWLKQQMYWHAIPEGWENMSYDEFLSNRRSLIAQVIRDAFAHITAGSAPVISTSDVEERSGSRTLQEFFEAGLLKPGDLLDPVDPDWIVDAVINEDGHLVIDGVNIFDSLDEATHSLGVTNLKGEEFWALEDGDDLVPLSKSSASS
>NZ_CP017639.1|WP_070361675.1|95674_97927_+|DEAD/DEAH-box-helicase
MSIPVTISYYEKLNVDGSLKSQVFDFGQKLMKDPTNPSLNIKTINNAVDKRVRTGRINKQFRAVLFELRDATTHHFVLVDVDSHDEGISKARRLDPAKLRLDVNPINGITTLIQETGPALDAAVPAAPAAAPSAPPTATSRPADALTAHGYTPDSLYTDLGIDPHFTQQVLDLATDADLDPLLATRPAWENEAMTGLLAGFSVDEVRDQLDLYVTSPADAPDPTDDSRVIAGLKQTAAALEFAYIGDGDTDALRNVIETGDFDKWRTFIHPEQRRMAKGDYKGSARVFGGAGTGKTVVALHRANNLITTRPQARILLTTYTRGLADGLKSQMTILNPTFPEATSPGAPGLYIENIDAIVRKILLDATTAEIEHATRSVLGVAAKAVKPYTDAQAQSVWDSVLFDADDALPTEIANQTFLAAEYETIVLAHGITTQAEYLRVARTGRGTPLNRKQRKLVWPLLESVLQTQAIDGKLLWPTMSAIGAAVLTVRGPIFDHVVVDEAQDFNAGHWHFLRASVAPGPNDIFLAEDSHQRIYGQPLVLSRFGISTRGRASRRLTLNYRTTRENLDYALRILDGSENAYIDGEGETDNTFGYRSARSGPEPTLVRCTDPTEEFDAAAHFIGTWLEEDPNARIGVMCRTRGQIPRILSGLRDHGIEAIQTKNADTAAHEQVSVMTMHGAKGMEFTHVVLMGVGRNILPQRFRLRGLAEAEVAHALQQERSLLYVAASRARDALLVTTHGEPSDLLPEV
>NZ_CP017639.1|WP_070361674.1|89309_95678_+|DEAD/DEAH-box-helicase
MSTLIPVHASNHVLEGVSEYLATTFSLASQDTSAALKAFLEDSKQGMFHGPYVRTRLPYARATGWEGLLGWLPDWFKPYHHQAQAFRRLRSLDEGGQRRPEPTLVITGTGSGKTEAFLYPVLDHARRMRAQGQRGVKALLLYPMNALANDQANRLATLLTEEAALAGVTAGIYTGEQAGSNVTKVSKKSLITSRQQIQQDPPDILLTNYKMLDQLLLRPADREIWRNSATSLQYIVLDEFHTYDGAQGTDVALLLRRLGLQLKKHQPAGFLSPEAAARPLGQVTPVATSATLGGEDEAHKVLGFAKTIFGETFNEDALVGETVLSYEQWRDEIAQAYGQAHTDAFVQVDADVIRGIVEKVAARVEAGEEYAATCLTVFRGELLHCADNLDATTAAFAAHPLTKAVLQASAHAIPLTQREGSAQDTLPHRVLDSQDQYLVRAVGEDTAAEFTTHALTVVSYLRALAGDAYGFEGKRLPGVETHLWVREVSRVDRAVTPVEDGHIFRWSDDGAVEETGDSAVWLPACYCRKCGRAGWMTSLEPGTDSPVFDVAKIRAGSIEDRSRQRALLDATNEYHQAQKRGTDFTTGGSGSDARALLWLHTGTRELSRTQPSEEALADGLSVPVLTFAGLEADELAQAQTCPSCGEAGSIRYIGSAVATLLSVGLSNLFGMADLESREKKTLVFADTVQDAAHRAGFVQSRSHAFGLRTFMHNAVGDEVLSLADVPRRMVEAADASGEKYRARYELLPAEIAHTPNFRAFWDPDADPQSRRASRTSALERIAFDVALEFGQRGDLPRSLAQTGALSVAVDVPDAVLESAGKVALDAVASPTTAMQDKRLRMQWLRGLLEQVRERGAINHPWLKQYLTNDGNAWFVNNRNAKSRGVPSFPRGGAPEFPRSGKKIDDKDRGITPLGSPRGRYAQWTEKVLGITPHDAATVLTTLFHELANRDVLTAIQTQSGGIMYALEPEQIILTQEAQPHVLECNVCNAHMALAATTRTLLTGMACTTQGCPGTFEQSAVPANYYRTLYTSKQVRSVVAAEHTGLIPKDERLALERIFRGDLASGTPAPDAPNVLVATPTLEMGIDIGDLSTVMLSSLPNSVANYVQRVGRAGRLTGNSLVLAFVRGRGASLPKLNQPLSVIAGSVEPPAAFLSATEILHRQITAYVIDSIDFDVLGIQLRQATSVFSPKARPAPLVDVLVEHQHDAHESNAWVDEFLGTLDAEHVDKETLEHAREWALGGGPDSMAGDLKRAQQRWEQHVRVYQERERVLDARWKELEKLNASNQDERHKDEDLERELRAVKSALRRVRRDLKELALDEHWVSAMERYGLLPNFALLDDSVELSVSVSTLNPSTLELEPEPFELTRGVASALQEFAPGATFYARGIAARIDSVELGDDASDVTAWRLCPACSYAEPADAREPGACPVCHSAAFADNGQCIDAVHLRKVSASVDRSQATIDGRSEHRVSTWFHSTMSFSVPEHGQGGAWYLSGGFGAEYLRVVDLSWFNLGNGHAVPRMFAGREIQAPLFTVCKHCGHLDSARGENSKWDHRPWCPQRNELNEDVMSVALARTLRTQGVLLHIPERFSAGDNTTIPSLAAAIRLGFKEVLGGDPDHLNVTPVKVPKESGGAVEALMLHDNVPGGTGYLSQFADPESVRNLLLRAYERVVSCTCAADDRLACPQCLLPYARPQQIEVTSRAAAQRALLSILADQDHPDPATDPASVTWDPQREAPTIDQGSQLEIRFRETLRQALEDRNAEITQRPTATSMEWHIRFPSGEQWVMNEQEDFGYTRPDFLFRHRSNRQVRSVALFTDGYAYHASPDVFRFASDMDKRARLATERYLPWTITHQDLNWFDAETKGTAEPPAWRDPRGMAQGGALPALDSQAMETIVSSPLTQLLHYLGNPRDKAFASYGEGLTVLLLARMFSAGSAPDGSVLRYLNDIELTFEQIGNRLLPTTLNIDVTGHSLPTELWNDYLRFSNLLYLSDEPVTVTTSESTSASVPAVPAGPTVPSGPEVGVDKPVADEVAPEWVEAIEEFEGEGAVTEALQKLAAAGASTNILVGEELEGLMTVVQWPERHVVVLYDAADAESPAEAALRRAGWTVLTPETITDDAMRKVMP
>NZ_CP017639.1|WP_070361672.1|88366_88930_-|hypothetical-protein
MLSTNGRISAKNSGNNSTQHFGDNNYYAQGPQKLQKTHIYKLLKLYSDANDESGSFDLTNLPSELEKKLTFKNVINQRRLFRTFAREFQLVDKVLDDVPNSETIIKSLERKYCLLMPPEPKWQQTPGAADKVLKELADHIQETVQNDPRFAALDLEVETVQHFCTALVEVGVSKCKVLEVPPKMSKR
>NZ_CP017639.1|WP_070361682.1|107216_107441_+|helix-turn-helix-transcriptional-regulator
MSPTPRSLGEQAREQRRAMRLTQADVADLSMVSERFIREFEQGKRSVRLDKVEAVLAVLGLDVVAVQHVPEALR
>NZ_CP017639.1|WP_070361683.1|107593_108955_+|hypothetical-protein
MSERATDPVPFSSEHQEVAADEFELENLTPADKREIRRTRRAPSPDGSTWSWAITLFGTAVGAGILFLPIDAGSFGFWPLLLATILVGPMVFFSHRMYSRIVSASPVKGLDVLQVITSLAGRKRGLATALMYWLAIYPIVLIYGVSVTNTMDSFIVNQMGGPHVDRWLLATICVGVMTGAYALGKKATLWFANLLVYPLIVALAAVSLYLIPYWDLESFMAYKSDVPLWKAMLFVLPVLVFSFSHMAAVSQSALDVQKSHDGDVAGTEKEVSKIELITCTLLVSFTMFFVWSCTLALGADGMAAVREENIPVLSYFANTTNAPFMAVVTPVVALCAIASSYFGHMLGTEEGTQYLLRAVAPKASEKWNPRAVRAGIYLFVFVSTVAVAIFNPSILDLISVVGGLFITLLVYIVPMLLFRHATAFRHYANQPEAIFVFGLGIVIICVTVWQMVA
>NZ_CP017639.1|WP_143000787.1|109091_109436_+|excisionase-family-DNA-binding-protein
MANPETFHDAVRGTFPPALASFIESILARVARGESVALSRPSEILTTTEAAEYLGISRPTLMKRIREGEIDYFKAGSHTRLRREDVVAYLQRCRARARHEFDAIRELDNEIEGL
>NZ_CP017639.1|WP_070361685.1|109432_110017_+|hypothetical-protein
MSIPVLFDANVWYLRTLTDWCFLLFLGSDKDVEPPFFPVWTEGIIAEAQYHLRRNNPHAPEGAISKRFKRIRGAVAEWEISGFAVGKYGYADIHDHHVLSAAVAGNVQYVVTSDRGLVDYVGSQQFLFDVVTPDDFFCHIFEAFPGLCKRVAQENEAYWEKVKGIKAADRPITAVMLERSGCPNFATVIDYVLR
>NZ_CP017639.1|WP_070361686.1|110238_111972_-|AAA-family-ATPase
MVTESAWDALPSYVRLALEAIHDGATADSQESLILEFKEDPTAREGKGGRAKLVEKLLNEAICMANSEAATGHIVVGVADRTPGAGAFTGTELGEEDIARRIFNGTKPNMNVQVTAVYAWGARLVVIHVPEARALYTRGDGAAKRRTADSQFSCQPMTEELRRAIDAARRDPDYSNDPADITVDDLQLPVIEEARRMLREHRRSRGSDAAVPQTTTGLLRELGLMRDDGQLKRAAEILLAQPNPTDVVVRHLWRSIPGQEPQATLISDPLLLALPRLRRLIAENGDREIERVQFADGEEVAISRFPSQAVDEAVSNAFIHRDWRLPGPVVVEQTNRTLKITSPGPLPPGVTVDTLLSTPSVPRNNRLMAAMRTLGLAEESSRGFDRMWTTMIRTGRSAPEVTATEANVQVVLAAQQPDTNFIKGLRKLSERFGEEVVDSVAALIVLWHLNSAPLITATTAAQKTQLTTLEVHELMDDLVARGLLDPVTDADEWTLSGEARKLLNLGQPGDLATVSVQEWIEAKLHDGAALQSADIADQTGVSVAEAGRILRHLRSLGRAKIDPDGPPRGRGTRWIRA
>NZ_CP017639.1|WP_070361687.1|112503_113460_+|diaminopimelate-dehydrogenase
MRVGIVGYGNLGKSVEQLVKLQPDMELSAIFSRRSKLDTDTRVLPVAEFGQYKDEIDVAILCLGSATDIPEQAPEFAKYVPTVDTYDNHRDIPRHRKAMDEVAREHNTVSIVSTGWDPGMFSLNRAMAEAILPNAQQHTFWGPGLSQGHSDAVRRIEGVAKGVQYTIPAPDALDRARRGETEGLDGKSAHKRVVYIVPEDGADTAAIEHTIRTMPDYFVGYEVEVNFIDDATFVREHSGMPHGGHVITTGGVGENHQLVEYTLELSSNPDFTGAVAVAYARAAARLAEDGKSGAFTVLEVPPYLLSPVALDDLIARDV
>NZ_CP017639.1|WP_070363404.1|113613_114387_+|hypothetical-protein
MAFVLAVLVAPSASAISVRGDAASPRSAVAVVHAGGGVEASRNGWEARPALSLSKLYLGYWVLYHGAPRHKAMVEEMVRTSSDGIASVLDAAYPQAIDAIARDFKLSATQRRGNWGLASTSAVDVARFVQAIRHDPVAAPLLRGMAHAAPVAADGFPQNYGTSRLPGVQGTKFGWADDRRSSTATVSYGAGFAVAVLTYGDVHANTVDAQRAVDTSVMPGPSGGRRVVDMLPPQTPNEIRNLVPKHWEVPAGSSVPW
>NZ_CP017639.1|WP_070361688.1|114556_116275_-|transcriptional-regulator
MQPGFHPLRQDLAEQVDAILATAAGGRVHRTTETQDVDFKEEAGRRNGPEIEPGAPRNPMAATKLADEVACMANTPGGGALIVGVEDKTGRIIGTELDVDWLRQEIYQRVQVAPSIEERVVEGQRLLILFVAASQQPVPNTSDQLRWRIGDSCKPVDLSEWWEYQRSQMNIDPMAQASDLGVEDVRPRALEIVRRQQEAFRELTDEELLRGLGALDANNNLTQAGVTLFAAAPRAVLELTIFDVHGGNVLNRVSGNAGTSALEQLEDIERALRIVNKNNTIVSGFVHQPIPQIPHSAVREALLNAMIHRDWNRQEPVDVRWIELDSTLIVRSPGPFMPAISAANVLSNREARYPALADLYRAIGLVDKQGVGVDRMYQSMITLGHRSPEIIEVPGPYIETTLVGGQPELPVLDLVSRIVPTPRQRDTRIAIILYLLFNHPFITRRSVAEALQSTEEAAELALTAAHQTTVNGEPLIRKHGDAWLLNETSRAVLRDHESPTSKPAWYLGTDPENARNVVLQWLSVFGEIRTADLVELCDISRSTATNLISGWEDDGLLVAVGGGRSRRYRKGE
>NZ_CP017639.1|WP_070363405.1|116936_117674_+|hypothetical-protein
MGDHAGRAIKLYKWDAEISAALWNLVALVEVVLRNKICEQAEIWSVQNNPRSNPDWILQPRQNVQEPLSKVSASISDPALNKAIKAKQIRDEGTGLTGGDHPRKGQPITKDDVISQVTLSQWKEYFFYREPIKAPDGSVQYYPDKVTYEFRKAIYQKITCEAFSALPDTDRIDPDDVSRIMNRVVLLRNRIGHQEPLIDINCAKSRDGLLILLKHLDSDVLNNYTASDPIPRILKADPRIRRGRR
>NZ_CP017639.1|WP_070361689.1|117926_118292_-|hypothetical-protein
MLGFDVGTSSSKAVLVASDGTMLGSETCEYPVSRTPDGFVSMVITGLRPHHTRRHMYRAVLEGTALAVRHNIELIEQSGLRIERIAGADGGLRANLWPQIVTDVTGRVQTRRKHHQRGVAR

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Crispr_ID: NZ_CP017639_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017639_4

517543-517691

Orphan

Consensus_repeat	Method
ACAGTCCGCCGCGCGGACACCCACCAACAAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP017639_4

>merge|NZ_CP017639|4|517543-517691|PILER-CR
ACAGTCCGCCGCGCGGATACCACTTCGTGATCTCTACCGCCGATTCCCGTATTCCGCCGCGCGGACACCCACTCACACACCCGTGCTCGAAGGTGGGCGTCGAAAAGCCAACCCCCACACTGTCCGCCGCGCGGACACCCACCAACAAA

>NZ_CP017639|4|2|517543-517691|PILER-CR
ACAGTCCGCCGCGCGGATACCACTTCGTGAT	CTCTACCGCCGATTCCCGTATTCCGCCGCG
CGGACACCCACTCACACACCCGTGCTCGAAG	GTGGGCGTCGAAAAGCCAACCCCCACACTGTCCGCCGCG
CGGACACCCACCAACAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017639.1\|WP_070361980.1\|530704_532441_+\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|238832
NZ_CP017639.1\|WP_070361976.1\|525289_525517_+\|glutaredoxin-like-protein-NrdH	unknown	unknown	gnl\|CDD\|131249
NZ_CP017639.1\|WP_143110076.1\|526175_528329_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236179
NZ_CP017639.1\|WP_018020497.1\|516245_516368_+\|50S-ribosomal-protein-L36	unknown	unknown	gnl\|CDD\|179138
NZ_CP017639.1\|WP_070361968.1\|512658_513141_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|223427
NZ_CP017639.1\|WP_070361974.1\|522652_524203_-\|phytoene-desaturase	unknown	unknown	gnl\|CDD\|274273
NZ_CP017639.1\|WP_070361969.1\|513133_513889_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|225547
NZ_CP017639.1\|WP_168156164.1\|511651_512623_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP017639.1\|WP_070361971.1\|514769_516131_+\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917
NZ_CP017639.1\|WP_084028544.1\|528353_529085_-\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP017639.1\|WP_070361973.1\|519003_522621_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214795
NZ_CP017639.1\|WP_070361975.1\|524199_525021_-\|phytoene/squalene-synthase-family-protein	unknown	unknown	gnl\|CDD\|173831
NZ_CP017639.1\|WP_145945233.1\|516437_517277_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276879
NZ_CP017639.1\|WP_084028543.1\|509751_511695_+\|type-I-pullulanase	unknown	unknown	gnl\|CDD\|273975
NZ_CP017639.1\|WP_070363445.1\|529340_530330_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
NZ_CP017639.1\|WP_070361977.1\|525586_526132_+\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	unknown	unknown	gnl\|CDD\|179603
NZ_CP017639.1\|WP_070361972.1\|517764_518985_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
NZ_CP017639.1\|WP_070361970.1\|513885_514734_-\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_CP017639.1\|WP_070361965.1\|508287_508758_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP017639.1\|WP_070361966.1\|508811_509540_+\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239270

Protein	Function_ID	Function_description	E-value
NZ_CP017639.1\|WP_070361980.1\|530704_532441_+\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|238832	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits in ubiquinol oxidase varies from two to five. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons from ubiquinol to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from ubiquinol on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. It is generally believed that the channels contain water molecules that act as 'proton wires' to transfer the protons. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are believed to be transferred directly from ubiquinol (the electron donor) to the low-spin heme, and directly from the low-spin heme to the binuclear center.	0
NZ_CP017639.1\|WP_070361976.1\|525289_525517_+\|glutaredoxin-like-protein-NrdH	gnl\|CDD\|131249	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.	4.28766e-32
NZ_CP017639.1\|WP_143110076.1\|526175_528329_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236179	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_CP017639.1\|WP_018020497.1\|516245_516368_+\|50S-ribosomal-protein-L36	gnl\|CDD\|179138	PRK00831, rpmJ, 50S ribosomal protein L36; Validated.	8.1784e-09
NZ_CP017639.1\|WP_070361968.1\|512658_513141_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.64005e-42
NZ_CP017639.1\|WP_070361974.1\|522652_524203_-\|phytoene-desaturase	gnl\|CDD\|274273	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP017639.1\|WP_070361969.1\|513133_513889_+\|phosphotransferase	gnl\|CDD\|225547	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown].	1.70989e-55
NZ_CP017639.1\|WP_168156164.1\|511651_512623_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	6.71235e-69
NZ_CP017639.1\|WP_070361971.1\|514769_516131_+\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.68479e-124
NZ_CP017639.1\|WP_084028544.1\|528353_529085_-\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.93132e-46
NZ_CP017639.1\|WP_070361973.1\|519003_522621_-\|hypothetical-protein	gnl\|CDD\|214795	smart00736, CADG, Dystroglycan-type cadherin-like domains. Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.	5.0441e-06
NZ_CP017639.1\|WP_070361975.1\|524199_525021_-\|phytoene/squalene-synthase-family-protein	gnl\|CDD\|173831	cd00683, Trans_IPPS_HH, Trans-Isoprenyl Diphosphate Synthases, head-to-head. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze a head-to-head (HH) (1'-1) condensation reaction. This CD includes squalene and phytoene synthases which catalyze the 1'-1 condensation of two 15-carbon (farnesyl) and 20-carbon (geranylgeranyl) isoprenyl diphosphates, respectively. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DXXXD) located on opposite walls. These residues mediate binding of prenyl phosphates. A two-step reaction has been proposed for squalene synthase (farnesyl-diphosphate farnesyltransferase) in which, two molecules of FPP react to form a stable cyclopropylcarbinyl diphosphate intermediate, and then the intermediate undergoes heterolysis, isomerization, and reduction with NADPH to form squalene, a precursor of cholestrol. The carotenoid biosynthesis enzyme, phytoene synthase (CrtB), catalyzes the condensation reaction of two molecules of geranylgeranyl diphosphate to produce phytoene, a precursor of beta-carotene. These enzymes produce the triterpene and tetraterpene precursors for many diverse sterol and carotenoid end products and are widely distributed among eukareya, bacteria, and archaea.	1.46867e-53
NZ_CP017639.1\|WP_145945233.1\|516437_517277_+\|hypothetical-protein	gnl\|CDD\|276879	cd14915, MYSc_Myh4, class II myosin heavy chain 4, motor domain. Myosin motor domain of skeletal muscle myosin heavy chain 4 (also called MYH2B, MyHC-2B, MyHC-IIb). Class II myosins, also called conventional myosins, are the myosin type responsible for producing actomyosin contraction in metazoan muscle and non-muscle cells. Myosin II contains two heavy chains made up of the head (N-terminal) and tail (C-terminal) domains with a coiled-coil morphology that holds the two heavy chains together. The intermediate neck domain is the region creating the angle between the head and tail. It also contains 4 light chains which bind the heavy chains in the "neck" region between the head and tail. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. Class-II myosins are regulated by phosphorylation of the myosin light chain or by binding of Ca2+. A cyclical interaction between myosin and actin provides the driving force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. CyMoBase classifications were used to confirm and identify the myosins in this hierarchy.	0.000813516
NZ_CP017639.1\|WP_084028543.1\|509751_511695_+\|type-I-pullulanase	gnl\|CDD\|273975	TIGR02104, pulA_typeI, pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.	0
NZ_CP017639.1\|WP_070363445.1\|529340_530330_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP017639.1\|WP_070361977.1\|525586_526132_+\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	gnl\|CDD\|179603	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI.	2.66262e-73
NZ_CP017639.1\|WP_070361972.1\|517764_518985_+\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	1.09532e-10
NZ_CP017639.1\|WP_070361970.1\|513885_514734_-\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	9.48741e-177
NZ_CP017639.1\|WP_070361965.1\|508287_508758_+\|hypothetical-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	0.000756372
NZ_CP017639.1\|WP_070361966.1\|508811_509540_+\|thioredoxin-domain-containing-protein	gnl\|CDD\|239270	cd02972, DsbA_family, DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.	1.04498e-06

>NZ_CP017639.1|WP_145945233.1|516437_517277_+|hypothetical-protein
MKRACCALLAVTALGACGTPTNDAPPTITVTSTTTHPNAQPPVPVDEPVGEVGVDKLLSTIADEVANQFGGTVAVAAGGVGSSDDPAMPAWSTIKVPLAVAAYRVAPDTAQLAAPAAITASDNDAALQLWNALPPGAGDTVLTEGGVPKTINTERIRPEFSTFGQTMLTAAEESTFMSNLSCLSDADPVLELMGQIVPGQDYGLGQLPNARFKGGWGPSETGGYEVRQMGLVSNSAEQDVALALVVVPADGSYQTGQAMANAVAERLRSQLDQLPVAVC
>NZ_CP017639.1|WP_018020497.1|516245_516368_+|50S-ribosomal-protein-L36
MKVRKSLRSLKNKPGAQVVRRRGKVYVLNKKEPRFKARQG
>NZ_CP017639.1|WP_070361971.1|514769_516131_+|sugar-porter-family-MFS-transporter
MQQLTTAQRSYVRKVAGVAALGGLLFGYDTGVMSGALLYITPEFQLTPGQEGLVTSMLLVGAAVGALSGGAIADRLGRKRTLIMGGLVFIAGSLWCALAGSVEALAAARTFLGVGVGGVSIVAPMYISEMVPARVRGKMVSLNTLMIVVGQLLAYSVNSALASTGSWQLMLGLAAVPGAALAVGMAFLPETPLWLARHQRIDAALTIGDRVGMTREELTLETTEDAELRAQRGGEWARLRNVRWLRMTVLIAALLGITQQVTGVNAIVYFAPTMMNKVGLSTENAVYTSMVIGLVSVVACWVGLQVIDRIGRKRLLLIGLSGNVIFLFALTLTYRAAENNAALAWVSLACMALFIASQQAAVSPTTWLLISELVPPQIRGAGMGLAGLALWVMNWIVAQFFLPLVDALSATATFSIFIICGILAAGFVRYFVPETMNRSLDEVASEMEQRYTK
>NZ_CP017639.1|WP_070361970.1|513885_514734_-|ammonia-dependent-NAD(+)-synthetase
MSRPDSPQVSSKQQEIIDTLGVQPSIDPAREIERRVAFLCDYARAASSAGFVLGISGGQDSTLAGRLAQIAVERLRDSGVDAHFLAVRLPHGVQVDEDDAQLALRFIEPDETVTVDIAPATKALSDEAADALGAPLSDFNKGNVKARLRMVAQYALAGERNLLVIGTDHAAENVTGFFTKFGDGAADLTPLAGLNKRQGAALLRELGADSRLWEKVPTADLEEDRPALPDEEALGVTYQHIDDYLEGNTVPSAAAERIEHLWRIGQHKRHLPPGPDTSWWKA
>NZ_CP017639.1|WP_070361969.1|513133_513889_+|phosphotransferase
MSDFSKRCIAPGQASSEAAGLRWLREGSDAVVEVCGVDEEQRTLRIERVETVRPTRDAARRAGEELAKIHAMGAEAFSAPPTGWDGPNFIGRVEQDCVPEQRWAKFYTEQRVLPFARAAHVAGNISKQQLELVERACAALVEEDEDAPLARIHGDLWAGNLLFDESGPRFIDPAAHGGHPLTDIAMLALFGAPFLEDIVAGYESRASLGEGWRRRIPIHQLHPLAVHALTHGPAYAGELANAAQATLDVAV
>NZ_CP017639.1|WP_070361968.1|512658_513141_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MYATSFATVETQVGTLTVVVSPRGVRRIALPTDDPAEVIHATGARPGPIGAVRGQLEEYFAGTRTSFDVPLDLEGLPPFRTKVLDALQHVPFGEVTTYKGLAVDVDNPGAVRAVGTACAKNPLPLLIPCHRVVRSDGHLGRYRGGEDMKRFLLALEGHLE
>NZ_CP017639.1|WP_168156164.1|511651_512623_-|RluA-family-pseudouridine-synthase
MTTYIPPPGYTAITVPEDHDGRRIHKFLAGHTTCPATMLFKLARKGALRVNQKRIKQDHRVRGGDVITLPGEFCKEAKRASKSKNHGFEMLWEGPTALVVNKPAGVPVHAGTGTRRGVIERIRDVYPDAELAHRIDKETSGALLITLNHAELRHLQRAFREQNVIRIYRAVVEGRWAGARDVKAPIARTPKTMVVSADGDDAHTRFRRVENRGPNTLVEAELITGRRHQIRVHAAHESHPIIGDRAYGSRTSAQRMFLHAYRLEFTLRNSERVVVTAPVREHTASVVRYQLRHSPAHAKTRVGVSLYRAFNARQMRPGLPGGP
>NZ_CP017639.1|WP_084028543.1|509751_511695_+|type-I-pullulanase
MSCVEGESAINYSNEFHEKYFYDGELGAIYTPEKTTFRVWAPTAKSVEFLNYSDNAAATPLARGERGIWELTLEGDRHGLEYRYRLEFGDGTVNEAVDPYARAVTANGEHTVVVDAEHIVPEGWSGKRMAPFSSMQDAIIYEAHVRDLTIGPDNGITHKGKFLGLTEAGTKTQAGNPSGLDYLKSLGITHLQLLPIYDFGSVDETGDLSFNAQYNWGYDPENYNVPEGSYSTHPQDPTARIMELKSMIDALHNNGIRVIMDVVYNHVYVAEHSPLQQTVPNYFFRTDPQGNFLDGTGVGNETASERPMMRKYIVDSVTYWATTYNIDGFRFDLMGIHDVDTMNAVREALNEIDPSIVILGEGWEMGNHPEGVLGANQKNADKLPGIAFFNDHYRDTVKGSNFELEHAGFVNGADQEHRSWDLLNNIKGAQHVRDYLGPEQSVVYNEAHDNYTMFDKLKGSMPHASDEEIARRHALATATQYLANGAVFIHAGQEFLRTKAGDHNSYKSPDEVNALDYDRAAQFAKHVQFFRDLNAFRKRYDFMRLPSYEAINSKYTHGIVAGADNVHMNHVGYTVKNAFPGNRDAFVYVNAATEPWQAPLPTGEYEVMIQATDVYETPRALTSHGDVTVPPLSIMVLRAAPVAFASH
>NZ_CP017639.1|WP_070361966.1|508811_509540_+|thioredoxin-domain-containing-protein
MTTRKVKNPNEKNGAGFIWAIVAVIAIAALVIGLIFVNGKKGREAAMAENMIDTTGITVSWNEDDHFIRLAAEDVDDAPMAELYEDFSCPHCADLAVATDEQMLEKLREGKIEVELRPMVTLDGLTNGHSTMGLAAELALVANDEPAAMMNLRDHLMVNQRDVYSKVTDDDLADLARDYGASDKAVQDIRDKTYYDAARAMSNGNLKLQQERGGEAGTPRVMVDGKDVEGEINNWVDTVANS
>NZ_CP017639.1|WP_070361965.1|508287_508758_+|hypothetical-protein
MTETHETKQARGKLLEIASAAARFGLAAVWIVAGWTKIGAHMEVAQNIIAYEIFTHEWSNILAQWIGPLELAGGLLLLAGIKLRECGWVSIGVLVLFIIGMYSAWSRGLVIDCGCFGPQPSDEGTNLIETILRDFVLIAATLFMIYVPYKKFAIYP
>NZ_CP017639.1|WP_070361972.1|517764_518985_+|HNH-endonuclease
MHTTIDADTIINAIVESARLFAYSHAEILTAIAEFDTHNLAEAYGCASTGAWLARVLKMKRTRAYEYAAVARKLTSFPTILDALRQGSIDYTSVRYMLDYATDTNQHELVEIAAESGYQGLVHALAGATPTDKQPQDAGEHCGLTIREDGQYLRGWFCMNATDGVAFQAALRAGAHAYADDNAMDEADAQMMRSTFGLPPARLMLQSLMGMVHMVRTGAATHATMAPAAQVMVHMTSDGRAFLPNHMAAPAARLANLVDHADLMGVLYDAQGQVIRFGRKRRLASPKQVQVLLGMWGHKCAVPGCGHTRFLQMHHIRDWAEGGATDIETLVPLCSRCHSLVTDGFIRVVKPGPVLYFRFVSGEQWVXEPXRVGYRDDAAEIELDGWGVDSFADEAAPTWDWDTPKV
>NZ_CP017639.1|WP_070361973.1|519003_522621_-|hypothetical-protein
MRSFRPGKTLIALFTAFAMSATVISPPDATAQTTSQWVPDQHEELFEQRDELSFSKGGAEYFCQVAHIADGRVYTDALCGEGHSLYYRDSEGSIHYFEDRQTDFSRNKDLFLNRFASYAIPDSLLPQVGESAEPILGSYLSAGNTVTVHGPREDYDATIENTTDGFLAITLPSHAYLTHGAPVSVGGRYLGMYESVFSNDDHRQGLVLLADPEVPPTSEPNKVALLLERESMLSYAPGEVSTINQGDKIFNNGHRCTVGYIDKPNSRIFLAGHCSDGGPLYFTDTQKRNYYLGTMVTEFDFEGSLTNSTMSKDWGYIDIPENRSALLGENRYSSDSVLLPSMLRVGQMVYGFGQTTGHVMENYVMGVINNVILLTQQNPMHEGDSGGPNWIVDDEGKKHFIGVNSGSDDVPEGQAHKYGIAVGWEETPTSNEYVNYSGLAMQQWDAYQKAQDEAENPVAVNQGDTVGLDDNDRDLFLDQECTAKYIDHVHQRIYTSPACTGPGGARGVSTTYGWPKHWALAEIGTFFDAHLPYIQAPDGTRLGENPDAPGELLSTGQVHLSDTASIDWRSMTVAGTVGDAILLLPDGDFEPEVNTPVTIGDDVAGLVSGIYYNENGNVKGIEVQSLLETNPIELPEGWQDNLLYEYAKATDKTAPVVEDVEKKEFDSDAEIEPFEFTITDEYNELTVEVTDLPEGLYADIQYDEPRLRATVTVRGTPTKPGWQYANVTARDALGNETSRNLEFWIADATAPVIDTTPLILEAGKYADLEIPVTDNSGYSPNVTVSALPDDLTSHEEHIHGQTNAVGTHDIHVTATDPAGNSATATIPLEVRDTKKPTINVRSNARWEANSEFNDSISIEVDDATPVDVRVEGLPRGLFYDESNRAIDGVTDAVGTHSITVIATDAGGNTSEAGLELIVEDTTSPTVQNAEFSSEVGSPFSYVVNATDSVGLKRVTVSGLPHGLRFDENSRTISGTPSSLGYFQAFVTASDRAGNTGDGVIEFRVVDTVLPRILVDHNPPAATKYDLPIRVEDATKTALSVTGLPAGLRHKGNRIVGSTKDSGTHRVVITATDEAGNQASETITLSVPKPRPAKTTTASKPSTSAPQKPKETTPAAEPPRQTPVPTKSTGKTTSSAAPSEKTTATTTQSEPPASDPTQPQVAEDGSASGSSKGGIAALVILGIIALVGGVVATNPQIMKQIQSMLP
>NZ_CP017639.1|WP_070361974.1|522652_524203_-|phytoene-desaturase
MTERVVIIGGGIAGLATACLLAKRGSTVVVVEKNGHLGGRADELRIDGFRFETGPSWYLMPEAYDHFFELMGTSTAAELDLQLLDPGYRIYPEHHPLLDVPFGTDAVADLFESLEPGAGDVLRDYLASAADVYNIALDRFLYTTFSSLRPFLHRDVVSRAFTLAVLLLQPLQRYVNKRFRDPRLRQILQYPAVFLSSQPRDTPSLYHLMSHTDLTLGVRYPQGGFSGIVTALERLARAHGVEFLLEHEATRIEVIDGSTTGIHMLSESGTRFLPADVVVAAGDLHHTETSLLPASARTYSEAHFKHHNPGVSCVLALIGVRGALPELLHHTLFFSEEWGEDFDAVFPADSSGSRDASRSIYVCKPSATDPTVAPAGCENLFVLIPVAADPSIGHGDAYGAAESPRVAAIVDATLDLIVARTGVADLRERVVVKRTIGPADFAGRYYSFAGGAIGPAHTLRQSAFFRGRNISAKVDNLYYAGQTTVPGVGVPMCLISAENVVKRMLGLRDASPIPKL
>NZ_CP017639.1|WP_070361975.1|524199_525021_-|phytoene/squalene-synthase-family-protein
MARRAASEVIGSYSTSFGAATRLLPEPQRTDIRNLYAVVRIADEIVDGAAPSPERAAALKDYEQRVRSATATTFHTDPILHAFADTARRCNFDDAHLAAFFTSMRHDVTGEAHTEESVERYIYGSAEVIGLLCVDVFFGGRRPPQAEYSKLQEGARALGAAFQKVNFLRDYADDTNRLARNYFPQASYPLTKAGRDAIIADIRHDFDAAWSAIPALPKRCGVAVAVAANLFEALTDLLADTPPEAILTERVRVSAPRKAAIIARTAATGRRLQ
>NZ_CP017639.1|WP_070361976.1|525289_525517_+|glutaredoxin-like-protein-NrdH
MSITVYTKPACMQCKATTKALEKAGLEYDLVDISVDDEARDYVLALGYLQAPVVEVNGEHWSGFRPERIRGLAAA
>NZ_CP017639.1|WP_070361977.1|525586_526132_+|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI
MLIVYFSSLTETTKRFVDKVRLPAQRIPLRRTDPAPIIDEPYVLICPTYGGGVSMTHVNTKPVPPQVIKFLNDEHNRSYIRGVIASGNSNFGTDYGLAGDVISEKCNVPYLFRFELLGTDDDVLRVRNQLIEHADRLGLLPLTPEQEDALESVGQLPGQENAQRLAQLREKYTNKYRNADR
>NZ_CP017639.1|WP_143110076.1|526175_528329_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MHGKNVPEPVNEADKLDYHTLNALLNLYDENGQIQFDKDREAANQFFLQHVNQNTVYFHDLEEKMKYLVDNKYYEPEVIEAYDWEFVKDTFKRAYAFKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVAMTALFLADGREEVASALVDEIMTGRFQPATPTFLNAGKAQRGELVSCFLLRIEDNMESIGRAINSSLQLSKRGGGVALLLSNIREAGAPIKHIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIMKFLDTKRENADEKIRIKTLSLGVVVPDITFELAKRNDDMYLFSPYDVERVYGVPFADISVTEKYEEMVEDPRIHKSKINARQFFQTLAEIQFESGYPYIMFEDTANRANPVKTGRINMSNLCSEILQVNSPSELNADLTYAKVGHDISCNLGSLNIAMAMDSDDFSRTVETAIRGLTAVADKTSIDSVPSIREGNDASHAIGLGQMNLHGFLGREHIHYGSEEGLDFTNAYFAAVMYECIKASHKIAVETGKKFEDFERSEYATGEFFDRYNPEDFQPKTEKVKALFEKSTIAVPTAEEWAALKEAVARDGIYNRYLQAIPPTGSISYINNSTSSIHPIASKIEIRKEGKIGRVYYPAPHLNNDNTEYFDDAYEIGFEKIVDTYAVATKYVDQGLSLTLFFKDTVTTRDLNRAQIYAWRKGIKSLYYIRLRQMALEGTEIEGCVSCML
>NZ_CP017639.1|WP_084028544.1|528353_529085_-|FadR-family-transcriptional-regulator
MNSMPLTLDPAESAEGPLLTKVLDELGGEIVSGTMAPGERFTLQDLSSRFGISRTVAREAMRALEQLGLVSSSRRVGIKVLPEAHWAVFDQAVIRWRLSSEAHRAKQIVSLDQLRKAVEPVAAALAATNATKEQAQELKALAEQLMELSEAGQGNTDAFLEADKRFHTLILECSGNEMFSTLTLPILYVLEGRTRYGIMPNDPHLDAMAYHLKVAEAIQSGDSTGAENASWSLLRGVDGFVEF
>NZ_CP017639.1|WP_070363445.1|529340_530330_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MTEEYLGYLQAHKEPMKAINWNEIPDEKDLEVWDRLTGNFWLPEKIPVSNDIPSWNTLTDDEQLSTMRVFANLTLLDTLQGTVGAVSLLPDAKTLHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWTEENKEVQRKAKIVESYYRGDDPMKKKVASVMLESFLFYSGFYLPLNWAVHSKLTNTADIIRLIIRDEAVHGYYIGYKYQVGLRDESPERQEELKEYAFDILYDLYENEIQYTEDIYDPLGWTEDVKRFLRYNANKALNNLGYEGLFPVDEARVSPAILASLSPNADENHDFFSGSGSSYVIGKAEETEDDDWDF
>NZ_CP017639.1|WP_070361980.1|530704_532441_+|cytochrome-c-oxidase-subunit-I
MTAVAPRLETKVQSTRPEPTGNGRIGSQIYKQLTTTDHKELGIMYIIMSFIWFFVGGLMALLIRAELFSPGLQFLSNEQFNQLFTMHGTVMLLAFGTPVVWGFANYVLPLQIGAPDVAFPRLNAFGFWITSVGVFAMLAGFLTPGGAADFGWTMYMPLADATHTPSVSANLWIVGVGATGIGTVASAINMLTTVLTMRAPGMTMFRMPAFTWTVFVTSIIALMIFPLLLAAALGVLYDRLLGGHIYDTANGGAILWQHLFWFFGHPEVYVLALPFFGIISEIIPVFSRKPMFGYIGLIFATLAIAGLSMAVWAHHMFATGAVLLPFFSFMTFLISVPTGVKFFNWVGTMWNGHITFETPMLWAMGFLFTFLFGGLTGIMLASPPLDFQLHDSYFVVAHFHYTLFGTVVFSAIAGVYFWFPKMTGRMLDERLGKIHFWFTFIGFNMTFLVQHWLGNMGMPRRYADYLDTDGFTLLNQISTVGSFILGIGMLPFIWNVIKSWRYGEIVTVDDPWGYGNSLEWATSCPPPRHNFTALPRIRSERPAFELHYPHMVEQLRREAHSNHKADTPATWKGTNSGK

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Crispr_ID: NZ_CP017639_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017639_5

2365049-2365139

Orphan

Consensus_repeat	Method
TGTCCGCCGCGCGGACACCCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017639_5

>merge|NZ_CP017639|5|2365049-2365139|CRISPRCasFinder
TGTCCGCCGCGCGGACACCCACCCACACACCCGTGCTCGAAAGTGGCGTCGCAAAGCACCCCGCGCACTGTCCGCCGCGCGGACACCCACC

>NZ_CP017639|5|4|2365049-2365139|CRISPRCasFinder
TGTCCGCCGCGCGGACACCCACC	CACACACCCGTGCTCGAAAGTGGCGTCGCAAAGCACCCCGCGCAC
TGTCCGCCGCGCGGACACCCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017639.1\|WP_084028640.1\|2352601_2353168_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236604
NZ_CP017639.1\|WP_084028641.1\|2359008_2359761_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239645
NZ_CP017639.1\|WP_070363644.1\|2362643_2362976_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224601
NZ_CP017639.1\|WP_070363391.1\|2361933_2362647_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP017639.1\|WP_070363390.1\|2361324_2361933_+\|YqgE/AlgH-family-protein	unknown	unknown	gnl\|CDD\|234694
NZ_CP017639.1\|WP_070363394.1\|2364193_2364637_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP017639.1\|WP_070363392.1\|2363068_2363500_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_070363643.1\|2359910_2361332_+\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|131739
NZ_CP017639.1\|WP_070363393.1\|2363520_2363862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017639.1\|WP_145945287.1\|2353236_2356545_-\|murein-biosynthesis-protein-MurJ	unknown	unknown	gnl\|CDD\|240528

Protein	Function_ID	Function_description	E-value
NZ_CP017639.1\|WP_084028640.1\|2352601_2353168_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236604	PRK09643, PRK09643, RNA polymerase sigma factor SigM; Reviewed.	7.84586e-42
NZ_CP017639.1\|WP_084028641.1\|2359008_2359761_-\|NUDIX-hydrolase	gnl\|CDD\|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	1.0045e-37
NZ_CP017639.1\|WP_070363644.1\|2362643_2362976_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|224601	COG1687, AzlD, Predicted branched-chain amino acid permeases (azaleucine resistance) [Amino acid transport and metabolism].	5.37376e-13
NZ_CP017639.1\|WP_070363391.1\|2361933_2362647_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	5.84668e-46
NZ_CP017639.1\|WP_070363390.1\|2361324_2361933_+\|YqgE/AlgH-family-protein	gnl\|CDD\|234694	PRK00228, PRK00228, YqgE/AlgH family protein.	1.23961e-60
NZ_CP017639.1\|WP_070363394.1\|2364193_2364637_-\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	0.00350597
NZ_CP017639.1\|WP_070363643.1\|2359910_2361332_+\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP017639.1\|WP_145945287.1\|2353236_2356545_-\|murein-biosynthesis-protein-MurJ	gnl\|CDD\|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.93128e-109

>NZ_CP017639.1|WP_070363394.1|2364193_2364637_-|hypothetical-protein
MKRFTSVAAAATLSLSLVAGPAFAAEAQPSDKDAKVGSSIAYAQCKAKAEAAEKEKEAKAKKKAAEAQTAGDLAKNKADQTRQEIREELTSSSDELDCVKELINDKDYKAGILGLLIGVPAALVALLGVVAAVSGVIPGIQLPALPF
>NZ_CP017639.1|WP_070363393.1|2363520_2363862_+|hypothetical-protein
MKRFATAAIAATTAFSLAVVPAQAGETSSGDEVTSSVAALTLLQIGKIGAAENEADAKKAIAEAEFGLAALQSSFDNDRERDWPIGRTFDIIWGSLLGVAALGGLAFLALNAK
>NZ_CP017639.1|WP_070363392.1|2363068_2363500_+|hypothetical-protein
MKRFATAAIAAATALSLAVVPAGAVNAGDKTPPGFGYDSSSKVSEDEAVGYAVLLAVAEFAKPGIGMSAPFKGSSEAGVFKTKAGENNKKSDAIILSSYKNDANNGYKLGTTYDILVGTGIAAAILALVGGIAAQQGLIQLPF
>NZ_CP017639.1|WP_070363644.1|2362643_2362976_+|branched-chain-amino-acid-ABC-transporter-permease
MNGLPAGVDLPMVWAVILPIAVVTVLLRALPFAFRGWLDGSPLLDFLRLYMPVGVMVVLVLYTFTSSDQPVWAGVLVGFVTLALHAWRRSPALSILAGTGLYVALVNLVL
>NZ_CP017639.1|WP_070363391.1|2361933_2362647_+|AzlC-family-ABC-transporter-permease
MNVSRETLRELGLGVRDMWLVGLGVVPLGLAFGLLMVQSGFAWWWTPVFSMLIYAGSTEFLAIPMVLGGVGPASAAMTGFMVNFRHLFYGLTYPRNAIRSTFGRLYSMYSLTDEAYAVISARQQTTRITGPRLIAIHVMCQALWVVSGLVGALAGERLPGTIEGMDFALTALFIVLAYEAFQASRDMSAVLIAAGIALVAAFVVPGQMLMVALIAYFLVLLVRFWVPGVDKRLEWKR
>NZ_CP017639.1|WP_070363390.1|2361324_2361933_+|YqgE/AlgH-family-protein
MPEYFFGDRLFTSLERTEPDSGMLLVAAPGMYSPEFARTVVLVIEHGEQGTLGVILNRRSDAAVVNVLPEWEALASEPPVMYYGGPVSPNAAVGLGVTHNDVDIAEHPMLTRLANKLVHVNMHEPADSFSELLEGFRLFAGFSSWDAGQLDEEIERGDWYVAPALPSDVITPAGVDLWADVLRRQPMPLPLFATFPSAIEDN
>NZ_CP017639.1|WP_070363643.1|2359910_2361332_+|CCA-tRNA-nucleotidyltransferase
MQVRAEEGVEKLSGLLTPLAQRFVERGEHLYLVGGPVRDAMLGKLGHDLDFTTSALPPTVQEILDEWGETTWDTGIEFGTVAAVREGQQVEITTFRSDLYDGVTRNPEVTFGDTLEGDLIRRDFACNAMAIELDVVDGALRPIFHDPVDGISDLLQRRLDTPQAPEISFRDDPLRMLRAARFASQLGFDVAPRVFDAMRDMAGEIQRITVERIQAELDKLMCGIAPWEGIDLLVRTGLAEFVLPEVPALQLEQDEHMQHKDVYAHSLTVLRQATELEDDGPDLKLRLAALLHDVGKPATRALKEGGGVSFHHHEVVGAKLVRKRLRALKYPKHVISDVGQLVFLHMRFYGFGEGKWTDSAVRRYVTDAGDLLGRLNKLVRADCTTRNPRKARRLQRAYQNLEERIATLAEQEDLARIRPDLDGNEIMQILDLKPGPEVGEAWKYMKELRLERGELEHDEAVAALKSWWEERNA
>NZ_CP017639.1|WP_084028641.1|2359008_2359761_-|NUDIX-hydrolase
MTENTRPKPVPPSERKSSNSGGKGRGDGANSKAGGDSPKRRRGRRRGSHAKKRGSQQQRRRGSNRRGRGASARKRQQRPVDSSLETRNETSAGGLVVSGMAEAVDRHDKVDLSKIYVALIGRLDRRGRLLWSMPKGHVEEGEEQWRTAEREVWEETGITGEAFNTLGVIDYWFISEGVRIHKTVHHNLLRYVDGVFNDEDPEVTEVAWVPMNQLIERLAYADERKLARIAVNRMPDLARKEAAAGRLTPR
>NZ_CP017639.1|WP_145945287.1|2353236_2356545_-|murein-biosynthesis-protein-MurJ
MVEQPRAGTRGRIVPPAPPAPVPTPRENPELIDATEAEAPDRSTLTADPSAAVPDPAPESNSVVRATGSMAIATLISRITGFIRTVLIGAALGPAVASAFNTANTLPNIITEIVLGSVLTALVVPVLVRAEKEDPDHGERFIRQLFTLTLTLLTVVTIIAVAAAPLLTRVFLDDEGQVNVAQSTSFAYLVLPQIFFYGMFSLFMAVLNTKEHFRPGAWAPVANNVVSIAVLLGYMMLPGSLNPAAPASIANPHVLLLGVGTTLGVAVQCLIMLPALRKLGINLRPLWGIDDRLKVFGGMALAIVTYVGISQVGYIVTTRIASMASDAAPIIYQQHWMLLQVPYGIIGVTLLTAIMPRLSRNAADGDDAAVVRDLTLGTKLTFIALIPIIVFMTALGPDIGHALFAYGNFDGGTARTLGLTVSFSAFTLIPYALVMLHLRVFYAREEAWTPTFIIAGITITKVVLSYLAPLVADSTQSVVVLLGAANGFGFVAGAVIGALLLRRKLGTLEARSVLHTSLWAAASALVGIAVMFLVRWLVRDVAGIDAPSFLGGLIGLPSLGFLLEVMVLGVLFVVATGLVLSRSGLPEVQNLGRALARIPGMGRFIRPDEDAAIEVGEVDLRDVSQQFLAADTFNASPVPPPMSAGVVRGPRLVPGASVSDGRFRLIRDHGSTTGAQFWQAREVSTGRSVALTFVDTTGMAPMAPATPRQAAIDAAGVSRRTRKLAMLRHPALPENIEIVSYRTGALVVADWVEGSSVRAVAESGQTLHTDAVANALAPLAGAIAAAHEAGVPLGLDNRQRLRIDREGHVRLAFPAVLPDASAADDADAFASALQLLTTNVDSDDLADVASTTRALVDADAIESHDFRELERQLTRDEAEDAPAEAIDPVEPVEEQSEEPKDLRGGFGSRRYGPVTLAVLLSLAVGAVIIIAALTAYLVGFLSGDDTNAPVTVDSVQTGVEEVEEEVTGLPVLLTPMRATIEGASAPELVDADRSTTWTGSDNVSVELRPAKGATARKGFTLEHVIVDTPSNGDSFRIYGLPAGASWNGDVADLPLLKEGTFLNGENGIDVEDSPELTGLVLNVSGQDIILRDVTLIGRTSLR
>NZ_CP017639.1|WP_084028640.1|2352601_2353168_-|sigma-70-family-RNA-polymerase-sigma-factor
MGGCIMRRKTDHQLVHEYIAGDIHAFNLIVRRHERNMLGVALRYSRNECDAEDIVQDALLKASRHLYGFRFESKVSTWLYRLVANASLDHQRRRKAEYTVSLDDNDELSQDKDPRLAHDPTAHLDRLIAVKDALRVVPEAHRKAVFLIDIMGMSLQSAADTCGVQPGTMKSRRARARAMMLEHMEGAC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP020577	Acinetobacter baumannii strain SSA12 plasmid pSSA12_1, complete sequence	72932-72964	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP012008	Acinetobacter baumannii strain Ab04-mff plasmid pAB04-2, complete sequence	22561-22593	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	CP033518	Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-2, complete sequence	48159-48191	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP032742	Acinetobacter baumannii strain C25 plasmid unnamed2	10725-10757	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP033857	Acinetobacter sp. FDAARGOS_493 plasmid unnamed1, complete sequence	62376-62408	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP008851	Acinetobacter baumannii strain AC29 plasmid pAC29b, complete sequence	40227-40259	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP023033	Acinetobacter baumannii strain 7847 plasmid pAba7847b, complete sequence	63929-63961	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	CP014292	Acinetobacter baumannii strain AB34299 plasmid unnamed1, complete sequence	21819-21851	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP027121	Acinetobacter baumannii strain AR_0056 plasmid unnamed2, complete sequence	35400-35432	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP020580	Acinetobacter baumannii strain SSMA17 plasmid pSSMA17_1, complete sequence	269-301	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP015366	Acinetobacter baumannii strain 3207 plasmid pAba3207b, complete sequence	63929-63961	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP017645	Acinetobacter baumannii strain KAB02 plasmid unnamed, complete sequence	13791-13823	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP020573	Acinetobacter baumannii strain 15A5 plasmid p15A5_1, complete sequence	73527-73559	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP020582	Acinetobacter baumannii strain JBA13 plasmid pJBA13_1, complete sequence	52091-52123	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP026712	Acinetobacter baumannii strain AR_0063 plasmid unitig_2_pilon, complete sequence	44056-44088	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP017647	Acinetobacter baumannii strain KAB03 plasmid unnamed, complete sequence	40579-40611	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP026706	Acinetobacter baumannii strain AR_0056 plasmid tig00000059_pilon, complete sequence	1097-1129	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP033245	Acinetobacter baumannii strain 7835 plasmid pAba7835b, complete sequence	63930-63962	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP021787	Acinetobacter baumannii strain A85 plasmid pA85-3, complete sequence	72944-72976	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_MG954379	Acinetobacter baumannii strain SGH0905 plasmid pS32-2, complete sequence	57442-57474	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP023028	Acinetobacter baumannii strain 10042 plasmid pAba10042b, complete sequence	75591-75623	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	MK531538	Acinetobacter baumannii strain MC23 plasmid pMC23.1, complete sequence	54046-54078	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP027243	Acinetobacter baumannii strain WCHAB005078 plasmid p1_005078, complete sequence	55704-55736	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_KY022424	Acinetobacter baumannii strain Ab8098 plasmid pAb8098, complete sequence	14886-14918	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP035052	Acinetobacter baumannii strain ABUH763 plasmid p74.1Kbp, complete sequence	60694-60726	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP017657	Acinetobacter baumannii strain KAB08 plasmid unnamed, complete sequence	20421-20453	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NC_025111	Acinetobacter baumannii strain D72 plasmid pD72-2, complete sequence	56705-56737	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_KF889012	Acinetobacter baumannii TYTH-1 plasmid pAB_CC, complete sequence	43383-43415	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NC_025109	Acinetobacter baumannii strain A85 plasmid pA85-3 clone GC1 AbaR4 resistance island, complete sequence	72945-72977	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP016302	Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb2-Ab66, complete sequence	26425-26457	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP016297	Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb2-Ab4, complete sequence	27320-27352	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NC_017163	Acinetobacter baumannii 1656-2 plasmid ABKp1, complete sequence	34189-34221	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP050392	Acinetobacter baumannii strain VB11737 plasmid pVB11737_1, complete sequence	56703-56735	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP050413	Acinetobacter baumannii strain PM192696 plasmid pPM192696_1, complete sequence	56701-56733	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP017649	Acinetobacter baumannii strain KAB04 plasmid unnamed, complete sequence	22554-22586	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP050404	Acinetobacter baumannii strain VB2486 plasmid pVB2486_1, complete sequence	85693-85725	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_LT984690	Acinetobacter baumannii isolate K50 plasmid I, complete sequence	66201-66233	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP029571	Acinetobacter baumannii strain DA33098 plasmid pDA33098-71, complete sequence	58270-58302	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP039994	Acinetobacter baumannii strain TG22182 plasmid pTG22182_1, complete sequence	56140-56172	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP014216	Acinetobacter baumannii strain YU-R612 plasmid unnamed1, complete sequence	40625-40657	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP017655	Acinetobacter baumannii strain KAB07 plasmid pKAB07, complete sequence	12931-12963	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP023030	Acinetobacter baumannii strain 9102 plasmid pAba9102a, complete sequence	77142-77174	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	CP040043	Acinetobacter baumannii strain VB958 plasmid unnamed3, complete sequence	68183-68215	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP050915	Acinetobacter baumannii strain DT-Ab007 plasmid unnamed1, complete sequence	78630-78662	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP050909	Acinetobacter baumannii strain DT-Ab022 plasmid unnamed2, complete sequence	57797-57829	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP008707	Acinetobacter baumannii strain AB5075-UW plasmid p1AB5075, complete sequence	70213-70245	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP017643	Acinetobacter baumannii strain KAB01 plasmid unnamed, complete sequence	5060-5092	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP030109	Acinetobacter baumannii strain DA33382 plasmid pDA33382-85, complete sequence	30563-30595	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP017651	Acinetobacter baumannii strain KAB05 plasmid unnamed, complete sequence	31725-31757	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	CP032137	Acinetobacter haemolyticus strain sz1652 plasmid unnamed2, complete sequence	48621-48653	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP020589	Acinetobacter baumannii strain 15A34 plasmid p15A34_1, complete sequence	6397-6429	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NC_010606	Acinetobacter baumannii ACICU plasmid pACICU2, complete sequence	51158-51190	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP042842	Acinetobacter baumannii strain ATCC BAA-1790 plasmid unnamed, complete sequence	11927-11959	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	CP007580	Acinetobacter baumannii AC30 plasmid pAC30c, complete sequence	31289-31321	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP019115	Acinetobacter baumannii strain MDR-CQ plasmid pMDR-CQ, complete sequence	30508-30540	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_KU549175	Acinetobacter baumannii strain C13 plasmid pC13-2 clone GC2, complete sequence	90474-90506	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_KX230794	Acinetobacter baumannii strain MAL plasmid pMAL-2, complete sequence	53628-53660	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP025267	Acinetobacter baumannii isolate SMC_Paed_Ab_BL01 plasmid pSMC_AB_BL01_1, complete sequence	327-359	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP020593	Acinetobacter baumannii strain USA2 plasmid pUSA2_1, complete sequence	52570-52602	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP020594	Acinetobacter baumannii strain USA15 plasmid pUSA15_1, complete sequence	14905-14937	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_KR535992	Acinetobacter baumannii strain A105 plasmid pA105-1, complete sequence	56701-56733	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	CP002524	Acinetobacter baumannii TCDC-AB0715 plasmid p2ABTCDC0715, complete sequence	16918-16950	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_KM977710	Acinetobacter baumannii strain D46 plasmid pD46-3, complete sequence	61519-61551	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP017653	Acinetobacter baumannii strain KAB06 plasmid unnamed, complete sequence	52110-52142	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_KF669606	Acinetobacter baumannii strain G7 plasmid pAb-G7-2 clone GC1 (global clone 1), complete sequence	56703-56735	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_MK386681	Acinetobacter baumannii strain ABAY09008 plasmid pABAY09008_1B, complete sequence	59148-59180	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP024578	Acinetobacter baumannii strain AbPK1 plasmid pAbPK1b, complete sequence	65942-65974	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_MK243454	Acinetobacter baumannii strain 09A16CRGN0014 plasmid pCRA914-67, complete sequence	53480-53512	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP019218	Acinetobacter baumannii strain XH731 plasmid pXH731, complete sequence	21183-21215	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_MG954377	Acinetobacter baumannii strain SGH9601 plasmid pS21-2, complete sequence	57606-57638	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP038264	Acinetobacter baumannii strain LEV1449/17Ec plasmid pEC_gr6, complete sequence	44399-44431	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP035047	Acinetobacter baumannii strain ABUH793 plasmid p74.1Kbp, complete sequence	60694-60726	7	0.788
NZ_CP017639_2	2.8\|35224\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35224-35256	33	NZ_CP045419	Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence	512182-512214	7	0.788
NZ_CP017639_2	2.52\|37908\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37908-37940	33	MG941013	Actinomyces phage xhp1, complete genome	14607-14639	7	0.788
NZ_CP017639_2	2.10\|35346\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35346-35378	33	NZ_CP017058	Citrobacter freundii strain SL151 plasmid unnamed1, complete sequence	91178-91210	8	0.758
NZ_CP017639_2	2.10\|35346\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35346-35378	33	NZ_CP029730	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed2, complete sequence	65452-65484	8	0.758
NZ_CP017639_2	2.10\|35346\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35346-35378	33	NZ_CP026552	Citrobacter sp. SL156 plasmid unnamed3	12286-12318	8	0.758
NZ_CP017639_2	2.24\|36200\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	36200-36232	33	NZ_CP044329	Methylocystis rosea strain BRCS1 plasmid unnamed1, complete sequence	195026-195058	8	0.758
NZ_CP017639_2	2.24\|36200\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	36200-36232	33	NZ_CP034087	Methylocystis rosea strain GW6 plasmid pGW6_1, complete sequence	174550-174582	8	0.758
NZ_CP017639_2	2.33\|36749\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	36749-36781	33	MH552499	Podoviridae sp. isolate ctcf755, complete genome	36656-36688	8	0.758
NZ_CP017639_2	2.37\|36993\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	36993-37025	33	NZ_CP045326	Mycobacterium sp. THAF192 plasmid pTHAF192_a, complete sequence	61165-61197	8	0.758
NZ_CP017639_2	2.64\|38640\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	38640-38672	33	NZ_CP009405	Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p78K, complete sequence	42761-42793	8	0.758
NZ_CP017639_2	2.64\|38640\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	38640-38672	33	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	387799-387831	8	0.758
NZ_CP017639_2	2.6\|35102\|33\|NZ_CP017639\|CRISPRCasFinder,CRT	35102-35134	33	KF147891	Pseudomonas phage PaBG, complete genome	20213-20245	9	0.727
NZ_CP017639_2	2.29\|36505\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	36505-36537	33	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	50208-50240	9	0.727
NZ_CP017639_2	2.38\|37054\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37054-37086	33	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	18642-18674	9	0.727
NZ_CP017639_2	2.47\|37603\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37603-37635	33	KC292022	Halovirus HRTV-5, complete genome	680-712	9	0.727
NZ_CP017639_2	2.50\|37786\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37786-37818	33	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	105126-105158	9	0.727
NZ_CP017639_2	2.53\|37969\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37969-38001	33	NZ_CP019890	Enterobacter hormaechei strain FRM plasmid unnamed1, complete sequence	95592-95624	9	0.727
NZ_CP017639_2	2.53\|37969\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37969-38001	33	NC_049851	Burkholderia phage BcepSauron, complete genome	156382-156414	9	0.727
NZ_CP017639_2	2.53\|37969\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37969-38001	33	NC_049850	Burkholderia phage BcepSaruman, complete genome	156502-156534	9	0.727
NZ_CP017639_2	2.54\|38030\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	38030-38062	33	NC_008757	Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence	330534-330566	9	0.727
NZ_CP017639_2	2.19\|35895\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	35895-35927	33	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	608327-608359	10	0.697
NZ_CP017639_2	2.27\|36383\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	36383-36415	33	NC_008712	Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence	67673-67705	10	0.697
NZ_CP017639_2	2.38\|37054\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37054-37086	33	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2459390-2459422	10	0.697
NZ_CP017639_2	2.39\|37115\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37115-37147	33	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1847090-1847122	10	0.697
NZ_CP017639_2	2.39\|37115\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37115-37147	33	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1763293-1763325	10	0.697
NZ_CP017639_2	2.39\|37115\|33\|NZ_CP017639\|CRISPRCasFinder,CRT,PILER-CR	37115-37147	33	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1763294-1763326	10	0.697

1. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP020577 (Acinetobacter baumannii strain SSA12 plasmid pSSA12_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

2. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP012008 (Acinetobacter baumannii strain Ab04-mff plasmid pAB04-2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

3. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to CP033518 (Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

4. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP032742 (Acinetobacter baumannii strain C25 plasmid unnamed2) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

5. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP033857 (Acinetobacter sp. FDAARGOS_493 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

6. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP008851 (Acinetobacter baumannii strain AC29 plasmid pAC29b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

7. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP023033 (Acinetobacter baumannii strain 7847 plasmid pAba7847b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

8. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to CP014292 (Acinetobacter baumannii strain AB34299 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

9. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP027121 (Acinetobacter baumannii strain AR_0056 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

10. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP020580 (Acinetobacter baumannii strain SSMA17 plasmid pSSMA17_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

11. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP015366 (Acinetobacter baumannii strain 3207 plasmid pAba3207b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

12. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017645 (Acinetobacter baumannii strain KAB02 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

13. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP020573 (Acinetobacter baumannii strain 15A5 plasmid p15A5_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

14. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP020582 (Acinetobacter baumannii strain JBA13 plasmid pJBA13_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

15. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP026712 (Acinetobacter baumannii strain AR_0063 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

16. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017647 (Acinetobacter baumannii strain KAB03 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

17. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP026706 (Acinetobacter baumannii strain AR_0056 plasmid tig00000059_pilon, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

18. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP033245 (Acinetobacter baumannii strain 7835 plasmid pAba7835b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

19. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP021787 (Acinetobacter baumannii strain A85 plasmid pA85-3, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

20. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_MG954379 (Acinetobacter baumannii strain SGH0905 plasmid pS32-2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

21. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP023028 (Acinetobacter baumannii strain 10042 plasmid pAba10042b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

22. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to MK531538 (Acinetobacter baumannii strain MC23 plasmid pMC23.1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

23. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP027243 (Acinetobacter baumannii strain WCHAB005078 plasmid p1_005078, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

24. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_KY022424 (Acinetobacter baumannii strain Ab8098 plasmid pAb8098, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

25. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP035052 (Acinetobacter baumannii strain ABUH763 plasmid p74.1Kbp, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

26. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017657 (Acinetobacter baumannii strain KAB08 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

27. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NC_025111 (Acinetobacter baumannii strain D72 plasmid pD72-2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

28. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_KF889012 (Acinetobacter baumannii TYTH-1 plasmid pAB_CC, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

29. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NC_025109 (Acinetobacter baumannii strain A85 plasmid pA85-3 clone GC1 AbaR4 resistance island, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

30. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP016302 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb2-Ab66, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

31. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP016297 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb2-Ab4, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

32. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NC_017163 (Acinetobacter baumannii 1656-2 plasmid ABKp1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

33. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP050392 (Acinetobacter baumannii strain VB11737 plasmid pVB11737_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

34. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP050413 (Acinetobacter baumannii strain PM192696 plasmid pPM192696_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

35. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017649 (Acinetobacter baumannii strain KAB04 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

36. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP050404 (Acinetobacter baumannii strain VB2486 plasmid pVB2486_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

37. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_LT984690 (Acinetobacter baumannii isolate K50 plasmid I, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

38. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP029571 (Acinetobacter baumannii strain DA33098 plasmid pDA33098-71, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

39. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP039994 (Acinetobacter baumannii strain TG22182 plasmid pTG22182_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

40. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP014216 (Acinetobacter baumannii strain YU-R612 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

41. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017655 (Acinetobacter baumannii strain KAB07 plasmid pKAB07, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

42. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP023030 (Acinetobacter baumannii strain 9102 plasmid pAba9102a, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

43. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to CP040043 (Acinetobacter baumannii strain VB958 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

44. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP050915 (Acinetobacter baumannii strain DT-Ab007 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

45. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP050909 (Acinetobacter baumannii strain DT-Ab022 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

46. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP008707 (Acinetobacter baumannii strain AB5075-UW plasmid p1AB5075, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

47. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017643 (Acinetobacter baumannii strain KAB01 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

48. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP030109 (Acinetobacter baumannii strain DA33382 plasmid pDA33382-85, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

49. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017651 (Acinetobacter baumannii strain KAB05 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

50. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to CP032137 (Acinetobacter haemolyticus strain sz1652 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

51. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP020589 (Acinetobacter baumannii strain 15A34 plasmid p15A34_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

52. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NC_010606 (Acinetobacter baumannii ACICU plasmid pACICU2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

53. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP042842 (Acinetobacter baumannii strain ATCC BAA-1790 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

54. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to CP007580 (Acinetobacter baumannii AC30 plasmid pAC30c, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

55. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP019115 (Acinetobacter baumannii strain MDR-CQ plasmid pMDR-CQ, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

56. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_KU549175 (Acinetobacter baumannii strain C13 plasmid pC13-2 clone GC2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

57. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_KX230794 (Acinetobacter baumannii strain MAL plasmid pMAL-2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

58. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP025267 (Acinetobacter baumannii isolate SMC_Paed_Ab_BL01 plasmid pSMC_AB_BL01_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

59. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP020593 (Acinetobacter baumannii strain USA2 plasmid pUSA2_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

60. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP020594 (Acinetobacter baumannii strain USA15 plasmid pUSA15_1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

61. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_KR535992 (Acinetobacter baumannii strain A105 plasmid pA105-1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

62. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to CP002524 (Acinetobacter baumannii TCDC-AB0715 plasmid p2ABTCDC0715, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

63. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_KM977710 (Acinetobacter baumannii strain D46 plasmid pD46-3, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

64. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017653 (Acinetobacter baumannii strain KAB06 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

65. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_KF669606 (Acinetobacter baumannii strain G7 plasmid pAb-G7-2 clone GC1 (global clone 1), complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

66. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_MK386681 (Acinetobacter baumannii strain ABAY09008 plasmid pABAY09008_1B, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

67. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP024578 (Acinetobacter baumannii strain AbPK1 plasmid pAbPK1b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

68. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_MK243454 (Acinetobacter baumannii strain 09A16CRGN0014 plasmid pCRA914-67, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

69. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP019218 (Acinetobacter baumannii strain XH731 plasmid pXH731, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

70. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_MG954377 (Acinetobacter baumannii strain SGH9601 plasmid pS21-2, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

71. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP038264 (Acinetobacter baumannii strain LEV1449/17Ec plasmid pEC_gr6, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

72. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP035047 (Acinetobacter baumannii strain ABUH793 plasmid p74.1Kbp, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaaggaactcga	CRISPR spacer
taaaaggagctaatcaatgattaagaaacatca	Protospacer
  ****************** ****.*** . *

73. spacer 2.8|35224|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP045419 (Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence) position: , mismatch: 7, identity: 0.788

gcaaaggagctaatcaatgagtaa-ggaactcga	CRISPR spacer
gcaaaggagctaaacaatgactaaccgggcacg-	Protospacer
************* ****** ***  *..* **

74. spacer 2.52|37908|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to MG941013 (Actinomyces phage xhp1, complete genome) position: , mismatch: 7, identity: 0.788

---ggcctacaccctcgaggaggctatcgctgaccc	CRISPR spacer
ttcggc---gaccgtcgaggaggctgtcgctgacgc	Protospacer
   ***    *** ***********.******** *

75. spacer 2.10|35346|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP017058 (Citrobacter freundii strain SL151 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

cacaccctg------ggcggcgttgtggtcaatgatggt	CRISPR spacer
------ctggagggtggcggcgttgtgggctatgatggt	Protospacer
      ***      ************* * ********

76. spacer 2.10|35346|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP029730 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

cacaccctg------ggcggcgttgtggtcaatgatggt	CRISPR spacer
------ctggagggtggcggcgttgtgggctatgatggt	Protospacer
      ***      ************* * ********

77. spacer 2.10|35346|33|NZ_CP017639|CRISPRCasFinder,CRT matches to NZ_CP026552 (Citrobacter sp. SL156 plasmid unnamed3) position: , mismatch: 8, identity: 0.758

cacaccctg------ggcggcgttgtggtcaatgatggt	CRISPR spacer
------ctggagggtggcggcgttgtgggctatgatggt	Protospacer
      ***      ************* * ********

78. spacer 2.24|36200|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044329 (Methylocystis rosea strain BRCS1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttctggttttccctcgcatggtggacgcacatt	CRISPR spacer
gggtcggtctccctagcatggcggacgcacatt	Protospacer
   * * *.***** ******.***********

79. spacer 2.24|36200|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034087 (Methylocystis rosea strain GW6 plasmid pGW6_1, complete sequence) position: , mismatch: 8, identity: 0.758

ttctggttttccctcgcatggtggacgcacatt	CRISPR spacer
gggtcggtctccctagcatggcggacgcacatt	Protospacer
   * * *.***** ******.***********

80. spacer 2.33|36749|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to MH552499 (Podoviridae sp. isolate ctcf755, complete genome) position: , mismatch: 8, identity: 0.758

gtttggcaagcaggtttctcattgttctctttc	CRISPR spacer
acttctaaagcaggtttcccattgttgtcttta	Protospacer
..**   ***********.******* *****

81. spacer 2.37|36993|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045326 (Mycobacterium sp. THAF192 plasmid pTHAF192_a, complete sequence) position: , mismatch: 8, identity: 0.758

aacgcctcaaccatgtcgcgcaccaagtactgg	CRISPR spacer
aggacctccaccatgtcccgcaccaagtcatcg	Protospacer
*. .**** ******** **********  * *

82. spacer 2.64|38640|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009405 (Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p78K, complete sequence) position: , mismatch: 8, identity: 0.758

gccctcgccggtatcgagtgggcgggcccaaat	CRISPR spacer
cctggcgccggtatcgattgggtgggcccaaga	Protospacer
 *.  ************ ****.********.

83. spacer 2.64|38640|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 8, identity: 0.758

gccctcgccggtatcgagtgggcgggcccaaat	CRISPR spacer
ctcctcgccggtatcgaggcggcgggcatccat	Protospacer
 .****************  ******* .  **

84. spacer 2.6|35102|33|NZ_CP017639|CRISPRCasFinder,CRT matches to KF147891 (Pseudomonas phage PaBG, complete genome) position: , mismatch: 9, identity: 0.727

cggcgttgtccgccttgtgcgtaatgacaccgc	CRISPR spacer
tgcaatgttccgccttgtgcgtaaggacaacgt	Protospacer
.*  .*  **************** **** **.

85. spacer 2.29|36505|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.727

ctcatgtgtgacggggtgaagatcgccgaccgg	CRISPR spacer
gccagacccgacggggtgaagatcgccagccgg	Protospacer
 .** .. .******************..****

86. spacer 2.38|37054|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 9, identity: 0.727

tctgctccggcttgccgctcttgcgagccttag	CRISPR spacer
ctgtcgtcggcttccggctcttgcgagccttcg	Protospacer
..  * .****** * *************** *

87. spacer 2.47|37603|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to KC292022 (Halovirus HRTV-5, complete genome) position: , mismatch: 9, identity: 0.727

ccaccctgctcgatatacaccccacgatgagaa	CRISPR spacer
ccaccctgctcgatgtagaccccatctccacac	Protospacer
**************.** ******.  . * *

88. spacer 2.50|37786|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 9, identity: 0.727

ctcaatcgccgccgcattcgacttcttcgtctc	CRISPR spacer
cgaggccggcgccgccttcgacttcttcgtcga	Protospacer
*  ...** ****** ***************

89. spacer 2.53|37969|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019890 (Enterobacter hormaechei strain FRM plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

caggtcgtcgcgtgacctggctgaccagctcaa	CRISPR spacer
atggtcatcccgtgacctggctgacccgtgctg	Protospacer
  ****.** **************** *. * .

90. spacer 2.53|37969|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NC_049851 (Burkholderia phage BcepSauron, complete genome) position: , mismatch: 9, identity: 0.727

caggtcgtcgcgtgacctggctgaccagctcaa	CRISPR spacer
tggaacactgcgtgatctggctgaccagatcaa	Protospacer
..*. *...******.************ ****

91. spacer 2.53|37969|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NC_049850 (Burkholderia phage BcepSaruman, complete genome) position: , mismatch: 9, identity: 0.727

caggtcgtcgcgtgacctggctgaccagctcaa	CRISPR spacer
tggaacactgcgtgatctggctgaccagatcaa	Protospacer
..*. *...******.************ ****

92. spacer 2.54|38030|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NC_008757 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence) position: , mismatch: 9, identity: 0.727

cgccagcgcaacggcaacgttttcatttcatga	CRISPR spacer
cgccagcgcaacggccaccttttccccggtgga	Protospacer
*************** ** ***** ..    **

93. spacer 2.19|35895|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 10, identity: 0.697

ccaggggtcggcgcaggggctgacccgcaatgt	CRISPR spacer
gagcgggtcggcgcaggggcggaccggcgcctt	Protospacer
  . **************** **** **. . *

94. spacer 2.27|36383|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NC_008712 (Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence) position: , mismatch: 10, identity: 0.697

ccacttgcgcaggatgcgcccataattctgtct	CRISPR spacer
agtgatgcgcaggatgcggccatcattctggtg	Protospacer
     ************* **** ****** .

95. spacer 2.38|37054|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

tctgctccggcttgccgctcttgcgagccttag	CRISPR spacer
gctgctcgcgcttgccgctcttgcgccagccgg	Protospacer
 ******  ****************    ...*

96. spacer 2.39|37115|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.697

ccaacaacgcgaacgccgtgactatcggattcg	CRISPR spacer
aacacaacgcgagcgccgtgacgatcgagtggt	Protospacer
   *********.********* ****..*

97. spacer 2.39|37115|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ccaacaacgcgaacgccgtgactatcggattcg	CRISPR spacer
aacacaacgcgagcgccgtgacgatcgagtggt	Protospacer
   *********.********* ****..*

98. spacer 2.39|37115|33|NZ_CP017639|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ccaacaacgcgaacgccgtgactatcggattcg	CRISPR spacer
aacacaacgcgagcgccgtgacgatcgagtggt	Protospacer
   *********.********* ****..*

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017639

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection