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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP014944 Colwellia sp. PAMC 20917 chromosome, complete genome 11 crisprs WYL,DinG,cas14k,RT,DEDDh,cas3,cas2,cas1,csx1,cas6,csm3gr7,csx10gr5,cas10,cas14j,csa3 4 4 6 0

Results visualization

1. NZ_CP014944
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_1 688324-688428 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_2 1015751-1015829 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_3 1150010-1151649 NA
23 spacers
cas2,cas1,DinG,csx1,cas6,csm3gr7,csx10gr5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_4 1211400-1211617 TypeV NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_5 1925943-1926167 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_6 2070617-2070724 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_7 2259312-2259428 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_8 2605493-2605627 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_9 3777813-3777953 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_10 3914245-3914315 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014944_11 4120559-4120670 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP014944_3 3.1|1150046|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150046-1150079 34 NZ_CP014944.1 1055310-1055343 0 1.0
NZ_CP014944_5 5.2|1926089|43|NZ_CP014944|PILER-CR 1926089-1926131 43 NZ_CP014944.1 1926262-1926304 0 1.0
NZ_CP014944_3 3.21|1151443|33|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151443-1151475 33 NZ_CP014944.1 2841012-2841044 1 0.97
NZ_CP014944_10 10.1|3914268|25|NZ_CP014944|CRISPRCasFinder 3914268-3914292 25 NZ_CP014944.1 3914316-3914340 2 0.92

1. spacer 3.1|1150046|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to position: 1055310-1055343, mismatch: 0, identity: 1.0

ccgctagtggcgatgtgttgtttgctgtgtcgag	CRISPR spacer
ccgctagtggcgatgtgttgtttgctgtgtcgag	Protospacer
**********************************

2. spacer 5.2|1926089|43|NZ_CP014944|PILER-CR matches to position: 1926262-1926304, mismatch: 0, identity: 1.0

caagagtgcacatcagaccctgcaactatcgaccagatagcct	CRISPR spacer
caagagtgcacatcagaccctgcaactatcgaccagatagcct	Protospacer
*******************************************

3. spacer 3.21|1151443|33|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to position: 2841012-2841044, mismatch: 1, identity: 0.97

ctggctgttgcgtaataccgaacagctttcctc	CRISPR spacer
ctggctgttacgtaataccgaacagctttcctc	Protospacer
*********.***********************

4. spacer 10.1|3914268|25|NZ_CP014944|CRISPRCasFinder matches to position: 3914316-3914340, mismatch: 2, identity: 0.92

taaagcagataaaaaaggtaagtgc	CRISPR spacer
taaagcagacaaaaaaggtaaatgc	Protospacer
*********.***********.***

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP014944_10 10.1|3914268|25|NZ_CP014944|CRISPRCasFinder 3914268-3914292 25 CP040041 Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence 258849-258873 3 0.88
NZ_CP014944_10 10.1|3914268|25|NZ_CP014944|CRISPRCasFinder 3914268-3914292 25 GU943068 Uncultured phage MedDCM-OCT-S05-C849 genomic sequence 6236-6260 5 0.8
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NZ_CP017078 Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence 86606-86639 6 0.824
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 NZ_CP026267 Aminobacter sp. MSH1 plasmid pBAM2, complete sequence 44053-44086 6 0.824
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 NC_047815 Erwinia phage vB_EamM_Yoloswag, complete genome 162323-162356 7 0.794
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 MN693200 Marine virus AFVG_25M319, complete genome 19234-19267 7 0.794
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 MN694484 Marine virus AFVG_250M1201, complete genome 38469-38502 8 0.765
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 KJ019094 Synechococcus phage ACG-2014e isolate Syn7803US33, complete genome 72779-72812 9 0.735
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 KJ019156 Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome 72775-72808 9 0.735
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 KJ019054 Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome 72870-72903 9 0.735
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 NZ_CP028348 Novosphingobium sp. THN1 plasmid pTHN, complete sequence 897548-897581 9 0.735
NZ_CP014944_3 3.9|1150604|33|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150604-1150636 33 AP014927 Ralstonia phage RSF1 DNA, complete genome 12646-12678 10 0.697
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AP012531 Stx2-converting phage Stx2a_F422 proviral DNA, complete genome 28519-28552 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_004813 Enterobacteria phage BP-4795, complete genome 25484-25517 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682385 Escherichia phage PA33, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682382 Escherichia phage PA29, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682389 Escherichia phage PA45, complete genome 30638-30671 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682383 Escherichia phage PA30, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_000924 Enterobacteria phage 933W, complete genome 27206-27239 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_049924 Stx2-converting phage Stx2a_F451 proviral DNA, complete genome 34515-34548 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_004914 Stx2 converting phage II DNA, complete genome 59899-59932 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682375 Escherichia phage PA11, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682387 Escherichia phage PA42, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AF125520 Bacteriophage 933W, complete genome 27206-27239 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KJ909655 Escherichia Stx1-converting recombinant phage HUN/2013, complete genome 49665-49698 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KU238068 Stx converting phage vB_EcoS_P32, complete genome 27613-27646 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682384 Escherichia phage PA32, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682386 Escherichia phage PA36, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682376 Escherichia phage PA12, complete genome 26692-26725 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AP000422 Enterobacteria phage VT2-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7 28562-28595 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682391 Escherichia phage PA51, complete genome 26692-26725 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682388 Escherichia phage PA44, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682372 Escherichia phage PA4, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_011356 Enterobacteria phage YYZ-2008, complete prophage genome 25684-25717 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682377 Escherichia phage PA16, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_000902 Enterobacteria phage VT2-Sakai, complete genome 26674-26707 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 HM208303 Stx2 converting phage vB_EcoP_24B, complete genome 27331-27364 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AP000363 Enterobacteria phage VT2-Sakai proviral DNA, complete genome 26674-26707 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AP012536 Stx2-converting phage Stx2a_1447 proviral DNA, complete genome 23883-23916 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 FJ184280 Enterobacteria phage YYZ-2008, complete genome 25684-25717 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682380 Escherichia phage PA27, complete genome 29325-29358 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AP005153 Stx1 converting phage DNA, complete genome 57059-57092 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682379 Escherichia phage PA21, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682373 Escherichia phage PA5, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682378 Escherichia phage PA18, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KU238069 Stx converting phage vB_EcoS_P22, complete genome 27604-27637 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682390 Escherichia phage PA50, complete genome 28012-28045 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_049941 Stx2-converting phage Stx2a_WGPS2 proviral DNA, complete genome 25196-25229 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AJ556162 Phage BP-4795 complete genome 25484-25517 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_010237 Enterobacteria phage Min27, complete genome 28885-28918 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 KP682392 Escherichia phage PA52, complete genome 29325-29358 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AP012529 Stx2-converting phage Stx2a_F403 proviral DNA, complete genome 28905-28938 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 NC_049917 Escherichia phage Lys12581Vzw, complete genome 13354-13387 10 0.706
NZ_CP014944_3 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1150743-1150776 34 AP000400 Enterobacteria phage VT1-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7 32088-32121 10 0.706
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 MF431616 Lentibacter virus vB_LenP_VB2, complete genome 9162-9195 10 0.706
NZ_CP014944_3 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT 1151304-1151337 34 NC_048671 Lentibacter virus vB_LenP_ICBM2, complete genome 9162-9195 10 0.706

1. spacer 10.1|3914268|25|NZ_CP014944|CRISPRCasFinder matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

taaagcagataaaaaaggtaagtgc	CRISPR spacer
taaagcatatgaaaaaggtaagtgg	Protospacer
******* **.************* 

2. spacer 10.1|3914268|25|NZ_CP014944|CRISPRCasFinder matches to GU943068 (Uncultured phage MedDCM-OCT-S05-C849 genomic sequence) position: , mismatch: 5, identity: 0.8

taaagcagataaaaaaggtaagtgc	CRISPR spacer
gaaagcagctaaaaaaggtaagaaa	Protospacer
 ******* ************* . 

3. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017078 (Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence) position: , mismatch: 6, identity: 0.824

gtgat-accgcgagcgtggtggatgaactcaacca	CRISPR spacer
-tgatgaccgcgagcgtggtcgatgagctcactga	Protospacer
 **** ************** *****.**** . *

4. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026267 (Aminobacter sp. MSH1 plasmid pBAM2, complete sequence) position: , mismatch: 6, identity: 0.824

gagttaactctggtgctggtgctgctgtatttgt	CRISPR spacer
gagcgcaatctcgtgccggtgctgctgtatttgt	Protospacer
***.  * *** ****.*****************

5. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 7, identity: 0.794

gagttaactctggtgctggtgctgctgtatttgt	CRISPR spacer
ctgttaactcaggtgctggtgctgctgcaaaagt	Protospacer
  ******** ****************.*   **

6. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to MN693200 (Marine virus AFVG_25M319, complete genome) position: , mismatch: 7, identity: 0.794

gagttaact--ctggtgctggtgctgctgtatttgt	CRISPR spacer
--gtttacctgctggtgctggtgctggtttatttgg	Protospacer
  *** **.  *************** * ****** 

7. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to MN694484 (Marine virus AFVG_250M1201, complete genome) position: , mismatch: 8, identity: 0.765

gagttaa---ctctggtgctggtgctgctgtatttgt	CRISPR spacer
---ctaaaatgtctgttgctggtgctgttgtattttt	Protospacer
   .***    **** ***********.******* *

8. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KJ019094 (Synechococcus phage ACG-2014e isolate Syn7803US33, complete genome) position: , mismatch: 9, identity: 0.735

gagttaactctggtgctggtgctgctgtatttgt	CRISPR spacer
tagttaactctggtgttggtgctggtggagcatc	Protospacer
 **************.******** ** * .  .

9. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KJ019156 (Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome) position: , mismatch: 9, identity: 0.735

gagttaactctggtgctggtgctgctgtatttgt	CRISPR spacer
tagttaactctggtgttggtgctggtggagcatc	Protospacer
 **************.******** ** * .  .

10. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KJ019054 (Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome) position: , mismatch: 9, identity: 0.735

gagttaactctggtgctggtgctgctgtatttgt	CRISPR spacer
tagttaactctggtgttggtgctggtggagcatc	Protospacer
 **************.******** ** * .  .

11. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 9, identity: 0.735

gagttaactctggtgctggtgctgctgtatttgt	CRISPR spacer
gccttcaatctggtgctggtgctgctggtggtga	Protospacer
*  ** * *******************    ** 

12. spacer 3.9|1150604|33|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AP014927 (Ralstonia phage RSF1 DNA, complete genome) position: , mismatch: 10, identity: 0.697

atgcgaagatagatttgattgttgcgaacatag	CRISPR spacer
atgccaagacagatttgattgttggccgtgtta	Protospacer
**** ****.**************   ...* .

13. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AP012531 (Stx2-converting phage Stx2a_F422 proviral DNA, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

14. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_004813 (Enterobacteria phage BP-4795, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

15. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682385 (Escherichia phage PA33, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

16. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682382 (Escherichia phage PA29, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

17. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682389 (Escherichia phage PA45, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

18. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682383 (Escherichia phage PA30, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

19. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_000924 (Enterobacteria phage 933W, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

20. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_049924 (Stx2-converting phage Stx2a_F451 proviral DNA, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

21. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_004914 (Stx2 converting phage II DNA, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

22. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682375 (Escherichia phage PA11, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

23. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682387 (Escherichia phage PA42, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

24. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AF125520 (Bacteriophage 933W, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

25. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KJ909655 (Escherichia Stx1-converting recombinant phage HUN/2013, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

26. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KU238068 (Stx converting phage vB_EcoS_P32, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

27. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682384 (Escherichia phage PA32, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

28. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682386 (Escherichia phage PA36, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

29. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682376 (Escherichia phage PA12, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

30. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AP000422 (Enterobacteria phage VT2-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

31. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682391 (Escherichia phage PA51, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

32. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682388 (Escherichia phage PA44, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

33. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682372 (Escherichia phage PA4, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

34. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_011356 (Enterobacteria phage YYZ-2008, complete prophage genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

35. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682377 (Escherichia phage PA16, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

36. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_000902 (Enterobacteria phage VT2-Sakai, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

37. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to HM208303 (Stx2 converting phage vB_EcoP_24B, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

38. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AP000363 (Enterobacteria phage VT2-Sakai proviral DNA, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

39. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AP012536 (Stx2-converting phage Stx2a_1447 proviral DNA, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

40. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to FJ184280 (Enterobacteria phage YYZ-2008, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

41. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682380 (Escherichia phage PA27, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

42. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AP005153 (Stx1 converting phage DNA, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

43. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682379 (Escherichia phage PA21, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

44. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682373 (Escherichia phage PA5, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

45. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682378 (Escherichia phage PA18, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

46. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KU238069 (Stx converting phage vB_EcoS_P22, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

47. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682390 (Escherichia phage PA50, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

48. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_049941 (Stx2-converting phage Stx2a_WGPS2 proviral DNA, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

49. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AJ556162 (Phage BP-4795 complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

50. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_010237 (Enterobacteria phage Min27, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

51. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to KP682392 (Escherichia phage PA52, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

52. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AP012529 (Stx2-converting phage Stx2a_F403 proviral DNA, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

53. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_049917 (Escherichia phage Lys12581Vzw, complete genome) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

54. spacer 3.11|1150743|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to AP000400 (Enterobacteria phage VT1-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7) position: , mismatch: 10, identity: 0.706

gtgataccgcgagcgtggtggatgaactcaacca	CRISPR spacer
cccgtaaaatgagcgtgatggaagaactcaacca	Protospacer
 . .**  ..*******.**** ***********

55. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to MF431616 (Lentibacter virus vB_LenP_VB2, complete genome) position: , mismatch: 10, identity: 0.706

gagttaactctggtgctggtgctgctgtatttgt	CRISPR spacer
gtcctaactcttgtgctagtgctgctgtagcgtc	Protospacer
*  .******* *****.*********** .  .

56. spacer 3.19|1151304|34|NZ_CP014944|PILER-CR,CRISPRCasFinder,CRT matches to NC_048671 (Lentibacter virus vB_LenP_ICBM2, complete genome) position: , mismatch: 10, identity: 0.706

gagttaactctggtgctggtgctgctgtatttgt	CRISPR spacer
gtcctaactcttgtgctagtgctgctgtagcgtc	Protospacer
*  .******* *****.*********** .  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 104283 : 162694 49 Vibrio_phage(22.22%) integrase,holin,transposase,tRNA attL 99710:99724|attR 116469:116483
DBSCAN-SWA_2 540223 : 581303 28 Hokovirus(33.33%) integrase,protease,transposase attL 568850:568866|attR 583745:583761
DBSCAN-SWA_3 1351766 : 1365043 9 uncultured_Mediterranean_phage(28.57%) NA NA
DBSCAN-SWA_4 1968117 : 2043897 72 Virus_Rctr41k(23.08%) integrase,protease,transposase,tRNA attL 1980007:1980066|attR 2002760:2002781
DBSCAN-SWA_5 2918137 : 2982135 48 Bacillus_phage(28.57%) integrase,transposase attL 2953392:2953407|attR 2992174:2992189
DBSCAN-SWA_6 4210817 : 4312478 77 Leptospira_phage(15.38%) integrase,protease,transposase,tRNA attL 4231923:4231939|attR 4272425:4272440
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage