CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017580	Curtobacterium sp. BH-2-1-1 chromosome, complete genome	7 crisprs	cas3,DEDDh,csa3,WYL,RT	0	2	0	0

Cas Category Instructions

Results visualization

1. NZ_CP017580

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017580_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017580_1

140422-140752

Orphan

Consensus_repeat	Method
GGCGGCACCGGACGGATCACCGTGTCGTCGA	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP017580_1

>merge|NZ_CP017580|1|140422-140752|CRISPRCasFinder
GCGCGACCGGGCCGCAGCACCGTGTCGTCGAGCGAACCGGTCGCCGGAGCGACCCGCGCACCCGGCACGGGCGGCACCGGACGGATCACCGTGTCGTCGATGTCCTGCGCTTCCGAGACGCCGTGCACCACCGGCGCGGCCGGCAACGGCGGCACCGGGCGGATCACCGTGTCGTCGACCGAGTCGGCGGTCGGAGCGCCCGGGAGTCGGGACGCACCGGGGACTGGCGGGACCGGACGGATCACGGTGTCGCCCAACAGGTCGTCCACCGACGCGTGCACCGGTTCGTTGGACGCGGCGGCGCGGGGTCGACGGACGACCGTGTCGTCGA

>NZ_CP017580|1|1|140422-140752|CRISPRCasFinder
GCGCGACCGGGCCGCAGCACCGTGTCGTCGA	GCGAACCGGTCGCCGGAGCGACCCGCGCACCCGGCACG
GGCGGCACCGGACGGATCACCGTGTCGTCGA	TGTCCTGCGCTTCCGAGACGCCGTGCACCACCGGCGCGGCCGGCAAC
GGCGGCACCGGGCGGATCACCGTGTCGTCGA	CCGAGTCGGCGGTCGGAGCGCCCGGGAGTCGGGACGCACCGGGGACT
GGCGGGACCGGACGGATCACGGTGTCGCCCA	ACAGGTCGTCCACCGACGCGTGCACCGGTTCGTTGGACGCGGCG
GCGCGGGGTCGACGGACGACCGTGTCGTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017580.1\|WP_139202004.1\|140822_141380_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070416291.1\|147461_148025_-\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NZ_CP017580.1\|WP_156794714.1\|141488_142262_-\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|234999
NZ_CP017580.1\|WP_070416290.1\|146664_147459_-\|F0F1-ATP-synthase-subunit-delta	unknown	unknown	gnl\|CDD\|237387
NZ_CP017580.1\|WP_070416281.1\|130573_131545_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP017580.1\|WP_156794713.1\|131643_137496_-\|tandem-95-repeat-protein	unknown	unknown	gnl\|CDD\|238020
NZ_CP017580.1\|WP_083294950.1\|122421_122967_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|224678
NZ_CP017580.1\|WP_070416288.1\|144025_144928_-\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|235535
NZ_CP017580.1\|WP_092387300.1\|139034_139820_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP017580.1\|WP_070416277.1\|122931_123924_+\|asparaginase	unknown	unknown	gnl\|CDD\|377601
NZ_CP017580.1\|WP_083294951.1\|129161_130577_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP017580.1\|WP_022905458.1\|142258_142522_-\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184055
NZ_CP017580.1\|WP_070416292.1\|148034_148271_-\|ATP-synthase-F0-subunit-C	unknown	unknown	gnl\|CDD\|169138
NZ_CP017580.1\|WP_070419070.1\|148338_149151_-\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|235617
NZ_CP017580.1\|WP_156794712.1\|124825_126670_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP017580.1\|WP_070416289.1\|144928_146557_-\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NZ_CP017580.1\|WP_070416283.1\|137492_138905_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP017580.1\|WP_070416278.1\|123956_124727_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_022905457.1\|142523_143978_-\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NZ_CP017580.1\|WP_070416280.1\|126666_129165_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376628

Protein	Function_ID	Function_description	E-value
NZ_CP017580.1\|WP_070416291.1\|147461_148025_-\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	3.77162e-43
NZ_CP017580.1\|WP_156794714.1\|141488_142262_-\|peroxide-stress-protein-YaaA	gnl\|CDD\|234999	PRK02101, PRK02101, peroxide stress protein YaaA.	1.18728e-47
NZ_CP017580.1\|WP_070416290.1\|146664_147459_-\|F0F1-ATP-synthase-subunit-delta	gnl\|CDD\|237387	PRK13430, PRK13430, F0F1 ATP synthase subunit delta; Provisional.	2.18482e-72
NZ_CP017580.1\|WP_070416281.1\|130573_131545_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	9.87647e-88
NZ_CP017580.1\|WP_022905458.1\|142258_142522_-\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184055	PRK13442, atpC, F0F1 ATP synthase subunit epsilon; Provisional.	1.24512e-31
NZ_CP017580.1\|WP_083294950.1\|122421_122967_-\|OsmC-family-protein	gnl\|CDD\|224678	COG1764, osmC, Organic hydroperoxide reductase [Secondary metabolites biosynthesis, transport and catabolism].	3.26128e-17
NZ_CP017580.1\|WP_070416288.1\|144025_144928_-\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	6.77767e-126
NZ_CP017580.1\|WP_092387300.1\|139034_139820_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	8.53022e-59
NZ_CP017580.1\|WP_070416277.1\|122931_123924_+\|asparaginase	gnl\|CDD\|377601	pfam06089, Asparaginase_II, L-asparaginase II. This family consists of several bacterial L-asparaginase II proteins. L-asparaginase (EC:3.5.1.1) catalyzes the hydrolysis of L-asparagine to L-aspartate and ammonium. Rhizobium etli possesses two asparaginases: asparaginase I, which is thermostable and constitutive, and asparaginase II, which is thermolabile, induced by asparagine and repressed by the carbon source.	1.44135e-105
NZ_CP017580.1\|WP_156794713.1\|131643_137496_-\|tandem-95-repeat-protein	gnl\|CDD\|238020	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.	9.9876e-10
NZ_CP017580.1\|WP_070416292.1\|148034_148271_-\|ATP-synthase-F0-subunit-C	gnl\|CDD\|169138	PRK07874, PRK07874, ATP synthase F0 subunit C.	2.04986e-21
NZ_CP017580.1\|WP_070419070.1\|148338_149151_-\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	6.24453e-50
NZ_CP017580.1\|WP_156794712.1\|124825_126670_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	2.74799e-09
NZ_CP017580.1\|WP_070416289.1\|144928_146557_-\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_CP017580.1\|WP_070416283.1\|137492_138905_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.57564e-68
NZ_CP017580.1\|WP_083294951.1\|129161_130577_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	6.92913e-28
NZ_CP017580.1\|WP_022905457.1\|142523_143978_-\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_CP017580.1\|WP_070416280.1\|126666_129165_-\|hypothetical-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	1.50896e-05

>NZ_CP017580.1|WP_092387300.1|139034_139820_-|serine/threonine-protein-phosphatase
MDVPGADGATLTLSWGAATDVGRRRDHNEDSYIVGAPFFVVADGMGGHLAGDRASDAVVRRLEQATESAFTTRQSIQRALLLATADIERAAGGNAIGAGTTVTGIALVAAQGQPAALVFNVGDSRTYRIEGGVLRRVTVDHSVVQEMVDAGLLRAEDAERHPDSNVITRAVGFGEPPEPDWWTLPLRAGDRYIVCSDGLTKELGDAGIARIAARVPAAQDLAERLVGDAVVAGGRDNVTVVVLQVDDAPDDGDVEDTLPRH
>NZ_CP017580.1|WP_070416283.1|137492_138905_-|serine/threonine-protein-kinase
MARRLPSTPPVIAGFSPVHVLGSGGFADVFLYEQDMPRRQVAVKILLDEVVDDRVRQMFQAEANLMARLSTHPSILTVFQASVASDGRPYLVMELCSSSLSERYRREPIPVSEVLAIGIRIGSALETAHREGVLHRDIKPSNILLTAYGNPVLSDFGIAATIGEADPDEPIGMSIPWSAPEVLIDESRGTVQSEVYSLAATVFSLLAGRSPFEVRGGKNGAADLMGRIDKGGVKPTGRTDVPPSLERLLASAMSRKVAGRPSTVMELVRGFQQVEAELGIPQTSADVAVEAWAVATPTPHGDRTMIRELQPPTRVGARRRTRKALQGGSAGAAAQSVGTVHRTGSVTRARRRTRSTLVWATSIAVVVVAALAVATVLVIGRLGSGAIPVVADVRAEPSPSSVTFTWADPGLRTGDTYVISSNGAASQQTGTSFVVSGQKGDEECIAVAVNRDGKTGVASAQKCATIGSAG
>NZ_CP017580.1|WP_156794713.1|131643_137496_-|tandem-95-repeat-protein
MIRAFLEKHRSAAVTVGASVVVGAVVATAAIASTGYHTQRVDLGDGTVWVPSAEYGAVGRANTGVLQLNTAVETASDDLSVLQRGSTVYSVDETKGTVAKVDVADATVADPVTLPAGTPQVFFAGSTAVIGNGDTGELWATPAKDLGEFDASTKADLTLGADAVFDASDDHVAVYSPKTGTAALVDVGTTPTVAKRWTVKMDRADDFQVASFGDHLAVLDRSSGRMSVDGRTVDLGDRVGSAPALQHSTDSSSEVVVAGTAGLVRVSASGDVSNTAMQVSGRAARPMVVGSCTYAAWAGGQAIDTCKGSGLQRLASTAGTGDLQILHNGETVVANDPQSGRAWAIDRSGQLIDNWADLIKKDEDQRQEQVSDDDPEVEKDQKPPVAVDDDLGARPGRTTSLPVLLNDYDPNGDPIVVSEVGKIDDAVGDVAIVGDGQRLQITLSGRATGTVSFPYTITDGNGGSDTATVRVTVRPDSENDPPRQVRDTSADVVQNGHVVSNVLGDWVDPDGDPVYLKSATAADGDRVSTTPDGLLDYRNASARTGDRAVQLVVSDGRADGRGSVTVHVAKQGSVPLYADPFPVQGYAGKAFTVDPLDHVRGGNGTVTLTSVSSSTGLTVTPSYDSGTFRVQGAGAGDHQLEYTVTDGTKTTSGIVRVTILAPPDASTAPITTPKTVFVNTLSTKDTDVTATDIDPAGGVLLVTALDGPGRGSGVEASILDQHTVRVTLTAPLDGPVSFGYTETNGLASATGTITVVEIPKPDRIQPPVAQPDTATVRVGDVANIDVLDNDTQPEGEPLTLQPDLVQNVPGDGGLLFVSGDHLRYLAPKTPGNYTAVYRVAGPDGQYADATVSISVREQDAATNNPPVPQTVTARVVAGQSVRVSIPLNGIDPDGDSVQLVGVASNPDKGSVADVSSDSLTYEAGDYSAGTDEFTYTVVDALGARATGTVRVGIAPRAEQASNPVAEADHVTIRPGGSVTVRVLQNDSDPEGGQLTVTKAEPTAESVSAKILQKQQIRVTPPKTAKNGDYAVLYTVTNENGGASTAFLTVTVDPDAQPLRPEVDDTTLDLQDILHRQSVTVDVLENVFFAEGTTADLKVGVVDGYGDNARTTDDGRIVVRLSDDSQVIPFSVARVDHPDIVSYGFIHVPGFDDALPQVNRTAGAITVKSEATVRIPLSKYVVTANGQTAKITDRGTVKATHANGQSLVVDSSTLQFTSSKLYYGNASISFEVTDGSNANGGKGRVATLVLPVKVTPRSNQPPAFTGSAVDMQPGESRTIDLSKLTDYPYPQDLPELKYSVVSKPSDGTTATISGQNLTIKVADTAKKNTSASIGIGVADDANAGRSGVVSVDVVASTRPLVQPGADKSVTKRGQTTTIDVLANDQPTNPFPGQRLRVVNIRGLGGGLPGGVTVTPSADKSRLQVSVSDSAKPVDTHLQYQVADATDDPDRYVWGDVTISVQDVPDAPGAPTRTGSYEGGQATLTWSTPQANNSPITGYRLQGTNGVSKDCGTATVCTIKGLDPKGSYQFSVVATNAVGDSAASANSAPISADFVPAPPTGISVTPSKSTPNQLDVTWNAVAAPNNGSAVDNYVVSIEGPDLSTTRSTGTATNTSFTGAQSGAQYTVTVSARNGADRNGTVVQWNSASATGSAVGVPGKPTNVSAVAGKNPDRDGKSSVTITWSAADLAGGTSGSYNAFRGAQSDCTARGSLGQTSPASDSGVGGGTATYSVTVWNGYFCNAQTTTTQTYERPSGTSTPAVFLTSDSSSTPDVVVAAPTTPVDHYQLEVGGAPITLQPGQRWSGVPGDGARNVAVAMTLRACGSPGSNFCTTDDGSSYTANIAALDATSSVTSAQLTKSITVSGPTSSAVSVRYTAYWYSTDDGSGFPRTDSWDAGAAAPQPPDDLLFTAKSVRVRAEVTFNDNGALTTNGDYSPLAAVAPAPADSGNAAGN
>NZ_CP017580.1|WP_070416281.1|130573_131545_-|MoxR-family-ATPase
MSMTPEQATWFADVAGRIVTNVEQVLLGKTFVIRLAVTAMLSEGHLLLEDVPGTGKTSLARAMAQSVQGSTNRIQFTPDLLPGDITGISVYDQKTQEFDFHRGPIFSNIVLADEINRASPKTQSALLEAMEESAVTVDGVNHRLAAPFMVIATQNPVEQAGTYRLPEAQLDRFLMKASIGYPDHAATVKILETSSAPSSSVPLASVVPAATITEMATLARSVHVDPVIADYVARLVDATRSASEVRLGVSVRGAMGLMRASRVFAALAGRHYVTPDDVKALAVPILAHRLVLDAEAEFDGVSATSVIAQLLVETPPPADRAGS
>NZ_CP017580.1|WP_083294951.1|129161_130577_-|DUF58-domain-containing-protein
MTDRRPVSTRSRRPSSTRSRRGSTAYERTGTVAGLTNVRTRLVGDRDGVAADAVVGLARAWSTAWRLVKRGWAEVSSVVTGLGWTVAALTLVAFVLGYRFGLREVVVVGFAGALLVVVAAVALIGRSRLVIRMRLPQHRVAVGDAAGVVVTAENPVRFPSVPTTVEVPVGSGLVDVAIPSIGPRGTFEREVPVPTVRRGVLDVGPVTGVRADPVGLVRREIVWTAREQVIVHPRTIAIPSTSTGLVRDLEGQATTDLSPSDIAFHAIREYMPGDDPRTIHWKSTAKSGALMVRQFEDTRRSHLVVALGLSRAEFADDEEFELAVSAAASLGARAIRDGREVTVVVSERTPEFAKRPVYAVHPLPTVTPTRLLDDFASVGLADACLPIAEVARIVGTDTAGISVAFLVVGSTVELPALRLAATRFPVGVEVVAVICEPEAQPRFLRVAGLTVMTIGYLDDLRHALHRSASAA
>NZ_CP017580.1|WP_070416280.1|126666_129165_-|hypothetical-protein
MSVAAGPDTRARKTVRRDARRVARRLSPFRLVGGTLAVWLVLAVASVAWWPVYRDDAMIVAAVTAVVFGTLVALLGTVFRLPTAVVAVATVAAFALTGVPAAVPGEANGILPTGQGLVDLFAGVALGWKQLVTISLPVGSYESLLVPYFATLLVATVTGVSVATRASRQELASIPALVVFAAGVVVGPGRLDTSIVTAVALTGIALVWALTVRHARRAVAVATTIGSRVPVARSVIRPALVGTGTIVAAAVVATGLGLVAPPSVGRTVARTDVVKPFDPRDYVSPLSGFRAYEEDTASNTPQLTVTGLPENGFVRIATLDTYDGVVYRVGGSDGSTASGTFERVPTSVDVRGVEGTTVRVGVRVDGYSGVWLPTVGDLERVEFTGSGAEKERGAFFYNGSTATGAVVGGVGDGTRYDLTAVVPDQPTDEQLASARPGSASVPTPRSVPDAVRDTVDAYSGDADTDGAKLVAMVQALKRNGYVSHGVGDDRASRSGHGADRIQELLTSPLMIGDQEQYAAAAALMADQLGFPARVVMGFTAGGDAGGGAGRSATSGGTTTFRGSDVTARVEVDTAQWGWVMIDPNPAVREIPDEQQQTPQPVTRPETVVPPPPAEQQDQSQQAPPQSDRNTPPVQPLWLQILLAVLPWALGVLGLAALVLLPFGVIVLLKRIRRRRRRRAPTPRARIVGAWDEYRDALVDRGHEVARAATRREAVVGAPGEGGTGLAALADRSVFGPSEADGTAADRMWSATDDAITSLRAGRTRKERIRAAVSLRSLRVVDATRSARASVASAVTVRGRRSTGGEGAAGGRDYDGVQAGERRGRPSEDRRNT
>NZ_CP017580.1|WP_156794712.1|124825_126670_-|zinc-ribbon-domain-containing-protein
MIRCEHCGSTLPDGAIFCGECGRAVTAAASRRPVATPPVEQAPPPPLQQPDLHGRRQDPAAEAWLPESTLDPATRAWLTGADRGGEQQPAAVPVERPDDFTPRTAPSHVHGSGSGLTDWSGQQPGGVGPSEPARPAEPSEPSQPDEPIAPRAPEVPFTPQPPEPPLDPDAYPSDADAAESNAVSASASPEGEDPEVTRIAERPAAQRWAPPAEQAAAPAPSGPSWWVGRSTAANDSAADAADVTPDTAGAPDAVVSPPQPGDTAVVEPLVDRRPPRPAPLVTPGSQATTCHVCGHRLEPDDIFCAECGAVRPAVTAAFTGPIVPLPMDRPDWAADDAAETPDDAVDVPDDELTDDDVAEVSDDAAPDVVRDGDALPEPAVADDGDEGAEGSAGVLPSWVNGGGDGAPAGDTPPRPRGLHAAPEPESPAVDTPFVPPAPGSATVPSSAPSAQDSGAIGVPMAAPLPPLPGVAGAALPAPSTIDAPTSADGDLEDDVDETRIVSATPTHAPFVLHFSTGERFGVHGTGLVGRLPRPQPGERFDDLLTVHDPGKSVSKTHLELGRDGDDLWVSDRFSGNGTVVRHIDGSIRRCEPGRRYRVERGARVDIGEQFFLVQ
>NZ_CP017580.1|WP_070416278.1|123956_124727_-|hypothetical-protein
MTPFTARCTLVGAAVVLLVVGLVVPVEWPSRAVLLAAAGCCAVLDVLVVPATRVRPSRGAECGADVAVLFPTPFGQPGTVDGAVGTGTHRRPIVLGTASNGRELAVDDRSRPHIVVIGSGVLALAVFRAVVSQVRAAAGPDDEVRAACGAEARAVVAAGADHCPAMPSGTAAVVVDRPARTASPNGPAHAANGGHPDRACPPTRTTVVLVPGLSVLPRHWDVAVEVTRHGCTVRHPHERRGTPVAPALPQLQDEPG
>NZ_CP017580.1|WP_070416277.1|122931_123924_+|asparaginase
MTVLSDVHTDRHPLTAEGSVELAVLDRNGFDESRHVGAGVVVAADGTVIDAVGDVQASVYPRSTMKPFQALAVRRAGAVFSDEELVLTTASHAGTPAHQAIALHMLESYDHVESDLGCPPDMPFDRATARTMTEPRRLAMNCSGKHAGMLAACRVNGWDEETYLEMAHPLQQRVRETVEGFTHETVDVVGTDGCGAPVFPLTLAGLARGFAGVVARAESDTAALTDAVLDHPWAIDGIGRANTVTIERLRVLAKLGAEGVMVMGLPGGAAVAVKTLDGAQRSGTLAALTLLERNGIVDAAGVADVMAATGERVLGGGVPVGTLRAGSGLR
>NZ_CP017580.1|WP_083294950.1|122421_122967_-|OsmC-family-protein
MAVSVDVGEHRHAAIVLIFEEPTVSDHSYEVSVHWTGDRGTGTSGYRDYGRDHDVRAAGKHGIEGSADPTFRGDRDRWNPEELVVASLAQCHMLSYLHVAVTEGFTVVDYEDRATASLNLNRDGSGELTEATLHPVVTILEADRVADAEAAHATANSLCFIARSVAFPVHHVPHTKVRAAD
>NZ_CP017580.1|WP_139202004.1|140822_141380_-|hypothetical-protein
MIPVTTRSHPDAAVRYPREIAAAVTLPAACAALVAPGDAPSSRGASIAVVTACGALATRLAVIRFLAEPGPIEPRAVAAFDPFSDPTPPALCGFGPEPDRARLRTAGDRCADAWRHWRAEDPSADSAAGAAGALAVAAWCSWALGSAARAQTRAQHALDTRADDPLAGLVLRSVRAGSGPAWDRG
>NZ_CP017580.1|WP_156794714.1|141488_142262_-|peroxide-stress-protein-YaaA
MTGLTVLLPPSETKREGGDTDRTLDLRALSFPELAAERAAVITAARSVSSEESSARTALKLGPKSIGERFRNLELDTSGTMPAIDRYTGVLYDPLGSLDADAATRAWWFEHVVVQSAMFGPVRGGDLVPAYRLSHDSRLGPVRLASHWPEPSARVLAAHTADGLVLDLRSEGYRQLGPVAGAVVPRVVSIDGSGRRKALNHWNKTAKGRLVALLARTGAAVTTTAELVDWAGAHGVVLEEHDGSWDLVAESLEPATV
>NZ_CP017580.1|WP_022905458.1|142258_142522_-|F0F1-ATP-synthase-subunit-epsilon
MAALTVSVVSADREVWSGDATMVVARTTEGQIGILAGHEPLLATLAQGQVRITRADGSTVAADAEDGFLSVEHDTVTIVARQAALAS
>NZ_CP017580.1|WP_022905457.1|142523_143978_-|F0F1-ATP-synthase-subunit-beta
MTDTATTAVETSSAPGVGRIARVTGPVVDIEFPHDAIPEMYNLLFTTITIGDSSQEIGLEVAQHLGDDLVRAISLKPTDGLVRGQEVRDSGAPISVPVGDVTKGKVFDVLGNVLNTDEKLEITERWPIHRKAPAFDQLESKTSMFETGIKSIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIGEMEEAGVFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGVLQERITSTRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASQGLYPAIDPLTSTSRIMDPRYLGADHYETATRVKQILQKNKELQEIIAILGVDELSEEDKITVERARRIQQFLSQNTYMAKKFTGVEGSTVPLKDTIESFRAIADGEFDHVAVQAFFNVGGINDVEEKWAQIQKENR
>NZ_CP017580.1|WP_070416288.1|144025_144928_-|F0F1-ATP-synthase-subunit-gamma
MAAQVRVYRQRIKSAKTTKKVTRAMELISASRIQKAQARMAASGPYSRAVTRAVSAVATFSNVDHVLTTEPESSTRAAVVLFTSDRGLNGAFSTNVLKQGEELASLLRSEGKDVVFYLVGRKSVGYFAFRERESEQQWVGNTDQPEFSTAKSIGDAVVAKFLQDTAEGGVDEIHIVFNRFLSLATQEPQVVRLLPLEVVEGVEAPSNDEPLPLYEFEPDADAVLDALLPVYIESRIFNAMLQSAASEHAARQKAMKAASDNADSLIRDFTRLANNARQAEITQQISEIVGGADALSSKKK
>NZ_CP017580.1|WP_070416289.1|144928_146557_-|F0F1-ATP-synthase-subunit-alpha
MADITISPDEIRDALKDFVSNYEPTKASTAEVGHVIDAGDGIAHVEGLPGVMANELIRFEDGTLGLAQNLDEDEIGAIVLGEFAGVEEGQEVTRTGEVLSAPVGDGFLGRVVDPLGAPIDGLGEIPAEGRRALELQAPGVMSRKSVHEPLQTGIKAIDAMIPVGRGQRQLIIGDRQTGKTAIAIDTIINQKANWESGDEDKQVRCIYVAIGQKGSTIASVKGALEDAGAMEYTTIVAAPASDPAGFKYLAPYTGSAIGQHWMYQGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGDAQVKSIKKVSGTLKLELAQYRSLEAFAMFASDLDQASRRQLERGARLTELLKQPQYSPYPVEEQVVSIWAGTNGKLDEVPVADVLRFESELLDHLRRNSDVLTTLRETNQLSDDTVAEMTKQIDEFSKSFQTSDGKTLGSEQFEAASADDVDQEQIVKGRR
>NZ_CP017580.1|WP_070416290.1|146664_147459_-|F0F1-ATP-synthase-subunit-delta
MRSATREALASTRAVLADLGGAADLAAGAEILAAGRAIAGAPQLLGLLSDPTADPAGKKVVLDRVFAGQSAATRAVLTAVAGSRWSSHQDLLVGIEDAGIRAVAATAASGTPIEAELFSFETAVRSDADLELALGTKLGSPSEKSALVERLLGGKASEQTIVILSHLVQQPRGRRIGELVRDASRIVAEQAGKLVATVITATPLTDGQAARVARALAEQHGKGISINHVVDPSVVGGVRVQIGGDVIDGTVSTRLSELRLQLAG
>NZ_CP017580.1|WP_070416291.1|147461_148025_-|F0F1-ATP-synthase-subunit-B
MQNALIIAAEETHNPLVPPLYDIVWSAVAFVVILLVFWRVIIPRITKMLDERTEAIEGGIKKAEAAQEQAAAALDEYNKQLAEARAEASRIREQARSDANAIGNELREQAQADAARITANAQAQIEAERQSALQSLRTEVGTLALDLASGVIGESLKDDAKSTAVVDRFLADLEASQGSSASSAGER
>NZ_CP017580.1|WP_070416292.1|148034_148271_-|ATP-synthase-F0-subunit-C
MDATTVLAEISGNIATVGYGLAAIGPAIGVGIVVGKTIESVARQPELQGRLTTLMYIGIAFTEALAFIGIATYFIFTN
>NZ_CP017580.1|WP_070419070.1|148338_149151_-|F0F1-ATP-synthase-subunit-A
MSLTAAGNTVAAGSSKAAEFHGPSINEFFPDAIFFAGTPFEIDRLVIIRFIAVAVLLLIGIIGTRSLKLVPGRGQALIEYAFDVVRRNTFDNLGEKDGKRFLPLLATIFFSVLFLNLTGLIPGLNLQGTSRIAYPMILAIVAYVAFIYAGLRKHPGTFLRNSLFPPGVPWYLYIIVTPIELVSTFVLRPVTLTLRLLMNMVVGHLLLVLFFAATQFFFFDASLGFKAFGVGTLAFGIAFSFFEILVALLQAYVFMLLTAVYIQLALADEH

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Crispr_ID: NZ_CP017580_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017580_2

643638-643788

Orphan

Consensus_repeat	Method
CGCTGGGACCGGGGCCATTTCGCCCGCTCGCGCCGCGCCTCCCGAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017580_2

>merge|NZ_CP017580|2|643638-643788|CRISPRCasFinder
CGCTGGGACCGGGGCCATTTCGCCCGCTCGCGCCGCGCCTCCCGAGCCCTTCGGATGCGCCGGCGGCCGACCTGCGCGAGCGGGCGGTATACCCACGGGACCACGCTGGAACCGGGGCCATTTCGCCCGCTCGCGCCGCGCCTCCCGAGCC

>NZ_CP017580|2|2|643638-643788|CRISPRCasFinder
CGCTGGGACCGGGGCCATTTCGCCCGCTCGCGCCGCGCCTCCCGAGCC	CTTCGGATGCGCCGGCGGCCGACCTGCGCGAGCGGGCGGTATACCCACGGGACCA
CGCTGGAACCGGGGCCATTTCGCCCGCTCGCGCCGCGCCTCCCGAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017580.1\|WP_070416639.1\|648824_650510_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|235531
NZ_CP017580.1\|WP_070416633.1\|642476_643481_-\|aldo/keto-reductase-family-protein	unknown	unknown	gnl\|CDD\|381300
NZ_CP017580.1\|WP_070416640.1\|650574_651639_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_CP017580.1\|WP_156794742.1\|651635_653621_-\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|372624
NZ_CP017580.1\|WP_070416626.1\|629899_632362_+\|malto-oligosyltrehalose-synthase	unknown	unknown	gnl\|CDD\|237740
NZ_CP017580.1\|WP_070416635.1\|644966_645527_+\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP017580.1\|WP_070416634.1\|643892_644837_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070416631.1\|638283_640278_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP017580.1\|WP_181015135.1\|654000_655407_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_CP017580.1\|WP_070416637.1\|646847_647774_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381305
NZ_CP017580.1\|WP_083295009.1\|641773_642298_-\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP017580.1\|WP_070416636.1\|646080_646647_+\|TIGR03086-family-protein	unknown	unknown	gnl\|CDD\|274424
NZ_CP017580.1\|WP_070416627.1\|632358_634113_+\|malto-oligosyltrehalose-trehalohydrolase	unknown	unknown	gnl\|CDD\|274114
NZ_CP017580.1\|WP_070416629.1\|635324_636020_-\|class-F-sortase	unknown	unknown	gnl\|CDD\|320678
NZ_CP017580.1\|WP_070416638.1\|647831_648764_-\|DUF2236-domain-containing-protein	unknown	unknown	gnl\|CDD\|378343
NZ_CP017580.1\|WP_083295007.1\|634484_635300_-\|polyprenol-monophosphomannose-synthase	unknown	unknown	gnl\|CDD\|133062
NZ_CP017580.1\|WP_181015134.1\|653741_654050_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_083295008.1\|637408_638230_-\|DUF4397-domain-containing-protein	unknown	unknown	gnl\|CDD\|379570
NZ_CP017580.1\|WP_070416632.1\|640274_641777_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224136
NZ_CP017580.1\|WP_070416630.1\|636103_637255_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225940

Protein	Function_ID	Function_description	E-value
NZ_CP017580.1\|WP_070416639.1\|648824_650510_+\|AMP-binding-protein	gnl\|CDD\|235531	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP017580.1\|WP_070416633.1\|642476_643481_-\|aldo/keto-reductase-family-protein	gnl\|CDD\|381300	cd19074, Aldo_ket_red_shaker-like, Shaker potassium channel beta subunit family and similar proteins. This family includes voltage-gated potassium channel subunits, beta-1 (KCAB1B), beta-2 (KCAB2B) and beta-3 (KCAB3B). KCAB1B and KCAB2B are cytoplasmic potassium channel subunits that modulate the characteristics of the channel-forming alpha-subunits. KCAB3B is an accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit. The family also includes Drosophila melanogaster Hk protein, a founding member of aldo-keto reductase family 6 member B1 (AKR6B1), as well as voltage-gated potassium channel subunit beta (KCAB) from Arabidopsis thaliana and Egeria densa, founding members of AKR6C1and AKR6C2, respectively. Hk protein, also called hyperkinetic, is a beta subunit of Shaker (Sh) K+ channels and shows high sequence homology to aldoketoreductase. KCAB, also called Shaker channel b-subunit, or K(+) channel subunit beta, or potassium voltage beta 1, or KV-beta1, or KAB1, is a probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.	6.40029e-167
NZ_CP017580.1\|WP_070416640.1\|650574_651639_-\|EamA-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	2.90419e-10
NZ_CP017580.1\|WP_156794742.1\|651635_653621_-\|amino-acid-transporter	gnl\|CDD\|372624	pfam13520, AA_permease_2, Amino acid permease.	1.13733e-10
NZ_CP017580.1\|WP_070416626.1\|629899_632362_+\|malto-oligosyltrehalose-synthase	gnl\|CDD\|237740	PRK14511, PRK14511, malto-oligosyltrehalose synthase.	0
NZ_CP017580.1\|WP_070416635.1\|644966_645527_+\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	8.43105e-53
NZ_CP017580.1\|WP_070416631.1\|638283_640278_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	2.37636e-14
NZ_CP017580.1\|WP_181015135.1\|654000_655407_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	2.90149e-13
NZ_CP017580.1\|WP_070416637.1\|646847_647774_+\|aldo/keto-reductase	gnl\|CDD\|381305	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins. Escherichia coli YajO is the prototype of this family. It is an uncharacterized aldo/keto reductase family oxidoreductase.	0
NZ_CP017580.1\|WP_083295009.1\|641773_642298_-\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	2.88991e-16
NZ_CP017580.1\|WP_070416636.1\|646080_646647_+\|TIGR03086-family-protein	gnl\|CDD\|274424	TIGR03086, TIGR03086, TIGR03086 family protein. This family, like pfam07398 and TIGRFAMs family TIGR030834, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized.	5.65376e-23
NZ_CP017580.1\|WP_070416627.1\|632358_634113_+\|malto-oligosyltrehalose-trehalohydrolase	gnl\|CDD\|274114	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP017580.1\|WP_070416629.1\|635324_636020_-\|class-F-sortase	gnl\|CDD\|320678	cd05829, Sortase_F, Sortase domain found in the class F family of sortases. Class F sortases are mainly present in Actinobacteria, Chlorobacteria and Firmicutes. Their functions are largely unknown.	1.70266e-56
NZ_CP017580.1\|WP_070416638.1\|647831_648764_-\|DUF2236-domain-containing-protein	gnl\|CDD\|378343	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236). This domain, found in various hypothetical bacterial proteins, has no known function. This family contains a highly conserved arginine and histidine that may be active site residues for an as yet unknown catalytic activity.	4.2158e-42
NZ_CP017580.1\|WP_083295007.1\|634484_635300_-\|polyprenol-monophosphomannose-synthase	gnl\|CDD\|133062	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.	4.48351e-91
NZ_CP017580.1\|WP_083295008.1\|637408_638230_-\|DUF4397-domain-containing-protein	gnl\|CDD\|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	3.45487e-19
NZ_CP017580.1\|WP_070416632.1\|640274_641777_-\|glycosyltransferase	gnl\|CDD\|224136	COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane].	9.52502e-45
NZ_CP017580.1\|WP_070416630.1\|636103_637255_-\|hypothetical-protein	gnl\|CDD\|225940	COG3405, CelA, Endoglucanase Y [Carbohydrate transport and metabolism].	1.8979e-31

>NZ_CP017580.1|WP_070416633.1|642476_643481_-|aldo/keto-reductase-family-protein
MEFRYLGNSGLKISEITYGNWLTHGSQVENDVATQCVRAALDAGITTFDTADTYANTAAETVLGEALQAERRQSLEIFTKVYWPTGPKGHNDVGLSRKHIMESIDGSLERLQTDYVDLYQAHRYDHETPLEETMQAFADVVRQGKALYIGVSEWNAEQIRAGAALAKELGFQLISNQPQYSMLWRVIEGEVVPASKQLGLSQIVWSPIAQGVLTGKYKPGQPLPEGSRATDEKGGADMIKRFMRDEVLEAVQRLQPVADQAGLTLAQLAIAWTLQNENVASAIVGASRPEQVTDNVKAAGVRLDADALAAIDAALGDIPERDASKTVSPASRPA
>NZ_CP017580.1|WP_083295009.1|641773_642298_-|GtrA-family-protein
MTRTDTPVVVPSATGAVPVPPRAAVARLVVLARQLVSFGSIGAVCFVIDLGVYNLLRATVMPDGPIAAKIVSAVVSTALAWIGNRFITFRAERQTGRRETLREGLLFAVTNLIGLGIAAACLFVSHYVLGFTSTLADNVAGNGVGLVLGTAFRFAAYKALVFRSTDAHAKELAE
>NZ_CP017580.1|WP_070416632.1|640274_641777_-|glycosyltransferase
MIISATLWTAAGPLLQPNEGTAPSSVPNRGTTDVPTGGSGQLPQAAWSVGEWVGYSALIAISVLLTIIALTTLWWMLHAWRSRDALKSTSFSQTPRPAAHRFTLLVPGRHEQDVMGETLDMLAKQDHPDFEIIAIVGEDDPETDAVVRAAAARHPGLITVVVDDTAPKNKPKAMNLALQYATGDIVGVFDAEDEVYPRLLSLVDSRFQETDADVVQGGVQLMNFKSSWWSLRNVLEYYFWFRSRLHFHAGSKFIPLGGNTVFVTKERLDWSNGWDAHCLAEDCELGVRLSADGAKVVVAYSPEAVTREETPPTFASLLKQRTRWNQGFLQVLGKGEWKKLPSFRQRFFARYMLTMPFIQAATGLLIPLSVLMILFVKVPTAVALVSFVPVAPTLMLLAVEVVGLNEFGRLYKEKVRIRDYVKLVLGLVPYQIFLAAAAVRAVVRHAKGQNGWEKTEHTGQHRTAGQSAEVVGFANAVTTDRADDRSDDRELVASTTGGTR
>NZ_CP017580.1|WP_070416631.1|638283_640278_-|glycosyltransferase-family-39-protein
MTASITDTTGIPIRGAVARQRSGVGAWFRRHAASLGWLLPVLAMTVVVQSWNMSGTPQRIDDEGTYTAQAWAITHLGEITHYTYWYDHPPLGWIQIAGYTSLTGAFARYPFAVEAGREAMVFFAAVSSILLFVLGRRLGAGRATAAVAGLVFALSPLALQYHRTVYIDNVATPWLLAAFVLVLSRRQQLAGFAGAAACLGIAVLSKETYLLALPFLIWIAVRRADRSTRRYTLSVAGAVLAVIGGGYLLLAAVKGELLPGTGRVSLFEGITYQLGSRAASGSVFDAGSLANEAAAQWWALDPVFIVLGSAAAFVGLFLRRVRPIAAMLVFLLLMMFRPNGYLPVPYVIMLIPFAALLVAYTAERAVLTVLGRLRGTSGTDARAVVRRGLGTTWAVVTSAALLVALPLWGTQLRGFVLGNLDLPMQQAEQWVGDNVPKSSRLLVDDAMWVDLVQDGFARNNVIWYYKLDTDAAVERQSPNGWKDSDYVVTTDSMRTGGNSSSDIRQAIENSTTVAAFGTGNQRVDVRRIHAEGSTAAEAAITRATDLRKTMGTELASNPALFADEGTKSQFRAGQVDSRAMIALGQVLADGFVEVDRFTPVSGETGQPFRRVVLEAPGNAEASRVEATLDAMASGFRPDSVERDGSRLTVVYAPADPTTTATSAS
>NZ_CP017580.1|WP_083295008.1|637408_638230_-|DUF4397-domain-containing-protein
MPAPRRTLLVGALATSLVAAAVGLAPQAATAATPAATSSDQGWLRVGHLSPDTKGVDVELSSLAGGKTVFELDDVTYGQVSPYQELPVGTYVLSMRAADAPDSTPVISTDVTVDKGDASTVVAYGKNSGLKTTAFTDDLQQPGDGKAKLRLVQAATTAKSVDVSTSEGTAVAEDAAFGTATKYATVDAGKWTLDVSGSGQRGTAKVDLAGNTVSTLFVLDDSKGDLTVVPVTDAAATASTPSGGVQTGGGGAAADPVEQATHELIATLRSLFR
>NZ_CP017580.1|WP_070416630.1|636103_637255_-|hypothetical-protein
MTRRTWIPVTAAAAVLVALGIALVAVRPWGAPQSEAGGASTPTSSAAPDAARSPEQLRTDFLDRYVQDGRVVRTDQGGDTVSEGQAYGLLIAYANGDRDRFGEIWTWTKRHLLTDDHLLAWRWTPDDGIADGQSASDADLDAARALVLAGSSWDESRYTTAGKTMASAILEHETATTELGTILLPGPWADSEPYRYDASYASPAAYDVLAKATGDDRWEALGSGSRAVTRAVLAGSDLPSDWSQVHADGTVDPMPATGGDDRVLYGYDAMRLPLRYAEACAAQDRSLAGSIAPTLRRQTQLAAQLDLGGTAVTGDTNALAYVARAAAEQASGQSAAAATDLRRADRTAATTPTYYGDAWAALGATMLTSDVLGGCATRAGGAS
>NZ_CP017580.1|WP_070416629.1|635324_636020_-|class-F-sortase
MSGEPRLGARGPRRRGVLVGAVVAGVLVVGGVTGVAVAATNGTGGPTVAGSASPTAGSSGTASPAAGSATDGFQDPAAPAARSDATPVRVTIPAIGVSSSLEDLHRGAAGELDPPKDWDSAGWFSDGIVPGEVGPAVIAGHVDSPTAAAVFFRLDELVPGDEVHVAMSDGSTRTFTVDRSERAAKSAFPTSDVYGTAPTPQLRLITCDGTFDTATGHYTDNLIVFADLSSD
>NZ_CP017580.1|WP_083295007.1|634484_635300_-|polyprenol-monophosphomannose-synthase
MSSARSTMSTTLVIIPTYDEAENVRPIVERTLAATDADVHVLVVDDNSPDGTGNIADQIARETDRVHVMHRTVKDGLGGAYLAGFAWGLEHGYDKLVEMDADGSHHPEYLAWMIELADTNDLVLGSRWIKGGAVENWPWYRELLSRGGNLYTRLALGIAVRDATGGFRVFTSRAFERIDLAGVASKGYCFQVDLCWRALEAGLRVVETPITFTEREFGVSKMSGNIVRESLTLVTKWGIDRRIREARSLVKDHRRLPSVRANAHAVADHAA
>NZ_CP017580.1|WP_070416627.1|632358_634113_+|malto-oligosyltrehalose-trehalohydrolase
MTAPDRYAVWAPTPERVRLVVDGTEYPLTRGTDDWWTTDAIVPVVGARYGFRVGDDDAVRPDPRSRFQPEGVHGPSEVVDPARFSWTDDAWTGRPARGGVIYEMHVGTFTPEGTLDAAAAKLDHLVELGVEFVELLPVNAVNGEWNWGYDGVGWFAVHAPYGGPDAYDRFVDRAHALGLGVIQDVVYNHLGPSGNYLPLYGPYLLQGLGNTWGDSVNVEHPEVRRYVLDNVRMWFRDHHVDGLRLDAVHALRDTTRPHVLQAMASETDAYSAFVGRPLSLIAESDLNDPIMFRPQEASGYGLAGQWSDDFHHAVHVALTGETNGYYADFAPLSALAKVLEHGFFHDGTWSSFRGKRHGRPIDRGTSPTMALVVANQNHDQIGNRAAGDRLAATVSDEGLVIAAALTLLGPFTPMLFMGEEFAASTPWQFFTSHPEPELGKATAEGRIKEFAEHGWDESAVPDPQDPTTFTNSKLDWSDVDSERGAAILRAYRVLVALRRTDQAFVDQRYEANAVRCSEDRRWLVLTRGLLGPDARPVHVVVNFLDDAAEVPVPGATGEELYRFGEADVATDCVRFTGRGVVVLR
>NZ_CP017580.1|WP_070416626.1|629899_632362_+|malto-oligosyltrehalose-synthase
MTARRVPTSTYRLQVTPDFDLSAARDVVDYVRDLGADWLYLSPVLQAEPGSQHGYDVVDHGHVDTERGGDEALQALADAAHAVGLGVLVDVVPNHVGVATPEVNPWWWSLLEHGQGSPVAWAFDVDWDAGDGKLRVPVLDDRLLDAVELRDGRLYLGDTAYPTAPGTVHDGDSVADVHARQHYEFVHWKRADHELNYRRFFAVNTLAAIRVEEPEVFAASHGTIGAWFRDGLVDGLRIDHPDGLYDPAGYLQDLAALTDGAYTLVEKILEPGEELPASWPVDGTTGYDALGVLDRVFVDPAGEDSLTAASGAEPTDWQQLTHDTRRGIADGILGSEVERLARLLGPGTGSAASAPLPHDRIVDAVAEIVASFDVYRTYLPEGAHHLIDALEGAASARPDLDDVIDRIAPALVDPANAAAIRLQQTSGMVMAKGVEDTAFYRTSRLTSLSEVGGDPSVFSVSVRAFHQAQRDRLGSWPHTMTTLTTHDTKRSEDTRARIAVLAELGHEWASTLERLQSLAPLEDAVLADLLWQAIVGARPASRERLHAYAEKASREAGDSTTWTAPDEDFERRMHALVDAAFDDPAVVAVLDALDERIDAAGWSNGLGQKLVQLTAPGVPDVYQGTEFWDRSLVDPDNRRPVDYTERRHVLAELDGPDDDGPERLPDVGLDGAAKLLVTSRALRVRRDHPELFTRYLALEATGSAADHVIAFDRGGAVTIATRLPIGLERVGGWGDTLVHAVPQDRVDLLTGRSMPAGRGIALAELLTDYPVALLVPAHVAEATDHGTETHADSGATADSGSGSADESDAQAEIDILEGHA
>NZ_CP017580.1|WP_070416634.1|643892_644837_+|hypothetical-protein
MHVDATFPMALRGRPFRVREALHRGVSVGRLRSRAFLRPFHGIRAWTRPQTHDERARAVQPRLRPDQAFSHTTAAAILGFPLPRRLERDPRVHVTTIGTDQALRVRGTIGHRARRGRLQVVHSGTAALTHPADTFVALATLLSRDELIVVGDAIIGWLGWCDHAELVAAARRYRGARGIRRVRAALAEMRPGSRSPGETRLRLALTRRGLPQPALNHDVVVDGRWIACVDLAYPDARVAIEYESDLHRTDDRTFRKDITRGEHLKDAGWWLLRATADDVGPAIEALVARVRRLLDGVSTGRHDPRPTRRPASLR
>NZ_CP017580.1|WP_070416635.1|644966_645527_+|YceI-family-protein
MTLTASTIPGYQTGTWKIDPTHSEVTFSVRHLAISKVKGKFETFDATVVTAENPLESTVEANIDVASINTGQEQRDQHLKTSDFFLTEEHPQLTFRSTSIEAKGDDLHIAGDLTLRGVTKPVVLKAELGGFTTDGYGQVKFGAEATTKIDRTEFGVNWNAALEAGGFTLGNDVTINLDVQFVLQAA
>NZ_CP017580.1|WP_070416636.1|646080_646647_+|TIGR03086-family-protein
MATDWIALQALAAAEFGRRVAAVTDWDASTPDSEWTTRDLVRHVVEEQRWIPKLLTGCDYAQAEADLEAVGSDLAAEWAKFAAEAIEAWQRTPADTPVHLATDVVPAGQYLTEQTSDITIHTWDLARATGSDETLPDELVQAVWEHFEPQIEDLAATGLYAAPVDVDEDAPLQVRLLAVTGRDARVAA
>NZ_CP017580.1|WP_070416637.1|646847_647774_+|aldo/keto-reductase
MMSYGDPDKGAHEWSVGIDEARPFVRRAYDQGITTFDTANVYSAGSSEEITGTLLKELAPREEVQVFTKVFNRMRPGPNGAGLSRAAIMHEIDASLTRLGTDYVDLYQIHRFDPHTPVEETMEALHDVVKSGKARYIGASSMWAWQFAEMQHVADLNGWTRFVSMQNQHNLLEREEEREMHPFCAHTGVGVIPWSPLARGKLTRPWDAQGSGNRADTDEFGKTLYKQDEDANRAIVDAVQQVAEAHDVSMAQIALAWVMRQPAVSAPIVGATKEHHIDDAVAATTIDLTDDEVTRLESAYTPRVPSGF
>NZ_CP017580.1|WP_070416638.1|647831_648764_-|DUF2236-domain-containing-protein
MPSVADAFRSRLNDTFTGGATERPAWIDELEQGTDAGFFGPGSATWSVHGGKQTILAGVRALLVQALHPGALAGVADHSRYREDPFGRLAGTIRWIYTVSHGDTTAARSASAWVRKLHERVRGEYVDGHGVTKPYAANDPDLARWVHLAFTDAFLRSAQLWGEPIPGGADAYVREWAIAGRLMGVEDAPESDAELRAQMNGYLDRGELVANARTLDVVRFIKDPPLARLLRPGYRALFDGAVVSLDPRHRSMLGLRTPAVGPVEFPVRRTAGVVLDGIGAVLGHQPGTERAALVRIARLGGERRIPDATV
>NZ_CP017580.1|WP_070416639.1|648824_650510_+|AMP-binding-protein
MSIDTPRPWLASYAPGVPHDIDEPTGSLYDIVEGSARRFPKKVALEFFKRTTTYAELEEQILRAANGLRKLGVTAGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTPRELRHQFEDHGAKVAIAWDKSVATLQDFPSDVKLDAIVSVDLTRAMPRGTRIALSLPVAKARESRAKLTTKVRGTTPWDDLVSNRKLSKRHPRPATDDVALIQYTSGTTGVPKGAVLSHGNLIANAAQARAWVPQIQPGDGSVVYAVLPMFHAYGLTLCLTFAMSMASRLVLFPTFDPALVLAAMKKHPPTFLPAVPPIYARLQHAADSAKVSLEGIEIGISGAMALSKEVVEPWEARTGGYLVEGYGLSECSPVLLANPVSPARRLGSIGLPLSSTEARVADPDDPTKVLGTDEPGELQVRGPQVFRGYWGKAEATDEVFTPDGWFRTGDIVAIDADGYVRIVDRLKELIITGGFNVSPTEVEDALLKHPSVREVAVVGITQGGNEQVVAAVVPKDPATFDADALRAWSREHLAAYKVPRRVVVVEDLPRSMIGKVLRRKVRDQILGE
>NZ_CP017580.1|WP_070416640.1|650574_651639_-|EamA-family-transporter
MTGGADASRASRPVGGLAAVLVAAAVWGTTGTATHFAPGVPAFVFGAVTFGLGGIVLALGAGRGTLRAVADPASRRWALLGAASLVVYAVAFYAALADAGVALGTTVAIGSSPVFAGLVEWVADGRRVTRRWVVATLVSVVGMVVVTLARSSEHAGASGGSDRGGSLVLGLGLGSALLAGLTYALYSWAVARGMRAVSVPVALPGGVSVADRAALLARASLPGRASLPGRASPLARASLPGERGLVGAVFGLAAVPLVVLAVVGGQASLGVAANWPVFLYLALVPTVLGHSLYAVGLRSVSASVATLLSLFEPVVAAVLAVLVVGEHLGAGGWVGIGLVVVGLAVLAVPERARA
>NZ_CP017580.1|WP_156794742.1|651635_653621_-|amino-acid-transporter
MTATDAERAAERDATEPPLDRSTRVRRWMLHGADQGASHQGPHQVEVEKTHSWWRVMCLTGVDYFSTLGYQPAIAALAAGLLSPIATIVLVLVTLFGALPVYRRVAQDSFRGAGSIMMLEKLLPWWAGKLFVLVLLGFAVTDFMITMTLSAADATAHIAENPFTPHWFTEIPVPLTLALLLLLGVVFLRGFKEAIGIAVALVAVYLLLNAVVVGVSLWHVFENPMVASDWWSGLTAQHSNPLVMIGIALIVFPKLALGLSGFETGVAVMPQVRGDASDDTSARPEGRIRGTKRLLTVAAVIMSSFLITSSIVTTFLIPQHEFQPGGGANGRALAYLAHEYLGGVFGSVYDFSTVAILWFAGASAMAGLLNLVPRFLPRYGMAPQWARATRPLVIIFTLIAFVITIIFQANVDAQGGAYATGVLVLITSAAVAVTLSARRKQQKKRTIGFGIIAVVFVYTTVANVIERPDGVRIAAIFIIAIVVVSLVSRVRRSFELRASSIELDATARQFIEADTDQFSSVCIIANEPGAGTAEAYRSKGREERRDSGIPARVPTMFLEVLPADSSDFEEDLVVEGHVIHGHRVLKVRSGNVPNTIASTLLAIRDIAGVVPSIYFEWNEGSPIRNAIRFVFTGVGDVAPVTREVLREAEPDVNRRPSVHVS
>NZ_CP017580.1|WP_181015134.1|653741_654050_+|hypothetical-protein
MNHGRALTAIAAANTRRTTPQKTVPKRGARRGRRAGAGAPSNGVLEVVGSTGVVRSSGVVRSSGVVRSSGVVRSSGVVSSFVIVSFLTGRRSRRAARRRHRR
>NZ_CP017580.1|WP_181015135.1|654000_655407_-|PspC-domain-containing-protein
MTQQDTGGPASATRFFDWIRGIHVTRSDDRWLAGVCGAVAERTGLDPLVVRGVAIVVALLGGPVFLAYAAGWALLPDSSGRIHVERMVRGVLDPALIAIGVLVVLTFVPAVQGIWWQGVPVAWGMPGWLSATLGTAWTIALVGCAVWLVVVLARRGSQPAAGEPAAAGEPAEPGMRRDFWTSADDPAPTPWAATGETTAGGPDHVAPGGSAAGASSASWQWDTTSAADRHRQHTERMRAERQRQAERRAERAERLPGAGYVAVSLGLALVVGAGVAVWAQQTDLPVPVLGIAAAVAVLAVATVVAGVRGRESGGLGLFSTIGVVALVVTGVLPTGTQVTVVGGTTWRVDDVRPGTERNYAMVVGGPTLDLRGLDEADGGGTVNLWLGAGGAEVQLPTDAPVRVRVSGIGYGVELRPDDDADDSLGGALGTTTVENRAARSADAAETTTVHVWLIGGGVDVPRAVTVDQ

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Crispr_ID: NZ_CP017580_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017580_3

946586-946676

Orphan

Consensus_repeat	Method
CCGCACGGTCGTCGCGGTCGTACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017580_3

>merge|NZ_CP017580|3|946586-946676|CRISPRCasFinder
CCGCACGGTCGTCGCGGTCGTACCGACGAGGCCCGCGGTCGTCACGGTCCCGACCACCGGCACGCGGCCCACGGTCGTCGCGGTCGTACCG

>NZ_CP017580|3|3|946586-946676|CRISPRCasFinder
CCGCACGGTCGTCGCGGTCGTACCG	ACGAGGCCCGCGGTCGTCACGGTCCCGACCACCGGCACGCG
GCCCACGGTCGTCGCGGTCGTACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017580.1\|WP_070416847.1\|942999_943719_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379115
NZ_CP017580.1\|WP_181015144.1\|944851_946168_-\|fibronectin-type-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|238020
NZ_CP017580.1\|WP_070419213.1\|955278_956946_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP017580.1\|WP_156794756.1\|953989_954160_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070419209.1\|935611_936556_+\|urate-oxidase	unknown	unknown	gnl\|CDD\|274554
NZ_CP017580.1\|WP_156794755.1\|948524_949001_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP017580.1\|WP_156794919.1\|936570_937122_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133025
NZ_CP017580.1\|WP_070416842.1\|934508_935327_-\|FAD-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224238
NZ_CP017580.1\|WP_070416854.1\|953746_953983_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070419211.1\|953163_953730_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380057
NZ_CP017580.1\|WP_070416852.1\|951282_951873_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP017580.1\|WP_181015143.1\|937148_937661_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_181015145.1\|949111_951211_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP017580.1\|WP_070416856.1\|954718_955225_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|214900
NZ_CP017580.1\|WP_156794920.1\|940684_942616_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133043
NZ_CP017580.1\|WP_070416845.1\|940274_940688_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379279
NZ_CP017580.1\|WP_070416848.1\|943844_944771_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187540
NZ_CP017580.1\|WP_070416855.1\|954191_954374_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070416853.1\|952217_953069_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181334
NZ_CP017580.1\|WP_083295399.1\|937767_940278_-\|OpgC-domain-containing-protein	unknown	unknown	gnl\|CDD\|378405

Protein	Function_ID	Function_description	E-value
NZ_CP017580.1\|WP_070416847.1\|942999_943719_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379115	pfam13305, WHG, WHG domain. This presumed domain is around 80 amino acids in length. It is found to the C-terminus of a DNA-binding helix-turn-helix domain. This domain may be involved in binding to an as yet unknown ligand that allows a transcriptional regulation response to that molecule. The domain is named WHG after three conserved residues near the C-terminus of the domain.	7.83781e-09
NZ_CP017580.1\|WP_181015144.1\|944851_946168_-\|fibronectin-type-III-domain-containing-protein	gnl\|CDD\|238020	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.	6.213e-09
NZ_CP017580.1\|WP_070419213.1\|955278_956946_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	6.70841e-54
NZ_CP017580.1\|WP_070419209.1\|935611_936556_+\|urate-oxidase	gnl\|CDD\|274554	TIGR03383, Structure_Of_Uricase, urate oxidase. Members of this protein family are urate oxidase, also called uricase. This protein contains two copies of the domain described by the uricase model pfam01014. In animals, this enzyme has been lost from primates and birds. [Central intermediary metabolism, Other].	2.77741e-150
NZ_CP017580.1\|WP_070416852.1\|951282_951873_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	6.72083e-07
NZ_CP017580.1\|WP_156794919.1\|936570_937122_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.55847e-29
NZ_CP017580.1\|WP_070416842.1\|934508_935327_-\|FAD-binding-domain-containing-protein	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	4.577e-23
NZ_CP017580.1\|WP_070419211.1\|953163_953730_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|380057	pfam17926, TetR_C_21, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present the TetR Transcriptional Repressor found in Streptomyces coelicolor A3. Family members include HTH-type transcriptional repressor sco4008, which is suggested to be a transcriptional repressor of sco4007 responsible for the multidrug resistance system in S. coelicolor A3.	1.31755e-19
NZ_CP017580.1\|WP_156794755.1\|948524_949001_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	1.10852e-07
NZ_CP017580.1\|WP_181015145.1\|949111_951211_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.1428e-60
NZ_CP017580.1\|WP_070416856.1\|954718_955225_-\|flavin-reductase-family-protein	gnl\|CDD\|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	7.84755e-26
NZ_CP017580.1\|WP_156794920.1\|940684_942616_-\|glycosyltransferase	gnl\|CDD\|133043	cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.	2.6524e-74
NZ_CP017580.1\|WP_070416845.1\|940274_940688_-\|ATP-binding-protein	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	9.07697e-13
NZ_CP017580.1\|WP_070416848.1\|943844_944771_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187540	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3. These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.51412e-78
NZ_CP017580.1\|WP_070416853.1\|952217_953069_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|181334	PRK08263, PRK08263, short chain dehydrogenase; Provisional.	1.57463e-89
NZ_CP017580.1\|WP_083295399.1\|937767_940278_-\|OpgC-domain-containing-protein	gnl\|CDD\|378405	pfam10129, OpgC_C, OpgC protein. This domain, found in various hypothetical and OpgC prokaryotic proteins. It is likely to act as an acyltransferase enzyme.	1.44377e-68

>NZ_CP017580.1|WP_181015144.1|944851_946168_-|fibronectin-type-III-domain-containing-protein
MFRAVLTAAAAVALVIGGAAPATAAPSSVPGAPTSVRVTGAADSATVTWGLPKSGAKVTSWRVTVSPAQQQPDAGVDRLPASARSDRFGNLTASTAYTFSVRAVGTRGTGKAVSVRYTAPGSVQTVQSLFALDGAGSVVRFPTSGTSAPTTIAPNAAGFTADDVGDVFVPSADRTSIVMYPAGGAAARTVATGLHLTADLRSDVAGNLYWVDSVSGAITKLPVSGAAPTAIIPSAGSGWAVGRDGTVSAVTFGTQGAATKVVSVSPTGVRTTRSIPETGYRIFAAVIADGGGNLYVNYLSTGASGASGWVLLAKGSSELVSAESRIGFTYAATNGRALVSAKSAGWCAAPSEGSPGGCTADKTITSLSSRTADGTTTEQTTSGVTAEGRGVWIGAADEAGDLFFDVSAGLTTGLWRLDAAGGVAQRLSAGQFSRLLVI
>NZ_CP017580.1|WP_070416848.1|943844_944771_+|NAD-dependent-epimerase/dehydratase-family-protein
MSQHHVVIGAGPVGRHVAALLAERGERVTVATRSGRDTGVSGVEHLALDASDSDALTRTTEGAVALYNCANPGNYTQWEQTWPPLATALLTAAERTGAVYAITGNLYPYGPVDGPMRESLPDAATDHKGILRARLWADARTAHEAGRLRAVEVRASDYVGAGIGENGHITRVLPAALQGKAVSMIGRTDLPHTFTDVLDVARMLVAAAADESAHGRTWMVPSNAPRSQVQALTEVLAAAGKPPVTVRRLPAGMLRAMGLVSPMMREIAEMSYQWTAPYVVDDSAARAHFGIEPTPWNEVCRRTVEGVA
>NZ_CP017580.1|WP_070416847.1|942999_943719_-|TetR/AcrR-family-transcriptional-regulator
MTDKAPTARALARETVRAGILAAARVRLTEEGPSQLSLRAVARDVGMVSSAVYRYFPSRDDLLTALLIADYDELGAAVEAAEAAAGPAPGARWVAVCRAIRTWSIAHPGDFALLFGSPVPGYVAPRSTVDPASRTTLRIVRVVADAVADPGYRAPLPAGSGPGLVAAAVADGVASLRAFGTELPEEVLVRTLMAWTTVFGTVSFELFGHFVGSVSDGAAYFDEVVARLAEGLGFVAEFD
>NZ_CP017580.1|WP_156794920.1|940684_942616_-|glycosyltransferase
MLASIAGVNYIVWRWAASVNWHSWWIAVPLILAETYSVIDSLLFAFGAWRLRERGEPPTPPQDPVTVDVFITTYNEPVDLVVRTATAAKAITHPHTTWILDDGNRPEMRAAAESLGIGVITRGADWIDRPRHAKAGNLNNALLATQGEFLLILDADQVPEPSILDRTLGYFKDSRMALVQTPQWFENVPEADLLGSQAPLFYGPIQQSKDGWNAAFFCGSNAILRREALMQLGVTRYVREVEASVARTIKTSRKLLARARETETDPRVLGALDEAEAVVDRARDQVQRGEPLGDVTYDFQRGIDTISYRFAASDLESVRNDLQELAAMSTDANTFAGLDDAALDVLGRRDASPVAAIESIAVLTRALDVNRDDEAQPIMPLATISVTEDMATAMRLHGLGWKSAYHDEILAKGLAPEDLPTMLVQRLRWAQGTMQVFFRENPLVQKGLSWGQRLMYFSTMWSYLSGFAAIVYIAAPVLCLSFGVVPVQAYSVDFFVRLTPFLVLNQLLFWVVAAGRPTWRGQQYSLALFPVWIESVTSAFENVFRGKPLGFRVTPKVRDESEQKPRWDLVKPQLIAMGALVAALILIGIRYLTGQASGIAPLVNTAWVVFDLFIFSIVIRAVLYRGPGTAQSEHESSTAGGPL
>NZ_CP017580.1|WP_070416845.1|940274_940688_-|ATP-binding-protein
MSPARVEFDVPAVPASLDEVQDRFGAWWDTLGIDDVRLRFGLETALAEIAANIVEHTRRADQEAGRRYTVELDATDHELVAVLTDNGLPVDIDLAAVTMADADEESGRGLALAIAALDRLEHRHEGGHNVWTLVCAR
>NZ_CP017580.1|WP_083295399.1|937767_940278_-|OpgC-domain-containing-protein
MSRTAARLVAFLVVLATFALGGALPASAVQAAATSGASIAPSDGKTWFGPDIDWGDDAPAGYAGRLGATPSMYGVEIQYPLDRSARKEFLRATRAAATQGAVLVVSLEPDRSLRSLTAADARAANALLEEVHRQYDTQVLVRFAPQMNGTWVRWGQQPTQFVSAFRTLATAVHGGSSDALMVWSPSYGAGYPFGESAGRLQDLSATDVSKLDTNGDGQLTAADDPYEPYWPGDSSVDWVGLSMLYFGKGKATEAAGRDVPLTRNDVPEAGEVSARFDETWGYEQRQQGSFYDRFAVADDRPMLLDTGALYDHSLRGADELPVKQGWWRQVIAAVQDRPLIRGVTFLETNRREPEAGNRVADWRDTAVPGIAGSFRTDLERAGDFVFGPVTDEVTPRDGAAATDQQYDTGGDQMAWIVWCAVGLAVVFLLSGLFGRLLPSWRYPDDGKPGRDLRLDLFRGFIILAVVITHIEIGGPYSYITLHAVGAITGAEMFVFLSGMVLGMTYPFAIKKFGEWAAAIGAWKRARKQYLVTLGVILVVFALSFVPFLNTDAITTFTDRGTGTGGVGAEGRVYDLYPNAMQLLAYPPPWYAIRQFLLLEMGPWPFNIMGLFVVLSLFIPAFMWVIRRGFWWALLIVSWALYVYQALNPDFRPLNSQFEAVFPLLTWQVVFTHGLVLGYYRRQIIGALTGRLGKVLVGVGIGGYALFLVYVWAGDHFGFTPVPFPATMYDQLYNTAYQRVDLQWGRLVDIAFFAIVSYAILTVFWKPIAKAIGWLWIPIGQASLYVFVWQVFFALAIASIPGVDWGNGWIGFATHTLLILLAWYMVRKRFLFSVIPR
>NZ_CP017580.1|WP_181015143.1|937148_937661_-|hypothetical-protein
MRRWPWWLAALALAVAFGGLWFLVTIVVMPELNAVERAVISAITGAAYGIVMAIFLIRLRRGYGTVLQDAGFRRAVRRGVVPPDVDVDGWRRAVQQHRNQYHPLRWAAPLVYVPMTGLSVWVAASGQPLYWIFVGLFLVMLVASLIVAPRAVRRTDAMLTELDRRERSVQ
>NZ_CP017580.1|WP_156794919.1|936570_937122_+|NTP-transferase-domain-containing-protein
MLLAAGAGTRMGRPKALVAEPDGTPWLHLGVDALLVGGCDRVVVVLGAAAARAGALVPAVDEVTVVVADDWAAGPGASLAVGLAAVTGPATACVSLVDLPGLPASAVRRVIGDGDHPTALRRAVHHGVPGHPVVVGSEHRAALVAALSRDPAHGAGPWLASSGAEPVECGDLWDGHDQDHPRC
>NZ_CP017580.1|WP_070419209.1|935611_936556_+|urate-oxidase
MEITDVQPVPTTTTVHLGANQYGKAEVRLVRVTRDTDRHEIEDLTVTTQLRGAALADSYTEGDNAKVVATDTQKNTIYAFAREHGVGTPEEFLLRLGRHFSTAFDWYDGSTLSAEQHTWERIVVDGREHDHSFVRAGRGTRTAVVQVDGDEVHVLAGVTDLTVLKSTGSEFHGFPRDGYTTLAETDDRILATSVTARWRYTPEAVAAGIDYDAVYAGVLDRMLATFAELHSLALQQTLFAMGRSAIETFPEIAEVRFSMPNKHHFLVDLAPFGLDNPGEVFFAADRPYGLISGTVVRDGVAEAPAAWTSVPAFV
>NZ_CP017580.1|WP_070416842.1|934508_935327_-|FAD-binding-domain-containing-protein
MDLVSVRTVRTPSHRDDLSFGPGEHPLAGGTWLYSEEQSGLTGLVDLTALGWRDTERSAGGLRIAATCTIASLLRVAPEDDWRAWPLVDRCANALLASFKVWNQATVGGNVAVALPAGAITALLVTLDAVAEVWTPDGGERRVPVADLVTGPRTTDLAPGEVIRAFDVPRSALVARTGFRRVSLSPHGRTGALVTARWSASGFVLVVTGATPRPLVLRHPGVPTAAEVDARLEAHDAWYDDPHGSPDWRRAVSRRFAAELVAEALGTTGGAA
>NZ_CP017580.1|WP_156794755.1|948524_949001_-|MarR-family-transcriptional-regulator
MTEDRDDAERLLRAQLDRLWVRQTLRSSLIESRGGLDPTGRVILRAVDHFGAVRSMAIADATGLSRPVISRRVASLVESGYLGTAPDPADGRASLVSIAPAGRTLLDTLDVAGAEVFDDLTGAFATGELHTLAGLLARLNDRADTVLGIGATDRRDAS
>NZ_CP017580.1|WP_181015145.1|949111_951211_+|MFS-transporter
MTATAPVPVQHGRRAAGVPTDSAAPGQQPLMTHRQILLVIYGLMAGMFLSSLGQTVFGTAIRTIGDDLHGLDQQAWVTTAYLITSTIATPIYGKLSDIFGRRPLYIFGIVVFILGAVLSSMSTSMLMLAGFRAVQGIGAGALMSLPLAIMGDILAPRERAKYQGYFLAVFGISSVIGPLIGGLLAGSSEILWITGWRWVLLINVPIGIAALVMVLVFLHLPKVHGGDTAKPKVDWWGATAVIVTLVPLLLVAEQGRTWGWGSAAAIACYVIGVVGLVALLLIESKMGDAAIIPLKLFRSGTFSMATVIGFLVGFAMFGAMLTIPLYLQIVVGLTPTESGFATLPLVGGLMIASITSGQIVARVGRYRIFPVIGTALVSSGYVVLTFMSIDKPLWFLMIGMFLIGLGLGSVMQSLTLASQGSVEARDMGVATSSATFFRQIGGTLGTAVLLSILFSVMPSNILHATANQKDLGAALDAATNPTVATAPANRGVMDEIWTPIVTPLEQNVQASLDDVTAQVQQSTASAPAAVQAQALAAAADQAHASVQDGKLVVDWSDAAQRSYWVGELTPAVAKQVSDGSGSGSSTMSTNDTSFLTGADSRLTRPFMAGFNASSVTIYWVGLGVILLAFVLTWFFRVPPLRQRSALQERADAAGAQRADDDRLSAEDELETAAGLAAAEAGSFTGPMTGSTPTQPAQRR
>NZ_CP017580.1|WP_070416852.1|951282_951873_+|TetR/AcrR-family-transcriptional-regulator
MTTTPATTTATEPCSLRERKKQQTRSALHDAALTLVSAHGLDGVTVEQICADADVSPRTFFNYFSSKAHAALGLDTVEVPPAAATWFATAEGRFIDDLCGLVAATVPLSQDRRRMKELLVLRPEMAPMVMQWMAESRQSLLATVGTRTDEQTARTAVALVMSALSEVAHRETVGGPDELAVRLRAVVGEMGALASA
>NZ_CP017580.1|WP_070416853.1|952217_953069_-|SDR-family-NAD(P)-dependent-oxidoreductase
MSVFLVTGASRGLGRSIVTAALAAGHQVVAGVRDLHALDDLTSAELVPVALDVTDPDAARAAVRTAVERFGRLDVLVNNAGYANLASIEDVDPADFRAQVETNLFGVVTLSQEAVHVMRELGSGHIVQVSSVGGRMSTPGLGAYQTAKWAVGGFSSVLAKEVGPLGIRVTVLEPGGMRTDWAGSSMTVAPVRPEYEATVGASARMHGGTSIGASDPDLVAELVLQVVAMDEPPLRLLVGPDAFEHGTAAGRALLAEDERHEALSRSTQAADATPEQLDPLARA
>NZ_CP017580.1|WP_070419211.1|953163_953730_+|TetR-family-transcriptional-regulator
MPRNADATRARLLVAARDEFAAVGIAGARVDRIAAAAASNKAQIYHYFGSKDGLFDAVFDAMVAETLDEVTIDADDLPEYAGRLHDSYAHRPWVQRLATWYRLERGDTSHPIDAVVRSNAAKLRAIEDAQRDGRLPTTFSAAELLGIVIHTAALWSGATPEYARLTDEVGAARRREVVVATVAAVVRG
>NZ_CP017580.1|WP_070416854.1|953746_953983_-|hypothetical-protein
MTDSLALWVLGGAFVLLGCATAVSPEAMHDFLQRQMRIVQGKKAADRHAQLPTALFRALGIAMLCVGIVLGVFAATGG
>NZ_CP017580.1|WP_156794756.1|953989_954160_-|hypothetical-protein
MNALPLVLGLVLVVGGLACIPWVVQRNRNHSPSDRGRLIAVVIALVMLVAGALLLR
>NZ_CP017580.1|WP_070416855.1|954191_954374_-|hypothetical-protein
MKGNLLLPTIIALVAIALGVVTLLSPGRAEAGVAIWGALAGLFGVYVLCGVVVSWRARNK
>NZ_CP017580.1|WP_070416856.1|954718_955225_-|flavin-reductase-family-protein
MHDHFIEDPLDIREAIAEVPSVVAAIAACVDGSPVVMVATSFTVGVSYDPPLATIAVQHSSTTWPDLAAAPTLGISVLGDGHGPHTAQLASRDRARRLHGIEYATAGSGAVFLDGAHSWFECSVEGVHRAGDHDIVVLRVLRVARDAARSALVWHRPARSRVAVDAQP
>NZ_CP017580.1|WP_070419213.1|955278_956946_-|MFS-transporter
MLLLDSTIVSVALPDLGRDLGADASTSVWVNSAYLFAFAVPLLVAGRLGDRFGHRRVYLVGLAVFTIASVGCAAAPGIGALVAWRAVQGLGAALLTPQCLTVIRSLFEPPRLAVALAVWSAGGGAATVAGPIVGGLLVEAWGWPSVFLVNVPVGIVTAIAVLRFVPVSRRIAVPLPLFAVVGVTVGVFGVVVGVQGTDTGLLADPVARGGAVLLGAAVVAAVLVRQRRAGDRALVPLALFRDRGFVTGSWGATAASFCVGSAPIPLMLDLQQTRGLSAGSAALVLVPMGVACLASAPFVGRMTNTAGPRATATVGAVLLVVSVALTAVLVGAAAPLWTIAAAFTGFGIANAFVWSPFSLAAVLGAGPATVGAASSVFNTVKQLGAVLGSTATAVLLATAGDAVALGALALVACGAVVAARALSGRPGAPVVLTGVIVHGAGVGHDLGFPTANLRPEDESAAPVPVDGVYVGWLAAPVGAPPRQALVSIGSNSTFPDRPRTVEIHVLDFDGDLYGSVVELTVGRRIRRQRTFRGPDALVAAMRSDERRARAVLARS

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Crispr_ID: NZ_CP017580_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017580_4

1226591-1226670

Orphan

Consensus_repeat	Method
CCCGGTCCCGCCCAGGCCGGTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017580_4

>merge|NZ_CP017580|4|1226591-1226670|CRISPRCasFinder
GCCGCTCGGCGCCAGCCCGGTCCCGCCCAGGCCGGTCCCGCCCGCTCGAGCGCCCGCCCGACCCCGCCCAGGCCGGTCCC

>NZ_CP017580|4|4|1226591-1226670|CRISPRCasFinder
GCCGCTCGGCGCCAGCCCGGTCCC	GCCCAGGCCGGTCCCGCCCGCTCGAGCGCCCG
CCCGACCCCGCCCAGGCCGGTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017580.1\|WP_070419255.1\|1224543_1225533_-\|hexose-kinase	unknown	unknown	gnl\|CDD\|274464
NZ_CP017580.1\|WP_181015153.1\|1219212_1220343_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP017580.1\|WP_070417069.1\|1225562_1226351_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP017580.1\|WP_070417073.1\|1235379_1236867_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|274398
NZ_CP017580.1\|WP_070417064.1\|1216952_1218005_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP017580.1\|WP_070417071.1\|1230371_1230926_-\|DUF2231-domain-containing-protein	unknown	unknown	gnl\|CDD\|370772
NZ_CP017580.1\|WP_070417068.1\|1222350_1224477_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|182066
NZ_CP017580.1\|WP_083295088.1\|1231132_1233301_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274529
NZ_CP017580.1\|WP_070417062.1\|1215431_1216190_+\|HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319784
NZ_CP017580.1\|WP_070417063.1\|1216252_1216876_-\|phosphoribosylanthranilate-isomerase	unknown	unknown	gnl\|CDD\|238237
NZ_CP017580.1\|WP_070417074.1\|1236977_1239761_-\|glycoside-hydrolase-family-2-protein	unknown	unknown	gnl\|CDD\|225789
NZ_CP017580.1\|WP_070417070.1\|1228846_1230172_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270450
NZ_CP017580.1\|WP_070419258.1\|1234898_1235171_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|234797
NZ_CP017580.1\|WP_083295086.1\|1220391_1222098_+\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|119333
NZ_CP017580.1\|WP_070417065.1\|1218203_1218407_+\|DUF2945-domain-containing-protein	unknown	unknown	gnl\|CDD\|378576
NZ_CP017580.1\|WP_083295409.1\|1226897_1227644_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP017580.1\|WP_070417066.1\|1218411_1219128_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP017580.1\|WP_070417072.1\|1233349_1234768_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP017580.1\|WP_083295087.1\|1227832_1228843_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP017580.1\|WP_070417075.1\|1239979_1240378_+\|pilus-assembly-protein-CpaE	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017580.1\|WP_070419255.1\|1224543_1225533_-\|hexose-kinase	gnl\|CDD\|274464	TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family. This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.	1.80527e-85
NZ_CP017580.1\|WP_181015153.1\|1219212_1220343_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.4126e-31
NZ_CP017580.1\|WP_070417069.1\|1225562_1226351_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	8.08015e-84
NZ_CP017580.1\|WP_070417073.1\|1235379_1236867_-\|sugar-transferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	9.04803e-141
NZ_CP017580.1\|WP_070417064.1\|1216952_1218005_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.742e-88
NZ_CP017580.1\|WP_070417071.1\|1230371_1230926_-\|DUF2231-domain-containing-protein	gnl\|CDD\|370772	pfam09990, DUF2231, Predicted membrane protein (DUF2231). This domain, found in various hypothetical bacterial proteins, has no known function.	7.67534e-06
NZ_CP017580.1\|WP_070417068.1\|1222350_1224477_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	1.97557e-119
NZ_CP017580.1\|WP_083295088.1\|1231132_1233301_-\|AAA-family-ATPase	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_CP017580.1\|WP_070417062.1\|1215431_1216190_+\|HAD-IIB-family-hydrolase	gnl\|CDD\|319784	cd02585, HAD_PMM, phosphomannomutase, similar to human PMM1 and PMM2, Saccharomyces Sec53p, and Arabidopsis thaliana PMM. PMM catalyzes the interconversion of mannose-6-phosphate (M6P) to mannose-1-phosphate (M1P); the conversion of M6P to M1P is an essential step in mannose activation and the biosynthesis of glycoconjugates in all eukaryotes. M1P is the substrate for the synthesis of GDP-mannose, which is an intermediate for protein glycosylation, protein sorting and secretion, and maintaining a functional endomembrane system in eukaryotic cells. Proteins in this family contains a conserved phosphorylated motif DxDx(T/V) shared with some other phosphotransferases. This family contains two human homologs, PMM1 and PMM2; PMM2 deficiency causes congenital disorder of glycosylation type I-a, also known as Jaeken syndrome. PMM1 can also act as glucose-1,6-bisphosphatase in the brain after stimulation with inosine monophosphate; PMM2 on the other hand, is insensitive to IMP and demonstrates low glucose-1,6-bisphosphatase activity. Arabidopsis thaliana PMM converted M1P into M6P and glucose-1-phosphate into glucose-6-phosphate, with the latter reaction being less efficient. Arabidopsis thaliana and Nicotiana benthamian PPMs are involved in ascorbic acid biosynthesis. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.48124e-42
NZ_CP017580.1\|WP_070417063.1\|1216252_1216876_-\|phosphoribosylanthranilate-isomerase	gnl\|CDD\|238237	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric, monofunctional and thermolabile, but in some thermophile organisms PRAI is dimeric for reasons of stability and in others it is fused to other components of the tryptophan biosynthesis pathway to form multifunctional enzymes.	3.67848e-69
NZ_CP017580.1\|WP_070417074.1\|1236977_1239761_-\|glycoside-hydrolase-family-2-protein	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	2.51075e-70
NZ_CP017580.1\|WP_070417070.1\|1228846_1230172_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270450	cd14747, PBP2_MalE, Maltose-binding protein MalE; possesses type 2 periplasmic binding fold. This group includes the periplasmic maltose-binding component of an ABC transport system from the phytopathogen Xanthomonas citri and its related bacterial proteins. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.83051e-110
NZ_CP017580.1\|WP_070419258.1\|1234898_1235171_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|234797	PRK00575, tatA, Sec-independent protein translocase subunit TatA.	9.78568e-18
NZ_CP017580.1\|WP_083295086.1\|1220391_1222098_+\|beta-N-acetylhexosaminidase	gnl\|CDD\|119333	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	0
NZ_CP017580.1\|WP_070417065.1\|1218203_1218407_+\|DUF2945-domain-containing-protein	gnl\|CDD\|378576	pfam11160, DUF2945, Protein of unknown function (DUF2945). This family of proteins has no known function.	8.03808e-17
NZ_CP017580.1\|WP_083295409.1\|1226897_1227644_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.26044e-78
NZ_CP017580.1\|WP_070417066.1\|1218411_1219128_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.16708e-45
NZ_CP017580.1\|WP_070417072.1\|1233349_1234768_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	5.95623e-57
NZ_CP017580.1\|WP_083295087.1\|1227832_1228843_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	9.64903e-72

>NZ_CP017580.1|WP_070417069.1|1225562_1226351_-|DeoR/GlpR-transcriptional-regulator
MYATERHDAIAAALQDAGRVSVADLAEHFDVTTETVRRDLDALESAGLLRRVHGGAVPVGRSSVVELSVAEREGQHNSAKSAIARAAMRLVPPTFTGSIALDAGTTCAAVAAELARWEPATAGATLTVITNSVPIAATLQHSEHVELHLLGGRVRGVTSAAVGTATVEQIGALRPDIAFVGTNGLSAGFGLSTPDEYEAAVKGAYVLAARRSVVLADAAKHGVEALMRFARLDEIDTIVTDQEPPADLAGALAEADVEVVVA
>NZ_CP017580.1|WP_070419255.1|1224543_1225533_-|hexose-kinase
MSTRIVTVTPNPSLDRTIELAGELQRGAVQRATRSTAEPGGKGVNVSRVVVASGGDTVAVLPGDELDPVLLGLATRGIPTAALPIGAPLRSNVTVTEPTGTTTKLNEPGPSLAGRLEDLAALVADTAGATATGPVARWVVLAGSLPPGLPDDALAVLVRAVRQRHGDDVRIAVDSSGVPFTALLQSGERIDLVKPNAEELAEVVGGDPDEFERDVDAAAIAAQRLRDKNVGTVLLTLGSAGAVLVTEDGSYAAAAPRIVARSTVGAGDSSLAGYLLAEVAGQSPEQRLAQAVATGAAAAALPGSDVPALDHTDPSSIEVRALERAPEPA
>NZ_CP017580.1|WP_070417068.1|1222350_1224477_-|PTS-sugar-transporter-subunit-IIA
MSVNTSPRLISVQLVGLDEDLGATSSDVIRVLADRVAATGRAADGASLAADAIKREASVGTGVPGGIAIPHARSASVSEPTLAMSRLARTVSFGAPDGDADIVFMIAVPEGADKDHLTVLSTLARALIREDFTAALRAAATPQEIVDLVDREVSGEVAQAGVGNASSASSATATGQEARPAAATHAADGDAAGSTAGARKVLVGVTACPTGIAHTYMAADALVAAAQRAGAEMHVETQGSSQVEPLDPALIARADAVVFAVDVDVRDRGRFAGKPLVAGPVKRGVDEPDKMIAEALRAADDPNAARVHGNAAEAGSSTAKDEHFGQALKRWLLTGVSYMIPFVAGGGLLIALGFLLAGYGIALTHGDSGQNNAVYTLTNYTLLNLPPEGLAYYLGAAAFQIGGVSLGFLVAALAGYIAYAMADRPGIAPGFVAGSIAVFMNAGFLGGLIGGLIAGAAAYWIGRIPTWRWLRGLMPVVIIPLFASIIASGLMLLVLGGPIAWLMTQLTEFLNSLSGASAILLGIILGLMMAFDLGGPVNKVAYAFAVAGLGAGSATNVVPFEIMAAVMAAGMVPPLALALASTVLYRKGFTKPERENGKAAWLLGASFISEGAIPFAAADPLRVIPASMVGAAVTGAISMAAGVTSRAPHGGIFVFFAIGDVAMFIVAILAGTVVSALVLVGLKKWVRRAPAADAAVSETADDRVAVAV
>NZ_CP017580.1|WP_083295086.1|1220391_1222098_+|beta-N-acetylhexosaminidase
MVDSDMLIPRPRRTEPGAGAFAITPSTRIAADAASESVRLYLQQTLRGSTGLPVRDAVAGVDTAHTDVIALRVADDDTLPTGPAGDRSESFRLRVTADRVEITGGGPAGVFYGVQALLQSLPADVYRKGRVGTGPWTLPAVTVEDAPAFAWRGVMLDVARHFHTKHEVMRVIDQLAAHRLNRLHFHLTEDQGWRIEIRKYPRLTEVGSWRKESQVGAHVPDADGVLHPAAFDGRPHGGYYTQDDIREIVAYAADRFVTVVPEIETPGHVRAALAAYPSLGVSGEPIDVWTEWGIAEDVLNAEESTIAFFQDVLDEVIALFPSEYIGVGGDECPKVQWEDDPRTQERIRELGLDDEEQLQAWIIGRLASHVESHGRRAFGWDEILEGGTLSKSATVLSWRGLTGARTAAKRGHDVISAPDDQVYLDYRQSDLETEPIPVSIVLSVDDVFAFDPVPADLTDAERAHVIGGQGNMWTEHVDTARKLDYQLFPRVAALAEALWSADVTGPRDAAEFRGRLAEHLARLEAMGIDYRHDAGPFPWEQRPGVPGRPHSREERAAYIDAVTANIAD
>NZ_CP017580.1|WP_181015153.1|1219212_1220343_-|ROK-family-protein
MSTLPNGVVGSTPGMLRLINSRALLAELFRDDGSHTVTELGQTVGLSRPTVEAALADLVDEGWVTEAEAIATPNKAGRRAKRFRADAGAGSVLGVDLGLHGIVGLRSDLRGRQLARVEEVYTDLASAEQAWESVQDVVRRLVEGTDPSRLLAATFGVPAVVDRSGEIDYTVAVPQWVERRVPGRIGDLFPTATTFFDNDAKLAATAEAMWGRFRGVQDGLYLVMGRQIGAAYLVDGSLARGARGAAGEMGGLASTGWPDAPARLEARITPGTDVESVMASAGQGDPDAAAAVRALAADVAPGVVQLIATIDPEVVVVGGEVLPAAPVFCEALTEIVTPQLRHPVEIVPSTVGRDAVARGALARSLTHVRTTHMGLG
>NZ_CP017580.1|WP_070417066.1|1218411_1219128_-|DedA-family-protein
MTVAAGDSAADPEMGGLSGLVLQLIDALGEWGVALMLFVETVFPPIPSEVILPLAGFLAGAGRMNLVLVLLLATLGSYLGALVLYWLGAVIGFERTTRWLGKLPLVDEDDFRKAADWFHRHGKSAVFFGRFVPIVRSLISLPAGADRMHLGTFSVFTIIASGIWNSALVLLGAAFGTQYDKVEQYTEWIDRVLYVAIAVVVVTFVVRRVRRIRAERNQRTEHGAVAARGRRRAEPAGD
>NZ_CP017580.1|WP_070417065.1|1218203_1218407_+|DUF2945-domain-containing-protein
MALSKGDTVHWNTSQGKTTGTLVQKRVSDFEFDGQSFKPSDDDPYWIVESEKSGKRAAHKESALTKA
>NZ_CP017580.1|WP_070417064.1|1216952_1218005_-|serine/threonine-protein-kinase
MTLLNDTRSETVLSGRYRLVKLIGTGGMGSVYEARDEHTYRAVAVKLFATPESMTTADRVRQEREIRLLSMLSHPGLIPLYDAGTHDFEDGPHRYIVMELIADTTLLRRLAGGALHNYEVADLGAQLADALAYVHSRGIVHRDVKPANILISDEGSSGFARTVKLTDFGVAHFVDGSRLTNDGTIIGTAAYLSPEQVAGEPIGFATDVYSLGLVLLEALTGKQEYSGTLIEAALARLRHDPEIPDGIAPEWRDLLAKMTARDPDRRPTAVAIANALRGGSAQITGPVPLGPQRVKHKRDHRLHRAAHRHAKRGTFVTVRRWRRRNVLVGSFAAFGVLVACGASYVAGTLH
>NZ_CP017580.1|WP_070417063.1|1216252_1216876_-|phosphoribosylanthranilate-isomerase
MTDQRWIKICGLSTPATVDAAIDAGADAVGFVFAAGSPRTVTADLAKELVERVPDGIDAVGVFRDQEIDEVVGIASAVGLTTLQLHGGESATDFARARDAGFFTIRAVAAEDYLAETPEQRASYDHDLLLLDAAVPGSGRLIDPASITGKVDEAWILAGGLTPANVVAAIESLDPDGVDVSSGVESERGVKDEAKIRAFVEAVRSIP
>NZ_CP017580.1|WP_070417062.1|1215431_1216190_+|HAD-IIB-family-hydrolase
MTTPRLVAFDLDDTLAPSKSALDTRMLETFASLLEVVPVAVISGGNFQQFEQQLVAPLRRRDGLVLDDLHLLPTCGTAYYRWTGDDWALQYAEDLTDEQKARALAAVEAEAKAAGFWESETWGPILEDRGSQITFSALGQSAPVDVKKQWDPTGAKKDELRRRVQAELPDLEVRSGGSTSVDITRKGIDKAYGMQRLAEITSVALDDMLFVGDRLDPEGNDYPVKALGVPCHAVEGWEDTDAFLTELIPTLR
>NZ_CP017580.1|WP_083295409.1|1226897_1227644_-|carbohydrate-ABC-transporter-permease
MVNTAFKPSDEVTTLTPIWLPLRPTLENFTRALTQDGFLVYLRNSAIVVVAAVLLSIVVGFLASAALSRFRFRGRRAILVAILFVQMIPSGALLIPLFLSFQSLGLLNSYIGLILAYVASVLPFSIWVMRGFFVAVPVEIEEAAKVDGAGTFRILWSVLFPLVMPGVIATSVFAFIAAWNDYLTAYVMLKDQGMYTLPVWLAGFSTNKGTDFGGLMAASVLFSIPVVVFFLIVQRRLVSGMTAGAVKG
>NZ_CP017580.1|WP_083295087.1|1227832_1228843_-|sugar-ABC-transporter-permease
MTSTAERVPGSAQAEPGTRRGSTGRRGPTGPGGRAGRRSLTSSRAPLVLLAPAALLLLALVVYPLVRLVVISFQDYGLRAIFTGQAGFAGFTNYTNVLTDASFWPVMLRTVLVTGAMVIGTIGIGMAVSQLLTRLGVVMRTVVSVVLVLAWAMPNVASSLVWQWLFQPFYGVLNWLITQLGVFGDHTQDNWASSPGQALTIVLSLVIWQAVPFVALTLYAAQSQIAPEYYEAGALDGASAWAMYRSITLPALVPTLLLVTILSVIWDFNVFNQIWLLTKGGPEDTTLTLGIWTFVKSFVSNAYGQGAAIAVISTLILGALTSYYIRRLVRSGEEDL
>NZ_CP017580.1|WP_070417070.1|1228846_1230172_-|sugar-ABC-transporter-substrate-binding-protein
MTRTRFAALGALALAGALALTGCSAGSNGASDGGTKSIGTPDGKGKTLTVWIMNGDLSPKILDVAEKQFTKATGAKVKLQLQQWDGITTKLTTALAQKDAPDVVDLGNTQVPVYAATGGLMDLSPYKDELADGQTWLSGLEGPATVDGKLYGAPLFAGNRAVIYNKKMWADAGVTDVPKSYDELTADLDKVKAKNPQADFSAFYMPGQYWYGGLQWVWDAGGQIATEKDGKWKGAIDSADAVKGLTAWKDFQNSYSAKSTQDINTDKPAESDVFAQGNTSAILGSAWEIGSITTAKPELKDQIGTFAMPSSTAGKTQPVFLGGSDLGIPSKSANQDLALYYTKILTSKKFQQDQVFGVDGWEPNSTQLLDAVAGDVDELHKPYFEAASTSRPTPATPGWATIEGDSTFQTMFADVATGRKTPKQAAEGFSEHLTTALNAQQ
>NZ_CP017580.1|WP_070417071.1|1230371_1230926_-|DUF2231-domain-containing-protein
MPEIRAFRRLTDAVEHASVLDKAVDIDRSVVNALAKPKALRQLLHGVPFGHPLHPLMVQVPLGAWISAAVLDLIGGKANARAAKTLVGVGLVSSGSASVAGYVDWSELDREQLRTGWVHQAVNWVGISLYGLSWMQRKSGNHGAGKLLGFAGLAVVGVGGYLGGHLAYRQRAGVSQHGEVPFGA
>NZ_CP017580.1|WP_083295088.1|1231132_1233301_-|AAA-family-ATPase
MANLQGAPDSQERQKTALEQYGVDLTAIARNGKLDPVIGRDAEIRRVSQVLTRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVADSLKDKRLVSLDMSALIAGAKYRGEFEERLKAVLKEINDSDGQVITFIDELHTLMGAGGGEGSVAASNMLKPMLARGELRLIGATTLDEYREYIEKDAALERRFQQVFVGEPSVEDTVAILRGLKERYEAHHKVTINDSALVAASSLSNRYISGRQLPDKAIDLIDEAASRLRMEIDSSPVEIDELKRTVDRLRVEEFALKQEKDDASKARLETLRAELASRETLLGELEQRWQAERASLNRIGELKQQLDDLNMRSQRAQREADYELVSRIEYSEKPRIEAELAAAEQAEQADRMVNDSVTDEDIAAVIAQWTGIPLGRLLQGETEKLLHLENELGRRIIGQRSAVSTVSEAVRRTRAGISDPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDEKALVRIDMSEYGEKHSVARLIGAPPGYVGYEAGGQLTETVRRRPYSVVLLDEIEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFRNTILILTSNLGSQFMTDQSITDVQREEAVRELVQQAFRPEFINRLDDIVVFQALTQEDLGQIVSLYVDRLARRLTDRRLELAVTPDARAWLAERGYDPVYGARPLRRLMQRQIDDRLARAILAGDVRDGDTVRVDVAAGGDKLTVEPFELAEIVEE
>NZ_CP017580.1|WP_070417072.1|1233349_1234768_-|MFS-transporter
MTTPAPAATAPLRDDRRVVLVVAILSSFVVGLDSSVVNVALPAIRDELGGGLVVQQWTVDAYLVTLGSLILVAGSLSDLFGRVRIITWGLVVFGIASIVCAIAPTGEVLIVARALQGVGGALVTPSALALIVAAFRGAAQAKAIGTWTAWSSAATILGPVVGGLVVDGIGWRWIFVLTAVPIAVTIPLVSRISADVRVGPRAHVDVVGAVLAVVGVGGVVLGLIEQERLGWGAPVVLAALVLGGAALVAFVPWELRVTRRHGAPLVPLELFRARNFTVGNLATLSIYGALGMVFFVVTLFLQEVWRFPAWLAGLATLPPTVMLLLLSTTVGSLAGRWGPRWFMAAGPAIAAVGALLLLFAGDEPIGYWWSVLPGLVLVGAGIALMVTPLTSAVLGSVPQSEAGAGSAVNNAIARIAGLVMVALAGIVLGGAVSVEGLHRAMVVMALLLLAGALVSAVGVRNPRRESPAANAS
>NZ_CP017580.1|WP_070419258.1|1234898_1235171_-|twin-arginine-translocase-TatA/TatE-family-subunit
MLGNLGGVHLLIILGIVILLFGATKLPALAKGLGQSINIFKKEMGDDEKKAKGTDPGVQTTTVTNTAAEAAPQPVVNPGPSVQPNSDSRN
>NZ_CP017580.1|WP_070417073.1|1235379_1236867_-|sugar-transferase
MSLAMRPLSAVSRSVEVVGRPTRSRTRRSRATGFGLARLDLGLLLVAFAVAHVVRFPGELPAGSSAAGWTEFVVAPVMIVAWMVLLTVSRSRDPRIVGVGGDEFRRLITASLVTVATVAGVAYAVQVDLARGYVAIAFPLGLLLLAIGRKAVRTVLARRRCRGEGLQDVLLVGDLDDVTYVGRRIAATPAAGYRVRAIISDCVRAGSRVPLGDTSVPVIDGVDAVLDRAQSEPVAAVVVAGAIRGGHERLRRLGWQLEAHGVELVVSSPLADIAAGRVHERPVDGLPLMHVETPDYRRRIGKRTLDVVGAGIGLLLLAPVFAVIALVIRADDRGPVFFRQTRVGRDGREFPILKFRTMCVDAEARVAALEQANEGAGPLFKMKHDPRITRVGAFLRRTSLDELPQLWNVLTGSMSLVGPRPALPREVALYEDFADRRLLVTPGITGLWQVSGRSDLDWADGVRLDLHYVENWSFVHDVVILARTIPSVLRSRGAY
>NZ_CP017580.1|WP_070417074.1|1236977_1239761_-|glycoside-hydrolase-family-2-protein
MTLEREELRDGWTVTMAGEAPPAGAPADVVGRTIGATVPGQVHTDLEREGLLADPTFDRNEDGAKWVGRADWSYQRTVDVDPRGFERVDLVCDGLDTVAELSLDGVVVGTTRNMHRRYRFDARDSTGGVGRGEKTLELLFESPYREAGRVAAKAGSMPGPYDEPFPYIRKMASNFGWDWGLTAVTSGPWRPVAIERWSTARLRDVRPLVDVEAGEGVLDAHITVERSGLNDLDQDGEDDDLVLVVTVSGATAEGGTTRQRSRAQLTPRDDETVVTVRVPEVQRWWPRGYGAQDRYDVVVELQTVDGEVLDRSTFRTGFRSTRIETTSDSIGKPFNVHVNGTLIDVRGVNWIPDDVIVSRVSRDRVEDRLRAAADLNVNLVRVWGGGVYESNDFYEVCDELGLLVWQDFPFACAAYPEGEPIRSEVIAEARDNVARLARHPSLVLWNGNNENIWLHEVDGWEASLEGRGWGLDYYLDLLPTIVDAVDPSRFYTVASPWSGSESLPANDVDHETHHSWDVWNRLPDTAYRDSVPRFVSEFGWQAPPAWRTLRDAVRDSPLAVDSPGVVHHQKAADGMGKLARGIAPRFGSVAPAEFDRWHYLTQLQQARAIATGVEHWRTHWPRNRGVVVWQLNDLWPVSSWSAIDSAGRLKPLAHELRRLYDDVLLTIRPVSTVAAAVGSGPAGGSAPGGGSAPAGASGPGGGSAPAGASGSAGEPSGQPGGADRPTTSASVGETADLGDLADTLSLGVSPGSFGNAPIEVAVRSTRTGHDSVVRVRRVTLAGTVLAEASLPVRLSAAGVAVVALPESVGVVDDPTNELVVADMDWRRAVWTPGPDKDMRWEPARYRTAFTAAPDGDGLDLVVEAEGLVRDLLFQPDRVAPGGTVDRGFMTLLPGERVAYRLRGVTEADIPALTAAPVAWTLADVLDD
>NZ_CP017580.1|WP_070417075.1|1239979_1240378_+|pilus-assembly-protein-CpaE
MISVALATALRDAGLRWHPTTGDRFVIDKPGVDDDVYTVSEMTVERHDYPSGTVLGFNGTTEWALDSVDAAESLWLPREDQLRGLLGPAFVSLSAGFTVVATVDGADRSFTSDDAAEAYGLALQAYITAALA

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Crispr_ID: NZ_CP017580_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017580_5

2609085-2609178

Orphan

Consensus_repeat	Method
GTCGATCGACGGGCGGAGTGTCG	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_CP017580_5

>merge|NZ_CP017580|5|2609085-2609178|CRISPRCasFinder
GTCGATCGACGGGCGGAGTGTCGGAACATGCGCACGCAGAGGATGCGCGGGCACAATGCGACAACACGCGTGTCGATCGACCGGCGGAGTGTCG

>NZ_CP017580|5|5|2609085-2609178|CRISPRCasFinder
GTCGATCGACGGGCGGAGTGTCG	GAACATGCGCACGCAGAGGATGCGCGGGCACAATGCGACAACACGCGT
GTCGATCGACCGGCGGAGTGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017580.1\|WP_070418169.1\|2612756_2614238_+\|mannitol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223324
NZ_CP017580.1\|WP_070418171.1\|2615123_2615495_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319925
NZ_CP017580.1\|WP_070418172.1\|2615537_2616089_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP017580.1\|WP_070418162.1\|2605601_2605862_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070418166.1\|2608542_2608986_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP017580.1\|WP_070418167.1\|2609262_2611899_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP017580.1\|WP_070418173.1\|2616129_2617122_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP017580.1\|WP_070418164.1\|2607119_2608214_-\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
NZ_CP017580.1\|WP_070418161.1\|2604559_2605345_+\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NZ_CP017580.1\|WP_139219791.1\|2611972_2612611_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017580.1\|WP_070418163.1\|2605918_2607013_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_083295234.1\|2618143_2619007_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|372253
NZ_CP017580.1\|WP_070418157.1\|2598489_2600841_-\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|223808
NZ_CP017580.1\|WP_156794853.1\|2619009_2620269_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP017580.1\|WP_070418174.1\|2617235_2618147_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213235
NZ_CP017580.1\|WP_175473687.1\|2608266_2608479_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070418159.1\|2601855_2603025_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP017580.1\|WP_083295233.1\|2603107_2604532_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237233
NZ_CP017580.1\|WP_070418158.1\|2600935_2601859_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP017580.1\|WP_070418170.1\|2614332_2615028_+\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253

Protein	Function_ID	Function_description	E-value
NZ_CP017580.1\|WP_070418169.1\|2612756_2614238_+\|mannitol-dehydrogenase-family-protein	gnl\|CDD\|223324	COG0246, MtlD, Mannitol-1-phosphate/altronate dehydrogenases [Carbohydrate transport and metabolism].	0
NZ_CP017580.1\|WP_070418171.1\|2615123_2615495_+\|VOC-family-protein	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.91831e-20
NZ_CP017580.1\|WP_070418172.1\|2615537_2616089_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.50405e-10
NZ_CP017580.1\|WP_070418166.1\|2608542_2608986_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.69437e-20
NZ_CP017580.1\|WP_070418167.1\|2609262_2611899_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	4.78146e-83
NZ_CP017580.1\|WP_070418173.1\|2616129_2617122_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	2.75052e-21
NZ_CP017580.1\|WP_070418164.1\|2607119_2608214_-\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	2.05443e-164
NZ_CP017580.1\|WP_070418161.1\|2604559_2605345_+\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	7.84409e-42
NZ_CP017580.1\|WP_139219791.1\|2611972_2612611_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.97626e-09
NZ_CP017580.1\|WP_083295234.1\|2618143_2619007_+\|ABC-transporter-permease-subunit	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	1.20333e-05
NZ_CP017580.1\|WP_070418157.1\|2598489_2600841_-\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|223808	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism].	4.84844e-80
NZ_CP017580.1\|WP_156794853.1\|2619009_2620269_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.93543e-37
NZ_CP017580.1\|WP_070418174.1\|2617235_2618147_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	5.35581e-94
NZ_CP017580.1\|WP_070418159.1\|2601855_2603025_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.46773e-61
NZ_CP017580.1\|WP_083295233.1\|2603107_2604532_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|237233	PRK12853, PRK12853, glucose-6-phosphate dehydrogenase.	0
NZ_CP017580.1\|WP_070418158.1\|2600935_2601859_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	1.16246e-34
NZ_CP017580.1\|WP_070418170.1\|2614332_2615028_+\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	7.4706e-46

>NZ_CP017580.1|WP_070418166.1|2608542_2608986_-|MarR-family-transcriptional-regulator
MTETDVDPLALDRQLCFALAATSRSVIGLYRDLLEPMGLTHPQYLVMLALWEQDPRSVREIARELRLDSATLSPLLKRLEASGYVRRTRSTTDERQLEVSLTVAGRSLREQARAVPLAVADRLGWPLERLEALKDELTELLERVDTV
>NZ_CP017580.1|WP_175473687.1|2608266_2608479_-|hypothetical-protein
MGRFGQWYERWNSTLIAKMGPSQIGAGHPEGIDDRTIDRGCPICGQPLSQHQVIRPEGQVRSSTLVCPRA
>NZ_CP017580.1|WP_070418164.1|2607119_2608214_-|alkene-reductase
MKLFEPADFGALPLSNRIVMAPLTRTRAGEHGIPNDLLVEHYAQRAGLGLIVTEGTWPVQEGRSYPGQPGIETDEQIAGWRRVADAVHAEGGRIVMQLMHGGRVSHTAISGTPRIVAPSAIAAPGQTHLPDGSKADMPVPHALTTDEVREAVQGFVRAARNAIAAGLDGVEVHGANGYLVHEFMSAASNTRTDEYGGSPENRARFAIEVTTAVAEAIGADRTGIRLSPEHGIQGVLESDPADVHAVYTAVAEGLAPLGLAFVDILHAEPTGDLVQHIRRTAGAPFIANSGFSALTTRDEAIALVTQGHADAVGVGRAAIANPDLAYRWEQDTELNEPRPELFYGNGAEGYTDYPTLTEVRAQVA
>NZ_CP017580.1|WP_070418163.1|2605918_2607013_-|hypothetical-protein
MQALRTPIDTTALTEPVRRRDARRTWKALVAEHPEARDLVGLVRRIVLGAGALCLPIGLLAFTLVITATVAEGGEDVATAVLVQSVIGAFLGLAGVLCTWAWIRVRRRRPRKRVHHRLARFAAANGMTYSPGPTGTRRDAPLRRRGALNCYRVLRTPEPRGLEFANHELVRSTMTNTSPAFGGYCAMRLPVALPNILLRSEEGPRRPLHTSSVVRGSQVLSLEGDFDRYFRLYCPAGYERDALYLFTPDVMARLVDHLRGLDVEIVDDWMYLISARDLITDRPERWEALAAAVDALDDRVERWARWRDERSEAAVSADDGPVVRVREVAKPGRRLRTTWGAGTVLIVGTVTLGFVALIVAINLS
>NZ_CP017580.1|WP_070418162.1|2605601_2605862_-|hypothetical-protein
MDNGWRDGLLVVWIVSLLAAIGLWVSAIVIFGKGPDSVELVPLAASLAGAAAVVSFWWFVSLLLWLAVSAVVREHEKDRQQAARLR
>NZ_CP017580.1|WP_070418161.1|2604559_2605345_+|dienelactone-hydrolase-family-protein
MTTIDDVLQTVPEPAGADVRVDPVRYDHEGTPLLGVLAKDAAIAGRRPAVLVVHDWHGVNGHVEARVTMLARLGYVAFGADVYGEGVRPGDDTAAQVAGSFYQDLPLMRARVRAGLDRLLGDPDVDPARVVVMGYCFGGSAALELARTGADLVGAVSFHGGLLTHDPSDAAAIRAKLLVLTGASDPVVPDESVVAWEDEMRAAPEVDWQLVSYAGAMHAFAVPGTDAPDHGAQYQARADRRSWRALEVFLAEVFDEELAAL
>NZ_CP017580.1|WP_083295233.1|2603107_2604532_+|glucose-6-phosphate-dehydrogenase
MSSLQTSLLILGASGDLSKRLLLPGLATLLEVKDDWDVQLVGAGVEDISDADWKAQVRESFENAQASKNEEDEGAADGGERLSKRLLGVIDASSYRKADVTDADDLRTLLGDCRYDPAIYFALPPAVTEKSCEVLKDLDLPSGTRLALEKPFGTDAESAEHLNDVLHSFLPEERIHRVDHFLGRSTVLNLLGLRFANRIIEPLLSSAHVARVDIVYDETLGLEGRARYYDKAGALVDMIQSHLLQVMAVVAMEAPASIDADDLRTQKELVLRAVRPWGGDVVAAGKRARYTAGTIGDRSLPSYADEDGVDPSLGTETLAQLTLEIANWRWAGVPFTLRSGKALAEQRREIVITFKDSPHVPVGLHGAELPDRLRIWIAPDEMQLELNVNGAGDPYTIDHTSLDVTFNPGRLSAYGEVLAGVLEGDATLSVRGDSAVQGWKVVEPFLQAWRSGKAPLDEYPAGSEGPGSWDNIDC
>NZ_CP017580.1|WP_070418159.1|2601855_2603025_-|Gfo/Idh/MocA-family-oxidoreductase
MSSGYGGRRLRVAVVGTGMIAGVHARAARAAGAEVLGVLGRSPSRSEQVAAQLDLPRGYASLDEVIADAPDVVHVCTPNDQHHPQALAVIRAGINVVCEKPLAIDATEADELVEAARLAGVVATVPFVYRYHPIIREIRGRIADGDLGRVLAVHGHYLQDWMLDEDASSWRVDAGSGGLSRAFADIGSHWCDLVEFVTGERFASVSAATDIVYPTRPAASGPSFSGSPDPDPVADASQRAEVTTEDTAVATFRTGTGRIGNVVISQVASGRKNRLWFEVDGTRGSAAFDQEQPESAWFGNERGAQIVVRDPSLGVPDQRRLAVVPSGHPQGYLDAFAAFVADTYDAVRSGPDQDGWPEGLPTFADGARSAHIIDAVVGSAADGTWGEIR
>NZ_CP017580.1|WP_070418158.1|2600935_2601859_-|sugar-phosphate-isomerase/epimerase
MKLGMLTACLPGWSLDRIAAFAQQQGYERLEVGVWPGTGGRDFEAAHLPVATFTDDDAQATRELLDRTGLEISAFAYYENNLHQDLDRRAEVKEHLFHAIDAAQVLGVPYVGTFIGRDNSRSVRENMRLGDQVLPELVDHAGERGVRLIIENCVMEGWHPDGYPGNLAYSPELWDWVTGLGFGLNWDPSHLTWIGIDPVETILPFAEHIVHAQAKDVELFPRKRDEYGFFGKVDKGDDPWDMGWWRFRVPGRGVVDWPHVVDRLYEAGFDGTLSVEHEDPLWGGTDEKVLEGLRIAHRTLRPLIAVE
>NZ_CP017580.1|WP_070418157.1|2598489_2600841_-|bifunctional-metallophosphatase/5'-nucleotidase
MNAHTSPRRRRRLVGGAALATAGVLVALSVPSAAIAADGDTTIDLYDVNDFHGRIAQSISQTDGKPTPRDGDAAGAATLAGALEQLRGPDLTTSAFVSSGDNIGGSTFESFIQDDQPTIDVLNQMDLSVSAIGNHELDKGQDDLRDRVIGPQGDRNAQWDYVSANILDTATGEPAFDPYAIEEISGKRVGFIGATVDLVGQGLVSPAGIEGLEMGDITTEVNKVAADLTDGVEGNGEADVLVLLVHDGAESAAATDLDGDSDFARAVRDVDPRVSAILSAHTHQTYVHQAKVGDGPATRPVIQTGSYGFNLGHVQLTVAADGTVTSTVAENIRLVDGTFTPDADVQATVDDAVAEAEVLGAVELGTVDRDLGRAKQRNGSENRGGESTLGNFVAEVQRAATTRQGSQIAFMNPGGLRADIASGTVTYKEAAVVQPFANTLVVLDLTGAQIRQALEQQWQPSGSSRPFLKLGASDGFGYTYDPGAPAGSRITTMTLDGTAIDADTIYKVTVNSFLAGGGDNFAAFKQAAAKQDSGKVDLEAQVEYFRADPTVTVAHDQRSTGIRTTATPDGGFQPGDRVTIELSSLTFSNEPDQGGAVTVSAGGKELDRATIDTTIVDTTDEQGQATLSFLVPGASTDPATALGRAAGTTTLAAAVAPAATTDEPLVVTLPNGQTITLAVTIPVAAAVDPTDPADPTDPTDPGTPGTPGAGGGDGDDGAVGVDTDGDGVVDGTVPANAGGALAYTGADIAAPAVAAGLLLLAGLVALVLARRKRAEREATDLTD
>NZ_CP017580.1|WP_070418167.1|2609262_2611899_-|MMPL-family-transporter
MAGLLYRLGRFSARRHWLVIIAWVVIMGIAGVTYSLFAGTISSSITIPNTKTSQVQDELADKFPSANGGTGTIVFETTNGKAFSDAQKSDVADFLQKVEKLDGVKGATSGFETQQQLDDQRQKIVDGREQITDGRAQIESGQKELDAQKSQLASGKEQIASAQAQLNAQKAQAEAAGGAAAAAAQTQLAQAQAQIDAQQQQITSGEQQIEAAQQKIDDNTKKLDDSEQELEQGSKLLDLSKDIRFVSSNGIAVIGTVQFTKSTYEVPADTKTQIADDAEAADISGVDVYVSNDIAQGVPSILGPGEIGGVIIAAIVLFLMLRTIIGAAVPLVSAVLGVGVASLAALSFSSLVEFISVTPVLGVMLGLAVGIDYSLFILNRHRTQLKQGMGVHESIGLANGTSGNAVVFAGATVIVALLALNITGIPFLGLMGTVGAVAVFFAILIATSFTPALLSLIGMRILRKKERAKIGNTDSTRVPNKPMSTWRAVITLVAGVAVLGTIALPATQMRLGLPTGASESVESSQYKAYKALDDEFGAGQNGPLLVVATLPDSVSEDDVTATEVTIGEAIAKNDDVKAVLPIGASKDRDIIAFQVKPAGGPDSVSTETLVKDLREQTVSTDDGKVTLGVAGNASANIDVSEKLSNVLPLYLVVVVGLSLIILIIVFRSFLVPITATAGFILSVLASFGGLTAIYQWGWLGSVFGVHDPAPILSFLPIIEIGILFGLAMDYQLFLVSGMREAYAHGASAKVAVQRGLHAGRAVVTAAAIIMISVFAGFIFSDSSTIKPIGFGLAFGVLVDAFVVRMLLIPAAMHLLGESAWWFPKWLDRIVPDVDVEGAKLERSHPAGGHESTHTGSHALPVEPDANAHESGHPPAHRA
>NZ_CP017580.1|WP_139219791.1|2611972_2612611_-|TetR-family-transcriptional-regulator
MTLSIDRRAALKAKHRAAILQAARDLVEERGGRGFSVEDLASRADIARRTVFNHFGSLDEVLLAVCEQELSVIIDRFLADMAKTPVGDGSRSSMFDELESAARGADLAPAIAGMYRILGDPGKDDPKAAVLTQTAFARVTERLRDEVARRHPAADALDAALLVESLMSGIVVIAEHWLTTTGPRLDQDALDDWDALLARLVHSVRSGYMADD
>NZ_CP017580.1|WP_070418169.1|2612756_2614238_+|mannitol-dehydrogenase-family-protein
MPVRLSPQHLDEIAASGVAVPSYDRDGITAGIVHFGVGGFHRAHQAMVIDRLLQQGEAREYGICGVGVLEQDRRMATAMAEQGGLYTLVLKHPDGTRESRVIGSIVDYLLAVDDPDAVVEKMAHPDTRIVSLTITEGGYNFDHVTGEFVADEPGVAADLRGDGPPHTVFGLVVEALRRRRDRGLEPFTVMSCDNIQGNGHVAREMFTAYARLQDPAFADWMDEHVSFPNSMVDRITPVTADEDRAWVRDELGIEDAWPVVAEPFFQWVLEDDHPAGRPPYEQADVQIVDDVEPYELMKLRLLNASHQGLCYFGYLSGYRYAHEATQDPAIATFLRRYMDEEGTPTLHPVPGIDLEDYKSTLIERFQNPEVRDTLARLCAESSDRIPKWLLAVVRENLAADRPVTLSAGIVASWARYDEGTDESGEPIQIVDRLAEPLHRIALTQRDDRLAFIRNRQVFGDLVDDDRFVTAYRDALDGLIADGAHATVTRLSRS
>NZ_CP017580.1|WP_070418170.1|2614332_2615028_+|YafY-family-transcriptional-regulator
MNRTDRLYALVEELRAAAPALRSARRLAEHFGVSVRTVERDLRALQEAGLPIWSEPGRTGGYTIDARATLPPLGLTVDEALAVAIGLGTLGASPFRDAARSAARKVTAVLAEDDARRTARLAARVLLLEAGDRTPGPVALAGALTGGRVVRMRYRDATGTETDRTVEPLGYVGKGEDWYLVAWCRLRDGVRAFRGDRVLAVEETDEVAPPRVVRTEELDIPHGVLRPVLGD
>NZ_CP017580.1|WP_070418171.1|2615123_2615495_+|VOC-family-protein
MEFASIRIITDDLDGMVAFYERVTDTTARRPAPVFAEIVTGGLVLALGTPATVAVLGVDAPRAGAAGSAIVEFLVADVDATFDRLQVGPADVVLPPTTMPWGNRSAILRDPDGTLVNLFSRPA
>NZ_CP017580.1|WP_070418172.1|2615537_2616089_-|GNAT-family-N-acetyltransferase
MSSVSLVRLDPTGADRADLIAFLTGEEFPFHVRRTIPRADAEAAVDAGAYRDDEHDTSWLEHAELGRVGIVRLEDLADPVPLFDLRIAGRFRGQGLGVPALRATTDHVFRTLPEVTRFEGQTREDNVAMRRVFVRAGWVKEAHYREGWPVEGGRPVASVGYGVLRRDWETGTTTPVPWDDDER
>NZ_CP017580.1|WP_070418173.1|2616129_2617122_-|alpha/beta-hydrolase
MADHGWREDVLGAPFERLELPLGEDHEGPVVATLVRRRRSAADLLLHARGPLHGVDVLYVHGWSDYFFQVELAERVERLGARFHALDLRKYGRSLRPRQTPGNVDDLATYDEDIAAALDAIAAEHHGETGRRLVPMGHSTGGLTLSLWAARHADRVDGLILNSPWLEFQASAVGRAIVAPVIKLGARRNPLAPMPAVDPGFYTRTVSAAGEGSWTYDQQWRPDRGFPLHPNWLAAVFDGQATVEAGLDLEVPVLVLLSDKSMLQPRWDDGMARADVALNVDVVAHRALSLGSEVTVRRLHGAVHDVVLSAPEVRERAYDAIGRWAASLPR
>NZ_CP017580.1|WP_070418174.1|2617235_2618147_+|ABC-transporter-ATP-binding-protein
MIEIQNLTKRYGEKVAVDDVSFTVRPGVVTGFLGPNGAGKSTTMRAVMGLDSPTSGSAVVDGRPYRELRDPLRRVGALLEAKAVHKGRSAYDHLRALAATHRIPKARVEEVIGMTGLERVAKQRVGGFSLGMGQRLGIAAALLGDPQTLILDEPVNGLDPEGVVWVRQLARSLAAEGRAVFISSHLMSEMALTADRIVVMGRGRVLADTDLADLVASSTERSVSVRTPEPDRLMTAIAGPDVTVTYEDDGALHVRGLGAEQIGEAAAASGIVLHRLASTEASLEQAYLELTHDEVEYRSEVAR
>NZ_CP017580.1|WP_083295234.1|2618143_2619007_+|ABC-transporter-permease-subunit
MSATMTTDRPRTLHQHDAARVRFSGVLHSEWIKLRSLRSTIWSLLVLVLVPIGIGVLLASLADDGGRTVTGDAARNALVQYSTSGATIAVLVVAVIGALVVTGEYGTGMIRSTFSAVPRRWEALAAKGIVLAATVFVTSAVSVWATAFTTLPIADANGVEASLDASVAMPLLGASVYLTLIALLAFAVGVVLRSTAGAIATVLGLMLVAPVVVQLVQGFTNATWLGTLNNLLPQNAGQPLMQFGAEDTSGWHDGVLALGGWSGFAVLAAWVVAASVTALVLAQKRDA
>NZ_CP017580.1|WP_156794853.1|2619009_2620269_+|two-component-sensor-histidine-kinase
MTEPVPGAVHDGAGDLTLPVAPGRIRRWWAGHPRAADVLLILFWGGPEVAFAIGGVWRADSSVTNTVVVLVLVGIAVAGIPFRRTRPQVTVVAGLVSVVAMAWTEAGYSPMLFAAFAACVWWSRAAGWWSIAVASVLGAAATAVRVWVVAPGSGGLGEVFAPALPAFLVIAVLIGTTTGDRRRYTEALIDRARQLARERDQQARLAAAAERARIAREMHDIVSHSVTVMVRLAEGAAAGLPDDDPSATAMRGVADVGRSAMTDMRRMLGVLSEPGAGSGGADAADSLAPQPAVRDLPQLVDGFRALGTPVTLEVAGGPPDDDALQLAVYRIVQEALTNVVRYAPRARAVTATVTTSSDEVVVTVTDDARRTAPAPQIGTGRGLVGIRERVHALGGSVHAGPRPADGWEVRATIPVRKEA

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Crispr_ID: NZ_CP017580_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017580_6

3091112-3091214

Orphan

Consensus_repeat	Method
CAACCGCCTGAAGGCGCGGCGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017580_6

>merge|NZ_CP017580|6|3091112-3091214|CRISPRCasFinder
CAACCGCCTGAAGGCGCGGCGTGTGCCCAAACCGCGCGGTGGCGCGGCGTCGCCTGCTTTCCGTTGTGCGCAGGCACGCGCAACCGCCTGGAGGCGCGGCGTG

>NZ_CP017580|6|6|3091112-3091214|CRISPRCasFinder
CAACCGCCTGAAGGCGCGGCGTG	TGCCCAAACCGCGCGGTGGCGCGGCGTCGCCTGCTTTCCGTTGTGCGCAGGCACGCG
CAACCGCCTGGAGGCGCGGCGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017580.1\|WP_070419519.1\|3081062_3082637_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP017580.1\|WP_022904217.1\|3091900_3092149_-\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP017580.1\|WP_070418505.1\|3085327_3086035_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|379821
NZ_CP017580.1\|WP_070418509.1\|3092905_3093376_-\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|224146
NZ_CP017580.1\|WP_070418502.1\|3080274_3080949_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP017580.1\|WP_070418508.1\|3089583_3091092_+\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|378836
NZ_CP017580.1\|WP_022905932.1\|3094822_3095290_+\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|320684
NZ_CP017580.1\|WP_070418513.1\|3096896_3097574_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP017580.1\|WP_083295296.1\|3092409_3092832_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070418504.1\|3084414_3085143_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP017580.1\|WP_083295297.1\|3093650_3094346_-\|YigZ-family-protein	unknown	unknown	gnl\|CDD\|129359
NZ_CP017580.1\|WP_070418514.1\|3097566_3098910_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP017580.1\|WP_070418507.1\|3089052_3089427_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070419521.1\|3094385_3094826_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_181015098.1\|3078722_3080126_-\|glycerophosphoryl-diester-phosphodiesterase-membrane-domain-containing-protein	unknown	unknown	gnl\|CDD\|370818
NZ_CP017580.1\|WP_070418511.1\|3095286_3096213_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070418503.1\|3082636_3084319_+\|GerMN-domain-containing-protein	unknown	unknown	gnl\|CDD\|184183
NZ_CP017580.1\|WP_070418500.1\|3078087_3078726_-\|DUF4129-domain-containing-protein	unknown	unknown	gnl\|CDD\|379261
NZ_CP017580.1\|WP_070418506.1\|3086193_3088974_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP017580.1\|WP_070418512.1\|3096420_3096633_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017580.1\|WP_070419519.1\|3081062_3082637_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.42978e-56
NZ_CP017580.1\|WP_022904217.1\|3091900_3092149_-\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	4.77775e-27
NZ_CP017580.1\|WP_070418505.1\|3085327_3086035_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|379821	pfam16321, Ribosom_S30AE_C, Sigma 54 modulation/S30EA ribosomal protein C-terminus. This domain often occurs at the C-terminus of proteins containing pfam02482.	1.60358e-23
NZ_CP017580.1\|WP_070418509.1\|3092905_3093376_-\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	7.2291e-72
NZ_CP017580.1\|WP_070418503.1\|3082636_3084319_+\|GerMN-domain-containing-protein	gnl\|CDD\|184183	PRK13615, PRK13615, lipoprotein LpqB; Provisional.	1.64595e-116
NZ_CP017580.1\|WP_070418508.1\|3089583_3091092_+\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|378836	pfam12282, H_kinase_N, Signal transduction histidine kinase. This domain is found in bacteria. This domain is about 150 amino acids in length. This domain is found associated with pfam07568, pfam08448, pfam02518. This domain has a single completely conserved residue P that may be functionally important. This family is mostly annotated as a histidine kinase involved in signal transduction but there is little published evidence to support this.	5.6881e-51
NZ_CP017580.1\|WP_022905932.1\|3094822_3095290_+\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|320684	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase. This family contains peptidase M48 family Ste24p-like proteins that are as yet uncharacterized, but probably function as intracellular, membrane-associated zinc metalloproteases; they all contain the HEXXH Zn-binding motif, which is critical for Ste24p activity. They likely remove the C-terminal three residues of farnesylated proteins proteolytically and are possibly associated with the endoplasmic reticulum and golgi. Some members also contain ankyrin domains which occur in very diverse families of proteins and mediate protein-protein interactions.	0.000373559
NZ_CP017580.1\|WP_070418513.1\|3096896_3097574_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.29099e-84
NZ_CP017580.1\|WP_070418504.1\|3084414_3085143_+\|hypothetical-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	4.16022e-17
NZ_CP017580.1\|WP_083295297.1\|3093650_3094346_-\|YigZ-family-protein	gnl\|CDD\|129359	TIGR00257, IMPACT_family_member_HI_0722, uncharacterized protein, YigZ family. This uncharacterized protein family includes YigZ, which has been crystallized, from E. coli. YigZ is homologous to the protein product of the mouse IMPACT gene. Crystallography shows a two-domain stucture, and the C-terminal domain is suggested to bind nucleic acids. The function is unknown. Note that the ortholog from E. coli was shown fused to the pepQ gene in GenBank entry X54687. This caused occasional misidentification of this protein as pepQ; this family is found in a number of species that lack pepQ. [Unknown function, General].	7.30005e-57
NZ_CP017580.1\|WP_070418514.1\|3097566_3098910_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.27672e-52
NZ_CP017580.1\|WP_181015098.1\|3078722_3080126_-\|glycerophosphoryl-diester-phosphodiesterase-membrane-domain-containing-protein	gnl\|CDD\|370818	pfam10110, GPDPase_memb, Membrane domain of glycerophosphoryl diester phosphodiesterase. Members of this family comprise the membrane domain of the prokaryotic enzyme glycerophosphoryl diester phosphodiesterase.	1.03551e-10
NZ_CP017580.1\|WP_070418502.1\|3080274_3080949_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.26005e-90
NZ_CP017580.1\|WP_070418500.1\|3078087_3078726_-\|DUF4129-domain-containing-protein	gnl\|CDD\|379261	pfam13559, DUF4129, Domain of unknown function (DUF4129). This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.	0.0025644
NZ_CP017580.1\|WP_070418506.1\|3086193_3088974_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0

>NZ_CP017580.1|WP_070418508.1|3089583_3091092_+|PAS-domain-containing-sensor-histidine-kinase
MSTLSDLVLAQGRSSEADVEWLHLLVGDWQLLADLSFADMVLWVPTAEDGSFVAVAHARPSSAATLFYRDIVGQEIREEWREQVTESFVGAKVVDSAEPDWYEDTPTRVRAIPVLRRLSANSAETTERPIAVVTRHSNQDEMRTPSRQELNFTASANDLFGMIATGDFPDIGAPAGPRRGAPRASDGLLRLDTNGIVTFASPNGLSAFNRMGFEGELERKSLAEVTTELIGAQLDVDESLPLVVTGRAPWRADVESKGVTVSLRSIPLRDHGERIGAIVLCRDVTELRHQERELITKDATIREIHHRVKNNLQTVASLLRIQARRTHSDEARTSLQNAMRRVAAIAVVHDTLSTGLSQNVDFDEVFDSVLKLVTEVAASHNTTVRPKKTGEFGVLPSEAATPLALGLTELVTNAVEHGLDGRDGEVEIVAERFDDHLDIQVRDNGRGLPEGKVGSGLGTQIVRTLIQGELGGTIDWHTLTGSGTEVTITIPFRWLTATPGAA
>NZ_CP017580.1|WP_070418507.1|3089052_3089427_-|hypothetical-protein
MGDVPRLSAVPPPTDVEDTARALGLCVAEILTGSREVDSIARWITDEVHRHLQQRAAVAARARQLGSRSRGRALLRVGSVIVCRPADGVAEATVVVHTRSHARAVAMRLEERQGRWRATAVGVL
>NZ_CP017580.1|WP_070418506.1|3086193_3088974_+|preprotein-translocase-subunit-SecA
MANVLEKVLRIGEGRTLRRLKAYASAINDLEDDFASLTDEELQDETKELRERYANGETLDDLLPEAFAAVREAAKRTLGMRHFDVQLMGGAALHLGNIAEMKTGEGKTLVATTAAYLNAIPSRGVHVITVNDFLASYQSELMGRVFRALGMTTGCIIANQSPAERREQYAADITYGTNNEFGFDYLRDNMAWQASDMVQRGHFFAIVDEVDSILIDEARTPLIISGPSSGEANRWFTEFASIATRLTPGEDYEVDEKKRTVGVLEPGIEKVEDYLGIDNLYESANTPLISFLNNSIKAVALFKRDKDYVVMNGEVLIVDEHTGRILMGRRYNEGIHQAIEAKEKVEVKAENQTLATVTLQNYFRLYQKLSGMTGTAETEAAEFMSTYKLGVVPIPTNKPMQRIDQTDLVYKNEKAKFEQVAEDIAERHEKGQPVLVGTTSVEKSEYLSKLLAKKGVKHEVLNAKNHAREAAIVAQAGRLGAVTVATNMAGRGTDIMLGGNSEFLAVQEMHAKGLSPTETPEEYEAAWDDVFDRVKAEIKDEADKVREVGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLTDDLMRLFNSGAAESLMGRSNVPDDLAIENKLVGRAIRSAQAQVEGRNAEIRKNVLKYDDVLNRQREAIYSDRRHILEGDDIHDRAQSFLKSVVDDVIDSRTAEGNADDWDLDAMWTELGTLYPISISIDEVITEAGSKGKASREFLGREILSDAKLAYQQREELLGDEAMRELERRVVLSVIDRRWRDHLYEMDYLKDGIGLRAMAQRDPLVEYQREGYALFQSMMGQIREESVGYLFNLEVQVQSDGENAVIEAKGLGEDEVSGLEYSAPSIDGEVEVRDERGRLEQAATARAQKAQAEAEAAAGPEQGSAFGNAATASGQAAAGNRAERRQAAKKG
>NZ_CP017580.1|WP_070418505.1|3085327_3086035_+|ribosome-associated-translation-inhibitor-RaiA
MDVTITGRNIGVTDRFRTYVEQKSEKIDVLADRALAFEVRISRHNEKSGGSQGEDRVELTLIGPGPLVRAESAASDKYAAFDLAFARIMERLRRARDRRKVHRGRHRPTSVSEASGTAFERMGVVPADGKLIEDVATGAVPVVDANAEDDENEVYSPVVIRHKVFEAGPMTVDDALYFMELVGHDFYLFVDAETHRPSVVYRRKGWDYGVIGIDDPSTEHAPAAASESEPAVAIA
>NZ_CP017580.1|WP_070418504.1|3084414_3085143_+|hypothetical-protein
MTTRDRLRPWLDAAVAVLGLFLPVDCVGCGRPDRALCAACRHALDAMPRRVRLVAGVRLDAAFEYTGLVRTMLLELKLRGRVDLARPLGARFGGLVRAALADAGPGAVLLRVPPSRQGARRRGFDPVVLLAARGGVRRSRAMSRVRAGGLVRRRAGVVAGVGAGAGVGVGAGAVRGGQKERSAVERVAATVGTLSVTGVAGRAVVVVDDVVTTGVTMAEAVRAVRAAGGRVVRCVAVASVDD
>NZ_CP017580.1|WP_070418503.1|3082636_3084319_+|GerMN-domain-containing-protein
MRTRFRTLVATVLAALTIVAVSACAAIPTDGAVRSGGVIKDQSVSGVDYRPGKPVPGADQTTILRGFIAAGTGAADDYAVAREFLASNFSTKWNPRRSVTIQPGNPAIERVGERELTYTLTASASVDADGEYTQAVRPTSSTLTFQFTREDGEWRIAYAPDGIILSPVNFESVFQQHALYFYDPTYKFLVPDERWFLARSSTSTRIASALLAGPASWLKGAVVTAFPEGTQLSLNAVTIQSGTALVDLSSDALRASSQDRIRMREQLSKSLASVATVSSVDITAEGTTFAVPDGSGSDAQQNPDVDARPLVDQDGTVGYSALGGGKIAPLGNGMGAEIGDLGPSSFALSASGTAAVVGNGDGVTVVRGRSHLRIDATDGLVPPSIDDLGFVWVASEKNTRRVTAYGLGGDPHAVNTTLPAGDLVSFQVSRDSTRALALIQTNDGPSLYVMAIVRGADRTPTALGSPVRVQAATGNAVGAAWISDSDVASVGQTSSGPDVVRSTIGGQSSTLPKPDGRATEIVGGSGGSMLLRMSDGSVLQSTGGGWVTTGISADVLGVQR
>NZ_CP017580.1|WP_070419519.1|3081062_3082637_+|HAMP-domain-containing-histidine-kinase
MWRRSLMFRSVAITVMTTGLAVAIIGTAVMISISNNVYSQRRDQIEAESARATIVAQGIFDAATAGEDNNQSELETLQSEAQQAILSNTTSPGGTSIAIERSPDQPGPQTVQNVASQGFPDAVITDALRKQVGKNTGTLSLQPVRLDDDGRHQPGLAVGSTLQIPSAGQYELYLVYDLSDAQQTLDFVSQTLSIGGVALMVLIALVTSLVVRLVVVPIRGAAETSRKIAAGRLDERIPVRGNDDIATLARSFNGMADAVSRQITQLAELSRVQQRFVSDVSHELRTPLTTIRLAGDMLFDSRHAFEPSVGRSAELLHAQVERFELLLADLLEISRFDAQAVHLDPEPVIPAALATDIVDEFRPLAERAGIDLQLATPGGHTTMQLDAKRIRRVLRNLVGNAIEHGDAKPVQVVVDSDARSVAIAVRDQGVGMPPEDAARVFDRFWRADPSRKRTIGGTGLGLAISLGDANLHGGRIDVWSRPGEGSTFVLTLPRNDRVTVTTSAIPLPDLDESYDGPRAVREDD
>NZ_CP017580.1|WP_070418502.1|3080274_3080949_+|response-regulator-transcription-factor
MTPRILVVDDDQALAEMIGIVLRSEGYEPEFSADGNDAIDAFHGTKPDLVLLDVMLPGIDGIEVCKRIRAESGTPIIMLTAKGDTSDVVAGLENGADDYVVKPFNPKELVARIRTRLRPTAADATVLHVGDLTVDVAGHEVRRGDAVIALTPLEFDLLRALSEKPNQVFTREMLLEQVWGYHYKADTRLVNVHVQRLRAKIEHDPDNPKIVTTVRGVGYRAGGA
>NZ_CP017580.1|WP_181015098.1|3078722_3080126_-|glycerophosphoryl-diester-phosphodiesterase-membrane-domain-containing-protein
MSDWQVPGAPGGPQDGRGNGPGGAARPPGQQPSAPWPGQSGGPGRPPGPPPAGSRPVIPLRPLGLGDVLSGAFTVFRRNARVLLLWSVLLSGVLGLLSTIASAFGQRAIQSRMLSAVDGDVDGQTSILAGSVTLWLVLSIGLPFLAYLGRGFLVAPVAADTGQRILGRRATFRGLWALLAGRRWSVVAWILLQLAAGAVIGIVFVLVLVGAAAGLSGNGSGIGGFLLTFFVLGLGFTVVLVWLGTKFAFTVPTIALEGRPVFQAAAQSWRLTRGAFWRTFGIILLVQVMFAFAVSIASVPLTIGATLVGGTFDPLGQTDAGSGAGVGGLVAIVVGSLLGIAVQCITDVLSASVVTFLAIDRRIRTEALDQRIASHLETGQPGDPFAPSPRVDRPAWPGQGQGWPGAGPGPQQPWPGPTWPGGGPGPQQPWPGQPWPGQPGAGGQQPGGPTPPQWGGEPGRYPPDGRA
>NZ_CP017580.1|WP_070418500.1|3078087_3078726_-|DUF4129-domain-containing-protein
MTIDPDDARRLLERELERSEYDGAHVTWWDRASRAVLDWLGSLRADGLGSPAVAHTLLWTAVVVLVAVVVLVVVARGLPRRRARLADGQVGGVFDDDDLRPAGAIAEDARAALRAGDWSRAVLDGYRALARGLGERDLVPDVPGATARAIAGRAAVVFPAEAARLERAAATFDEVRYLGADATERSARDVLDTEHAVRTARPARTTTPAVPA
>NZ_CP017580.1|WP_022904217.1|3091900_3092149_-|WhiB-family-transcriptional-regulator
MDWRDQAACLTADPELFFPVGNTGPAVDQIEKAKSVCARCTVTEMCLQYALENNQDSGVWGGLSEDERRALKRRAARARRAS
>NZ_CP017580.1|WP_083295296.1|3092409_3092832_+|hypothetical-protein
MPDTTPIEPDHVERRSPALLALLVVVGLEFAALVVVTIVLIVELIVAPATSIASGIALTVLAAIAALWLGSLFIGLRNRRPWVRSGIIVWQVLQGALAIGAFQGVFRVPAVGWFLLIPALLGITLVLSRPVTDALARPVE
>NZ_CP017580.1|WP_070418509.1|3092905_3093376_-|thioredoxin-dependent-thiol-peroxidase
MTDRLAAGDTAPDFTLPDQDGTEHSLSALRGKKVIVYFYPAASTPGCTTEACDFRDNMSSLQAAGYEVLGVSKDDLPALKTFQHEQALTFPLLTDPDLAVHKAYGAWGEKNNYGKIVTGTIRSTIVVDEDGTVQLPLYNVKATGHVASLRKKLGLV
>NZ_CP017580.1|WP_083295297.1|3093650_3094346_-|YigZ-family-protein
MVARAADEDLASLDGVSTPYPSTVAAPVEHEIVITKSRFITTVAPVSGVADADRVIAEVRRRRWDARHNCTAMVTGVLGDQARSSDDGEPSGTAGVPMLEVLRRRGLTDVVAVVTRYFGGVKLGAGGLVRAYSTSVSEALDRATLVHRRALTRVTVDVPHADAGRIDNVLRDWVRHHGATLGDPAYGAAATFELWVPGDGIEPLRADLAATSAGALDPVVGEERVVDVPAD
>NZ_CP017580.1|WP_070419521.1|3094385_3094826_+|hypothetical-protein
MATADPRGGVLDAAELARRLNLLLDFEEAQRGAPVPFAAIEEYVAAQGGSLSRAKWTYMLSGDGRRNRDTGLLRLLAGFFEVDERFLLEDSDVPERIGAQLALVRSLRSARVSGFAARTFPGELSPEALRRIAEVLEEESARGSVA
>NZ_CP017580.1|WP_022905932.1|3094822_3095290_+|ImmA/IrrE-family-metallo-endopeptidase
MSAPTDLVEAFWARGAAEGWSDVDQAVAAAAEVVGKPIVVREEAFLAAEPVCGFVATLERQHLVMISPTASRTFRSFVIGHELGHILHRHQDHAPQAAYIRDVIPDLPEYKVERALARGLFSNEYEHEAEVFADRLAGLIRGHRDRPSAFRGVFG
>NZ_CP017580.1|WP_070418511.1|3095286_3096213_+|hypothetical-protein
MIVSLVQALLLIAGTVTLFVLQRGQDRTLAVTFLLFAATIVTNVDPLYRWLDPLFGGFNVVTVVSDCLMVAGTSTLLWGVAKAVGAARPWLRNAIVATCAVVVVVVIVAFTVLDKPATTTTFMLDAGSHPAATVYSIAQTVYLGVALGATGLICVLHLREARTTTDLVGLWVLVLGGVLGVVRMVVVVVMDLAHVLGDLGLTRALALPYDVTTPGAVICVSSGMLLLVIGHQVSRRRRSRRVETALRALTPLHARIGTDNAYPDSGDPATRLSRLIVEINDGARRARQSLSESEQRVLADAEAALDAA
>NZ_CP017580.1|WP_070418512.1|3096420_3096633_+|hypothetical-protein
MTVFAALVLFIGAVFNVVTWPRFFQRVAKDSRARDAAGKPTTFYTVHLVLLLIALAIAVAAVVAGILLLV
>NZ_CP017580.1|WP_070418513.1|3096896_3097574_+|response-regulator-transcription-factor
MRVLVVDDEVRLADGVRRGLEAEGWAVDVAHDGVDGLWHAREFGYDAIVLDLMMPGLSGWAVCAHLRADGDWTPVLMLTAKDGEWDQVEALDAGADDYVTKPFSHPVLVARLRALVRRGARERPAVLTLGDLVVDPAARTVSRASTPVELTSREFAVLEFLARRAGEVCSKRDVIENVWDVDFDGDPNIVEVYVGHLRRKVDRPFGRTAIETVRGAGYRLAADGG
>NZ_CP017580.1|WP_070418514.1|3097566_3098910_+|HAMP-domain-containing-histidine-kinase
MADGGRRRFRSVRARTTLGAVVVVLAALLVGAAAFVVVLRLVLLDGVRTTAESGLEQASARVEADGAGVVSGYEDVLVQVVGDDGSVLAHGDDADPPALPTADESRWTHDGERWLLVADDVDLPGGGDATLVYGVSLDQTDAAVGAAVALLAVGVPVLVLVMGAVTWVVTGRSLRPVERMRTEVETIRAARPDARVAVPDTGDEIARLATTMNTMLDRLDRSAAGQRRFVSDASHELRSPIATIRQHAEVAAAHPDRADVVELSEVVRSEALRLQDLVTGLLELSRLDEGDVGVRRPVDLDDLALDAVARARGRLGGSTDGSIRVEGSGIGPARVLGDEGLLAAVVRNLVDNAVRHAEGRVVVALAEQDGRAVLTVDDDGAGIAPADRDRVFERLVRLDEARSRDAGGAGLGLAIVQDAVRAHGGDVVVTDSPLGGARFAVRIALGG

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Crispr_ID: NZ_CP017580_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017580_7

3222583-3222696

Orphan

Consensus_repeat	Method
GTGCGACATCGCCGAGGTCGTACGACAGCGACGATGTCGTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017580_7

>merge|NZ_CP017580|7|3222583-3222696|CRISPRCasFinder
GTGCGACATCGCCGAGGTCGTACGACAGCGACGATGTCGTTCGTTGCGCGTGCAACGGTTGCGGGCGCGCGGGTGCGACATCGCCGAGGTCGTACGACAGCGACGATGTCGTTC

>NZ_CP017580|7|7|3222583-3222696|CRISPRCasFinder
GTGCGACATCGCCGAGGTCGTACGACAGCGACGATGTCGTTC	GTTGCGCGTGCAACGGTTGCGGGCGCGCGG
GTGCGACATCGCCGAGGTCGTACGACAGCGACGATGTCGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017580.1\|WP_156794947.1\|3225935_3226622_-\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|365866
NZ_CP017580.1\|WP_070418614.1\|3231931_3232789_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237907
NZ_CP017580.1\|WP_070418608.1\|3224910_3225783_-\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|366777
NZ_CP017580.1\|WP_070418604.1\|3220178_3220637_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP017580.1\|WP_070418606.1\|3221255_3222449_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173840
NZ_CP017580.1\|WP_070418601.1\|3214900_3215803_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP017580.1\|WP_070418600.1\|3212792_3214691_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP017580.1\|WP_070418598.1\|3209959_3211591_-\|putative-Ig-domain-containing-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP017580.1\|WP_070418602.1\|3215884_3219343_+\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143443
NZ_CP017580.1\|WP_070418611.1\|3227919_3228948_-\|NADPH:quinone-reductase	unknown	unknown	gnl\|CDD\|176215
NZ_CP017580.1\|WP_070418613.1\|3229454_3230102_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|225462
NZ_CP017580.1\|WP_070418612.1\|3228992_3229361_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP017580.1\|WP_070418599.1\|3211791_3212625_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_083403507.1\|3230462_3231788_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP017580.1\|WP_070418607.1\|3222738_3224850_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP017580.1\|WP_070418603.1\|3219581_3220022_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP017580.1\|WP_156794883.1\|3220041_3220191_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070418610.1\|3226798_3227626_+\|GAF-domain-containing-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_022907754.1\|3227667_3227853_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017580.1\|WP_070418605.1\|3220633_3221209_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376024

Protein	Function_ID	Function_description	E-value
NZ_CP017580.1\|WP_156794947.1\|3225935_3226622_-\|trypsin-like-serine-protease	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	7.17217e-18
NZ_CP017580.1\|WP_070418614.1\|3231931_3232789_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|237907	PRK15092, PRK15092, DNA-binding transcriptional repressor LrhA; Provisional.	1.49211e-42
NZ_CP017580.1\|WP_070418608.1\|3224910_3225783_-\|patatin-like-phospholipase-family-protein	gnl\|CDD\|366777	pfam01734, Patatin, Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.	3.36662e-21
NZ_CP017580.1\|WP_070418600.1\|3212792_3214691_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	9.856e-07
NZ_CP017580.1\|WP_070418606.1\|3221255_3222449_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173840	cd01151, GCD, Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.	5.9765e-135
NZ_CP017580.1\|WP_070418601.1\|3214900_3215803_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.82722e-30
NZ_CP017580.1\|WP_070418598.1\|3209959_3211591_-\|putative-Ig-domain-containing-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	8.52801e-07
NZ_CP017580.1\|WP_070418602.1\|3215884_3219343_+\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|143443	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.	3.72317e-180
NZ_CP017580.1\|WP_070418611.1\|3227919_3228948_-\|NADPH:quinone-reductase	gnl\|CDD\|176215	cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.54126e-124
NZ_CP017580.1\|WP_070418613.1\|3229454_3230102_+\|NAD(P)H-binding-protein	gnl\|CDD\|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	2.81452e-58
NZ_CP017580.1\|WP_070418604.1\|3220178_3220637_-\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.09046e-24
NZ_CP017580.1\|WP_070418607.1\|3222738_3224850_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	2.13749e-64
NZ_CP017580.1\|WP_070418603.1\|3219581_3220022_+\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	2.39973e-08
NZ_CP017580.1\|WP_070418612.1\|3228992_3229361_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	2.03879e-39
NZ_CP017580.1\|WP_083403507.1\|3230462_3231788_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.8821e-62
NZ_CP017580.1\|WP_070418605.1\|3220633_3221209_-\|hypothetical-protein	gnl\|CDD\|376024	pfam18598, TetR_C_36, Tetracyclin repressor-like, C-terminal domain. This is a C-terminal TetR regulatory domain found in QsdR proteins (quorum-sensing degradation regulation).	7.14973e-38

>NZ_CP017580.1|WP_070418606.1|3221255_3222449_+|acyl-CoA-dehydrogenase-family-protein
MSLTTAIPVLLESDFYRFQEGLTDQERESLGRLRTYLESDVRPIADEYWARAEFPMQVITPLSELGMYGPGIPLVRQFENSAVYRGWAALELGRVDASVATFIGVQSGLAMNSIAVAGSDEQQQEWLPRMASGELVGAFGLTEPLSGSDSARGLRTTARREGDTWVLDGEKRWIGNATFADVVVIWAKDVADGQVKGFLVTTDTPGFTATKIEDKIALRGVQNADIVMTGVRVPESRRLQHADSFRATAEVLRLTRTEVAWQAIGIAVGAYEAALDYARSRVQFGKPIAAHQMVQDLLVKSLANITASIALCTQASAMQDAGTGADEHSAMAKAFATAKMRETVGWCREVQGGNGIVLQKGVARFFADAEAIYSYEGTREVNTLIVGRAITGQAAFV
>NZ_CP017580.1|WP_070418605.1|3220633_3221209_-|hypothetical-protein
MYTSDSALRAFREARHTFIAGSRIDMGALATSLGVDRTSLFRWVGNRDRLLSEVLWSLAVPTFDAAAAAAAPAGAPRIIDVLDRFTADLIDAPYFRSFLTREPARALRLLTTTESDVQSRFVGRVTALVEEQRVAGAFDPTPLSAEELARLLVRISESFTYADLISGQTPDPERARATFEYVLRPTTTGVR
>NZ_CP017580.1|WP_070418604.1|3220178_3220637_-|acyl-CoA-thioesterase
MTIADYPFVRLYPTRWNDNDMFGHVNNTIYYSAMDNAATYWFREEAGLDPFASEWIAVLVSSSCRFVESAVWPDVIEVGMRSKHLGNTSLSWEFGLFRQSDGALLATGEFAHVIIDREGARRPIPLPNDLRELVTATMATPAPSPEPEPQGR
>NZ_CP017580.1|WP_156794883.1|3220041_3220191_+|hypothetical-protein
MRIVRVIGRGIGFVLSTIVKVIGTRNGHDPAGDDLAVRLNNPRREDYRP
>NZ_CP017580.1|WP_070418603.1|3219581_3220022_+|VOC-family-protein
MTEPFARPTALAHVRVTVTDIHRSKAFYQQLLGTDPAIDFSDQVDEPGVREDRERFYGGSVFRLGDQVFGLRPVAPAGQRFDSETVGLDHVSFVVGSVDELHEAAARLDAAGVEHGEVTDLGDAGMVILSVQDPDDINLELAALKG
>NZ_CP017580.1|WP_070418602.1|3215884_3219343_+|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MTTLHEHPATDHDALADQSVALVRQWLAEAETYPVDGSAKQLAGVLADPAGLDFAVGFVDGVVRPEDLGVAARKLRAIAPGAPGFLPAALRGLVRLGGGMAPALPGVVVPIARRVLRDMVGHLIVDATDAKLGPAIAKIKRDGVRLNVNLLGEAVLGEGEAARRLEGTHKLLARDDVDYVSIKVSSTVHPHSPWAFDHAVEDIIEKLRPLFRRAASASPAKFINLDMEEYKDLDLTIAVFTKLLDEPEFLGLEAGIVLQAYLPDALAAMEHLQEWSAARRARGGAGIKVRLVKGANLPMEQVEASVHGWPLATWHTKQDSDTNYKRVLDWALTPSRIENVRVGVAGHNLFDVAHAWLLAGERGVRDGIEFEMLLGMAQGQASAVKNTVGSLLLYTPVVHPQEFDVAIAYLIRRLEEGASQENFMSAVFSLVSSPALFAREEERFRTSLAPLAQPGGLDAPASHRVADRYAAVGRPGPGHFENTPDSDPSVAAVRSWGAAITDRVASSTLGVRAVQEARVDSATALDTALGRVRDAGAVWGTWSGAARGAVLHAVGDALEANRAALVEVMASETGKTIDQADPEVSEAIDFAHFYGSLASELDEVDGASFTPAALTLVAPPWNFPVAIPAGSTLAALAAGSAVVLKPAPPAERSGAVLASIIETALDAMGAPADVLAFLQVSENDLGQQLVASPLVDRVILTGAYETASLFRSFRPDLPLLAETSGKNAIIVTPSADLDLAVKDVVASAFGHAGQKCSAASLVVLVGSVATSRRFRSQLMDAVSSLTVGYPTDPTTQMGPVIEPAAGKLLDGLTTLGAGESWAVQPAKLDDSGTLWSPGVRDGVRRGSAFHRTEYFGPILGIMTARTLDEAIDIVNEVDYGLTSGLHSLDRAEIGTWLGRIEAGNLYVNRGITGAIVRRQPFGGWKKSAVGAGTKAGGLNYLLGLGSWAPAPAVSGSSPSSAVAAFVRAAGVESPSLDRAVASDEQAWASLFGTATDVSALTAERNIARYLPYPAVRVRLASSSADGVADLVRVIAAAVRAGTTIDVSTVSTLPTGVASAVRALPSVRSLTQSHSDAAFASAVASGPSGRVRLIGGDTSALYTAIGGRPDVAVYGEPVTEAGRLEILPFVREQAVSITAHRFGTPNHLTDDLI
>NZ_CP017580.1|WP_070418601.1|3214900_3215803_-|LysR-family-transcriptional-regulator
MLDVRRLVLLRELSIRGTIAAVAEAVNFTPSAVSQQLSALEREAGVPLLRKAGRRLQLTPQAEVLVQAAGHVLDVLERAQSEVEETMPTVQGRIRVAVFQSAALALMPNALHAMATEHPDVRIEMVQREPETALHETWIRDFDMVIAEQYPAHAAPRLPGLQREDLTTDAVRLALPPVDTALAPVSSIEDAAALPWVMEPRGTASRHFAEQVCRRWGFEPDVRYETADLQTQIRLVESGNAASLMPDLMWTGRTTTCRLVELPEHPRRTIFTVVRAAGSSSPAVRALRSALERAAATVGD
>NZ_CP017580.1|WP_070418600.1|3212792_3214691_-|hypothetical-protein
MKQSCTASVRRGAAIGAAVAIVTASSAFGIGATSAMADEAPTQLTPATTVTTGTSDGSGGAASDLTSATADETGTTPPVVTDDPAESPEPVPTSDPTTDPTAAPEPSAPAIAPAASAPAEDAPEQSAAAALAFPEGMSADAPLVLTATVGDTVSRTFTATGGSGTVTYEVRGANGSPVIGQGDFNSDFSFDGTTGTLSGSPRYALRTYTFQVIATSGSETAIEYVELTVKPGAPVGVTFSVAAPGTAGLWQVEPDGTIWEEAAGKGRVRIVSDVPVATGTTLSLAGLAVDAYGNRVTGSDQDDDYPRSTVTSTVASDRAVWDPAGANLVTFTEAGTRTVTVSEGGVSTSFTVVVTDEPFAFVDPSSADAPIAIAPTAGEQFTRTFDVSGATDPSDLRYELRGVQGEPFDETYARNGLDLAIDPTTGVLTGTGTAATSFRFQVVATSGGQEAVANVEVTVSPAAFAKLVVAVLPSDRDPESETWSVDGDTITHINPDGGSEVVDAVPARQGQRMLVLAVPVDAYGNAVADHDDLTITSDVASDRIAYDPSTAATWVTFEHASPHVVTVAYQDRTQDIRFDVTPTAATAGATTNTGSGRLAYTGAETSGPLAWALGLLAAGGGLLVHRLRRRRA
>NZ_CP017580.1|WP_070418599.1|3211791_3212625_-|hypothetical-protein
MNATTPSRRRAAIVTAVAVAVAAAGSTAVLGVDAASASTTVTSQHAAATPAPLAFTQSSSAAHPIALTATAGKAFAHTFTTNAKAGSVAYAMDEPAGLTPDSPRASDHFSVNTNTGVLSGTGVESGIWDFQVVALRNGVEAHAYVQLTVLPGAAVGVRTYVSQPNTTAPIWYIAPNGVIRQRLTPTSKATVVKTVPAVRLEQLIVTGVAVDAEGNVIKAPDEGGDVSTVTSNVTSDHVTRTGAQDTITISGAWSHRLTVTQEHAHTSFTVSVAHAAH
>NZ_CP017580.1|WP_070418598.1|3209959_3211591_-|putative-Ig-domain-containing-protein
MRRSTSTVRRACALGTTAALIALTTGLGIATATAAHAEGADTSVPTQTAPADPTPTDAPTDTTPTDAPTDPAPTDAPTDTATDAPTSTPTSTTAPSAPARNQTPSAASTDAPVTPLAADPAVTVSGDTKVGSQLTADTTGFDEDGSFKYVWTEADAGPTPTTIAKTKTFTVDQTEAGKQLVVTVTGDLPGGGKETVTSDPSAVITQDPVFVDADGKPITEGTEADVDVLPLEATAGDPFSYTFRAQGYPAPTYKLDWYYGDEEDSADSIVESKSQADSIAIGYGFEEDDDFTVDDQLPEGITFDPTTGELSGTATLASFYDFAVTATSGDVSTTQYVELTVDHAAAFGITAFTTDEKSITARDKRIWLIQPDGSIYTVDLSTDEDGFPEELTLTPTGRPTVAQGGTLIVSGSPVDRFGNDASDFDDEGNPTFVPTVTSNVATDVVAPYEENGAEGQGVFGVTFPHASIHTLTVASGALQPLSFAVDVRPTTPTVAVVTPTTAKGQLAYTGSDATGALPWALALVIAGAGLIGVRTLRRRHAQR
>NZ_CP017580.1|WP_070418607.1|3222738_3224850_-|S9-family-peptidase
MTTPFSDLDQYTALPRVDGIAVSPDGSRVALTVSVLDADGTGYRRSVWAVPGTSDAAAAPVRLTRSAKGEGGVSFTRTGDLLFVSGRPDGDGDKDSDAAQLWVLPAAGGEARPVTKLAGGVGGVLGAASHTDTVAVTAGLLPGAGTDRTGVVAADAELRGRRKDRKVQAILHETYPVRFWDHDLGPDETHVLTLDLGTLQEKATTPSATAADPSDDEAGPSYPTHLPVLTDLTPAPGRSLEHVDGVVTPDGSVVVTTVGVQEARGSRSTIVAFDVATGTRTVLLDDPDVDHEMPTISHDGRTLAWVRTERFTPRGATEQEIWVARLEGSALSDARRIAVEWDRWPNELVFARDDGALLATADHDGRAPVFRLPLDGGAVEQLTHDDWAYSSLRVAAVSGTVVALRASWAAPLHPVRIEADGTVTTLATPAQLPEVPGHLEEVETTAADGSRVRGWLLLPNDDAGTAPHPLLLWIHGGPLNSWNQWSWRWNPQLAAARGYAVLLPDPALSTGYGLDFINRGWNAWGQAPFTDLMAITDVVVARDDVDETRTAAMGGSFGGYMANWVAGHTDRFRAIVTHASLWALDQFNGTTDMSQYWQSIFDETGLHENDPHRFVADITSPMLVIHGDKDYRVPIGEGLRLWSELAEHHAADDGTMPHRFLYFPDENHWVLKPQHSVVWYETVFAFLEQHVLGGEWRRPELLG
>NZ_CP017580.1|WP_070418608.1|3224910_3225783_-|patatin-like-phospholipase-family-protein
MTDVSTPAPGTRALVLGGGGVAGIAWELGVLSALQDAGVDLDAADLVVGSSAGSVVGTFVRYGAVQQAYDQQHAAVPTTYEEPVPIDGEDFQQRIGAVLEGASSDQDARARLGLLAQRTTDGQTDDERTATFTETLPSTEWPAKPLALTAIDATDGTFRVLTATDAVPLPRAVAASCSVPLVWSPVGIEGRPYVDGGMRSATNADVAAGYERVLVIACGPEGPSPLGPWLDVAVEGLRAAGSSVEVVVADSTSQQAFGTNSLSLSTQAPAADAGRTQGAAVAEGIAAFWA
>NZ_CP017580.1|WP_156794947.1|3225935_3226622_-|trypsin-like-serine-protease
MTLLGGGLGATAASAATVSPQVIGGEQAPSTPWEVQLVFQQGGTGTYGCTGEQLNASWVLTAEHCVDGTTAMNVYHSNSTTNRGAATAADRLYSAPSGDIALVHLSTPKALSSYAPLDLAYTTKSSGTGTVLGYGNRANSVPTTGLYQATVNLTGSSTDAYGGRAQHVTGVTGASNHGDSGGALVVNGKVVGVCSTGDVADPGSDIHAGSNYAVLTQSASWIRSTAGV
>NZ_CP017580.1|WP_070418610.1|3226798_3227626_+|GAF-domain-containing-protein
MTGDQATTGRGRRRAGAVVWPIVVATAPTAAFQLPNLVVAPGVKVSLVVFGLVVLAAAVVVQVVRARRAEASVTAAAAVARSTELEQGTAVRYAFGQLATRLARFAELRRRDRRQELPAFADRVAVALAFYLLPGVPDVRANVYQLSEDLRGLEPIGHGGAEDTAGVFRAGTPYGDRNLDWVLVGGGPRVVGDRATDVDADEDLPGFEPRYRSYVSVVIRSEEYSFGMLTVDSPVPDAFTDLDAKYVALMASFMAIAFSLATPFPDRDRNRRKGP
>NZ_CP017580.1|WP_022907754.1|3227667_3227853_+|hypothetical-protein
MTIVTPEPKPFGRSRVYTPNWTDDTTDADYEDLEVIAANIERERVAARRRFEARLAAALAR
>NZ_CP017580.1|WP_070418611.1|3227919_3228948_-|NADPH:quinone-reductase
MRSVVYSKPGDSSVLTLEERPIPDPGPGEVRVRVVVSGVNPTDWKARAGGTYGDGLPFPEITPNQDGAGVVDAVGEGVDGLSVGDHVWLYMAAASRPTGTAQEYTVLPAARAVPLPEGTSFDVGASLGVPAMTAHRALTTHEHGPDRLAPGALDGKTVLVAGGAGAVGHAAIQLARWAGATVLTTISSDAKAALATAAGAHHTVNYRDEDAGARIREIAPDGVDIVVEVSIPQNAGLVAEVLANHGVVSIYANNGGDEATLPIRPNMSVNARYQFLLLYTIGDEALAAAAEDVTAALRDGVLPVGEDAGLPLVRFALEDTAAAHDAVEQDTVGKVLIDVSAE
>NZ_CP017580.1|WP_070418612.1|3228992_3229361_-|helix-turn-helix-transcriptional-regulator
MSALEYSPYAAECPSRQLLDRIGDRWSVLTIGTLADGPARYSAIATRVQGVSQKMLTQTLRALERDGLVTRTVFPEIPPHVEYELTDRGRSLREVLKPLEDWATSHMDDVAVSREQYDTRPR
>NZ_CP017580.1|WP_070418613.1|3229454_3230102_+|NAD(P)H-binding-protein
MTSIVVFGGTGYAGSAITREALSRGIAVTAVARDTSKLEPAEGLTLAQGDAFDTDFVAEVTKGADVIVVALHAVQADGSELKDAFQPFVDAAAAAGARLGIVGGAGSLLVAEGGPALYDTAEFPDAFKGEAKSHGQVLEALRASDTDVDWFYVSPAAAFGGYNPGERRGTYRTTDDVLLTDADGNSDISGEDFAIAFVDEIASPAHHQARFGVAY
>NZ_CP017580.1|WP_083403507.1|3230462_3231788_-|MFS-transporter
MSASSTTLPPPTEPLPIQATRPPWRHTLIALSVPNFRLFTATNLVAMTAGWMQRIAQDWLVLQLTGSVAQVGITVACQFAPMLLFGLLGGVLVDRFSKRALMMITQGSFAVLSALLAVLTLSGVVQAWHIWAIAFVVGMVTVIDNPARQVFVTEIVGHEHLRNAISVNSSVFQLGGMIGPALSGALLVAVGAGWSFGVNAIACVAVVVTLGFLKVSELHRTPPAPRGKGQLVEGLRYAVRKPTIIVPVILVAFFSVFALTMPVLLSAFASEVYDVGAGGYGVFNSAVAIGALAGALLSTRRATVRLRTIVGGVFWTGILLVVSGSIPVIAPFTVALVAVGMSQLLFQTASNSLVQLSSNVAIRGRVMSLYVLVLLGGQAIGGPLMGQVVDHFGAHVGMVVAGGVPAAAAAVVGLVLARRGGLHLAVRMRHHMPVPSIVGHR
>NZ_CP017580.1|WP_070418614.1|3231931_3232789_+|LysR-family-transcriptional-regulator
MLDPVLLQTFLAVAETGSFTQAGARLGISQPTVSQHVRRLETAVSRTLVARDTRGVALTDNGDAMAGFARTILAAHATADAYFSGAATRGRLRFGAADDLAITQLPRILRDFRRLHPQVNLELTVNQSSPLLRRVHAGQLDLVFIKQTAGESAEGTRVATDQMVWMAQDGIALEPGEPVPLIAYQAPSISRQMAIDALESAGRTWRITCNTRDVNGVLAAVRAGIGVAVFPHSLIPADLVKVSQRLALPDLPAVDYVLIANPTVQREPIDALTNAILSRGVVRAV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017580_7	7.1\|3222625\|30\|NZ_CP017580\|CRISPRCasFinder	3222625-3222654	30	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1847567-1847596	5	0.833
NZ_CP017580_4	4.1\|1226615\|32\|NZ_CP017580\|CRISPRCasFinder	1226615-1226646	32	NZ_CP042825	Rhizobium sp. WL3 plasmid unnamed2, complete sequence	202240-202271	9	0.719
NZ_CP017580_7	7.1\|3222625\|30\|NZ_CP017580\|CRISPRCasFinder	3222625-3222654	30	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1832059-1832088	9	0.7
NZ_CP017580_4	4.1\|1226615\|32\|NZ_CP017580\|CRISPRCasFinder	1226615-1226646	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	2293023-2293054	10	0.688
NZ_CP017580_4	4.1\|1226615\|32\|NZ_CP017580\|CRISPRCasFinder	1226615-1226646	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	308892-308923	10	0.688
NZ_CP017580_4	4.1\|1226615\|32\|NZ_CP017580\|CRISPRCasFinder	1226615-1226646	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	315091-315122	10	0.688
NZ_CP017580_4	4.1\|1226615\|32\|NZ_CP017580\|CRISPRCasFinder	1226615-1226646	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	2035946-2035977	10	0.688
NZ_CP017580_4	4.1\|1226615\|32\|NZ_CP017580\|CRISPRCasFinder	1226615-1226646	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1859064-1859095	10	0.688
NZ_CP017580_4	4.1\|1226615\|32\|NZ_CP017580\|CRISPRCasFinder	1226615-1226646	32	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	1405073-1405104	10	0.688
NZ_CP017580_4	4.1\|1226615\|32\|NZ_CP017580\|CRISPRCasFinder	1226615-1226646	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	145339-145370	10	0.688

1. spacer 7.1|3222625|30|NZ_CP017580|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 5, identity: 0.833

-gttgcgcgtgcaacggttgcgggcgcgcgg	CRISPR spacer
cgccgc-cgtgcagcggttgcgggcgcgcgc	Protospacer
 *..** ******.****************

2. spacer 4.1|1226615|32|NZ_CP017580|CRISPRCasFinder matches to NZ_CP042825 (Rhizobium sp. WL3 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gcccaggccggtcccgcccgctcgagcgcccg	CRISPR spacer
tcggaagccggtcccgcccgatcgagagcagc	Protospacer
 *  *.************** ***** **

3. spacer 7.1|3222625|30|NZ_CP017580|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.7

gttgcgcgtgcaacggttgcgggcgcgcgg	CRISPR spacer
gccccgcctgcaacggttgcgggcgtcaat	Protospacer
*.. *** *****************.  .

4. spacer 4.1|1226615|32|NZ_CP017580|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 10, identity: 0.688

gcccaggccggtcccgcccgctcgagcgcccg	CRISPR spacer
ttttcgtccggtcccggcggctcgagcgccgc	Protospacer
 ... * ********* * ***********

5. spacer 4.1|1226615|32|NZ_CP017580|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.688

gcccaggccggtcccgcccgctcgagcgcccg	CRISPR spacer
ttttcgtccggtcccggcggctcgagcgccgc	Protospacer
 ... * ********* * ***********

6. spacer 4.1|1226615|32|NZ_CP017580|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 10, identity: 0.688

gcccaggccggtcccgcccgctcgagcgcccg	CRISPR spacer
ttttcgtccggtcccggcggctcgagcgccgc	Protospacer
 ... * ********* * ***********

7. spacer 4.1|1226615|32|NZ_CP017580|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.688

gcccaggccggtcccgcccgctcgagcgcccg	CRISPR spacer
ttttcgtccggtcccggcggctcgagcgccgc	Protospacer
 ... * ********* * ***********

8. spacer 4.1|1226615|32|NZ_CP017580|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 10, identity: 0.688

gcccaggccggtcccgcccgctcgagcgcccg	CRISPR spacer
ttttcgtccggtcccggcggctcgagcgccgc	Protospacer
 ... * ********* * ***********

9. spacer 4.1|1226615|32|NZ_CP017580|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 10, identity: 0.688

gcccaggccggtcccgcccgctcgagcgcccg	CRISPR spacer
ttttcgtccggtcccggcggctcgagcgccgc	Protospacer
 ... * ********* * ***********

10. spacer 4.1|1226615|32|NZ_CP017580|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 10, identity: 0.688

gcccaggccggtcccgcccgctcgagcgcccg	CRISPR spacer
ttttcgtccggtcccggcggctcgagcgccgc	Protospacer
 ... * ********* * ***********

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage